Citrus Sinensis ID: 002398
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SX33 | 1200 | Putative phospholipid-tra | yes | no | 0.973 | 0.752 | 0.733 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.988 | 0.774 | 0.727 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.979 | 0.756 | 0.722 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.989 | 0.763 | 0.713 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.985 | 0.769 | 0.669 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.963 | 0.719 | 0.597 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.968 | 0.725 | 0.586 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.975 | 0.736 | 0.596 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.974 | 0.743 | 0.592 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.926 | 0.708 | 0.509 | 0.0 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1434 bits (3712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/923 (73%), Positives = 794/923 (86%), Gaps = 20/923 (2%)
Query: 10 HFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLAT 69
S+++ +C + FK DHS IGGPGFSRVV+CN+P+S EA NYS NYVRTTKYTLAT
Sbjct: 14 QLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTKYTLAT 73
Query: 70 FFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRK 129
F PK+LFEQFRRVAN YFL+ +L+FTPL+PY+A S ++PL+ VIGATM KE +EDWRR+
Sbjct: 74 FLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVEDWRRQ 133
Query: 130 KQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYV 189
KQD EVNNRKVKVH G+G+FD +W+ L +GD+VKVEK+EFFPADL+LLSSSYE+AICYV
Sbjct: 134 KQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYEDAICYV 193
Query: 190 ETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYP 249
ET NLDGETNLK+KQ L+ TS++ ++ NF+ F+A ++CEDPNANLY+FVG++EL+ +YP
Sbjct: 194 ETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYP 253
Query: 250 LTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGI 309
L+PQQLLLRDSKLRNTD I+GAVIFTG DTKV QNST PPSKRS +E++MDKIIY +F +
Sbjct: 254 LSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFM 313
Query: 310 LVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYG 369
++ M+FIGS+ FG+ TR+DL+DG MKRWYLRPD ++ ++DPKRA VAA+ HFLTA+MLY
Sbjct: 314 VITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYS 373
Query: 370 YLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTG 429
Y IPISLYVSIEIVK+LQSIFINQD+HMYYEE DKPARARTSNLNEELGQVDTILSDKTG
Sbjct: 374 YFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTG 433
Query: 430 TLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL--------------EEEVTEEQ 475
TLTCNSMEFIKCS+AGT+YGRGVTEVE AM RRKG PL +E +TEE
Sbjct: 434 TLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEE- 492
Query: 476 EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAES 535
+++KGFNF DERIMNG+WV E HADVIQKF RLLA+CHT +PEVDE+ KISYEAES
Sbjct: 493 ---STVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAES 549
Query: 536 PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595
PDEAAFVIAARELGFEF+ RTQT+ISV ELD V+G +VER Y +LNVLEF+S+RKRMSVI
Sbjct: 550 PDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVI 609
Query: 596 VRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKE 655
V+ E+G LLLL KGAD+VMFERL++NGREFEE+T++H+NEYADAGLRTLILAYRELDEKE
Sbjct: 610 VQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKE 669
Query: 656 YKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 715
YK FNE +EAK+SVSADRE L EE+ EKIEK+LILLGATAVEDKLQNGVP+CIDKLAQA
Sbjct: 670 YKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQA 729
Query: 716 GIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 775
GIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETPE ++LEK+ +K A A K +
Sbjct: 730 GIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKEN 789
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
VL Q+I GK L S + ALIIDGKSL YAL+DD+K +FLELA+ CASVICCRSSP
Sbjct: 790 VLSQIINGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSP 847
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKALVTRLVK+ TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR
Sbjct: 848 KQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 907
Query: 896 FLERLLLVHGHWCYRRISSMVCF 918
+LERLLLVHGHWCYRRIS+M+C+
Sbjct: 908 YLERLLLVHGHWCYRRISTMICY 930
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1401 bits (3627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/924 (72%), Positives = 786/924 (85%), Gaps = 7/924 (0%)
Query: 1 MAGNRRK-KHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNY 59
++G RRK K S++ + K FK DHS IG GFSRVV CN P+S EA NY NY
Sbjct: 4 VSGRRRKRKIQLSKLFTLTGAKACFKPDHSKIGRSGFSRVVFCNQPDSPEAESRNYCDNY 63
Query: 60 VRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMG 119
VRTTKYTLATF PK+LFEQFRRVAN YFL+ ILSFTPL+PY+AVS ++PL VI ATM
Sbjct: 64 VRTTKYTLATFLPKSLFEQFRRVANFYFLVVGILSFTPLAPYTAVSAIVPLTFVILATMF 123
Query: 120 KEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS 179
KE +EDWRRK+QDIEVNNRKV+VH G G FD +W+ L+VGD++KVEK+EFFPADL+LLS
Sbjct: 124 KEGVEDWRRKQQDIEVNNRKVRVHRGNGNFDLREWKTLRVGDILKVEKNEFFPADLVLLS 183
Query: 180 SSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVG 239
SSYE+A+CYVET NLDGETNLKLKQ L+ T ++ E+ NF++F+A I+CEDPNANLY+FVG
Sbjct: 184 SSYEDAVCYVETMNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVG 243
Query: 240 SLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM 299
+++L+ ++YPL+PQQLLLR SKLRNTD IYG VIFTG DTKV QNST PPSKRS +ER+M
Sbjct: 244 TMDLKGEKYPLSPQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKM 303
Query: 300 DKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359
DKIIY +F ++ ++F GS+ FGI TR+D Q+G M+RWYL+PDD++ ++DPKRA +AA+
Sbjct: 304 DKIIYLMFLMVFSLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIY 363
Query: 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQ 419
HFLTALML Y IPISLYVSIEIVK+LQSIFINQD+HMYYEE DKPA ARTSNLNEELGQ
Sbjct: 364 HFLTALMLNSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQ 423
Query: 420 VDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 479
V TILSDKTGTLTCNSMEFIKCSIAGT+YGRGVTEVE AM +RKGS L + + A
Sbjct: 424 VGTILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSALVNQSNGNSTEDA 483
Query: 480 -----SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
++KGFNF DERIM+G+WV E HADVIQKF +LLA+CHT +PEVDE+ GKISYEAE
Sbjct: 484 VAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKISYEAE 543
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
SPDEAAFVIAARELGFEF+ RTQT+ISV ELD VTG +VER YS+LNVLEFSSS+KRMSV
Sbjct: 544 SPDEAAFVIAARELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKKRMSV 603
Query: 595 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654
IV+ ++G LLLL KGADSVMFERL+E+GR++E++T++H+NEYADAGLRTLILAYRELDE
Sbjct: 604 IVQDQDGKLLLLCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDEN 663
Query: 655 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 714
EY+ F E +EAKNSVSADRE L +E+ EKIEKNL+LLGATAVEDKLQNGVP+CI+KLAQ
Sbjct: 664 EYEVFTERISEAKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCINKLAQ 723
Query: 715 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 774
AGIK+WVLTGDKMETAINIGFACSLLR+ M+Q+II+ ETPE + LEKS +K A AALK
Sbjct: 724 AGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKD-AIAALKE 782
Query: 775 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS 834
+VLHQ+ GK L +S + ALIIDGKSL YALE+D+K +FLELAIGCASVICCRSS
Sbjct: 783 NVLHQITSGKAQLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVICCRSS 842
Query: 835 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894
PKQKALVTRLVKT + TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF
Sbjct: 843 PKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 902
Query: 895 RFLERLLLVHGHWCYRRISSMVCF 918
R+LERLLLVHGHWCYRRIS M+C+
Sbjct: 903 RYLERLLLVHGHWCYRRISKMICY 926
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1396 bits (3613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/914 (72%), Positives = 786/914 (85%), Gaps = 5/914 (0%)
Query: 10 HFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLAT 69
H S+I++++CGK+SF+ DHS IGGPGFSRVV+CN+P S A NY+GNYVR+TKYT+A+
Sbjct: 12 HLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGNYVRSTKYTVAS 71
Query: 70 FFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRK 129
FFPK+LFEQFRRVAN YFL+ ILS T LSPY AVS +LPL +VI ATM KE +EDWRRK
Sbjct: 72 FFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATMVKEGIEDWRRK 131
Query: 130 KQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYV 189
+QDIEVNNRKVKVH G G F +WR+L+VGD+V+VEKDEFFPADL+LLSSSYE+++CYV
Sbjct: 132 QQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCYV 191
Query: 190 ETTNLDGETNLKLKQALDATSNM-HEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQY 248
ET NLDGETNLK+KQ L+ATS++ ++DS+F++F+ ++RCEDPN NLY FVG+L LEE+++
Sbjct: 192 ETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERF 251
Query: 249 PLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFG 308
PL+ QQ+LLRDSKLRNT+ +YGAV+FTG DTKV QNST PPSKRS++ER MDKIIY +FG
Sbjct: 252 PLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFG 311
Query: 309 ILVLMSFIGSIFFGIATRED-LQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALML 367
++ LMSF+GSI FG+ TRED +++G+ +RWYL+PDD ++DP+RA +AA+ HF TA ML
Sbjct: 312 LVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATML 371
Query: 368 YGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDK 427
Y Y IPISLYVSIEIVK+LQSIFIN+D+HMYYEETDKPA+ARTSNLNEELG VDTILSDK
Sbjct: 372 YSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDK 431
Query: 428 TGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA-RRKGSPLEEEVTEEQEDKAS--IKGF 484
TGTLTCNSMEFIKCSIAG +YGRG+TEVERAMA R GSPL E + D++ +KGF
Sbjct: 432 TGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNEDLDVVVDQSGPKVKGF 491
Query: 485 NFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 544
NFEDER+MNG+WV +P A V+QKF RLLA+CHTA+PE DEE+G +SYEAESPDEAAFV+A
Sbjct: 492 NFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVVA 551
Query: 545 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLL 604
ARE GFEF+ RTQ IS ELD V+G KVER Y LLNVLEF+S+RKRMSVIVR ++G LL
Sbjct: 552 AREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMSVIVRDDDGKLL 611
Query: 605 LLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664
LLSKGAD+VMFERLA+NGR+FE +T+EH+N+YADAGLRTL+LAYRE+DE EY +FN+ F
Sbjct: 612 LLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKSFN 671
Query: 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTG 724
EAK SVS DRE L +EI +K+E++LILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTG
Sbjct: 672 EAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTG 731
Query: 725 DKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 784
DKMETAINIGFA SLLRQ M+Q+II+ ETP+ K+LEKS K A + SV+ QL GK
Sbjct: 732 DKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQLQEGK 791
Query: 785 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRL 844
LL +S S ALIIDGKSLTYALED++K +FL+LA CASVICCRSSPKQKALVTRL
Sbjct: 792 ALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKALVTRL 851
Query: 845 VKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVH 904
VK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVH
Sbjct: 852 VKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVH 911
Query: 905 GHWCYRRISSMVCF 918
GHWCY RI+SM+C+
Sbjct: 912 GHWCYSRIASMICY 925
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1360 bits (3521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/926 (71%), Positives = 771/926 (83%), Gaps = 8/926 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
M RR++ H S I+AF K++F+ DHS IGGPGFSRVV+CN+P S A NY GNYV
Sbjct: 1 MTKCRRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
R+TKYTLA+F PK+LFEQFRRVAN YFL+ +LS T LSPYS +S +LPL VI A+M K
Sbjct: 61 RSTKYTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +EDW RKKQDIE+NNRKVKVH G G F WRDLKVG++V+VEKDEFFPADL+LLSS
Sbjct: 121 EAIEDWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSN-MHEDSNFQNFKAIIRCEDPNANLYTFVG 239
SYE++ICYVET NLDGETNLK+KQ L+ATS+ +HEDS+F+ KA+++CEDPNA+LYTFVG
Sbjct: 181 SYEDSICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVG 240
Query: 240 SLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM 299
+L EEQ+ PL+ QLLLRDSKLRNT+ IYG V+FTG DTKV QNST PPSKRS++ER+M
Sbjct: 241 TLHFEEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKM 300
Query: 300 DKIIYFLFGILVLMSFIGSIFFGIATREDL--QDGKMKRWYLRPDDTTAYYDPKRAAVAA 357
DKIIY +FG++ LMSFIGSI FGI TRED G+ +RWYLRPD+ ++DP RA +AA
Sbjct: 301 DKIIYLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAA 360
Query: 358 VLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEEL 417
V HF TA+MLY Y IPISLYVSIEIVK+LQS+FIN D+ MYYEE DKPA ARTSNLNEEL
Sbjct: 361 VYHFFTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEEL 420
Query: 418 GQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA-RRKGSPLEEEVTEEQE 476
G VDTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVER+MA R GS L + +
Sbjct: 421 GMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVV 480
Query: 477 DKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
D++ IKGFNF DER+M G+WV + A V+QKF RLLA+CHTA+PE DE G +SYEAE
Sbjct: 481 DQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAE 540
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
SPDEAAFV+AARE GFEF+ RTQ IS ELD +G VER Y LLNVLEF+S+RKRMSV
Sbjct: 541 SPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSV 600
Query: 595 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654
IVR E+G LLLLSKGAD+VMFERLA+NGR+FEE+T+EH+NEYADAGLRTLILAYRE+DE
Sbjct: 601 IVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDEN 660
Query: 655 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 714
EY +F++ F EAKNSV+ADRE L +EI E++E++LILLGATAVEDKLQNGVP+CIDKLAQ
Sbjct: 661 EYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQ 720
Query: 715 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 774
AGIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETP K LEK+ +K A A +
Sbjct: 721 AGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRE 780
Query: 775 SVLHQLIRGKELLDSSNESLG--PLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR 832
SV++Q+ GK LL +S+ + ALIIDGKSLTYALEDD K FL+LA GCASVICCR
Sbjct: 781 SVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCR 840
Query: 833 SSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892
SSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA
Sbjct: 841 SSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 900
Query: 893 QFRFLERLLLVHGHWCYRRISSMVCF 918
QFR+LERLLLVHGHWCY RISSM+C+
Sbjct: 901 QFRYLERLLLVHGHWCYSRISSMICY 926
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/928 (66%), Positives = 768/928 (82%), Gaps = 13/928 (1%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RRK FS++++F C K + DHS IG G+SRVV CNDP++ EA LNY GNYV
Sbjct: 1 MAGERRKGMKFSKLYSFKCFKPFSREDHSQIGSRGYSRVVFCNDPDNPEALQLNYRGNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TTKYT A F PK+LFEQFRRVAN+YFL+ A +SF+PL+PY+A S + PL++VIGATM K
Sbjct: 61 STTKYTAANFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTAPSVLAPLLIVIGATMVK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +ED RR+KQD+E NNRKV+V G F TKW++L+VGD+VKV KDE+FPADL+LLSS
Sbjct: 121 EGVEDLRRRKQDVEANNRKVEVLGKTGTFVETKWKNLRVGDLVKVHKDEYFPADLLLLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLKLK AL+ TS ++ + +NF+ +I+CEDPN +LY+FVG+
Sbjct: 181 SYEDGICYVETMNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGT 237
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
L E +QYPL+PQQ+LLRDSKL+NTD +YG V+FTG DTKV QN+T PPSKRSK+E++MD
Sbjct: 238 LYFEGKQYPLSPQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMD 297
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQD-GKMKRWYLRPDDTTAYYDPKRAAVAAVL 359
+IIY LF IL++++F GS+FFGIATR D+ D GK++RWYLRPD TT +YDP+RA AA
Sbjct: 298 QIIYILFSILIVIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFF 357
Query: 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQ 419
HFLTALMLYGYLIPISLYVSIE+VK+LQSIFINQD MY+EETD+PARARTSNLNEELGQ
Sbjct: 358 HFLTALMLYGYLIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQ 417
Query: 420 VDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQ---- 475
VDTILSDKTGTLTCNSMEF+KCSIAGT+YGRG+TEVE A+ ++KG +EEV + +
Sbjct: 418 VDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEVGDNESLSI 477
Query: 476 EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAES 535
+++ ++KGFNF DERI++G W+N+P+A++IQKF R+LAICHTA+P+V+ + G+I+YEAES
Sbjct: 478 KEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEAES 537
Query: 536 PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595
PDEAAFVIA+RELGFEF+ R+QTSIS+HE+D +TG KV+R Y LL+VLEFSSSRKRMSVI
Sbjct: 538 PDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSSRKRMSVI 597
Query: 596 VRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKE 655
VR+ E LLLLSKGADSVMF+RLA++GR+ E +TKEHI +YA+AGLRTL++ YRE+DE E
Sbjct: 598 VRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITYREIDEDE 657
Query: 656 YKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 715
Y + EEF AK V+ DR+ L + A+KIEK+LILLG+TAVEDKLQ GVP+CI+KL+QA
Sbjct: 658 YIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQA 717
Query: 716 GIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 775
G+K+WVLTGDK ETAINIG+ACSLLR+GM+Q++++ ++ + + LEK DK A A A S
Sbjct: 718 GVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAVAKASFQS 777
Query: 776 VLHQLIRGKELL-----DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 830
+ QL G +S+ E+ L+IDGKSLTYAL+ ++ FLELAI C SVIC
Sbjct: 778 IKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAIRCNSVIC 837
Query: 831 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIA 890
CRSSPKQKALVTRLVK T TTLAIGDGANDVGMLQEADIGVGISG EGMQAVM+SD A
Sbjct: 838 CRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFA 897
Query: 891 IAQFRFLERLLLVHGHWCYRRISSMVCF 918
IAQFRFLERLLLVHGHWCYRRI+ M+C+
Sbjct: 898 IAQFRFLERLLLVHGHWCYRRITLMICY 925
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/952 (59%), Positives = 703/952 (73%), Gaps = 58/952 (6%)
Query: 8 KHHFSRIHAFSCGKTSF---KGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTK 64
K HF + F C + +G H +I GPG++R+VHCN P A VL Y+ NYV TT+
Sbjct: 12 KSHF---YTFKCLRPKTLEDQGPH-IINGPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTR 67
Query: 65 YTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLE 124
Y L TF PK L+EQF RVAN YFL+ AILS PLSP++ S + PL+ V+G +MGKE LE
Sbjct: 68 YNLITFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLIFVVGLSMGKEALE 127
Query: 125 DWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEE 184
DWRR QD++VN+RK VH G+G F KW+ L+VGDVVKVEKD+FFPADL+LLSSSYE+
Sbjct: 128 DWRRFMQDVKVNSRKATVHRGDGDFGRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYED 187
Query: 185 AICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELE 244
ICYVET NLDGETNLK+K+ LD T + D FQ+F I+CEDPN NLYTFVG+LE +
Sbjct: 188 GICYVETMNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYD 247
Query: 245 EQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIY 304
Q YPL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+RMD IIY
Sbjct: 248 GQVYPLDPSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIY 307
Query: 305 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTA 364
LF +LVL+SFI S+ F + T+ + D WYLRPD +P+ A V+H +TA
Sbjct: 308 TLFALLVLVSFISSLGFAVMTKMHMGDW----WYLRPDKPERLTNPRNPFHAWVVHLITA 363
Query: 365 LMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424
++LYGYLIPISLYVSIE+VK+LQ+ FINQDL MY E+ PA+ARTSNLNEELGQVDTIL
Sbjct: 364 VLLYGYLIPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTIL 423
Query: 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE---------- 474
SDKTGTLTCN M+F+KCSIAGTSYG +EVE A A++ L+EE EE
Sbjct: 424 SDKTGTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGR 483
Query: 475 ----------------------------QEDKASIKGFNFEDERIMNGSWVNEPHADVIQ 506
Q IKGF+FED+R+M G+W+NEP++D I
Sbjct: 484 MHGYAKMPSKTSSDIELETVITATDEGDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDIL 543
Query: 507 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 566
FLR+LA+CHTA+PEVDE+ GK +YEAESPDE AF++AA E GFEF +RTQ+S+ + E
Sbjct: 544 MFLRILAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH 603
Query: 567 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 626
+G VER Y +LNVL+F+S RKRMSVIVR E+G +LLL KGADS++FERL++NG+ +
Sbjct: 604 --SGQPVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYL 661
Query: 627 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE 686
E T +H+N Y +AGLRTL L+YR+LDE EY +N EF +AK SV ADR+E+ E++++ +E
Sbjct: 662 EATSKHLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMME 721
Query: 687 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 746
K LIL+GATAVEDKLQ GVP+CIDKLAQAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q
Sbjct: 722 KELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQ 781
Query: 747 VIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSL 806
+ I+ E S+D AAA + ++L Q+I +++ + ALIIDGK+L
Sbjct: 782 IYIALRNEEG----SSQDPEAAA---RENILMQIINASQMIKLEKDPHAAFALIIDGKTL 834
Query: 807 TYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 866
TYALEDD+K FL LA+ CASVICCR SPKQKALVTRL K T TTLAIGDGANDVGM+
Sbjct: 835 TYALEDDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMI 894
Query: 867 QEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCF 918
QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ M+C+
Sbjct: 895 QEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 946
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/949 (58%), Positives = 695/949 (73%), Gaps = 50/949 (5%)
Query: 8 KHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEAS-VLNYSGNYVRTTKYT 66
K HF +G H +I GPG++R+VHCN P A+ ++ Y NYV TT+Y
Sbjct: 12 KSHFYTFRCLRPKTLDDQGPH-VINGPGYTRIVHCNQPHLHLATKLIRYRSNYVSTTRYN 70
Query: 67 LATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDW 126
L TF PK L+EQF RVAN YFL+ AILS PLSP++ S + PLV V+G +MGKE LEDW
Sbjct: 71 LLTFLPKCLYEQFHRVANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMGKEALEDW 130
Query: 127 RRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAI 186
RR QD+EVN+RK VH G G F W+ ++VGD+V+VEKDEFFPADL+LLSSSYE+ I
Sbjct: 131 RRFMQDVEVNSRKASVHKGSGDFGRRTWKRIRVGDIVRVEKDEFFPADLLLLSSSYEDGI 190
Query: 187 CYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQ 246
CYVET NLDGETNLK+K+ LDAT + +D +FQNF I+CEDPN NLYTFVG+LE + Q
Sbjct: 191 CYVETMNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQ 250
Query: 247 QYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFL 306
YPL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+RMD IIY L
Sbjct: 251 VYPLDPNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTL 310
Query: 307 FGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALM 366
F +L+ +SFI S+ F + T+ + + WYLRPD + +P A V+H +TAL+
Sbjct: 311 FALLLTVSFISSLGFAVMTKLLMAEW----WYLRPDKPESLTNPTNPLYAWVVHLITALL 366
Query: 367 LYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSD 426
LYGYLIPISLYVSIE+VK+LQ+ FINQDL +Y E+ PA+ARTSNLNEELGQVDTILSD
Sbjct: 367 LYGYLIPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSD 426
Query: 427 KTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTE------------- 473
KTGTLTCN M+F+KCSIAGTSYG +EVE A A++ LEE+ E
Sbjct: 427 KTGTLTCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQR 486
Query: 474 ------------------------EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFL 509
+Q+ +KGF+FED R+MN +W+NEP++D I F
Sbjct: 487 YAKLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFF 546
Query: 510 RLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 569
R+LA+CHTA+PEVDE+ G +YEAESPDE AF++A+RE GFEF +RTQ+S+ + E +
Sbjct: 547 RILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSS 606
Query: 570 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQT 629
G V+R Y +LN+L+F+S RKRMS IVR EEG +LLL KGADS++FERL+++G+E+ T
Sbjct: 607 GQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGAT 666
Query: 630 KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 689
+H+N Y +AGLRTL L YR+LDE EY +N EF +AK SV ADR+E+ E++++ +EK L
Sbjct: 667 SKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKEL 726
Query: 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVII 749
IL+GATAVEDKLQ GVP+CID LAQAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I
Sbjct: 727 ILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISI 786
Query: 750 SSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYA 809
S E E S++ AAA K S+L Q+ +++ + ALIIDGK+LTYA
Sbjct: 787 SLTNVE----ESSQNSEAAA---KESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYA 839
Query: 810 LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEA 869
L+DDVK FL LA+ CASVICCR SPKQKALVTRL K T TTLAIGDGANDVGM+QEA
Sbjct: 840 LKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEA 899
Query: 870 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCF 918
DIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ M+C+
Sbjct: 900 DIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 948
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/947 (59%), Positives = 693/947 (73%), Gaps = 42/947 (4%)
Query: 3 GNRRKKHHFSRIHAFSCGK-TSFKG-DHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
G R K S ++ F C + + +G D I GPGFSR V CN P + L Y NYV
Sbjct: 4 GRIRSKLRLSLLYTFGCLRPATLEGQDSQPIQGPGFSRTVFCNQPHMHKKKPLRYRSNYV 63
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TT+Y L TFFPK+L+EQF R AN+YFL+ AILS PLSP++ S + PLV V+G +M K
Sbjct: 64 STTRYNLITFFPKSLYEQFHRAANLYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E LEDWRR QD+++N RK VH +G F KW+ + VGD+VKVEKDEFFPADL+LLSS
Sbjct: 124 EALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKDEFFPADLLLLSS 183
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLK+K++L+ + + +D +F+NF A IRCEDPN NLYTFVG+
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGN 243
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
LE E Q +PL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++ER MD
Sbjct: 244 LEFERQTFPLDPSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMD 303
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
IIY L +L+L+S I S G A + KM WYLRP + + +P A V+H
Sbjct: 304 YIIYTLLVLLILISCISSS--GFAWETEFHMPKM--WYLRPGEPIDFTNPINPIYAGVVH 359
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
+TAL+LYGYLIPISLYVSIE+VK+ Q+ FINQDLHMY +E+ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEE---------- 470
TILSDKTGTLTCN M+F+KCSIAGTSYG +EVE A A++ LEE
Sbjct: 420 HTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQ 479
Query: 471 ----------VTEEQE---------DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 511
T+E E +A IKGF FED R+MNG+W+ E + I +F R+
Sbjct: 480 TKVYGTWDSSRTQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRI 539
Query: 512 LAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 571
LAICHTA+PE++EE GK +YEAESPDEA+F+ AARE GFEF++RTQ+S+ + E +G
Sbjct: 540 LAICHTAIPELNEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQ 599
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 631
+ER Y +LN+LEF+S RKRM+VIVR EEG +LLL KGADS++FERLA+NG+ + T
Sbjct: 600 IIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTR 659
Query: 632 HINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 691
H+ EY +AGLRTL LAYR+LDE EY +N EF +AK S+ +DR+EL E A+ IEK LIL
Sbjct: 660 HLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELIL 719
Query: 692 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISS 751
+GATAVEDKLQ GVP+CIDKLAQAG+KLWVLTGDKMETAINIGFACSLLRQGMRQ+ I+S
Sbjct: 720 IGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICITS 779
Query: 752 ETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE 811
E S+D + +K ++L+QL + +++ + ALIIDGK+LTYALE
Sbjct: 780 MNSEG----GSQD---SKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALE 832
Query: 812 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 871
DD+K FL LA+ CASVICCR SPKQKALV RLVK T TTLAIGDGANDVGM+QEADI
Sbjct: 833 DDMKYQFLALAVDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADI 892
Query: 872 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCF 918
GVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ M+C+
Sbjct: 893 GVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 939
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/936 (59%), Positives = 690/936 (73%), Gaps = 32/936 (3%)
Query: 3 GNRRKKHHFSRIHAFSCGKTSFK--GDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
G R K S I+ F C + S D I GPGFSR V+CN P + L Y NYV
Sbjct: 4 GRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSNYV 63
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TT+Y L TFFPK L+EQF R AN YFL+ AILS PLSP++ S + PLV V+G +M K
Sbjct: 64 STTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E LEDW R QD+++N KV VH +G F KW+ + VGD+VKVEKD FFPADL+LLSS
Sbjct: 124 EALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSS 183
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLK+K++L+ T ++ + +F++F IIRCEDPN +LYTFVG+
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGN 243
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
LE E Q +PL P Q+LLRDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+ MD
Sbjct: 244 LEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMD 303
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
IIY L +L+L+S I S F T+ + K WYLRP++ +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVH 359
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
+TAL+LYGYLIPISLYVSIE+VK+LQ+ FIN+DLHMY E+ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEE----------- 469
DTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE A A++ L+E
Sbjct: 420 DTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTP 479
Query: 470 -------EVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV 522
EV + IKGF FED R+M+G+W+ EPH D I F R+LAICHTA+PE+
Sbjct: 480 RAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPEL 539
Query: 523 DEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582
+EE GK +YEAESPDEA+F+ AA E GF F++RTQ+S+ VHE +G +ER Y +LN+
Sbjct: 540 NEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNL 599
Query: 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLR 642
L+F+S RKRMSV+VR EEG +LLL KGADS++FERLA+NG+ + T +H+NEY +AGLR
Sbjct: 600 LDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLR 659
Query: 643 TLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQ 702
TL L+YR+LDE+EY +N EF +AK S+ +DR+EL E I++ IEK+LIL+GATAVEDKLQ
Sbjct: 660 TLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQ 719
Query: 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKS 762
GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CSLLRQGM+Q+ I T+ S
Sbjct: 720 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICI--------TVVNS 771
Query: 763 EDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822
E S A A+K ++L+Q+ + +++ + ALIIDGK+LTYALED++K FL LA
Sbjct: 772 EGASQDAKAVKDNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALA 831
Query: 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 882
+ CASVICCR SPKQKALVTRLVK T TLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 832 VDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
Query: 883 AVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCF 918
AVM+SD +IAQFRFLERLL+VHGHWCY+RI+ M+C+
Sbjct: 892 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 927
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/891 (50%), Positives = 611/891 (68%), Gaps = 31/891 (3%)
Query: 38 RVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP 97
R V+CND ES + + + GN + TTKY + TF PK LFEQFRR+AN+YFL + LS TP
Sbjct: 36 RTVYCNDRESNQP--VRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 98 LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDL 157
+SP S ++NV PL +V+ ++ KE EDW+R + D+ +NN V++ + + WR L
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEI-LQDQQWVSIPWRKL 152
Query: 158 KVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSN 217
+VGD+VK++KD FFPAD++ +SS+ + ICYVET NLDGETNLK+++AL+ T +
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 218 FQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGR 277
FK I+CE PN +LYTF G+L +++Q PL+P QLLLR LRNT+ I GAV+FTG
Sbjct: 213 AYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGH 272
Query: 278 DTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT-REDLQDGKMKR 336
+TKV N+ PSKRS +E+++DK+I +F +LV M IG+I I T RED G
Sbjct: 273 ETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYLG---- 328
Query: 337 WYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI-FINQDL 395
L D ++ + + F T + L+ +IPISLYVSIE++K +QS FIN+DL
Sbjct: 329 --LHNSD----WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDL 382
Query: 396 HMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEV 455
+MY+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+
Sbjct: 383 NMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEI 442
Query: 456 ERAMARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 513
E+ +A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LA
Sbjct: 443 EKGIAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLA 498
Query: 514 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 573
ICHT LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K+
Sbjct: 499 ICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKI 558
Query: 574 ER-SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 632
+ +Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH
Sbjct: 559 QDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREH 618
Query: 633 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 692
+ + +GLRTL LAY++L+ + Y +NE+F +AK+++ DRE+ +E+AE IEK+LIL+
Sbjct: 619 LEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILI 677
Query: 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 752
G+TA+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSE
Sbjct: 678 GSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSE 737
Query: 753 TPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESL----GP-LALIIDGKSLT 807
T + E+ D+ A +K V +L K+ L+ + SL GP L+L+IDGK L
Sbjct: 738 TDAIREAEERGDQVEIARVIKEEVKREL---KKSLEEAQHSLHTVAGPKLSLVIDGKCLM 794
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 867
YAL+ ++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q
Sbjct: 795 YALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQ 854
Query: 868 EADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCF 918
A +G+GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI +V +
Sbjct: 855 AAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMY 905
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | ||||||
| 224121336 | 1183 | aminophospholipid ATPase [Populus tricho | 0.984 | 0.772 | 0.826 | 0.0 | |
| 255541872 | 1187 | Phospholipid-transporting ATPase, putati | 0.989 | 0.773 | 0.825 | 0.0 | |
| 356567694 | 1189 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.772 | 0.822 | 0.0 | |
| 225455798 | 1192 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.770 | 0.816 | 0.0 | |
| 356516900 | 1190 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.771 | 0.821 | 0.0 | |
| 356513878 | 1205 | PREDICTED: putative phospholipid-transpo | 0.989 | 0.761 | 0.794 | 0.0 | |
| 449486875 | 1196 | PREDICTED: LOW QUALITY PROTEIN: putative | 0.988 | 0.766 | 0.777 | 0.0 | |
| 449439369 | 1196 | PREDICTED: putative phospholipid-transpo | 0.988 | 0.766 | 0.777 | 0.0 | |
| 449439677 | 1196 | PREDICTED: putative phospholipid-transpo | 0.988 | 0.766 | 0.773 | 0.0 | |
| 357477713 | 1209 | Phospholipid-transporting ATPase [Medica | 0.989 | 0.759 | 0.769 | 0.0 |
| >gi|224121336|ref|XP_002318557.1| aminophospholipid ATPase [Populus trichocarpa] gi|222859230|gb|EEE96777.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1601 bits (4146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/921 (82%), Positives = 842/921 (91%), Gaps = 7/921 (0%)
Query: 5 RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTK 64
RRKK FSRIHAF CG+ SF+ +HSLIGGPGFSR+V+CN+PE FEA + NY+ NYVRTTK
Sbjct: 1 RRKKQRFSRIHAFPCGRASFRSEHSLIGGPGFSRIVYCNEPECFEAGLQNYASNYVRTTK 60
Query: 65 YTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLE 124
YTLATF PK+LFEQFRRVAN YFL+CAILSFTPLSPYSA+SNV+PLVVVIGATMGKEV+E
Sbjct: 61 YTLATFLPKSLFEQFRRVANFYFLLCAILSFTPLSPYSAISNVVPLVVVIGATMGKEVIE 120
Query: 125 DWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEE 184
DWRRKKQDIE+NNRKVKVH GEG FD+ KW DLKVGD+V+VEKDE+FPADLILLSSSY+E
Sbjct: 121 DWRRKKQDIEMNNRKVKVHYGEGVFDHAKWMDLKVGDIVRVEKDEYFPADLILLSSSYDE 180
Query: 185 AICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELE 244
AICYVETTNLDGETNLKLKQA D TSN+HEDS FQ+FKAIIRCEDPNANLY+F+GSL+L
Sbjct: 181 AICYVETTNLDGETNLKLKQAPDVTSNLHEDSGFQDFKAIIRCEDPNANLYSFIGSLDLG 240
Query: 245 EQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIY 304
E Q+ L PQQLLLRDSKLRNTD IYG VIFTG DTKV QNST PPSKRSK+E+RMDK+IY
Sbjct: 241 EDQHALMPQQLLLRDSKLRNTDYIYGVVIFTGHDTKVMQNSTAPPSKRSKIEKRMDKVIY 300
Query: 305 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTA 364
LF +LVL+SFIGSIFFGI+T+EDL+DG+MKRWYLRPD TT YYDP RA AA+LHF TA
Sbjct: 301 LLFFLLVLISFIGSIFFGISTKEDLEDGRMKRWYLRPDKTTIYYDPHRAPAAAILHFFTA 360
Query: 365 LMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424
LMLYGYLIPISLYVSIEIVK+LQSIFIN+DLHMY+EETDKPARARTSNLNEELGQVDTIL
Sbjct: 361 LMLYGYLIPISLYVSIEIVKVLQSIFINRDLHMYHEETDKPARARTSNLNEELGQVDTIL 420
Query: 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEE-------VTEEQED 477
SDKTGTLTCNSMEFIKCS+AGTSYGRGVTEVE+ MARRKGSPL +E V E
Sbjct: 421 SDKTGTLTCNSMEFIKCSVAGTSYGRGVTEVEKDMARRKGSPLPQEETEEEDIVEGVAEG 480
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K S+KGFNF DERI NG WVNEPHADV+QKFLRLLAICHTA+PE+DEE G+ISYEAESPD
Sbjct: 481 KPSVKGFNFVDERITNGHWVNEPHADVVQKFLRLLAICHTAIPEIDEETGRISYEAESPD 540
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARELGF+FYERTQTSI +HELD V+GTKVERSY LLN++EF+SSRKRMSVIVR
Sbjct: 541 EAAFVIAARELGFKFYERTQTSILLHELDLVSGTKVERSYQLLNIIEFNSSRKRMSVIVR 600
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+E+G LLLL KGADSVMFERLA +GREFEE T+EHI EYADAGLRTL+LAYRELDE+EY
Sbjct: 601 NEKGKLLLLCKGADSVMFERLARDGREFEEPTREHIGEYADAGLRTLVLAYRELDEEEYD 660
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
+FN EFTEAKNS+SADRE++ EE+AEKIE++LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 661 EFNHEFTEAKNSLSADREDMIEEVAEKIERDLILLGATAVEDKLQNGVPECIDKLAQAGI 720
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+K LEK EDK+A ALKASV+
Sbjct: 721 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPENKALEKMEDKAAGVTALKASVV 780
Query: 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ 837
HQ+ GK LL +S+E+ LALIIDGKSLTYA+EDDVK+LFLELAIGCASVICCRSSPKQ
Sbjct: 781 HQMNEGKALLTASSETSEALALIIDGKSLTYAIEDDVKNLFLELAIGCASVICCRSSPKQ 840
Query: 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897
KALVTRLVK+KT TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL
Sbjct: 841 KALVTRLVKSKTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 900
Query: 898 ERLLLVHGHWCYRRISSMVCF 918
ERLLLVHGHWCYRRISSM+C+
Sbjct: 901 ERLLLVHGHWCYRRISSMICY 921
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541872|ref|XP_002512000.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223549180|gb|EEF50669.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1587 bits (4108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/925 (82%), Positives = 832/925 (89%), Gaps = 7/925 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RRKK HFSRIHAFSCGK SFKGDHSLIGGPGFSRVV+CNDPE FEA + +Y NY+
Sbjct: 1 MAGGRRKKQHFSRIHAFSCGKASFKGDHSLIGGPGFSRVVYCNDPECFEAGLHSYDSNYI 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
RTTKYTLATFFPK+LFEQFRRVAN YFLICAILSFTPLSPYSAVSNV+PL+VVIGATMGK
Sbjct: 61 RTTKYTLATFFPKSLFEQFRRVANFYFLICAILSFTPLSPYSAVSNVVPLLVVIGATMGK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
EVLEDW+RK+QDIEVNNRKVKVH G+G F TKW DLKVGD+VKVEKDEFFPADLILLSS
Sbjct: 121 EVLEDWKRKRQDIEVNNRKVKVHSGDGDFLPTKWMDLKVGDIVKVEKDEFFPADLILLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SY+E ICYVET NLDGETNLKLKQALDATSN+ EDS+F +FK++IRCEDPNANLY+F+GS
Sbjct: 181 SYDEGICYVETMNLDGETNLKLKQALDATSNLQEDSSFHDFKSLIRCEDPNANLYSFIGS 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
EL EQQYPL+PQQLLLRDSKLRNT IYG VIFTG DTKV QNST PPSKRSK+ERR D
Sbjct: 241 FELGEQQYPLSPQQLLLRDSKLRNTYFIYGVVIFTGHDTKVMQNSTAPPSKRSKIERRTD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
K+IY LF ILVLMSFIGSIFFGIATRED+++GKMKRWYLRPD TT YYDPKRA AA+LH
Sbjct: 301 KVIYLLFFILVLMSFIGSIFFGIATREDIENGKMKRWYLRPDHTTVYYDPKRAPAAAILH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
FLTALMLY YLIPISLYVSIEIVK+LQSIFINQDLHMY+EE DKPARARTSNLNEELGQV
Sbjct: 361 FLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYFEEGDKPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEE-------VTE 473
DTILSDKTGTLTCNSME IK S+AGTSYGRG+TEVE+AMARRKGSPL +E V E
Sbjct: 421 DTILSDKTGTLTCNSMELIKFSVAGTSYGRGITEVEKAMARRKGSPLPQEEIEGDTDVEE 480
Query: 474 EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
+ E S KG+NF DERI +G WVNEP ADVIQKFLRLLAICHTA+PE DEE G+ISYEA
Sbjct: 481 QTEQTISTKGYNFVDERISDGHWVNEPCADVIQKFLRLLAICHTAIPESDEETGRISYEA 540
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDEAAFVIAARELGFEF+ERTQ SIS+ ELDPVTG KV R Y LLNV+EF+SSRKRMS
Sbjct: 541 ESPDEAAFVIAARELGFEFFERTQASISLLELDPVTGQKVTRYYQLLNVIEFTSSRKRMS 600
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR E G LLLL KGADS+MFERLA+NGREFE +TKEHI+EYADAGLRTL+LAYRELDE
Sbjct: 601 VIVRDEGGKLLLLCKGADSIMFERLAKNGREFEGKTKEHISEYADAGLRTLVLAYRELDE 660
Query: 654 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 713
+EY +F++EF EAK+ +SADREE EE+A +IE++LILLGATAVEDKLQ GVPECIDKLA
Sbjct: 661 EEYNEFSQEFNEAKSLLSADREETIEEVAARIERDLILLGATAVEDKLQQGVPECIDKLA 720
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 773
QAGIK+WVLTGDKMETAINIGFACSLLRQGM+QVIISSET E+KTL+K EDK AA A K
Sbjct: 721 QAGIKIWVLTGDKMETAINIGFACSLLRQGMKQVIISSETSENKTLQKMEDKDAADVASK 780
Query: 774 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
ASVL Q+ GK LL +S+ESL LALIIDG SL YAL+DDVKD FLELAIGCASVICCRS
Sbjct: 781 ASVLRQINEGKALLGASSESLEALALIIDGNSLAYALQDDVKDEFLELAIGCASVICCRS 840
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRLVKTKT STTLAIGDGANDVGMLQEADIGVGISGVEGMQA+MSSD AIAQ
Sbjct: 841 SPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAIMSSDFAIAQ 900
Query: 894 FRFLERLLLVHGHWCYRRISSMVCF 918
FR+LERLLLVHGHWCYRRISSM+C+
Sbjct: 901 FRYLERLLLVHGHWCYRRISSMICY 925
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567694|ref|XP_003552052.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1580 bits (4091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/919 (82%), Positives = 845/919 (91%), Gaps = 1/919 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
M GNRR++HHFSRIHAFSCGK SFKG+HSLIGGPGFSR+V+CN+ E E S+++Y NYV
Sbjct: 1 MGGNRRRRHHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEAERGEGSLVSYGDNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TTKYT+ATF PK+LFEQFRRVAN YFLICAILSF P+SPYSAVSNV+PLVVV+ ATMGK
Sbjct: 61 STTKYTVATFLPKSLFEQFRRVANFYFLICAILSFFPVSPYSAVSNVVPLVVVVAATMGK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +EDW+RKKQDI++NNRKVKVH GEG F Y+KW+DLKVGD+VKVEKDEFFPADLILLSS
Sbjct: 121 EAVEDWKRKKQDIDMNNRKVKVHRGEGIFGYSKWKDLKVGDIVKVEKDEFFPADLILLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
S ++AICYVET NLDGETNLK+KQ+L+ TS + EDS+FQNFKAII+CEDPNANLY+FVGS
Sbjct: 181 SNDDAICYVETMNLDGETNLKVKQSLEETSKLQEDSSFQNFKAIIKCEDPNANLYSFVGS 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
LELE+Q YPL+PQ LLLRDSKLRNT+ IYG VIFTG DTKV QNST PPSKRS VE+RMD
Sbjct: 241 LELEDQLYPLSPQHLLLRDSKLRNTEFIYGVVIFTGHDTKVMQNSTEPPSKRSTVEKRMD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
KIIYFLF +L+L+SFIGS+FFGIATREDL++G MKRWYLRPDDTT Y+DPK+A VAA+LH
Sbjct: 301 KIIYFLFLVLLLISFIGSVFFGIATREDLENGVMKRWYLRPDDTTIYFDPKKAPVAAMLH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
FLTALMLY YLIPISLYVSIE+VK+LQSIFINQDLHMYYEETD+PA ARTSNLNEELGQV
Sbjct: 361 FLTALMLYSYLIPISLYVSIEVVKVLQSIFINQDLHMYYEETDRPAHARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE-DKA 479
DTILSDKTGTLTCNSMEFIKCSIAG +YG+GVTEVERA+ARRKG P ++E+TE+ K+
Sbjct: 421 DTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVERALARRKGVPTDQELTEDGNVPKS 480
Query: 480 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEA 539
SIKGFNF DERIMNG+W+NEPHA+VIQ FLRLLA+CHTA+PEVD+E GK+SYEAESPDEA
Sbjct: 481 SIKGFNFMDERIMNGNWINEPHANVIQNFLRLLAVCHTAIPEVDDEIGKVSYEAESPDEA 540
Query: 540 AFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE 599
AFV+AARELGFEFYERTQT+IS+HE +P +G ERSY LLN+LEFSS+RKRMSVIVR E
Sbjct: 541 AFVVAARELGFEFYERTQTNISLHEFNPRSGKTTERSYKLLNILEFSSTRKRMSVIVRDE 600
Query: 600 EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 659
EG LLL SKGADSVMFERLA NGREFEE+TK+HI EYADAGLRTLILAYRELDE+EY F
Sbjct: 601 EGKLLLFSKGADSVMFERLARNGREFEEKTKQHIEEYADAGLRTLILAYRELDEEEYNLF 660
Query: 660 NEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 719
NEEF EAKN VSADRE++ EEI+EKIEK+LILLG TAVEDKLQNGVPECIDKLAQAGIKL
Sbjct: 661 NEEFMEAKNLVSADREQIVEEISEKIEKDLILLGVTAVEDKLQNGVPECIDKLAQAGIKL 720
Query: 720 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779
WVLTGDKMETAINIGFACSLLRQGM+Q+IISS+T E+K+LEK EDKSAAA A+KASV+HQ
Sbjct: 721 WVLTGDKMETAINIGFACSLLRQGMKQIIISSDTTETKSLEKMEDKSAAAVAIKASVIHQ 780
Query: 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKA 839
L +GKELL S+E+ LALIIDGKSLTYALEDDVKDLFLELA+GCASVICCRSSPKQKA
Sbjct: 781 LAKGKELLAESDENSEALALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKA 840
Query: 840 LVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLER 899
LVTRLVK KT STTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIAQFRFLER
Sbjct: 841 LVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLER 900
Query: 900 LLLVHGHWCYRRISSMVCF 918
LLLVHGHWCYRRISSM+C+
Sbjct: 901 LLLVHGHWCYRRISSMICY 919
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455798|ref|XP_002271424.1| PREDICTED: putative phospholipid-transporting ATPase 9-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1563 bits (4047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/925 (81%), Positives = 834/925 (90%), Gaps = 7/925 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RRK+ HF RIHAFSCG+ SF G+HSLIGGPGFSR+V CNDPE FEA L Y GNYV
Sbjct: 1 MAGGRRKRQHFGRIHAFSCGRASFNGEHSLIGGPGFSRIVFCNDPECFEAGQLKYGGNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
RTTKYTLAT+FPKALFEQFRRVAN+YFLICAILSFT LSPYSA S V PLVVV+G TMGK
Sbjct: 61 RTTKYTLATYFPKALFEQFRRVANIYFLICAILSFTALSPYSAFSTVFPLVVVVGVTMGK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +EDWRRK+QDIE+NNRKVK H G+G FDY KW DLKVGDVVKVEKDEFFPADLILLSS
Sbjct: 121 EAVEDWRRKRQDIEMNNRKVKYHRGDGVFDYAKWMDLKVGDVVKVEKDEFFPADLILLSS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SY++AICYVETTNLDGETNLKLKQALD T+N+ +DS F+NF+AII+CEDPNANLY+FVG+
Sbjct: 181 SYDDAICYVETTNLDGETNLKLKQALDVTANLLDDSRFENFRAIIKCEDPNANLYSFVGN 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
L+LEEQQ+PLTPQQLLLRDSKLRNTD IYG VIFTG DTKV QNST PPSKRSK+ERRMD
Sbjct: 241 LQLEEQQFPLTPQQLLLRDSKLRNTDYIYGVVIFTGHDTKVIQNSTAPPSKRSKIERRMD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
K++Y LF LV +SFIGS+FFGI T EDL++G M RWYLRPDDTT YYDPKRA VAA+LH
Sbjct: 301 KLVYLLFSALVFLSFIGSVFFGITTSEDLENGVMTRWYLRPDDTTIYYDPKRAPVAAILH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
FLTALMLYGYLIPISLYVSIEIVK+LQS+FINQD HMYYEE DKPARARTSNLNEELGQV
Sbjct: 361 FLTALMLYGYLIPISLYVSIEIVKVLQSVFINQDPHMYYEEGDKPARARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQ----- 475
DTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVERA AR K +PL +EV E++
Sbjct: 421 DTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERAQARGKETPLAQEVVEDKDNVEE 480
Query: 476 --EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
E K SIKG+NF DERI NG+WVNEP ADVIQ FLRLLA+CHTA+PEVD+E GKISYEA
Sbjct: 481 ITETKPSIKGYNFIDERITNGNWVNEPRADVIQNFLRLLAVCHTAIPEVDDETGKISYEA 540
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDEAAFVI ARELGFEFYERTQTSIS+HELDP++G KV R+Y L+N++EFSS+RKRMS
Sbjct: 541 ESPDEAAFVIGARELGFEFYERTQTSISLHELDPMSGRKVARTYKLMNIIEFSSARKRMS 600
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR+EEG LLLLSKGADSVMFERLA++GREFE QT+ HINEYADAGLRTL+LAYRELD+
Sbjct: 601 VIVRNEEGRLLLLSKGADSVMFERLAQDGREFEVQTRLHINEYADAGLRTLVLAYRELDD 660
Query: 654 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 713
+EY +FNEEF++AKN VSADREE+ EE+AE+IEK+LILLGATAVEDKLQNGVPECIDKLA
Sbjct: 661 EEYNEFNEEFSQAKNLVSADREEIIEEVAERIEKDLILLGATAVEDKLQNGVPECIDKLA 720
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 773
QAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+II+SETP K LEK+ DKSA A K
Sbjct: 721 QAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSETPGIKALEKAGDKSAVDEAAK 780
Query: 774 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
A+V+ Q+ GK LL+ ++E LALIIDGKSL YALEDDVKD+FLELAIGCASVICCRS
Sbjct: 781 ANVIQQISEGKALLNIASEDSEALALIIDGKSLIYALEDDVKDMFLELAIGCASVICCRS 840
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRLVK KT STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ
Sbjct: 841 SPKQKALVTRLVKVKTGSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 900
Query: 894 FRFLERLLLVHGHWCYRRISSMVCF 918
FRFLERLLLVHGHWCYRRISSM+C+
Sbjct: 901 FRFLERLLLVHGHWCYRRISSMICY 925
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516900|ref|XP_003527130.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1541 bits (3990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/920 (82%), Positives = 842/920 (91%), Gaps = 2/920 (0%)
Query: 1 MAGN-RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNY 59
M GN RR++ HFSRIHAFSCGK SFKG+HSLIGGPGFSR+V+CN+ E E S+++Y NY
Sbjct: 1 MEGNGRRRRRHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEAERGEGSLVSYGDNY 60
Query: 60 VRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMG 119
V TTKYT+ATF PK+LFEQFRRVAN YFLICAILSF P+SPYSAVSNV+PLVVV+ ATMG
Sbjct: 61 VSTTKYTVATFLPKSLFEQFRRVANFYFLICAILSFFPVSPYSAVSNVVPLVVVVAATMG 120
Query: 120 KEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS 179
KE +EDW+RKKQDI++NNRKVKVH G+G FDY+KW+DLKVGD+VKVEKDEFFPADLILLS
Sbjct: 121 KEAVEDWKRKKQDIDMNNRKVKVHRGDGVFDYSKWKDLKVGDIVKVEKDEFFPADLILLS 180
Query: 180 SSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVG 239
SSY++AICYVET NLDGETNLK+KQ+L+ TS + EDS+FQNFKAII+CEDPNANLY+FVG
Sbjct: 181 SSYDDAICYVETMNLDGETNLKVKQSLEETSKLQEDSSFQNFKAIIKCEDPNANLYSFVG 240
Query: 240 SLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM 299
SLELE+Q YPL+P LLLRDSKLRNT+ IYG VIFTG DTKV QNST PPSKRS VE+RM
Sbjct: 241 SLELEDQLYPLSPLHLLLRDSKLRNTEFIYGVVIFTGHDTKVMQNSTEPPSKRSTVEKRM 300
Query: 300 DKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVL 359
DKIIYFLF +L L+SFIGSIFFGIATR+DL++G MKRWYLRPDDTT Y+DPK+A VAA+L
Sbjct: 301 DKIIYFLFLVLFLISFIGSIFFGIATRKDLENGVMKRWYLRPDDTTIYFDPKKAPVAAML 360
Query: 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQ 419
HFLTALMLY YLIPISLYVSIE+VK+LQSIFINQDLHMYYEE D+PA ARTSNLNEELGQ
Sbjct: 361 HFLTALMLYSYLIPISLYVSIEVVKVLQSIFINQDLHMYYEEADRPAHARTSNLNEELGQ 420
Query: 420 VDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE-DK 478
VDTILSDKTGTLTCNSMEFIKCSIAG +YG+GVTEVERA+ARR+G PL +E+TE+ K
Sbjct: 421 VDTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVERALARREGVPLSQELTEDGNVPK 480
Query: 479 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 538
+SIKGFNF DERIM G+W+NEPHADVIQ FLRLLA+CHTA+PEVDEE GK+SYEAESPDE
Sbjct: 481 SSIKGFNFMDERIMKGNWINEPHADVIQNFLRLLAVCHTAIPEVDEEIGKVSYEAESPDE 540
Query: 539 AAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 598
AAFV+AARELGFEFYERTQT+IS+HE +P +G ERSY LLN+LEFSS+RKRMSVIVR
Sbjct: 541 AAFVVAARELGFEFYERTQTNISLHEFNPRSGQTTERSYKLLNILEFSSTRKRMSVIVRD 600
Query: 599 EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658
EEG LLL SKGADSVMFERLA NGREFEE+TK+HI+EYADAGLRTLILAYRELDE+EY
Sbjct: 601 EEGKLLLFSKGADSVMFERLARNGREFEEKTKQHIDEYADAGLRTLILAYRELDEEEYNL 660
Query: 659 FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 718
FNEEF EAKN VSADRE++ EEI+EKIEK+LILLGATAVEDKLQNGVPECIDKLAQAGIK
Sbjct: 661 FNEEFMEAKNLVSADREQIVEEISEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIK 720
Query: 719 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778
LWVLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+K+LEK EDKSAAAAA+K SV+H
Sbjct: 721 LWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPETKSLEKVEDKSAAAAAVKVSVIH 780
Query: 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK 838
QL GKELL S+E+ LALIIDGKSLTYALEDDVKDLFL LA GCASVICCRSSPKQK
Sbjct: 781 QLTNGKELLAESDENSEALALIIDGKSLTYALEDDVKDLFLTLAAGCASVICCRSSPKQK 840
Query: 839 ALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 898
ALVTRLVK KT STTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIAQFRFLE
Sbjct: 841 ALVTRLVKVKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLE 900
Query: 899 RLLLVHGHWCYRRISSMVCF 918
RLLLVHGHWCYRRISSM+C+
Sbjct: 901 RLLLVHGHWCYRRISSMICY 920
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513878|ref|XP_003525635.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1540 bits (3986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/918 (79%), Positives = 833/918 (90%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
MAG RR++HHFSRIHAF+CG+ S K +HSLIGGPGFSR V+CNDPE AS+LNY NYV
Sbjct: 1 MAGGRRRRHHFSRIHAFTCGRASMKEEHSLIGGPGFSRKVYCNDPEHATASLLNYGDNYV 60
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
RTTKYTLATF PK+LFEQFRRVAN YFL+CA+LSF P+SPYS +SNV+PL+VV+ ATM K
Sbjct: 61 RTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGISNVVPLLVVVAATMVK 120
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSS 180
E +ED+ RKKQDIE+NNRKVK+H G G FDY+KWRDLKVGDVV+VEKDEFFPADLILL+S
Sbjct: 121 EFIEDFSRKKQDIEMNNRKVKLHRGGGVFDYSKWRDLKVGDVVRVEKDEFFPADLILLAS 180
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
+Y++AICYVET NLDGETNLKLKQAL+ATS +HEDSNFQNF+A+I+CEDPNANLYTFVGS
Sbjct: 181 NYDDAICYVETMNLDGETNLKLKQALEATSKLHEDSNFQNFRAVIKCEDPNANLYTFVGS 240
Query: 241 LELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
+ELE+QQYPL PQQLLLRDSKLRNTD +YG VIFTG DTKV QN+T PPSKRSK+E+RMD
Sbjct: 241 MELEDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMD 300
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
KIIY LF +L+L+SFIGSIFFGIAT +DL++G+MKRWYLRPDDT YYDP AA+LH
Sbjct: 301 KIIYCLFFVLILISFIGSIFFGIATNDDLENGRMKRWYLRPDDTEIYYDPNEPVAAAILH 360
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
F TALMLYGYLIPISLYVSIEIVK+LQS+FINQD+HMYYEETDKPA ARTSNLNEELGQV
Sbjct: 361 FFTALMLYGYLIPISLYVSIEIVKVLQSVFINQDVHMYYEETDKPAHARTSNLNEELGQV 420
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 480
DTILSDKTGTLTCNSMEFIKCSIAG +YG+ VTEVERA++ R S + + + E K+S
Sbjct: 421 DTILSDKTGTLTCNSMEFIKCSIAGVAYGQRVTEVERALSGRHESHPGQVLEKISESKSS 480
Query: 481 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAA 540
IKGFNF DER+MNG+W+ EP+A+VIQ FL+LLA+CHTA+PEVDEE GK+SYEAESPDEAA
Sbjct: 481 IKGFNFMDERVMNGNWIKEPNANVIQNFLQLLAVCHTAIPEVDEETGKVSYEAESPDEAA 540
Query: 541 FVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE 600
FVIAARELGFEFYERT T+IS+HELDP++G K+ RSY LLN+LEF+S+RKRMSVIVR E
Sbjct: 541 FVIAARELGFEFYERTHTTISLHELDPISGQKINRSYKLLNILEFTSARKRMSVIVRDAE 600
Query: 601 GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFN 660
G LLLLSKGADSVMFER+A+NGR+FEE+TK+HI+EYAD+GLRTLILAYREL+E+EY +F+
Sbjct: 601 GKLLLLSKGADSVMFERIAKNGRDFEEKTKQHISEYADSGLRTLILAYRELNEEEYNKFS 660
Query: 661 EEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 720
+EFTEAKN VS D+E++ E I + IEK+LILLGATAVEDKLQ+GVPECIDKLAQAGIKLW
Sbjct: 661 KEFTEAKNLVSEDQEQIVEGIVQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLW 720
Query: 721 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780
VLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+K+LEK EDKSAA AA+K+SVL QL
Sbjct: 721 VLTGDKMETAINIGFACSLLRQGMKQIIISSDTPETKSLEKMEDKSAAEAAIKSSVLRQL 780
Query: 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL 840
K LL +S+E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL
Sbjct: 781 REAKALLSTSDENYEALALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL 840
Query: 841 VTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900
VTRLVK +T STTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIAQFRFLERL
Sbjct: 841 VTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERL 900
Query: 901 LLVHGHWCYRRISSMVCF 918
LLVHGHWCYRRISSM+C+
Sbjct: 901 LLVHGHWCYRRISSMICY 918
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449486875|ref|XP_004157428.1| PREDICTED: LOW QUALITY PROTEIN: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1530 bits (3960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/923 (77%), Positives = 822/923 (89%), Gaps = 6/923 (0%)
Query: 2 AGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVR 61
+G +R+K HF RIHAF CG+ SFK +HSLIGGPGFSR+V+CNDP+SFEA++LNY GNYV+
Sbjct: 3 SGRKRRKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRIVYCNDPDSFEANLLNYGGNYVK 62
Query: 62 TTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKE 121
T+KYT+A+FFPK+LFEQFRRVAN+YFL CA+LSFTPLSPYS VSNVLPLVVVIG TMGKE
Sbjct: 63 TSKYTVASFFPKSLFEQFRRVANLYFLFCALLSFTPLSPYSPVSNVLPLVVVIGVTMGKE 122
Query: 122 VLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSS 181
LEDWRR KQD+E+NNRKVKVH G+G F TKW DL+VG VV+VEKDEFFPADLILLSSS
Sbjct: 123 ALEDWRRTKQDMEMNNRKVKVHIGDGEFVETKWMDLRVGHVVRVEKDEFFPADLILLSSS 182
Query: 182 YEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSL 241
YEEAICYVET NLDGETNLKLK AL+A+SN+H+DS+FQNFKA I+CEDPNANLY+FVGS+
Sbjct: 183 YEEAICYVETMNLDGETNLKLKNALEASSNLHDDSSFQNFKATIKCEDPNANLYSFVGSM 242
Query: 242 ELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDK 301
LEEQQ+PL+PQQLLLRDSKLRNTD +YG VIFTG DTKV QNST PPSKRSK+E+RMDK
Sbjct: 243 LLEEQQHPLSPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVIQNSTDPPSKRSKIEKRMDK 302
Query: 302 IIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
I++FLFG+LVL+S +GSIFFG+ TR+DL++G+ RWYLRPDDTT YYDPK A AAVL F
Sbjct: 303 IVFFLFGVLVLLSVVGSIFFGVKTRDDLENGRATRWYLRPDDTTIYYDPKNAPAAAVLQF 362
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
LTALML+ YLIPISLYVSIEIVK+LQS+FINQDLHMY+EETDKPA ARTSNLNEELGQVD
Sbjct: 363 LTALMLFSYLIPISLYVSIEIVKVLQSVFINQDLHMYHEETDKPAHARTSNLNEELGQVD 422
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE----D 477
TILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVERA+ARRK S L + + +
Sbjct: 423 TILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESTLPQNFGADNARLSGE 482
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K +KGFNF+DER+M+G+WV EP A+VIQKFL+LLAICHTALPE+DEE GKISYEAESPD
Sbjct: 483 KXFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLLAICHTALPEIDEETGKISYEAESPD 542
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARE GFEFYER+QTSIS+ E DP + KVERSY LL+VLEF+S+RKRMSVI+R
Sbjct: 543 EAAFVIAAREFGFEFYERSQTSISLREFDPTSAKKVERSYQLLDVLEFNSTRKRMSVIIR 602
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+ G LLLL KGADSVMFERLA+N EFEEQTK H+NEYADAGLRTL+LAYREL E+E+
Sbjct: 603 DQRGKLLLLCKGADSVMFERLAKNRCEFEEQTKVHVNEYADAGLRTLVLAYRELKEEEFN 662
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
F++EF +AKN+VS DR+++ +++ E +EK+LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 663 SFHQEFIKAKNTVSTDRDDIIDQLTESVEKDLILLGATAVEDKLQNGVPECIDKLAQAGI 722
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSED--KSAAAAALKAS 775
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSETPE K L+K ED KSAA A K S
Sbjct: 723 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVEDDHKSAAIKAFKTS 782
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
V Q+ K LL SS+E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP
Sbjct: 783 VTQQITDAKALLTSSSETPETLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 842
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKA VT++VK KT STTLA+GDGANDVGM+QEADIG+GISGVEGMQAVMSSDIAIAQFR
Sbjct: 843 KQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEADIGIGISGVEGMQAVMSSDIAIAQFR 902
Query: 896 FLERLLLVHGHWCYRRISSMVCF 918
+LERLLLVHGHWCYRRISSM+C+
Sbjct: 903 YLERLLLVHGHWCYRRISSMICY 925
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439369|ref|XP_004137458.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1528 bits (3957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/923 (77%), Positives = 822/923 (89%), Gaps = 6/923 (0%)
Query: 2 AGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVR 61
+G +R+K HF RIHAF CG+ SFK +HSLIGGPGFSR+V+CNDP+SFEA++LNY GNYV+
Sbjct: 3 SGRKRRKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRIVYCNDPDSFEANLLNYGGNYVK 62
Query: 62 TTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKE 121
T+KYT+A+FFPK+LFEQFRRVAN+YFL+CA+LSF+PLSPYS VSNVLPLVVVIG TMGKE
Sbjct: 63 TSKYTVASFFPKSLFEQFRRVANLYFLLCALLSFSPLSPYSPVSNVLPLVVVIGVTMGKE 122
Query: 122 VLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSS 181
LEDWRR KQD+E+NNRKVKVH +G F TKW DL+VG VV+VEKDEFFPADLILLSSS
Sbjct: 123 ALEDWRRTKQDMEMNNRKVKVHIEDGEFVETKWMDLRVGHVVRVEKDEFFPADLILLSSS 182
Query: 182 YEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSL 241
YEEAICYVET NLDGETNLKLK AL+A+SN+H+DS+FQNFKA I+CEDPNANLY+FVGS+
Sbjct: 183 YEEAICYVETMNLDGETNLKLKNALEASSNLHDDSSFQNFKATIKCEDPNANLYSFVGSM 242
Query: 242 ELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDK 301
LEEQQ+PL+PQQLLLRDSKLRNTD +YG VIFTG DTKV QNST PPSKRSK+E+RMDK
Sbjct: 243 LLEEQQHPLSPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVIQNSTDPPSKRSKIEKRMDK 302
Query: 302 IIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
I++FLFG+LVL+S +GSIFFG+ TR+DL++G+ RWYLRPDDTT YYDPK A AAVL F
Sbjct: 303 IVFFLFGVLVLLSVVGSIFFGVKTRDDLENGRATRWYLRPDDTTIYYDPKNAPAAAVLQF 362
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
LTALML+ YLIPISLYVSIEIVK+LQS+FINQDLHMY+EETDKPA ARTSNLNEELGQVD
Sbjct: 363 LTALMLFSYLIPISLYVSIEIVKVLQSVFINQDLHMYHEETDKPAHARTSNLNEELGQVD 422
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE----D 477
TILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVERA+ARRK S L + + +
Sbjct: 423 TILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESTLPQNFGADNARLSGE 482
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K +KGFNF+DER+M+G+WV EP A+VIQKFL+LLAICHTALPE+DEE GKISYEAESPD
Sbjct: 483 KTFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLLAICHTALPEIDEETGKISYEAESPD 542
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARE GFEFYER+QTSIS+ E DP + KVERSY LL+VLEF+S+RKRMSVI+R
Sbjct: 543 EAAFVIAAREFGFEFYERSQTSISLREFDPTSAKKVERSYQLLDVLEFNSTRKRMSVIIR 602
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+G LLLL KGADSVMFERLA+NG EFEEQTK HINEYADAGLRTL+LAYREL E+E+
Sbjct: 603 DSKGKLLLLCKGADSVMFERLAKNGNEFEEQTKVHINEYADAGLRTLVLAYRELKEEEFN 662
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
F++EF +AKN+VS R+++ +++ E IEK+LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 663 AFHQEFIKAKNTVSTGRDDIIDQLTESIEKDLILLGATAVEDKLQNGVPECIDKLAQAGI 722
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSED--KSAAAAALKAS 775
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSETPE K L+K ED KSAA A K S
Sbjct: 723 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVEDVHKSAAIKAFKTS 782
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
V+ Q+ K LL SS E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP
Sbjct: 783 VIQQITDAKALLTSSTETPETLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 842
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKA VT++VK KT STTLA+GDGANDVGM+QEADIG+GISGVEGMQAVMSSDIAIAQFR
Sbjct: 843 KQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEADIGIGISGVEGMQAVMSSDIAIAQFR 902
Query: 896 FLERLLLVHGHWCYRRISSMVCF 918
+LERLLLVHGHWCYRRISSM+C+
Sbjct: 903 YLERLLLVHGHWCYRRISSMICY 925
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439677|ref|XP_004137612.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 714/923 (77%), Positives = 823/923 (89%), Gaps = 6/923 (0%)
Query: 2 AGNRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVR 61
+G +R+K HF RIHAF CG+ SFK +HSLIGGPGFSR+V+CNDP+SFEA++LNY GNYV+
Sbjct: 3 SGRKRRKQHFRRIHAFPCGRASFKDEHSLIGGPGFSRIVYCNDPDSFEANLLNYGGNYVK 62
Query: 62 TTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKE 121
T+KYT+A+FFPK+LFEQFRRVAN+YFL+CA+LSF+PLSPYS VSNVLPLVVVIG TMGKE
Sbjct: 63 TSKYTVASFFPKSLFEQFRRVANLYFLLCALLSFSPLSPYSPVSNVLPLVVVIGVTMGKE 122
Query: 122 VLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSS 181
LEDWRR KQD+E+NNRKVKVH G+G F TKW DL+VG VV+VEKDEFFPADLILLSSS
Sbjct: 123 ALEDWRRTKQDMEMNNRKVKVHIGDGEFVETKWMDLRVGHVVRVEKDEFFPADLILLSSS 182
Query: 182 YEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSL 241
YEEAICYVET NLDGETNLKLK AL+A+SN+H+DS+FQNFKA I+CEDPNANLY+FVGS+
Sbjct: 183 YEEAICYVETMNLDGETNLKLKNALEASSNLHDDSSFQNFKATIKCEDPNANLYSFVGSM 242
Query: 242 ELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDK 301
LEEQQ+PL+PQQLLLRDSKLRNTD +YG VIFTG DTKV QNST PPSKRSK+E+RMDK
Sbjct: 243 LLEEQQHPLSPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVIQNSTDPPSKRSKIEKRMDK 302
Query: 302 IIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
I++FLF +LVL+S +GSIFFG+ TR+DL++G+ RWYLRPDDTT YY+PK A AAVL F
Sbjct: 303 IVFFLFAVLVLLSVVGSIFFGVKTRDDLENGRATRWYLRPDDTTTYYNPKNAPAAAVLQF 362
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
LTALML+ YLIPISLYVSIEIVK+LQS+FINQDLHMY+EETDKPA ARTSNLNEELGQVD
Sbjct: 363 LTALMLFSYLIPISLYVSIEIVKVLQSVFINQDLHMYHEETDKPAHARTSNLNEELGQVD 422
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE----D 477
TILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVERA+ARRK S L + + +
Sbjct: 423 TILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVERALARRKESTLPQNFGADNARLSGE 482
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
K +KGFNF+DER+M+G+WV EP A+VIQKFL+LLAICHTALPE+DE+ GKISYEAESPD
Sbjct: 483 KTFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLLAICHTALPEIDEKTGKISYEAESPD 542
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EAAFVIAARE GFEFYER+QTSIS+ E DP + KVERSY LL+VLEF+S+RKRMSVI+R
Sbjct: 543 EAAFVIAAREFGFEFYERSQTSISLREFDPTSAKKVERSYQLLDVLEFNSTRKRMSVIIR 602
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
+G LLLL KGADSVMFERLA+N EFEEQTK H+NEYADAGLRTL+LAYREL E+E+
Sbjct: 603 DSKGKLLLLCKGADSVMFERLAKNRCEFEEQTKVHVNEYADAGLRTLVLAYRELKEEEFN 662
Query: 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 717
F++EF +AKN+VS DR+++ +++ E +EK+LILLGATAVEDKLQNGVPECIDKLAQAGI
Sbjct: 663 SFHQEFIKAKNTVSTDRDDIIDQLTESVEKDLILLGATAVEDKLQNGVPECIDKLAQAGI 722
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSED--KSAAAAALKAS 775
K+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSETPE K L+K ED KSAA A K S
Sbjct: 723 KIWVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEGKALDKVEDVHKSAAIKAFKTS 782
Query: 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 835
V+ Q+ K LL SS+E+ LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP
Sbjct: 783 VIQQITDAKALLTSSSETPETLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP 842
Query: 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895
KQKA VT++VK KT STTLA+GDGANDVGM+QEADIG+GISGVEGMQAVMSSDIAIAQFR
Sbjct: 843 KQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEADIGIGISGVEGMQAVMSSDIAIAQFR 902
Query: 896 FLERLLLVHGHWCYRRISSMVCF 918
+LERLLLVHGHWCYRRISSM+C+
Sbjct: 903 YLERLLLVHGHWCYRRISSMICY 925
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357477713|ref|XP_003609142.1| Phospholipid-transporting ATPase [Medicago truncatula] gi|355510197|gb|AES91339.1| Phospholipid-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1506 bits (3900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/926 (76%), Positives = 821/926 (88%), Gaps = 8/926 (0%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKGD-HSLIGGPGFSRVVHCNDPESFEASVLNYSGNY 59
M G RR++HHFS+IHAFSCGK S K D HSLIGGPGFSR V+CND E +S+ Y NY
Sbjct: 1 MTGGRRRRHHFSKIHAFSCGKASMKQDEHSLIGGPGFSRKVYCNDAERAMSSLYTYGDNY 60
Query: 60 VRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMG 119
VRTTKYT+ATF PK+LFEQFRRVAN YFL+ AILSF P++PYSAVSNV+PL+VV+ ATM
Sbjct: 61 VRTTKYTVATFLPKSLFEQFRRVANFYFLVVAILSFFPIAPYSAVSNVIPLLVVVAATMA 120
Query: 120 KEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS 179
KE +ED++RKKQDIE+NNRKVKVH G+G F+ +KWRDLKVGD+VKVEKDE+FPADLILLS
Sbjct: 121 KEFIEDFQRKKQDIEMNNRKVKVHSGDGVFNQSKWRDLKVGDIVKVEKDEYFPADLILLS 180
Query: 180 SSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVG 239
S+YEEAICYV+T NLDGETNLKLKQAL+ TSN+ EDS+FQNFKA+IRCEDPNANLY FVG
Sbjct: 181 SNYEEAICYVDTMNLDGETNLKLKQALEGTSNLQEDSSFQNFKAVIRCEDPNANLYAFVG 240
Query: 240 SLEL-EEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERR 298
SLEL ++QQYPL PQQLLLRDSKL+NTD IYG VIFTG DTKV QNST PPSKRSK+E+R
Sbjct: 241 SLELGDDQQYPLAPQQLLLRDSKLKNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKR 300
Query: 299 MDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAV 358
MD+IIY LF +L+L+SFIGSIFFGI T++D+++G+MKRWYL P+ T YYDP A +AA+
Sbjct: 301 MDRIIYCLFFLLILVSFIGSIFFGIWTKQDIKNGRMKRWYLMPEHTEVYYDPDEAVLAAI 360
Query: 359 LHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELG 418
LHFLTALMLYGY IPISLYVSIE+VK+LQSIFINQDL+MY+EETDKPA ARTSNLNEELG
Sbjct: 361 LHFLTALMLYGYFIPISLYVSIEVVKVLQSIFINQDLNMYHEETDKPAHARTSNLNEELG 420
Query: 419 QVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL------EEEVT 472
QVDTILSDKTGTLTCNSMEFIKCSI G +YGRG TEVERA+++RK S ++ V
Sbjct: 421 QVDTILSDKTGTLTCNSMEFIKCSIGGVAYGRGFTEVERALSKRKDSYFGRKMKNDQNVA 480
Query: 473 EEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYE 532
+ E K++IKGFNF DERIMNG+WV +P+A+VIQ FL++LA+CHTA+PEVDE GKISYE
Sbjct: 481 KAAETKSNIKGFNFMDERIMNGNWVRQPNANVIQNFLKVLAVCHTAIPEVDEATGKISYE 540
Query: 533 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592
AESPDEAAFV+AARE GFEFYER+ +IS+HELD + K+ERSY+LLNVLEFSS+RKRM
Sbjct: 541 AESPDEAAFVVAAREFGFEFYERSHAAISLHELDLQSNMKLERSYNLLNVLEFSSARKRM 600
Query: 593 SVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELD 652
SVIVR +G LLLLSKGADSVMFE L +NGREFEEQTK HINEYAD+GLRTLILAYRELD
Sbjct: 601 SVIVRDHKGKLLLLSKGADSVMFELLGKNGREFEEQTKYHINEYADSGLRTLILAYRELD 660
Query: 653 EKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKL 712
E+EY QFN+E T+AKN VSAD+E++ E+I + IEK+LILLGATAVEDKLQ+GVPECIDKL
Sbjct: 661 EQEYNQFNKELTDAKNLVSADQEQIVEDILQNIEKDLILLGATAVEDKLQDGVPECIDKL 720
Query: 713 AQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAAL 772
AQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+II+S+TPE KTLEK EDKSA+ AA+
Sbjct: 721 AQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPEIKTLEKMEDKSASEAAI 780
Query: 773 KASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR 832
KASV+ Q+ K+LL S+++ LALIIDGKSL YALEDDVK++FLELAIGCASVICCR
Sbjct: 781 KASVVQQITEAKKLLSKSDDNSEALALIIDGKSLAYALEDDVKNVFLELAIGCASVICCR 840
Query: 833 SSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892
SSPKQKALVTRLVK + STTLAIGDGANDVGMLQEADIG+GISGVEGMQAVMSSDIAIA
Sbjct: 841 SSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIA 900
Query: 893 QFRFLERLLLVHGHWCYRRISSMVCF 918
QFR+LERLLLVHGHWCYRRISSM+C+
Sbjct: 901 QFRYLERLLLVHGHWCYRRISSMICY 926
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 928 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.982 | 0.76 | 0.691 | 0.0 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.989 | 0.763 | 0.68 | 0.0 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.984 | 0.759 | 0.678 | 0.0 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.469 | 0.350 | 0.608 | 1.4e-282 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.505 | 0.378 | 0.568 | 6.3e-278 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.467 | 0.353 | 0.614 | 5.2e-274 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.974 | 0.743 | 0.558 | 4.8e-268 | |
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.929 | 0.711 | 0.475 | 1.8e-206 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.745 | 0.527 | 0.402 | 1.6e-186 | |
| UNIPROTKB|E1BPC3 | 1251 | ATP8B1 "Uncharacterized protei | 0.525 | 0.390 | 0.398 | 8.4e-174 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3308 (1169.5 bits), Expect = 0., P = 0.
Identities = 639/924 (69%), Positives = 746/924 (80%)
Query: 5 RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTK 64
RR++ S+++ +C + FK DHS IGGPGFSRVV+CN+P+S EA NYS NYVRTTK
Sbjct: 9 RRRRLQLSKLYTLTCAQACFKQDHSQIGGPGFSRVVYCNEPDSPEADSRNYSDNYVRTTK 68
Query: 65 YTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLE 124
YTLATF PK+LFEQFRRVAN YFL+ +L+FTPL+PY+A S ++PL+ VIGATM KE +E
Sbjct: 69 YTLATFLPKSLFEQFRRVANFYFLVTGVLAFTPLAPYTASSAIVPLLFVIGATMVKEGVE 128
Query: 125 DWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILLSSSYEE 184
DWRR+KQD EVNNRKVKVH G+G+FD +W+ L FFPADL+LLSSSYE+
Sbjct: 129 DWRRQKQDNEVNNRKVKVHRGDGSFDAKEWKTLSIGDIVKVEKNEFFPADLVLLSSSYED 188
Query: 185 AICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSXXXX 244
AICYVET NLDGETNLK+KQ L+ TS++ ++ NF+ F+A ++CEDPNANLY+FVG+
Sbjct: 189 AICYVETMNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELK 248
Query: 245 XXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIY 304
RDSKLRNTD I+GAVIFTG DTKV QNST PPSKRS +E++MDKIIY
Sbjct: 249 GAKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIY 308
Query: 305 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTA 364
+F +++ M+FIGS+ FG+ TR+DL+DG MKRWYLRPD ++ ++DPKRA VAA+ HFLTA
Sbjct: 309 LMFFMVITMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTA 368
Query: 365 LMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424
+MLY Y IPISLYVSIEIVK+LQSIFINQD+HMYYEE DKPARARTSNLNEELGQVDTIL
Sbjct: 369 VMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTIL 428
Query: 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL-----EEEVTEEQEDKA 479
SDKTGTLTCNSMEFIKCS+AGT+YGRGVTEVE AM RRKG PL E ++ E +A
Sbjct: 429 SDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEA 488
Query: 480 -----SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
++KGFNF DERIMNG+WV E HADVIQKF RLLA+CHT +PEVDE+ KISYEAE
Sbjct: 489 ITEESTVKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAE 548
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
SPDEAAFVIAARELGFEF+ RTQT+ISV ELD V+G +VER Y +LNVLEF+S+RKRMSV
Sbjct: 549 SPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSV 608
Query: 595 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654
IV+ E+G LLLL KGAD+VMFERL++NGREFEE+T++H+NEYADAGLRTLILAYRELDEK
Sbjct: 609 IVQEEDGKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEK 668
Query: 655 EYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQ 714
EYK FNE +EAK+SVSADR GATAVEDKLQNGVP+CIDKLAQ
Sbjct: 669 EYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQ 728
Query: 715 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXX 774
AGIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETPE ++
Sbjct: 729 AGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKE 788
Query: 775 XVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS 834
VL Q+I GK L S + ALIIDGKSL YAL+DD+K +FLELA+ CASVICCRSS
Sbjct: 789 NVLSQIINGKTQLKYSGGNA--FALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSS 846
Query: 835 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894
PKQKALVTRLVK+ TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF
Sbjct: 847 PKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 906
Query: 895 RFLERLLLVHGHWCYRRISSMVCF 918
R+LERLLLVHGHWCYRRIS+M+C+
Sbjct: 907 RYLERLLLVHGHWCYRRISTMICY 930
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3248 (1148.4 bits), Expect = 0., P = 0.
Identities = 629/925 (68%), Positives = 743/925 (80%)
Query: 1 MAG--NRRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGN 58
MAG RR++ H S+I++++CGK+SF+ DHS IGGPGFSRVV+CN+P S A NY+GN
Sbjct: 1 MAGPSRRRRRLHLSKIYSYTCGKSSFQEDHSNIGGPGFSRVVYCNEPGSPAAERRNYAGN 60
Query: 59 YVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATM 118
YVR+TKYT+A+FFPK+LFEQFRRVAN YFL+ ILS T LSPY AVS +LPL +VI ATM
Sbjct: 61 YVRSTKYTVASFFPKSLFEQFRRVANFYFLVTGILSLTDLSPYGAVSALLPLALVISATM 120
Query: 119 GKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILL 178
KE +EDWRRK+QDIEVNNRKVKVH G G F +WR+L FFPADL+LL
Sbjct: 121 VKEGIEDWRRKQQDIEVNNRKVKVHDGNGIFRQEEWRNLRVGDIVRVEKDEFFPADLLLL 180
Query: 179 SSSYEEAICYVETTNLDGETNLKLKQALDATSNM-HEDSNFQNFKAIIRCEDPNANLYTF 237
SSSYE+++CYVET NLDGETNLK+KQ L+ATS++ ++DS+F++F+ ++RCEDPN NLY F
Sbjct: 181 SSSYEDSVCYVETMNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVF 240
Query: 238 VGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVER 297
VG+ RDSKLRNT+ +YGAV+FTG DTKV QNST PPSKRS++ER
Sbjct: 241 VGTLALEEERFPLSIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIER 300
Query: 298 RMDKIIYFLFGILVLMSFIGSIFFGIATRED-LQDGKMKRWYLRPDDTTAYYDPKRAAVA 356
MDKIIY +FG++ LMSF+GSI FG+ TRED +++G+ +RWYL+PDD ++DP+RA +A
Sbjct: 301 TMDKIIYLMFGLVFLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMA 360
Query: 357 AVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEE 416
A+ HF TA MLY Y IPISLYVSIEIVK+LQSIFIN+D+HMYYEETDKPA+ARTSNLNEE
Sbjct: 361 AIYHFFTATMLYSYFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEE 420
Query: 417 LGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG-SPLEEEVTEEQ 475
LG VDTILSDKTGTLTCNSMEFIKCSIAG +YGRG+TEVERAMA R G SPL E +
Sbjct: 421 LGMVDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVNEDLDVV 480
Query: 476 EDKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
D++ +KGFNFEDER+MNG+WV +P A V+QKF RLLA+CHTA+PE DEE+G +SYEA
Sbjct: 481 VDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEA 540
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDEAAFV+AARE GFEF+ RTQ IS ELD V+G KVER Y LLNVLEF+S+RKRMS
Sbjct: 541 ESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMS 600
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR ++G LLLLSKGAD+VMFERLA+NGR+FE +T+EH+N+YADAGLRTL+LAYRE+DE
Sbjct: 601 VIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDE 660
Query: 654 KEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLA 713
EY +FN+ F EAK SVS DR GATAVEDKLQNGVPECIDKLA
Sbjct: 661 NEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLA 720
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXX 773
QAGIK+WVLTGDKMETAINIGFA SLLRQ M+Q+II+ ETP+ K+
Sbjct: 721 QAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASR 780
Query: 774 XXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
V+ QL GK LL +S S ALIIDGKSLTYALED++K +FL+LA CASVICCRS
Sbjct: 781 ESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRS 840
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ
Sbjct: 841 SPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 900
Query: 894 FRFLERLLLVHGHWCYRRISSMVCF 918
FR+LERLLLVHGHWCY RI+SM+C+
Sbjct: 901 FRYLERLLLVHGHWCYSRIASMICY 925
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3167 (1119.9 bits), Expect = 0., P = 0.
Identities = 626/922 (67%), Positives = 720/922 (78%)
Query: 5 RRKKHHFSRIHAFSCGKTSFKGDHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYVRTTK 64
RR++ H S I+AF K++F+ DHS IGGPGFSRVV+CN+P S A NY GNYVR+TK
Sbjct: 5 RRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTK 64
Query: 65 YTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLE 124
YTLA+F PK+LFEQFRRVAN YFL+ +LS T LSPYS +S +LPL VI A+M KE +E
Sbjct: 65 YTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIE 124
Query: 125 DWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILLSSSYEE 184
DW RKKQDIE+NNRKVKVH G G F WRDL FFPADL+LLSSSYE+
Sbjct: 125 DWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYED 184
Query: 185 AICYVETTNLDGETNLKLKQALDATSN-MHEDSNFQNFKAIIRCEDPNANLYTFVGSXXX 243
+ICYVET NLDGETNLK+KQ L+ATS+ +HEDS+F+ KA+++CEDPNA+LYTFVG+
Sbjct: 185 SICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHF 244
Query: 244 XXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMDKII 303
RDSKLRNT+ IYG V+FTG DTKV QNST PPSKRS++ER+MDKII
Sbjct: 245 EEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKII 304
Query: 304 YFLFGILVLMSFIGSIFFGIATREDL--QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361
Y +FG++ LMSFIGSI FGI TRED G+ +RWYLRPD+ ++DP RA +AAV HF
Sbjct: 305 YLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHF 364
Query: 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVD 421
TA+MLY Y IPISLYVSIEIVK+LQS+FIN D+ MYYEE DKPA ARTSNLNEELG VD
Sbjct: 365 FTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVD 424
Query: 422 TILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRK-GSPLEEEVTEEQEDKAS 480
TILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVER+MA R GS L + + D++
Sbjct: 425 TILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVVDQSG 484
Query: 481 --IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 538
IKGFNF DER+M G+WV + A V+QKF RLLA+CHTA+PE DE G +SYEAESPDE
Sbjct: 485 PKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDE 544
Query: 539 AAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 598
AAFV+AARE GFEF+ RTQ IS ELD +G VER Y LLNVLEF+S+RKRMSVIVR
Sbjct: 545 AAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSVIVRD 604
Query: 599 EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658
E+G LLLLSKGAD+VMFERLA+NGR+FEE+T+EH+NEYADAGLRTLILAYRE+DE EY +
Sbjct: 605 EDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIE 664
Query: 659 FNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIK 718
F++ F EAKNSV+ADR GATAVEDKLQNGVP+CIDKLAQAGIK
Sbjct: 665 FSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIK 724
Query: 719 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLH 778
+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ETP K V++
Sbjct: 725 IWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVN 784
Query: 779 QLIRGKELL--DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK 836
Q+ GK LL SS S ALIIDGKSLTYALEDD K FL+LA GCASVICCRSSPK
Sbjct: 785 QMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPK 844
Query: 837 QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896
QKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR+
Sbjct: 845 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRY 904
Query: 897 LERLLLVHGHWCYRRISSMVCF 918
LERLLLVHGHWCY RISSM+C+
Sbjct: 905 LERLLLVHGHWCYSRISSMICY 926
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1396 (496.5 bits), Expect = 1.4e-282, Sum P(2) = 1.4e-282
Identities = 271/445 (60%), Positives = 334/445 (75%)
Query: 474 EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 533
+Q IKGF+FED+R+M G+W+NEP++D I FLR+LA+CHTA+PEVDE+ GK +YEA
Sbjct: 511 DQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEA 570
Query: 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593
ESPDE AF++AA E GFEF +RTQ+S+ + E +G VER Y +LNVL+F+S RKRMS
Sbjct: 571 ESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMS 628
Query: 594 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 653
VIVR E+G +LLL KGADS++FERL++NG+ + E T +H+N Y +AGLRTL L+YR+LDE
Sbjct: 629 VIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDE 688
Query: 654 KEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLA 713
EY +N EF +AK SV ADR GATAVEDKLQ GVP+CIDKLA
Sbjct: 689 TEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLA 748
Query: 714 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXX 773
QAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I+ E +
Sbjct: 749 QAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNEEGSSQDPEAAAREN----- 803
Query: 774 XXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 833
+L Q+I +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR
Sbjct: 804 --ILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRV 861
Query: 834 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893
SPKQKALVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQ
Sbjct: 862 SPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQ 921
Query: 894 FRFLERLLLVHGHWCYRRISSMVCF 918
FRFLERLL+VHGHWCY+RI+ M+C+
Sbjct: 922 FRFLERLLVVHGHWCYKRIAQMICY 946
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1384 (492.3 bits), Expect = 6.3e-278, Sum P(2) = 6.3e-278
Identities = 274/482 (56%), Positives = 345/482 (71%)
Query: 443 IAGTSYGRGVTEVERAMARRKGSPLEEE--VT----EEQEDKASIKGFNFEDERIMNGSW 496
+A S +G T+ +A + S E E VT ++Q+ +KGF+FED R+MN +W
Sbjct: 474 VANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENW 533
Query: 497 VNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 556
+NEP++D I F R+LA+CHTA+PEVDE+ G +YEAESPDE AF++A+RE GFEF +RT
Sbjct: 534 LNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRT 593
Query: 557 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE 616
Q+S+ + E +G V+R Y +LN+L+F+S RKRMS IVR EEG +LLL KGADS++FE
Sbjct: 594 QSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFE 653
Query: 617 RLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXX 676
RL+++G+E+ T +H+N Y +AGLRTL L YR+LDE EY +N EF +AK SV ADR
Sbjct: 654 RLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDE 713
Query: 677 XXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736
GATAVEDKLQ GVP+CID LAQAG+K+WVLTGDKMETAINIG+A
Sbjct: 714 MLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYA 773
Query: 737 CSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGP 796
CSLLRQGM+Q+ IS E + +L Q+ +++ +
Sbjct: 774 CSLLRQGMKQISISLTNVEESSQNSEAAAKES-------ILMQITNASQMIKIEKDPHAA 826
Query: 797 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 856
ALIIDGK+LTYAL+DDVK FL LA+ CASVICCR SPKQKALVTRL K T TTLAI
Sbjct: 827 FALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAI 886
Query: 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMV 916
GDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ M+
Sbjct: 887 GDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 946
Query: 917 CF 918
C+
Sbjct: 947 CY 948
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1384 (492.3 bits), Expect = 5.2e-274, Sum P(2) = 5.2e-274
Identities = 271/441 (61%), Positives = 331/441 (75%)
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
+A IKGF FED R+MNG+W+ E + I +F R+LAICHTA+PE++EE GK +YEAESPD
Sbjct: 506 RAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPD 565
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
EA+F+ AARE GFEF++RTQ+S+ + E +G +ER Y +LN+LEF+S RKRM+VIVR
Sbjct: 566 EASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVR 625
Query: 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 657
EEG +LLL KGADS++FERLA+NG+ + T H+ EY +AGLRTL LAYR+LDE EY
Sbjct: 626 DEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLRTLALAYRKLDEDEYA 685
Query: 658 QFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGI 717
+N EF +AK S+ +DR GATAVEDKLQ GVP+CIDKLAQAG+
Sbjct: 686 AWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGL 745
Query: 718 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVL 777
KLWVLTGDKMETAINIGFACSLLRQGMRQ+ I+S E + +L
Sbjct: 746 KLWVLTGDKMETAINIGFACSLLRQGMRQICITSMNSEGGSQDSKRVVKEN-------IL 798
Query: 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ 837
+QL + +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR SPKQ
Sbjct: 799 NQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQ 858
Query: 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897
KALV RLVK T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFL
Sbjct: 859 KALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 918
Query: 898 ERLLLVHGHWCYRRISSMVCF 918
ERLL+VHGHWCY+RI+ M+C+
Sbjct: 919 ERLLVVHGHWCYKRIAQMICY 939
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2578 (912.6 bits), Expect = 4.8e-268, P = 4.8e-268
Identities = 523/936 (55%), Positives = 651/936 (69%)
Query: 3 GNRRKKHHFSRIHAFSCGKTSF-KG-DHSLIGGPGFSRVVHCNDPESFEASVLNYSGNYV 60
G R K S I+ F C + S +G D I GPGFSR V+CN P + L Y NYV
Sbjct: 4 GRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRSNYV 63
Query: 61 RTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGK 120
TT+Y L TFFPK L+EQF R AN YFL+ AILS PLSP++ S + PLV V+G +M K
Sbjct: 64 STTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLSMLK 123
Query: 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPADLILLSS 180
E LEDW R QD+++N KV VH +G F KW+ + FFPADL+LLSS
Sbjct: 124 EALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLLLSS 183
Query: 181 SYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGS 240
SYE+ ICYVET NLDGETNLK+K++L+ T ++ + +F++F IIRCEDPN +LYTFVG+
Sbjct: 184 SYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGN 243
Query: 241 XXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRMD 300
RDSKLRNT +YG V+FTG DTKV QNST PSKRS++E+ MD
Sbjct: 244 LEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMD 303
Query: 301 KIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360
IIY L +L+L+S I S F T+ + K WYLRP++ +P A +H
Sbjct: 304 YIIYTLLVLLILISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVH 359
Query: 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
+TAL+LYGYLIPISLYVSIE+VK+LQ+ FIN+DLHMY E+ PA ARTSNLNEELGQV
Sbjct: 360 LITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQV 419
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEE--EVTE----- 473
DTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE A A++ L+E EV+
Sbjct: 420 DTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTP 479
Query: 474 -------EQEDKAS----IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV 522
E E + IKGF FED R+M+G+W+ EPH D I F R+LAICHTA+PE+
Sbjct: 480 RAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPEL 539
Query: 523 DEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582
+EE GK +YEAESPDEA+F+ AA E GF F++RTQ+S+ VHE +G +ER Y +LN+
Sbjct: 540 NEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNL 599
Query: 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLR 642
L+F+S RKRMSV+VR EEG +LLL KGADS++FERLA+NG+ + T +H+NEY +AGLR
Sbjct: 600 LDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLR 659
Query: 643 TLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQ 702
TL L+YR+LDE+EY +N EF +AK S+ +DR GATAVEDKLQ
Sbjct: 660 TLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQ 719
Query: 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXX 762
GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CSLLRQGM+Q+ I+ E +
Sbjct: 720 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQDAK 779
Query: 763 XXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822
+L+Q+ + +++ + ALIIDGK+LTYALED++K FL LA
Sbjct: 780 AVKDN--------ILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALA 831
Query: 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 882
+ CASVICCR SPKQKALVTRLVK T TLAIGDGANDVGM+QEADIGVGISGVEGMQ
Sbjct: 832 VDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
Query: 883 AVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCF 918
AVM+SD +IAQFRFLERLL+VHGHWCY+RI+ M+C+
Sbjct: 892 AVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 927
|
|
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1997 (708.0 bits), Expect = 1.8e-206, P = 1.8e-206
Identities = 422/888 (47%), Positives = 563/888 (63%)
Query: 38 RVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP 97
R V+CND ES + + + GN + TTKY + TF PK LFEQFRR+AN+YFL + LS TP
Sbjct: 36 RTVYCNDRESNQP--VRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP 93
Query: 98 LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDL 157
+SP S ++NV PL +V+ ++ KE EDW+R + D+ +NN V++ + + WR L
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEI-LQDQQWVSIPWRKL 152
Query: 158 XXXXXXXXXXXXFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSN 217
FFPAD++ +SS+ + ICYVET NLDGETNLK+++AL+ T +
Sbjct: 153 QVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEK 212
Query: 218 FQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGR 277
FK I+CE PN +LYTF G+ R LRNT+ I GAV+FTG
Sbjct: 213 AYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGH 272
Query: 278 DTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT-REDLQDGKMKR 336
+TKV N+ PSKRS +E+++DK+I +F +LV M IG+I I T RED G
Sbjct: 273 ETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYLG---- 328
Query: 337 WYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI-FINQDL 395
L D ++ + + F T + L+ +IPISLYVSIE++K +QS FIN+DL
Sbjct: 329 --LHNSD----WEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRDL 382
Query: 396 HMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEV 455
+MY+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+
Sbjct: 383 NMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEI 442
Query: 456 ERAMARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 513
E+ +A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LA
Sbjct: 443 EKGIAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLA 498
Query: 514 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 573
ICHT LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K+
Sbjct: 499 ICHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKI 558
Query: 574 ER-SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 632
+ +Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH
Sbjct: 559 QDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREH 618
Query: 633 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXX 692
+ + +GLRTL LAY++L+ + Y +NE+F +AK+++ DR
Sbjct: 619 LEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILI 677
Query: 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 752
G+TA+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSE
Sbjct: 678 GSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSE 737
Query: 753 TPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESL-GP-LALIIDGKSLTYAL 810
T + V +L + E S ++ GP L+L+IDGK L YAL
Sbjct: 738 TDAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYAL 797
Query: 811 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 870
+ ++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q A
Sbjct: 798 DPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAH 857
Query: 871 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCF 918
+G+GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI +V +
Sbjct: 858 VGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMY 905
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1296 (461.3 bits), Expect = 1.6e-186, Sum P(2) = 1.6e-186
Identities = 293/728 (40%), Positives = 426/728 (58%)
Query: 35 GFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILS 94
G SR + N PE + N + TTKYT +F PK L+EQFRR AN YFL+ A++
Sbjct: 160 GSSRNIFINQPE--RNIPFKFIHNKISTTKYTPWSFIPKNLYEQFRRAANFYFLVIAVIQ 217
Query: 95 FTP-LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTK 153
P +SP +A + +PL+ V+ T KE +ED +R D VNN ++ G F+
Sbjct: 218 LIPGISPVNAYTTWIPLIFVLAVTAVKEGIEDIKRNLSDKTVNNLDCRI-LRNGKFEIVP 276
Query: 154 WRDLXXXXXXXXXXXXFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSN-M 212
W+ + FPADL++L+SS + +CY+ET+NLDGETNLK +QA+ T +
Sbjct: 277 WKQVKVGDICQVNKGERFPADLVVLNSSEQHGVCYIETSNLDGETNLKQRQAIPQTFEIL 336
Query: 213 HEDSNFQNFKAIIRCEDPNANLYTFVGSXXXXXXXXXX--XXXXXXXRDSKLRNTDCIYG 270
+ + +F+ I CE PN +Y + G+ R LRNT+ IYG
Sbjct: 337 RSEEDLAHFRGNIECEHPNNVIYVYNGAIQMTDDSQKHPLNNTQTLLRGCVLRNTEWIYG 396
Query: 271 AVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQ 330
AV++TG DTK+ QNST PSKRS +E+ +++ + LF I+ ++ +G I I T ++
Sbjct: 397 AVVYTGEDTKLMQNSTDAPSKRSTLEKLVNRALINLFIIMFVVCVVGMIVSVILTSTNID 456
Query: 331 DGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIF 390
K+WYL D ++ K AVL+ + ++ + +IPISLYVS+E+VK+ Q+++
Sbjct: 457 ----KQWYL---D----FEQKDVR-KAVLNLFSFMIAFAVMIPISLYVSLELVKVAQAVY 504
Query: 391 INQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR 450
+ D+ MY ET+ PAR RTSNL+EELGQ++ I SDKTGTLT N M+F+KCS+ YG
Sbjct: 505 VGWDVKMYDPETNTPARTRTSNLSEELGQIEYIFSDKTGTLTRNQMDFLKCSVGKMVYGN 564
Query: 451 GVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMN--GSWVNEPHADVIQKF 508
E + + + G +E V + + F F+D RI+ N + +I +F
Sbjct: 565 VEREDDASSNKPYGIAMEGIVGADPK-------FGFKDRRIITHLDEDKNSEQSFLINEF 617
Query: 509 LRLLAICHTALPE-VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 567
L LLA+CH+ +P+ ++++ +I YEA SPDEAA V AA+ LG+ FY R T V+
Sbjct: 618 LTLLAVCHSVVPDRPNKDDSEIIYEASSPDEAALVSAAKNLGYAFYNRDPTGCLVN---- 673
Query: 568 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 627
+ G K+ER + +LNVLEF+S RKRMSVI R+ +G ++L KGAD+ + L ++ E
Sbjct: 674 IRG-KIER-FEVLNVLEFNSDRKRMSVICRNPQGRIILYCKGADTTVLPLLRKDQEELYS 731
Query: 628 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXX 687
T E + ++A GLRTL LAY L+E++Y+Q+NE + EA S+ DR
Sbjct: 732 ITLEFLQDFAADGLRTLCLAYTYLEEEDYQQWNELYKEAAISIQ-DRDMKVDKVSELIER 790
Query: 688 XXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747
G+TA+EDKLQ GVP+ I L +A IK+WVLTGDK ETAINIGF+C LL MR +
Sbjct: 791 NLSLIGSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMRII 850
Query: 748 IISSETPE 755
I++ E
Sbjct: 851 ILNGSNQE 858
|
|
| UNIPROTKB|E1BPC3 ATP8B1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 877 (313.8 bits), Expect = 8.4e-174, Sum P(3) = 8.4e-174
Identities = 205/514 (39%), Positives = 290/514 (56%)
Query: 55 YSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVV 113
Y+ N ++T KY TF P LFEQF+R AN YFL+ IL P +S + + ++PL+VV
Sbjct: 92 YANNAIKTYKYNALTFLPMNLFEQFKRAANFYFLVLLILQAIPQISTLAWYTTLVPLLVV 151
Query: 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLXXXXXXXXXXXXFFPA 173
+G T K++++D R K D EVNNR +V +G F KW+D+ F PA
Sbjct: 152 LGVTAVKDLVDDVARHKMDKEVNNRTCEV-IKDGRFKVAKWKDIQVGDVIRLKKNDFIPA 210
Query: 174 DLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSN-MHEDSNFQNFKAIIRCEDPNA 232
D++LLSSS ++CYVET LDGETNLK K AL+ T + E+++ F I CE+PN
Sbjct: 211 DILLLSSSEPNSLCYVETAELDGETNLKFKMALEITHQYLQEENSLATFDGFIECEEPNN 270
Query: 233 NLYTFVGSXXXXXXXXXXXXXXXXXRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKR 292
L F G+ R +RNTD +G VIF G D+K+ +NS KR
Sbjct: 271 RLDKFTGTLFWKNTSFPLDADKILLRGCVIRNTDFCHGLVIFAGADSKIMKNSGKTRFKR 330
Query: 293 SKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRP-DDTTAYYDPK 351
+K++ M+ ++Y +F +L+L+S + G A E Q G WYL +D+T Y
Sbjct: 331 TKIDYLMNYMVYTIFVVLILLS--AGLAIGHAYWE-AQVGNFS-WYLYDGEDSTPSY--- 383
Query: 352 RAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTS 411
L+F +++ L+PISLYVS+E++++ QS FIN DL MYY E D PA+ART+
Sbjct: 384 ----RGFLNFWGYIIVLNTLVPISLYVSVEVIRLGQSYFINWDLQMYYPEKDTPAKARTT 439
Query: 412 NLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEV 471
LNE+LGQ+ I SDKTGTLT N M F KC I G YG + + + K P++
Sbjct: 440 TLNEQLGQIHYIFSDKTGTLTQNVMTFKKCCINGQIYGDHRDASQNSHS--KIEPVDFSW 497
Query: 472 TEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISY 531
+ K ++ E+I +G +P +Q+F LLA+CHT + D NG+++Y
Sbjct: 498 NAFADGKLEFYD-HYLIEQIQSGK---QPE---VQQFFFLLAMCHTVM--ADRLNGQLNY 548
Query: 532 EAESPDEAAFVIAARELGFEFYERTQTSISVHEL 565
+A SPDE A V AAR GF F RTQ +I++ EL
Sbjct: 549 QAASPDEGALVSAARNFGFVFLGRTQNTITISEL 582
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SX33 | ALA9_ARATH | 3, ., 6, ., 3, ., 1 | 0.7334 | 0.9730 | 0.7525 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XII.101.1 | aminophospholipid ATPase (1183 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 928 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-119 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-48 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-30 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-27 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-17 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-16 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-12 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-10 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-10 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 4e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-07 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-05 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 6e-04 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 0.001 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.003 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1170 bits (3030), Expect = 0.0
Identities = 455/867 (52%), Positives = 603/867 (69%), Gaps = 34/867 (3%)
Query: 55 YSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVV 113
+ N + TTKYT+ TF PK LFEQF+R AN+YFL+ A+L P LSP ++++PL V
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPA 173
+ T KE +ED RR+++D EVNNR +V G G F W+DL+VGD+VKV+KDE PA
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 174 DLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNAN 233
DL+LLSSS + +CYVET NLDGETNLKL+QAL+ T M ++ + +NF I CE PNA+
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 234 LYTFVGSLELEE-QQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKR 292
LY+F G++ + +QYPL+P +LLR LRNTD + G V++TG DTK+ +N+T PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 293 SKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352
S++E+ ++ +I LF +L ++ I S+ GI +D WY+R D + +
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKD----LWYIRLDVS-----ERN 291
Query: 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSN 412
AA FLT L+L+ LIPISLYVS+E+VK +Q+ FIN DL MY+E+TD PA RTSN
Sbjct: 292 AAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSN 351
Query: 413 LNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVT 472
LNEELGQV+ I SDKTGTLT N MEF KCSIAG SYG G TE++ + R GS +E E +
Sbjct: 352 LNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENS 411
Query: 473 EEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKISY 531
E KGF F D R+++ N+P+A I +F LA+CHT +PE D+ +I+Y
Sbjct: 412 MLVE----SKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467
Query: 532 EAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKR 591
+A SPDEAA V AAR++GF F+ERT SIS+ + G + Y +LNVLEF+S RKR
Sbjct: 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLI--EMHG--ETKEYEILNVLEFNSDRKR 523
Query: 592 MSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYREL 651
MSVIVR+ +G + LL KGAD+V+F+RL+ G + E+TKEH+ YA GLRTL +AYREL
Sbjct: 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYREL 583
Query: 652 DEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 711
E+EY+++NEE+ EA ++ DREE + +AE IEK+LILLGATA+EDKLQ GVPE I+
Sbjct: 584 SEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIEL 642
Query: 712 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAA 771
L QAGIK+WVLTGDK+ETAINIG++C LL + M Q++I+S++ ++ ++ K
Sbjct: 643 LRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEAAIKFG---- 698
Query: 772 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC 831
L+ + L DS N +AL+IDGKSL YAL+++++ FL+LA+ C +VICC
Sbjct: 699 LEGTSEEFN----NLGDSGN-----VALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749
Query: 832 RSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI 891
R SP QKA V RLVK T TTLAIGDGANDV M+QEAD+GVGISG EGMQAVM+SD AI
Sbjct: 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAI 809
Query: 892 AQFRFLERLLLVHGHWCYRRISSMVCF 918
QFRFL +LLLVHG W Y+RIS M+ +
Sbjct: 810 GQFRFLTKLLLVHGRWSYKRISKMILY 836
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 654 bits (1689), Expect = 0.0
Identities = 351/903 (38%), Positives = 523/903 (57%), Gaps = 54/903 (5%)
Query: 37 SRVVHCNDP----ESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAI 92
+R+V+ NDP E FE ++GN +RT KY++ +F P+ LFEQF RVA +YFL+ A+
Sbjct: 70 ARLVYLNDPEKSNERFE-----FAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAV 124
Query: 93 LSFTP-LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDY 151
L+ P L+ + +++LPL V+ T K+ EDWRR + D NNR V + F
Sbjct: 125 LNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWV-LVDDQFQE 183
Query: 152 TKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDAT-S 210
KW+D++VG+++K++ ++ P D++LLS+S + YV+T NLDGE+NLK + A T S
Sbjct: 184 KKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLS 243
Query: 211 NMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYG 270
+ E + +I+CE PN N+Y F ++E++ ++ L P ++LR +L+NT G
Sbjct: 244 KIPEK---EKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIG 300
Query: 271 AVIFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQ 330
++ GR+TK N++G PSKRS++E RM+ I L L+ + I S+ + R
Sbjct: 301 VAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRD 360
Query: 331 DGKMKRWYLRPD------DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 384
+ +Y R D YY FL +++++ +IPISLY+S+E+V+
Sbjct: 361 ELDTIPFYRRKDFSEGGPKNYNYYG---WGWEIFFTFLMSVIVFQIMIPISLYISMELVR 417
Query: 385 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIA 444
+ Q+ F+ +D MY E ++ + R N+NE+LGQ+ + SDKTGTLT N MEF SI
Sbjct: 418 VGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477
Query: 445 GTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 504
G Y G T + A ++ ++ K +K + + + E A
Sbjct: 478 GVDYSDGRTPTQNDHAGYSVE-VDGKILRP---KMKVK-VDPQLLELSKSGKDTE-EAKH 531
Query: 505 IQKFLRLLAICHTALPEVDEENGK-----ISYEAESPDEAAFVIAARELGFEFYERTQTS 559
+ F LA C+T +P V ++ + Y+ ESPDE A V AA GF ERT
Sbjct: 532 VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGH 591
Query: 560 ISVHELDPVTGTKVERS-YSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERL 618
I V ER +++L + EF S RKRMSVI+ + T+ + KGAD+ MF +
Sbjct: 592 I-------VIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVI 644
Query: 619 AEN-GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREEL 677
+ T+ H++ Y+ GLRTL++ REL++ E++Q++ F EA ++ R L
Sbjct: 645 DRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSF-EAASTALIGRAAL 703
Query: 678 AEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737
++A +E NL +LGA+A+EDKLQ GVPE I+ L AGIK+WVLTGDK ETAI+IG++
Sbjct: 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSS 763
Query: 738 SLLRQGMRQVIISSETPES--KTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLG 795
LL M Q+II+S + ES K+LE A + K + + + + SS +
Sbjct: 764 KLLTNKMTQIIINSNSKESCRKSLE-----DALVMSKKLTTVSGISQNTGG--SSAAASD 816
Query: 796 PLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLA 855
P+ALIIDG SL Y L+ ++++ +LA C+ V+CCR +P QKA + LVK +TS TLA
Sbjct: 817 PVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLA 876
Query: 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSM 915
IGDGANDV M+Q AD+GVGISG EG QAVM+SD A+ QFRFL LLLVHGHW Y+R+ M
Sbjct: 877 IGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYM 936
Query: 916 VCF 918
+ +
Sbjct: 937 ILY 939
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 383 bits (987), Expect = e-119
Identities = 198/883 (22%), Positives = 311/883 (35%), Gaps = 233/883 (26%)
Query: 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSF---TPLSPYSAVS 105
E + + K L + + L+ A+LS +
Sbjct: 49 EVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL-LLVAALLSAFVGDWVDAGVDAI 107
Query: 106 NVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKV 165
+L +VV+ + + + ++++ K KV +G F +L GD+V +
Sbjct: 108 VILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLL 166
Query: 166 EKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAII 225
E + PADL LL SS V+ + L GE+ KQAL
Sbjct: 167 EAGDVVPADLRLLESSDL----EVDESALTGESLPVEKQALP------------------ 204
Query: 226 RCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNS 285
L + L +L + + + G V+ TG +T+ + +
Sbjct: 205 ---------------LTKSDAPLGLDRDNMLFSGTTVVSGRAK-GIVVATGFETEFGKIA 248
Query: 286 TGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTT 345
P+K+ K+ +LVL +G++ F + +
Sbjct: 249 RLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGL-----------FRGGNGLLE 297
Query: 346 AYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKP 405
+ FLTAL L +P L + I L + + +D +
Sbjct: 298 S--------------FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV------- 336
Query: 406 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGS 465
R+ N E LG VD I SDKTGTLT N M K I G
Sbjct: 337 ---RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG------------------ 375
Query: 466 PLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEE 525
+ D +K FL A+C++ PE +
Sbjct: 376 --------KDIDDKDLKDSPALLR------------------FLLAAALCNSVTPEKNGW 409
Query: 526 NGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEF 585
Y+A P E A V A +LGF +E Y +L + F
Sbjct: 410 -----YQAGDPTEGALVEFAEKLGFSLDLS----------------GLEVEYPILAEIPF 448
Query: 586 SSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE------EQTKEHINEYADA 639
S RKRMSVIV+++EG +L KGA V+ ER G +E + E A
Sbjct: 449 DSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASE 508
Query: 640 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVED 699
GLR L +AY++LD E ++ ++IE +L+ LG T +ED
Sbjct: 509 GLRVLAVAYKKLDRAE----------------------KDDEVDEIESDLVFLGLTGIED 546
Query: 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 759
+ V E I++L +AGIK+W++TGD +ETAI I C + +
Sbjct: 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE--------------- 591
Query: 760 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819
AL+IDG L ++++ +L
Sbjct: 592 -------------------------------------SALVIDGAELDALSDEELAELVE 614
Query: 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 879
EL+ + R SP+QKA + ++ K+ GDG ND L+ AD+G+ + G E
Sbjct: 615 ELS------VFARVSPEQKARIVEALQ-KSGHVVAMTGDGVNDAPALKAADVGIAMGG-E 666
Query: 880 GMQAVMSSD--IAIAQFRFLERLLLVHGHWCYRRISSMVCFTL 920
G A + + + L +V G Y I + + L
Sbjct: 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLL 709
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 2e-48
Identities = 91/388 (23%), Positives = 139/388 (35%), Gaps = 77/388 (19%)
Query: 104 VSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVV 163
L LV V+ K ED R D VN R V + +DL GDVV
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVL--RNGWKEIPAKDLVPGDVV 58
Query: 164 KVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKA 223
V+ E PAD +LLS S C+V+ +NL GE+N LK AL T +
Sbjct: 59 LVKSGETVPADGVLLSGS-----CFVDESNLTGESNPVLKTALKETQS-----------G 102
Query: 224 IIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283
I + A Y F G+L + + + + T V+ TG +T+
Sbjct: 103 TITGDLVFAGTYVFGGTLIVV------------VTPTGILTTVGRIAVVVKTGFETR--- 147
Query: 284 NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDD 343
+ R++ I+ LF +L+ ++ +F + +
Sbjct: 148 ------TPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGWD-----PNSIFKA------ 190
Query: 344 TTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETD 403
L AL++ ++P +L ++ + D +
Sbjct: 191 -----------------LLRALIVLVIVVPPALPAAVTVAL------AVGDARLA----K 223
Query: 404 KPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRK 463
K R N EELG+VD + SDKTGTLT N M I G + V
Sbjct: 224 KGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYLS 283
Query: 464 GSPLEEEVTEEQEDKASIKGFNFEDERI 491
G P+E+ + + E N E + +
Sbjct: 284 GDPMEKALLKSAELVGKADKGNKEYKIL 311
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 4e-30
Identities = 108/470 (22%), Positives = 176/470 (37%), Gaps = 91/470 (19%)
Query: 418 GQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQED 477
G++D DKTGTLT + ++ RGV + K + E +
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL-----------RGVQGLSGNQEFLK---IVTEDSSL--- 488
Query: 478 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537
+ LA CH +L ++ GK+ +
Sbjct: 489 --------------------------KPSITHKALATCH-SLTKL---EGKLVGDPLDKK 518
Query: 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597
E E E T V DP + S++ +FSS+ +RMSVIV
Sbjct: 519 MFEATGWTLEEDDESAEPTSILAVVRTDDP------PQELSIIRRFQFSSALQRMSVIVS 572
Query: 598 -SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEY 656
++E + KGA + + +E + Y G R L LAY+EL +
Sbjct: 573 TNDERSPDAFVKGAPETIQSLC--SPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTL 630
Query: 657 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 716
++ + R+ + E NL LG E+ L+ E I +L +A
Sbjct: 631 QKAQD----------LSRDAV--------ESNLTFLGFIVFENPLKPDTKEVIKELKRAS 672
Query: 717 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES------KTLEKSEDKSAAAA 770
I+ ++TGD TA+++ C ++ ++ +E PES K A+
Sbjct: 673 IRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAST- 731
Query: 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 830
V G++ ++ S LA + GK+ L+ +L L L +
Sbjct: 732 ----QVEIPYPLGQDSVEDLLASRYHLA--MSGKAF-AVLQAHSPELLLRLLSHTT--VF 782
Query: 831 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 880
R +P QK + L++ K T GDGAND G L++AD+G+ +S E
Sbjct: 783 ARMAPDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-27
Identities = 56/216 (25%), Positives = 81/216 (37%), Gaps = 61/216 (28%)
Query: 524 EENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVL 583
+Y + P E A + +A +G + Y +L+V
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKGNKE-------------------YKILDVF 314
Query: 584 EFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRT 643
FSS KRMSVIV + +G+ LL KGA + ER +E E A GLR
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC--------NNYEEKYLELARQGLRV 366
Query: 644 LILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 703
L A +EL++ +L LG ED L+
Sbjct: 367 LAFASKELED----------------------------------DLEFLGLITFEDPLRP 392
Query: 704 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739
E I++L AGIK+ ++TGD + TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 86.8 bits (215), Expect = 3e-17
Identities = 118/498 (23%), Positives = 180/498 (36%), Gaps = 122/498 (24%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG I SDKTGTLT N M K S + E
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVALDPS--------------------SSSLNEF 323
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
+ + E I + V +++ + A+C+ + +D K YE
Sbjct: 324 CVTGTT---YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS--SLDFNERKGVYEKV 378
Query: 535 S-PDEAAFVIAARELGFEFYERTQTSISVHELD--PVTGTKVERSYSLLNVLEFSSSRKR 591
EAA + ++G + +S L V K ++ L LEFS RK
Sbjct: 379 GEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKK----LATLEFSRDRKS 434
Query: 592 MSVIVRSEEGTLLLLSKGADSVMFER----LAENGR------EFEEQTKEHINEYADA-G 640
MSV+ + G L KGA + ER L +GR + + I E
Sbjct: 435 MSVLCKPSTGNKLF-VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKA 493
Query: 641 LRTLILAYRE-LDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVED 699
LR L LA+++ D +E + A A IE +L +G + D
Sbjct: 494 LRCLALAFKDIPDPREED---------------LLSDPANFEA--IESDLTFIGVVGMLD 536
Query: 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 759
+ V + I+K AGI++ ++TGD ETA I C R++ I S
Sbjct: 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C-------RRIGIFSPD------ 580
Query: 760 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819
E KS G+E + +GP
Sbjct: 581 EDVTFKS--------------FTGREF-----DEMGPAK--------------------- 600
Query: 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI-SGV 878
+ A ++V+ R P K+ + L++ + + GDG ND L++ADIG+ + SG
Sbjct: 601 QRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMT-GDGVNDAPALKKADIGIAMGSGT 659
Query: 879 EGMQAVMSSDIAIAQFRF 896
E A +SD+ +A F
Sbjct: 660 E--VAKEASDMVLADDNF 675
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 2e-16
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 573 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVM----FERLAENG--REFE 626
V ++ + F+S RK MSV+V+ G KGA ++ +RL NG
Sbjct: 468 VRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPIS 527
Query: 627 EQ----TKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 682
+ + I A LRT+ LAYR+ +E R++
Sbjct: 528 DDDKDRCADVIEPLASDALRTICLAYRDFAPEE----------------FPRKDYPN--- 568
Query: 683 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742
K L L+G ++D L+ GV E + + +AGI + ++TGD ++TA I C +L
Sbjct: 569 ----KGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF 624
Query: 743 GMRQVIISSETPESKTLEKSE 763
G ++ E E ++L E
Sbjct: 625 G----GLAMEGKEFRSLVYEE 641
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 5e-12
Identities = 96/481 (19%), Positives = 162/481 (33%), Gaps = 177/481 (36%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG V+ I SDKTGTLT N M K +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG---------------------------- 350
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
+ N E I++G ++ + + + L +C+ N K EA+
Sbjct: 351 LHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN---------NAKFRNEAD 401
Query: 535 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590
+ P + A + + G + + +T I V E+ FSS RK
Sbjct: 402 TLLGNPTDVALIELLMKFGLD--DLRETYIRVAEV------------------PFSSERK 441
Query: 591 RMSV-IVRSEEGTLLLLSKGADSVMFERLAE--------NGR--EFEEQTKEHINE---- 635
M+V V ++ + + KGA +E++ + +G+ +Q ++ I E
Sbjct: 442 WMAVKCVHRQDRSEMCFMKGA----YEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAE 497
Query: 636 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN-LILLGA 694
A AGLR + A EK L LG
Sbjct: 498 MASAGLRVIAFAS-----------------------------------GPEKGQLTFLGL 522
Query: 695 TAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP 754
+ D + GV E + L G+++ ++TGD ETA++I R++ + S+T
Sbjct: 523 VGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA----------RRLGMPSKTS 572
Query: 755 ESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV 814
+S + G++L ++ L +
Sbjct: 573 QSVS------------------------GEKLDAMDDQQL-----------------SQI 591
Query: 815 KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 874
+ R+SP+ K + + ++ K GDG ND L+ ADIGV
Sbjct: 592 VP---------KVAVFARASPEHKMKIVKALQ-KRGDVVAMTGDGVNDAPALKLADIGVA 641
Query: 875 I 875
+
Sbjct: 642 M 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 1e-10
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 22/107 (20%)
Query: 513 AICHTALPEVDEENGKISYEAE-SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 571
A+C+ A + E K E P E+A ++ A +LG I V EL
Sbjct: 1 ALCNDA--KFGENEEKNGGEIIGDPTESALLVFAEKLG----------IDVEEL------ 42
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFER 617
Y + + F+S RKRMS + + E + L KGA + ER
Sbjct: 43 --RARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 2e-10
Identities = 115/518 (22%), Positives = 184/518 (35%), Gaps = 116/518 (22%)
Query: 415 EELGQVDTILSDKTGTLTCNSM--------EFIKCSIAGTSYGRGVTEVERAMARRKGSP 466
E LG V+ I SDKTGT+T M F SI + E + R SP
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRF-SP 412
Query: 467 LEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN 526
E E D+ +K F + + + D+ K L A+ + A D+
Sbjct: 413 YEYSHNEAA-DQDILKEFK---DELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT 468
Query: 527 GKISYEAESPDEAAFVIAARELGFEFY------------ERTQTSISVHELDPVTGTKVE 574
+ P E A + A++ E Q+S+S H P +
Sbjct: 469 DCWKAHGD-PTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA---- 523
Query: 575 RSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLAE-NGREFEEQT--- 629
+ + F S KRM+ I G T + +KGA + E + NG++ + +
Sbjct: 524 -QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLE 582
Query: 630 -------KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 682
++ A GLR L A + D+ + N E L A
Sbjct: 583 DCDRELIIANMESLAAEGLRVLAFASKSFDKAD-----------NNDDQLKNETLNRATA 631
Query: 683 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742
E +L LG + D +N ++K QAGI + +LTGD ETA I ++
Sbjct: 632 ES---DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688
Query: 743 GM---RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 799
R I+ S ++ G + S+E +
Sbjct: 689 NFIHDRDEIMDS---------------------------MVMTGSQFDALSDEEV----- 716
Query: 800 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859
DD+K L L +A R +P+ K + + + + + GDG
Sbjct: 717 ------------DDLKALCLVIA---------RCAPQTKVKMIEALHRRKAFCAMT-GDG 754
Query: 860 ANDVGMLQEADIGVGISGVEGMQ-AVMSSDIAIAQFRF 896
ND L+ A++G+ + G+ G A +SDI ++ F
Sbjct: 755 VNDSPSLKMANVGIAM-GINGSDVAKDASDIVLSDDNF 791
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-07
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 575 RSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENG--REFEEQT 629
Y ++ L F R+R+SV+V +G LL+ KGA M + + R +E
Sbjct: 437 AGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 630 KEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKI 685
+E + Y G R L++A RE+ E++ S
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPG----------GESRAQYSTAD----------- 535
Query: 686 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 725
E++L++ G D + I L + G+ + VLTGD
Sbjct: 536 ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 4e-07
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 79/294 (26%)
Query: 604 LLLSKGADSVMFERLAE---NGRE--FEEQTKEHIN----EYADAGLRTLILAYRELDEK 654
LL+ KGA + ER + +G+E +E+ KE E G R L + L ++
Sbjct: 478 LLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537
Query: 655 EYK---QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 711
++ QF+ T+ N + NL +G ++ D + VP+ + K
Sbjct: 538 QFPEGFQFD---TDDVNFPT---------------DNLCFVGLISMIDPPRAAVPDAVGK 579
Query: 712 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT------LEKSEDK 765
AGIK+ ++TGD TA I ++ +G +ET E + + +
Sbjct: 580 CRSAGIKVIMVTGDHPITAKAIAKGVGIISEG-------NETVEDIAARLNIPVSQVNPR 632
Query: 766 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC 825
A KA V+H G +L D ++E L + L Y E
Sbjct: 633 DA-----KACVVH----GSDLKDMTSEQLD--------EILKYHTE-------------- 661
Query: 826 ASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV--GISG 877
++ R+SP+QK ++ + + + GDG ND L++ADIGV GI+G
Sbjct: 662 --IVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADIGVAMGIAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 1e-05
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 879
+A + R SP+QK + ++ K GDG ND L++AD+G+ +
Sbjct: 421 AIAKELGIDVFARVSPEQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG--- 476
Query: 880 GMQAVMSSDIAIAQFRFLERLLLV-HGHWCYRRISSMVCFTL 920
A ++DI + + V G + I S + + +
Sbjct: 477 ---AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAI 515
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 637 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE-KNLILLGAT 695
A G+ +I A L ++ ++ + EEL A + +L++LG
Sbjct: 30 AALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLI 89
Query: 696 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 755
A+ D L G E + +L +AGIKL +LTGD TA I G+ ++S++
Sbjct: 90 ALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAI-----ARLLGLFDALVSADLYG 144
Query: 756 SKTLEKSEDKSAAAAA 771
+ K + K A
Sbjct: 145 LVGVGKPDPKIFELAL 160
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 0.001
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 36/152 (23%)
Query: 585 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENGR------EFEEQTKEHINE 635
F R+RMSV+V L+ KGA + ++ NG + K +
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDT 508
Query: 636 YADAGLRTLILAYREL--DEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 693
GLR + +A + L E +Y++ AD E +LIL G
Sbjct: 509 LNRQGLRVVAVATKYLPAREGDYQR-------------AD------------ESDLILEG 543
Query: 694 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 725
A D + + L +G+ + +LTGD
Sbjct: 544 YIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.003
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 576 SYSLLNVLEFSSSRKRMSVIVRS-EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHIN 634
Y +L + F KR V E G ++KGA V+ L +N +E EE+ +E ++
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVIL-DLCDNKKEIEEKVEEKVD 410
Query: 635 EYADAGLRTLILAY 648
E A G R L +A
Sbjct: 411 ELASRGYRALGVAR 424
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.004
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 32/152 (21%)
Query: 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMF---ERLAENGR------EFEEQTKEHI 633
+ F R+R+SV+V + L+ KGA M G + + ++
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 634 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 693
E G+R + +A + L E + EE LI+ G
Sbjct: 472 AEMNRQGIRVIAVATKTLKVGE------------ADFTKTDEE-----------QLIIEG 508
Query: 694 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 725
D + E I L + GI + VLTGD
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.87 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.5 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.48 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.19 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.16 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.13 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.08 | |
| PLN02887 | 580 | hydrolase family protein | 99.04 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.99 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.99 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.97 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.92 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.91 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.89 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.86 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.85 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.82 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.8 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.78 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.62 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.59 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.57 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.57 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.5 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.49 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.46 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.43 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.4 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.38 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.35 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.33 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.31 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.3 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.28 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.27 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.26 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.24 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.17 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.05 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.02 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.99 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.88 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.87 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.82 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.81 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.77 | |
| PLN02423 | 245 | phosphomannomutase | 97.68 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.55 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.52 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.46 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.4 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.37 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.3 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.17 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.15 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.13 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.11 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.09 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.01 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.0 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.99 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.98 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.96 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.89 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.87 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.86 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.8 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.77 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.73 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.67 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.6 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.47 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.45 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.41 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.41 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.36 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.34 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.3 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.27 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.24 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.21 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.18 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.08 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.98 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.96 | |
| PLN02151 | 354 | trehalose-phosphatase | 95.94 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.76 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.74 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.67 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.55 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.47 | |
| PLN02940 | 382 | riboflavin kinase | 95.47 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.44 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.06 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.03 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.02 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.01 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.94 | |
| PLN02811 | 220 | hydrolase | 94.94 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.84 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.77 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.6 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.59 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.18 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.15 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.82 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.58 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 93.46 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.35 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.18 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 92.57 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.51 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 92.36 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 92.18 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.77 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 91.43 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 91.06 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.73 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.62 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 90.13 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 89.76 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 89.68 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 89.59 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 88.9 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 88.42 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.76 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 86.68 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 85.66 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 85.64 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 84.67 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 84.39 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 82.32 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 80.94 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 80.56 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 80.49 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 80.31 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-160 Score=1420.60 Aligned_cols=859 Identities=64% Similarity=1.005 Sum_probs=771.9
Q ss_pred CCCeeEEEeCCCcchhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhH
Q 002398 34 PGFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVV 113 (928)
Q Consensus 34 ~~~~r~~~~n~~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~v 113 (928)
++.+|+++.|++..++.+...|+.|+|+|+||++++|||++||+||+|++|+|||++++|+++|++|++++++++||+++
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 35589999999966555667899999999999999999999999999999999999999999998899999999999999
Q ss_pred hhhhhhHHHHHHHHHHhhhHHHhcceEEEEeCC-CeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEec
Q 002398 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGE-GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETT 192 (928)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~v~~r~-g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes 192 (928)
+.++++||++||++|+++|+++|+++++|+ ++ +.++...|++|+|||+|++..+|.+|||++||++++++|.|||+|+
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~-~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~ 169 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVL-RGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETA 169 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEe-cCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEe
Confidence 999999999999999999999999999999 64 4499999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEE
Q 002398 193 NLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAV 272 (928)
Q Consensus 193 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~V 272 (928)
+|||||++|.|++...+......+.+..+++.|+||.||+++|.|.|++..+++..|++++|+++|||.++||.|++|+|
T Consensus 170 nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~v 249 (1151)
T KOG0206|consen 170 NLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVV 249 (1151)
T ss_pred ecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEE
Confidence 99999999999998888775556668899999999999999999999999888777999999999999999999999999
Q ss_pred EEecCCcceeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcch
Q 002398 273 IFTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (928)
Q Consensus 273 v~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
++||++||+|+|+..++.|++.+++.+|..+..++++++++|++++++..+|...+..+.. ..||+....
T Consensus 250 v~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~--------- 319 (1151)
T KOG0206|consen 250 VFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE--------- 319 (1151)
T ss_pred EEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------
Confidence 9999999999999999999999999999999999999999999999999998874432211 356664321
Q ss_pred hHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCccc
Q 002398 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
.....+..|+++++++..++|+||++++++++.+|++++++|.+||+++.+.++.+|+++++|+||||++|++|||||||
T Consensus 320 ~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT 399 (1151)
T KOG0206|consen 320 AAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLT 399 (1151)
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccc
Confidence 33456779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHH
Q 002398 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (928)
Q Consensus 433 ~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 512 (928)
+|.|+|++|+++|..|+...++......++.... ...+..+++.|.|+.+.++.+...++...+++|++++
T Consensus 400 ~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~---------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~l 470 (1151)
T KOG0206|consen 400 QNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD---------VNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRAL 470 (1151)
T ss_pred cceeeeecccccCcccccCCChhhcccCcccccc---------ccccccccceeccchhhccccccccCcchHHHHhhHH
Confidence 9999999999999999987665433322211100 0113356788999999998888888889999999999
Q ss_pred hhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceE
Q 002398 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (928)
Q Consensus 513 ~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (928)
++||++.++.+++.+.+.|++.||||.||+++|+.+|+.+..|+++.+.+...+ ....|++|+++||+|.||||
T Consensus 471 a~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g------~~~~y~lL~iLeF~S~RKRM 544 (1151)
T KOG0206|consen 471 ALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG------VEETYELLNVLEFNSTRKRM 544 (1151)
T ss_pred hccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc------cceeEEEEEEecccccccee
Confidence 999999999876666899999999999999999999999999999999998554 35899999999999999999
Q ss_pred EEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhccc
Q 002398 593 SVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSA 672 (928)
Q Consensus 593 sviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~ 672 (928)
|||||+|+|++++||||||++|++++...+....+.+.+|+++|+.+||||||+|||+++++||.+|+++|.+|.+++ .
T Consensus 545 SVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~-~ 623 (1151)
T KOG0206|consen 545 SVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL-T 623 (1151)
T ss_pred EEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999888889999999999999999999999999999999999999999999999 6
Q ss_pred CHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCC
Q 002398 673 DREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 752 (928)
Q Consensus 673 ~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~ 752 (928)
||+++++++++.+|+||+++|+|+|||+||+|||++|+.|++||||+||||||+.|||++||.+|+++.+++.++.++..
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEe
Q 002398 753 TPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR 832 (928)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r 832 (928)
+.+...... ... ...+................... ..++++|||+++.++++++.+.+|..++..|++|+|||
T Consensus 704 ~~~~~~~~~-----~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR 776 (1151)
T KOG0206|consen 704 TSEELSSLD-----ATA-ALKETLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCR 776 (1151)
T ss_pred Chhhhcchh-----hHH-HHHHHHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEcc
Confidence 644111111 011 11112222111111111111111 37899999999999999988899999999999999999
Q ss_pred cCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccccchhhhcchhhhHHHh
Q 002398 833 SSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRI 912 (928)
Q Consensus 833 ~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l~~lll~~gr~~~~~i 912 (928)
++|.||+.+|+++++..+..|+|||||+||++|||+||||||++|.||+||.++|||+|.+|++|.+||++||||+|.|+
T Consensus 777 ~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~ 856 (1151)
T KOG0206|consen 777 VSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRL 856 (1151)
T ss_pred CCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHH
Confidence 99999999999998778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhheeeeeccccc
Q 002398 913 SSMVCFTLKMLIDK 926 (928)
Q Consensus 913 ~~~i~~~~~~n~~~ 926 (928)
+++++|+||||+..
T Consensus 857 a~~ilyfFYKNi~f 870 (1151)
T KOG0206|consen 857 AKMILYFFYKNIAF 870 (1151)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-150 Score=1381.43 Aligned_cols=862 Identities=39% Similarity=0.631 Sum_probs=723.1
Q ss_pred CCeeEEEeCCCcchhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc-CCCCCCcccchhhhhH
Q 002398 35 GFSRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVV 113 (928)
Q Consensus 35 ~~~r~~~~n~~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~v 113 (928)
...|.+++|++... +...+|++|.|.|+||++|+|||++||+||+|++|+|||+++++|++| +++.+++++++||+++
T Consensus 68 ~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~v 146 (1178)
T PLN03190 68 EDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFV 146 (1178)
T ss_pred CCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHH
Confidence 45799999987422 224469999999999999999999999999999999999999999999 8999999999999999
Q ss_pred hhhhhhHHHHHHHHHHhhhHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecC
Q 002398 114 IGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTN 193 (928)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~ 193 (928)
++++++++++||++|+++|+++|++.++|+ ++|.+++++|++|+|||||+|++||.+|||++||++++++|.|+|||++
T Consensus 147 l~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~ 225 (1178)
T PLN03190 147 LLVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTIN 225 (1178)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccc
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEE
Q 002398 194 LDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVI 273 (928)
Q Consensus 194 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv 273 (928)
|||||+||.|.+++.+... ......++|.|+||.||+++|.|.|++.+++...+++.+|+++|||.|+||+|++|+|+
T Consensus 226 LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 226 LDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred cCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEE
Confidence 9999999999988765421 12235678999999999999999999999999999999999999999999999999999
Q ss_pred EecCCcceeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCC-------C
Q 002398 274 FTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTT-------A 346 (928)
Q Consensus 274 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~-------~ 346 (928)
|||+|||+++|...++.|+|++|+.+|+++.+++++++++|++++++..+|.....++ .||+...... .
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~----~~yl~~~~~~~~~~~~~~ 379 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDE----LDTIPFYRRKDFSEGGPK 379 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccc----cccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999998887775422221 3443221100 0
Q ss_pred ccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEec
Q 002398 347 YYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSD 426 (928)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~D 426 (928)
.++........+..|+++++++..+||+||++++++++.+|+++|++|.+||++..+.++.+|+++++|+||+|+|||+|
T Consensus 380 ~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSD 459 (1178)
T PLN03190 380 NYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSD 459 (1178)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEc
Confidence 00001111234567888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCC--CCCCChHH
Q 002398 427 KTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSW--VNEPHADV 504 (928)
Q Consensus 427 KTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 504 (928)
||||||+|+|+|++|+++|..|+.+....+.... ......+ ......+...+.++.+..... ...+....
T Consensus 460 KTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (1178)
T PLN03190 460 KTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYSVEVD-------GKILRPKMKVKVDPQLLELSKSGKDTEEAKH 531 (1178)
T ss_pred CCCccccceEEEEEEEECCEEcccccccchhhhh-ccccccc-------cccccccccccCCHHHHhhhhccccchhhHH
Confidence 9999999999999999999999753221110000 0000000 000000000112222222111 11122345
Q ss_pred HHHHHHHHhhcceeeccccCC--C---CceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEE
Q 002398 505 IQKFLRLLAICHTALPEVDEE--N---GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSL 579 (928)
Q Consensus 505 ~~~~~~~l~lc~~~~~~~~~~--~---~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i 579 (928)
+.+|+.++++||++.+...++ . +.+.|+++||||.||+++|+.+|+.+.+|+++.+.+...+. ...|++
T Consensus 532 i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~------~~~~~i 605 (1178)
T PLN03190 532 VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE------RQRFNV 605 (1178)
T ss_pred HHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc------eeccee
Confidence 788999999999998853211 1 24789999999999999999999999999999998887655 478999
Q ss_pred eeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhc-chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHH
Q 002398 580 LNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN-GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658 (928)
Q Consensus 580 l~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~ 658 (928)
++++||+|+|||||||++++++++++|+||||+.|+++|+.. +...++.+.+++++|+++|+||||+|||+++++|+.+
T Consensus 606 l~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~ 685 (1178)
T PLN03190 606 LGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQ 685 (1178)
T ss_pred EEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhh
Confidence 999999999999999999998999999999999999999754 3356778899999999999999999999999999999
Q ss_pred HHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC
Q 002398 659 FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 738 (928)
Q Consensus 659 ~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~g 738 (928)
|.++|.+|+.++ .+|++.++++.+.+|+||+++|+++++|++|++++++|+.|++|||++||+|||+.+||++||++||
T Consensus 686 ~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~ 764 (1178)
T PLN03190 686 WHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSK 764 (1178)
T ss_pred HHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhC
Confidence 999999999998 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH-Hhhhh-hhhcccCCCCCCCeEEEEechhhHHHhHHHHHH
Q 002398 739 LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH-QLIRG-KELLDSSNESLGPLALIIDGKSLTYALEDDVKD 816 (928)
Q Consensus 739 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~ 816 (928)
|+++++..+.++....+. ....+.......... ..... ............+.+++++|.++..++++++.+
T Consensus 765 Ll~~~~~~i~i~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~ 837 (1178)
T PLN03190 765 LLTNKMTQIIINSNSKES-------CRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEE 837 (1178)
T ss_pred CCCCCCeeEEecCCchhh-------HHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHH
Confidence 999998888776653211 111111111000000 00000 000001112345678999999999999888889
Q ss_pred HHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc
Q 002398 817 LFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 817 ~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
.|.+++..|++|||||++|.||+++|+.+|+..+++|+|||||+||++||++||||||++|+||.||+++|||+|.+|++
T Consensus 838 ~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~ 917 (1178)
T PLN03190 838 QLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRF 917 (1178)
T ss_pred HHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHH
Confidence 99999999999999999999999999999985568999999999999999999999999999999999999999999999
Q ss_pred cchhhhcchhhhHHHhhhhheeeeeccccc
Q 002398 897 LERLLLVHGHWCYRRISSMVCFTLKMLIDK 926 (928)
Q Consensus 897 l~~lll~~gr~~~~~i~~~i~~~~~~n~~~ 926 (928)
|.+||++||||+|+|++++++|+||||++.
T Consensus 918 L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~ 947 (1178)
T PLN03190 918 LVPLLLVHGHWNYQRMGYMILYNFYRNAVF 947 (1178)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999874
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-141 Score=1320.97 Aligned_cols=838 Identities=54% Similarity=0.867 Sum_probs=716.7
Q ss_pred CCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc-CCCCCCcccchhhhhHhhhhhhHHHHHHHHHHhhhH
Q 002398 55 YSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDI 133 (928)
Q Consensus 55 ~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~ 133 (928)
|++|.|.|+||++|+|||++||+||++++|+|||++++++++| +++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 889999999999999999999999999999999999
Q ss_pred HHhcceEEEEeCC-CeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecccccccCC
Q 002398 134 EVNNRKVKVHCGE-GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNM 212 (928)
Q Consensus 134 ~~n~~~~~v~~r~-g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~ 212 (928)
++|++.++|+ |+ |++++++|++|+|||||+|++||.||||++||++++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 86 899999999999999999999999999999999999999999999999999999999987766544
Q ss_pred CCccccccCcEEEEEecCCCCcceEEEEEEEcC-eeecCCCCcccccCceeecCCeEEEEEEEecCCcceeeccCCCCCc
Q 002398 213 HEDSNFQNFKAIIRCEDPNANLYTFVGSLELEE-QQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSK 291 (928)
Q Consensus 213 ~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g-~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~~~~~~~~k 291 (928)
.....+..++|.|+||.||++++.|.|++.+++ ...|++.+|+++|||.++||||++|+|+|||++||++++...++.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 445566778999999999999999999999988 7789999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhc
Q 002398 292 RSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYL 371 (928)
Q Consensus 292 ~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 371 (928)
+|++++.+|+++.+++.+++++|++++++..+|...... ..||+..+.. ........+..|++++++++.+
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999998887666532221 2688753221 1122234566888999999999
Q ss_pred cccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCC
Q 002398 372 IPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 451 (928)
Q Consensus 372 iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~ 451 (928)
+|++|++++++++.++++++++|.+|++++.++++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+..
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999999999999988778899999999999999999999999999999999999999999999865
Q ss_pred ccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeeccc-cCCCCceE
Q 002398 452 VTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKIS 530 (928)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~-~~~~~~~~ 530 (928)
.........+..+...+... ......+...|.++.+.+......+..+.+.+|+.++++||++.+.. ++..+.+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~ 466 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENEN----SMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEIT 466 (1057)
T ss_pred cchHHHHhhhcccccccccc----cccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceE
Confidence 43322221111110000000 00001112345555554433223334456789999999999998875 22234588
Q ss_pred EEecCccHHHHHHHHHHCCcEEEEecCCeeE--EEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEe
Q 002398 531 YEAESPDEAAFVIAARELGFEFYERTQTSIS--VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSK 608 (928)
Q Consensus 531 y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~K 608 (928)
|+++||+|.||+++|+.+|+.+.+|+++.+. +...+. ...|++++++||+|+|||||||++++++++++|+|
T Consensus 467 y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~K 540 (1057)
T TIGR01652 467 YQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCK 540 (1057)
T ss_pred EEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEe
Confidence 9999999999999999999999999887443 333332 47899999999999999999999999999999999
Q ss_pred cCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhcc
Q 002398 609 GADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN 688 (928)
Q Consensus 609 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~d 688 (928)
|||+.|+++|...++..++.+.+++++|+.+|+|||++|||+++++|+.+|.++|.+|+.++ .+|++.+++.++.+|+|
T Consensus 541 GA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~ 619 (1057)
T TIGR01652 541 GADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKD 619 (1057)
T ss_pred CcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhc
Confidence 99999999998654566788899999999999999999999999999999999999999988 79999999999999999
Q ss_pred ceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHH
Q 002398 689 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 768 (928)
Q Consensus 689 l~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (928)
|+|+|++++|||||++|+++|+.|++|||++||+|||+.+||++||++|||+.++...+.+++...+.... ....+
T Consensus 620 L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~----~~~~i 695 (1057)
T TIGR01652 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRS----VEAAI 695 (1057)
T ss_pred CEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHH----HHHHH
Confidence 99999999999999999999999999999999999999999999999999999888888777654221100 00111
Q ss_pred HHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc
Q 002398 769 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 848 (928)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~ 848 (928)
.+.... ...... ......+++++++|++++.+++++..++|.+++..|+++||||++|+||+++|+.+|+.
T Consensus 696 ~~~~~~--------~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~ 766 (1057)
T TIGR01652 696 KFGLEG--------TSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKS 766 (1057)
T ss_pred HHHHHH--------HHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhc
Confidence 111100 000000 01124567899999999999988888899999999999999999999999999999984
Q ss_pred CCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccccchhhhcchhhhHHHhhhhheeeeeccccc
Q 002398 849 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMVCFTLKMLIDK 926 (928)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l~~lll~~gr~~~~~i~~~i~~~~~~n~~~ 926 (928)
.|++|+|+|||+||++||++||||||++|+|+.||+.+|||+|.+|++|.+||++|||++|+|+++++.|.||||++.
T Consensus 767 ~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~ 844 (1057)
T TIGR01652 767 TGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIF 844 (1057)
T ss_pred CCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999988999999999999999999999864
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-131 Score=1068.37 Aligned_cols=787 Identities=36% Similarity=0.568 Sum_probs=689.6
Q ss_pred eeEEEeCCCcchhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc-CCCCCCcccchhhhhHhh
Q 002398 37 SRVVHCNDPESFEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPYSAVSNVLPLVVVIG 115 (928)
Q Consensus 37 ~r~~~~n~~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~ 115 (928)
.|.+.+.... ..++.+|++|.++..||++++|+|..|++||+.+.|+|||+.++.|++| +......+++.|+.|+++
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 3555554432 2346789999999999999999999999999999999999999999999 444446788999999999
Q ss_pred hhhhHHHHHHHHHHhhhHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCC
Q 002398 116 ATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (928)
Q Consensus 116 ~~~i~~~~~d~~r~k~~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~Lt 195 (928)
+++++|+++|++|++.|++.|+..++++.|+|.... ++++|+|||+|.+.+|++||||+++|.+++..|.|+|.|..||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999988876554 9999999999999999999999999999999999999999999
Q ss_pred CCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCe--eecCCCCcccccCceeecCCeEEEEEE
Q 002398 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQ--QYPLTPQQLLLRDSKLRNTDCIYGAVI 273 (928)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~--~~~l~~~n~l~rGs~l~~t~~~~g~Vv 273 (928)
|||++|.|-|.+.++++.....+..++ |..|.|+.++|.|-|++.+... ..+|+.+|.+|.++.+.. |.++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEE
Confidence 999999999999999888887777766 8999999999999999999543 478999999999999996 66999999
Q ss_pred EecCCcceeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchh
Q 002398 274 FTGRDTKVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRA 353 (928)
Q Consensus 274 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
|||.||+-++|...++.|-..++..+|-+..+++.++++++++....-++- ..||+
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~----------~~wyi-------------- 352 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG----------SDWYI-------------- 352 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----------CchHH--------------
Confidence 999999999999999999999999999999999988888877765443321 27886
Q ss_pred HHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccc
Q 002398 354 AVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
.+++++++++.+||++|.+.+++++...++.+..|.+ -.+..+|++++.|+||+|+|+++|||||||+
T Consensus 353 ------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~------IpgtvvRSstIPEeLGRIsylLtDKTGTLTq 420 (1051)
T KOG0210|consen 353 ------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKN------IPGTVVRSSTIPEELGRISYLLTDKTGTLTQ 420 (1051)
T ss_pred ------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCC------CCceeeecCCChHHhcceEEEEecCcCcccc
Confidence 7999999999999999999999999999999988874 3678999999999999999999999999999
Q ss_pred cceEEEEEEEcCeecCCCcc-HHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHH
Q 002398 434 NSMEFIKCSIAGTSYGRGVT-EVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (928)
Q Consensus 434 n~m~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 512 (928)
|+|.+++++.+-..|+.+.. +.+.....-.+.+-+ ..+. .......+.....++..+++
T Consensus 421 NEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~-----------~~~~---------~~~~~k~~~s~rv~~~V~al 480 (1051)
T KOG0210|consen 421 NEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRN-----------KGKG---------ALSRVKKDMSARVRNAVLAL 480 (1051)
T ss_pred chheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcc-----------cccc---------cchhhcCcccHHHHHHHHHH
Confidence 99999999999988875432 222222222111000 0000 00112234456778999999
Q ss_pred hhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceE
Q 002398 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (928)
Q Consensus 513 ~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (928)
++||++.|..++ .|...|++.||||.||+++.+..|..+..|+.+.+.+...... ...|+||.+|||+|+.|||
T Consensus 481 alCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~-----~~~yqIL~vFPFtsEtKRM 554 (1051)
T KOG0210|consen 481 ALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDD-----ELNYQILQVFPFTSETKRM 554 (1051)
T ss_pred HHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCc-----ceeEEEEEEecccccccee
Confidence 999999998764 4689999999999999999999999999999999998877543 6899999999999999999
Q ss_pred EEEEEeC-CCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcc
Q 002398 593 SVIVRSE-EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVS 671 (928)
Q Consensus 593 sviv~~~-~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~ 671 (928)
.+|||++ .+++.+|.||||.+|......+ +++++....++++|+|||++|+|.++++||+.+.+.|+.|+.++
T Consensus 555 GIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi- 628 (1051)
T KOG0210|consen 555 GIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSI- 628 (1051)
T ss_pred eEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCcc-
Confidence 9999997 6999999999999998776543 57788889999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHH-HHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEe
Q 002398 672 ADREELAEEIAE-KIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 750 (928)
Q Consensus 672 ~~r~~~~~~~~~-~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~ 750 (928)
.||++++..+.+ .+|+||+++|++|+||+||++|+.+++.||+||||+||+|||+.+||+.||++.+|+..++.+..+.
T Consensus 629 ~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~ 708 (1051)
T KOG0210|consen 629 SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIR 708 (1051)
T ss_pred chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEE
Confidence 899999999887 9999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred CCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEE
Q 002398 751 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 830 (928)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~ 830 (928)
.-..... ....++. + ......+++|+|++++..++ .+++.|.++.+.|.++||
T Consensus 709 ~v~sr~d------ah~eL~~----------------l----R~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~ 761 (1051)
T KOG0210|consen 709 SVTSRGD------AHNELNN----------------L----RRKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVC 761 (1051)
T ss_pred ecCCchH------HHHHHHH----------------h----hcCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEE
Confidence 6542211 1111111 0 24567899999999998775 688899999999999999
Q ss_pred EecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccccchhhhcchhhhHH
Q 002398 831 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYR 910 (928)
Q Consensus 831 ~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l~~lll~~gr~~~~ 910 (928)
||++|.||+++++++|++.++.|++||||.||++||++||+|||+-|+||.||..+|||.|.+|.++.+||++|||++|+
T Consensus 762 CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYk 841 (1051)
T KOG0210|consen 762 CRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYK 841 (1051)
T ss_pred EecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHH
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhheeeeeccc
Q 002398 911 RISSMVCFTLKMLI 924 (928)
Q Consensus 911 ~i~~~i~~~~~~n~ 924 (928)
|.+++-+|.+.+.+
T Consensus 842 rsa~laqfViHRGL 855 (1051)
T KOG0210|consen 842 RSAKLAQFVIHRGL 855 (1051)
T ss_pred HHHHHHHHHHhhhH
Confidence 99999888776654
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-103 Score=956.63 Aligned_cols=649 Identities=30% Similarity=0.447 Sum_probs=539.3
Q ss_pred hhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc--CCCCCCcccchhhhhHhhhhhhHHHHHHH
Q 002398 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LSPYSAVSNVLPLVVVIGATMGKEVLEDW 126 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (928)
.+|++.||.|++...+...++ +.++.||.++++++++++++++++. +.+.. .....++++++++++..+++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHHH
Confidence 567888999999977764443 8899999999999999999999874 11111 3444556667777777788888
Q ss_pred HHHhh---hHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceee
Q 002398 127 RRKKQ---DIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLK 203 (928)
Q Consensus 127 ~r~k~---~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K 203 (928)
+..++ ++++.+..++|+ |||++++|+|++|+|||||+|++||.||||++||++++ .+||||+|||||.|+.|
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 88665 556668899999 99999999999999999999999999999999999996 59999999999999999
Q ss_pred cccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceee
Q 002398 204 QALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~ 283 (928)
.+..... .+.| ..++..|++|+||.+++ |.+.|+|++||.+|++++
T Consensus 201 ~~~~~~~----------------~~~~-----------------~~~d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G~ 246 (917)
T COG0474 201 QALPLTK----------------SDAP-----------------LGLDRDNMLFSGTTVVS-GRAKGIVVATGFETEFGK 246 (917)
T ss_pred ccccccc----------------cccc-----------------ccCCccceEEeCCEEEc-ceEEEEEEEEcCccHHHH
Confidence 9875542 0111 01467899999999998 779999999999998877
Q ss_pred ccCC---CCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHH
Q 002398 284 NSTG---PPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360 (928)
Q Consensus 284 ~~~~---~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
+... .....+++++.++++..+++.+.++++++.+++..+... . .|+ ..
T Consensus 247 ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-~-------~~~--------------------~~ 298 (917)
T COG0474 247 IARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-N-------GLL--------------------ES 298 (917)
T ss_pred HHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c-------cHH--------------------HH
Confidence 6653 225679999999999999999999998888877633211 1 132 37
Q ss_pred HHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEE
Q 002398 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
+.+++.+++.++|.+||+.++++..+++.+| +++++++|+++++|+||++++||||||||||+|+|+|.+
T Consensus 299 ~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~ 368 (917)
T COG0474 299 FLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK 368 (917)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEE
Confidence 9999999999999999999999999999999 888999999999999999999999999999999999999
Q ss_pred EEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeec
Q 002398 441 CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALP 520 (928)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~ 520 (928)
+++++. +.+... ..........+++.++++||++.+
T Consensus 369 ~~~~~~--~~~~~~------------------------------------------~~~~~~~~~~~~l~~~~lc~~~~~ 404 (917)
T COG0474 369 IYINGG--GKDIDD------------------------------------------KDLKDSPALLRFLLAAALCNSVTP 404 (917)
T ss_pred EEeCCC--cccccc------------------------------------------cccccchHHHHHHHHHHhcCcccc
Confidence 998851 000000 000122334478999999999988
Q ss_pred cccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCC
Q 002398 521 EVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE 600 (928)
Q Consensus 521 ~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~ 600 (928)
..+ + .+..+||+|.||++++.+.|+.+ . . ......+++++.+||+|+|||||||+++.+
T Consensus 405 ~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~--~-------------~~~~~~~~~~~~~PFdS~rKrMsviv~~~~ 463 (917)
T COG0474 405 EKN-G----WYQAGDPTEGALVEFAEKLGFSL-D--L-------------SGLEVEYPILAEIPFDSERKRMSVIVKTDE 463 (917)
T ss_pred ccc-C----ceecCCccHHHHHHHHHhcCCcC-C--H-------------HHHhhhcceeEEecCCCCceEEEEEEEcCC
Confidence 654 2 56689999999999999988744 1 0 011356688999999999999999999877
Q ss_pred CeEEEEEecCcHHHHHHHhh------cchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCH
Q 002398 601 GTLLLLSKGADSVMFERLAE------NGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADR 674 (928)
Q Consensus 601 g~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r 674 (928)
+++++|+|||||+|+++|+. ..++.++.+.+..++|+++|||+|++|||.++.++..
T Consensus 464 ~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~----------------- 526 (917)
T COG0474 464 GKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD----------------- 526 (917)
T ss_pred CcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc-----------------
Confidence 88999999999999999985 2345678889999999999999999999977654321
Q ss_pred HHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCC
Q 002398 675 EELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP 754 (928)
Q Consensus 675 ~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~ 754 (928)
... +.+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+.+||++||++||+..+..
T Consensus 527 ----~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~---------- 591 (917)
T COG0474 527 ----DEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE---------- 591 (917)
T ss_pred ----chh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC----------
Confidence 011 67899999999999999999999999999999999999999999999999999999864321
Q ss_pred ccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecC
Q 002398 755 ESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS 834 (928)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~s 834 (928)
. .++++|++++...++++.+.+.. +. ||||++
T Consensus 592 -----------------------------------------~-~~vi~G~el~~l~~~el~~~~~~----~~--VfARvs 623 (917)
T COG0474 592 -----------------------------------------S-ALVIDGAELDALSDEELAELVEE----LS--VFARVS 623 (917)
T ss_pred -----------------------------------------c-eeEeehHHhhhcCHHHHHHHhhh----Cc--EEEEcC
Confidence 0 56899999998888766555553 33 999999
Q ss_pred cccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHh
Q 002398 835 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRI 912 (928)
Q Consensus 835 p~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i 912 (928)
|+||.++|+.+|+ .|++|+|+|||+||+||||+|||||||.+...+.|+++||+++.++++ +..+ +.|||++|.|+
T Consensus 624 P~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~a-v~eGR~~~~ni 701 (917)
T COG0474 624 PEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLA-VVEGRRVYVNI 701 (917)
T ss_pred HHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHH-HHHhHHHHHHH
Confidence 9999999999999 799999999999999999999999999765556699999999999777 5444 99999999999
Q ss_pred hhhheeeeeccccc
Q 002398 913 SSMVCFTLKMLIDK 926 (928)
Q Consensus 913 ~~~i~~~~~~n~~~ 926 (928)
++++.|.+++|+.+
T Consensus 702 ~k~i~~~l~~n~~~ 715 (917)
T COG0474 702 KKFILYLLSKNVGE 715 (917)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-98 Score=833.32 Aligned_cols=702 Identities=22% Similarity=0.283 Sum_probs=544.8
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (928)
..+|++.||.|+++...-..++ +.+++||.+++..++|++++++|+. .+|...+.+.+++++.++..++++|+
T Consensus 29 v~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 29 VTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeeehh
Confidence 4567889999999988766554 9999999999999999999999984 45556666667777777888999999
Q ss_pred HHhhhHHHh---cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeec
Q 002398 128 RKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (928)
Q Consensus 128 r~k~~~~~n---~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~ 204 (928)
..|+...++ +..++|+ |+|+.+.+++++|||||||.|+-||+||||++|++..+ ..||||+|||||.|+.|.
T Consensus 102 aEkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hHHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 999866555 7899999 99999999999999999999999999999999999987 899999999999999997
Q ss_pred ccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCccee--
Q 002398 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF-- 282 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~-- 282 (928)
....... | ....-+.+|++|.|+.+.+ |.+.|+|+.||.+|.++
T Consensus 177 t~~v~~~------------------~---------------~~~~~dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I 222 (972)
T KOG0202|consen 177 TDAVPKD------------------E---------------NADVQDKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKI 222 (972)
T ss_pred CccccCC------------------C---------------CCccccceeeEeecceeec-CceeEEEEeccccchHHHH
Confidence 6543310 0 0111245677777777775 77999999999999653
Q ss_pred -eccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHH
Q 002398 283 -QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF-FGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360 (928)
Q Consensus 283 -~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
......+..++|+|++++.+...+.-++.++|+..+++ .+++.. . . +..+|+- .....
T Consensus 223 ~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~-p-~--~~g~~fk----------------~~~~~ 282 (972)
T KOG0202|consen 223 FKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLD-P-V--HGGSWFK----------------GALYY 282 (972)
T ss_pred HHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcc-c-c--ccccchh----------------chhhh
Confidence 33344566689999999999999986666777666665 222220 0 0 0124542 23457
Q ss_pred HHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEE
Q 002398 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
|..++.+.+.+||.|||+.++...+++..+| +++++++|.+..+|.||.+++||+|||||||+|+|.+.+
T Consensus 283 f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~ 352 (972)
T KOG0202|consen 283 FKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSK 352 (972)
T ss_pred hhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEE
Confidence 8889999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred EEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeec
Q 002398 441 CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALP 520 (928)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~ 520 (928)
+++.+..+... .+ ... ++ ...+..+-.+.+..- ........+.+++++.+.++||.+..
T Consensus 353 i~~~~~~~~~~-~~--f~~---tg------------~ty~~~g~v~~~~~~---~~~~~~~~~~l~~l~~i~~lCNda~v 411 (972)
T KOG0202|consen 353 IFIPDGGTATV-DE--FNP---TG------------TTYSPEGEVFKDGLY---EKDKAGDNDLLQELAEICALCNDATV 411 (972)
T ss_pred EEecccccccc-cc--ccc---CC------------ceeCCCCceEecCcc---ccccccccHHHHHHHHHHHhhhhhhh
Confidence 99877654332 00 000 00 000000101111000 00112345678899999999998877
Q ss_pred cccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCC
Q 002398 521 EVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE 600 (928)
Q Consensus 521 ~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~ 600 (928)
..++. +.++. .+.|.|.||..+++++|+.-...... .-.+ +....+.....++...++||+|+||+|||.+.++.
T Consensus 412 ~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~--s~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~ 486 (972)
T KOG0202|consen 412 EYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNL--SNEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAH 486 (972)
T ss_pred hcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhcc--cccc-cccchhHHHHhhhheeEeecccccceEEEEEecCC
Confidence 66553 22222 47999999999999998864331000 0000 11122223456677899999999999999999876
Q ss_pred Ce--EEEEEecCcHHHHHHHhhc-----------chhhHHHHHHHHHHHHhccCeEEEEEEEecCH-H--HHHHHHHHHH
Q 002398 601 GT--LLLLSKGADSVMFERLAEN-----------GREFEEQTKEHINEYADAGLRTLILAYRELDE-K--EYKQFNEEFT 664 (928)
Q Consensus 601 g~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~-~--e~~~~~~~~~ 664 (928)
+. ..+|+|||+|.|+++|+.. .+..++.+.+...+|+++|||+|++|+++.+. . +-..|
T Consensus 487 ~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~----- 561 (972)
T KOG0202|consen 487 GQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLN----- 561 (972)
T ss_pred CCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhc-----
Confidence 64 8999999999999999542 24567888999999999999999999997764 1 10000
Q ss_pred HHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCc
Q 002398 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (928)
Q Consensus 665 ~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (928)
...-+...|.||+|+|++|+.||+|++++++|+.|++|||+|.|+|||+.+||.+||+++||...+.
T Consensus 562 -------------~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~e 628 (972)
T KOG0202|consen 562 -------------DTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDE 628 (972)
T ss_pred -------------ccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCc
Confidence 0112457789999999999999999999999999999999999999999999999999999876543
Q ss_pred eEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhc
Q 002398 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (928)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~ 824 (928)
.+ ....++|++++.+.++++.....
T Consensus 629 d~--------------------------------------------------~~~~~TG~efD~ls~~~~~~~~~----- 653 (972)
T KOG0202|consen 629 DV--------------------------------------------------SSMALTGSEFDDLSDEELDDAVR----- 653 (972)
T ss_pred cc--------------------------------------------------cccccchhhhhcCCHHHHHHHhh-----
Confidence 20 11256787777666655554333
Q ss_pred CCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhh
Q 002398 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLL 902 (928)
Q Consensus 825 ~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll 902 (928)
++.+|+|++|++|.++|+.||+ .|+.|+|.|||.||+|+|+.|||||||+-+..+.||++||+|+.|++| ++.. +
T Consensus 654 -~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaA-V 730 (972)
T KOG0202|consen 654 -RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAA-V 730 (972)
T ss_pred -cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHH-H
Confidence 4569999999999999999998 899999999999999999999999999534444499999999999777 8888 9
Q ss_pred cchhhhHHHhhhhheeeeecccccc
Q 002398 903 VHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 903 ~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
.+||.+|.||+++|.|.+..|+.++
T Consensus 731 EEGr~IynNik~Fir~~lSsnVgev 755 (972)
T KOG0202|consen 731 EEGRAIYNNIKNFIRYLLSSNVGEV 755 (972)
T ss_pred HHhHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999998765
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-96 Score=905.82 Aligned_cols=716 Identities=20% Similarity=0.231 Sum_probs=530.5
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (928)
.++|+++||+|+++.++...++ +.+++||..+++++++++++++++ .+.|...+.++++++++++..++++++
T Consensus 32 a~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~----~~~~~~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 32 AQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFA----MHDWIEGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHH----HhhHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4678899999999998765443 899999999999999999999998 355667777888889999999999999
Q ss_pred HHhhhHHHh---cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeec
Q 002398 128 RKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (928)
Q Consensus 128 r~k~~~~~n---~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~ 204 (928)
.+++.+.+. +.+++|+ |||++++|++++|||||||.|++||.||||++|+++++ +.||||+|||||.|+.|.
T Consensus 105 aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~ 179 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKD 179 (1053)
T ss_pred HHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceecc
Confidence 999866554 6789999 99999999999999999999999999999999999976 999999999999999998
Q ss_pred ccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceeec
Q 002398 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN 284 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~~ 284 (928)
+....... ......+..|++|+||.+.+ |.+.|+|++||.+|.+++.
T Consensus 180 ~~~~~~~~--------------------------------~~~~~~d~~n~lf~GT~V~~-G~g~~vVvatG~~T~~GkI 226 (1053)
T TIGR01523 180 AHATFGKE--------------------------------EDTPIGDRINLAFSSSAVTK-GRAKGICIATALNSEIGAI 226 (1053)
T ss_pred cccccccc--------------------------------ccCCcccCCCccccCceEEe-eeEEEEEEEecCccHHHHH
Confidence 64311000 00011245677777777775 7799999999999965433
Q ss_pred cC---CCC-----------------------------------CcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 002398 285 ST---GPP-----------------------------------SKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATR 326 (928)
Q Consensus 285 ~~---~~~-----------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 326 (928)
.. ... ..+||+++++++++.+++.+.++++++.+++..+ .
T Consensus 227 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-~- 304 (1053)
T TIGR01523 227 AAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-D- 304 (1053)
T ss_pred HHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h-
Confidence 22 110 0148999999999998888888777766553221 0
Q ss_pred ccccCcccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCc
Q 002398 327 EDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPA 406 (928)
Q Consensus 327 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i 406 (928)
.| ...+..++.+++.++|.+||+.++++.++++.+| +++++
T Consensus 305 ---------~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~ 345 (1053)
T TIGR01523 305 ---------VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNV 345 (1053)
T ss_pred ---------hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCC
Confidence 00 1245667899999999999999999999999999 88999
Q ss_pred cccccchhhhccceeEEEecCCCcccccceEEEEEEEcCe-ecCCCc--cHHHHHHHHhcCCCCcccchhhhccccccCC
Q 002398 407 RARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT-SYGRGV--TEVERAMARRKGSPLEEEVTEEQEDKASIKG 483 (928)
Q Consensus 407 ~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (928)
++|+++++|+||.+++||+|||||||+|+|.+.++++++. .|.... .............+.. .+ ... ..
T Consensus 346 lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~----~~~--~~ 417 (1053)
T TIGR01523 346 IVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRF--SP----YEY--SH 417 (1053)
T ss_pred EeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccc--cc----ccc--cc
Confidence 9999999999999999999999999999999999988652 221000 0000000000000000 00 000 00
Q ss_pred CccCchhhhcC-----CCCC---CCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEe
Q 002398 484 FNFEDERIMNG-----SWVN---EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYER 555 (928)
Q Consensus 484 ~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~ 555 (928)
....+..+... .... ....+...+++.++++||.+....++..+... ..++|+|.||+.+|...|+.....
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~~~~~~ 496 (1053)
T TIGR01523 418 NEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDLPHNAL 496 (1053)
T ss_pred cccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCCCcccc
Confidence 00000000000 0000 00123466789999999987764332222222 257999999999999998743110
Q ss_pred c-CCe---------eEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCC-eEEEEEecCcHHHHHHHhhc---
Q 002398 556 T-QTS---------ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLAEN--- 621 (928)
Q Consensus 556 ~-~~~---------~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g-~~~l~~KGa~~~i~~~~~~~--- 621 (928)
. ... ..+.... .++....|++++.+||+|+|||||++++++++ ++++|+|||||.|+++|+..
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~ 573 (1053)
T TIGR01523 497 TGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGK 573 (1053)
T ss_pred cchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcC
Confidence 0 000 0000000 01113568899999999999999999998654 58999999999999999742
Q ss_pred --------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEee
Q 002398 622 --------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 693 (928)
Q Consensus 622 --------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG 693 (928)
++..++.+.+.+++|+++|+|||++|||.++.+++..+ .+.. .. .+ .+.+|+||+|+|
T Consensus 574 ~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~--------~~~~e~~L~~~G 639 (1053)
T TIGR01523 574 DGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LN--------RATAESDLEFLG 639 (1053)
T ss_pred CCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cc--------hhhhccCCEEEE
Confidence 22346778888999999999999999999987654222 1100 00 01 245789999999
Q ss_pred eeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHH
Q 002398 694 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 773 (928)
Q Consensus 694 ~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (928)
+++++||+|++++++|+.|+++||++||+|||+..||.++|++|||+..+.. . ...
T Consensus 640 ~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~-~~~--------------------- 695 (1053)
T TIGR01523 640 LIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--H-DRD--------------------- 695 (1053)
T ss_pred EEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--c-ccc---------------------
Confidence 9999999999999999999999999999999999999999999999864311 0 000
Q ss_pred HhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeE
Q 002398 774 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTT 853 (928)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~v 853 (928)
......+++|.+++.+.++++.+... ...||||++|+||.++|+.+|+ .|++|
T Consensus 696 --------------------~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~lq~-~g~~V 748 (1053)
T TIGR01523 696 --------------------EIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEALHR-RKAFC 748 (1053)
T ss_pred --------------------ccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHHHh-cCCee
Confidence 00113589999998776655544332 3459999999999999999998 79999
Q ss_pred EEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc--ccccchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 854 LAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 854 l~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~--f~~l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+|+|||.||++||++|||||||+.+..+.|+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+
T Consensus 749 am~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i 823 (1053)
T TIGR01523 749 AMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEA 823 (1053)
T ss_pred EEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999423333499999999998 5559998 89999999999999999999998754
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-96 Score=815.25 Aligned_cols=662 Identities=23% Similarity=0.315 Sum_probs=531.8
Q ss_pred hhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc-----CCCCCCcccchhh---hhHhhhhhhH
Q 002398 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-----LSPYSAVSNVLPL---VVVIGATMGK 120 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-----~~~~~~~~~~~~l---~~vl~~~~i~ 120 (928)
++|+..||+|.++..+...|+ .++||.|.+..-+++++++++++.. ..+.+|+....++ +.+++++++.
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 568889999999999976665 8899999999999999999999864 2234566655444 3455566666
Q ss_pred HHHHHHHHHhhhHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcc
Q 002398 121 EVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNL 200 (928)
Q Consensus 121 ~~~~d~~r~k~~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~ 200 (928)
++-++.|-++.+++..+.++.|+ |||+.++|+..||+||||+.|+.||.+||||++++|.+ +.||||++||||++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~ 277 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDH 277 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcc
Confidence 66666666666666668899999 99999999999999999999999999999999999987 99999999999999
Q ss_pred eeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcc
Q 002398 201 KLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTK 280 (928)
Q Consensus 201 ~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk 280 (928)
+.|.+.. +.+.++||.+++|. +.++|+.+|.+|.
T Consensus 278 v~k~~~~-------------------------dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt~ 311 (1034)
T KOG0204|consen 278 VQKSLDK-------------------------DPFLLSGTKVMEGS---------------------GKMLVTAVGMNTQ 311 (1034)
T ss_pred eeccCCC-------------------------CCeEeecceeecCc---------------------ceEEEEEeeecch
Confidence 9997643 33678888888877 8999999999995
Q ss_pred ---eeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccc--ccCcccccccccCCCCCCccCcchhHH
Q 002398 281 ---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATRED--LQDGKMKRWYLRPDDTTAYYDPKRAAV 355 (928)
Q Consensus 281 ---~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~--~~~~~~~~w~~~~~~~~~~~~~~~~~~ 355 (928)
+|.........++|+|-++++++..+..+.++++.+.+++........ ..+++. .| -.....+.
T Consensus 312 wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~----------~~~~~~~~ 380 (1034)
T KOG0204|consen 312 WGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GT----------TWSDEYIQ 380 (1034)
T ss_pred HhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Cc----------cccHHHHH
Confidence 455555666678999999999999998888888887777655433221 111000 01 11122344
Q ss_pred HHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccc
Q 002398 356 AAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (928)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (928)
.++..|..++.++++++|.+||+++++..+++..+| .+.+.++|.++++|.+|....||+|||||||.|.
T Consensus 381 ~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~ 450 (1034)
T KOG0204|consen 381 EFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTTNR 450 (1034)
T ss_pred HHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEeee
Confidence 566678888899999999999999999999999988 4556789999999999999999999999999999
Q ss_pred eEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhc
Q 002398 436 MEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 515 (928)
Q Consensus 436 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc 515 (928)
|++.+.++++..|..+... . ..-.+.....++.+++..
T Consensus 451 MtVV~~~~~~~~~k~~~~~-~-----------------------------------------~~l~~~~~~ll~~gI~~N 488 (1034)
T KOG0204|consen 451 MTVVQSYIGSEHYKVNSPK-S-----------------------------------------SNLPPSLLDLLLQGIAQN 488 (1034)
T ss_pred EEEEeeeeccccccccCcc-c-----------------------------------------ccCCHHHHHHHHHHHhhc
Confidence 9999999998877532211 0 000122333445555544
Q ss_pred ceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEE
Q 002398 516 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595 (928)
Q Consensus 516 ~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (928)
.+-....++..+...-+.+||.|.||+.|+..+|..+.. .+...++++++||+|.||||+|+
T Consensus 489 t~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~~FNS~kK~~gvv 550 (1034)
T KOG0204|consen 489 TTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVYPFNSVKKRMGVV 550 (1034)
T ss_pred CCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEeccCcccceeeEE
Confidence 433333333333333456899999999999999987754 23566788999999999999999
Q ss_pred EEeCCCeEEEEEecCcHHHHHHHhhc----------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHH--HHHHHHHHH
Q 002398 596 VRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEYADAGLRTLILAYRELDEK--EYKQFNEEF 663 (928)
Q Consensus 596 v~~~~g~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~--e~~~~~~~~ 663 (928)
++.+++..++|+|||.|.++..|... +++.+..+++.++.|+.+||||+|+|||+.... +-.+|..
T Consensus 551 i~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-- 628 (1034)
T KOG0204|consen 551 IKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-- 628 (1034)
T ss_pred EEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc--
Confidence 99988773499999999999999763 234556888999999999999999999995433 1111210
Q ss_pred HHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCC
Q 002398 664 TEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 743 (928)
Q Consensus 664 ~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~ 743 (928)
.+..+.+|+++|++||+||+||||+++|+.|+.|||.|.|+|||+..||.+||.+|||+.++
T Consensus 629 ------------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~ 690 (1034)
T KOG0204|consen 629 ------------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPG 690 (1034)
T ss_pred ------------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCC
Confidence 13456899999999999999999999999999999999999999999999999999999876
Q ss_pred ceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhh
Q 002398 744 MRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 823 (928)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~ 823 (928)
.. .+++.|++++.+.+++..+..+.+.
T Consensus 691 ~d----------------------------------------------------~~~lEG~eFr~~s~ee~~~i~pkl~- 717 (1034)
T KOG0204|consen 691 GD----------------------------------------------------FLALEGKEFRELSQEERDKIWPKLR- 717 (1034)
T ss_pred Cc----------------------------------------------------cceecchhhhhcCHHHHHhhhhhhe-
Confidence 43 2367777777777766666666664
Q ss_pred cCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEE--cCcchhhHhHhcceecccccc--cch
Q 002398 824 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LER 899 (928)
Q Consensus 824 ~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~--~g~~~~~a~~~aD~vi~~f~~--l~~ 899 (928)
|.+|.+|.+|..+|+.|++ .|++|++.|||.||.|||++||||.|| +|+|. ||++||++|++++| +++
T Consensus 718 -----VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk 789 (1034)
T KOG0204|consen 718 -----VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVK 789 (1034)
T ss_pred -----eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHH
Confidence 9999999999999999998 899999999999999999999999988 46666 99999999999888 889
Q ss_pred hhhcchhhhHHHhhhhheeeeecccccc
Q 002398 900 LLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 900 lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
. +.|||+.|.+|+|+++|++.-|++++
T Consensus 790 ~-v~WGR~VY~nIqKFiQFQLTVNVvAl 816 (1034)
T KOG0204|consen 790 A-VKWGRNVYDNIQKFLQFQLTVNVVAL 816 (1034)
T ss_pred H-HHhhhHHHHHHHHhheeEEEEEEEee
Confidence 8 89999999999999999999999886
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-96 Score=904.72 Aligned_cols=686 Identities=21% Similarity=0.256 Sum_probs=537.1
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCC---------CCCCcccchhhhhHhhhhh
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLS---------PYSAVSNVLPLVVVIGATM 118 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~---------~~~~~~~~~~l~~vl~~~~ 118 (928)
.++|+++||+|+++..+...++ +.|++||..+++++++++++++++... ..+.+...+++++++++++
T Consensus 42 ~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 118 (997)
T TIGR01106 42 AAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITG 118 (997)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHH
Confidence 3667889999999887766543 899999999999999999999776311 1134556677888999999
Q ss_pred hHHHHHHHHHHhhhHHHh---cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCC
Q 002398 119 GKEVLEDWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (928)
Q Consensus 119 i~~~~~d~~r~k~~~~~n---~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~Lt 195 (928)
+..+++++++++.++.++ +.+++|+ |||++++|++++|+|||+|.|++||.|||||+|++|++ +.||||+||
T Consensus 119 ~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LT 193 (997)
T TIGR01106 119 CFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLT 193 (997)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccC
Confidence 999999999999988776 4689999 99999999999999999999999999999999999976 899999999
Q ss_pred CCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEe
Q 002398 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFT 275 (928)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~t 275 (928)
|||.|+.|.++... ..+++.+|++++||.+.. |++.|+|++|
T Consensus 194 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V~~t 235 (997)
T TIGR01106 194 GESEPQTRSPEFTH-------------------------------------ENPLETRNIAFFSTNCVE-GTARGIVVNT 235 (997)
T ss_pred CCCCceeccCCCcc-------------------------------------cCccccCCeEEeccEeee-eeEEEEEEEc
Confidence 99999999875321 123566778888887775 7899999999
Q ss_pred cCCcceeeccC---CCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcch
Q 002398 276 GRDTKVFQNST---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (928)
Q Consensus 276 G~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
|.+|++++... ..+.+++++++.+++++..+..+.++++++.++++.+... .|.
T Consensus 236 G~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-------------- 292 (997)
T TIGR01106 236 GDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TWL-------------- 292 (997)
T ss_pred cccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CHH--------------
Confidence 99998766554 4566689999999999999888888777776665533211 221
Q ss_pred hHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCccc
Q 002398 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
..+..++.+++.+||++|+++++++...++.+| +++++++|+++.+|+||++++||||||||||
T Consensus 293 ------~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT 356 (997)
T TIGR01106 293 ------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356 (997)
T ss_pred ------HHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCcee
Confidence 245566788888899999999999999999988 7889999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHH
Q 002398 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (928)
Q Consensus 433 ~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 512 (928)
+|+|+|.++++++..|..+... . ..+. .........+.++.++
T Consensus 357 ~n~m~v~~~~~~~~~~~~~~~~-----------~--------------~~~~------------~~~~~~~~~~~ll~~~ 399 (997)
T TIGR01106 357 QNRMTVAHMWFDNQIHEADTTE-----------D--------------QSGV------------SFDKSSATWLALSRIA 399 (997)
T ss_pred cCceEEEEEEECCeEEecCCcc-----------C--------------CCCc------------cCCcccHHHHHHHHHH
Confidence 9999999999888765421100 0 0000 0001123455788899
Q ss_pred hhcceeeccccCCC--CceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCc
Q 002398 513 AICHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590 (928)
Q Consensus 513 ~lc~~~~~~~~~~~--~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rk 590 (928)
++||++.+..+... -...+..++|+|.||++++...+.... ..+..|+.++.+||+|+||
T Consensus 400 alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------------------~~~~~~~~v~~~pF~s~rK 461 (997)
T TIGR01106 400 GLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------------------EMRERNPKVVEIPFNSTNK 461 (997)
T ss_pred HHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------------------HHHhhCceeEEeccCCCCc
Confidence 99998766432111 011244689999999999986443210 0135678889999999999
Q ss_pred eEEEEEEeC---CCeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHH
Q 002398 591 RMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658 (928)
Q Consensus 591 rmsviv~~~---~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~ 658 (928)
||++++... ++++++|+|||||.|+++|+.. +++.++.+.+.+++|+++|+||+++|||.++.+++.+
T Consensus 462 ~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~ 541 (997)
T TIGR01106 462 YQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPE 541 (997)
T ss_pred eEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccc
Confidence 999998643 3578999999999999999641 2345677888899999999999999999998765432
Q ss_pred -HHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 659 -FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 659 -~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
|.. +++ ..+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++
T Consensus 542 ~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 542 GFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred cccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 211 110 013448999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHH
Q 002398 738 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 817 (928)
Q Consensus 738 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~ 817 (928)
|++.++.... . .+.... ... .+.. ++.....++++|.+++.+.++++.+
T Consensus 606 gi~~~~~~~~----~--------------~i~~~~----~~~----~~~~----~~~~~~~~vi~G~~l~~l~~~el~~- 654 (997)
T TIGR01106 606 GIISEGNETV----E--------------DIAARL----NIP----VSQV----NPRDAKACVVHGSDLKDMTSEQLDE- 654 (997)
T ss_pred CCCCCCccch----h--------------hhhhhc----ccc----cccc----ccccccceEEEhHHhhhCCHHHHHH-
Confidence 9987543210 0 000000 000 0000 0111224799999998877655443
Q ss_pred HHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEc--CcchhhHhHhcceeccccc
Q 002398 818 FLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 818 ~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~--g~~~~~a~~~aD~vi~~f~ 895 (928)
+...++.+||||++|+||.++|+.+|+ .|++|+|+|||.||++||++|||||+|+ |+++ |+++||+++++++
T Consensus 655 ---~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~ 728 (997)
T TIGR01106 655 ---ILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDN 728 (997)
T ss_pred ---HHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCC
Confidence 444456679999999999999999998 8999999999999999999999999994 4555 8999999999954
Q ss_pred c--cchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 896 F--LERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 896 ~--l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+ ++++ +.|||++|.|+++++.|.+++|++.+
T Consensus 729 f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~ 761 (997)
T TIGR01106 729 FASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEI 761 (997)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4 8888 99999999999999999999998764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-94 Score=888.25 Aligned_cols=654 Identities=21% Similarity=0.289 Sum_probs=500.1
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccC--C-------CC-CCcccc---hhhhhHh
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPL--S-------PY-SAVSNV---LPLVVVI 114 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~--~-------~~-~~~~~~---~~l~~vl 114 (928)
.++|+++||+|+++.++.+.++ +.+++||+++++++|+++++++++.. . +. +|+..+ +++++++
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~ 142 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVV 142 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHh
Confidence 4678889999999999886554 88999999999999999999998731 0 11 233322 2233334
Q ss_pred hhhhhHHHHHHHHHHhhhHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCC
Q 002398 115 GATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNL 194 (928)
Q Consensus 115 ~~~~i~~~~~d~~r~k~~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~L 194 (928)
+++++.++.+++..++.++..++.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|
T Consensus 143 ~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~----l~VdES~L 217 (941)
T TIGR01517 143 LVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS----LEIDESSI 217 (941)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc----EEEEeccc
Confidence 45555555555555544444456799999 99999999999999999999999999999999999954 99999999
Q ss_pred CCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEE
Q 002398 195 DGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIF 274 (928)
Q Consensus 195 tGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~ 274 (928)
||||.|+.|.+++. |++++||.+.+ |.+.++|++
T Consensus 218 TGES~pv~K~~~~~---------------------------------------------n~v~~GT~v~~-G~~~~iV~~ 251 (941)
T TIGR01517 218 TGESDPIKKGAPKD---------------------------------------------SFLLSGTVVNE-GSGRMLVTA 251 (941)
T ss_pred CCCCCcccccCCCC---------------------------------------------ceEEeCCeEEe-eEEEEEEEE
Confidence 99999999986432 34444444443 449999999
Q ss_pred ecCCcce---eeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcc
Q 002398 275 TGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPK 351 (928)
Q Consensus 275 tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 351 (928)
||.+|.+ ..+....+ +++++++.++++...+..+.++++++.++++.+...... .|.. .. .+.
T Consensus 252 tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~------~~~~---~~----~~~ 317 (941)
T TIGR01517 252 VGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI------IRGD---GR----DTE 317 (941)
T ss_pred eCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------cccc---cc----ccc
Confidence 9999954 44444444 457999999999999888888777777666533110000 0000 00 000
Q ss_pred hhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcc
Q 002398 352 RAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTL 431 (928)
Q Consensus 352 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTL 431 (928)
.....+...+..++.+++.+||++|++.+++....++.++ +++++++|+++.+|.||++++|||||||||
T Consensus 318 ~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTL 387 (941)
T TIGR01517 318 EDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTL 387 (941)
T ss_pred hhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCce
Confidence 0112344578889999999999999999999999998888 889999999999999999999999999999
Q ss_pred cccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHH
Q 002398 432 TCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 511 (928)
Q Consensus 432 T~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (928)
|+|+|.+.+++..+..+.... +.. . ......+++..
T Consensus 388 T~n~m~v~~~~~~~~~~~~~~--------------------------------------~~~-----~-~~~~~~~~l~~ 423 (941)
T TIGR01517 388 TQNVMSVVQGYIGEQRFNVRD--------------------------------------VLR-----N-VPKHVRNILVE 423 (941)
T ss_pred eeceEEEEEEEEecceEecCc--------------------------------------ccc-----c-CCHHHHHHHHH
Confidence 999999999987654432110 000 0 01123345555
Q ss_pred HhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCce
Q 002398 512 LAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKR 591 (928)
Q Consensus 512 l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkr 591 (928)
.+.||+..+...++.+ ..+..+||+|.||++++...|..... .+..+++++.+||+|+|||
T Consensus 424 ~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 424 GISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLLLLGRDYQE------------------VRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred HHHhCCCCccccCCCC-ccccCCCccHHHHHHHHHHcCCCHHH------------------HHhhchhccccccCCCCCe
Confidence 5555554442211111 12446899999999999887643211 0135677889999999999
Q ss_pred EEEEEEeCCCeEEEEEecCcHHHHHHHhhc----ch-----hhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHH
Q 002398 592 MSVIVRSEEGTLLLLSKGADSVMFERLAEN----GR-----EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 662 (928)
Q Consensus 592 msviv~~~~g~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~ 662 (928)
|+++++.+++++++|+|||||.|+++|+.. +. +.++.+.+.+++|+++|+||+++|||.++.+++..|
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~--- 561 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK--- 561 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc---
Confidence 999999887889999999999999999752 11 135677888999999999999999999876543322
Q ss_pred HHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccC
Q 002398 663 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742 (928)
Q Consensus 663 ~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~ 742 (928)
+..|+||+|+|+++++||+|++++++|++|+++||++||+|||+..||.++|++|||..+
T Consensus 562 --------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~ 621 (941)
T TIGR01517 562 --------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF 621 (941)
T ss_pred --------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC
Confidence 223689999999999999999999999999999999999999999999999999999864
Q ss_pred CceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHh
Q 002398 743 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (928)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~ 822 (928)
+. .+++|+++....++++.+.+.
T Consensus 622 ~~------------------------------------------------------~vi~G~~~~~l~~~el~~~i~--- 644 (941)
T TIGR01517 622 GG------------------------------------------------------LAMEGKEFRRLVYEEMDPILP--- 644 (941)
T ss_pred Cc------------------------------------------------------eEeeHHHhhhCCHHHHHHHhc---
Confidence 32 256777776655555444433
Q ss_pred hcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchh
Q 002398 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (928)
Q Consensus 823 ~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~l 900 (928)
+..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+.+..+.|+++||++++++++ +.++
T Consensus 645 ---~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~ 720 (941)
T TIGR01517 645 ---KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRA 720 (941)
T ss_pred ---cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHH
Confidence 3459999999999999999998 899999999999999999999999999523333399999999996544 9999
Q ss_pred hhcchhhhHHHhhhhheeeeecccccc
Q 002398 901 LLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 901 ll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+.|||++|+|+++++.|.+++|+..+
T Consensus 721 -i~~gR~~~~ni~k~i~~~l~~n~~~i 746 (941)
T TIGR01517 721 -VKWGRNVYDNIRKFLQFQLTVNVVAV 746 (941)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999998754
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-93 Score=889.05 Aligned_cols=703 Identities=21% Similarity=0.260 Sum_probs=516.1
Q ss_pred hhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHHH
Q 002398 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRR 128 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r 128 (928)
++|++.||+|.+..++.+++ +.|+++|..|++++++++++++++ .++|...+.++++++++.+...+++++.
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788899999999887666 899999999999999999888876 3555666667777777888888888888
Q ss_pred HhhhHHHh--cceEEEEeCCCeEEEEecccCccccEEEec--cCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeec
Q 002398 129 KKQDIEVN--NRKVKVHCGEGAFDYTKWRDLKVGDVVKVE--KDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (928)
Q Consensus 129 ~k~~~~~n--~~~~~v~~r~g~~~~i~~~~L~vGDII~l~--~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~ 204 (928)
.++.+++. +..++|+ |||+|++|++++|+|||||.|+ +|+.|||||+||+|+ |.||||+|||||.|+.|.
T Consensus 218 ~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-----~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-----CIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-----EEEecccccCCccceecc
Confidence 88777765 5689999 9999999999999999999999 999999999999996 999999999999999998
Q ss_pred ccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeec------CCeEEEEEEEecCC
Q 002398 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRN------TDCIYGAVIFTGRD 278 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~------t~~~~g~Vv~tG~~ 278 (928)
+.+.... . .+. +. ......+|++++||.+.. .|.+.|+|++||.+
T Consensus 292 ~~~~~~~-~-~~~-------~~--------------------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~ 342 (1054)
T TIGR01657 292 PIPDNGD-D-DED-------LF--------------------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342 (1054)
T ss_pred cCCcccc-c-ccc-------cc--------------------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcc
Confidence 8643100 0 000 00 011234556666666653 46799999999999
Q ss_pred cceee---ccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHH
Q 002398 279 TKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAV 355 (928)
Q Consensus 279 Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 355 (928)
|..++ ....++.+.+++++.+.+++.+++.+.++.+++.++ .++.. . .+|
T Consensus 343 T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~--~------~~~------------------ 395 (1054)
T TIGR01657 343 TSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKD--G------RPL------------------ 395 (1054)
T ss_pred ccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHc--C------CcH------------------
Confidence 95544 334455567888888877766654443332222211 11111 0 022
Q ss_pred HHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccc
Q 002398 356 AAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (928)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (928)
...+++++.+++.+||++||++++++...+..++ ++++++|+++.++|.||+|+++|||||||||+|+
T Consensus 396 --~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~ 463 (1054)
T TIGR01657 396 --GKIILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDG 463 (1054)
T ss_pred --HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCC
Confidence 2368889999999999999999999999999988 7899999999999999999999999999999999
Q ss_pred eEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhc
Q 002398 436 MEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 515 (928)
Q Consensus 436 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc 515 (928)
|.|.+++..+....... . . ..........+..++++|
T Consensus 464 m~v~~v~~~~~~~~~~~-------------~------------------------~------~~~~~~~~~~~~~~~a~C 500 (1054)
T TIGR01657 464 LDLRGVQGLSGNQEFLK-------------I------------------------V------TEDSSLKPSITHKALATC 500 (1054)
T ss_pred eeEEeEecccCcccccc-------------c------------------------c------ccccccCchHHHHHHHhC
Confidence 99999875432100000 0 0 000001223567789999
Q ss_pred ceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCee------EEEecCCCCCcceeEEEEEeeeecccCCC
Q 002398 516 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI------SVHELDPVTGTKVERSYSLLNVLEFSSSR 589 (928)
Q Consensus 516 ~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~------~v~~~~~~~~~~~~~~~~il~~~~F~s~r 589 (928)
|++....+ ...++|.|.|+++++ |+.+........ .+.... ....+++++++||+|++
T Consensus 501 ~~~~~~~~-------~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~il~~~pF~S~~ 564 (1054)
T TIGR01657 501 HSLTKLEG-------KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDD------PPQELSIIRRFQFSSAL 564 (1054)
T ss_pred CeeEEECC-------EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccC------CCceEEEEEEEeecCCC
Confidence 99865321 235899999999975 454432110000 000000 12579999999999999
Q ss_pred ceEEEEEEeCC-CeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhh
Q 002398 590 KRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKN 668 (928)
Q Consensus 590 krmsviv~~~~-g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~ 668 (928)
||||||++.++ +++++|+|||||.|+++|.+. ..++++.+.+++|+++|+|||++|||++++.++.++..
T Consensus 565 krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~------- 635 (1054)
T TIGR01657 565 QRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD------- 635 (1054)
T ss_pred CEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh-------
Confidence 99999999864 578999999999999999854 45778889999999999999999999998543322211
Q ss_pred hcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEE
Q 002398 669 SVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVI 748 (928)
Q Consensus 669 ~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~ 748 (928)
.+ ++.+|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.+||++|||+.++..++.
T Consensus 636 ---~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~ 704 (1054)
T TIGR01657 636 ---LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLIL 704 (1054)
T ss_pred ---cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEE
Confidence 12 2568999999999999999999999999999999999999999999999999999999987665554
Q ss_pred EeCCCCc-----cccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhh
Q 002398 749 ISSETPE-----SKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 823 (928)
Q Consensus 749 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~ 823 (928)
.+....+ ...+...+...... ............ .........+.++++|+++..+.+. ..+.+..+..
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~ 777 (1054)
T TIGR01657 705 AEAEPPESGKPNQIKFEVIDSIPFAS----TQVEIPYPLGQD--SVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLS 777 (1054)
T ss_pred eecccccCCCCceEEEEecCcccccc----ccccccCccccc--chhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHh
Confidence 4321100 00000000000000 000000000000 0000122346789999999876432 2234445554
Q ss_pred cCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhh
Q 002398 824 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLL 901 (928)
Q Consensus 824 ~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~ll 901 (928)
.+ .||||++|+||..+|+.+|+ .|++|+|+|||+||++||++|||||||++.| |..+|||++.++++ +..+
T Consensus 778 ~~--~VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~- 850 (1054)
T TIGR01657 778 HT--TVFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNV- 850 (1054)
T ss_pred cC--eEEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHH-
Confidence 44 49999999999999999998 8999999999999999999999999997665 56899999987555 8888
Q ss_pred hcchhhhHHHhhhhheeeeeccccc
Q 002398 902 LVHGHWCYRRISSMVCFTLKMLIDK 926 (928)
Q Consensus 902 l~~gr~~~~~i~~~i~~~~~~n~~~ 926 (928)
+.+||.++.++.+++.|.+.+++..
T Consensus 851 I~eGR~~l~~~~~~~~~~~~~~~~~ 875 (1054)
T TIGR01657 851 IREGRCALVTSFQMFKYMALYSLIQ 875 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999888877776643
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=871.26 Aligned_cols=679 Identities=22% Similarity=0.292 Sum_probs=517.9
Q ss_pred HHHHHhhhHHHHHHHHHHHhccc-CCC-----CCCcccchhhhhHhhhhhhHHHHHHHHHHhhhHHHh---cceEEEEeC
Q 002398 75 LFEQFRRVANVYFLICAILSFTP-LSP-----YSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVN---NRKVKVHCG 145 (928)
Q Consensus 75 l~~qf~~~~n~~~l~~~il~~~~-~~~-----~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~~~~v~~r 145 (928)
+++||++|++++++++++++++. ..+ ...|...+.++++++++++..++++++.+++.+.+. +.+++|+ |
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi-R 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL-R 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-E
Confidence 47899999999999999999985 211 123445566777788888889999999998876665 6789999 9
Q ss_pred CCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEE
Q 002398 146 EGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAII 225 (928)
Q Consensus 146 ~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i 225 (928)
||++++|++++|+|||||.|++||.|||||+|+++++ |.||||+|||||.|+.|.++.....
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~-------------- 141 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE-------------- 141 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc--------------
Confidence 9999999999999999999999999999999999976 9999999999999999987532110
Q ss_pred EEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceee---ccCCCCCcccHHHHHHhHH
Q 002398 226 RCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKI 302 (928)
Q Consensus 226 ~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~ 302 (928)
...+.+.+|++++||.+.+ |++.++|++||.+|++++ +...++.+++++++.++++
T Consensus 142 --------------------~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 142 --------------------RAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred --------------------ccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 1123456788888988887 889999999999997764 5556777889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHH
Q 002398 303 IYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEI 382 (928)
Q Consensus 303 ~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~ 382 (928)
+..++.+.++++++.++++..+...... ...|+ ..++..+..++.+++.+||++|++++++
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti 261 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGHFNDPAL---GGGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITT 261 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccc---cchhH----------------HHHHHHHHHHHhhhhhccccccHHHHHH
Confidence 9998888777777766554322110000 00121 2233455677889999999999999999
Q ss_pred HHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHh
Q 002398 383 VKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARR 462 (928)
Q Consensus 383 ~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (928)
+...++.+| +++++++|+++.+|+||++++||||||||||+|+|++.+++..+..+.. ...
T Consensus 262 ~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~-------- 322 (917)
T TIGR01116 262 CLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS-LNE-------- 322 (917)
T ss_pred HHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc-cce--------
Confidence 999999998 7889999999999999999999999999999999999999876543210 000
Q ss_pred cCCCCcccchhhhccccccCCCccCc--hhhhcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHH
Q 002398 463 KGSPLEEEVTEEQEDKASIKGFNFED--ERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAA 540 (928)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~a 540 (928)
....+..+.. ..+.+............+.++.++++||++....++..+.++ ..++|+|.|
T Consensus 323 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~-~~gdp~E~A 385 (917)
T TIGR01116 323 ----------------FCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYE-KVGEATEAA 385 (917)
T ss_pred ----------------EEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCcee-eccChhHHH
Confidence 0000000000 000000000011234566789999999998765433222222 147999999
Q ss_pred HHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhh
Q 002398 541 FVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAE 620 (928)
Q Consensus 541 lv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~ 620 (928)
|++++.+.|+....+....+.....+.. ......|++++.+||+|+||||||+++++ +++++|+|||||.|+++|+.
T Consensus 386 Ll~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~ 462 (917)
T TIGR01116 386 LKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTH 462 (917)
T ss_pred HHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccc
Confidence 9999999998766544333322221110 01135688999999999999999999974 67899999999999999964
Q ss_pred c----------chhhHHHHHHHHHHHHh-ccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccc
Q 002398 621 N----------GREFEEQTKEHINEYAD-AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 689 (928)
Q Consensus 621 ~----------~~~~~~~~~~~l~~~~~-~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl 689 (928)
. +++.++.+.+++++|++ +|+|||++|||.++.++.. +. . .+ ....+.+|+||
T Consensus 463 ~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~-----~~~~~~~e~~l 526 (917)
T TIGR01116 463 ILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SD-----PANFEAIESDL 526 (917)
T ss_pred eecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-cc-----chhhhhhcCCc
Confidence 1 13456778889999999 9999999999999764321 10 0 01 01235689999
Q ss_pred eEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHH
Q 002398 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 769 (928)
Q Consensus 690 ~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (928)
+|+|+++++||+|++++++|++|+++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 527 ~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~---------------------- 584 (917)
T TIGR01116 527 TFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT---------------------- 584 (917)
T ss_pred EEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc----------------------
Confidence 9999999999999999999999999999999999999999999999999986442211
Q ss_pred HHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC
Q 002398 770 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 849 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~ 849 (928)
...++|..+..+.+++... ..++.+||||++|+||.++|+.+|+ .
T Consensus 585 ----------------------------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~ 629 (917)
T TIGR01116 585 ----------------------------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-Q 629 (917)
T ss_pred ----------------------------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-c
Confidence 1245565555433322221 1235679999999999999999997 8
Q ss_pred CCeEEEEcCCccCHHHHHhCceeEEEc-CcchhhHhHhcceeccc--ccccchhhhcchhhhHHHhhhhheeeeeccccc
Q 002398 850 SSTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMVCFTLKMLIDK 926 (928)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~AdvGIa~~-g~~~~~a~~~aD~vi~~--f~~l~~lll~~gr~~~~~i~~~i~~~~~~n~~~ 926 (928)
|+.|+|+|||.||++||++|||||+|+ |++. ++.+||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999999999994 4444 89999999999 6669999 7999999999999999999999865
Q ss_pred c
Q 002398 927 L 927 (928)
Q Consensus 927 i 927 (928)
+
T Consensus 707 ~ 707 (917)
T TIGR01116 707 V 707 (917)
T ss_pred H
Confidence 3
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-90 Score=843.57 Aligned_cols=619 Identities=19% Similarity=0.242 Sum_probs=498.7
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (928)
.++|+++||+|+++..+.+.++ +.|++||.+|++++++++++++++ .+.+..++.++++++++.+.++++++|
T Consensus 73 a~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~----~~~~~~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 73 VESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYA----TEDLFAAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999887554 899999999999999999999987 355667777788888999999999999
Q ss_pred HHhhhHHH---hcceEEEEeCC------CeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCC
Q 002398 128 RKKQDIEV---NNRKVKVHCGE------GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGET 198 (928)
Q Consensus 128 r~k~~~~~---n~~~~~v~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs 198 (928)
..++.+.+ .+.+++|+ || |++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|||||
T Consensus 146 a~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES 220 (902)
T PRK10517 146 STKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGES 220 (902)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCC
Confidence 98775544 47889999 88 789999999999999999999999999999999976 899999999999
Q ss_pred cceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCC
Q 002398 199 NLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRD 278 (928)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~ 278 (928)
.|+.|.+++.... ...+.+.+|++|+||.+.+ |.+.++|++||.+
T Consensus 221 ~PV~K~~~~~~~~----------------------------------~~~~~~~~n~vfaGT~V~~-G~~~~vV~atG~~ 265 (902)
T PRK10517 221 LPVEKFATTRQPE----------------------------------HSNPLECDTLCFMGTNVVS-GTAQAVVIATGAN 265 (902)
T ss_pred Cceeccccccccc----------------------------------ccCccccccceeeCceEee-eeEEEEEEEeccc
Confidence 9999998753210 0112345566777777765 6699999999999
Q ss_pred ccee---eccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHH
Q 002398 279 TKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAV 355 (928)
Q Consensus 279 Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 355 (928)
|.++ .....+..+++++++.+++++.++..+.++++.+.++++.+... +|
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~~------------------ 318 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------DW------------------ 318 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------CH------------------
Confidence 9654 44455666789999999999998888888777776655433211 12
Q ss_pred HHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccc
Q 002398 356 AAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (928)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (928)
...+..++.+++.+||++||+.+++....++.+| +++++++|+++.+|.||++|+||||||||||+|+
T Consensus 319 --~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~ 386 (902)
T PRK10517 319 --WEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDK 386 (902)
T ss_pred --HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccce
Confidence 2267778999999999999999999999988888 8899999999999999999999999999999999
Q ss_pred eEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhc
Q 002398 436 MEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 515 (928)
Q Consensus 436 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc 515 (928)
|.+.++... .+.+ .++++...++|
T Consensus 387 m~V~~~~~~---~~~~-----------------------------------------------------~~~ll~~a~l~ 410 (902)
T PRK10517 387 IVLENHTDI---SGKT-----------------------------------------------------SERVLHSAWLN 410 (902)
T ss_pred EEEEEEecC---CCCC-----------------------------------------------------HHHHHHHHHhc
Confidence 999875310 0000 01233444443
Q ss_pred ceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEE
Q 002398 516 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595 (928)
Q Consensus 516 ~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (928)
.... . ..+||.|.|++.++...+.. .....|+.+..+||+|+||||+++
T Consensus 411 ~~~~----~-------~~~~p~d~All~~a~~~~~~--------------------~~~~~~~~~~~~pFds~~k~msvv 459 (902)
T PRK10517 411 SHYQ----T-------GLKNLLDTAVLEGVDEESAR--------------------SLASRWQKIDEIPFDFERRRMSVV 459 (902)
T ss_pred CCcC----C-------CCCCHHHHHHHHHHHhcchh--------------------hhhhcCceEEEeeeCCCcceEEEE
Confidence 3211 0 13699999999998753210 012456778899999999999999
Q ss_pred EEeCCCeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHH
Q 002398 596 VRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEA 666 (928)
Q Consensus 596 v~~~~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a 666 (928)
++.+++...+++|||+|.|+++|+.. +++.++.+.+..+.++.+|+|++++|||+++.++. ++
T Consensus 460 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~------- 531 (902)
T PRK10517 460 VAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY------- 531 (902)
T ss_pred EEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc-------
Confidence 99878888999999999999999742 22345667777889999999999999998865321 00
Q ss_pred hhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceE
Q 002398 667 KNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 746 (928)
Q Consensus 667 ~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~ 746 (928)
+ ...|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||....
T Consensus 532 ------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~--- 593 (902)
T PRK10517 532 ------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE--- 593 (902)
T ss_pred ------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC---
Confidence 0 1136899999999999999999999999999999999999999999999999999994210
Q ss_pred EEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCC
Q 002398 747 VIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA 826 (928)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~ 826 (928)
+++|.+++..-++++.+....
T Consensus 594 -----------------------------------------------------v~~G~el~~l~~~el~~~~~~------ 614 (902)
T PRK10517 594 -----------------------------------------------------VLIGSDIETLSDDELANLAER------ 614 (902)
T ss_pred -----------------------------------------------------ceeHHHHHhCCHHHHHHHHhh------
Confidence 456666655444444443332
Q ss_pred eEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcc
Q 002398 827 SVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVH 904 (928)
Q Consensus 827 ~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~ 904 (928)
..||+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ +..+.|+++||++++++++ +..+ +.+
T Consensus 615 ~~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~a-i~~ 691 (902)
T PRK10517 615 TTLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEG-VIE 691 (902)
T ss_pred CcEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHH-HHH
Confidence 239999999999999999998 8999999999999999999999999995 4445599999999998776 8888 899
Q ss_pred hhhhHHHhhhhheeeeecccccc
Q 002398 905 GHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 905 gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
||.+|.|+++++.|.+..|+..+
T Consensus 692 gR~i~~nI~k~i~~~ls~n~~~v 714 (902)
T PRK10517 692 GRRTFANMLKYIKMTASSNFGNV 714 (902)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999998654
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-89 Score=837.47 Aligned_cols=645 Identities=20% Similarity=0.247 Sum_probs=503.5
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHH-hhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQF-RRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDW 126 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf-~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~ 126 (928)
.++|+++||+|+++.++.+.++ +.+++|| ..|++++++++++++++. +.|...+.+++++++..+..+++++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~----g~~~~~~~i~~~i~~~~~i~~~qe~ 102 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM----GNIDDAVSITLAILIVVTVGFVQEY 102 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH----cchhhHHHHHhHHHHHHHHHHHHHH
Confidence 4667889999999988755443 8999999 899999999999999873 3444555555666667778899999
Q ss_pred HHHhhhHHHh---cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceee
Q 002398 127 RRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLK 203 (928)
Q Consensus 127 ~r~k~~~~~n---~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K 203 (928)
+.+++.+.+. +.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|||||.|+.|
T Consensus 103 ~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K 177 (884)
T TIGR01522 103 RSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSK 177 (884)
T ss_pred HHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceec
Confidence 9888876665 6789999 99999999999999999999999999999999999976 89999999999999999
Q ss_pred cccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceee
Q 002398 204 QALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283 (928)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~ 283 (928)
.+++..... .....+.+|+++.||.+.+ |.+.++|++||.+|.+++
T Consensus 178 ~~~~~~~~~---------------------------------~~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~gk 223 (884)
T TIGR01522 178 VTAPIPAAT---------------------------------NGDLAERSNIAFMGTLVRC-GHGKGIVVGTGSNTEFGA 223 (884)
T ss_pred ccccccccc---------------------------------cccccccCceEEeCCEEEe-eeEEEEEEEecCccHHHH
Confidence 987532100 0001233455555555554 569999999999996543
Q ss_pred ---ccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHH
Q 002398 284 ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360 (928)
Q Consensus 284 ---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
........++++++.+++++.++.++.++++++.+++.++ .. . +| ...
T Consensus 224 i~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~-~-------~~--------------------~~~ 274 (884)
T TIGR01522 224 VFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG-K-------DW--------------------LEM 274 (884)
T ss_pred HHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-C-------CH--------------------HHH
Confidence 3445566689999999999998877665555444443321 11 0 22 226
Q ss_pred HHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEE
Q 002398 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
+..++.+++.+||++||++++++...+..++ +++++++|+++.+|.||++++||||||||||+|+|.+.+
T Consensus 275 ~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~ 344 (884)
T TIGR01522 275 FTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTK 344 (884)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEE
Confidence 7778899999999999999999999999888 889999999999999999999999999999999999999
Q ss_pred EEEcCeecCC-CccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceee
Q 002398 441 CSIAGTSYGR-GVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTAL 519 (928)
Q Consensus 441 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~ 519 (928)
++..+..+.. ..... .+ ...+..++. .........+.+++.+.++||+..
T Consensus 345 i~~~~~~~~~~~~~~~---------~~--------------~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~ 395 (884)
T TIGR01522 345 IWTSDGLHTMLNAVSL---------NQ--------------FGEVIVDGD------VLHGFYTVAVSRILEAGNLCNNAK 395 (884)
T ss_pred EEecCceEeeccCCcc---------CC--------------CCccccccc------ccccccCHHHHHHHHHHhhhCCCe
Confidence 9875532210 00000 00 000000000 000112234567888999999876
Q ss_pred ccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeC
Q 002398 520 PEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE 599 (928)
Q Consensus 520 ~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~ 599 (928)
....+ + ...++|+|.||+++++..|+... ...|+.++.+||+|+||||+++++.+
T Consensus 396 ~~~~~--~---~~~g~p~e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~~k~m~v~~~~~ 450 (884)
T TIGR01522 396 FRNEA--D---TLLGNPTDVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSERKWMAVKCVHR 450 (884)
T ss_pred ecCCC--C---CcCCChHHHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCCCCeEEEEEEEc
Confidence 54221 1 12369999999999998775311 13577789999999999999999874
Q ss_pred -CCeEEEEEecCcHHHHHHHhhc----------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhh
Q 002398 600 -EGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKN 668 (928)
Q Consensus 600 -~g~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~ 668 (928)
++++++|+|||||.|+.+|... +++.++.+.+.+++++.+|+|++++|||.+
T Consensus 451 ~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------- 513 (884)
T TIGR01522 451 QDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------- 513 (884)
T ss_pred CCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------------
Confidence 5788999999999999999642 123456677888999999999999999865
Q ss_pred hcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEE
Q 002398 669 SVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVI 748 (928)
Q Consensus 669 ~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~ 748 (928)
+.+|+|+|+++++||+|++++++|+.|+++||+++|+|||+..||.++|+++||......
T Consensus 514 -----------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~--- 573 (884)
T TIGR01522 514 -----------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ--- 573 (884)
T ss_pred -----------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc---
Confidence 258999999999999999999999999999999999999999999999999999754321
Q ss_pred EeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeE
Q 002398 749 ISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV 828 (928)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~ 828 (928)
+++|+.+...-++++.+.+. +..
T Consensus 574 ---------------------------------------------------~v~g~~l~~~~~~~l~~~~~------~~~ 596 (884)
T TIGR01522 574 ---------------------------------------------------SVSGEKLDAMDDQQLSQIVP------KVA 596 (884)
T ss_pred ---------------------------------------------------eeEhHHhHhCCHHHHHHHhh------cCe
Confidence 34555555444444433332 345
Q ss_pred EEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchh
Q 002398 829 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGH 906 (928)
Q Consensus 829 v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr 906 (928)
||||++|+||..+|+.+|+ .|+.|+|+|||.||++||++|||||+|+....+.++.+||++++++++ +..+ +.+||
T Consensus 597 Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~-i~~gR 674 (884)
T TIGR01522 597 VFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSA-IEEGK 674 (884)
T ss_pred EEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHH-HHHHH
Confidence 9999999999999999998 899999999999999999999999999423334488999999988555 8888 99999
Q ss_pred hhHHHhhhhheeeeecccccc
Q 002398 907 WCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 907 ~~~~~i~~~i~~~~~~n~~~i 927 (928)
++|+|+++++.|.++.|+..+
T Consensus 675 ~~~~ni~k~i~~~l~~ni~~~ 695 (884)
T TIGR01522 675 GIFNNIKNFITFQLSTSVAAL 695 (884)
T ss_pred HHHHHHHHHHHHHhhhhHHHH
Confidence 999999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-89 Score=833.91 Aligned_cols=618 Identities=19% Similarity=0.244 Sum_probs=493.1
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (928)
.++|+++||+|+++..+.+.++ +.+++||..|++++++++++++++ .+.+...+.++++++++.+...+++++
T Consensus 39 v~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~----~~~~~~~~iI~~iv~~~~~i~~~~e~~ 111 (867)
T TIGR01524 39 VTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYL----TDDLEATVIIALMVLASGLLGFIQESR 111 (867)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHH----HhhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4678899999999998865443 899999999999999999999987 355666667778888888889999999
Q ss_pred HHhhhHH---HhcceEEEEeC------CCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCC
Q 002398 128 RKKQDIE---VNNRKVKVHCG------EGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGET 198 (928)
Q Consensus 128 r~k~~~~---~n~~~~~v~~r------~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs 198 (928)
.+++... +.+.+++|+ | ||++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|||||
T Consensus 112 a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES 186 (867)
T TIGR01524 112 AERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGES 186 (867)
T ss_pred HHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCC
Confidence 8776544 446889999 8 9999999999999999999999999999999999986 899999999999
Q ss_pred cceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCC
Q 002398 199 NLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRD 278 (928)
Q Consensus 199 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~ 278 (928)
.|+.|.+++.... .....+..|+++.||.+.+ |.+.++|++||.+
T Consensus 187 ~PV~K~~~~~~~~----------------------------------~~~~~~~~n~vfaGT~v~~-G~~~~~V~~tG~~ 231 (867)
T TIGR01524 187 LPVEKFVEDKRAR----------------------------------DPEILERENLCFMGTNVLS-GHAQAVVLATGSS 231 (867)
T ss_pred CcccccCCccccc----------------------------------cccccccccceecCCeEEE-eEEEEEEEEEcCc
Confidence 9999998753210 0011234566666666665 6699999999999
Q ss_pred ccee---eccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHH
Q 002398 279 TKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAV 355 (928)
Q Consensus 279 Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 355 (928)
|.++ ..... +.+++++++.+++++.++..+.++++++.++++.+... +|
T Consensus 232 T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~------------------ 283 (867)
T TIGR01524 232 TWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DW------------------ 283 (867)
T ss_pred cHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CH------------------
Confidence 9654 33444 45568999999999999988888887776655432211 22
Q ss_pred HHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccc
Q 002398 356 AAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNS 435 (928)
Q Consensus 356 ~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~ 435 (928)
...+..++.+++.+||++||++++++...++.+| +++++++|+++.+|.||++++||||||||||+|+
T Consensus 284 --~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~ 351 (867)
T TIGR01524 284 --LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDK 351 (867)
T ss_pred --HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCe
Confidence 2267778899999999999999999999998888 8899999999999999999999999999999999
Q ss_pred eEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhc
Q 002398 436 MEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 515 (928)
Q Consensus 436 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc 515 (928)
|++.++..... .. .++++...++|
T Consensus 352 m~v~~~~~~~~-----~~---------------------------------------------------~~~~l~~a~l~ 375 (867)
T TIGR01524 352 IELEKHIDSSG-----ET---------------------------------------------------SERVLKMAWLN 375 (867)
T ss_pred EEEEEEecCCC-----CC---------------------------------------------------HHHHHHHHHHh
Confidence 99988641100 00 01233333333
Q ss_pred ceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEE
Q 002398 516 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 595 (928)
Q Consensus 516 ~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (928)
.... . ..+||.|.|+++++....... ....++.++.+||+|+||||+++
T Consensus 376 ~~~~----~-------~~~~p~~~Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF~s~~k~ms~~ 424 (867)
T TIGR01524 376 SYFQ----T-------GWKNVLDHAVLAKLDESAARQ--------------------TASRWKKVDEIPFDFDRRRLSVV 424 (867)
T ss_pred CCCC----C-------CCCChHHHHHHHHHHhhchhh--------------------HhhcCceEEEeccCCCcCEEEEE
Confidence 2211 0 136999999999987532110 02456777889999999999999
Q ss_pred EEeCCCeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHH
Q 002398 596 VRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEA 666 (928)
Q Consensus 596 v~~~~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a 666 (928)
++++++..++|+||||+.|+++|+.. +++.++.+.+.++.++.+|+|++++|||+++.++.. +
T Consensus 425 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~------- 496 (867)
T TIGR01524 425 VENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F------- 496 (867)
T ss_pred EEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c-------
Confidence 99877778999999999999999742 123456778888999999999999999998754310 0
Q ss_pred hhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceE
Q 002398 667 KNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 746 (928)
Q Consensus 667 ~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~ 746 (928)
.+..|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..+.
T Consensus 497 ---------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~--- 558 (867)
T TIGR01524 497 ---------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND--- 558 (867)
T ss_pred ---------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---
Confidence 01236899999999999999999999999999999999999999999999999999995321
Q ss_pred EEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCC
Q 002398 747 VIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA 826 (928)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~ 826 (928)
+++|.++...-++++.+... +
T Consensus 559 -----------------------------------------------------v~~g~~l~~~~~~el~~~~~------~ 579 (867)
T TIGR01524 559 -----------------------------------------------------FLLGADIEELSDEELARELR------K 579 (867)
T ss_pred -----------------------------------------------------eeecHhhhhCCHHHHHHHhh------h
Confidence 34455544433333333322 2
Q ss_pred eEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcc
Q 002398 827 SVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVH 904 (928)
Q Consensus 827 ~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~ 904 (928)
..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ +..+.|+++||++++++++ +..+ +.+
T Consensus 580 ~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~a-i~~ 656 (867)
T TIGR01524 580 YHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEG-VIE 656 (867)
T ss_pred CeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHH-HHH
Confidence 349999999999999999998 8999999999999999999999999995 3444599999999998766 8888 899
Q ss_pred hhhhHHHhhhhheeeeecccccc
Q 002398 905 GHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 905 gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
||..|+|+++++.|.+..|+..+
T Consensus 657 gR~i~~ni~k~i~~~ls~n~~~~ 679 (867)
T TIGR01524 657 GRNTFGNILKYLKMTASSNFGNV 679 (867)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHH
Confidence 99999999999999999988654
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=829.80 Aligned_cols=634 Identities=20% Similarity=0.245 Sum_probs=491.7
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc--CCC-----CCCcccchhhhhHhhhhhhH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LSP-----YSAVSNVLPLVVVIGATMGK 120 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~~-----~~~~~~~~~l~~vl~~~~i~ 120 (928)
.++|+++||+|+++..+.+.++ +.+++||.+|+.++++++++++++. +.+ .+.|...+.++++++++.+.
T Consensus 51 a~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i 127 (903)
T PRK15122 51 AAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLL 127 (903)
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHH
Confidence 3678899999999988866443 8899999999999999999999874 111 12345666677888888999
Q ss_pred HHHHHHHHHhhhHHH---hcceEEEEeCC------CeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEe
Q 002398 121 EVLEDWRRKKQDIEV---NNRKVKVHCGE------GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVET 191 (928)
Q Consensus 121 ~~~~d~~r~k~~~~~---n~~~~~v~~r~------g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vde 191 (928)
+++++++..++.+.+ .+.+++|+ || |++++|++++|+|||||.|++||.|||||+|++|++ +.|||
T Consensus 128 ~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDE 202 (903)
T PRK15122 128 RFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQ 202 (903)
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEc
Confidence 999999998775555 46789999 88 489999999999999999999999999999999986 89999
Q ss_pred cCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEE
Q 002398 192 TNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGA 271 (928)
Q Consensus 192 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~ 271 (928)
|+|||||.|+.|.+.......... +.. .+......+..|++|.||.+.+ |.+.++
T Consensus 203 S~LTGES~PV~K~~~~~~~~~~~~-----------------------~~~-~~~~~~~~~~~n~vfaGT~V~~-G~~~~~ 257 (903)
T PRK15122 203 AVLTGEALPVEKYDTLGAVAGKSA-----------------------DAL-ADDEGSLLDLPNICFMGTNVVS-GTATAV 257 (903)
T ss_pred cccCCCCcceeeeccccccccccc-----------------------ccc-ccccCCcccccceEEeCCEEEe-eeEEEE
Confidence 999999999999863110000000 000 0000111234566666666665 669999
Q ss_pred EEEecCCcceeec---cCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCcc
Q 002398 272 VIFTGRDTKVFQN---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYY 348 (928)
Q Consensus 272 Vv~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 348 (928)
|++||.+|.+++. ... +...+++++.++++...+..+.++++.+.+++..+... +|
T Consensus 258 V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~---------~~----------- 316 (903)
T PRK15122 258 VVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKG---------DW----------- 316 (903)
T ss_pred EEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC---------CH-----------
Confidence 9999999975433 223 34568999999999888777666666555444322110 22
Q ss_pred CcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCC
Q 002398 349 DPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKT 428 (928)
Q Consensus 349 ~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKT 428 (928)
...+..++.+++.+||++||+.++++...++.++ +++++++|+++.+|.||++++||||||
T Consensus 317 ---------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKT 377 (903)
T PRK15122 317 ---------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKT 377 (903)
T ss_pred ---------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCC
Confidence 2256778899999999999999999999888888 889999999999999999999999999
Q ss_pred CcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHH
Q 002398 429 GTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKF 508 (928)
Q Consensus 429 GTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (928)
||||+|+|.+.+++..... . . +++
T Consensus 378 GTLT~~~m~V~~~~~~~~~-----~------------------------------------------------~---~~~ 401 (903)
T PRK15122 378 GTLTQDRIILEHHLDVSGR-----K------------------------------------------------D---ERV 401 (903)
T ss_pred cccccCeEEEEEEEcCCCC-----C------------------------------------------------h---HHH
Confidence 9999999999886521110 0 0 022
Q ss_pred HHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCC
Q 002398 509 LRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSS 588 (928)
Q Consensus 509 ~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~ 588 (928)
+...++| +... . ..+||.|.|+++++...|.... ...|+.+..+||++.
T Consensus 402 l~~a~l~-s~~~--~--------~~~~p~e~All~~a~~~~~~~~--------------------~~~~~~~~~~pF~s~ 450 (903)
T PRK15122 402 LQLAWLN-SFHQ--S--------GMKNLMDQAVVAFAEGNPEIVK--------------------PAGYRKVDELPFDFV 450 (903)
T ss_pred HHHHHHh-CCCC--C--------CCCChHHHHHHHHHHHcCchhh--------------------hhcCceEEEeeeCCC
Confidence 3333332 1110 0 1479999999999987654210 134667788999999
Q ss_pred CceEEEEEEeCCCeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHH
Q 002398 589 RKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 659 (928)
Q Consensus 589 rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~ 659 (928)
||||++++++.+|++++++||||+.|+++|... +++.++.+.+.++.++.+|+|++++|||.++.++..++
T Consensus 451 ~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~ 530 (903)
T PRK15122 451 RRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ 530 (903)
T ss_pred cCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc
Confidence 999999999878889999999999999999742 22345667778899999999999999999875432110
Q ss_pred HHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 660 NEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 660 ~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
..+..|.|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||
T Consensus 531 ---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 531 ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred ---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 01234689999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHH
Q 002398 740 LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819 (928)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~ 819 (928)
.... +++|.+++..-++++.+...
T Consensus 590 ~~~~--------------------------------------------------------vi~G~el~~~~~~el~~~v~ 613 (903)
T PRK15122 590 EPGE--------------------------------------------------------PLLGTEIEAMDDAALAREVE 613 (903)
T ss_pred CCCC--------------------------------------------------------ccchHhhhhCCHHHHHHHhh
Confidence 5210 45566666554444444433
Q ss_pred HHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--c
Q 002398 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--L 897 (928)
Q Consensus 820 ~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l 897 (928)
. ..||||++|+||.++|+.+|+ .|++|+|+|||.||+|||++|||||||+ +..+.|+++||++++++++ +
T Consensus 614 ----~--~~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~I 685 (903)
T PRK15122 614 ----E--RTVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVL 685 (903)
T ss_pred ----h--CCEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHH
Confidence 2 239999999999999999998 8999999999999999999999999995 3444499999999998666 8
Q ss_pred chhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 898 ERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 898 ~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
..+ +.+||..|+|+++++.|.+..|+..+
T Consensus 686 v~a-i~~gR~i~~nI~k~i~~~ls~n~~~~ 714 (903)
T PRK15122 686 EEG-VIKGRETFGNIIKYLNMTASSNFGNV 714 (903)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 888 89999999999999999999987653
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-88 Score=814.91 Aligned_cols=595 Identities=20% Similarity=0.262 Sum_probs=487.5
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (928)
.++|+++||+|.++..+.++| +.|+++|..|+++.++++++++++ .+.|...+.++++++++.+.+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~----~~~~~~~~~i~~~~~i~~~i~~~qe~~ 78 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIA----LENWVDFVIILGLLLLNATIGFIEENK 78 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hcchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 356788999999998666655 788999999999999999999998 345566666778888888999999999
Q ss_pred HHhhhHHH---hcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeec
Q 002398 128 RKKQDIEV---NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (928)
Q Consensus 128 r~k~~~~~---n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~ 204 (928)
..++.+.+ .+.+++|+ |||++++|+.++|+|||||.|++||.|||||+|++|++ +.||||+|||||.|+.|.
T Consensus 79 a~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 79 AGNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 88876554 47899999 99999999999999999999999999999999999986 899999999999999998
Q ss_pred ccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCccee--
Q 002398 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF-- 282 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~-- 282 (928)
+++.. |+||.+.+|. +.++|++||.+|.++
T Consensus 154 ~~~~v---------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i 185 (755)
T TIGR01647 154 TGDIA---------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKA 185 (755)
T ss_pred cCCee---------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHH
Confidence 76543 8888888777 999999999999654
Q ss_pred -eccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHH
Q 002398 283 -QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361 (928)
Q Consensus 283 -~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 361 (928)
+....++..++++++.+++++.+++++.++++++.++++.+.... +| ...+
T Consensus 186 ~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------~~--------------------~~~~ 237 (755)
T TIGR01647 186 AALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------SF--------------------REGL 237 (755)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CH--------------------HHHH
Confidence 344556666789999999999999888888887777665432210 22 2267
Q ss_pred HHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEE
Q 002398 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKC 441 (928)
Q Consensus 362 ~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (928)
..++.+++.+||++|++.++++...++.++ +++++++|+++.+|.||.+++||||||||||+|+|.+.++
T Consensus 238 ~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~ 307 (755)
T TIGR01647 238 QFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEI 307 (755)
T ss_pred HHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEE
Confidence 778999999999999999999999999888 8899999999999999999999999999999999999998
Q ss_pred EEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeecc
Q 002398 442 SIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPE 521 (928)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~ 521 (928)
+..+..+. .++++...++|+..
T Consensus 308 ~~~~~~~~-------------------------------------------------------~~~~l~~a~~~~~~--- 329 (755)
T TIGR01647 308 LPFFNGFD-------------------------------------------------------KDDVLLYAALASRE--- 329 (755)
T ss_pred EecCCCCC-------------------------------------------------------HHHHHHHHHHhCCC---
Confidence 75431110 01234444555420
Q ss_pred ccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCC-
Q 002398 522 VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE- 600 (928)
Q Consensus 522 ~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~- 600 (928)
.++||.|.|+++++.+.+. ....|++++.+||++.+|+|+++++.++
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~ 377 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLEFVPFDPVDKRTEATVEDPET 377 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEEEeccCCCCCeEEEEEEeCCC
Confidence 1369999999998876430 0134677889999999999999998764
Q ss_pred CeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHH
Q 002398 601 GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEE 680 (928)
Q Consensus 601 g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~ 680 (928)
|+.++++||||+.|+++|+.. ...++++.+.+++++.+|+|++++|+|..
T Consensus 378 g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~~----------------------------- 427 (755)
T TIGR01647 378 GKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELASRGYRALGVARTDE----------------------------- 427 (755)
T ss_pred ceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEcC-----------------------------
Confidence 788899999999999999753 24566778888999999999999998721
Q ss_pred HHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCcccccc
Q 002398 681 IAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLE 760 (928)
Q Consensus 681 ~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~ 760 (928)
|.+|+|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||.... +.+..
T Consensus 428 -----e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~------- 490 (755)
T TIGR01647 428 -----EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV------- 490 (755)
T ss_pred -----CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH-------
Confidence 3789999999999999999999999999999999999999999999999999996421 00000
Q ss_pred chhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHH
Q 002398 761 KSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKAL 840 (928)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~ 840 (928)
+.+|+.++...++++.+... . ..+|||++|+||..
T Consensus 491 ---------------------------------------l~~~~~~~~~~~~~~~~~~~----~--~~vfAr~~Pe~K~~ 525 (755)
T TIGR01647 491 ---------------------------------------LLKGDNRDDLPSGELGEMVE----D--ADGFAEVFPEHKYE 525 (755)
T ss_pred ---------------------------------------hcCCcchhhCCHHHHHHHHH----h--CCEEEecCHHHHHH
Confidence 00111111111122222222 2 23999999999999
Q ss_pred HHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHhhhhhee
Q 002398 841 VTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMVCF 918 (928)
Q Consensus 841 iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i~~~i~~ 918 (928)
+|+.+|+ .|++|+|+|||.||+|||++|||||+|+ +..+.|+++||++++++++ +..+ +.+||..|+|+++++.|
T Consensus 526 iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~ 602 (755)
T TIGR01647 526 IVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIY 602 (755)
T ss_pred HHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999998 8999999999999999999999999995 4455599999999999777 8888 89999999999999999
Q ss_pred eeeccccc
Q 002398 919 TLKMLIDK 926 (928)
Q Consensus 919 ~~~~n~~~ 926 (928)
.+..|+..
T Consensus 603 ~~~~n~~~ 610 (755)
T TIGR01647 603 RIAETIRI 610 (755)
T ss_pred HhcccHHH
Confidence 99999864
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-86 Score=747.92 Aligned_cols=721 Identities=20% Similarity=0.260 Sum_probs=527.4
Q ss_pred hhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHHH
Q 002398 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRR 128 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r 128 (928)
.+|+.-||+|.|..+..+.+ ..|+++..+|+++|..+..++|.. .+++.+++.++++.+.|.+...+|.++.
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999999988 899999999999999999999988 5677778888888888888888888887
Q ss_pred HhhhHHHhc--ceEEEEeCCCeEEEEecccCccccEEEecc-CCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecc
Q 002398 129 KKQDIEVNN--RKVKVHCGEGAFDYTKWRDLKVGDVVKVEK-DEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQA 205 (928)
Q Consensus 129 ~k~~~~~n~--~~~~v~~r~g~~~~i~~~~L~vGDII~l~~-ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~ 205 (928)
.+..+++-. ..|+|+ |+|.|++|.++||+||||+.+.+ +-..|||++|++|+ |.||||+|||||.|+.|.|
T Consensus 239 s~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-----civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-----CIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-----EEeecccccCCcccccccC
Confidence 777777753 579999 99999999999999999999998 99999999999999 9999999999999999999
Q ss_pred cccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceeecc
Q 002398 206 LDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNS 285 (928)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~~~ 285 (928)
.+.-.+ .+.-.+.+..-+..+..|.||.+++-+... .+-+.++|++||..|.-++..
T Consensus 313 l~~~~~--------~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~---------------g~~v~a~V~RTGF~T~KGqLV 369 (1140)
T KOG0208|consen 313 LPMGTD--------SLDSITISMSTNSRHTLFCGTKVLQARAYL---------------GGPVLAMVLRTGFSTTKGQLV 369 (1140)
T ss_pred Cccccc--------cCcCeeechhhcCcceeeccceEEEeecCC---------------CCceEEEEEeccccccccHHH
Confidence 862111 011112333345556778888888654111 244899999999999655544
Q ss_pred C---CCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHHH
Q 002398 286 T---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFL 362 (928)
Q Consensus 286 ~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (928)
+ .++.....+-+...++ +.++.+++++.++...+.....+ ...-..+.
T Consensus 370 RsilyPkP~~fkfyrds~~f----i~~l~~ia~~gfiy~~i~l~~~g-------------------------~~~~~iii 420 (1140)
T KOG0208|consen 370 RSILYPKPVNFKFYRDSFKF----ILFLVIIALIGFIYTAIVLNLLG-------------------------VPLKTIII 420 (1140)
T ss_pred HhhcCCCCcccHHHHHHHHH----HHHHHHHHHHHHHHHhHhHHHcC-------------------------CCHHHHhh
Confidence 4 3443334444444333 33344444444444333221111 01122688
Q ss_pred HHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEEE
Q 002398 363 TALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS 442 (928)
Q Consensus 363 ~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~ 442 (928)
+++.++...+|.+||+++++....+-.++ .+++|.|-+++.+...|+++.+|||||||||++.+.+.++.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 99999999999999999999999888888 89999999999999999999999999999999999998887
Q ss_pred EcCee-cCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeecc
Q 002398 443 IAGTS-YGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPE 521 (928)
Q Consensus 443 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~ 521 (928)
.-... ...... .... ....+ ++-.... +........+..+++.||++...
T Consensus 491 ~~~~~~~~~~~~--~~~~-~~~~~-------------------------~~~~l~~-~~~~~~~~~~~~a~atCHSL~~v 541 (1140)
T KOG0208|consen 491 PVERNVDDGPEL--KVVT-EDSLQ-------------------------LFYKLSL-RSSSLPMGNLVAAMATCHSLTLV 541 (1140)
T ss_pred eccccccccchh--hhhh-hhhcc-------------------------ceeeccc-cccCCchHHHHHHHhhhceeEEe
Confidence 53221 111000 0000 00000 0000000 01111234688999999988765
Q ss_pred ccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecC--------C---eeEEEecC---CCCCcceeEEEEEeeeecccC
Q 002398 522 VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQ--------T---SISVHELD---PVTGTKVERSYSLLNVLEFSS 587 (928)
Q Consensus 522 ~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~--------~---~~~v~~~~---~~~~~~~~~~~~il~~~~F~s 587 (928)
.+. ..++|.|.-+.+ ..||.+.+.+. + ...++... +...+...+.+-+++.+||+|
T Consensus 542 ~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S 611 (1140)
T KOG0208|consen 542 DGT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSS 611 (1140)
T ss_pred CCe-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccch
Confidence 432 246888877765 45677755210 0 11121111 111111223789999999999
Q ss_pred CCceEEEEEEeC-CCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHH
Q 002398 588 SRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEA 666 (928)
Q Consensus 588 ~rkrmsviv~~~-~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a 666 (928)
..+||||||.++ +.+.++|+|||||.|.+.|+++ .++.++++.++.|+.+|+|++++|+|.|+.. .|.+..
T Consensus 612 ~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~--- 683 (1140)
T KOG0208|consen 612 ALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQ--- 683 (1140)
T ss_pred hhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHh---
Confidence 999999999996 4678999999999999999976 6888999999999999999999999999875 343332
Q ss_pred hhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceE
Q 002398 667 KNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 746 (928)
Q Consensus 667 ~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~ 746 (928)
...++.+|.||+|+|++.+|++||+.++.+|++|.+|+|+++|+|||+..||+.+|++||++.+..++
T Consensus 684 ------------~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v 751 (1140)
T KOG0208|consen 684 ------------KLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKV 751 (1140)
T ss_pred ------------hccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeE
Confidence 22357889999999999999999999999999999999999999999999999999999999998887
Q ss_pred EEEeCCCCcccc-----ccchhhHHHHHHHHHHhhHHHhhhhhhhcc--cCCCCCCCeEEEEechhhHHHhHHHHHHHHH
Q 002398 747 VIISSETPESKT-----LEKSEDKSAAAAALKASVLHQLIRGKELLD--SSNESLGPLALIIDGKSLTYALEDDVKDLFL 819 (928)
Q Consensus 747 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~ 819 (928)
+.......+... +...+...+. .. ..+......... .+.-....+.+.++|+.+..++ .+..+.+.
T Consensus 752 ~~~~~~~~~~~~~~~i~w~~ve~~~~~---~~---~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~ 824 (1140)
T KOG0208|consen 752 IIPELEPPEDDSIAQIVWLCVESQTQF---LD---PKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVP 824 (1140)
T ss_pred EEEeccCCccCCCceeEEEEccCcccc---CC---CCccCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHH
Confidence 765544211111 0000000000 00 000000000000 0111345689999999999888 56677777
Q ss_pred HHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--c
Q 002398 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--L 897 (928)
Q Consensus 820 ~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l 897 (928)
++..++. |||||+|.||.++|..+|+ .|+.|+|||||+||+.||++|||||+++.+| |..+|.|.-.-++. .
T Consensus 825 ~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cV 898 (1140)
T KOG0208|consen 825 KILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCV 898 (1140)
T ss_pred HHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhH
Confidence 7777776 9999999999999999998 8999999999999999999999999998887 78899999885444 5
Q ss_pred chhhhcchhhhHHHhhhhhee
Q 002398 898 ERLLLVHGHWCYRRISSMVCF 918 (928)
Q Consensus 898 ~~lll~~gr~~~~~i~~~i~~ 918 (928)
..+ +.+||..+-.--..+.|
T Consensus 899 p~v-IrEGRaALVTSf~~FkY 918 (1140)
T KOG0208|consen 899 PDV-IREGRAALVTSFACFKY 918 (1140)
T ss_pred hHH-HhhhhhhhhhhHHHHHH
Confidence 555 99999876544444433
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-76 Score=682.12 Aligned_cols=531 Identities=19% Similarity=0.229 Sum_probs=409.4
Q ss_pred HHhhhHHHHHHHHHHHhccc-CCCC-----CC--cccch---hhhhHhhhhhhHHHHHHHHHHhhhHHHh---cc-eEE-
Q 002398 78 QFRRVANVYFLICAILSFTP-LSPY-----SA--VSNVL---PLVVVIGATMGKEVLEDWRRKKQDIEVN---NR-KVK- 141 (928)
Q Consensus 78 qf~~~~n~~~l~~~il~~~~-~~~~-----~~--~~~~~---~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~-~~~- 141 (928)
+|++|..+.++++++++++. ..+. +| +..+. .+++.++++.+.|.+.++|.+++.+.+. +. +++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~ 108 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARR 108 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 67889999999999999864 1111 11 11222 2222233344444444666666554444 33 576
Q ss_pred EEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccC
Q 002398 142 VHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNF 221 (928)
Q Consensus 142 v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 221 (928)
|. |||++++|+.++|+|||+|.|++||.|||||+|++|+ +.||||+|||||.|+.|.++...
T Consensus 109 v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~d~------------ 170 (673)
T PRK14010 109 IK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-----ATVDESAITGESAPVIKESGGDF------------ 170 (673)
T ss_pred EE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-----eEEecchhcCCCCceeccCCCcc------------
Confidence 56 8999999999999999999999999999999999997 79999999999999999987211
Q ss_pred cEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcce---eeccCCCCCcccHHHHH
Q 002398 222 KAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERR 298 (928)
Q Consensus 222 ~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~l~~~ 298 (928)
...|+||.+.+|. +.++|+.||.+|.+ ....+.++.+++|+|..
T Consensus 171 ------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~ 217 (673)
T PRK14010 171 ------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIA 217 (673)
T ss_pred ------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHHH
Confidence 0237788777766 99999999999954 44566677778999977
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceeh
Q 002398 299 MDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYV 378 (928)
Q Consensus 299 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v 378 (928)
+..+...+.. +++++ +++.++... |. .+...+...+.+++++||++|+.
T Consensus 218 l~~l~~~l~i--i~l~~---~~~~~~~~~----------~~----------------~~~~~~~~~val~V~~IP~aL~~ 266 (673)
T PRK14010 218 LFTLLMTLTI--IFLVV---ILTMYPLAK----------FL----------------NFNLSIAMLIALAVCLIPTTIGG 266 (673)
T ss_pred HHHHHHHHhH--HHHHH---HHHHHHHHh----------hc----------------cHHHHHHHHHHHHHHhhhhhHHH
Confidence 6655433322 11111 111111000 00 01114556677777889999999
Q ss_pred hHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHH
Q 002398 379 SIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERA 458 (928)
Q Consensus 379 ~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~ 458 (928)
.++++...++.++ +++++++|+...+|.||.+++||||||||||+|++.+..+.....
T Consensus 267 ~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------------ 324 (673)
T PRK14010 267 LLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS------------ 324 (673)
T ss_pred HHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC------------
Confidence 9999888888888 899999999999999999999999999999998877665431100
Q ss_pred HHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccH
Q 002398 459 MARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 538 (928)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e 538 (928)
...++++...++|+.. +.||.+
T Consensus 325 --------------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~ 346 (673)
T PRK14010 325 --------------------------------------------SSFERLVKAAYESSIA--------------DDTPEG 346 (673)
T ss_pred --------------------------------------------ccHHHHHHHHHHhcCC--------------CCChHH
Confidence 0112345556666532 249999
Q ss_pred HHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHH
Q 002398 539 AAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERL 618 (928)
Q Consensus 539 ~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~ 618 (928)
.|+++++++.|+.... .....+||++++|+|++.+. ++ .+.|||++.++++|
T Consensus 347 ~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~ 398 (673)
T PRK14010 347 RSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRV 398 (673)
T ss_pred HHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHh
Confidence 9999999987653210 00123799999999999753 33 45599999999999
Q ss_pred hhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeecc
Q 002398 619 AENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 698 (928)
Q Consensus 619 ~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~ 698 (928)
...+...+.++.+..++++++|+|+++++ .|++++|+++++
T Consensus 399 ~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~~~~~lG~i~l~ 439 (673)
T PRK14010 399 KEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------------------------------EDNEILGVIYLK 439 (673)
T ss_pred hhcCCCCchHHHHHHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEee
Confidence 86543444556777788999999999987 578999999999
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
|++|++++++|++||++||+++|+|||+..||.++|+++||..
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------------------------- 482 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------------------------- 482 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------------
Confidence 9999999999999999999999999999999999999999952
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcC
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGD 858 (928)
+++|++|+||.++|+.+|+ .|+.|+|+||
T Consensus 483 --------------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGD 511 (673)
T PRK14010 483 --------------------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGD 511 (673)
T ss_pred --------------------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECC
Confidence 8999999999999999998 8999999999
Q ss_pred CccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 859 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 859 G~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
|.||+|+|++|||||||+ +..+.|+++||++++++++ |..+ +.+||..|.|+++++.|++..|++.+
T Consensus 512 GvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~ 580 (673)
T PRK14010 512 GTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKY 580 (673)
T ss_pred ChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHH
Confidence 999999999999999994 4445599999999998777 8888 99999999999999999999998753
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-78 Score=671.36 Aligned_cols=685 Identities=21% Similarity=0.256 Sum_probs=532.8
Q ss_pred hcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc--CCC-------CCCcccchhhhhHhhhhhhH
Q 002398 50 ASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LSP-------YSAVSNVLPLVVVIGATMGK 120 (928)
Q Consensus 50 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~~-------~~~~~~~~~l~~vl~~~~i~ 120 (928)
+++.+-|+|..+.+|.+.-+ ..+..|+...+.+.+++.++++++. +.+ -......+.|+.+++++.+-
T Consensus 66 ~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~ 142 (1019)
T KOG0203|consen 66 EKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLF 142 (1019)
T ss_pred hhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecC
Confidence 46788999999999977743 6688999999999999999999875 211 11233455566777777777
Q ss_pred HHHHHHHHHhh---hHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCC
Q 002398 121 EVLEDWRRKKQ---DIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGE 197 (928)
Q Consensus 121 ~~~~d~~r~k~---~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGE 197 (928)
.++++.+..+- .+.+-++.++|+ |||....+...+|+|||+|.++-|++||||++++++.+ |+||+|+||||
T Consensus 143 ~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGe 217 (1019)
T KOG0203|consen 143 SYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGE 217 (1019)
T ss_pred CCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccc
Confidence 77766665443 445558899999 99999999999999999999999999999999999998 99999999999
Q ss_pred CcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecC
Q 002398 198 TNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGR 277 (928)
Q Consensus 198 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~ 277 (928)
+.|..+.+...-.+.. |..| ..|.+|..++|. ++|+|++||.
T Consensus 218 sEP~~~~~~~t~~~~~--------------Et~N---i~f~st~~veG~---------------------~~givi~tGd 259 (1019)
T KOG0203|consen 218 SEPQTRSPEFTHENPL--------------ETRN---IAFFSTNCVEGT---------------------GRGIVIATGD 259 (1019)
T ss_pred cCCccCCccccccCch--------------hhee---eeeeeeEEecce---------------------EEEEEEecCC
Confidence 9999887754321100 1111 225666666655 9999999999
Q ss_pred CcceeeccC---CCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhH
Q 002398 278 DTKVFQNST---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAA 354 (928)
Q Consensus 278 ~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 354 (928)
+|.+++... .....++++++.+++++.++..+.+++.+..+++...... .|
T Consensus 260 ~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy---------~~----------------- 313 (1019)
T KOG0203|consen 260 RTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY---------EW----------------- 313 (1019)
T ss_pred ceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc---------hh-----------------
Confidence 998866543 4466789999999999999988888888777766554421 22
Q ss_pred HHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCccccc
Q 002398 355 VAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCN 434 (928)
Q Consensus 355 ~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n 434 (928)
+..+...+.+++..+|.+|+++++....+-+.+| +++++++|++.+.|.||...+||+|||||||+|
T Consensus 314 ---l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqn 380 (1019)
T KOG0203|consen 314 ---LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 380 (1019)
T ss_pred ---HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEec
Confidence 2345558888999999999999999999999988 899999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhh
Q 002398 435 SMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAI 514 (928)
Q Consensus 435 ~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 514 (928)
.|+|.++|.++.....+..+ ..+ + ......+.....+.++..+
T Consensus 381 rMtVahlw~d~~i~~~d~~~------~~~-------------------~------------~~~~~~~~~~~~l~r~~~l 423 (1019)
T KOG0203|consen 381 RMTVAHLWFDNQIHEADTTE------DQS-------------------G------------QSFDKSSATFIALSRIATL 423 (1019)
T ss_pred ceEEEeeccCCceeeeechh------hhh-------------------c------------ccccccCchHHHHHHHHHH
Confidence 99999999887654332211 000 0 0001124456788999999
Q ss_pred cceeeccccCCC--CceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceE
Q 002398 515 CHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (928)
Q Consensus 515 c~~~~~~~~~~~--~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (928)
||.+.....+.. -.-.-..+++.|.||++++.-.-... ...++.++.+..+||+|.+|..
T Consensus 424 Cn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~------------------~~~R~~~~kv~eipfNSt~Kyq 485 (1019)
T KOG0203|consen 424 CNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV------------------MELRERNPKVAEIPFNSTNKYQ 485 (1019)
T ss_pred hCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH------------------HHHHHhhHHhhcCCcccccceE
Confidence 999977643321 12223458999999999987532111 1124678889999999999999
Q ss_pred EEEEEeCC---CeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHH
Q 002398 593 SVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFN 660 (928)
Q Consensus 593 sviv~~~~---g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~ 660 (928)
-.+.+..+ .++.+.+|||||.++++|+.. ++...+.+.+...++...|-||+.+|++.+++++|.+..
T Consensus 486 lsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~ 565 (1019)
T KOG0203|consen 486 LSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGF 565 (1019)
T ss_pred EEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCce
Confidence 99988754 578999999999999999753 345677788888899999999999999999988775432
Q ss_pred HHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 661 EEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 661 ~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
+..-... +.--.++.|+|++++-||+|..+|+++.+||.|||||.|+|||++.||.++|++.||+
T Consensus 566 ~f~~d~~---------------n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi 630 (1019)
T KOG0203|consen 566 QFDTDDV---------------NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGII 630 (1019)
T ss_pred EeecCCC---------------CCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeee
Confidence 2111100 1122689999999999999999999999999999999999999999999999999998
Q ss_pred cCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHH
Q 002398 741 RQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLE 820 (928)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~ 820 (928)
..+.....- + ....... ...-++....+.++.|.+|...-++ ++.+
T Consensus 631 ~~~~et~e~------------------~--------a~r~~~~----v~~vn~~~a~a~VihG~eL~~~~~~----qld~ 676 (1019)
T KOG0203|consen 631 SEGSETVED------------------I--------AKRLNIP----VEQVNSRDAKAAVIHGSELPDMSSE----QLDE 676 (1019)
T ss_pred cCCchhhhh------------------h--------HHhcCCc----ccccCccccceEEEecccccccCHH----HHHH
Confidence 765432110 0 0000000 0011223357889999999866554 4444
Q ss_pred HhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEE--cCcchhhHhHhcceecccccc--
Q 002398 821 LAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRF-- 896 (928)
Q Consensus 821 ~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~--~g~~~~~a~~~aD~vi~~f~~-- 896 (928)
+..+....||||+||+||..||+..|+ .|.+|+.+|||.||+|||+.||||||| +|++. +|++||+++++++|
T Consensus 677 il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFAS 753 (1019)
T KOG0203|consen 677 LLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFAS 753 (1019)
T ss_pred HHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchh
Confidence 555566789999999999999999998 999999999999999999999999998 45555 99999999999888
Q ss_pred cchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 897 LERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 897 l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
++-- +.+||.+|+|++|.|.|.+..|++.|
T Consensus 754 IVtG-VEEGRLiFDNLKKsIAYTLTsNipEI 783 (1019)
T KOG0203|consen 754 IVTG-VEEGRLIFDNLKKSIAYTLTSNIPEI 783 (1019)
T ss_pred heee-cccceehhhhHHHHHHHHHHhcchhH
Confidence 7777 89999999999999999999999876
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-75 Score=675.27 Aligned_cols=528 Identities=20% Similarity=0.225 Sum_probs=417.6
Q ss_pred HHHhhhHHHHHHHHHHHhccc-CCC------CCC---cccchhhhhHhhhhhhHHHHHHHHHHhhhHHHh---cc-eEEE
Q 002398 77 EQFRRVANVYFLICAILSFTP-LSP------YSA---VSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVN---NR-KVKV 142 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~-~~~------~~~---~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~-~~~v 142 (928)
.||++|..+.++++++++++. +.+ ..+ +...+.+++.++++.+.|.+.++|.+++.+.+. +. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 488999999999999999874 111 011 112234445555666667788888777665554 33 6999
Q ss_pred EeCCCe-EEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccC
Q 002398 143 HCGEGA-FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNF 221 (928)
Q Consensus 143 ~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 221 (928)
+ |+|. +++|+.++|++||+|.|++||.|||||+|++|. +.||||.|||||.|+.|.+++..
T Consensus 109 i-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-----a~VDESaLTGES~PV~K~~G~~~------------ 170 (679)
T PRK01122 109 L-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-----ASVDESAITGESAPVIRESGGDF------------ 170 (679)
T ss_pred E-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-----EEEEcccccCCCCceEeCCCCcc------------
Confidence 9 8887 999999999999999999999999999999997 89999999999999999987531
Q ss_pred cEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcce---eeccCCCCCcccHHHHH
Q 002398 222 KAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERR 298 (928)
Q Consensus 222 ~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~l~~~ 298 (928)
...|+||.+++|. +.+.|+.+|.+|.+ ....+.++.+++|+|..
T Consensus 171 ------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~a 217 (679)
T PRK01122 171 ------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEIA 217 (679)
T ss_pred ------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHHH
Confidence 1248888888766 99999999999954 44556666778999998
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceeh
Q 002398 299 MDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYV 378 (928)
Q Consensus 299 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v 378 (928)
++.+...++.+.++++++.+.++ ++.. . . ..+...+.+++++||++|+.
T Consensus 218 l~~l~~~l~~i~l~~~~~~~~~~-~~~g-~-------~----------------------~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 218 LTILLAGLTIIFLLVVATLPPFA-AYSG-G-------A----------------------LSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-HHhC-c-------h----------------------HHHHHHHHHHHHcccchhhh
Confidence 88876665544443333322211 1110 0 0 14666788899999999988
Q ss_pred hHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHH
Q 002398 379 SIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERA 458 (928)
Q Consensus 379 ~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~ 458 (928)
.++.+...++.++ .++++++|+...+|.||++++||||||||||+|+|.+..++..+..
T Consensus 267 l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~----------- 325 (679)
T PRK01122 267 LLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV----------- 325 (679)
T ss_pred HHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-----------
Confidence 8888888888877 8999999999999999999999999999999999999887532110
Q ss_pred HHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccH
Q 002398 459 MARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 538 (928)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e 538 (928)
..++++.+.++|+.. +.||..
T Consensus 326 ---------------------------------------------~~~~ll~~a~~~s~~--------------s~hP~~ 346 (679)
T PRK01122 326 ---------------------------------------------TEEELADAAQLSSLA--------------DETPEG 346 (679)
T ss_pred ---------------------------------------------CHHHHHHHHHHhcCC--------------CCCchH
Confidence 001345556666433 248999
Q ss_pred HHHHHHHHH-CCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHH
Q 002398 539 AAFVIAARE-LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER 617 (928)
Q Consensus 539 ~alv~~a~~-~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~ 617 (928)
.|++++++. .++... ...+...+.+||++.+++|++.+. | ..|.|||++.|+++
T Consensus 347 ~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~ 401 (679)
T PRK01122 347 RSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRY 401 (679)
T ss_pred HHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHH
Confidence 999999986 343211 012445667899999988887652 4 47899999999999
Q ss_pred HhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeec
Q 002398 618 LAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 697 (928)
Q Consensus 618 ~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i 697 (928)
|...+...++++.+.+++++++|+|++++| .|++++|++++
T Consensus 402 ~~~~g~~~~~~~~~~~~~~a~~G~~~l~va---------------------------------------~~~~~lG~i~l 442 (679)
T PRK01122 402 VESNGGHFPAELDAAVDEVARKGGTPLVVA---------------------------------------EDNRVLGVIYL 442 (679)
T ss_pred HHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------------------------------ECCeEEEEEEE
Confidence 976555566778888899999999999999 57889999999
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
+|++|++++++|++||++||+++|+|||++.||.++|+++||.+
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------------------------ 486 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------------ 486 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------------------------------------
Confidence 99999999999999999999999999999999999999999942
Q ss_pred HHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEc
Q 002398 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iG 857 (928)
+++|++|+||..+|+.+|+ .|+.|+|+|
T Consensus 487 ---------------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtG 514 (679)
T PRK01122 487 ---------------------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTG 514 (679)
T ss_pred ---------------------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEEC
Confidence 8999999999999999998 899999999
Q ss_pred CCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHhhhhheeee
Q 002398 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMVCFTL 920 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i~~~i~~~~ 920 (928)
||.||+|||++|||||||. +..+.|+++||++++++++ |..+ +.+||...-.-..+-.|++
T Consensus 515 DGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~ 577 (679)
T PRK01122 515 DGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSI 577 (679)
T ss_pred CCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhH
Confidence 9999999999999999994 4445599999999998776 8888 8999998754444444443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-71 Score=647.16 Aligned_cols=535 Identities=19% Similarity=0.242 Sum_probs=420.8
Q ss_pred HHHhhhHHHHHHHHHHHhccc-CCC-------C--CCcccc--hhhhhHhhhhhhHHHHHHHHHHhhhHHHh---cc-eE
Q 002398 77 EQFRRVANVYFLICAILSFTP-LSP-------Y--SAVSNV--LPLVVVIGATMGKEVLEDWRRKKQDIEVN---NR-KV 140 (928)
Q Consensus 77 ~qf~~~~n~~~l~~~il~~~~-~~~-------~--~~~~~~--~~l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~-~~ 140 (928)
.||++|..+.++++++++++. +.+ . .|+... +.+++.+++..+.+.+.++|.+++.+.+. +. .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 488999999999999998764 211 1 133222 23344456666778888888888766665 33 47
Q ss_pred EEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecccccccCCCCcccccc
Q 002398 141 KVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQN 220 (928)
Q Consensus 141 ~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 220 (928)
+|+++||++++|+.++|+|||+|.|++||.|||||+|++|+ +.||||+|||||.|+.|.+++...
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~~~~---------- 172 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-----ASVDESAITGESAPVIKESGGDFA---------- 172 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-----EEEEcccccCCCCceeecCCCCcc----------
Confidence 88834899999999999999999999999999999999997 899999999999999999875320
Q ss_pred CcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcce---eeccCCCCCcccHHHH
Q 002398 221 FKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVER 297 (928)
Q Consensus 221 ~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~l~~ 297 (928)
..|+||.+.+|. +.+.|+.+|.+|.+ ......++.+++|+|.
T Consensus 173 --------------~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~ 217 (675)
T TIGR01497 173 --------------SVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNEI 217 (675)
T ss_pred --------------eeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHHH
Confidence 137777777665 99999999999954 4455666777899998
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhcccccee
Q 002398 298 RMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLY 377 (928)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~ 377 (928)
.++.+..++.++.+++++ .+|.+..... . ...+...+.+++++||++|+
T Consensus 218 ~l~~l~~~l~~v~li~~~---~~~~~~~~~~--------------------------~--~~~~~~lvallV~aiP~aLg 266 (675)
T TIGR01497 218 ALTILLIALTLVFLLVTA---TLWPFAAYGG--------------------------N--AISVTVLVALLVCLIPTTIG 266 (675)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHhcC--------------------------h--hHHHHHHHHHHHHhCchhhh
Confidence 888776555433333222 2222110000 0 01345567889999999887
Q ss_pred hhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHH
Q 002398 378 VSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVER 457 (928)
Q Consensus 378 v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~ 457 (928)
...+.+...++.++ .++++++|+...+|.||++|+||||||||||+|+|.+..++..+..
T Consensus 267 ~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------- 326 (675)
T TIGR01497 267 GLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------- 326 (675)
T ss_pred hHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC----------
Confidence 66666666677777 8899999999999999999999999999999999999887632110
Q ss_pred HHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCcc
Q 002398 458 AMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 537 (928)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~ 537 (928)
..++++...++|+.. +.||.
T Consensus 327 ----------------------------------------------~~~~ll~~aa~~~~~--------------s~hP~ 346 (675)
T TIGR01497 327 ----------------------------------------------DEKTLADAAQLASLA--------------DDTPE 346 (675)
T ss_pred ----------------------------------------------cHHHHHHHHHHhcCC--------------CCCcH
Confidence 011445556666432 35899
Q ss_pred HHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHH
Q 002398 538 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER 617 (928)
Q Consensus 538 e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~ 617 (928)
+.|++++|++.|..... ..+......||++.+++|++.+. +| ..|.||+++.++++
T Consensus 347 a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~ 402 (675)
T TIGR01497 347 GKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRH 402 (675)
T ss_pred HHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHH
Confidence 99999999987653211 12234567899999877776543 34 47899999999999
Q ss_pred HhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeec
Q 002398 618 LAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 697 (928)
Q Consensus 618 ~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i 697 (928)
|...+...+.++.+.+++++++|+|++++| .|.+++|++++
T Consensus 403 ~~~~g~~~~~~~~~~~~~~a~~G~r~l~va---------------------------------------~~~~~lG~i~l 443 (675)
T TIGR01497 403 VEANGGHIPTDLDQAVDQVARQGGTPLVVC---------------------------------------EDNRIYGVIYL 443 (675)
T ss_pred HHhcCCCCcHHHHHHHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEe
Confidence 876554556677888899999999999999 45689999999
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
+|++|++++++|++||++||+++|+|||+..+|.++|+++|+.+
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------------------------------ 487 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------------------------------ 487 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE------------------------------------
Confidence 99999999999999999999999999999999999999999942
Q ss_pred HHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEc
Q 002398 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iG 857 (928)
+++|++|++|..+|+.+|+ .++.|+|+|
T Consensus 488 ---------------------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvG 515 (675)
T TIGR01497 488 ---------------------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTG 515 (675)
T ss_pred ---------------------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEEC
Confidence 8899999999999999998 788999999
Q ss_pred CCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHhhhhheeeeecccc
Q 002398 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMVCFTLKMLID 925 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i~~~i~~~~~~n~~ 925 (928)
||.||+|||++|||||+|. +..+.|+++||++++++++ +..+ +.+||..+-+...+..|++..+++
T Consensus 516 DG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 516 DGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred CCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHH
Confidence 9999999999999999994 4445599999999998776 8888 899999999999999999877654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-72 Score=620.03 Aligned_cols=636 Identities=20% Similarity=0.266 Sum_probs=457.6
Q ss_pred cCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHHHHhh-
Q 002398 53 LNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQ- 131 (928)
Q Consensus 53 ~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~- 131 (928)
.+||+|......+++- ..+.|.-..|+.+|+.++..||+.- ..||.+++.|++++.+-+. --++|.+.
T Consensus 174 ~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~fE~t----lV~Qrm~~l 242 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAFEAT----LVKQRMRTL 242 (1160)
T ss_pred HHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 4599999999999887 7888888999999999999999973 3466666666666554333 23444444
Q ss_pred --hHHHh--cceEEEEeCCCeEEEEecccCccccEEEecc---CCcCCccEEEEeecCCCceEEEEecCCCCCCcceeec
Q 002398 132 --DIEVN--NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEK---DEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (928)
Q Consensus 132 --~~~~n--~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~---ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~ 204 (928)
.+.+. +..+.|+ |+++|+.+...+|.|||+|.+.. ...+|||++||.|+ |.|||++|||||.|..|.
T Consensus 243 se~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-----ciVnEaMLtGESvPl~KE 316 (1160)
T KOG0209|consen 243 SEFRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-----CIVNEAMLTGESVPLMKE 316 (1160)
T ss_pred HHHHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-----eeechhhhcCCCcccccc
Confidence 44443 5678999 99999999999999999999987 67899999999999 999999999999999999
Q ss_pred ccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceee-cCCeEEEEEEEecCCcceee
Q 002398 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLR-NTDCIYGAVIFTGRDTKVFQ 283 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~-~t~~~~g~Vv~tG~~Tk~~~ 283 (928)
++..... + ..+..+...+....|.||.+++-..- .-+.++ ..|-+.+.|++||.+|.-+.
T Consensus 317 ~Ie~~~~----d------~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 317 SIELRDS----D------DILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ccccCCh----h------hhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCCc
Confidence 9875431 1 11223334455677889888753210 001111 13668999999999994332
Q ss_pred ccC---CCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHH
Q 002398 284 NST---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLH 360 (928)
Q Consensus 284 ~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 360 (928)
..+ -...+-+.- |+-+.+++++++++|++.+ ||.+..++. ++.+ +-...
T Consensus 378 LvRtilf~aervTaN----n~Etf~FILFLlVFAiaAa------------------~Yvwv~Gsk---d~~R---srYKL 429 (1160)
T KOG0209|consen 378 LVRTILFSAERVTAN----NRETFIFILFLLVFAIAAA------------------GYVWVEGSK---DPTR---SRYKL 429 (1160)
T ss_pred eeeeEEecceeeeec----cHHHHHHHHHHHHHHHHhh------------------heEEEeccc---Ccch---hhhhe
Confidence 222 111111111 2223344444555555442 222111110 0111 11225
Q ss_pred HHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEE
Q 002398 361 FLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK 440 (928)
Q Consensus 361 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 440 (928)
|+-+..++...+|.-||.-++++...+...+ ++.++.|..+-.+.-.|+||..|||||||||+..|.|.+
T Consensus 430 ~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~G 499 (1160)
T KOG0209|consen 430 FLECTLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEG 499 (1160)
T ss_pred eeeeeEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEe
Confidence 7778889999999999998888877666666 789999999999999999999999999999999999998
Q ss_pred EEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeec
Q 002398 441 CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALP 520 (928)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~ 520 (928)
+.-....-+. .. +-.+.-.+-..+++.||+...
T Consensus 500 vag~~~~~~~-~~----------------------------------------------~~s~~p~~t~~vlAscHsLv~ 532 (1160)
T KOG0209|consen 500 VAGLSADEGA-LT----------------------------------------------PASKAPNETVLVLASCHSLVL 532 (1160)
T ss_pred cccccCCccc-cc----------------------------------------------chhhCCchHHHHHHHHHHHHH
Confidence 7421110000 00 001111246789999999877
Q ss_pred cccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCC
Q 002398 521 EVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE 600 (928)
Q Consensus 521 ~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~ 600 (928)
..++ ..|+|.|+|.+++ .||.+...+. ..- .++.....+|.+++.|+|..||||||+...+
T Consensus 533 le~~-------lVGDPlEKA~l~~---v~W~~~k~~~--v~p-------~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~ 593 (1160)
T KOG0209|consen 533 LEDK-------LVGDPLEKATLEA---VGWNLEKKNS--VCP-------REGNGKKLKIIQRYHFSSALKRMSVVASHQG 593 (1160)
T ss_pred hcCc-------ccCChHHHHHHHh---cCcccccCcc--cCC-------CcCCCcccchhhhhhHHHHHHHHHhhhhccc
Confidence 6543 3689999999875 5665543211 000 0111236788999999999999999998753
Q ss_pred ----CeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHH
Q 002398 601 ----GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREE 676 (928)
Q Consensus 601 ----g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~ 676 (928)
-+++..+|||||+|.+++. +++.++.+...+|+++|.|||+++||.+.+-- .++
T Consensus 594 ~g~s~k~~~aVKGAPEvi~~ml~----dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~------------------~~q 651 (1160)
T KOG0209|consen 594 PGSSEKYFVAVKGAPEVIQEMLR----DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMM------------------VSQ 651 (1160)
T ss_pred CCCceEEEEEecCCHHHHHHHHH----hCchhHHHHHHHHhhccceEEEEecccccccc------------------hhh
Confidence 3689999999999999987 45678888889999999999999999987311 111
Q ss_pred HHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCcc
Q 002398 677 LAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES 756 (928)
Q Consensus 677 ~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 756 (928)
.-+..++.+|+||+|.|++.|..|||++++++|+.|.+++++++|+|||++.||.++|+++||+.....++.+.++..+.
T Consensus 652 ~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~ 731 (1160)
T KOG0209|consen 652 VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGN 731 (1160)
T ss_pred hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCc
Confidence 11234578999999999999999999999999999999999999999999999999999999998877666665543221
Q ss_pred ccccchhhHHHHHHHHHHhhHHHhhhhhhhcc----cCCC---CCCCeEEEEechhhHHHhHHH-HHHHHHHHhhcCCeE
Q 002398 757 KTLEKSEDKSAAAAALKASVLHQLIRGKELLD----SSNE---SLGPLALIIDGKSLTYALEDD-VKDLFLELAIGCASV 828 (928)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~lvi~g~~l~~~l~~~-~~~~~~~~~~~~~~~ 828 (928)
..... +.+..+. .... -...+.++++|..++.+...+ +.+.+. .+.
T Consensus 732 ~~~w~--------------------s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~------hv~ 785 (1160)
T KOG0209|consen 732 QLEWV--------------------SVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIP------HVW 785 (1160)
T ss_pred eeeEe--------------------cCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhh------hee
Confidence 11000 0000000 0000 113456899999999888765 333333 345
Q ss_pred EEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcC
Q 002398 829 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG 877 (928)
Q Consensus 829 v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g 877 (928)
||||+.|+||..++..+|+ .|+.|+|||||.||++||++||||||+-+
T Consensus 786 VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 786 VFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred EEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhcccceehhc
Confidence 9999999999999999998 99999999999999999999999999844
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-68 Score=617.95 Aligned_cols=485 Identities=22% Similarity=0.302 Sum_probs=396.0
Q ss_pred hhhhhhHHHHHHHHHHhhhHH------HhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceE
Q 002398 114 IGATMGKEVLEDWRRKKQDIE------VNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC 187 (928)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~~~------~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~ 187 (928)
+++-.+-+++|++-+.|+.+. +.+++++++.+||++++|+.++|++||+|.|++||+||+||+|++|+ .
T Consensus 181 i~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~-----s 255 (713)
T COG2217 181 IFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS-----S 255 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc-----E
Confidence 333344466666666665333 34789988845666999999999999999999999999999999999 6
Q ss_pred EEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCe
Q 002398 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDC 267 (928)
Q Consensus 188 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~ 267 (928)
.||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 256 ~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~--------------------- 287 (713)
T COG2217 256 SVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS--------------------- 287 (713)
T ss_pred EeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc---------------------
Confidence 8999999999999999999987 9999999887
Q ss_pred EEEEEEEecCCcc---eeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCC
Q 002398 268 IYGAVIFTGRDTK---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDT 344 (928)
Q Consensus 268 ~~g~Vv~tG~~Tk---~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~ 344 (928)
+...|..+|.||. +.+....++.+++++|+..|+++.++.+..++++++++++|.++... +|.
T Consensus 288 l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~~------ 353 (713)
T COG2217 288 LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DWE------ 353 (713)
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cHH------
Confidence 8999999999995 45666788899999999999999999999999999998876654421 221
Q ss_pred CCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEE
Q 002398 345 TAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424 (928)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~ 424 (928)
..+.+++.+++..|||+|.++.+++...+.... +++|+++|+.+.+|.|+++|+++
T Consensus 354 --------------~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 354 --------------TALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred --------------HHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEE
Confidence 268899999999999999999999999888877 89999999999999999999999
Q ss_pred ecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHH
Q 002398 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 504 (928)
Q Consensus 425 ~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (928)
||||||||+|+|++..+...+. +..
T Consensus 410 FDKTGTLT~G~p~v~~v~~~~~----~e~--------------------------------------------------- 434 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVVALDG----DED--------------------------------------------------- 434 (713)
T ss_pred EeCCCCCcCCceEEEEEecCCC----CHH---------------------------------------------------
Confidence 9999999999999998865432 000
Q ss_pred HHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeec
Q 002398 505 IQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLE 584 (928)
Q Consensus 505 ~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~ 584 (928)
+++...+. .+-.++||..+|++++|+..|..... .....+|.|+...+
T Consensus 435 --~~L~laAa--------------lE~~S~HPiA~AIv~~a~~~~~~~~~---------~~~~i~G~Gv~~~v------- 482 (713)
T COG2217 435 --ELLALAAA--------------LEQHSEHPLAKAIVKAAAERGLPDVE---------DFEEIPGRGVEAEV------- 482 (713)
T ss_pred --HHHHHHHH--------------HHhcCCChHHHHHHHHHHhcCCCCcc---------ceeeeccCcEEEEE-------
Confidence 12222221 12236799999999999987621111 12222355555544
Q ss_pred ccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHH
Q 002398 585 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664 (928)
Q Consensus 585 F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~ 664 (928)
+|+.++ -|.+.-+.+. +..... .....+.+..+|..++.++
T Consensus 483 ---------------~g~~v~--vG~~~~~~~~----~~~~~~-~~~~~~~~~~~G~t~v~va----------------- 523 (713)
T COG2217 483 ---------------DGERVL--VGNARLLGEE----GIDLPL-LSERIEALESEGKTVVFVA----------------- 523 (713)
T ss_pred ---------------CCEEEE--EcCHHHHhhc----CCCccc-hhhhHHHHHhcCCeEEEEE-----------------
Confidence 454333 3666554321 111111 4566778888999988888
Q ss_pred HHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCc
Q 002398 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (928)
Q Consensus 665 ~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (928)
.|.+++|+++++|++|++++++|++||+.||++.|+|||+..+|..+|+++||.+
T Consensus 524 ----------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~--- 578 (713)
T COG2217 524 ----------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE--- 578 (713)
T ss_pred ----------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---
Confidence 6779999999999999999999999999999999999999999999999999942
Q ss_pred eEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhc
Q 002398 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (928)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~ 824 (928)
T Consensus 579 -------------------------------------------------------------------------------- 578 (713)
T COG2217 579 -------------------------------------------------------------------------------- 578 (713)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhh
Q 002398 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLL 902 (928)
Q Consensus 825 ~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll 902 (928)
+++.+.|++|.++|+.+|+ .|++|+|+|||.||+|+|..|||||+|+. ..+.|+++||+++++.+. +..+ +
T Consensus 579 ----v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~dL~~v~~a-i 651 (713)
T COG2217 579 ----VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEA-I 651 (713)
T ss_pred ----heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecCCHHHHHHH-H
Confidence 8899999999999999997 78999999999999999999999999943 344499999999998666 7777 8
Q ss_pred cchhhhHHHhhhhheeeeecccccc
Q 002398 903 VHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 903 ~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
..+|..+++|+.++.|+|.+|+.+|
T Consensus 652 ~lsr~t~~~IkqNl~~A~~yn~~~i 676 (713)
T COG2217 652 DLSRATRRIIKQNLFWAFGYNAIAI 676 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998876
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-67 Score=614.31 Aligned_cols=468 Identities=33% Similarity=0.468 Sum_probs=387.5
Q ss_pred hhhhhHhhhhhhHHHHHHHHHHhhhHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceE
Q 002398 108 LPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC 187 (928)
Q Consensus 108 ~~l~~vl~~~~i~~~~~d~~r~k~~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~ 187 (928)
+++++.++....+...++..+...++.+++++++|+ |+| ++.|++++|+|||+|.+++||.|||||+|++|+ |
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-----~ 77 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-----C 77 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-----E
Confidence 334444444444444444444444445778899999 999 999999999999999999999999999999997 9
Q ss_pred EEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCe
Q 002398 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDC 267 (928)
Q Consensus 188 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~ 267 (928)
.||||+|||||.|+.|.+++.+ |+|+.+.+|.
T Consensus 78 ~vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~--------------------- 109 (499)
T TIGR01494 78 FVDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT--------------------- 109 (499)
T ss_pred EEEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE---------------------
Confidence 9999999999999999987654 7788888777
Q ss_pred EEEEEEEecCCcce---eeccCCCCCcccHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCC
Q 002398 268 IYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKII-YFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDD 343 (928)
Q Consensus 268 ~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~ 343 (928)
+.+.|..+|.+|.. ..........++++++..+++. .++++++++++++.+++|..+.... .
T Consensus 110 ~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~------~-------- 175 (499)
T TIGR01494 110 LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP------N-------- 175 (499)
T ss_pred EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc------c--------
Confidence 77899999999843 3333344455788999999998 7777777777777776664332100 0
Q ss_pred CCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEE
Q 002398 344 TTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTI 423 (928)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i 423 (928)
.+...+.+++.+++.+|||+|+++++++...+..++ .++++++|+++.+|+||+++++
T Consensus 176 ------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i 233 (499)
T TIGR01494 176 ------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYI 233 (499)
T ss_pred ------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEE
Confidence 123378899999999999999999999999998877 7889999999999999999999
Q ss_pred EecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChH
Q 002398 424 LSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHAD 503 (928)
Q Consensus 424 ~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (928)
|||||||||+|+|+|.++++.+..
T Consensus 234 ~fDKTGTLT~~~~~v~~~~~~~~~-------------------------------------------------------- 257 (499)
T TIGR01494 234 CSDKTGTLTKNEMSFKKVSVLGGE-------------------------------------------------------- 257 (499)
T ss_pred EeeCCCccccCceEEEEEEecCCC--------------------------------------------------------
Confidence 999999999999999988653210
Q ss_pred HHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeee
Q 002398 504 VIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVL 583 (928)
Q Consensus 504 ~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~ 583 (928)
+.++||+|.|++++++..+ +...
T Consensus 258 ---------------------------~~s~hp~~~ai~~~~~~~~------------------------------~~~~ 280 (499)
T TIGR01494 258 ---------------------------YLSGHPDERALVKSAKWKI------------------------------LNVF 280 (499)
T ss_pred ---------------------------cCCCChHHHHHHHHhhhcC------------------------------ccee
Confidence 1246999999999886411 1356
Q ss_pred cccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHH
Q 002398 584 EFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEF 663 (928)
Q Consensus 584 ~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~ 663 (928)
||++.+++|+++++.+++ .|+||+++.|.++|.. +.+.++.++.+|+|++++|++
T Consensus 281 ~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g~~~~~~a~~-------------- 335 (499)
T TIGR01494 281 EFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSGLRVLAVASK-------------- 335 (499)
T ss_pred ccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCCCEEEEEEEC--------------
Confidence 999999999999987444 4789999999988752 233455688899999999943
Q ss_pred HHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCC
Q 002398 664 TEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 743 (928)
Q Consensus 664 ~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~ 743 (928)
-+++|+++++|++|++++++|+.|+++|+++||+|||+..+|..+|+++|+
T Consensus 336 -------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---- 386 (499)
T TIGR01494 336 -------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI---- 386 (499)
T ss_pred -------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc----
Confidence 368999999999999999999999999999999999999999999999875
Q ss_pred ceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhh
Q 002398 744 MRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 823 (928)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~ 823 (928)
T Consensus 387 -------------------------------------------------------------------------------- 386 (499)
T TIGR01494 387 -------------------------------------------------------------------------------- 386 (499)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhh
Q 002398 824 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLL 901 (928)
Q Consensus 824 ~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~ll 901 (928)
+++++|+||.++|+.+++ .|+.|+|+|||.||++||++|||||+|. |+.+||+++++++. +..+
T Consensus 387 ------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~- 452 (499)
T TIGR01494 387 ------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDA- 452 (499)
T ss_pred ------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHH-
Confidence 356889999999999987 7899999999999999999999999994 68899999998666 5555
Q ss_pred hcchhhhHHHhhhhheeeeecccccc
Q 002398 902 LVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 902 l~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+.+||+.++++++++.|.+++|+..+
T Consensus 453 ~~~~r~~~~~i~~~~~~~~~~n~~~~ 478 (499)
T TIGR01494 453 LKEGRKTFSTIKSNIFWAIAYNLILI 478 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998754
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-64 Score=601.69 Aligned_cols=478 Identities=21% Similarity=0.233 Sum_probs=382.4
Q ss_pred hhhhHHHHHHHHHHhhhH------HHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEE
Q 002398 116 ATMGKEVLEDWRRKKQDI------EVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYV 189 (928)
Q Consensus 116 ~~~i~~~~~d~~r~k~~~------~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~V 189 (928)
+..+.+++|.+.+.|+.+ .+.+.+++|+ |||++++|++++|+|||+|.|++||.|||||+|++|+ +.|
T Consensus 215 l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~-----~~v 288 (741)
T PRK11033 215 LFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF-----ASF 288 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc-----EEe
Confidence 333445555555555433 2347889999 9999999999999999999999999999999999998 799
Q ss_pred EecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEE
Q 002398 190 ETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIY 269 (928)
Q Consensus 190 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~ 269 (928)
|||.||||+.|+.|.+++.+ |+||++.+|. +.
T Consensus 289 des~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~---------------------~~ 320 (741)
T PRK11033 289 DESALTGESIPVERATGEKV---------------------------PAGATSVDRL---------------------VT 320 (741)
T ss_pred ecccccCCCCCEecCCCCee---------------------------ccCCEEcCce---------------------EE
Confidence 99999999999999998765 8899988877 89
Q ss_pred EEEEEecCCcc---eeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCC
Q 002398 270 GAVIFTGRDTK---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTA 346 (928)
Q Consensus 270 g~Vv~tG~~Tk---~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~ 346 (928)
+.|+.+|.+|. +.+...+++.+++++++.+++++.++.+++++++++.+++|.++... +|.
T Consensus 321 i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~~-------- 384 (741)
T PRK11033 321 LEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PWQ-------- 384 (741)
T ss_pred EEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CHH--------
Confidence 99999999995 44555677778899999999999999999999999998877443210 221
Q ss_pred ccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEec
Q 002398 347 YYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSD 426 (928)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~D 426 (928)
..+.+++.+++..|||+|.++.+++...+.... +++|+++|+.+.+|.|+++++||||
T Consensus 385 ------------~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~fD 442 (741)
T PRK11033 385 ------------EWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAFD 442 (741)
T ss_pred ------------HHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEEe
Confidence 146678889999999999888888877777666 7889999999999999999999999
Q ss_pred CCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHH
Q 002398 427 KTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQ 506 (928)
Q Consensus 427 KTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (928)
||||||+|+|++..+...+.. . . +
T Consensus 443 KTGTLT~g~~~v~~~~~~~~~-----~------------------------------------------------~---~ 466 (741)
T PRK11033 443 KTGTLTEGKPQVTDIHPATGI-----S------------------------------------------------E---S 466 (741)
T ss_pred CCCCCcCCceEEEEEEecCCC-----C------------------------------------------------H---H
Confidence 999999999999987642210 0 0 0
Q ss_pred HHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeeccc
Q 002398 507 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFS 586 (928)
Q Consensus 507 ~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~ 586 (928)
+++...+.. +..+.||.+.|++++++..+.. +||.
T Consensus 467 ~~l~~aa~~--------------e~~s~hPia~Ai~~~a~~~~~~-------------------------------~~~~ 501 (741)
T PRK11033 467 ELLALAAAV--------------EQGSTHPLAQAIVREAQVRGLA-------------------------------IPEA 501 (741)
T ss_pred HHHHHHHHH--------------hcCCCCHHHHHHHHHHHhcCCC-------------------------------CCCC
Confidence 222222211 1124699999999999876542 2344
Q ss_pred CCCceEEE-EEE-eCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHH
Q 002398 587 SSRKRMSV-IVR-SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664 (928)
Q Consensus 587 s~rkrmsv-iv~-~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~ 664 (928)
++++.+.- -++ .-+|..+. -|+++.+.+ ..+.....++.+..+|+|++++|
T Consensus 502 ~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~--------~~~~~~~~~~~~~~~g~~~v~va----------------- 554 (741)
T PRK11033 502 ESQRALAGSGIEGQVNGERVL--ICAPGKLPP--------LADAFAGQINELESAGKTVVLVL----------------- 554 (741)
T ss_pred cceEEEeeEEEEEEECCEEEE--Eecchhhhh--------ccHHHHHHHHHHHhCCCEEEEEE-----------------
Confidence 44444321 111 11444333 378877643 11234455678899999999999
Q ss_pred HHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCc
Q 002398 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (928)
Q Consensus 665 ~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (928)
.|.+++|+++++|++|++++++|++|++.|++++|+|||+..+|..+|+++||.
T Consensus 555 ----------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---- 608 (741)
T PRK11033 555 ----------------------RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---- 608 (741)
T ss_pred ----------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----
Confidence 577999999999999999999999999999999999999999999999999983
Q ss_pred eEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhc
Q 002398 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (928)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~ 824 (928)
T Consensus 609 -------------------------------------------------------------------------------- 608 (741)
T PRK11033 609 -------------------------------------------------------------------------------- 608 (741)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhh
Q 002398 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLL 902 (928)
Q Consensus 825 ~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll 902 (928)
.++++.|++|..+|+.+++ . +.|+|+|||.||++||+.|||||+|. ...+.++++||+++.+.++ |..+ +
T Consensus 609 ----~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~-i 680 (741)
T PRK11033 609 ----FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQM-I 680 (741)
T ss_pred ----eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHH-H
Confidence 3456789999999999986 3 58999999999999999999999995 3445588999999987665 6666 8
Q ss_pred cchhhhHHHhhhhheeeeecccccc
Q 002398 903 VHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 903 ~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
..||..+++|++++.|+|.+|+..|
T Consensus 681 ~~sr~~~~~I~~nl~~a~~~n~~~i 705 (741)
T PRK11033 681 ELSRATHANIRQNITIALGLKAIFL 705 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998765
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-64 Score=545.07 Aligned_cols=599 Identities=19% Similarity=0.234 Sum_probs=457.2
Q ss_pred hhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccC----CCCCCcccchhhhhHhhhhhhHHHHH
Q 002398 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPL----SPYSAVSNVLPLVVVIGATMGKEVLE 124 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~----~~~~~~~~~~~l~~vl~~~~i~~~~~ 124 (928)
+.|++.||.|.....|-+.+ ..|+.-|..|..|..-.++++....- .|- .|..+.-++.+++++....+++
T Consensus 43 ~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~-DW~DF~gI~~LLliNsti~Fve 117 (942)
T KOG0205|consen 43 EERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPP-DWQDFVGICCLLLINSTISFIE 117 (942)
T ss_pred HHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCc-chhhhhhhheeeeecceeeeee
Confidence 67889999999998887776 66777888999999999888887531 121 3444555666777788888899
Q ss_pred HHHHHhhhHHHh---cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcce
Q 002398 125 DWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLK 201 (928)
Q Consensus 125 d~~r~k~~~~~n---~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~ 201 (928)
+++.-..-.++. ..++.|+ |||+|.++..+.|||||||.++.|++||||++||.+.. +.||+|.|||||.|+
T Consensus 118 E~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESLpv 192 (942)
T KOG0205|consen 118 ENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESLPV 192 (942)
T ss_pred ccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCcccc
Confidence 998777654444 5789999 99999999999999999999999999999999999985 899999999999999
Q ss_pred eecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcce
Q 002398 202 LKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV 281 (928)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~ 281 (928)
.|.+++.+ |+|+.+-+|+ +.++|++||..|..
T Consensus 193 tKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 193 TKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 224 (942)
T ss_pred ccCCCCce---------------------------ecccccccce---------------------EEEEEEEeccceee
Confidence 99999987 7777776666 99999999999965
Q ss_pred ee---ccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHH
Q 002398 282 FQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAV 358 (928)
Q Consensus 282 ~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 358 (928)
++ .... .....++++-++-+..++++.+++ .+++-++..++.... -| .
T Consensus 225 GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~-g~lie~~vmy~~q~R--------~~-----------------r-- 275 (942)
T KOG0205|consen 225 GKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIAL-GMLIEITVMYPIQHR--------LY-----------------R-- 275 (942)
T ss_pred hhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHH-HHHHHHHhhhhhhhh--------hh-----------------h--
Confidence 44 2333 555789999999988776544333 222222222222111 00 0
Q ss_pred HHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEE
Q 002398 359 LHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEF 438 (928)
Q Consensus 359 ~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 438 (928)
..+-..+.++..-+|++||..++...++++.++ ++++++++...++|+|+.+|++|+|||||||.|++.+
T Consensus 276 ~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSv 345 (942)
T KOG0205|consen 276 DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 345 (942)
T ss_pred hhhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceec
Confidence 022223344555599999999999999999999 8899999999999999999999999999999999998
Q ss_pred EE----EEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhh
Q 002398 439 IK----CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAI 514 (928)
Q Consensus 439 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 514 (928)
.+ +...|.. ++.+ .++-|++.
T Consensus 346 dknl~ev~v~gv~------------------------------------------------------~D~~-~L~A~rAs 370 (942)
T KOG0205|consen 346 DKNLIEVFVKGVD------------------------------------------------------KDDV-LLTAARAS 370 (942)
T ss_pred CcCcceeeecCCC------------------------------------------------------hHHH-HHHHHHHh
Confidence 65 1222210 0000 11222221
Q ss_pred cceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEE
Q 002398 515 CHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594 (928)
Q Consensus 515 c~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv 594 (928)
.. ...+..|.|++...++- +..+..|+.++.+||++..||...
T Consensus 371 ----r~-----------en~DAID~A~v~~L~dP----------------------Keara~ikevhF~PFnPV~Krta~ 413 (942)
T KOG0205|consen 371 ----RK-----------ENQDAIDAAIVGMLADP----------------------KEARAGIKEVHFLPFNPVDKRTAL 413 (942)
T ss_pred ----hh-----------cChhhHHHHHHHhhcCH----------------------HHHhhCceEEeeccCCccccceEE
Confidence 11 13578889998865431 112467899999999999999999
Q ss_pred EEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCH
Q 002398 595 IVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADR 674 (928)
Q Consensus 595 iv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r 674 (928)
.+.+++|..+..+||||+-|++.|+... +.++...+.+++|++.|+|.|++|++..++..-
T Consensus 414 ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~------------------ 474 (942)
T KOG0205|consen 414 TYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKFAERGLRSLAVARQEVPEKTK------------------ 474 (942)
T ss_pred EEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHHHHhcchhhhhhhhccccccc------------------
Confidence 9999999999999999999999998754 688899999999999999999999998876421
Q ss_pred HHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCC
Q 002398 675 EELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP 754 (928)
Q Consensus 675 ~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~ 754 (928)
+.-..-.+++|+.-+-||+|.+..++|.+....|..|-|+|||...-+...++.+|+=.+-.+--.+-+...
T Consensus 475 --------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~ 546 (942)
T KOG0205|consen 475 --------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGK 546 (942)
T ss_pred --------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCC
Confidence 111256889999999999999999999999999999999999999999999999998443211000000000
Q ss_pred ccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecC
Q 002398 755 ESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS 834 (928)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~s 834 (928)
+ + .+.|.......+ +..-|+-+.
T Consensus 547 ~-----------------------------~--------------~~~~~~v~elie--------------~adgfAgVf 569 (942)
T KOG0205|consen 547 D-----------------------------G--------------SMPGSPVDELIE--------------KADGFAGVF 569 (942)
T ss_pred C-----------------------------C--------------CCCCCcHHHHhh--------------hccCccccC
Confidence 0 0 000111111110 122688899
Q ss_pred cccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHh
Q 002398 835 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRI 912 (928)
Q Consensus 835 p~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i 912 (928)
|++|..+|+.||+ .++.++|.|||.||+|+|+.||+||++.+. .+.|..+||+|+..... +... +..+|.+|+|+
T Consensus 570 pehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~a-tdaar~asdiVltepglSviI~a-vltSraIfqrm 646 (942)
T KOG0205|consen 570 PEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADA-TDAARSASDIVLTEPGLSVIISA-VLTSRAIFQRM 646 (942)
T ss_pred HHHHHHHHHHHhh-cCceecccCCCcccchhhcccccceeeccc-hhhhcccccEEEcCCCchhhHHH-HHHHHHHHHHH
Confidence 9999999999998 899999999999999999999999999554 44489999999998555 5555 77999999999
Q ss_pred hhhheeeeecc
Q 002398 913 SSMVCFTLKML 923 (928)
Q Consensus 913 ~~~i~~~~~~n 923 (928)
+.+..|.+.-.
T Consensus 647 knytiyavsit 657 (942)
T KOG0205|consen 647 KNYTIYAVSIT 657 (942)
T ss_pred hhheeeeehhH
Confidence 99999987654
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-64 Score=566.81 Aligned_cols=512 Identities=20% Similarity=0.245 Sum_probs=401.0
Q ss_pred CCcccchhhhhHhhhhhhHHHHHHHHHHhhhHH------HhcceEEEEeCCCe-EEEEecccCccccEEEeccCCcCCcc
Q 002398 102 SAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIE------VNNRKVKVHCGEGA-FDYTKWRDLKVGDVVKVEKDEFFPAD 174 (928)
Q Consensus 102 ~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~------~n~~~~~v~~r~g~-~~~i~~~~L~vGDII~l~~ge~iPaD 174 (928)
.+|.+..+|+.++.+. .++|...++|+... +.+..+.++ .+|+ .++|+.+.|++||+|+|.+|+.||+|
T Consensus 339 tfFdt~~MLi~fi~lg---r~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvD 414 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLG---RWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVD 414 (951)
T ss_pred hhccccHHHHHHHHHH---HHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccc
Confidence 3444444444444444 45555555555333 347889999 7885 89999999999999999999999999
Q ss_pred EEEEeecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCc
Q 002398 175 LILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQ 254 (928)
Q Consensus 175 ~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n 254 (928)
|++++|+ ++||||.+|||+.|+.|++++.+ .+|+++++|.
T Consensus 415 G~Vv~Gs-----s~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~-------- 454 (951)
T KOG0207|consen 415 GVVVDGS-----SEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT-------- 454 (951)
T ss_pred cEEEeCc-----eeechhhccCCceecccCCCCee---------------------------eeeeecCCce--------
Confidence 9999999 89999999999999999999877 8999999887
Q ss_pred ccccCceeecCCeEEEEEEEecCCcc---eeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccC
Q 002398 255 LLLRDSKLRNTDCIYGAVIFTGRDTK---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQD 331 (928)
Q Consensus 255 ~l~rGs~l~~t~~~~g~Vv~tG~~Tk---~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 331 (928)
.+..++.+|.||. +.+...+++..++|+|+.+|+++.+|.++++++++.++++|.+.....
T Consensus 455 -------------l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~--- 518 (951)
T KOG0207|consen 455 -------------LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV--- 518 (951)
T ss_pred -------------EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---
Confidence 8999999999995 566677889999999999999999999999999999999998876533
Q ss_pred cccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCcccccc
Q 002398 332 GKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTS 411 (928)
Q Consensus 332 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~ 411 (928)
.||- ..+...+...|..++.+++.+|||+|.++.+.+...+.-.- +.+|+++|..
T Consensus 519 ----~~~~-----------~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGg 573 (951)
T KOG0207|consen 519 ----FKYP-----------RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGG 573 (951)
T ss_pred ----ccCc-----------chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCc
Confidence 2221 11112344578889999999999999998887766665444 7899999999
Q ss_pred chhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhh
Q 002398 412 NLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERI 491 (928)
Q Consensus 412 ~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (928)
+.+|.+.+|++|+||||||||+|++.+.++.+.....
T Consensus 574 e~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~------------------------------------------- 610 (951)
T KOG0207|consen 574 EALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI------------------------------------------- 610 (951)
T ss_pred HHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc-------------------------------------------
Confidence 9999999999999999999999999999887544320
Q ss_pred hcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCc
Q 002398 492 MNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 571 (928)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~ 571 (928)
..++++...+.- +-.++||...|++++|+...-. ++...+......+|+
T Consensus 611 ------------~~~e~l~~v~a~--------------Es~SeHPig~AIv~yak~~~~~-----~~~~~~~~~~~~pg~ 659 (951)
T KOG0207|consen 611 ------------SLKEALALVAAM--------------ESGSEHPIGKAIVDYAKEKLVE-----PNPEGVLSFEYFPGE 659 (951)
T ss_pred ------------cHHHHHHHHHHH--------------hcCCcCchHHHHHHHHHhcccc-----cCccccceeecccCC
Confidence 011222222211 1225799999999999987611 111111111111222
Q ss_pred ceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEec
Q 002398 572 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYREL 651 (928)
Q Consensus 572 ~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l 651 (928)
+ ....+.+ ++.- .+=|.-+ ++..++....++....+++-...|..+.+++
T Consensus 660 g-----------------~~~~~~~---~~~~--i~iGN~~----~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~---- 709 (951)
T KOG0207|consen 660 G-----------------IYVTVTV---DGNE--VLIGNKE----WMSRNGCSIPDDILDALTESERKGQTVVYVA---- 709 (951)
T ss_pred C-----------------cccceEE---eeeE--EeechHH----HHHhcCCCCchhHHHhhhhHhhcCceEEEEE----
Confidence 2 1111111 1211 2224432 3333333455667788888899999999998
Q ss_pred CHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHH
Q 002398 652 DEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 731 (928)
Q Consensus 652 ~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~ 731 (928)
-|.++.|+++++|++|+++..+|+.||+.||++.|+|||+..+|.
T Consensus 710 -----------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~ 754 (951)
T KOG0207|consen 710 -----------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAAR 754 (951)
T ss_pred -----------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHH
Confidence 688999999999999999999999999999999999999999999
Q ss_pred HHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhH
Q 002398 732 NIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE 811 (928)
Q Consensus 732 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~ 811 (928)
++|+++|+..
T Consensus 755 svA~~VGi~~---------------------------------------------------------------------- 764 (951)
T KOG0207|consen 755 SVAQQVGIDN---------------------------------------------------------------------- 764 (951)
T ss_pred HHHHhhCcce----------------------------------------------------------------------
Confidence 9999999531
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceec
Q 002398 812 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI 891 (928)
Q Consensus 812 ~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi 891 (928)
|+|.+.|+||...|+.+|+ .+..|+|+|||.||+|+|.+|||||+|... ...|.++||+++
T Consensus 765 -----------------V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~g-s~vAieaADIVL 825 (951)
T KOG0207|consen 765 -----------------VYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAG-SDVAIEAADIVL 825 (951)
T ss_pred -----------------EEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccc-cHHHHhhCCEEE
Confidence 9999999999999999998 788999999999999999999999999433 444999999999
Q ss_pred ccccc--cchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 892 AQFRF--LERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 892 ~~f~~--l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+..+. +... +..+|+..+|++.++.|++.+|+.+|
T Consensus 826 mrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~I 862 (951)
T KOG0207|consen 826 MRNDLRDVPFA-IDLSRKTVKRIKLNFVWALIYNLVGI 862 (951)
T ss_pred EccchhhhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence 98665 4445 78899999999999999999999865
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-62 Score=576.54 Aligned_cols=498 Identities=21% Similarity=0.253 Sum_probs=390.8
Q ss_pred CcccchhhhhHhhhhhhHHHHHHHHHHhhhHHH---hcceEEEEeCCC-eEEEEecccCccccEEEeccCCcCCccEEEE
Q 002398 103 AVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEV---NNRKVKVHCGEG-AFDYTKWRDLKVGDVVKVEKDEFFPADLILL 178 (928)
Q Consensus 103 ~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~~---n~~~~~v~~r~g-~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL 178 (928)
.|..+..++++++++...+.+.+++..+..+.+ ++..++|+ |+| ++++|++++|+|||+|.|++||.|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi 95 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI 95 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence 344555566666666666666665555544443 36789999 885 9999999999999999999999999999999
Q ss_pred eecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCccccc
Q 002398 179 SSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLR 258 (928)
Q Consensus 179 ~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~r 258 (928)
+|+ +.||||+||||+.|+.|.+++.. |+||.+.+|.
T Consensus 96 ~g~-----~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~------------ 131 (556)
T TIGR01525 96 SGE-----SEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS------------ 131 (556)
T ss_pred ecc-----eEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce------------
Confidence 997 89999999999999999987654 8999888777
Q ss_pred CceeecCCeEEEEEEEecCCcceee---ccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccc
Q 002398 259 DSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMK 335 (928)
Q Consensus 259 Gs~l~~t~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 335 (928)
+.++|+.||.+|.+.+ .....+.+++++++.+++++.++.++.++++++.+++|.+...
T Consensus 132 ---------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~--------- 193 (556)
T TIGR01525 132 ---------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA--------- 193 (556)
T ss_pred ---------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------
Confidence 9999999999996544 3344566789999999999999999999998888877654321
Q ss_pred cccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhh
Q 002398 336 RWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNE 415 (928)
Q Consensus 336 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e 415 (928)
| ..+..++.+++..|||+|+++++++...+..++ .++++++|+++.+|
T Consensus 194 -~---------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le 241 (556)
T TIGR01525 194 -L---------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALE 241 (556)
T ss_pred -c---------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHH
Confidence 0 267788999999999999999999999999888 78999999999999
Q ss_pred hccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCC
Q 002398 416 ELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGS 495 (928)
Q Consensus 416 ~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (928)
.||++|++|||||||||+|+|++.++...+... .
T Consensus 242 ~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~---~------------------------------------------- 275 (556)
T TIGR01525 242 KLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS---I------------------------------------------- 275 (556)
T ss_pred HhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC---c-------------------------------------------
Confidence 999999999999999999999999886543210 0
Q ss_pred CCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeE
Q 002398 496 WVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVER 575 (928)
Q Consensus 496 ~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~ 575 (928)
...+++...+.+. ..+.||.+.|++++++..|..... +. .+.
T Consensus 276 --------~~~~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~--~~--~~~------------ 317 (556)
T TIGR01525 276 --------SEEELLALAAALE--------------QSSSHPLARAIVRYAKKRGLELPK--QE--DVE------------ 317 (556)
T ss_pred --------cHHHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCccc--cc--Cee------------
Confidence 0012222222111 124699999999999987653211 00 000
Q ss_pred EEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHH
Q 002398 576 SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKE 655 (928)
Q Consensus 576 ~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e 655 (928)
.+ ..+.++..+ +|. ..+..|+++.+ + ... .........++.++.+|+|++.++
T Consensus 318 ------~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~---~~~-~~~~~~~~~~~~~~~~g~~~~~v~-------- 370 (556)
T TIGR01525 318 ------EV----PGKGVEATV---DGQ-EEVRIGNPRLL-E---LAA-EPISASPDLLNEGESQGKTVVFVA-------- 370 (556)
T ss_pred ------Ee----cCCeEEEEE---CCe-eEEEEecHHHH-h---hcC-CCchhhHHHHHHHhhCCcEEEEEE--------
Confidence 00 011222221 231 12334666544 1 111 112223456778889999999998
Q ss_pred HHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcC-CeEEEEcCCChhHHHHHH
Q 002398 656 YKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIG 734 (928)
Q Consensus 656 ~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aG-I~v~mlTGD~~~ta~~ia 734 (928)
.|.+++|.+.++|+++|+++++|+.|++.| ++++|+|||+..++..++
T Consensus 371 -------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~ 419 (556)
T TIGR01525 371 -------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419 (556)
T ss_pred -------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH
Confidence 577999999999999999999999999999 999999999999999999
Q ss_pred HHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHH
Q 002398 735 FACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV 814 (928)
Q Consensus 735 ~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~ 814 (928)
+++|+..
T Consensus 420 ~~lgi~~------------------------------------------------------------------------- 426 (556)
T TIGR01525 420 AELGIDE------------------------------------------------------------------------- 426 (556)
T ss_pred HHhCCCe-------------------------------------------------------------------------
Confidence 9999931
Q ss_pred HHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 815 KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 815 ~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.||+||++. .....++..||+++.+.
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~ 490 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLND 490 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCC
Confidence 7788899999999999997 6789999999999999999999999995 44455888999999964
Q ss_pred cc--cchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 895 RF--LERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 895 ~~--l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+. +..+ +..||..++++++++.|.+.+|++.|
T Consensus 491 ~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i 524 (556)
T TIGR01525 491 DLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAI 524 (556)
T ss_pred CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 8777 89999999999999999999999875
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-61 Score=561.03 Aligned_cols=483 Identities=22% Similarity=0.283 Sum_probs=378.6
Q ss_pred CcccchhhhhHhhhhhhHHHHHHHHHHhhhHH---HhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEe
Q 002398 103 AVSNVLPLVVVIGATMGKEVLEDWRRKKQDIE---VNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS 179 (928)
Q Consensus 103 ~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~---~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~ 179 (928)
++.....++++++++-..|.+...|..+..+. +.+.++++++++|.+++|+.++|+|||+|.|++||.|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 44555555555555544444444444443333 346789999335778999999999999999999999999999999
Q ss_pred ecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccC
Q 002398 180 SSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRD 259 (928)
Q Consensus 180 ~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rG 259 (928)
|+ +.||||.||||+.|+.|.+++.+ |+||++.+|.
T Consensus 133 g~-----~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------- 167 (562)
T TIGR01511 133 GE-----SEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------- 167 (562)
T ss_pred Cc-----eEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce-------------
Confidence 98 89999999999999999998765 9999999887
Q ss_pred ceeecCCeEEEEEEEecCCcce---eeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccc
Q 002398 260 SKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKR 336 (928)
Q Consensus 260 s~l~~t~~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 336 (928)
+.+.|+.+|.+|.+ .+...+++.+++++++.+++++.++++++++++++.+++|.
T Consensus 168 --------~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------- 225 (562)
T TIGR01511 168 --------LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------- 225 (562)
T ss_pred --------EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 99999999999965 44445667778999999999999999998888888776542
Q ss_pred ccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhh
Q 002398 337 WYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEE 416 (928)
Q Consensus 337 w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~ 416 (928)
..+.+++.+++..|||+|+++++++...+...+ +++|+++|+++.+|.
T Consensus 226 ----------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~ 273 (562)
T TIGR01511 226 ----------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALER 273 (562)
T ss_pred ----------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHH
Confidence 156778899999999999999999999988887 889999999999999
Q ss_pred ccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCC
Q 002398 417 LGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSW 496 (928)
Q Consensus 417 Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (928)
|+++|+||||||||||+|+|++..+...+.. .
T Consensus 274 l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-----~------------------------------------------- 305 (562)
T TIGR01511 274 AANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-----D------------------------------------------- 305 (562)
T ss_pred hhCCCEEEECCCCCCcCCCEEEEEEecCCCC-----C-------------------------------------------
Confidence 9999999999999999999999987532210 0
Q ss_pred CCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEE
Q 002398 497 VNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERS 576 (928)
Q Consensus 497 ~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~ 576 (928)
. ++++..++.+. ..+.||.+.|+++++++.+..... +......+|+|
T Consensus 306 -----~---~~~l~~aa~~e--------------~~s~HPia~Ai~~~~~~~~~~~~~-------~~~~~~~~g~G---- 352 (562)
T TIGR01511 306 -----R---TELLALAAALE--------------AGSEHPLAKAIVSYAKEKGITLVE-------VSDFKAIPGIG---- 352 (562)
T ss_pred -----H---HHHHHHHHHHh--------------ccCCChHHHHHHHHHHhcCCCcCC-------CCCeEEECCce----
Confidence 0 12222222111 124699999999999887653211 00000011222
Q ss_pred EEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHH
Q 002398 577 YSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEY 656 (928)
Q Consensus 577 ~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~ 656 (928)
+...+ +|. .+..|+++.+.+ .+.. +..+..+|.+++.++
T Consensus 353 ---------------i~~~~---~g~--~~~iG~~~~~~~----~~~~--------~~~~~~~g~~~~~~~--------- 391 (562)
T TIGR01511 353 ---------------VEGTV---EGT--KIQLGNEKLLGE----NAIK--------IDGKAEQGSTSVLVA--------- 391 (562)
T ss_pred ---------------EEEEE---CCE--EEEEECHHHHHh----CCCC--------CChhhhCCCEEEEEE---------
Confidence 22211 332 234588766532 1111 112457899998887
Q ss_pred HHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH
Q 002398 657 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (928)
Q Consensus 657 ~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~ 736 (928)
.|.+++|.++++|++||+++++|++|++.|++++|+|||+..++..++++
T Consensus 392 ------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 392 ------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred ------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999
Q ss_pred cCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHH
Q 002398 737 CSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKD 816 (928)
Q Consensus 737 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~ 816 (928)
+||.
T Consensus 442 lgi~---------------------------------------------------------------------------- 445 (562)
T TIGR01511 442 LGIN---------------------------------------------------------------------------- 445 (562)
T ss_pred cCCc----------------------------------------------------------------------------
Confidence 9982
Q ss_pred HHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc--c
Q 002398 817 LFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--F 894 (928)
Q Consensus 817 ~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~--f 894 (928)
+++++.|++|..+++.+++ .++.|+|+|||.||++|++.||+||+|.. ....++..||+++.+ .
T Consensus 446 ------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~-g~~~a~~~Advvl~~~~l 511 (562)
T TIGR01511 446 ------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGA-GTDVAIEAADVVLMRNDL 511 (562)
T ss_pred ------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCC-cCHHHHhhCCEEEeCCCH
Confidence 4566789999999999987 78899999999999999999999999953 344588999999985 4
Q ss_pred cccchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 895 RFLERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 895 ~~l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+.|..+ +..||..++++++++.|++.+|+..|
T Consensus 512 ~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 512 NDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 447777 89999999999999999999998765
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-60 Score=557.11 Aligned_cols=490 Identities=21% Similarity=0.266 Sum_probs=383.5
Q ss_pred HHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHHHHhhhHH---HhcceEEEEeCCCeEEEEecccCccccEE
Q 002398 87 FLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIE---VNNRKVKVHCGEGAFDYTKWRDLKVGDVV 163 (928)
Q Consensus 87 ~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~---~n~~~~~v~~r~g~~~~i~~~~L~vGDII 163 (928)
++++++++++. +.|.....++++++++...+.+.+++..+..+. +++.+++|+ |+|+++.+++++|+|||+|
T Consensus 5 ~~~a~~~~~~~----~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~GDiv 79 (536)
T TIGR01512 5 MALAALGAVAI----GEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVGDVV 79 (536)
T ss_pred HHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCCCEE
Confidence 44444455542 233444555566666666666666665555443 357899999 9999999999999999999
Q ss_pred EeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEE
Q 002398 164 KVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLEL 243 (928)
Q Consensus 164 ~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~ 243 (928)
.|++||.|||||+|++|+ +.||||+||||+.|+.|.+++.. |+||.+.
T Consensus 80 ~v~~G~~iP~Dg~ii~g~-----~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~ 127 (536)
T TIGR01512 80 VVKPGERVPVDGVVLSGT-----STVDESALTGESVPVEKAPGDEV---------------------------FAGAINL 127 (536)
T ss_pred EEcCCCEeecceEEEeCc-----EEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEEC
Confidence 999999999999999997 89999999999999999987654 9999998
Q ss_pred cCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceee---ccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 002398 244 EEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF 320 (928)
Q Consensus 244 ~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~ 320 (928)
+|. +.++|+.||.+|.+.+ ....++.+++++++.+++++.++.+++++++++.+++
T Consensus 128 ~G~---------------------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (536)
T TIGR01512 128 DGV---------------------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLV 186 (536)
T ss_pred Cce---------------------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877 9999999999996644 3445566789999999999999999988888877766
Q ss_pred HHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhcccccccc
Q 002398 321 FGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYE 400 (928)
Q Consensus 321 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~ 400 (928)
|.+.. .| ...+.+++.+++.+|||+|+++++++...+..++
T Consensus 187 ~~~~~----------~~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~--------- 227 (536)
T TIGR01512 187 PGLLK----------RW--------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA--------- 227 (536)
T ss_pred HHHhc----------cc--------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH---------
Confidence 54321 11 0157778899999999999999999999998888
Q ss_pred ccCCCccccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccc
Q 002398 401 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 480 (928)
Q Consensus 401 ~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (928)
.++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 -~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 228 -ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred -HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 8899999999999999999999999999999999999876421
Q ss_pred cCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCee
Q 002398 481 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 560 (928)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~ 560 (928)
+++...+.+. ..+.||.+.|++++++..+ .+ ..
T Consensus 271 --------------------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~-~~-----~~- 303 (536)
T TIGR01512 271 --------------------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE-NV-----ES- 303 (536)
T ss_pred --------------------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC-CC-----cc-
Confidence 1122222111 1246999999999998754 10 00
Q ss_pred EEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhcc
Q 002398 561 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 640 (928)
Q Consensus 561 ~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~G 640 (928)
+. .+| .+.+...+ +|..++ .|+++.+.+ .+ +..+..+|
T Consensus 304 -~~------------------~~~----g~gi~~~~---~g~~~~--ig~~~~~~~----~~----------~~~~~~~~ 341 (536)
T TIGR01512 304 -VE------------------EVP----GEGVRAVV---DGGEVR--IGNPRSLEA----AV----------GARPESAG 341 (536)
T ss_pred -eE------------------Eec----CCeEEEEE---CCeEEE--EcCHHHHhh----cC----------CcchhhCC
Confidence 00 001 11111111 333333 377644321 10 11456678
Q ss_pred CeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCC-eE
Q 002398 641 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI-KL 719 (928)
Q Consensus 641 lr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI-~v 719 (928)
.+++.++ .|..++|.+.++|+++++++++|+.|+++|+ ++
T Consensus 342 ~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v 382 (536)
T TIGR01512 342 KTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKV 382 (536)
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcE
Confidence 8887776 6889999999999999999999999999999 99
Q ss_pred EEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEE
Q 002398 720 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 799 (928)
Q Consensus 720 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 799 (928)
+|+|||+..+|..+++++|+..
T Consensus 383 ~vvTgd~~~~a~~i~~~lgi~~---------------------------------------------------------- 404 (536)
T TIGR01512 383 VMLTGDRRAVAERVARELGIDE---------------------------------------------------------- 404 (536)
T ss_pred EEEcCCCHHHHHHHHHHcCChh----------------------------------------------------------
Confidence 9999999999999999999942
Q ss_pred EEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcc
Q 002398 800 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 879 (928)
Q Consensus 800 vi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~ 879 (928)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.||+||++....
T Consensus 405 -----------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~ 454 (536)
T TIGR01512 405 -----------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASG 454 (536)
T ss_pred -----------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCc
Confidence 6677889999999999987 7889999999999999999999999995233
Q ss_pred hhhHhHhcceeccc--ccccchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 880 GMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 880 ~~~a~~~aD~vi~~--f~~l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
...++..||+++.+ +..|..+ +..||..++++++++.|.+.+|++.|
T Consensus 455 ~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i 503 (536)
T TIGR01512 455 SDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLI 503 (536)
T ss_pred cHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45588999999964 4558777 89999999999999999999998765
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=576.78 Aligned_cols=491 Identities=18% Similarity=0.218 Sum_probs=387.7
Q ss_pred ccchhhhhHhhhhhhHHHHHHHHHHhhhHH------HhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEE
Q 002398 105 SNVLPLVVVIGATMGKEVLEDWRRKKQDIE------VNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILL 178 (928)
Q Consensus 105 ~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~------~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL 178 (928)
.+...+++++.++ +++|.+-+.|+.+. +.+.+++++ |+|.+++|+.++|+|||+|.|++||.|||||+|+
T Consensus 287 ~~~~~i~~~~~~g---~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 287 EASAMIIGLINLG---HMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 3344444444444 55555555554333 337889999 9999999999999999999999999999999999
Q ss_pred eecCCCceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCccccc
Q 002398 179 SSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLR 258 (928)
Q Consensus 179 ~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~r 258 (928)
+|+ +.||||+||||+.|+.|.+++.+ |+||++.+|.
T Consensus 363 ~g~-----~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~------------ 398 (834)
T PRK10671 363 QGE-----AWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS------------ 398 (834)
T ss_pred Ece-----EEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee------------
Confidence 997 89999999999999999998866 9999999887
Q ss_pred CceeecCCeEEEEEEEecCCcce---eeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccc
Q 002398 259 DSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMK 335 (928)
Q Consensus 259 Gs~l~~t~~~~g~Vv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 335 (928)
+.+.|+.+|.+|.+ ....++++..++++++.+++++.++++++++++++.+++|.+...
T Consensus 399 ---------~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~--------- 460 (834)
T PRK10671 399 ---------VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP--------- 460 (834)
T ss_pred ---------EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 99999999999954 444556666789999999999999999999999888877754321
Q ss_pred cccccCCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhh
Q 002398 336 RWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNE 415 (928)
Q Consensus 336 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e 415 (928)
| ..+...+..++.+++.+|||+|+++++++...+..++ +++|+++|+.+.+|
T Consensus 461 -~-----------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le 512 (834)
T PRK10671 461 -A-----------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQ 512 (834)
T ss_pred -c-----------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHH
Confidence 1 0122367788999999999999999999999998888 89999999999999
Q ss_pred hccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCC
Q 002398 416 ELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGS 495 (928)
Q Consensus 416 ~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (928)
.||+++++|||||||||+|+|++..+...+.. .+
T Consensus 513 ~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~~----------------------------------------- 546 (834)
T PRK10671 513 RASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-----DE----------------------------------------- 546 (834)
T ss_pred hhcCCCEEEEcCCCccccCceEEEEEEccCCC-----CH-----------------------------------------
Confidence 99999999999999999999999877532210 00
Q ss_pred CCCCCChHHHHHHHH-HHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCccee
Q 002398 496 WVNEPHADVIQKFLR-LLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVE 574 (928)
Q Consensus 496 ~~~~~~~~~~~~~~~-~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~ 574 (928)
.+++. +.+++. .+.||.+.|+++++....... +......+|.|
T Consensus 547 ----------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~~---------~~~~~~~~g~G-- 590 (834)
T PRK10671 547 ----------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLPQ---------VNGFRTLRGLG-- 590 (834)
T ss_pred ----------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCCC---------cccceEecceE--
Confidence 01122 222221 146999999999886432100 00000001111
Q ss_pred EEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHH
Q 002398 575 RSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEK 654 (928)
Q Consensus 575 ~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~ 654 (928)
+...+ +|.. +..|+++.+.+. + ...+.+...++.+..+|.+++++|
T Consensus 591 -----------------v~~~~---~g~~--~~~G~~~~~~~~----~-~~~~~~~~~~~~~~~~g~~~v~va------- 636 (834)
T PRK10671 591 -----------------VSGEA---EGHA--LLLGNQALLNEQ----Q-VDTKALEAEITAQASQGATPVLLA------- 636 (834)
T ss_pred -----------------EEEEE---CCEE--EEEeCHHHHHHc----C-CChHHHHHHHHHHHhCCCeEEEEE-------
Confidence 11111 3443 345888766431 1 112345566778889999999998
Q ss_pred HHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHH
Q 002398 655 EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (928)
Q Consensus 655 e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia 734 (928)
.|..++|+++++|++|++++++|+.|++.|++++|+|||+..+|..++
T Consensus 637 --------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia 684 (834)
T PRK10671 637 --------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA 684 (834)
T ss_pred --------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 566899999999999999999999999999999999999999999999
Q ss_pred HHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHH
Q 002398 735 FACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV 814 (928)
Q Consensus 735 ~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~ 814 (928)
+++||..
T Consensus 685 ~~lgi~~------------------------------------------------------------------------- 691 (834)
T PRK10671 685 KEAGIDE------------------------------------------------------------------------- 691 (834)
T ss_pred HHcCCCE-------------------------------------------------------------------------
Confidence 9999842
Q ss_pred HHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 815 KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 815 ~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+|+ +..+.++++||+++.+.
T Consensus 692 --------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 692 --------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRH 755 (834)
T ss_pred --------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecC
Confidence 7788899999999999987 7889999999999999999999999994 44555999999999975
Q ss_pred cc--cchhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 895 RF--LERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 895 ~~--l~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+. |..+ +..||..++++++++.|+|.+|+.+|
T Consensus 756 ~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 756 SLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 7777 89999999999999999999998875
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-50 Score=425.00 Aligned_cols=489 Identities=21% Similarity=0.256 Sum_probs=361.0
Q ss_pred hhhhhHhhhhhhHHHHHHHHHHhhh---HHHh-cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCC
Q 002398 108 LPLVVVIGATMGKEVLEDWRRKKQD---IEVN-NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYE 183 (928)
Q Consensus 108 ~~l~~vl~~~~i~~~~~d~~r~k~~---~~~n-~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~ 183 (928)
+.|+|.+++..+.|.+.+-|-+.+- +... ...++++..+|.++.|++.+|+.||+|+|+.||.||+||-+++|.
T Consensus 70 ~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~-- 147 (681)
T COG2216 70 IILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV-- 147 (681)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeee--
Confidence 3445555555666777666544332 2222 234666634599999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceee
Q 002398 184 EAICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLR 263 (928)
Q Consensus 184 ~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~ 263 (928)
++||||.+||||-|+.|.++..... +--|+.+.
T Consensus 148 ---asVdESAITGESaPViresGgD~ss--------------------------------------------VtGgT~v~ 180 (681)
T COG2216 148 ---ASVDESAITGESAPVIRESGGDFSS--------------------------------------------VTGGTRVL 180 (681)
T ss_pred ---eecchhhccCCCcceeeccCCCccc--------------------------------------------ccCCcEEe
Confidence 8999999999999999999854310 11244444
Q ss_pred cCCeEEEEEEEecCCc---ceeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccccccc
Q 002398 264 NTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLR 340 (928)
Q Consensus 264 ~t~~~~g~Vv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~ 340 (928)
++|+...+...-.+| |+....+.+..+++|-|-.++.+...+.++.+ +++++..-+..|.. .
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL-~~~~Tl~p~a~y~~-g------------ 245 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL-LAVATLYPFAIYSG-G------------ 245 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHcC-C------------
Confidence 488999888888888 45666777778888888777665444332222 22221111111110 0
Q ss_pred CCCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccce
Q 002398 341 PDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420 (928)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v 420 (928)
. ...+...+.++++++|-...-.++-.-..++-++ .+.+++.++..+.|..|.|
T Consensus 246 ~----------------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDv 299 (681)
T COG2216 246 G----------------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDV 299 (681)
T ss_pred C----------------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCc
Confidence 0 0135556788899999987666655555555555 7789999999999999999
Q ss_pred eEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCC
Q 002398 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEP 500 (928)
Q Consensus 421 ~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (928)
|+++.|||||+|-|+-.-..+...+..
T Consensus 300 dtliLDKTGTIT~GnR~A~~f~p~~gv----------------------------------------------------- 326 (681)
T COG2216 300 DTLLLDKTGTITLGNRQASEFIPVPGV----------------------------------------------------- 326 (681)
T ss_pred cEEEecccCceeecchhhhheecCCCC-----------------------------------------------------
Confidence 999999999999887655444322211
Q ss_pred ChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEe
Q 002398 501 HADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLL 580 (928)
Q Consensus 501 ~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il 580 (928)
..+++..+..+++-. -+.|...++++.|++.|+....+.. . ...
T Consensus 327 ---~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~-----------------~--~~~ 370 (681)
T COG2216 327 ---SEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDL-----------------Q--SHA 370 (681)
T ss_pred ---CHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCcccc-----------------c--ccc
Confidence 011333333333211 2478889999999998865533110 0 023
Q ss_pred eeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHH
Q 002398 581 NVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFN 660 (928)
Q Consensus 581 ~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~ 660 (928)
...||+.+.|...+-.. ++ .-+-|||.+.|.......+...+++++...++-++.|-..|+++
T Consensus 371 ~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~------------- 433 (681)
T COG2216 371 EFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV------------- 433 (681)
T ss_pred eeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE-------------
Confidence 45799988766665443 33 56779999999999887766788999999999999999999998
Q ss_pred HHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 661 EEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 661 ~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.|-.++|++.++|-+|+|.+|-+.+||+.|||.+|+|||++.||..||.+.|+.
T Consensus 434 --------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 434 --------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred --------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 688999999999999999999999999999999999999999999999999985
Q ss_pred cCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHH
Q 002398 741 RQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLE 820 (928)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~ 820 (928)
.
T Consensus 488 d------------------------------------------------------------------------------- 488 (681)
T COG2216 488 D------------------------------------------------------------------------------- 488 (681)
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred HhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cc
Q 002398 821 LAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LE 898 (928)
Q Consensus 821 ~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~ 898 (928)
..+.++|++|..+++.-|. .|+.|+|+|||.||+|+|.+||||+|| ++....||+++.++=++-+. |.
T Consensus 489 --------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AM-NsGTqAAkEAaNMVDLDS~PTKli 558 (681)
T COG2216 489 --------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSNPTKLI 558 (681)
T ss_pred --------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhh-ccccHHHHHhhcccccCCCcccee
Confidence 5678999999999999998 899999999999999999999999999 33334499999998776443 44
Q ss_pred hhhhcchhhh
Q 002398 899 RLLLVHGHWC 908 (928)
Q Consensus 899 ~lll~~gr~~ 908 (928)
.. +..|+..
T Consensus 559 ev-V~IGKql 567 (681)
T COG2216 559 EV-VEIGKQL 567 (681)
T ss_pred hH-hhhhhhh
Confidence 44 5556554
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=274.79 Aligned_cols=221 Identities=27% Similarity=0.381 Sum_probs=185.2
Q ss_pred hhhHhhhhhhHHHHHHHHHHhhhHHHh---cce-EEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEe-ecCCC
Q 002398 110 LVVVIGATMGKEVLEDWRRKKQDIEVN---NRK-VKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLS-SSYEE 184 (928)
Q Consensus 110 l~~vl~~~~i~~~~~d~~r~k~~~~~n---~~~-~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~-~s~~~ 184 (928)
++++++++.+.+.++++++++..++++ +.+ ++|+ |||++++++|++|+|||||+|++||.+||||+||+ ++
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~--- 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS--- 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE---
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCccceeccc---
Confidence 567788888889999999999988875 344 8999 99999999999999999999999999999999999 55
Q ss_pred ceEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeec
Q 002398 185 AICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRN 264 (928)
Q Consensus 185 ~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~ 264 (928)
++||||.||||+.|+.|.+. +++..|++++||.+.
T Consensus 78 --~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~- 112 (230)
T PF00122_consen 78 --AYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV- 112 (230)
T ss_dssp --EEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-
T ss_pred --cccccccccccccccccccc------------------------------------------cccccchhhcccccc-
Confidence 99999999999999999864 356789999999999
Q ss_pred CCeEEEEEEEecCCcceeec---cCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccC
Q 002398 265 TDCIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRP 341 (928)
Q Consensus 265 t~~~~g~Vv~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~ 341 (928)
+||++++|++||.+|++.+. ....+.+++++++.++++..+++++.++++++.+++++++... ..|+
T Consensus 113 ~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--- 182 (230)
T PF00122_consen 113 SGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDSG-------ISFF--- 182 (230)
T ss_dssp EEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGSTT-------CHCC---
T ss_pred ccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecccc-------cccc---
Confidence 69999999999999965443 3355667799999999999999998888888887666543111 1343
Q ss_pred CCCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhh
Q 002398 342 DDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEE 416 (928)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~ 416 (928)
..+..++.+++.+||++|++++++....++.++ .++++++|+++.+|.
T Consensus 183 -----------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 -----------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp -----------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred -----------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 278888999999999999999999999999998 789999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=203.95 Aligned_cols=98 Identities=33% Similarity=0.521 Sum_probs=90.9
Q ss_pred ccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHH
Q 002398 687 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKS 766 (928)
Q Consensus 687 ~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (928)
.++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..+|..+++++||..
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~------------------------- 168 (215)
T PF00702_consen 114 VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD------------------------- 168 (215)
T ss_dssp ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------
T ss_pred ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------
Confidence 3789999999999999999999999999999999999999999999999999931
Q ss_pred HHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEec--CcccH--HHHH
Q 002398 767 AAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQK--ALVT 842 (928)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~--sp~qK--~~iV 842 (928)
..+++++ +|++| ..++
T Consensus 169 ------------------------------------------------------------~~v~a~~~~kP~~k~~~~~i 188 (215)
T PF00702_consen 169 ------------------------------------------------------------SIVFARVIGKPEPKIFLRII 188 (215)
T ss_dssp ------------------------------------------------------------EEEEESHETTTHHHHHHHHH
T ss_pred ------------------------------------------------------------ccccccccccccchhHHHHH
Confidence 2499999 99999 9999
Q ss_pred HHHhhcCCCeEEEEcCCccCHHHHHhCc
Q 002398 843 RLVKTKTSSTTLAIGDGANDVGMLQEAD 870 (928)
Q Consensus 843 ~~l~~~~~~~vl~iGDG~ND~~ml~~Ad 870 (928)
+.++. .+..|+|||||.||++|+++||
T Consensus 189 ~~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 189 KELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 99985 4569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-14 Score=125.15 Aligned_cols=90 Identities=33% Similarity=0.554 Sum_probs=70.8
Q ss_pred hhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceE
Q 002398 513 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 592 (928)
Q Consensus 513 ~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 592 (928)
++||++....++.....+ ..|+|+|.||+.|+...|..+.. ...+..|++++.+||+|+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589998876554333322 56899999999999998654321 1235789999999999999999
Q ss_pred EEEEEeCCCeEEEEEecCcHHHHHHHhh
Q 002398 593 SVIVRSEEGTLLLLSKGADSVMFERLAE 620 (928)
Q Consensus 593 sviv~~~~g~~~l~~KGa~~~i~~~~~~ 620 (928)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3456888999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=121.60 Aligned_cols=126 Identities=24% Similarity=0.393 Sum_probs=107.8
Q ss_pred ceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHH
Q 002398 689 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 768 (928)
Q Consensus 689 l~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (928)
+...+.++---+|=++++++|++|++. ++++++|||..-+....|.-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567788888889999999999999999 99999999999999999999997431
Q ss_pred HHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc
Q 002398 769 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 848 (928)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~ 848 (928)
.+++-..|+.|+.+++.|++
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 18888899999999999998
Q ss_pred CCCeEEEEcCCccCHHHHHhCceeEEEcCcch--hhHhHhcceecccccccchhh
Q 002398 849 TSSTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~--~~a~~~aD~vi~~f~~l~~ll 901 (928)
.++.|.|+|||+||..||++||+||..-+.++ ..+..+||+++.+..-+..++
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 88999999999999999999999996544444 235589999998876655553
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-10 Score=125.49 Aligned_cols=202 Identities=13% Similarity=0.109 Sum_probs=109.0
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCC---------Ccccc
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET---------PESKT 758 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~---------~~~~~ 758 (928)
|.||+.- ...+.+.+.++|++|+++|++++++|||+...+..+.+++++.....+.+..||.. .....
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 5555532 23588999999999999999999999999999999999998743222333333322 11122
Q ss_pred ccchhhHHHHHHHHHHhhHHHhhhhhh-------------------hccc-----CC-CCC--CCeEEEEechhhHHHhH
Q 002398 759 LEKSEDKSAAAAALKASVLHQLIRGKE-------------------LLDS-----SN-ESL--GPLALIIDGKSLTYALE 811 (928)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~-----~~-~~~--~~~~lvi~g~~l~~~l~ 811 (928)
+..+.....+................. .+.. .. ... ....+++........+.
T Consensus 88 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 167 (270)
T PRK10513 88 LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAAI 167 (270)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHHH
Confidence 222222222221111010000000000 0000 00 000 01112222111100111
Q ss_pred HHHHHHHHH-HhhcCCeEEEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhH
Q 002398 812 DDVKDLFLE-LAIGCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVM 885 (928)
Q Consensus 812 ~~~~~~~~~-~~~~~~~~v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~ 885 (928)
..+...+.. +........+..++|. .|+..++.+.++.| ..|++||||.||++||+.|++||||. +....+|.
T Consensus 168 ~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~ 246 (270)
T PRK10513 168 ARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKE 246 (270)
T ss_pred HHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHH
Confidence 112111110 0000000113345554 69999998887655 57999999999999999999999995 44555999
Q ss_pred hcceeccc
Q 002398 886 SSDIAIAQ 893 (928)
Q Consensus 886 ~aD~vi~~ 893 (928)
.||++..+
T Consensus 247 ~A~~vt~~ 254 (270)
T PRK10513 247 VAQFVTKS 254 (270)
T ss_pred hcCeeccC
Confidence 99999865
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-10 Score=124.84 Aligned_cols=201 Identities=15% Similarity=0.089 Sum_probs=107.8
Q ss_pred cceEeeeeeccc-cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc----cCCceEEE-EeCCCCccccccc
Q 002398 688 NLILLGATAVED-KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVI-ISSETPESKTLEK 761 (928)
Q Consensus 688 dl~llG~~~i~D-~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~-~~~~~~~~~~~~~ 761 (928)
|.||+. .| .+.+.+.++|++|++.|++++++|||+...+..+.+++++. ..++..+. .++.......+..
T Consensus 10 DGTLl~----~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~ 85 (272)
T PRK15126 10 DGTLLM----PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPA 85 (272)
T ss_pred CCcCcC----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCH
Confidence 555553 33 58899999999999999999999999999999999999873 22222222 1111111222222
Q ss_pred hhhHHHHHHHHHHhhHHHhhhhh--------h-----------hccc---C--CCCCCCeEEEEechhhHHHhHHHHHHH
Q 002398 762 SEDKSAAAAALKASVLHQLIRGK--------E-----------LLDS---S--NESLGPLALIIDGKSLTYALEDDVKDL 817 (928)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~--------~-----------~~~~---~--~~~~~~~~lvi~g~~l~~~l~~~~~~~ 817 (928)
+...+.+...........+.... . .+.. . ........+++....-...+...+.+.
T Consensus 86 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~ 165 (272)
T PRK15126 86 DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEA 165 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHH
Confidence 22223222211110000000000 0 0000 0 000001111221111111111122222
Q ss_pred HHH-HhhcCCeEEEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcce--
Q 002398 818 FLE-LAIGCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI-- 889 (928)
Q Consensus 818 ~~~-~~~~~~~~v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~-- 889 (928)
+.. +.......-+..++|. .|+..++.+.++.| ..|++||||.||++||+.|+.||||. +...++|.+||+
T Consensus 166 ~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~ 244 (272)
T PRK15126 166 LGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLP 244 (272)
T ss_pred hcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCe
Confidence 210 0000000013456665 59999999987655 57999999999999999999999994 455569999997
Q ss_pred eccc
Q 002398 890 AIAQ 893 (928)
Q Consensus 890 vi~~ 893 (928)
++.+
T Consensus 245 v~~~ 248 (272)
T PRK15126 245 VIGH 248 (272)
T ss_pred ecCC
Confidence 5543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.1e-10 Score=120.97 Aligned_cols=191 Identities=17% Similarity=0.233 Sum_probs=106.9
Q ss_pred eeeecccc-CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCC-------Cccccccchhh
Q 002398 693 GATAVEDK-LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET-------PESKTLEKSED 764 (928)
Q Consensus 693 G~~~i~D~-lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~-------~~~~~~~~~~~ 764 (928)
|++.-.+. +.+.+.++|+++++.|++++++|||+...+..+.+++++.. .++..||.. .....++....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~ 88 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDV 88 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHH
Confidence 44444554 89999999999999999999999999999999999999753 344444332 22222222222
Q ss_pred HHHHHHHHHHhhH-HHhhhhhh-hcccCC--------C------------CCCC-eEEEEe--chhhHHHhHHHHHHHHH
Q 002398 765 KSAAAAALKASVL-HQLIRGKE-LLDSSN--------E------------SLGP-LALIID--GKSLTYALEDDVKDLFL 819 (928)
Q Consensus 765 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~--------~------------~~~~-~~lvi~--g~~l~~~l~~~~~~~~~ 819 (928)
...+......... ........ .+.... . .... ..+.+. .+.+.. +...+.+.+.
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 167 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEE-LVEALRKRFP 167 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHH-HHHHHhhhcc
Confidence 2222222111000 00000000 000000 0 0000 001111 111111 1111222221
Q ss_pred HHhhcCCeEEEEe-------cCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhc
Q 002398 820 ELAIGCASVICCR-------SSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 887 (928)
Q Consensus 820 ~~~~~~~~~v~~r-------~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~a 887 (928)
. ....+.+ ..|. +|+..++.+.++.| ..|++|||+.||++||+.|+.||+|.+. ...++..|
T Consensus 168 ~-----~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A 241 (264)
T COG0561 168 D-----LGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELA 241 (264)
T ss_pred c-----cceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhC
Confidence 1 1223333 3343 79999998887655 3599999999999999999999999555 66699999
Q ss_pred ceeccc
Q 002398 888 DIAIAQ 893 (928)
Q Consensus 888 D~vi~~ 893 (928)
|++...
T Consensus 242 ~~vt~~ 247 (264)
T COG0561 242 DYVTTS 247 (264)
T ss_pred CcccCC
Confidence 977554
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.4e-10 Score=120.96 Aligned_cols=192 Identities=16% Similarity=0.154 Sum_probs=102.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc----cCCceEEE-EeCCCCccccccchhhHHHHHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVI-ISSETPESKTLEKSEDKSAAAAALKA 774 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (928)
.+.+.+.++|++|+++|++++++|||+...+..+.+.+++. ..++..+. .++.......+..+...+.+......
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 48899999999999999999999999999999999999863 22222222 11211122223332222222221110
Q ss_pred -hhHHHhhhhhhh------------ccc----------CC--CCCCCeEEEEech--hhHHHhHHHHHHHHHH-HhhcCC
Q 002398 775 -SVLHQLIRGKEL------------LDS----------SN--ESLGPLALIIDGK--SLTYALEDDVKDLFLE-LAIGCA 826 (928)
Q Consensus 775 -~~~~~~~~~~~~------------~~~----------~~--~~~~~~~lvi~g~--~l~~~l~~~~~~~~~~-~~~~~~ 826 (928)
.....+...... ... .. .......++..++ .+. .+.+.+.+.+.. +.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~s 177 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLL-PLEQAINARWGDRVNVSFS 177 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHH-HHHHHHHHHhCCcEEEEEe
Confidence 000000000000 000 00 0000111122111 111 111122222210 000000
Q ss_pred eEEEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcc--eeccc
Q 002398 827 SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--IAIAQ 893 (928)
Q Consensus 827 ~~v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD--~vi~~ 893 (928)
...+..+.|. .|+..++.+.++.| ..|++||||.||++||+.|+.||||. +....+|..|| +++..
T Consensus 178 ~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~ 250 (266)
T PRK10976 178 TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGS 250 (266)
T ss_pred CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeeccc
Confidence 0123455665 69999999887655 57999999999999999999999995 44555899988 56653
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.5e-09 Score=126.33 Aligned_cols=200 Identities=17% Similarity=0.183 Sum_probs=108.8
Q ss_pred ccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCC------ceEEEEeCC--------
Q 002398 687 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG------MRQVIISSE-------- 752 (928)
Q Consensus 687 ~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~------~~~~~~~~~-------- 752 (928)
-|.||+.- .-.+-+.+.++|++|+++|++++++|||+...+..+.+++++.... .+.+..||.
T Consensus 315 LDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~ 391 (580)
T PLN02887 315 MDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGR 391 (580)
T ss_pred CCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCc
Confidence 36666631 2248899999999999999999999999999999999988764211 112222322
Q ss_pred CCccccccchhhHHHHHHHHHHhhHHHhhhhhh---------------hcccCC------------CCCCCeEEEEechh
Q 002398 753 TPESKTLEKSEDKSAAAAALKASVLHQLIRGKE---------------LLDSSN------------ESLGPLALIIDGKS 805 (928)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~------------~~~~~~~lvi~g~~ 805 (928)
......+..+...+.+...........+..... .+.... .......+++....
T Consensus 392 ~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e 471 (580)
T PLN02887 392 EIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAE 471 (580)
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChH
Confidence 111222333333333332211111000000000 000000 00001111221111
Q ss_pred -hHHHhHHHHHHHHHHHhhcCCeE----EEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEE
Q 002398 806 -LTYALEDDVKDLFLELAIGCASV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGI 875 (928)
Q Consensus 806 -l~~~l~~~~~~~~~~~~~~~~~~----v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~ 875 (928)
....+...+.+.+. ..+..+ .+..+.|. .|+..++.+.++.| ..|++||||.||++||+.|++||||
T Consensus 472 ~~~~~l~~~l~~~~~---~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM 548 (580)
T PLN02887 472 GVSSVLRPYWSEATG---DRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL 548 (580)
T ss_pred HHHHHHHHHHHHHhc---CcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe
Confidence 11111111222211 011100 13344554 69999999987655 5799999999999999999999999
Q ss_pred cCcchhhHhHhcceeccc
Q 002398 876 SGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 876 ~g~~~~~a~~~aD~vi~~ 893 (928)
. +....+|..||+|..+
T Consensus 549 g-NA~eeVK~~Ad~VT~s 565 (580)
T PLN02887 549 S-NGAEKTKAVADVIGVS 565 (580)
T ss_pred C-CCCHHHHHhCCEEeCC
Confidence 4 4455599999998864
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-09 Score=115.44 Aligned_cols=193 Identities=16% Similarity=0.145 Sum_probs=109.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCC--------CccccccchhhHHHHHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET--------PESKTLEKSEDKSAAAA 770 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 770 (928)
..+.+.+.++|++|+++|++++++|||+...+..+..++++. .+.+..+|.. .....++.+.....+..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheeeh
Confidence 457799999999999999999999999999999999999864 2233222222 12222332333333333
Q ss_pred HHHHhhHHHhhhhhhhcccCC--------------------------CCCCCeEEEEechhhHHHhHHHHHHHHHHHh-h
Q 002398 771 ALKASVLHQLIRGKELLDSSN--------------------------ESLGPLALIIDGKSLTYALEDDVKDLFLELA-I 823 (928)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~-~ 823 (928)
.........+......+.... ..............-...+.+++.+.+.... .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 332221111110000000000 0011111222222222223334444443221 0
Q ss_pred cCCeEEEEecCc--ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 824 GCASVICCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 824 ~~~~~v~~r~sp--~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
....--+..++| -.|+..++.+.++.+ +.+++|||+.||.+||+.|+.||+|.++ ....+..||+++..-+
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na-~~~~k~~a~~i~~~~~ 246 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNA-TPELKKAADYITPSNN 246 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS--HHHHHHSSEEESSGT
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCC-CHHHHHhCCEEecCCC
Confidence 000011223444 369999988876544 6899999999999999999999999544 4458999999887633
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=5e-09 Score=110.15 Aligned_cols=182 Identities=17% Similarity=0.176 Sum_probs=100.7
Q ss_pred ccc-CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCC------ccccccc-hhhHHHHH
Q 002398 698 EDK-LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP------ESKTLEK-SEDKSAAA 769 (928)
Q Consensus 698 ~D~-lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~ 769 (928)
.|. +.+.+.++|++|++.|++++++|||+...+..+++.+++.. +++..+|... ....... ....+.+.
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~ 93 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIEECEKAYS 93 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchHHHHHHHH
Confidence 444 78899999999999999999999999999999999998631 2333333211 0000000 11111111
Q ss_pred HHHHHhhHHHhhhhhhhcccCCCCCCCeEE-EEechhhHHHhHHHHHHHHHHHhh---cCCeEEEEecCcc--cHHHHHH
Q 002398 770 AALKASVLHQLIRGKELLDSSNESLGPLAL-IIDGKSLTYALEDDVKDLFLELAI---GCASVICCRSSPK--QKALVTR 843 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-vi~g~~l~~~l~~~~~~~~~~~~~---~~~~~v~~r~sp~--qK~~iV~ 843 (928)
... . ........+...........+ +...... +.+.+.+..... ...+..+....|. .|+..++
T Consensus 94 ~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~ 163 (230)
T PRK01158 94 ELK-K----RFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLK 163 (230)
T ss_pred HHH-H----hccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHH
Confidence 110 0 000000000000000000111 1112111 112222211110 0011123455555 4998888
Q ss_pred HHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 844 LVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 844 ~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
.+.++.+ ..+++|||+.||++|++.|++||+|.+ ....+|..||++..+
T Consensus 164 ~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N-a~~~vk~~a~~v~~~ 215 (230)
T PRK01158 164 KLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVAN-ADEELKEAADYVTEK 215 (230)
T ss_pred HHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecC-ccHHHHHhcceEecC
Confidence 8876544 579999999999999999999999954 445589999998864
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.3e-09 Score=111.05 Aligned_cols=183 Identities=14% Similarity=0.123 Sum_probs=98.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccc-----cccchhhHHHHHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK-----TLEKSEDKSAAAAALKA 774 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 774 (928)
.+.+.+.++|++|++.||+++++|||+...+..+++.+++. .+.+..+|...... .................
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 47788999999999999999999999999999999999842 23333333311100 00000000000000000
Q ss_pred hhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcc--cHHHHHHHHhhcCC--
Q 002398 775 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK--QKALVTRLVKTKTS-- 850 (928)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~--qK~~iV~~l~~~~~-- 850 (928)
.. .....+............+........ + ..+.+.+......+....+....|. .|+..++.+.++.+
T Consensus 92 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 164 (225)
T TIGR01482 92 KT-----FPFSRLKVQYPRRASLVKMRYGIDVDT-V-REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK 164 (225)
T ss_pred cc-----cchhhhccccccccceEEEeecCCHHH-H-HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC
Confidence 00 000000000000111111111111111 1 1111121100000001123344453 79988888876544
Q ss_pred -CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 851 -STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 851 -~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
..+++|||+.||++|++.|++||+|.+ ....++..||++..+
T Consensus 165 ~~~~i~~GD~~NDi~m~~~ag~~vam~N-a~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 165 PGETLVCGDSENDIDLFEVPGFGVAVAN-AQPELKEWADYVTES 207 (225)
T ss_pred HHHEEEECCCHhhHHHHHhcCceEEcCC-hhHHHHHhcCeecCC
Confidence 579999999999999999999999954 445589999999764
|
catalyze the same reaction as SPP. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.4e-08 Score=104.02 Aligned_cols=123 Identities=22% Similarity=0.235 Sum_probs=91.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
.++.+++.+.++.++++|++||++||-...-+..+|+.+|+...-...+...+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999997644433332221
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLA 855 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~vl~ 855 (928)
+++|. ++.-.+..+.|...++.+.+..| +.+.+
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 12221 12233445679988866655345 46999
Q ss_pred EcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 856 iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
+|||.||.|||+.|+.+|++..... ....|+..+..
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~~~ 201 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRIWP 201 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhcCh
Confidence 9999999999999999999966654 44555554433
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-08 Score=110.51 Aligned_cols=56 Identities=23% Similarity=0.341 Sum_probs=46.9
Q ss_pred cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
.|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+ ....++..||+++.+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgn-a~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGN-ADDAVKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecC-chHHHHHhCCEEEec
Confidence 69988887766555 579999999999999999999999954 445588999999865
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.9e-09 Score=107.31 Aligned_cols=178 Identities=17% Similarity=0.187 Sum_probs=99.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCc----cccccchhhHHHHHHHHHHh
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE----SKTLEKSEDKSAAAAALKAS 775 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 775 (928)
++.+.+.++|++|++.|++++++||++...+..+++.+++.. +.+..+|.... ..................
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~-- 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKK-- 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccchhhHHHhhh--
Confidence 488999999999999999999999999999999999987632 22322322111 111111100000100000
Q ss_pred hHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhh-cCCeEEEEecCc--ccHHHHHHHHhhcCC--
Q 002398 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI-GCASVICCRSSP--KQKALVTRLVKTKTS-- 850 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~-~~~~~v~~r~sp--~qK~~iV~~l~~~~~-- 850 (928)
... ....+.. ........+..+...... +...+..... ...+..+..++| ..|+..++.+.+..+
T Consensus 93 --~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 --KRF--PRDRLSN-EYPRASLVIMREGKDVDE-----VREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred --hhh--hhhhccc-ccceeEEEEecCCccHHH-----HHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 000 0000000 000111222223322221 1111111100 000001234444 479999988876544
Q ss_pred -CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 851 -STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 851 -~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
..+++|||+.||++|++.|++||+|.+ ...+++..||++...
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~n-a~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVAN-ADDQLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCC-ccHHHHHhCCEEcCC
Confidence 469999999999999999999999954 455699999999864
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.3e-08 Score=107.71 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=99.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCc--------------cccccchhhHH
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE--------------SKTLEKSEDKS 766 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 766 (928)
+-+.+.++|++|+++||+++++|||+...+..+++++|+.. .+.+..||.... ...+..+...+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQ 102 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHH
Confidence 45779999999999999999999999999999999998731 233434433211 11122222233
Q ss_pred HHHHHHHH-hhHH---------Hhhhh----hhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCe---EE
Q 002398 767 AAAAALKA-SVLH---------QLIRG----KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCAS---VI 829 (928)
Q Consensus 767 ~~~~~~~~-~~~~---------~~~~~----~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~---~v 829 (928)
.+...... .... ..... ...............+.+.+... .+ ..+.+.+... .+.. ..
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~--~~~~~~~~~ 177 (271)
T PRK03669 103 VLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAEL--GLQFVQGAR 177 (271)
T ss_pred HHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHC--CCEEEecCe
Confidence 33322111 0000 00000 00000000001111122222110 01 1122222210 1111 12
Q ss_pred EEecCcc--cHHHHHHHHhhcCC------CeEEEEcCCccCHHHHHhCceeEEEcCcc-hh-h---HhHhcceeccc
Q 002398 830 CCRSSPK--QKALVTRLVKTKTS------STTLAIGDGANDVGMLQEADIGVGISGVE-GM-Q---AVMSSDIAIAQ 893 (928)
Q Consensus 830 ~~r~sp~--qK~~iV~~l~~~~~------~~vl~iGDG~ND~~ml~~AdvGIa~~g~~-~~-~---a~~~aD~vi~~ 893 (928)
+..+.|. .|+..++.+.++.| ..|++||||.||++||+.|++||||.+.. .. . .+..||++...
T Consensus 178 ~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 178 FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 4456664 69998988877533 57999999999999999999999996433 11 1 23367776654
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=108.03 Aligned_cols=190 Identities=19% Similarity=0.155 Sum_probs=104.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc----cCCceEEEEe-CCCCccccccchhhHHHHHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIIS-SETPESKTLEKSEDKSAAAAALKA 774 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 774 (928)
++.+++.++|++|++.|++++++|||+...+..+.+++++. ..++..+... ++......+..+.....+......
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 48889999999999999999999999999999999988763 2233333222 111222233333333333332221
Q ss_pred hhHHHhhhhhhhcccCC--------------------C-----CCCCeEEEEechhhHHHhHHHHHHHHHH--HhhcCCe
Q 002398 775 SVLHQLIRGKELLDSSN--------------------E-----SLGPLALIIDGKSLTYALEDDVKDLFLE--LAIGCAS 827 (928)
Q Consensus 775 ~~~~~~~~~~~~~~~~~--------------------~-----~~~~~~lvi~g~~l~~~l~~~~~~~~~~--~~~~~~~ 827 (928)
.....+......+.... . ......+.+....-. .+.+.+.+.. .......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 172 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPED---LDLLIEALNKLELEENVSV 172 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHH---HHHHHHHhhhhhhcCCEEE
Confidence 11100000000000000 0 000011111111100 0112222221 0000110
Q ss_pred ----EEEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 828 ----VICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 828 ----~v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
..+..+.|. .|+..++.+.+..+ ..+++|||+.||++|++.|++|++|.+ ....++..||+++..
T Consensus 173 ~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~n-a~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 173 VSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGN-ADEELKALADYVTDS 246 (256)
T ss_pred EEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecC-chHHHHHhCCEEecC
Confidence 113345554 59999998877544 579999999999999999999999954 445589999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.9e-08 Score=109.52 Aligned_cols=132 Identities=22% Similarity=0.228 Sum_probs=93.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.+.|+.|++.|++++++||.....+..+..++|+...-...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 57899999999999999999999999988888888888884311111111100
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEE-ecCcccHHHHHHHHhhcCC---CeEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTS---STTLA 855 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~-r~sp~qK~~iV~~l~~~~~---~~vl~ 855 (928)
.++|. +.. -+..+.|..+++.+.+..| ..|+|
T Consensus 234 --------------------~ltg~------------------------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIa 269 (322)
T PRK11133 234 --------------------KLTGN------------------------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVA 269 (322)
T ss_pred --------------------EEEeE------------------------ecCccCCcccHHHHHHHHHHHcCCChhhEEE
Confidence 01110 110 1234678888888776444 68999
Q ss_pred EcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccccchhhhcch
Q 002398 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHG 905 (928)
Q Consensus 856 iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l~~lll~~g 905 (928)
||||.||++|++.|++||++...+ ..+..||+++. +..|..+|...|
T Consensus 270 VGDg~NDl~m~~~AGlgiA~nAkp--~Vk~~Ad~~i~-~~~l~~~l~~~~ 316 (322)
T PRK11133 270 IGDGANDLPMIKAAGLGIAYHAKP--KVNEQAQVTIR-HADLMGVLCILS 316 (322)
T ss_pred EECCHHHHHHHHHCCCeEEeCCCH--HHHhhCCEEec-CcCHHHHHHHhc
Confidence 999999999999999999994443 38899999996 444544444333
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.2e-08 Score=100.91 Aligned_cols=113 Identities=19% Similarity=0.143 Sum_probs=83.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.+.|+.||+.| ++.|+||-....+..+++.+|+..--...+.+++..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999853111111111000
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCC
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG 859 (928)
.++|. .. ..+..|..+++.+++ .+..++++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11111 11 346789999999876 67789999999
Q ss_pred ccCHHHHHhCceeEEEcCcchhhHhHhcc
Q 002398 860 ANDVGMLQEADIGVGISGVEGMQAVMSSD 888 (928)
Q Consensus 860 ~ND~~ml~~AdvGIa~~g~~~~~a~~~aD 888 (928)
.||++|++.|++||++..++. .+.+||
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~--~~~~~~ 180 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPEN--VIREFP 180 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHH--HHHhCC
Confidence 999999999999999987776 344444
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.7e-08 Score=103.25 Aligned_cols=188 Identities=11% Similarity=0.080 Sum_probs=98.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc----cCCceEEEEeCCCC-------ccccccchhhHHHHH
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETP-------ESKTLEKSEDKSAAA 769 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 769 (928)
.-+.+.++|++|++.|++++++|||+...+..+.+++|+. ..++..+...+... ....+..+...+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 4456999999999999999999999999999999999863 33443333222111 111223222333333
Q ss_pred HHHHH-hhHHHhhhh-------------hhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhc-CCeEEEEecC
Q 002398 770 AALKA-SVLHQLIRG-------------KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSS 834 (928)
Q Consensus 770 ~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~-~~~~v~~r~s 834 (928)
..... ......... ...............++. ...... .+.+.+...... ..+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERRE----RFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHHH----HHHHHHHHcCCEEEeCCceEEEe
Confidence 21111 000000000 000000000111112222 221111 122222211000 0001133344
Q ss_pred cc--cHHHHHHHHhhcC-----CCeEEEEcCCccCHHHHHhCceeEEEcCcch--hhHhHh--c-ceeccc
Q 002398 835 PK--QKALVTRLVKTKT-----SSTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMS--S-DIAIAQ 893 (928)
Q Consensus 835 p~--qK~~iV~~l~~~~-----~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~--~~a~~~--a-D~vi~~ 893 (928)
|. .|+..++.+.++. ...+++|||+.||.+|++.|++||+|.+... ...+.. | +++...
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 43 6988888776653 4569999999999999999999999966542 346665 4 476543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.7e-07 Score=97.02 Aligned_cols=197 Identities=13% Similarity=0.095 Sum_probs=102.5
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCcccc--ccchhhH
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT--LEKSEDK 765 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~--~~~~~~~ 765 (928)
|.||+.---=..++.+...++|+++++.|+.++++||++...+..+.+++++..+. ..+..+|....... .......
T Consensus 9 DGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~ 87 (249)
T TIGR01485 9 DNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWA 87 (249)
T ss_pred CCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHH
Confidence 55666211013567799999999999999999999999999999999999876543 23333333211100 0011111
Q ss_pred HHHHHHHHHhhHHHhhhhhhhcccC---CCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEE----EEecCc--c
Q 002398 766 SAAAAALKASVLHQLIRGKELLDSS---NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI----CCRSSP--K 836 (928)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v----~~r~sp--~ 836 (928)
..+...........+......+... ........+....+..... ...+.+.+......+..+. +..+.| .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~ 166 (249)
T TIGR01485 88 EYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGS 166 (249)
T ss_pred HHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCC
Confidence 1111110000000011011111111 1112223333332221211 1223333332211222111 123454 3
Q ss_pred cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHh-CceeEEEcCcchhhHhHhc
Q 002398 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQE-ADIGVGISGVEGMQAVMSS 887 (928)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~-AdvGIa~~g~~~~~a~~~a 887 (928)
.|+..++.+.+..+ ..|+++||+.||++|++. ++.||+|.+.. ...+..+
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~-~~~k~~~ 220 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ-EELLQWY 220 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH-HHHHHHH
Confidence 79999998876543 689999999999999998 67999995543 3355443
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.8e-07 Score=96.09 Aligned_cols=124 Identities=22% Similarity=0.284 Sum_probs=87.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++++.|+.|++.|+++.|+||.....+..+.+.+|+..--...+..++.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999999985311111111100
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEe-cCcccHHHHHHHHhhcCC---CeEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 855 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r-~sp~qK~~iV~~l~~~~~---~~vl~ 855 (928)
.++|. +.++ ..+..|..+++.+.+..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 123346666665544333 46999
Q ss_pred EcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc
Q 002398 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 856 iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
|||+.+|+.|++.|+++|++.+.+. +..+||++|.+.++
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~ 212 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKDL 212 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCCH
Confidence 9999999999999999999976554 77899999987554
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.6e-07 Score=95.14 Aligned_cols=42 Identities=7% Similarity=0.060 Sum_probs=38.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
.+..-+++.++|++|++.|++++++||++...+..+..++|+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 455667899999999999999999999999999999999996
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.3e-07 Score=97.28 Aligned_cols=50 Identities=14% Similarity=0.061 Sum_probs=42.0
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
|.||+.- ...+.+.+.++|++|++.|++++++||++...+..+++++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 5555531 3356678999999999999999999999999999999999874
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.5e-07 Score=93.93 Aligned_cols=177 Identities=15% Similarity=0.146 Sum_probs=91.0
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCcc-ccccchhhH-HHHHHH-HHHhhHHHhhh
Q 002398 706 PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES-KTLEKSEDK-SAAAAA-LKASVLHQLIR 782 (928)
Q Consensus 706 ~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 782 (928)
.++++ +++.|++++++|||+...+..+...+++..+. .++..+|..... ......... ..+... ......... .
T Consensus 21 ~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 97 (236)
T TIGR02471 21 VELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEAL-A 97 (236)
T ss_pred HHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHH-h
Confidence 35665 68999999999999999999999999874222 333333332100 000000000 000000 000001001 0
Q ss_pred hhhhcccCCCC---CCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEE----ecCcc--cHHHHHHHHhhcCC---
Q 002398 783 GKELLDSSNES---LGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC----RSSPK--QKALVTRLVKTKTS--- 850 (928)
Q Consensus 783 ~~~~~~~~~~~---~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~----r~sp~--qK~~iV~~l~~~~~--- 850 (928)
....+..+... .....+....+.... + .++...+......++.+... .+.|. .|+..++.+.++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~ 175 (236)
T TIGR02471 98 DIPGLTLQDDQEQGPFKISYLLDPEGEPI-L-PQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPL 175 (236)
T ss_pred cCCCcEeCChhcCCCeeEEEEECcccchH-H-HHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCH
Confidence 00001111111 122233333321111 1 11222222211111111211 35554 79999998877554
Q ss_pred CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcc
Q 002398 851 STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 888 (928)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD 888 (928)
..+++|||+.||.+|++.|++||+|.+ .....+..||
T Consensus 176 ~~~i~~GD~~nD~~ml~~~~~~iav~n-a~~~~k~~a~ 212 (236)
T TIGR02471 176 EQILVAGDSGNDEEMLRGLTLGVVVGN-HDPELEGLRH 212 (236)
T ss_pred HHEEEEcCCccHHHHHcCCCcEEEEcC-CcHHHHHhhc
Confidence 469999999999999999999999955 4445888999
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.7e-07 Score=87.24 Aligned_cols=96 Identities=15% Similarity=0.168 Sum_probs=73.5
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhc
Q 002398 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (928)
Q Consensus 708 ~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+|+.|++.|+++.|+||++...+..+.+.+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998742
Q ss_pred ccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC---CCeEEEEcCCccCHH
Q 002398 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAIGDGANDVG 864 (928)
Q Consensus 788 ~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~---~~~vl~iGDG~ND~~ 864 (928)
.+.. ...|...++.+.+.. ...++++||+.||++
T Consensus 70 -----------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 70 -----------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -----------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 0110 123444444443322 367999999999999
Q ss_pred HHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 865 ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
|++.|++++++..... ..+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~-~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHP-LLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCH-HHHHhCCEEecC
Confidence 9999999999965543 378889998864
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.9e-06 Score=89.94 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=39.5
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCC
Q 002398 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 752 (928)
Q Consensus 703 ~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~ 752 (928)
+.+.++|++|+++||+++++||++...+..+.+.+++.. .+.+..||.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa 66 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGA 66 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCc
Confidence 348999999999999999999999999999999999731 344555544
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.4e-07 Score=87.28 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=74.1
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhh
Q 002398 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (928)
Q Consensus 707 ~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
..|+.|++.|+++.|+|+.+...+......+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 68999999999999999999999999999999852
Q ss_pred cccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC---CCeEEEEcCCccCH
Q 002398 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAIGDGANDV 863 (928)
Q Consensus 787 ~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~---~~~vl~iGDG~ND~ 863 (928)
.|....| |...++.+.+.. ...+++|||+.||+
T Consensus 76 ------------------------------------------~f~~~kp--kp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 76 ------------------------------------------FHEGIKK--KTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred ------------------------------------------EEecCCC--CHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 1111112 223333332222 35799999999999
Q ss_pred HHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 864 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 864 ~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
+|++.|+++++|.+.. ..++..|+++...
T Consensus 112 ~~~~~ag~~~am~nA~-~~lk~~A~~I~~~ 140 (169)
T TIGR02726 112 SMMKRVGLAVAVGDAV-ADVKEAAAYVTTA 140 (169)
T ss_pred HHHHHCCCeEECcCch-HHHHHhCCEEcCC
Confidence 9999999999996554 4589999998863
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.8e-06 Score=97.71 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=35.7
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
.-+.+.++|++|+++||.++++||+....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 445789999999999999999999999999999999985
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.9e-06 Score=91.27 Aligned_cols=57 Identities=21% Similarity=0.345 Sum_probs=42.3
Q ss_pred EecCcc--cHHHHHHHHhhcCCCeEEEEcC----CccCHHHHHhC-ceeEEEcCcchhhHhHhcce
Q 002398 831 CRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEA-DIGVGISGVEGMQAVMSSDI 889 (928)
Q Consensus 831 ~r~sp~--qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~A-dvGIa~~g~~~~~a~~~aD~ 889 (928)
..+.|. +|+..++.|.++ ...|++||| |.||++||+.| -.|+++.+++. ..+..+.+
T Consensus 180 leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~-~~~~~~~~ 243 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED-TIKILKEL 243 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH-HHHHHHHH
Confidence 345553 799999999884 689999999 99999999976 56777755543 25555443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.9e-06 Score=94.32 Aligned_cols=180 Identities=12% Similarity=0.090 Sum_probs=93.7
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCcc-cccc-chhhHHHHHHHHHHhhHHHhh
Q 002398 705 VPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES-KTLE-KSEDKSAAAAALKASVLHQLI 781 (928)
Q Consensus 705 ~~~~I-~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 781 (928)
...++ +++++.|+.++++|||++..+..+.++.++..+.. ++..+|..... ..+. ...-...+.............
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~-~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDI-TIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCE-EEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 44455 88899999999999999999999999999876642 22223321100 0011 111111111111100000000
Q ss_pred hhhhhcc--cCC-CCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeE----EEEecCcc--cHHHHHHHHhhcC---
Q 002398 782 RGKELLD--SSN-ESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV----ICCRSSPK--QKALVTRLVKTKT--- 849 (928)
Q Consensus 782 ~~~~~~~--~~~-~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~----v~~r~sp~--qK~~iV~~l~~~~--- 849 (928)
.....+. ... ....+..+..+.+.... +...+.+.+......+..+ .+..+.|. .|+..++.|.++.
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 0000011 111 11222333333322222 1223444443211111111 23456665 5999999887754
Q ss_pred C---CeEEEEcCCccCHHHHHhCc-eeEEEcCcchhhHhHhc
Q 002398 850 S---STTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVMSS 887 (928)
Q Consensus 850 ~---~~vl~iGDG~ND~~ml~~Ad-vGIa~~g~~~~~a~~~a 887 (928)
| ..|++|||+.||++||+.|+ .||+|++. ....+..+
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA-~~elk~~a 231 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA-QEELLQWY 231 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC-cHHHHHHH
Confidence 3 58999999999999999999 69999554 33466543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.8e-06 Score=86.23 Aligned_cols=42 Identities=10% Similarity=-0.012 Sum_probs=38.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
+..-+.+.++|++|++.||.++++||+....+..+.+++++.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346677999999999999999999999999999999999973
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=2e-06 Score=86.56 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=73.6
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhh
Q 002398 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (928)
Q Consensus 707 ~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
.+|+.|++.|+++.++||++...+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999998742
Q ss_pred cccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeEEEEcCCccCH
Q 002398 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 863 (928)
Q Consensus 787 ~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~vl~iGDG~ND~ 863 (928)
+|. ....|...++.+.+..+ ..|++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 111 12235544444433233 5799999999999
Q ss_pred HHHHhCceeEEEcCcchhhHhHhcceecc
Q 002398 864 GMLQEADIGVGISGVEGMQAVMSSDIAIA 892 (928)
Q Consensus 864 ~ml~~AdvGIa~~g~~~~~a~~~aD~vi~ 892 (928)
.|++.|++++++.. ....++..||+++.
T Consensus 126 ~~a~~aG~~~~v~~-~~~~~~~~a~~v~~ 153 (183)
T PRK09484 126 PVMEKVGLSVAVAD-AHPLLLPRADYVTR 153 (183)
T ss_pred HHHHHCCCeEecCC-hhHHHHHhCCEEec
Confidence 99999999998843 33446788999985
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.4e-07 Score=85.37 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=87.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCce--EEEE--eCCCCccccccchhhHHHHHHHHHHh
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR--QVII--SSETPESKTLEKSEDKSAAAAALKAS 775 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (928)
.+-+++++.++.|++.|.++.++||--...+.++|.++||...+.+ .+.+ +|+-..
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-------------------- 147 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-------------------- 147 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc--------------------
Confidence 4679999999999999999999999999999999999999764321 1111 111000
Q ss_pred hHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC-CCeEE
Q 002398 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT-SSTTL 854 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~-~~~vl 854 (928)
++... .-+...-|+.+++.+++.. -+.++
T Consensus 148 ---------------------------fd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~ 177 (227)
T KOG1615|consen 148 ---------------------------FDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIV 177 (227)
T ss_pred ---------------------------cccCC-----------------------ccccCCccHHHHHHHHhCCChheeE
Confidence 00000 0011336999999998743 36899
Q ss_pred EEcCCccCHHHHHhCceeEEEcCcch-hhHhHhcceecccccc
Q 002398 855 AIGDGANDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRF 896 (928)
Q Consensus 855 ~iGDG~ND~~ml~~AdvGIa~~g~~~-~~a~~~aD~vi~~f~~ 896 (928)
|||||+||.+|+..|+.=|+..|+.. .+.+..|+.-+.+|..
T Consensus 178 mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 178 MVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred EecCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 99999999999999877676654422 1245666665555544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.28 E-value=8.6e-06 Score=83.79 Aligned_cols=172 Identities=16% Similarity=0.185 Sum_probs=89.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC--cccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
++.+.+.++|++|++.|++++++||+....+..+..+++ ++..++..+...+...... ..+.....+... +...
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 477899999999999999999999999999999988743 4545554443322211110 001111111111 0110
Q ss_pred HHhhhhhhhcccC--CCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhc-CCeE------EEEecCc--ccHHHHHHHHh
Q 002398 778 HQLIRGKELLDSS--NESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASV------ICCRSSP--KQKALVTRLVK 846 (928)
Q Consensus 778 ~~~~~~~~~~~~~--~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~-~~~~------v~~r~sp--~qK~~iV~~l~ 846 (928)
..+......+... ........+...+..........+...+...... .... -+..+.| ..|+..++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 0000000001000 0111222222222101111111222222221100 1111 1223455 47999998887
Q ss_pred hcCC---CeEEEEcCCccCHHHHHhCceeEEE
Q 002398 847 TKTS---STTLAIGDGANDVGMLQEADIGVGI 875 (928)
Q Consensus 847 ~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~ 875 (928)
+..+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6544 5699999999999999999999987
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.3e-06 Score=84.52 Aligned_cols=118 Identities=19% Similarity=0.237 Sum_probs=80.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++|+.|++.|+++.++||-....+..+++.+|+...-...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999999642111111111000
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC---CCeEEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 856 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~---~~~vl~i 856 (928)
...+ . .+..+.|..|..+++.+.+.. ...+++|
T Consensus 134 --------------------~~~p----------------------~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP----------------------D--GIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec----------------------c--eeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 0 112244667877776665433 3569999
Q ss_pred cCCccCHHHHHhCceeEEEcCcchhhHhHhcc
Q 002398 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 888 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD 888 (928)
||+.+|++|++.|++++++.+... ....++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999944322 2444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.1e-06 Score=84.97 Aligned_cols=126 Identities=20% Similarity=0.186 Sum_probs=87.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.++++.|+++ +++.++||.....+..+...+|+...-...+...+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4579999999999999 9999999999999999999999843111111111100
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCC
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG 859 (928)
.+.|. . -..|..|..+++.++. .+..++|||||
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDS 153 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCC
Confidence 00000 0 0136678888887776 67889999999
Q ss_pred ccCHHHHHhCceeEEEcCcchhhHhHhcce-ecccccccchh
Q 002398 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDI-AIAQFRFLERL 900 (928)
Q Consensus 860 ~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~-vi~~f~~l~~l 900 (928)
.||+.|.+.|++||.....+.. ....+++ ++.++.-|..+
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 9999999999999987544332 2345565 66666554433
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.4e-06 Score=84.31 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=36.5
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 703 ~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
+++.+.|+.++++|++++|+||.....+.++++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 677799999999999999999999999999999999965
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.7e-05 Score=83.30 Aligned_cols=180 Identities=12% Similarity=0.079 Sum_probs=93.9
Q ss_pred cCCCChHHHHHHHHH-cCCeEEEEcCCChhHHHHHHHHcCc--ccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhh
Q 002398 700 KLQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACSL--LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~-aGI~v~mlTGD~~~ta~~ia~~~gi--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (928)
.+-+++.++|++|++ .|++++++|||+...+..+...+++ +..++..+.-.+.......+..+ ....+.....+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~-~~~~i~~~l~~~- 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDA-IARDISVQLHTA- 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChh-HHHHHHHHHHHH-
Confidence 456789999999998 7999999999999999988876653 33332222111110000111111 111111111110
Q ss_pred HHHhhh-hhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCC------eEEEEecCcc--cHHHHHHHHhh
Q 002398 777 LHQLIR-GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCRSSPK--QKALVTRLVKT 847 (928)
Q Consensus 777 ~~~~~~-~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~------~~v~~r~sp~--qK~~iV~~l~~ 847 (928)
... ....+ ......++........ -.+.+......+..... .--+..+.|. +|+..++.+.+
T Consensus 114 ---~~~~pg~~v-----e~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~ 184 (266)
T PRK10187 114 ---LAQLPGAEL-----EAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQ 184 (266)
T ss_pred ---hccCCCcEE-----EeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHH
Confidence 100 00000 0111222333322110 01111111112211111 1122344443 79988887766
Q ss_pred cCC---CeEEEEcCCccCHHHHHhC----ceeEEEcCcchhhHhHhcceeccccc
Q 002398 848 KTS---STTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 848 ~~~---~~vl~iGDG~ND~~ml~~A----dvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
..+ ..++++||+.||.+||+.+ +.||+|++.. ..|++.+.+-.
T Consensus 185 ~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~ 234 (266)
T PRK10187 185 EAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVP 234 (266)
T ss_pred hcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHH
Confidence 444 6799999999999999999 9999995433 35788887644
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.4e-05 Score=81.72 Aligned_cols=41 Identities=20% Similarity=0.428 Sum_probs=38.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.|++.++++.|++.|+++.|+||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999985
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.6e-05 Score=79.72 Aligned_cols=112 Identities=14% Similarity=0.168 Sum_probs=74.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-+++|++.+.++.|++.|+++.|+||.....+..+...++... .+..-+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~~--------------------------- 118 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNEA--------------------------- 118 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEecee---------------------------
Confidence 5799999999999999999999999999998988888764321 1110000
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEE-EEecCcccHHHHHHHHhhcCCCeEEEEc
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-CCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v-~~r~sp~qK~~iV~~l~~~~~~~vl~iG 857 (928)
.++|..+..... + .... +.......|..+++.++. ....++|||
T Consensus 119 ---------------------~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~~-~~~~~i~iG 163 (214)
T TIGR03333 119 ---------------------DFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLSE-PNDYHIVIG 163 (214)
T ss_pred ---------------------EeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHhh-cCCcEEEEe
Confidence 001110000000 0 0000 001113579999998876 567789999
Q ss_pred CCccCHHHHHhCceeEEE
Q 002398 858 DGANDVGMLQEADIGVGI 875 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~ 875 (928)
||.||+.|++.||++++-
T Consensus 164 Dg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 164 DSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred CCHHHHHHHHhCCeeEeh
Confidence 999999999999997764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.3e-05 Score=74.58 Aligned_cols=97 Identities=14% Similarity=0.185 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhh
Q 002398 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (928)
Q Consensus 707 ~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
..|+.|.++||++.++||++-..+..=|+++||-. .+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~q------------------------------------ 79 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQ------------------------------------ 79 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eee------------------------------------
Confidence 67999999999999999999999999999999842 010
Q ss_pred cccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeEEEEcCCccCH
Q 002398 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 863 (928)
Q Consensus 787 ~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~vl~iGDG~ND~ 863 (928)
-..+|....+.|.+..+ +.|+++||-.||.
T Consensus 80 -----------------------------------------------G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 80 -----------------------------------------------GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -----------------------------------------------chHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 12346655555544333 6899999999999
Q ss_pred HHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 864 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 864 ~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
|+|+..+++++..+. ....+..||+|+..
T Consensus 113 pvm~~vGls~a~~dA-h~~v~~~a~~Vt~~ 141 (170)
T COG1778 113 PVMEKVGLSVAVADA-HPLLKQRADYVTSK 141 (170)
T ss_pred HHHHHcCCccccccc-CHHHHHhhHhhhhc
Confidence 999999999999544 34478889998874
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.89 E-value=5.6e-05 Score=75.72 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=37.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
+++++.+.++.|++.|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00053 Score=84.31 Aligned_cols=197 Identities=14% Similarity=0.046 Sum_probs=102.2
Q ss_pred ccceEeeeeecc--ccCCCChHHHHHHHHH-cCCeEEEEcCCChhHHHHHHHHcC--cccCCceEEEEeCCCCccccccc
Q 002398 687 KNLILLGATAVE--DKLQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEK 761 (928)
Q Consensus 687 ~dl~llG~~~i~--D~lr~~~~~~I~~Lk~-aGI~v~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~ 761 (928)
-|.||+....-. ..+-+++.++|++|.+ .|+.|+++||++...........+ ++..++..+...+..-.......
T Consensus 499 ~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~ 578 (726)
T PRK14501 499 YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVA 578 (726)
T ss_pred cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcc
Confidence 455666532111 1356788999999999 699999999999998888765444 44444444332221100000000
Q ss_pred hhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechh----hHHHhHHHHHHHHHHHhhcCCeEE-----EEe
Q 002398 762 SEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKS----LTYALEDDVKDLFLELAIGCASVI-----CCR 832 (928)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~----l~~~l~~~~~~~~~~~~~~~~~~v-----~~r 832 (928)
..-.+.+......- .......+. ......+...-.. +.....+++..++..........+ +..
T Consensus 579 ~~w~~~v~~il~~~----~~~~~gs~i----e~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~ve 650 (726)
T PRK14501 579 TEWKDAVRPILEEF----VDRTPGSFI----EEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVE 650 (726)
T ss_pred hhHHHHHHHHHHHH----HhcCCCcEE----EEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEE
Confidence 00011111111100 000000000 0111333332211 111111233444433322222212 123
Q ss_pred cCc--ccHHHHHHHHhhcC-CCeEEEEcCCccCHHHHHhC---ceeEEEcCcchhhHhHhcceecccccc
Q 002398 833 SSP--KQKALVTRLVKTKT-SSTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 833 ~sp--~qK~~iV~~l~~~~-~~~vl~iGDG~ND~~ml~~A---dvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
+.| -+|+..++.+.+.. ...++++||+.||.+||+.+ +.+|+|++. ..+|++.+.+-.-
T Consensus 651 V~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~-----~s~A~~~l~~~~e 715 (726)
T PRK14501 651 VRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG-----ESRARYRLPSQRE 715 (726)
T ss_pred EEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC-----CCcceEeCCCHHH
Confidence 445 37999999887632 36899999999999999996 578888443 3578999986443
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.6e-05 Score=78.19 Aligned_cols=112 Identities=12% Similarity=0.042 Sum_probs=77.5
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhh
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (928)
+..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+......
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g----------------------- 140 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG----------------------- 140 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-----------------------
Confidence 356789999999999999999999999999999999999999842100000000000
Q ss_pred HHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeE
Q 002398 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STT 853 (928)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~v 853 (928)
..+|+. ..-.+.++.|...++.+.+..+ ..+
T Consensus 141 -----------------------~~~g~~-----------------------~~~~~~g~~K~~~l~~~~~~~~~~~~~~ 174 (202)
T TIGR01490 141 -----------------------IYTGNI-----------------------DGNNCKGEGKVHALAELLAEEQIDLKDS 174 (202)
T ss_pred -----------------------EEeCCc-----------------------cCCCCCChHHHHHHHHHHHHcCCCHHHc
Confidence 011110 0011345678777766543233 478
Q ss_pred EEEcCCccCHHHHHhCceeEEEcC
Q 002398 854 LAIGDGANDVGMLQEADIGVGISG 877 (928)
Q Consensus 854 l~iGDG~ND~~ml~~AdvGIa~~g 877 (928)
+++||+.+|++|++.|+.++.+..
T Consensus 175 ~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 175 YAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred EeeeCCcccHHHHHhCCCcEEeCC
Confidence 999999999999999999998854
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00012 Score=76.09 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
+++||+.++++.|++.|+++.|+||-....+..+.+.+ +.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~ 113 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IP 113 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CC
Confidence 68999999999999999999999999999999998887 53
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.81 E-value=9.3e-05 Score=74.87 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=39.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 113 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD 113 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh
Confidence 4789999999999999999999999999999999998888743
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.77 E-value=7.2e-05 Score=70.87 Aligned_cols=43 Identities=28% Similarity=0.305 Sum_probs=39.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
..++.+++++.+++|++.|++++++||.....+....+.+|+.
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 4488999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0003 Score=74.35 Aligned_cols=49 Identities=18% Similarity=0.351 Sum_probs=40.2
Q ss_pred EEecCcc--cHHHHHHHHhhcCCCeEEEEcC----CccCHHHHHh-CceeEEEcCcch
Q 002398 830 CCRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 880 (928)
Q Consensus 830 ~~r~sp~--qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~-AdvGIa~~g~~~ 880 (928)
+..+.|. .|+..++.|+ ....|++||| |.||.+||+. -=.|+.+++.+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3345554 7999999998 5678999999 8999999997 778899987665
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00042 Score=72.09 Aligned_cols=44 Identities=30% Similarity=0.254 Sum_probs=41.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
+..+-+++++++..|+++|++..++|+++...+..+.+..|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 56788999999999999999999999999999999999999864
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00035 Score=73.02 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=38.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
-++.+++.+.++.|++.|++++++||.....+..+.+.+|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999999999888874
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00044 Score=71.15 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=37.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 68899999999999999999999999998888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00065 Score=70.29 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 57899999999999999999999999999999999888875
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0009 Score=70.77 Aligned_cols=167 Identities=15% Similarity=0.175 Sum_probs=82.6
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCcc-ccccc-hhhHHHHHHHHHHhhHHHhhhhhhhccc
Q 002398 712 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES-KTLEK-SEDKSAAAAALKASVLHQLIRGKELLDS 789 (928)
Q Consensus 712 Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (928)
..+.++.++++||++.+.+..+.++.++..++ .++.-.|..... ..... ..-.+.+..........++-.....+..
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd-~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~ 109 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD-YIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRP 109 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S-EEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC-EEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCccc
Confidence 34778999999999999999999999986542 222111111110 00111 1111112111111110111000111111
Q ss_pred ---CCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeE----EEEecCcc--cHHHHHHHHhhcCC---CeEEEEc
Q 002398 790 ---SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIG 857 (928)
Q Consensus 790 ---~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~----v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iG 857 (928)
........+..++.......+ +++...+......++.+ -+..+-|. .|+..|+.++++.+ ..|+++|
T Consensus 110 q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aG 188 (247)
T PF05116_consen 110 QPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAG 188 (247)
T ss_dssp GGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEE
T ss_pred CCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEe
Confidence 111233455556665544322 23444333222222211 12334443 79999999987643 5789999
Q ss_pred CCccCHHHHHhCceeEEEcCcch
Q 002398 858 DGANDVGMLQEADIGVGISGVEG 880 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~~ 880 (928)
|+.||.+||..++-||.+.+...
T Consensus 189 DSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 189 DSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp SSGGGHHHHCCSSEEEE-TTS-H
T ss_pred CCCCcHHHHcCcCCEEEEcCCCH
Confidence 99999999999999999865443
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00093 Score=71.86 Aligned_cols=42 Identities=12% Similarity=0.136 Sum_probs=37.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.++.+++.++|+.|++.|++++|+||.+...+..+....++-
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH
Confidence 468899999999999999999999999988888887777763
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0066 Score=64.22 Aligned_cols=65 Identities=9% Similarity=0.043 Sum_probs=47.6
Q ss_pred cCcccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhC--------ceeEEEcCcchhhHhHhcceecccccccchh
Q 002398 833 SSPKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 833 ~sp~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~A--------dvGIa~~g~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
-.+.+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.|...+ .+..|++++.+...+..+
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---cCCCceEeCCCHHHHHHH
Confidence 445589988887765433 5799999999999999999 5777774111 456799999876654443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0015 Score=68.00 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=39.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
-++-|++.++|+.|++.|+++.++||.....+..+.+..||..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4678999999999999999999999999999999998888753
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.016 Score=71.61 Aligned_cols=203 Identities=11% Similarity=0.103 Sum_probs=101.5
Q ss_pred ccceEeeeeeccccCCCChHHHHHHH-HHcCCeEEEEcCCChhHHHHHHHH---cCcccCCceEEEEeCCCCccccccch
Q 002398 687 KNLILLGATAVEDKLQNGVPECIDKL-AQAGIKLWVLTGDKMETAINIGFA---CSLLRQGMRQVIISSETPESKTLEKS 762 (928)
Q Consensus 687 ~dl~llG~~~i~D~lr~~~~~~I~~L-k~aGI~v~mlTGD~~~ta~~ia~~---~gi~~~~~~~~~~~~~~~~~~~~~~~ 762 (928)
-|.||+-.....-.+-+++.+++++| ++.|+.|+++||+...+....-.. ++++.+++..+...+...-. ...
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~-~~~-- 679 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWE-TCV-- 679 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceee-ecc--
Confidence 35555533222224556888999997 778999999999999999888744 45666666554433321100 000
Q ss_pred hhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHh----HHHHHHHHHHHhhcCCeEE-----EEec
Q 002398 763 EDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL----EDDVKDLFLELAIGCASVI-----CCRS 833 (928)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l----~~~~~~~~~~~~~~~~~~v-----~~r~ 833 (928)
...+.........+..... ...+.+--......++..-...+.-+ ..++..++..........+ +..+
T Consensus 680 ~~~~~~w~~~v~~i~~~y~---ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV 756 (854)
T PLN02205 680 PVADCSWKQIAEPVMQLYT---ETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEV 756 (854)
T ss_pred hhhhHHHHHHHHHHHHHHh---cCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEE
Confidence 0000000000000000000 00000000122445555444332111 1233333333222111111 1223
Q ss_pred Ccc--cHHHHHHHHhhc---CC---CeEEEEcCCccCHHHHHhCc--------------eeEEEcCcchhhHhHhcceec
Q 002398 834 SPK--QKALVTRLVKTK---TS---STTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDIAI 891 (928)
Q Consensus 834 sp~--qK~~iV~~l~~~---~~---~~vl~iGDG~ND~~ml~~Ad--------------vGIa~~g~~~~~a~~~aD~vi 891 (928)
.|. .|+..++.+.+. .| ..++++||+.||..||+.++ ++|.++... ..|.|-+
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~-----S~A~y~L 831 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKP-----SKAKYYL 831 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCC-----ccCeEec
Confidence 343 699988887531 23 47999999999999999886 555563322 3567777
Q ss_pred ccccccchh
Q 002398 892 AQFRFLERL 900 (928)
Q Consensus 892 ~~f~~l~~l 900 (928)
.+-..+..+
T Consensus 832 ~d~~eV~~l 840 (854)
T PLN02205 832 DDTAEIVRL 840 (854)
T ss_pred CCHHHHHHH
Confidence 665444444
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.003 Score=65.02 Aligned_cols=109 Identities=15% Similarity=0.111 Sum_probs=74.8
Q ss_pred cCCCChHHHHH-HHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 700 KLQNGVPECID-KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 700 ~lr~~~~~~I~-~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
.+.|++.++|+ .+++.|++++|+|+-....+..+|+..++.... .++..+-+.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le~------------------------- 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIER------------------------- 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeEE-------------------------
Confidence 57999999996 788899999999999999999999987664321 222111110
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcC
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGD 858 (928)
.+|. -+..-.+..++|..-++..-........+-||
T Consensus 148 ----------------------~~gg----------------------~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 148 ----------------------GNGG----------------------WVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ----------------------eCCc----------------------eEcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 0100 00122355677876565332212346679999
Q ss_pred CccCHHHHHhCceeEEEcCc
Q 002398 859 GANDVGMLQEADIGVGISGV 878 (928)
Q Consensus 859 G~ND~~ml~~AdvGIa~~g~ 878 (928)
+.||.|||+.||..+++...
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred CcccHHHHHhCCCcEEECcc
Confidence 99999999999999999543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0017 Score=67.34 Aligned_cols=42 Identities=21% Similarity=0.059 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.+++.++++.|++.|+++.++||.....+..+.+..|+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~ 123 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE 123 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 378999999999999999999999999999998888888753
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0022 Score=67.22 Aligned_cols=41 Identities=22% Similarity=0.101 Sum_probs=36.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.|++.++++.|++.|+++.++|+.+...+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999988887777777764
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0036 Score=64.61 Aligned_cols=109 Identities=15% Similarity=0.116 Sum_probs=75.7
Q ss_pred cCCCChHHHH-HHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 700 KLQNGVPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 700 ~lr~~~~~~I-~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
.+.|++.++| +.|++.|++++++|+-....+..+++.+|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999998632 1122221110
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHH-HhhcCCCeEEEEc
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRL-VKTKTSSTTLAIG 857 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~-l~~~~~~~vl~iG 857 (928)
...+|. +....+..+.|..-++. +.. ......+-|
T Consensus 148 --------------------~~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~-~~~~~~aY~ 183 (211)
T PRK11590 148 --------------------RRYGGW-----------------------VLTLRCLGHEKVAQLERKIGT-PLRLYSGYS 183 (211)
T ss_pred --------------------EEEccE-----------------------ECCccCCChHHHHHHHHHhCC-CcceEEEec
Confidence 011111 11223556778766654 332 345668999
Q ss_pred CCccCHHHHHhCceeEEEcCcc
Q 002398 858 DGANDVGMLQEADIGVGISGVE 879 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~ 879 (928)
|+.||.|||+.|+-++++....
T Consensus 184 Ds~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 184 DSKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CCcccHHHHHhCCCCEEECccH
Confidence 9999999999999999995443
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0047 Score=66.29 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=38.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++-|++.++++.|++.|+++.|+|+.....+..+.+.+|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999998884
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0029 Score=66.96 Aligned_cols=47 Identities=15% Similarity=0.249 Sum_probs=42.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCce
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR 745 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~ 745 (928)
-+++||+.+.++.|++.|+++.++||-....+..+.+++|+...+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~ 166 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK 166 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce
Confidence 45799999999999999999999999999999999999998755543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0029 Score=72.97 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=38.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
|+++++.+.|+++++.|++++++|+-+...+..+++.+|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999998
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0037 Score=66.62 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=38.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.+++.++++.|++.|+++.|+|+.+...+..+-..+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 568999999999999999999999999999999988888753
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.00081 Score=54.69 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=39.3
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcc
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFT 96 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~ 96 (928)
.+.|+.+||.|.++..+.+.++ +.+++||.+|+.++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3567889999999998744443 899999999999999999999986
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.038 Score=61.43 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=47.1
Q ss_pred EecCc---ccHHHHHHHHhhcCC---C---eEEEEcCCccCHHHHHh-----CceeEEEcCcchhhHhHhcceecccccc
Q 002398 831 CRSSP---KQKALVTRLVKTKTS---S---TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 831 ~r~sp---~qK~~iV~~l~~~~~---~---~vl~iGDG~ND~~ml~~-----AdvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
..+.| -+|+..|+.+.+..+ . .+++|||+.||..||+. +++||+|++... ...|+|.|.+-.-
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~e 368 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSE 368 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHH
Confidence 34555 389999988876543 1 25899999999999996 689998864222 2368888887544
Q ss_pred cchh
Q 002398 897 LERL 900 (928)
Q Consensus 897 l~~l 900 (928)
+..+
T Consensus 369 V~~~ 372 (384)
T PLN02580 369 VMEF 372 (384)
T ss_pred HHHH
Confidence 4444
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0048 Score=61.05 Aligned_cols=162 Identities=17% Similarity=0.191 Sum_probs=92.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++-||+.++++.|.+. ...+++|---.+-+..+|.-+|+...+.+...++-.+. ...+.+..+.+..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~---~~PeeeR~E~L~~--------- 149 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSI---AVPEEEREELLSI--------- 149 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccc---cCChHHHHHHHHh---------
Confidence 5679999999999865 44455555556778888888888544332221111110 0011111011100
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHH----HHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC--CeE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVK----DLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS--STT 853 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~----~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~--~~v 853 (928)
+ ...-.++|+.|-.-+++-+. .....++...+++ --..|+.+++.+.+..+ ...
T Consensus 150 -------~--------~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~V-----Ggg~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 -------I--------DVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAV-----GGGEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred -------c--------CccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhc-----cCcchhHHHHHHHhhcCCCcce
Confidence 0 00114566655444443111 1112222222221 12468888887776433 347
Q ss_pred EEEcCCccCHHHHHhC----ceeEEEcCcchhhHhHhcceecccccc
Q 002398 854 LAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 854 l~iGDG~ND~~ml~~A----dvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
+.+||+..|+.||+++ ++.|+..|++- |...||+.+..-..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~ 254 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTA 254 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccch
Confidence 8999999999999998 47778888887 88889998876433
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.00056 Score=56.57 Aligned_cols=44 Identities=27% Similarity=0.322 Sum_probs=37.4
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHh
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILS 94 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~ 94 (928)
.++|+++||+|.++..+...++ +.|+++|..|++++++++++++
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 4667889999999777655554 9999999999999999999885
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.068 Score=58.89 Aligned_cols=199 Identities=10% Similarity=0.033 Sum_probs=102.7
Q ss_pred ccceEeeeeeccc--cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCc-----ccc-
Q 002398 687 KNLILLGATAVED--KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE-----SKT- 758 (928)
Q Consensus 687 ~dl~llG~~~i~D--~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~-----~~~- 758 (928)
-|.||+-++.-.| .+-+++.++|++|. .|+.++++|||....+.... ++ .+..++..+|.... ...
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~ 191 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRH 191 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceec
Confidence 4677776655334 37789999999999 78999999999999998873 22 12223333332100 000
Q ss_pred --------ccc-hhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCC---
Q 002398 759 --------LEK-SEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA--- 826 (928)
Q Consensus 759 --------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~--- 826 (928)
... ......+.. ....+...........-....+++.+.-.........++..++..+.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~i~~-----v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~ 266 (366)
T PLN03017 192 KRVKQSLLYQPANDYLPMIDE-----VYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLK 266 (366)
T ss_pred cccccccccccchhhHHHHHH-----HHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcE
Confidence 000 000011111 111111101111111112344556655554433222233333333222211
Q ss_pred ---eEEEEecCc---ccHHHHHHHHhhcCC------CeEEEEcCCccCHHHHHhC-----ceeEEEcCcchhhHhHhcce
Q 002398 827 ---SVICCRSSP---KQKALVTRLVKTKTS------STTLAIGDGANDVGMLQEA-----DIGVGISGVEGMQAVMSSDI 889 (928)
Q Consensus 827 ---~~v~~r~sp---~qK~~iV~~l~~~~~------~~vl~iGDG~ND~~ml~~A-----dvGIa~~g~~~~~a~~~aD~ 889 (928)
.--...+.| -+|+..++.+.+..+ ..++++||-..|-.|++.. ++||.++.... ...|+|
T Consensus 267 v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y 343 (366)
T PLN03017 267 LTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASY 343 (366)
T ss_pred EeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceE
Confidence 111223444 489999988875432 3689999999999999866 46666642121 246889
Q ss_pred ecccccccch
Q 002398 890 AIAQFRFLER 899 (928)
Q Consensus 890 vi~~f~~l~~ 899 (928)
.+.+-.-+..
T Consensus 344 ~L~dp~eV~~ 353 (366)
T PLN03017 344 SLQDPSEVMD 353 (366)
T ss_pred eCCCHHHHHH
Confidence 8877544333
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0085 Score=62.24 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=33.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
++.||+.++|+.|++.|+++.++|+.+...+...-...++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999887766555555555
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.01 Score=59.14 Aligned_cols=41 Identities=20% Similarity=0.215 Sum_probs=32.7
Q ss_pred ccceEeeeeeccc----cCCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002398 687 KNLILLGATAVED----KLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (928)
Q Consensus 687 ~dl~llG~~~i~D----~lr~~~~~~I~~Lk~aGI~v~mlTGD~~ 727 (928)
.|.++.|-..+.+ ++.|+++++++.|++.|++++++|+.+.
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 5666666655443 3689999999999999999999998763
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0086 Score=62.22 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=38.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.++.+|+.+.++.|++.|+++.++||-....+..+.+.+|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999998888875
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0072 Score=62.97 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC----ChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGD----KMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD----~~~ta~~ia~~~gi~ 740 (928)
.+.+++++.++.|++.|+++.++|++ ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34455999999999999999999999 667899999889985
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=62.61 Aligned_cols=42 Identities=29% Similarity=0.195 Sum_probs=37.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++-||+.++++.|++.|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999999988888888753
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.014 Score=64.95 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=38.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
.+.+|+.++++.|++.|+++.++|+.....+..+-+..||..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 467999999999999999999999999999999998888853
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.013 Score=59.73 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=39.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+++.++++++++.|++.|+++.++||.+...+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557788899999999999999999999999999999999885
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.021 Score=55.76 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 731 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~ 731 (928)
+|.+.+++.+++++++++|++++++||++...+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999998875
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.015 Score=67.60 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=38.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.||+.++++.|++.|+++.++|+.....+..+...+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 688999999999999999999999999999999998888753
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.014 Score=60.85 Aligned_cols=42 Identities=12% Similarity=0.145 Sum_probs=35.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCC----hhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDK----METAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~----~~ta~~ia~~~gi~ 740 (928)
-.+.+++++.|+.|++.|+++.++||+. ..++..+.+..|+.
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 3467889999999999999999999985 45888888888883
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.021 Score=61.86 Aligned_cols=38 Identities=26% Similarity=0.265 Sum_probs=32.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
++.||+.++++.|++.|+++.++|+-+...+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998887776665444
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.026 Score=53.35 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=35.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCC--------hhHHHHHHHHcCc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDK--------METAINIGFACSL 739 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~--------~~ta~~ia~~~gi 739 (928)
-++.+++.++++.|+++|++++++|+.. ...+..+...+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999998 6667777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.021 Score=61.39 Aligned_cols=41 Identities=27% Similarity=0.141 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++-||+.++|+.|++.|+++.++||.....+..+-+..++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999998887777766654
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.031 Score=59.31 Aligned_cols=42 Identities=21% Similarity=0.085 Sum_probs=38.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.|++.++++.|++.|+++.++|+-....+...-+.+||..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 578999999999999999999999999999999988888753
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.027 Score=57.47 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|++++++|+-+...+..+.+.+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999988888888888874
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.03 Score=58.11 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|++++++|+-+...+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888888777777774
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.19 Score=55.23 Aligned_cols=228 Identities=13% Similarity=0.091 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHhhhcccCHHHHHHHHHHHH---------hccceEeeeeecccc--CCCChHHHHHHHHHcCCeEEEE
Q 002398 654 KEYKQFNEEFTEAKNSVSADREELAEEIAEKI---------EKNLILLGATAVEDK--LQNGVPECIDKLAQAGIKLWVL 722 (928)
Q Consensus 654 ~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~i---------e~dl~llG~~~i~D~--lr~~~~~~I~~Lk~aGI~v~ml 722 (928)
++|..|..++..|-..+ +++.... --|.||+-++---|. +-+++.++|+.|. .+..++++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57889998887666443 2222222 124444433323333 5678889999999 56799999
Q ss_pred cCCChhHHHHHHHHcCc--ccCCceEEEEeCCCCc-ccc-------cc-chhhHHHHHHHHHHhhHHHhhhhhhhcccCC
Q 002398 723 TGDKMETAINIGFACSL--LRQGMRQVIISSETPE-SKT-------LE-KSEDKSAAAAALKASVLHQLIRGKELLDSSN 791 (928)
Q Consensus 723 TGD~~~ta~~ia~~~gi--~~~~~~~~~~~~~~~~-~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (928)
|||..........-.++ ....+.. +...... ... .. ...-...+.. ....+...........
T Consensus 142 SGR~~~~l~~~~~~~~l~laGsHG~e--~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~-----v~~~l~~~~~~~pG~~ 214 (354)
T PLN02151 142 SGRCREKVSSFVKLTELYYAGSHGMD--IKGPEQGSKYKKENQSLLCQPATEFLPVINE-----VYKKLVEKTKSIPGAK 214 (354)
T ss_pred ECCCHHHHHHHcCCccceEEEeCCce--eecCCCCccccccccccccccchhhHHHHHH-----HHHHHHHHHhcCCCCE
Confidence 99999998887643232 1111111 1111000 000 00 0000111110 0011110001111111
Q ss_pred CCCCCeEEEEechhhHHHhHHHHHHHHHHHhhc--------CCeEEEEecC-cccHHHHHHHHhhcCC------CeEEEE
Q 002398 792 ESLGPLALIIDGKSLTYALEDDVKDLFLELAIG--------CASVICCRSS-PKQKALVTRLVKTKTS------STTLAI 856 (928)
Q Consensus 792 ~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~--------~~~~v~~r~s-p~qK~~iV~~l~~~~~------~~vl~i 856 (928)
-....+++.+.-.........++..++..+... -+.++=.|-. .-+|+..|+.+.+..+ ..++++
T Consensus 215 VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyi 294 (354)
T PLN02151 215 VENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYI 294 (354)
T ss_pred EEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEE
Confidence 122345555554433221111222333322222 1233333322 3489999988875432 248999
Q ss_pred cCCccCHHHHHhC-----ceeEEEcCcchhhHhHhcceecccccccchh
Q 002398 857 GDGANDVGMLQEA-----DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 857 GDG~ND~~ml~~A-----dvGIa~~g~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
||-..|-.|++.. ++||.++.... ...|+|.|.+-.-+..+
T Consensus 295 GDD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 295 GDDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVMEF 340 (354)
T ss_pred cCCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHHH
Confidence 9999999999864 56666642111 22689988875544443
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.038 Score=53.24 Aligned_cols=38 Identities=16% Similarity=0.248 Sum_probs=32.8
Q ss_pred ccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEE
Q 002398 836 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 874 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa 874 (928)
.+|...|+.+++ ..+.+.+||||.-|+++-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 479999999998 78889999999999998887776554
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.18 Score=50.15 Aligned_cols=47 Identities=6% Similarity=0.128 Sum_probs=37.7
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc-----cCCceEEEE
Q 002398 703 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL-----RQGMRQVII 749 (928)
Q Consensus 703 ~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~-----~~~~~~~~~ 749 (928)
+.+.+.+.+|+++|+.|+.+|.-........-+++|+- .+++..+.+
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~ 77 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYL 77 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEe
Confidence 35778999999999999999999999888888888863 444444444
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.044 Score=57.07 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+|+.++++.|++.|+++.++|+-+.+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888887777777764
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.062 Score=53.17 Aligned_cols=53 Identities=23% Similarity=0.185 Sum_probs=43.5
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCC-ChhHHHHHHHHcCcc
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACSLL 740 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD-~~~ta~~ia~~~gi~ 740 (928)
+.......+-+-++.+++.++++.|+++|+++.++|+- ....+..+...+++.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 34455555556678999999999999999999999976 888888888888874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.031 Score=61.19 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=40.8
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
..+++.+++.++|+.|++.|++++++||++...+..+.+.+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999888774
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.044 Score=61.92 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHH-HcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF-ACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~-~~gi 739 (928)
++.+|+.++++.|++.|+++.|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998887776554 4565
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.055 Score=54.29 Aligned_cols=51 Identities=14% Similarity=0.096 Sum_probs=34.2
Q ss_pred CCeEEEEcCCccCHHHHHhCceeE-EEc-Ccch-hhHhHhc--ceecccccccchh
Q 002398 850 SSTTLAIGDGANDVGMLQEADIGV-GIS-GVEG-MQAVMSS--DIAIAQFRFLERL 900 (928)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~AdvGI-a~~-g~~~-~~a~~~a--D~vi~~f~~l~~l 900 (928)
...++||||+.+|+.+-+.|++.+ ++. |... ......+ |+++.++..+..+
T Consensus 120 ~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 120 LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 468999999999999999999864 332 2211 1112335 8888777666554
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.034 Score=54.87 Aligned_cols=45 Identities=20% Similarity=0.186 Sum_probs=40.7
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
-..++.+++.+.++.|++.|++++++|+.+...+....+.+|+..
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~ 118 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD 118 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc
Confidence 346789999999999999999999999999999999999998863
|
... |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.051 Score=54.60 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=33.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
-++.+|+.++|+.|++.|+++.++|+. ..+..+.+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 468999999999999999999999987 5566666777764
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.087 Score=54.84 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=34.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|+ +|+++.++|......+...-..+|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 46899999999999 68999999998888777777777764
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.051 Score=54.60 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=31.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.++.|++.++|+.|+++|+++.++|+... +..+.+.+|+.
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 36789999999999999999999997532 34555666653
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.079 Score=51.14 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=25.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDK 726 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~ 726 (928)
++.+++.++++.|++.|+++.++|..+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.099 Score=54.29 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=27.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETA 730 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta 730 (928)
-++.+|+.++|+.|++.|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998776543
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.097 Score=52.32 Aligned_cols=40 Identities=25% Similarity=0.215 Sum_probs=33.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 578999999999999999999999988777 5554446764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.096 Score=51.94 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC-hhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~-~~ta~~ia~~~gi 739 (928)
.+-+++.++++.|++.|++++++|+-+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5666666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.11 Score=54.09 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++. ++++++|+-....+..+.+++|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.18 Score=50.38 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=32.8
Q ss_pred CCeEEEEcCCccCHHHHHhCceeE--EE-cCcch-hhHhHhcceeccccccc
Q 002398 850 SSTTLAIGDGANDVGMLQEADIGV--GI-SGVEG-MQAVMSSDIAIAQFRFL 897 (928)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~AdvGI--a~-~g~~~-~~a~~~aD~vi~~f~~l 897 (928)
...++||||...|+.+=+.|++.. .+ .|... ......+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 367999999999999999999853 44 33221 11123488888766544
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.27 Score=52.16 Aligned_cols=43 Identities=9% Similarity=0.131 Sum_probs=33.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHH---HHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI---NIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~---~ia~~~gi~ 740 (928)
..++-+++.+.++.|++.|+++.++|++...... ...+..|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 4557899999999999999999999999854433 344455663
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.064 Score=51.83 Aligned_cols=42 Identities=19% Similarity=-0.002 Sum_probs=37.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.-+++|++.+.++.|+ .++++.|+|.-+...+..+.+.+++.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3467999999999999 57999999999999999998888763
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.19 Score=48.71 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=33.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
+.+..+++.++++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3445689999999999999999999999988888776654
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.15 Score=47.83 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=33.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC-ChhHHHHHHHHcC
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACS 738 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD-~~~ta~~ia~~~g 738 (928)
++.+++.++++.|++.|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6766666655544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.1 Score=59.57 Aligned_cols=238 Identities=15% Similarity=0.159 Sum_probs=127.4
Q ss_pred HhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCC--Cc-cccc--
Q 002398 685 IEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET--PE-SKTL-- 759 (928)
Q Consensus 685 ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~--~~-~~~~-- 759 (928)
.-..-.|.|++...-+.+.+....|+.|-++.|+.+-.+-.+.....-.|.++||-..=.--+.+..+. .. +...
T Consensus 811 a~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~ 890 (1354)
T KOG4383|consen 811 AFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAH 890 (1354)
T ss_pred HhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCC
Confidence 346778999999999999999999999999999999999999999999999999854222222222111 00 0000
Q ss_pred -----cchhhHHHHHHHHHH---hhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhH--HHHHHHHHHHhhcC-CeE
Q 002398 760 -----EKSEDKSAAAAALKA---SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE--DDVKDLFLELAIGC-ASV 828 (928)
Q Consensus 760 -----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~--~~~~~~~~~~~~~~-~~~ 828 (928)
.+..-.+.+++...+ ......+.+.....+-+.......-.........+.. ...+.|+.++-... =+-
T Consensus 891 ~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~ 970 (1354)
T KOG4383|consen 891 EQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVG 970 (1354)
T ss_pred hhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeee
Confidence 001111111111111 0001111111111100000000000000000000000 01112221111000 012
Q ss_pred EEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHH--HHHhCceeEEEcCcchh-------------hHhHhcc----e
Q 002398 829 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG--MLQEADIGVGISGVEGM-------------QAVMSSD----I 889 (928)
Q Consensus 829 v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~--ml~~AdvGIa~~g~~~~-------------~a~~~aD----~ 889 (928)
.|..++|+.--++++.+|+ .|++|+..|..+|-.. .+-+||++|++..-+.. ....++| .
T Consensus 971 LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglspl 1049 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPL 1049 (1354)
T ss_pred eccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCce
Confidence 6889999999999999999 8999999999988543 45789999988542111 0112233 1
Q ss_pred ecc--------cccc-------cchhhhcchhhhHHHhhhhheeeeeccc
Q 002398 890 AIA--------QFRF-------LERLLLVHGHWCYRRISSMVCFTLKMLI 924 (928)
Q Consensus 890 vi~--------~f~~-------l~~lll~~gr~~~~~i~~~i~~~~~~n~ 924 (928)
-|. +|++ +.+| +...|....-+++.++|.++..+
T Consensus 1050 QiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL 1098 (1354)
T KOG4383|consen 1050 QISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQL 1098 (1354)
T ss_pred eecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHH
Confidence 111 2333 4444 77788888888888887776543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.25 Score=50.40 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=31.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
++-+++.++++.|++.|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999986543 4555566665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.29 Score=47.97 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD 725 (928)
++-+++.++|+.|++.|+++.++|--
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.24 Score=52.03 Aligned_cols=199 Identities=12% Similarity=0.110 Sum_probs=77.2
Q ss_pred cceEeeeeeccc--cCCCChHHHHHHHHHc-CCeEEEEcCCChhHHHHHHH--HcCcccCCceEEEEeCCCCccccccch
Q 002398 688 NLILLGATAVED--KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKS 762 (928)
Q Consensus 688 dl~llG~~~i~D--~lr~~~~~~I~~Lk~a-GI~v~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~ 762 (928)
|.||..+..-.+ .+.+++.+++++|.+. +..|+|+||++......... .+++..+++..+...+...... ....
T Consensus 5 DGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~-~~~~ 83 (235)
T PF02358_consen 5 DGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTN-LPAD 83 (235)
T ss_dssp TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE--TTGG
T ss_pred CCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccc-cccc
Confidence 455555444333 4567899999999876 44799999999988555532 2333444443333333321110 0011
Q ss_pred hhHHHHHHHHHHhhHHHhhh-hhhhcccCCCCCCCeEEEEechhhHHH----hHHHHHHHHHHHh--------hcCCeEE
Q 002398 763 EDKSAAAAALKASVLHQLIR-GKELLDSSNESLGPLALIIDGKSLTYA----LEDDVKDLFLELA--------IGCASVI 829 (928)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lvi~g~~l~~~----l~~~~~~~~~~~~--------~~~~~~v 829 (928)
......... .......... +...+ ....+++.+.-...... ...++...+..+. ..-+.+|
T Consensus 84 ~~~~~~~~~-~~~l~~~~~~~pG~~i-----E~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~v 157 (235)
T PF02358_consen 84 EDLEWKDEV-REILEYFAERTPGSFI-----EDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVV 157 (235)
T ss_dssp GGHHHHHHH-HHHHTTHHHHSTT-EE-----EEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEE
T ss_pred cchHHHHHH-HHHHHHHHhhccCcEE-----EECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEE
Confidence 111111111 1111111100 00001 11223333333332211 1112222222211 2223445
Q ss_pred EEecCcccHHHHHHHHhhcCC------CeEEEEcCCccCHHHHHhC------ceeEEEcCcchhhHhHhcceeccc
Q 002398 830 CCRSSPKQKALVTRLVKTKTS------STTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 830 ~~r~sp~qK~~iV~~l~~~~~------~~vl~iGDG~ND~~ml~~A------dvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
=.|..-..|+.+|+.+.+..+ ..++++||...|-.|++.. +++|-+...+......+|+|-+.+
T Consensus 158 Evrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 158 EVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 555555569999987766443 3799999999999999884 556666444322234566665543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.48 Score=52.47 Aligned_cols=26 Identities=35% Similarity=0.415 Sum_probs=24.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcC
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTG 724 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTG 724 (928)
-++.|++.++++.|+++|+++.|+|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 36789999999999999999999998
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.94 Score=43.53 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=40.7
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
|-|++..- ..+.-|++++=+..++++|+++.++|--+..-+..++..+|+.
T Consensus 36 DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 36 DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 44555433 2345678888899999999999999999999999999988884
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.58 Score=46.13 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=23.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKM 727 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~ 727 (928)
+-+++.++|+.|+++|+++.++|.-+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999996543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.8 Score=47.28 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=28.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~t 729 (928)
-+.-+++.++++.|++.|++|+++|||+...
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 4677999999999999999999999999755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.52 Score=51.98 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=33.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~ 736 (928)
++-+++.++|+.|++.|+++.++|.-+...|..+-+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999999988888766
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=91.06 E-value=0.97 Score=46.74 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=33.0
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~ 736 (928)
++-++.+++.++++.|+++|+++.++|..+......+-..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 3457899999999999999999999999887666555443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.73 E-value=0.33 Score=50.36 Aligned_cols=39 Identities=8% Similarity=0.093 Sum_probs=31.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
-++.++++++|+.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35668999999998 4999999999888777776666664
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.62 E-value=0.47 Score=48.80 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=25.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKME 728 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ 728 (928)
++.+++.++++.|++.|++++++|.....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=90.13 E-value=1.2 Score=57.02 Aligned_cols=41 Identities=20% Similarity=0.024 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+-+|+.+.++.|+++|++++|+|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999999888888888874
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.76 E-value=1.8 Score=43.52 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=34.3
Q ss_pred cCCCChHHHHHHHHHcCC-eEEEEcCCChhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI-~v~mlTGD~~~ta~~ia~~~gi 739 (928)
|+-|+..++|+.+++.|. .++|+|--+..-...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 567999999999999997 9999998888777777777776
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=89.68 E-value=0.95 Score=47.02 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=36.7
Q ss_pred cCCCChHHHHHHH--HHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKL--AQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~L--k~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
|+.++.+++++.+ ++.|+.+.|+|--+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 5789999999999 55899999999999988888888888753
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=89.59 E-value=1.5 Score=44.41 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=26.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
++.||+.+++++|++.+ +.+++|.-+.......-+.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 46899999999999975 5677776554444334444444
|
2 hypothetical protein; Provisional |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.90 E-value=0.89 Score=52.32 Aligned_cols=78 Identities=14% Similarity=0.096 Sum_probs=58.3
Q ss_pred CcccchhhhhHhhhhhhHHHHHHHHHHhhhHH-H--------h----cce---------------------EEEEeCCCe
Q 002398 103 AVSNVLPLVVVIGATMGKEVLEDWRRKKQDIE-V--------N----NRK---------------------VKVHCGEGA 148 (928)
Q Consensus 103 ~~~~~~~l~~vl~~~~i~~~~~d~~r~k~~~~-~--------n----~~~---------------------~~v~~r~g~ 148 (928)
.+..+..++.+++++.+.+.++|+-++++.++ + . .++ -+.+ |||+
T Consensus 87 gl~nAsal~LLLLlnilL~grQdRikrr~~eqklRg~~DaI~da~kdgreiq~~nam~~dL~~pfa~s~s~h~af-RDGh 165 (1354)
T KOG4383|consen 87 GLSNASALALLLLLNILLEGRQDRIKRRAFEQKLRGAFDAILDAEKDGREIQKFNAMPKDLEAPFADSASCHSAF-RDGH 165 (1354)
T ss_pred eechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccccCccCcHHHHHHHh-ccCe
Confidence 35566777888888888899988877665221 1 0 001 1234 8999
Q ss_pred EEEEecccCccccEEEeccCCcCCccEEEEeec
Q 002398 149 FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSS 181 (928)
Q Consensus 149 ~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s 181 (928)
..+++..-|+.||||-+++|+..||.+.=+.+.
T Consensus 166 lm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 166 LMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred eeecceeEEEeccEEEecCCccccccccccCCC
Confidence 999999999999999999999999998655544
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=88.42 E-value=1.8 Score=45.61 Aligned_cols=48 Identities=8% Similarity=0.109 Sum_probs=37.6
Q ss_pred eeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHH--HHHHHcCcc
Q 002398 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI--NIGFACSLL 740 (928)
Q Consensus 693 G~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~--~ia~~~gi~ 740 (928)
|.+.-...+-|++.++|++|+++|+++.++|.-....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 556666788999999999999999999999996554433 455667764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.76 E-value=1.7 Score=47.76 Aligned_cols=47 Identities=34% Similarity=0.456 Sum_probs=39.8
Q ss_pred eeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHH---HHcCc
Q 002398 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSL 739 (928)
Q Consensus 693 G~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia---~~~gi 739 (928)
|++.-.+.+=+++.++|+.|++.|++++++|+++..+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666778899999999999999999999999988777776 45565
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.68 E-value=2.2 Score=43.34 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=27.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETA 730 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta 730 (928)
++.+++.++++.|++.|+++.++|.-+....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 4689999999999999999999999765543
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=85.66 E-value=3.5 Score=39.79 Aligned_cols=36 Identities=28% Similarity=0.332 Sum_probs=31.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINI 733 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~i 733 (928)
+|..++++.+...++++.|++++-||+|+.-.|..+
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 379999999999999999999999999997555444
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=85.64 E-value=0.92 Score=40.52 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=37.1
Q ss_pred eeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHH---HHcCcc
Q 002398 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSLL 740 (928)
Q Consensus 693 G~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia---~~~gi~ 740 (928)
|++...+++=|++.++|+.|+++|++++++|-.+..+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 667778889999999999999999999999998876655555 455664
|
... |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=84.67 E-value=2.8 Score=41.87 Aligned_cols=38 Identities=11% Similarity=-0.020 Sum_probs=32.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.+++++|+ .+++++|.-+...+..+.+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999998 479999999988888888888874
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=84.39 E-value=4.1 Score=39.97 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=36.7
Q ss_pred ccccCCCChHHHHHHHHHcCC--eEEEEcCC-------ChhHHHHHHHHcCc
Q 002398 697 VEDKLQNGVPECIDKLAQAGI--KLWVLTGD-------KMETAINIGFACSL 739 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI--~v~mlTGD-------~~~ta~~ia~~~gi 739 (928)
=++++-++..+.+++|++.+. +|+++|-- ....|..+++.+|+
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 467889999999999999987 49999875 37888889888886
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=82.32 E-value=3.3 Score=43.11 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=26.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKME 728 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ 728 (928)
++.=|++.+.++.+++.|++|+.+|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 456688999999999999999999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=80.94 E-value=3.2 Score=43.96 Aligned_cols=50 Identities=10% Similarity=0.087 Sum_probs=41.3
Q ss_pred eeeeccccCCCChHHHHHHHHHcCCeEEEEcC---CChhHHHHHHHHcCcccC
Q 002398 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLLRQ 742 (928)
Q Consensus 693 G~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 742 (928)
|++.-.+.+=+++.++|++|++.|++++++|| ++.+......+++|+-..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 45555566678999999999999999999996 778888888888887543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=80.56 E-value=2.6 Score=44.88 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=37.5
Q ss_pred eeeecccc----CCCChHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCcc
Q 002398 693 GATAVEDK----LQNGVPECIDKLAQAGIKLWVLTGDKMET---AINIGFACSLL 740 (928)
Q Consensus 693 G~~~i~D~----lr~~~~~~I~~Lk~aGI~v~mlTGD~~~t---a~~ia~~~gi~ 740 (928)
|++.-.+. +=+++.++|++|++.|++++++||++..+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 78899999999999999999999988776 44445566763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=80.49 E-value=2.4 Score=45.21 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=38.1
Q ss_pred CC-CChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 701 LQ-NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 701 lr-~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
+| |++.+++++|+++|+++.++|+.....+...-+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999964
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.31 E-value=15 Score=36.51 Aligned_cols=47 Identities=19% Similarity=0.401 Sum_probs=34.0
Q ss_pred CeEEEEecCccc--------HHHHHHHHhhcC--CCeEEEEcCCccCHHHHHhCcee
Q 002398 826 ASVICCRSSPKQ--------KALVTRLVKTKT--SSTTLAIGDGANDVGMLQEADIG 872 (928)
Q Consensus 826 ~~~v~~r~sp~q--------K~~iV~~l~~~~--~~~vl~iGDG~ND~~ml~~AdvG 872 (928)
..+.+|.--|++ .+.+.+.++++. -....+|||-..|..+-..|+++
T Consensus 88 d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 88 DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 345666666653 456667777631 26789999999999998888887
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 928 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-07 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 8e-06 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-05 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 928 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-31 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-29 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 4e-28 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-19 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-06 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-16 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 8e-05 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 3e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 2e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 6e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 7e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 7e-05 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 4e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 4e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 6e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 6e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 2e-31
Identities = 93/480 (19%), Positives = 159/480 (33%), Gaps = 122/480 (25%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG I SDKTGTLT N M + V + ++ +
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM---------S--------VCKMFI---IDKVDGDFCSL 380
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
E + + E E + N + D + + + A+C+ + + +E G E
Sbjct: 381 NEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGE 440
Query: 535 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 594
E A ++ + ++S E + + + LEFS RK MSV
Sbjct: 441 -ATETALTTLVEKMN--VFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSV 497
Query: 595 IVRSEEGTL-----LLLSKGA-DSVM----FERLAENGREFEEQTKEHI----NEYADA- 639
+ + + KGA + V+ + R+ KE I E+
Sbjct: 498 YCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGR 557
Query: 640 -GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 698
LR L LA R+ K + ++ + + E +L +G +
Sbjct: 558 DTLRCLALATRDTPPKREEMVLDDSSR----------------FMEYETDLTFVGVVGML 601
Query: 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758
D + V I AGI++ ++TGD TAI I R++ I E
Sbjct: 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRIGIFGEN----- 646
Query: 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818
E+ D++ G+E D + +
Sbjct: 647 -EEVADRA--------------YTGREFDDLPLA----------------EQREACRR-- 673
Query: 819 LELAIGCASVICCRSSPKQKALVTRLVKT-----KTSSTTLAIGDGANDVGMLQEADIGV 873
A R P K +++V+ + ++ T GDG ND L++A+IG+
Sbjct: 674 -------ACCF-ARVEPSHK---SKIVEYLQSYDEITAMT---GDGVNDAPALKKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 1e-29
Identities = 91/492 (18%), Positives = 145/492 (29%), Gaps = 147/492 (29%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG I SDKTGTLT N M +
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIH---------------------SADTT 413
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
++ + ++ + R+L +C+ A +
Sbjct: 414 EDQSGQT----------------FDQSSETWRALCRVLTLCNRA--AFKSGQDAVPVPKR 455
Query: 535 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590
E A + + + + + + F+S+ K
Sbjct: 456 IVIGDASETALLKFSELTL----------GNAMGY--------RERFPKVCEIPFNSTNK 497
Query: 591 RMSVIVRSEE---GTLLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 638
I E+ +L+ KGA + ER + G +EQ +E
Sbjct: 498 FQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGG 557
Query: 639 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 698
G R L L EK+Y EA N L G ++
Sbjct: 558 LGERVLGFCQLYLSEKDYPPGYAFDVEAMNFP---------------TSGLSFAGLVSMI 602
Query: 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758
D + VP+ + K AGI++ ++TGD TA I V I SE E+
Sbjct: 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGIISEGSETVE 652
Query: 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818
+ + + +I G +L D L + ++
Sbjct: 653 DIAARLRVPVDQVNRKDARACVINGMQLKDMDPS----------------ELVEALRTH- 695
Query: 819 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 867
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 696 -------PEMVFARTSPQQK---LVIVESCQRLGAIVAVT---------GDGVNDSPALK 736
Query: 868 EADIGV--GISG 877
+ADIGV GI+G
Sbjct: 737 KADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 4e-28
Identities = 102/492 (20%), Positives = 155/492 (31%), Gaps = 147/492 (29%)
Query: 415 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 474
E LG TI SDKTGTLT N M T V + +
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM---------T-----VAHM---------------WFDN 400
Query: 475 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 534
Q +A + + R+ A+C+ A +
Sbjct: 401 QIHEADTTENQSGAAF--------DKTSATWSALSRIAALCNRA--VFQAGQDNVPILKR 450
Query: 535 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590
S E+A + SV + + + F+S+ K
Sbjct: 451 SVAGDASESALLKCIELCC----------GSVQGM--------RDRNPKIVEIPFNSTNK 492
Query: 591 RMSVIVRSEEGT---LLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 638
I +E+ + LL+ KGA + +R + NG +E KE E
Sbjct: 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552
Query: 639 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 698
G R L + L E +Y + + +L +G A+
Sbjct: 553 LGERVLGFCHFALPEDKYN---------------EGYPFDADEPNFPTTDLCFVGLMAMI 597
Query: 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758
D + VP+ + K AGIK+ ++TGD TA I + V I SE E+
Sbjct: 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGIISEGNETIE 647
Query: 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818
+ ++ G +L D S E L+D +
Sbjct: 648 DIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTE----------------VLDDILHYH- 690
Query: 819 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 867
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 691 -------TEIVFARTSPQQK---LIIVEGCQRQGAIVAVT---------GDGVNDSPALK 731
Query: 868 EADIGV--GISG 877
+ADIGV GISG
Sbjct: 732 KADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 3e-19
Identities = 53/309 (17%), Positives = 103/309 (33%), Gaps = 89/309 (28%)
Query: 571 TKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTK 630
+ ++ L F+ KR ++ G +SKGA + E LA+ + ++
Sbjct: 386 KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVL 444
Query: 631 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 690
I++YA+ GLR+L +A + + EK E
Sbjct: 445 SIIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWE 478
Query: 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 750
+G + D ++ E I + G+ + ++TGD++ G R++ +
Sbjct: 479 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRLGMG 528
Query: 751 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 810
+ S L+ + + ++ + L DG +A
Sbjct: 529 TNMYPSSA---------------------LLGTHKDANLASIPVEELIEKADG----FA- 562
Query: 811 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT-KTSSTTLA-IGDGANDVGMLQE 868
P+ K +VK + + GDG ND L++
Sbjct: 563 ---------------------GVFPEHKY---EIVKKLQERKHIVGMTGDGVNDAPALKK 598
Query: 869 ADIGVGISG 877
ADIG+ ++
Sbjct: 599 ADIGIAVAD 607
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-06
Identities = 45/260 (17%), Positives = 72/260 (27%), Gaps = 87/260 (33%)
Query: 265 TDCIYGA----VIFTGRDTKVFQNSTGPPSKRSK--VERRMDKIIYFLFGILVLMSFIGS 318
+ C G VI TG T + + S ++ + I F + + I
Sbjct: 200 STCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEI 259
Query: 319 IFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISL-- 376
I R +DG L+L IPI++
Sbjct: 260 IVMYPIQRRKYRDG----------------------------IDNLLVLLIGGIPIAMPT 291
Query: 377 YVSIE-------------IVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTI 423
+S+ I K + +I EE+ +D +
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAI-------------------------EEMAGMDVL 326
Query: 424 LSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA----RRKGSPLEEEVTEEQEDKA 479
SDKTGTLT N + K + G +V A ++ + D
Sbjct: 327 CSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPK 386
Query: 480 SIKG---------FNFEDER 490
+ FN D+R
Sbjct: 387 EARAGIREVHFLPFNPVDKR 406
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 3e-16
Identities = 50/316 (15%), Positives = 91/316 (28%), Gaps = 110/316 (34%)
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 631
V Y +L F K++ +V S +G + KGA + + E E+ +
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPIPEEVDQ 496
Query: 632 HI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 687
E+A G R+L +A + E
Sbjct: 497 AYKNKVAEFATRGFRSLGVARKR----------------------------------GEG 522
Query: 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747
+ +LG D ++ + + + G+ + +LTGD + A RQ+
Sbjct: 523 SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS----------RQL 572
Query: 748 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 807
+ + ++ L D + DG
Sbjct: 573 GLGTNIYNAERLG----------------------LGGGGDMPGSEVYDFVEAADG---- 606
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK------TSSTTLAIGDGAN 861
+A P+ K V +++ + T GDG N
Sbjct: 607 FA----------------------EVFPQHKYNVVEILQQRGYLVAMT-------GDGVN 637
Query: 862 DVGMLQEADIGVGISG 877
D L++AD G+ + G
Sbjct: 638 DAPSLKKADTGIAVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 8e-05
Identities = 35/321 (10%), Positives = 75/321 (23%), Gaps = 113/321 (35%)
Query: 264 NTDCIYGA----VIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFL-FGILVLMSF 315
++ G + TG +T + ++ I L ++ +
Sbjct: 248 SSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLI 307
Query: 316 IGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPIS 375
+ + L + +P+
Sbjct: 308 V--WVSSFYRSNPIVQI----------------------------LEFTLAITIIGVPVG 337
Query: 376 L--YVSIE-------------IVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQV 420
L V+ IV+ L +I E L V
Sbjct: 338 LPAVVTTTMAVGAAYLAKKKAIVQKLSAI-------------------------ESLAGV 372
Query: 421 DTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMAR------RKGSPLE----EE 470
+ + SDKTGTLT N + G ++ + ++ +
Sbjct: 373 EILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTACLAASRKKKGIDAIDKAFLKS 429
Query: 471 VTEEQEDKASIKG--------FNFEDERIM------NGSWVNEPHADVIQK--FLRLLAI 514
+ K+ + F+ ++++ G + K L +L
Sbjct: 430 LKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERI------TCVKGAPLFVLKT 483
Query: 515 CHTALPEVDEENGKISYEAES 535
P +E + +
Sbjct: 484 VEEDHPIPEEVDQAYKNKVAE 504
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 1e-15
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 32/131 (24%)
Query: 572 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER---LAENG--REFE 626
+ + ++ + F R+RMSV+V L+ KGA + + NG +
Sbjct: 51 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLD 110
Query: 627 EQTKEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 682
+ I + GLR + +A + L +E +
Sbjct: 111 DIMLRKIKRVTDTLNRQGLRVVAVATKYLPARE-----------------------GDYQ 147
Query: 683 EKIEKNLILLG 693
E +LIL G
Sbjct: 148 RADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 70.7 bits (172), Expect = 2e-12
Identities = 74/543 (13%), Positives = 162/543 (29%), Gaps = 155/543 (28%)
Query: 359 LHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELG 418
+ F T Y Y +I+ + + F+ + + D P + EE
Sbjct: 7 MDFETGEHQYQYK---------DILSVFEDAFV-DNFDCKDVQ-DMPKSILSK---EE-- 50
Query: 419 QVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSP-LEEEVTEEQED 477
+D I+ K + + S + V EV R L + EQ
Sbjct: 51 -IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLR-----INYKFLMSPIKTEQRQ 104
Query: 478 KASI-KGFNFEDERIMNGSWVNEPHADV--IQKFLRLLAICHTALPEVDEEN-------- 526
+ + + + + +R+ N + V + +V +Q +L+L AL E+
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPYLKL----RQALLELRPAKNVLIDGVL 159
Query: 527 --GKISYEAESPDEAAFVIAARELGFEFY----ERTQTSISV--------HELDPVTGTK 572
GK + ++ F+ + + + +V +++DP ++
Sbjct: 160 GSGKTWVALDVCLSYKVQ---CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 573 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 632
+ S ++ + + R + + E LL+L +V Q +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL----LNV--------------QNAKA 258
Query: 633 INEYADAGLRTLILAYRE------LDEKEYKQFNEE-----FTEAK------NSVSADRE 675
N + + + L+ R L + + T + + +
Sbjct: 259 WNAF-NLSCKILLTT-RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 676 ELAEEIAEKIEKNLI-LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734
+L E + ++ +++G D + DK+ T I
Sbjct: 317 DLPRE-VLTTNPRRLSIIAE-----SIRDG-LATWDNWKH-------VNCDKLTTIIESS 362
Query: 735 FAC---SLLRQGMRQVII---SSETPESKTLE------KSEDKSAAAAALKASVLHQLIR 782
+ R+ ++ + S+ P L D V+++L +
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPT-ILLSLIWFDVIKSDVM--------VVVNKLHK 413
Query: 783 GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVT 842
L++ K T ++ ++LEL + AL
Sbjct: 414 -YSLVEK------------QPKESTISIP----SIYLEL---------KVKLENEYALHR 447
Query: 843 RLV 845
+V
Sbjct: 448 SIV 450
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 3e-10
Identities = 105/734 (14%), Positives = 189/734 (25%), Gaps = 259/734 (35%)
Query: 9 HHFSRIHAFSCGKTSFK-GDHSLIGGPGFSRVVHCNDPESFEASVLN--------YSGNY 59
HH F G+ ++ D + F C D + S+L+ S +
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 60 VRTTKYTLATFF--PKALFEQFRRVANV----Y-FLICAIL------------------- 93
V T T + + ++F V V Y FL+ I
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKF--VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 94 ------SFTPLS-----PYSAVSNVL------PLVVVIGATM---GKEVLEDWRRKKQDI 133
F + PY + L V++ G + GK + +
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--VLGSGKTWVA--------L 168
Query: 134 EV-NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETT 192
+V + KV+ F W L + E L +L + + Y
Sbjct: 169 DVCLSYKVQCKMDFKIF----W--LNLK---NCNSPE---TVLEML-----QKLLYQIDP 211
Query: 193 NLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTP 252
N D +SN+ +R A L L+ + Y
Sbjct: 212 N--------WTSRSDHSSNI-----------KLRIHSIQAELRRL-----LKSKPY---E 244
Query: 253 QQLL-LRDSKLRNTDCI----YGA-VIFTGRDTKVFQNSTGPPSKRSKVERRMD------ 300
LL L + ++N ++ T R +V + + ++
Sbjct: 245 NCLLVLLN--VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302
Query: 301 ------KIIYFLFGIL---------VLMSFIGSIFFGIATREDLQDGKMKRW--YLRPDD 343
K + L +S I E ++DG W + +
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA---------ESIRDGLA-TWDNWKHVN- 351
Query: 344 TTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEI----VKILQSIFINQDLHMYY 399
D + + L+ L + + + I + L + +
Sbjct: 352 ----CDKLTTIIESSLNVLEPAEYRKM------FDRLSVFPPSAHIPTIL-----LSLIW 396
Query: 400 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAM 459
+ K ++ V L + E SI
Sbjct: 397 FDVIK----------SDVMVVVNKLHKY-SLVEKQPKES-TISI----PS---------- 430
Query: 460 ARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTAL 519
+ E+ + E++ ++ H ++ + L
Sbjct: 431 -------IYLELKVKLENEYAL-------------------HRSIVDHYNIPKTFDSDDL 464
Query: 520 PEVDEEN---GKISY---EAESPDEAAFVIAARE--LGFEFYERTQTSISVHELDPVTGT 571
+ I + E P+ R L F F E+ I H T
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLF---RMVFLDFRFLEQK---I-RH-----DST 512
Query: 572 KVERSYSLLNVL-EFSSSRKRMSVIVRSEE-------------GTLLLLSKGADSVMFER 617
S S+LN L + + + E L+ SK D +
Sbjct: 513 AWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572
Query: 618 LAENGREFEEQTKE 631
+AE+ FEE K+
Sbjct: 573 MAEDEAIFEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 3e-09
Identities = 71/495 (14%), Positives = 136/495 (27%), Gaps = 158/495 (31%)
Query: 1 MAGNRRKKHHFSRIHAFSCGKTSFKG----DHSLIGGPGFS----RVVHCNDPESFEASV 52
+ G GKT + + F + +CN PE+ +
Sbjct: 158 VLG---------------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 53 LN----YSGNYVRTTKYTLATFFP--------KALF--EQFRR----VANVY-------F 87
N+ + ++ + L + + + NV F
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262
Query: 88 LI-CAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWRRKKQDIEVNNRKVKVHCGE 146
+ C IL T + + V++ L AT L+ E +
Sbjct: 263 NLSCKIL-LT--TRFKQVTDFL-----SAATTTHISLDHHSMTLTPDE----------VK 304
Query: 147 GAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC---YVETTNLDGETNLKLK 203
K+ D + D+ E P L +++ S + + + N D KL
Sbjct: 305 SLL--LKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-----KLT 356
Query: 204 QALDATSNMHEDSNFQN-FK--AIIRCED---PNANLYTFVGSLELEEQQY---PLTPQQ 254
++++ N+ E + ++ F ++ P L + + L
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFP-PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 255 LLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVERRM--------------- 299
L+ + K +T I ++ + R +
Sbjct: 416 LVEKQPK-ESTISIPS----------IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464
Query: 300 -----DKIIYF----------------LFGILVL-MSFIGS--IFFGIATR------EDL 329
D+ Y LF ++ L F+ A L
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL 524
Query: 330 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSI 389
Q K + Y+ +D Y+ V A+L FL + S Y + L+
Sbjct: 525 QQLKFYKPYICDNDPK--YE---RLVNAILDFL---PKIEENLICSKYTDL-----LRIA 571
Query: 390 FINQDLHMYYEETDK 404
+ +D +EE K
Sbjct: 572 LMAED-EAIFEEAHK 585
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 838 KALVTRLVKTKTS-STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-SDIAIAQFR 895
K V +L+K K + IGDGA D+ AD +G G Q V + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 896 FLERLL 901
L L
Sbjct: 218 ELLGEL 223
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 853 TLAIGDGANDVGMLQEADIGV 873
+A GD ND ML EA G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
T+A+GDGAND+ M ++A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
TL +GDGAND+ M + A I +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 853 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 901
+A GDGAND+ ML+ A G+ ++ I + E LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 7e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 853 TLAIGDGANDVGMLQEADIGVG 874
T+A+GDGAND+ ML A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 7e-05
Identities = 8/51 (15%), Positives = 22/51 (43%)
Query: 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 888
L + + + +GD ND+ + + D+ V + + + V+++
Sbjct: 182 ARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.1 bits (95), Expect = 4e-04
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 752 ETPESKTLEKS----EDKSAAAAALKASV 776
E K L+ S D SA A A+KA++
Sbjct: 18 EKQALKKLQASLKLYADDSAPALAIKATM 46
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 4e-04
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 21/79 (26%)
Query: 610 ADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNS 669
AD + E E+ R++ E+ ++ + +ELD E +AK
Sbjct: 77 ADRLTQE--PESIRKWREEQRKRL---------------QELDAASKVMEQEWREKAKK- 118
Query: 670 VSADREELAEEIAEKIEKN 688
D EE + +E++EKN
Sbjct: 119 ---DLEEWNQRQSEQVEKN 134
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 6e-04
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
Query: 616 ERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRE 675
+RL E + ++ E A ++L+E ++ +E+ + K + +R
Sbjct: 96 KRLQELDAA-SKVMEQEWREKAK----------KDLEEW-NQRQSEQVEKNKIN---NRI 140
Query: 676 ELAEEIAEKIEKNLI 690
+ ++ + ++I
Sbjct: 141 A-DKAFYQQPDADII 154
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQ-KALVTRLVKTKTSSTTLAIGDGANDVGML 866
Y + ++ + + C + K V + + IGD DV
Sbjct: 121 YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQ-YIIMIGDSVTDVEAA 179
Query: 867 QEADIG 872
+ +D+
Sbjct: 180 KLSDLC 185
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.86 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.88 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.86 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.83 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.76 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.72 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.7 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.22 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.15 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.08 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.05 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.97 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.93 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.93 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.91 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.91 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.91 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.9 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.9 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.86 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.85 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.85 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.83 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.82 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.8 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.72 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.69 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.68 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.67 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.64 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.62 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.61 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.6 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.59 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.59 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.57 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.53 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.5 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.49 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.48 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.46 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.44 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.43 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.43 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.42 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.4 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.33 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.29 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.29 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.29 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.28 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.28 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.24 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.24 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.21 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.2 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.18 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.17 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.12 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.09 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.06 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.05 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.04 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.02 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.0 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.0 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.97 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.93 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.89 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.89 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.88 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.87 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.85 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.85 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.84 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.84 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.83 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.82 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.82 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.79 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.77 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.76 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.76 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.76 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.71 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.71 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.68 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.68 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.68 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.65 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.63 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.62 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.59 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.55 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.53 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.5 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.44 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.43 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.41 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.39 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.35 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.34 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.34 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.24 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.19 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.13 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.11 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.11 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.09 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.05 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.97 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.9 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.8 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.78 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.76 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.72 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.63 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.62 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.59 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.58 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.55 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.35 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.09 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.03 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.91 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.9 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 95.85 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.78 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.77 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.66 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.5 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.4 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.18 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.02 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.82 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 94.75 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.55 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.04 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 94.04 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 91.99 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 91.4 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 91.27 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 88.79 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 86.87 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 80.22 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-95 Score=906.87 Aligned_cols=688 Identities=19% Similarity=0.228 Sum_probs=547.0
Q ss_pred hhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc--CC-------CCCCcccchhhhhHhhhhhh
Q 002398 49 EASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP--LS-------PYSAVSNVLPLVVVIGATMG 119 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~vl~~~~i 119 (928)
++|+.+||+|.++..+...++ +.|++||.++++++++++++++++. +. ..+.+...++++++++++++
T Consensus 79 ~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 79 AELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 568899999999988875543 8999999999999999999988763 11 12245567788889999999
Q ss_pred HHHHHHHHHHhhhHHHh---cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCC
Q 002398 120 KEVLEDWRRKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDG 196 (928)
Q Consensus 120 ~~~~~d~~r~k~~~~~n---~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtG 196 (928)
..+++++|+.++.+.++ +.+++|+ |||++++|++++|+|||||.|++||.||||++||++++ +.||||+|||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~Vi-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTG 230 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVI-RDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTG 230 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCC
Confidence 99999999999876655 5789999 99999999999999999999999999999999999987 8999999999
Q ss_pred CCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEec
Q 002398 197 ETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTG 276 (928)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG 276 (928)
||.|+.|.+.... ..++...|++++||.+.+ |.+.|+|++||
T Consensus 231 ES~pv~K~~~~~~-------------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~tG 272 (1034)
T 3ixz_A 231 ESEPQTRSPECTH-------------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNTG 272 (1034)
T ss_pred CCCCeeccCCCcc-------------------------------------ccccccccceecceeEEe-ecceEEEEeeh
Confidence 9999999875421 123345566777777665 66999999999
Q ss_pred CCcce---eeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchh
Q 002398 277 RDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRA 353 (928)
Q Consensus 277 ~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
.+|.+ ..+....+.+++|+++.+++++.++..+.++++++.++++.++.. +|
T Consensus 273 ~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~---------------- 327 (1034)
T 3ixz_A 273 DRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY---------TF---------------- 327 (1034)
T ss_pred hhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------hH----------------
Confidence 99954 445566777889999999999999988888888877776543321 22
Q ss_pred HHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccc
Q 002398 354 AVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
...+..++.+++.+||++|+++++++..+++.+| +++++++|+++++|+||++++||||||||||+
T Consensus 328 ----~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~ 393 (1034)
T 3ixz_A 328 ----LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQ 393 (1034)
T ss_pred ----HHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCccc
Confidence 3367788999999999999999999999999998 88999999999999999999999999999999
Q ss_pred cceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHh
Q 002398 434 NSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 513 (928)
Q Consensus 434 n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 513 (928)
|+|+|.++++++..+....... . .+ ..........+.++.+++
T Consensus 394 n~m~v~~~~~~~~~~~~~~~~~------~-------------------~~------------~~~~~~~~~~~~l~~~~~ 436 (1034)
T 3ixz_A 394 NRMTVSHLWFDNHIHSADTTED------Q-------------------SG------------QTFDQSSETWRALCRVLT 436 (1034)
T ss_pred CeEEEEEEEECCccccccCccc------c-------------------cc------------cccCcCCHHHHHHHHHHH
Confidence 9999999998877654321100 0 00 000112345678899999
Q ss_pred hcceeeccccCCC--CceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCce
Q 002398 514 ICHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKR 591 (928)
Q Consensus 514 lc~~~~~~~~~~~--~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkr 591 (928)
+||++......+. .......++|.|.|+++++...+..... .+..|+.++.+||+|+|||
T Consensus 437 lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~rk~ 498 (1034)
T 3ixz_A 437 LCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------------------YRERFPKVCEIPFNSTNKF 498 (1034)
T ss_pred HhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH------------------HHHhCcceEEeeecCCCce
Confidence 9999876433211 1122346899999999999886643211 2357888999999999999
Q ss_pred EEEEEEeCC---CeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHH
Q 002398 592 MSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 659 (928)
Q Consensus 592 msviv~~~~---g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~ 659 (928)
|+++++.++ +++++|+|||||.|+++|... ++..++.+.+.+++|+.+|+|||++|||.++++++.+|
T Consensus 499 m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~ 578 (1034)
T 3ixz_A 499 QLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPG 578 (1034)
T ss_pred EEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccc
Confidence 999887643 789999999999999999742 34556778889999999999999999999998776554
Q ss_pred HHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 660 NEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 660 ~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
.... . +..+.+|+||+|+|+++++||+|++++++|++|+++||++||+|||+..||.++|+++||
T Consensus 579 ~~~~----------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi 643 (1034)
T 3ixz_A 579 YAFD----------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGI 643 (1034)
T ss_pred cccc----------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 3211 1 112456899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHH
Q 002398 740 LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 819 (928)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~ 819 (928)
..++...+ .+ .... ... . . ...........+++|..+.....+++.+
T Consensus 644 ~~~~~~~i-----------------~~-~~~~--~~~------~---~-~~~~~~~~~~~~~~g~~l~~~~~~~l~~--- 690 (1034)
T 3ixz_A 644 ISEGSETV-----------------ED-IAAR--LRV------P---V-DQVNRKDARACVINGMQLKDMDPSELVE--- 690 (1034)
T ss_pred CCCCchHH-----------------HH-HHHh--hCc------c---c-hhccccccceeEEecHhhhhCCHHHHHH---
Confidence 76432100 00 0000 000 0 0 0001223345788999887665544443
Q ss_pred HHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--c
Q 002398 820 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--L 897 (928)
Q Consensus 820 ~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l 897 (928)
....++..+|+|++|+||..+|+.+++ .++.|+|+|||.||++||+.||+||||++++.+.++++||+++.++++ +
T Consensus 691 -~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI 768 (1034)
T 3ixz_A 691 -ALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASI 768 (1034)
T ss_pred -HHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHH
Confidence 334456679999999999999999998 799999999999999999999999999656677799999999998777 6
Q ss_pred chhhhcchhhhHHHhhhhheeeeecccccc
Q 002398 898 ERLLLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 898 ~~lll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
..+ +.|||++|.|+++++.|.+++|++.+
T Consensus 769 ~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~ 797 (1034)
T 3ixz_A 769 VTG-VEQGRLIFDNLKKSIAYTLTKNIPEL 797 (1034)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666 88999999999999999999998754
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-96 Score=914.94 Aligned_cols=686 Identities=20% Similarity=0.246 Sum_probs=539.7
Q ss_pred hhcccCCCCCeeeccc-cchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc--CC-------CCCCcccchhhhhHhhhhh
Q 002398 49 EASVLNYSGNYVRTTK-YTLATFFPKALFEQFRRVANVYFLICAILSFTP--LS-------PYSAVSNVLPLVVVIGATM 118 (928)
Q Consensus 49 ~~~~~~~g~N~i~~~k-y~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~--~~-------~~~~~~~~~~l~~vl~~~~ 118 (928)
++|+++||+|.++.++ .++| +.|++||.++++++++++++++++. +. ..+.+...+++++++++++
T Consensus 74 ~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 149 (1028)
T 2zxe_A 74 KEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTG 149 (1028)
T ss_dssp HHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence 5678899999999886 4555 8899999999999999999998764 11 0123455677888999999
Q ss_pred hHHHHHHHHHHhhhHHH---hcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCC
Q 002398 119 GKEVLEDWRRKKQDIEV---NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLD 195 (928)
Q Consensus 119 i~~~~~d~~r~k~~~~~---n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~Lt 195 (928)
+.++++++|+.++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ |+||||+||
T Consensus 150 ~~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LT 224 (1028)
T 2zxe_A 150 CFSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLT 224 (1028)
T ss_dssp HHHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeeEEE-ECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccC
Confidence 99999999887776554 47899999 99999999999999999999999999999999999975 999999999
Q ss_pred CCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEe
Q 002398 196 GETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFT 275 (928)
Q Consensus 196 GEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~t 275 (928)
|||.|+.|.+++.. ..+++.+|++++||.+.+ |+++|+|++|
T Consensus 225 GES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~t 266 (1028)
T 2zxe_A 225 GESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYT 266 (1028)
T ss_dssp SCCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEEC
T ss_pred CCCcceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEEe
Confidence 99999999876432 114677899999999997 8999999999
Q ss_pred cCCcce---eeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcch
Q 002398 276 GRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKR 352 (928)
Q Consensus 276 G~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 352 (928)
|.+|.+ +++...++.+++++++.+++++.+++++.+++|++.++++.+... +|+
T Consensus 267 G~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~---------~~~-------------- 323 (1028)
T 2zxe_A 267 GDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------SWL-------------- 323 (1028)
T ss_dssp GGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------CHH--------------
T ss_pred ccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---------cHH--------------
Confidence 999965 445566778899999999999999999998888888776543211 232
Q ss_pred hHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCccc
Q 002398 353 AAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLT 432 (928)
Q Consensus 353 ~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT 432 (928)
..+..++.+++.+||++|+++++++..+++.+| +++++++|+++++|+||++++||||||||||
T Consensus 324 ------~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT 387 (1028)
T 2zxe_A 324 ------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLT 387 (1028)
T ss_dssp ------HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCB
T ss_pred ------HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCC
Confidence 145666778889999999999999999999988 8899999999999999999999999999999
Q ss_pred ccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHH
Q 002398 433 CNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 512 (928)
Q Consensus 433 ~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 512 (928)
+|+|+|.++++++..|.....+ + ..+. .........+.++.++
T Consensus 388 ~n~m~v~~~~~~~~~~~~~~~~-----------~--------------~~~~------------~~~~~~~~~~~l~~~~ 430 (1028)
T 2zxe_A 388 QNRMTVAHMWFDNQIHEADTTE-----------N--------------QSGA------------AFDKTSATWSALSRIA 430 (1028)
T ss_dssp CSSCEEEEEEETTEEEECCCCT-----------T--------------CCSC------------CCCSSCHHHHHHHHHH
T ss_pred CCeEEEEEEEECCeeeeccCCC-----------C--------------cccc------------ccccCCHHHHHHHHHH
Confidence 9999999999887665321100 0 0000 0011234566888999
Q ss_pred hhcceeeccccCCCC--ceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCc
Q 002398 513 AICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 590 (928)
Q Consensus 513 ~lc~~~~~~~~~~~~--~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rk 590 (928)
++||++..+...+.. ...+..++|+|.||+++++..|.... +.+..|+++..+||+|+||
T Consensus 431 alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------------------~~~~~~~~~~~~pF~s~rk 492 (1028)
T 2zxe_A 431 ALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------------------GMRDRNPKIVEIPFNSTNK 492 (1028)
T ss_dssp HHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------------------HHHHHSCEEEEECCCTTTC
T ss_pred HhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH------------------HHHHhCceEEEeccCcccc
Confidence 999998765332111 01123689999999999987532110 0124578889999999999
Q ss_pred eEEEEEEeC---CCeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHH
Q 002398 591 RMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 658 (928)
Q Consensus 591 rmsviv~~~---~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~ 658 (928)
||+++++.+ ++++++|+||||+.|+++|... ++..++.+.+++++|+++|+|||++|||+++++++.+
T Consensus 493 ~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~ 572 (1028)
T 2zxe_A 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNE 572 (1028)
T ss_dssp EEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCT
T ss_pred eEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccc
Confidence 999999974 5788999999999999999642 2345677888999999999999999999998654332
Q ss_pred HHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC
Q 002398 659 FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 738 (928)
Q Consensus 659 ~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~g 738 (928)
+.+ .+++ ..+.+|.|++|+|+++++||+|++++++|++|+++||++||+|||+..||.++|++||
T Consensus 573 ~~~----------~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lg 637 (1028)
T 2zxe_A 573 GYP----------FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637 (1028)
T ss_dssp TCC----------CCTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred ccc----------cchh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcC
Confidence 100 0110 0123478999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHH
Q 002398 739 LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 818 (928)
Q Consensus 739 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~ 818 (928)
|..++...+ .+ .... ... ....+ ........+++|+.+....++++.
T Consensus 638 i~~~~~~~i-----------------~~-~~~~--~~~------~~~~~----~~~~~~~~vi~G~~l~~~~~~~l~--- 684 (1028)
T 2zxe_A 638 IISEGNETI-----------------ED-IAAR--LNI------PIGQV----NPRDAKACVVHGSDLKDLSTEVLD--- 684 (1028)
T ss_dssp SSCTTCCCH-----------------HH-HHHH--TTC------CGGGS----CGGGCCEEEEEHHHHTTCCHHHHH---
T ss_pred CCCCCchhH-----------------HH-HHhh--cCc------chhhc----cccccceEEEEcHHhhhCCHHHHH---
Confidence 985443210 00 0000 000 00000 111224578899988766554443
Q ss_pred HHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--
Q 002398 819 LELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF-- 896 (928)
Q Consensus 819 ~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~-- 896 (928)
.+...++.++|||++|+||..+|+.+++ .|+.|+|+|||.||++||++|||||||+.+..+.|+++||+++.+.++
T Consensus 685 -~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~ 762 (1028)
T 2zxe_A 685 -DILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFAS 762 (1028)
T ss_dssp -HHHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHH
T ss_pred -HHHhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHH
Confidence 3444566789999999999999999998 789999999999999999999999999534445589999999998544
Q ss_pred cchhhhcchhhhHHHhhhhheeeeeccccc
Q 002398 897 LERLLLVHGHWCYRRISSMVCFTLKMLIDK 926 (928)
Q Consensus 897 l~~lll~~gr~~~~~i~~~i~~~~~~n~~~ 926 (928)
+.++ +.|||++|.|+++++.|++++|+.+
T Consensus 763 I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~ 791 (1028)
T 2zxe_A 763 IVTG-VEEGRLIFDNLKKSIAYTLTSNIPE 791 (1028)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888 8999999999999999999999765
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-94 Score=903.30 Aligned_cols=711 Identities=21% Similarity=0.245 Sum_probs=529.3
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhccc-CCCC-----CCcccchhhhhHhhhhhhHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTP-LSPY-----SAVSNVLPLVVVIGATMGKE 121 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~-~~~~-----~~~~~~~~l~~vl~~~~i~~ 121 (928)
.++|+++||+|.++.+++..++ +.|++||+++++++|++++++++++ +.+. ..|...+.++++++++.+..
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 106 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHH
Confidence 3567889999999998764443 8999999999999999999999876 3221 12333444556667777788
Q ss_pred HHHHHHHHhhhH---HHhcceEEEEeCCCe--EEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCC
Q 002398 122 VLEDWRRKKQDI---EVNNRKVKVHCGEGA--FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDG 196 (928)
Q Consensus 122 ~~~d~~r~k~~~---~~n~~~~~v~~r~g~--~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtG 196 (928)
.+++++..++.+ ++.+.+++|+ |||. +++|++++|+|||||.|++||.|||||+|+++++ +.|+||||+|||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~-R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTG 183 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTG 183 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEE-BTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEE-eCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccC
Confidence 888887666544 4457899999 9887 6999999999999999999999999999987543 239999999999
Q ss_pred CCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEec
Q 002398 197 ETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTG 276 (928)
Q Consensus 197 Es~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG 276 (928)
||.|+.|.+++... | ...+.+.+|++++||.+.+ |+++|+|++||
T Consensus 184 ES~pv~K~~~~~~~-------------------~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG 228 (995)
T 3ar4_A 184 ESVSVIKHTEPVPD-------------------P---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTG 228 (995)
T ss_dssp CCSCEEECCSCCCC-------------------T---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECG
T ss_pred CCcceeccccccCC-------------------c---------------ccCcccccceEecCCEEEc-ceEEEEEEEcC
Confidence 99999999864321 0 1123567899999999998 89999999999
Q ss_pred CCccee---eccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchh
Q 002398 277 RDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRA 353 (928)
Q Consensus 277 ~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 353 (928)
.+|+++ +....++.+++++++.+++++.+++++++++|++.++++..+...... ..+|+
T Consensus 229 ~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------------- 290 (995)
T 3ar4_A 229 VSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH---GGSWI--------------- 290 (995)
T ss_dssp GGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSS---SSCHH---------------
T ss_pred cchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cchHH---------------
Confidence 999764 445567788999999999999999988888887766554321110000 00121
Q ss_pred HHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccc
Q 002398 354 AVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTC 433 (928)
Q Consensus 354 ~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~ 433 (928)
......|..++.+++.+||++|+++++++..+++.+| +++++++|+++++|+||++++||||||||||+
T Consensus 291 -~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~ 359 (995)
T 3ar4_A 291 -RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTT 359 (995)
T ss_dssp -HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBC
T ss_pred -HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCccc
Confidence 1233456778899999999999999999999999888 78899999999999999999999999999999
Q ss_pred cceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHh
Q 002398 434 NSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 513 (928)
Q Consensus 434 n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 513 (928)
|+|+|.++++.+..++..........+....+|... . ...+........+.+..++.+++
T Consensus 360 n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----------------~----~~~~~~~~~~~~~~~~~l~~~~a 419 (995)
T 3ar4_A 360 NQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGE----------------V----LKNDKPIRSGQFDGLVELATICA 419 (995)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCC----------------E----EETTEECCGGGCHHHHHHHHHHH
T ss_pred CceEEEEEEecCcccCcccccceeeccCCCcCCccc----------------c----ccccccccccccHHHHHHHHHHH
Confidence 999999998765433210000000000000011000 0 00000011122345678899999
Q ss_pred hcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEE
Q 002398 514 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 593 (928)
Q Consensus 514 lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrms 593 (928)
+||++....++..+.+ ...++|+|.||+.++++.|+ +... ...+...+............|++++++||+|+|||||
T Consensus 420 lc~~~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~ms 496 (995)
T 3ar4_A 420 LCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNTE-VRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMS 496 (995)
T ss_dssp HSCCCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCCC-CTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEE
T ss_pred HcCCCcccccCCCCce-eecCCccHHHHHHHHHHcCC-cccc-ccccccccccccchhhhhhhCceEEEeecCCCCCeeE
Confidence 9999876544322222 23589999999999999887 2110 0000000000000001235689999999999999999
Q ss_pred EEEEeCCC-----eEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHH--HhccCeEEEEEEEecCHHHHH
Q 002398 594 VIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEY--ADAGLRTLILAYRELDEKEYK 657 (928)
Q Consensus 594 viv~~~~g-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--~~~Glr~l~~A~k~l~~~e~~ 657 (928)
|+++.++| ++.+|+||||+.|+++|... ++..++.+.+++++| +++|+|||++|||+++..+.
T Consensus 497 vi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~- 575 (995)
T 3ar4_A 497 VYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE- 575 (995)
T ss_dssp EEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG-
T ss_pred EEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc-
Confidence 99998766 68999999999999999642 234566788889999 99999999999999864210
Q ss_pred HHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 658 QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 658 ~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
...+ .+ ...++.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.++|+++
T Consensus 576 ---------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~l 640 (995)
T 3ar4_A 576 ---------EMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 640 (995)
T ss_dssp ---------GCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred ---------cccc-cc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc
Confidence 0000 01 11346789999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHH
Q 002398 738 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 817 (928)
Q Consensus 738 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~ 817 (928)
||...+..+ . ..+++|+.+..+.++++.+.
T Consensus 641 gi~~~~~~i--------~------------------------------------------~~~~~g~~~~~l~~~~~~~~ 670 (995)
T 3ar4_A 641 GIFGENEEV--------A------------------------------------------DRAYTGREFDDLPLAEQREA 670 (995)
T ss_dssp TSSCTTCCC--------T------------------------------------------TTEEEHHHHHTSCHHHHHHH
T ss_pred CcCCCCCcc--------c------------------------------------------ceEEEchhhhhCCHHHHHHH
Confidence 997643210 0 01556666654444333333
Q ss_pred HHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc-
Q 002398 818 FLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF- 896 (928)
Q Consensus 818 ~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~- 896 (928)
+. +..+|||++|+||..+|+.+++ .|+.|+|+|||.||++||++|||||||+ +..+.|+++||+++.++++
T Consensus 671 ~~------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~ 742 (995)
T 3ar4_A 671 CR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFS 742 (995)
T ss_dssp HH------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHH
T ss_pred Hh------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 32 2459999999999999999998 6899999999999999999999999994 4444589999999987544
Q ss_pred -cchhhhcchhhhHHHhhhhheeeeeccccc
Q 002398 897 -LERLLLVHGHWCYRRISSMVCFTLKMLIDK 926 (928)
Q Consensus 897 -l~~lll~~gr~~~~~i~~~i~~~~~~n~~~ 926 (928)
+.++ +.|||++|+|+++++.|++++|+..
T Consensus 743 ~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~ 772 (995)
T 3ar4_A 743 TIVAA-VEEGRAIYNNMKQFIRYLISSNVGE 772 (995)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888 8999999999999999999999854
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-90 Score=837.25 Aligned_cols=599 Identities=18% Similarity=0.190 Sum_probs=480.4
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCCcccchhhhhHhhhhhhHHHHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLSPYSAVSNVLPLVVVIGATMGKEVLEDWR 127 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~~~~i~~~~~d~~ 127 (928)
.++|+++||+|.++..++++| +.|++||..+++++++++++++++ .+.|..+..++++++++++.+++++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~----~g~~~~~~~i~~vv~i~~~i~~~qe~~ 164 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAG----LEDWVDFGVICGLLLLNAVVGFVQEFQ 164 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTT----CSCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH----HHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999998877 788899999999999999999987 344555566777888899999999999
Q ss_pred HHhhhHHHh---cceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeec
Q 002398 128 RKKQDIEVN---NRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQ 204 (928)
Q Consensus 128 r~k~~~~~n---~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~ 204 (928)
..++.+.++ +.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++. +.||||+|||||.|+.|.
T Consensus 165 a~~a~~~L~~l~~~~a~V~-RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~---l~VDES~LTGES~PV~K~ 240 (920)
T 1mhs_A 165 AGSIVDELKKTLALKAVVL-RDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAF---LQVDQSALTGESLAVDKH 240 (920)
T ss_dssp HHHHHHTTTTCCCSSCEEE-CSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSC---CEEBCTTTSSCCCCEECC
T ss_pred HHHHHHHhhccCCCEEEEE-ECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCce---eeeeccccCCCCcceEec
Confidence 998877665 5789999 999999999999999999999999999999999999821 699999999999999998
Q ss_pred ccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceee-
Q 002398 205 ALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ- 283 (928)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~- 283 (928)
+++.. |+||++.+ |++.++|++||.+|.+++
T Consensus 241 ~gd~v---------------------------~sGT~v~~---------------------G~~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 241 KGDQV---------------------------FASSAVKR---------------------GEAFVVITATGDNTFVGRA 272 (920)
T ss_dssp SSCEE---------------------------CSCBCCSC---------------------CCEEEEEEECSTTCSTTTT
T ss_pred CCCee---------------------------ecCceEec---------------------ceEEEEEEEeCCcCHHHHH
Confidence 75432 44444443 559999999999997655
Q ss_pred --ccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHHHHHH
Q 002398 284 --NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHF 361 (928)
Q Consensus 284 --~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 361 (928)
....++.+++++++.++++..++++++++++++.++.+.+ .. .+| ...+
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~---~~------~~~--------------------~~~l 323 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY---RS------NPI--------------------VQIL 323 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT---TT------CCH--------------------HHHH
T ss_pred HHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC------CcH--------------------HHHH
Confidence 3445667789999999999988887777666554432211 00 011 2356
Q ss_pred HHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceEEEEE
Q 002398 362 LTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKC 441 (928)
Q Consensus 362 ~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~ 441 (928)
..++.+++.+||++|+++++++..+++.++ +++++++|+++.+|.||++++||||||||||+|+|++.++
T Consensus 324 ~~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~ 393 (920)
T 1mhs_A 324 EFTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDP 393 (920)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCC
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEE
Confidence 778889999999999999999999999988 7889999999999999999999999999999999999876
Q ss_pred EEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeecc
Q 002398 442 SIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPE 521 (928)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~ 521 (928)
+..+. +. + .+++.+.++|+....
T Consensus 394 ~~~~g-~~--------------------------------------------------~-----~~ll~~a~l~~~~~~- 416 (920)
T 1mhs_A 394 YTVAG-VD--------------------------------------------------P-----EDLMLTACLAASRKK- 416 (920)
T ss_dssp BCCSC-CC--------------------------------------------------C-----THHHHHHHHSCCCSS-
T ss_pred eecCC-CC--------------------------------------------------H-----HHHHHHHHHhcCCcc-
Confidence 43211 00 0 034556677765321
Q ss_pred ccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCC
Q 002398 522 VDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG 601 (928)
Q Consensus 522 ~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g 601 (928)
. ++||+|.|+++++++.+... .....|++++.+||+|.||||+++++.++|
T Consensus 417 ----~------~~~P~e~Al~~~~~~~~~~~-------------------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g 467 (920)
T 1mhs_A 417 ----K------GIDAIDKAFLKSLKYYPRAK-------------------SVLSKYKVLQFHPFDPVSKKVVAVVESPQG 467 (920)
T ss_dssp ----C------SCCSHHHHHHHHHHHSSSCC-------------------GGGSCCCEEEEEEEETTTTEEEEEECCSSS
T ss_pred ----c------CCChHHHHHHHHHHhcccch-------------------hhccccceeEEeeccCCCCeEEEEEEeCCC
Confidence 0 14999999999998765310 012457788999999999999999998888
Q ss_pred eEEEEEecCcHHHHHHHhhc---chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHH
Q 002398 602 TLLLLSKGADSVMFERLAEN---GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 678 (928)
Q Consensus 602 ~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~ 678 (928)
+.++|+||||+.|+++|... ++..++.+.+.+++|+.+|+||+++|+|..
T Consensus 468 ~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~--------------------------- 520 (920)
T 1mhs_A 468 ERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------------------------- 520 (920)
T ss_dssp SCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---------------------------
T ss_pred cEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc---------------------------
Confidence 88999999999999999742 334566788889999999999999998731
Q ss_pred HHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCcccc
Q 002398 679 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 758 (928)
Q Consensus 679 ~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~ 758 (928)
|.+++|+|+++++||+|++++++|++|+++||++||+|||+..||.+||+++||.... ++... ..
T Consensus 521 -------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~-----~~~~~---~~ 585 (920)
T 1mhs_A 521 -------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI-----YNAER---LG 585 (920)
T ss_dssp -------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC-----CCSSS---SS
T ss_pred -------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc-----cCccc---ee
Confidence 3789999999999999999999999999999999999999999999999999996421 00000 00
Q ss_pred ccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccH
Q 002398 759 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK 838 (928)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK 838 (928)
+... . .++++.+... .. +..+|+|++|+||
T Consensus 586 ~~g~----------------------~--------------~~~~~el~~~------------~~--~~~V~arv~P~~K 615 (920)
T 1mhs_A 586 LGGG----------------------G--------------DMPGSEVYDF------------VE--AADGFAEVFPQHK 615 (920)
T ss_dssp SCBC----------------------C--------------CGGGGGGGTT------------TT--TTSCEESCCSTHH
T ss_pred ecCc----------------------c--------------cCCHHHHHHH------------Hh--hCeEEEEeCHHHH
Confidence 0000 0 0011111111 11 2239999999999
Q ss_pred HHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHhhhhh
Q 002398 839 ALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMV 916 (928)
Q Consensus 839 ~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i~~~i 916 (928)
..+|+.+|+ .|+.|+|+|||.||++||++|||||||+ +..+.|+++||+++.+.++ +.++ +.+||++|+|+++++
T Consensus 616 ~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i 692 (920)
T 1mhs_A 616 YNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYV 692 (920)
T ss_dssp HHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999998 7999999999999999999999999995 3445599999999997655 8888 899999999999999
Q ss_pred eeeeeccccc
Q 002398 917 CFTLKMLIDK 926 (928)
Q Consensus 917 ~~~~~~n~~~ 926 (928)
.|.++.|+..
T Consensus 693 ~~~l~~n~~~ 702 (920)
T 1mhs_A 693 VYRIALSIHL 702 (920)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-89 Score=838.39 Aligned_cols=606 Identities=19% Similarity=0.221 Sum_probs=472.8
Q ss_pred hhhcccCCCCCeeeccccchhhhhHHHHHHHHhhhHHHHHHHHHHHhcccCC---CCCCcccchhhhhHhhhhhhHHHHH
Q 002398 48 FEASVLNYSGNYVRTTKYTLATFFPKALFEQFRRVANVYFLICAILSFTPLS---PYSAVSNVLPLVVVIGATMGKEVLE 124 (928)
Q Consensus 48 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~~l~~~il~~~~~~---~~~~~~~~~~l~~vl~~~~i~~~~~ 124 (928)
.++|+++||+|.++..++++| +.|++||.+|++++++++++++++... ....|...+.++++++++.+.++++
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIE 113 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTT
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 367889999999999998777 667789999999999999999987411 1113444556677778888889999
Q ss_pred HHHHHhhhHHH---hcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcce
Q 002398 125 DWRRKKQDIEV---NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLK 201 (928)
Q Consensus 125 d~~r~k~~~~~---n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~ 201 (928)
+++..++.+.+ .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|++|++ +.||||+|||||.|+
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv 188 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVL-RDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPV 188 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCC-CSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCC
T ss_pred HHHHHHHHHHHhccCCCeEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcce
Confidence 99887776654 46789999 99999999999999999999999999999999999985 789999999999999
Q ss_pred eecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcce
Q 002398 202 LKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV 281 (928)
Q Consensus 202 ~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~ 281 (928)
.|.+++ ++++||.+.+ |++.++|++||.+|.+
T Consensus 189 ~K~~g~-----------------------------------------------~v~~GT~v~~-G~~~~~V~~tG~~T~~ 220 (885)
T 3b8c_A 189 TKHPGQ-----------------------------------------------EVFSGSTCKQ-GEIEAVVIATGVHTFF 220 (885)
T ss_dssp CBSSCC-----------------------------------------------CCCSCCCCCS-CCCCCBCCSCTTTTTS
T ss_pred EecCCC-----------------------------------------------ccccCeEEee-eEEEEEEEEcCcccHH
Confidence 998754 3455555554 5689999999999976
Q ss_pred eec---cCCCCCcccHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHhhhcccccCcccccccccCCCCCCccCcchhHHHH
Q 002398 282 FQN---STGPPSKRSKVERRMDKIIYFLFGI-LVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAA 357 (928)
Q Consensus 282 ~~~---~~~~~~k~s~l~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 357 (928)
++. ... ..+++++++.+++++.+++.+ .+.++++.+++|.+.. . +|.
T Consensus 221 g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~------------------- 271 (885)
T 3b8c_A 221 GKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQR--R-------KYR------------------- 271 (885)
T ss_dssp TTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTC--S-------CST-------------------
T ss_pred HHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--C-------cHH-------------------
Confidence 543 333 467899999999998764332 2223332222221100 0 222
Q ss_pred HHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCCCcccccceE
Q 002398 358 VLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSME 437 (928)
Q Consensus 358 ~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 437 (928)
..+..++.+++.+||++||+++++...+++.++ +++++++|+++.+|.||++++||||||||||+|+|+
T Consensus 272 -~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~ 340 (885)
T 3b8c_A 272 -DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLS 340 (885)
T ss_dssp -THHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCC
T ss_pred -HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceE
Confidence 157788999999999999999999999998888 899999999999999999999999999999999999
Q ss_pred EEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcce
Q 002398 438 FIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHT 517 (928)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~ 517 (928)
+.++.+. .++.+. ..++++...++|+.
T Consensus 341 v~~~~~~--~~~~~~---------------------------------------------------~~~~ll~~aa~~~~ 367 (885)
T 3b8c_A 341 VDKNLVE--VFCKGV---------------------------------------------------EKDQVLLFAAMASR 367 (885)
T ss_dssp CCSCCCC--SSCSST---------------------------------------------------THHHHHHHHHHHCC
T ss_pred EEEEEEe--ccCCCC---------------------------------------------------CHHHHHHHHHHHhC
Confidence 8532210 010000 01245677788875
Q ss_pred eeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEE
Q 002398 518 ALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 597 (928)
Q Consensus 518 ~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 597 (928)
.. ++||.|.|+++++.+.. . ....|++++.+||+|.||||+++++
T Consensus 368 ~~-------------~~~p~~~Al~~~~~~~~-----------------~-----~~~~~~~~~~~pF~s~~k~~sv~~~ 412 (885)
T 3b8c_A 368 VE-------------NQDAIDAAMVGMLADPK-----------------E-----ARAGIREVHFLPFNPVDKRTALTYI 412 (885)
T ss_dssp SS-------------SCCSHHHHHHHTTCCTT-----------------C-----CCCSSCCBCCCCCCTTTCCCCCBBC
T ss_pred CC-------------CCCchHHHHHHHhhchh-----------------h-----HhhcCceeecccCCcccceEEEEEE
Confidence 31 36999999998764210 0 0234667889999999999999998
Q ss_pred eCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHH
Q 002398 598 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREEL 677 (928)
Q Consensus 598 ~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~ 677 (928)
..+|+.++|+||||+.|+++|... ...++.+.+.+++|+.+|+||+++|+|++++++.
T Consensus 413 ~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~--------------------- 470 (885)
T 3b8c_A 413 DGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK--------------------- 470 (885)
T ss_dssp SSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS---------------------
T ss_pred ecCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccc---------------------
Confidence 878888899999999999998642 2345567788999999999999999998865321
Q ss_pred HHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccc
Q 002398 678 AEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK 757 (928)
Q Consensus 678 ~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~ 757 (928)
+..|++++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..+.. +..
T Consensus 471 -----~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~----- 535 (885)
T 3b8c_A 471 -----ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----PSS----- 535 (885)
T ss_dssp -----SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-----TTS-----
T ss_pred -----cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-----Ccc-----
Confidence 23568999999999999999999999999999999999999999999999999999964210 000
Q ss_pred cccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhH-HHHHHHHHHHhhcCCeEEEEecCcc
Q 002398 758 TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE-DDVKDLFLELAIGCASVICCRSSPK 836 (928)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~-~~~~~~~~~~~~~~~~~v~~r~sp~ 836 (928)
++.|..++..+. .++.+.. . +..+|+|++|+
T Consensus 536 ------------------------------------------~l~g~~~~~~~~~~~l~~~~----~--~~~v~arv~P~ 567 (885)
T 3b8c_A 536 ------------------------------------------ALLGTHKDANLASIPVEELI----E--KADGFAGVFPE 567 (885)
T ss_dssp ------------------------------------------SCCBGGGGTTSCCSCHHHHH----H--TSCCEECCCHH
T ss_pred ------------------------------------------eeeccccccccchhHHHHHH----h--hCcEEEEECHH
Confidence 001111110000 0111111 1 22399999999
Q ss_pred cHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHhhh
Q 002398 837 QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISS 914 (928)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i~~ 914 (928)
||..+|+.+|+ .|+.|+|+|||.||++||++|||||||+ +..+.|+++||+++.++++ +..+ +.+||++|+|+++
T Consensus 568 ~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~ 644 (885)
T 3b8c_A 568 HKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKN 644 (885)
T ss_dssp HHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHH-HHHHHHHHHHHHH
Confidence 99999999998 7899999999999999999999999995 4455589999999998666 7777 8999999999999
Q ss_pred hheeeeeccccc
Q 002398 915 MVCFTLKMLIDK 926 (928)
Q Consensus 915 ~i~~~~~~n~~~ 926 (928)
++.|.++.|+..
T Consensus 645 ~i~~~l~~n~~~ 656 (885)
T 3b8c_A 645 YTIYAVSITIRI 656 (885)
T ss_dssp HHHHHHHHTTTT
T ss_pred HHHHHHHHHHHH
Confidence 999999999854
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-72 Score=672.88 Aligned_cols=490 Identities=20% Similarity=0.257 Sum_probs=401.4
Q ss_pred hHhhhhhhHHHHHHHHHHhhhHHH------hcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCc
Q 002398 112 VVIGATMGKEVLEDWRRKKQDIEV------NNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEA 185 (928)
Q Consensus 112 ~vl~~~~i~~~~~d~~r~k~~~~~------n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~ 185 (928)
+++++..+.+++|.+.++|+.+.+ .+.++++++|||++++|++++|+|||+|+|++||.|||||+|++|+
T Consensus 193 ~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~---- 268 (736)
T 3rfu_A 193 VITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGR---- 268 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECc----
Confidence 344445566777777777765443 3678888845999999999999999999999999999999999998
Q ss_pred eEEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecC
Q 002398 186 ICYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNT 265 (928)
Q Consensus 186 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t 265 (928)
++||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 269 -~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~------------------- 301 (736)
T 3rfu_A 269 -SFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS------------------- 301 (736)
T ss_dssp -EEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC-------------------
T ss_pred -eEeeecccCCccccEEeccCCcC---------------------------CCceEeccce-------------------
Confidence 89999999999999999987754 6666666655
Q ss_pred CeEEEEEEEecCCc---ceeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCC
Q 002398 266 DCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPD 342 (928)
Q Consensus 266 ~~~~g~Vv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~ 342 (928)
+.+.|++||.+| ++.+....++.+++++++.+++++.++++++++++++++++|.++.... .|.
T Consensus 302 --~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~~~---- 368 (736)
T 3rfu_A 302 --FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------ALS---- 368 (736)
T ss_dssp --CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------STT----
T ss_pred --EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------hHH----
Confidence 899999999999 4555556677788999999999999999999999999998887654211 121
Q ss_pred CCCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeE
Q 002398 343 DTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDT 422 (928)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~ 422 (928)
..+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++|+
T Consensus 369 ----------------~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 369 ----------------YGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp ----------------HHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCE
T ss_pred ----------------HHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCCE
Confidence 267888999999999999999999999999888 789999999999999999999
Q ss_pred EEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCCh
Q 002398 423 ILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHA 502 (928)
Q Consensus 423 i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (928)
||||||||||+|+|++.++...+.. +
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~~------~------------------------------------------------ 448 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDFV------E------------------------------------------------ 448 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSSC------H------------------------------------------------
T ss_pred EEEeCCCCCcCCceEEEEEEecCCC------H------------------------------------------------
Confidence 9999999999999999998733210 0
Q ss_pred HHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeee
Q 002398 503 DVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNV 582 (928)
Q Consensus 503 ~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~ 582 (928)
.+++...+.+. +.++||++.|+++++++.|+.+. ..
T Consensus 449 ---~~~l~~aa~le--------------~~s~hPla~Aiv~~a~~~~~~~~---------------------------~~ 484 (736)
T 3rfu_A 449 ---DNALALAAALE--------------HQSEHPLANAIVHAAKEKGLSLG---------------------------SV 484 (736)
T ss_dssp ---HHHHHHHHHHH--------------HSSCCHHHHHHHHHHHTTCCCCC---------------------------CC
T ss_pred ---HHHHHHHHHHh--------------hcCCChHHHHHHHHHHhcCCCcc---------------------------Cc
Confidence 01222222111 12569999999999998775432 12
Q ss_pred ecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHH
Q 002398 583 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEE 662 (928)
Q Consensus 583 ~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~ 662 (928)
.+|++.+++... ... +|+. +.+|+++.+.+.... .....+.+++++.+|+|++++|
T Consensus 485 ~~f~~~~g~gv~-~~~-~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va--------------- 540 (736)
T 3rfu_A 485 EAFEAPTGKGVV-GQV-DGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMA--------------- 540 (736)
T ss_dssp SCCCCCTTTEEE-ECS-SSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEE---------------
T ss_pred ccccccCCceEE-EEE-CCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEE---------------
Confidence 356666554322 222 3432 445998877543221 2345667889999999999999
Q ss_pred HHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccC
Q 002398 663 FTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 742 (928)
Q Consensus 663 ~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~ 742 (928)
.|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++||..
T Consensus 541 ------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~- 595 (736)
T 3rfu_A 541 ------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK- 595 (736)
T ss_dssp ------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC-
T ss_pred ------------------------ECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE-
Confidence 5789999999999999999999999999999999999999999999999999852
Q ss_pred CceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHh
Q 002398 743 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (928)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~ 822 (928)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchh
Q 002398 823 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (928)
Q Consensus 823 ~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~l 900 (928)
++++++|++|..+|+.+++ .++.|+|+|||.||++||+.|||||+|+ +..+.++++||+++.+.+. +.++
T Consensus 596 ------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 596 ------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp ------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHH
T ss_pred ------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHH
Confidence 8999999999999999998 7889999999999999999999999994 4455599999999987555 7777
Q ss_pred hhcchhhhHHHhhhhheeeeecccccc
Q 002398 901 LLVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 901 ll~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+.+||..++++++++.|+|.+|+.+|
T Consensus 668 -i~~sr~t~~~i~qnl~~a~~yN~~~i 693 (736)
T 3rfu_A 668 -RRLSESTMSNIRQNLFFAFIYNVLGV 693 (736)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999998765
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-70 Score=654.33 Aligned_cols=482 Identities=20% Similarity=0.264 Sum_probs=391.7
Q ss_pred hhhhhhHHHHHHHHHHhhh------HHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceE
Q 002398 114 IGATMGKEVLEDWRRKKQD------IEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAIC 187 (928)
Q Consensus 114 l~~~~i~~~~~d~~r~k~~------~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~ 187 (928)
+++..+.+++|++.++|+. ..+.+++++|+ |||++++|++++|+|||+|.|++||.|||||+|++|+ +
T Consensus 103 ~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-----~ 176 (645)
T 3j08_A 103 LAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----S 176 (645)
T ss_dssp HHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc-----E
Confidence 3334556777888777653 23457899999 9999999999999999999999999999999999998 8
Q ss_pred EEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCe
Q 002398 188 YVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDC 267 (928)
Q Consensus 188 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~ 267 (928)
+||||+|||||.|+.|.+++.. |+||++.+ |+
T Consensus 177 ~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~---------------------g~ 208 (645)
T 3j08_A 177 YVDESMISGEPVPVLKSKGDEV---------------------------FGATINNT---------------------GV 208 (645)
T ss_dssp EEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECS---------------------SC
T ss_pred EEEcccccCCCCceecCCCCEe---------------------------eccEEEec---------------------Cc
Confidence 9999999999999999886543 44444443 56
Q ss_pred EEEEEEEecCCc---ceeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCCC
Q 002398 268 IYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDT 344 (928)
Q Consensus 268 ~~g~Vv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~~ 344 (928)
+.+.|++||.+| ++.+....++.+++++++.+++++.++++++++++++++++|.++... +|..
T Consensus 209 ~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~~----- 275 (645)
T 3j08_A 209 LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLLF----- 275 (645)
T ss_dssp EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC--------SCCC-----
T ss_pred EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHHH-----
Confidence 999999999999 556677788888999999999999999999999988887765433210 2221
Q ss_pred CCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEE
Q 002398 345 TAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTIL 424 (928)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~ 424 (928)
.+..++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++||
T Consensus 276 ---------------~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 330 (645)
T 3j08_A 276 ---------------AFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVI 330 (645)
T ss_dssp ---------------TTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEE
T ss_pred ---------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhCCCEEE
Confidence 45667888999999999999999999999888 78999999999999999999999
Q ss_pred ecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChHH
Q 002398 425 SDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADV 504 (928)
Q Consensus 425 ~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (928)
||||||||+|+|++.++...+..
T Consensus 331 fDKTGTLT~~~~~v~~~~~~~~~--------------------------------------------------------- 353 (645)
T 3j08_A 331 FDKTGTLTKGKPEVTDLVPLNGD--------------------------------------------------------- 353 (645)
T ss_dssp EEGGGTSSSSCCEEEEEEESSSC---------------------------------------------------------
T ss_pred EcCcccccCCCeEEEEEEeCCCC---------------------------------------------------------
Confidence 99999999999999999765311
Q ss_pred HHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeec
Q 002398 505 IQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLE 584 (928)
Q Consensus 505 ~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~ 584 (928)
.++++...+.|+. .++||++.|+++++++.|+.+.... .+.. ..|.+..
T Consensus 354 ~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~--~~~~-----~~g~g~~---------- 402 (645)
T 3j08_A 354 ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE--KVEV-----IAGEGVV---------- 402 (645)
T ss_dssp HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC--CCEE-----ETTTEEE----------
T ss_pred HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCcc--ceEE-----ecCCceE----------
Confidence 0133444444432 1469999999999999887542211 0000 0011100
Q ss_pred ccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHH
Q 002398 585 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFT 664 (928)
Q Consensus 585 F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~ 664 (928)
. ..+.+|+++.+.+ .+...++.+.+.++.++.+|+|++++|
T Consensus 403 -----------~-------~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~l~va----------------- 443 (645)
T 3j08_A 403 -----------A-------DGILVGNKRLMED----FGVAVSNEVELALEKLEREAKTAVIVA----------------- 443 (645)
T ss_dssp -----------E-------TTEEEECHHHHHH----TTCCCCHHHHHHHHHHHTTTCCCEEEE-----------------
T ss_pred -----------E-------EEEEECCHHHHHh----cCCCccHHHHHHHHHHHhcCCeEEEEE-----------------
Confidence 0 1244577765533 222344567788889999999999999
Q ss_pred HHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCc
Q 002398 665 EAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 744 (928)
Q Consensus 665 ~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 744 (928)
.|++++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 444 ----------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--- 498 (645)
T 3j08_A 444 ----------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--- 498 (645)
T ss_dssp ----------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---
T ss_pred ----------------------ECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE---
Confidence 5789999999999999999999999999999999999999999999999999842
Q ss_pred eEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhc
Q 002398 745 RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG 824 (928)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~ 824 (928)
T Consensus 499 -------------------------------------------------------------------------------- 498 (645)
T 3j08_A 499 -------------------------------------------------------------------------------- 498 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhh
Q 002398 825 CASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLL 902 (928)
Q Consensus 825 ~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll 902 (928)
++++++|++|..+++.+++ . +.|+|+|||.||++||+.||+||+|. +..+.++++||+++.+.++ +..+ +
T Consensus 499 ----~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~-i 570 (645)
T 3j08_A 499 ----VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA-I 570 (645)
T ss_dssp ----EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHH-H
T ss_pred ----EEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHH-H
Confidence 8999999999999999998 4 89999999999999999999999994 4445599999999976444 8887 8
Q ss_pred cchhhhHHHhhhhheeeeecccccc
Q 002398 903 VHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 903 ~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
.+||+.++++++++.|+|++|+..|
T Consensus 571 ~~~r~~~~~i~~nl~~a~~~N~~~i 595 (645)
T 3j08_A 571 QLSRKTMSKIKQNIFWALIYNVILI 595 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998754
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-70 Score=660.45 Aligned_cols=483 Identities=20% Similarity=0.264 Sum_probs=392.9
Q ss_pred HhhhhhhHHHHHHHHHHhhhH------HHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCce
Q 002398 113 VIGATMGKEVLEDWRRKKQDI------EVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAI 186 (928)
Q Consensus 113 vl~~~~i~~~~~d~~r~k~~~------~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~ 186 (928)
++++..+.+++|++.++|+.+ .+.+.+++|+ |||++++|++++|+|||+|.|++||.|||||+|++|+
T Consensus 180 i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~----- 253 (723)
T 3j09_A 180 LLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE----- 253 (723)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC-----
Confidence 334445667778888776533 3347899999 9999999999999999999999999999999999998
Q ss_pred EEEEecCCCCCCcceeecccccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCC
Q 002398 187 CYVETTNLDGETNLKLKQALDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTD 266 (928)
Q Consensus 187 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~ 266 (928)
++||||+|||||.|+.|.+++.+ |+||++.+ |
T Consensus 254 ~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~---------------------g 285 (723)
T 3j09_A 254 SYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNT---------------------G 285 (723)
T ss_dssp EEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECS---------------------S
T ss_pred eEEecccccCCCcceeecCCCee---------------------------ccceEEec---------------------C
Confidence 89999999999999999886543 44444443 5
Q ss_pred eEEEEEEEecCCc---ceeeccCCCCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCcccccccccCCC
Q 002398 267 CIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDD 343 (928)
Q Consensus 267 ~~~g~Vv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~w~~~~~~ 343 (928)
++.+.|++||.+| ++.+....++.+++++++.+++++.++++++++++++++++|.++... +|..
T Consensus 286 ~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~~---- 353 (723)
T 3j09_A 286 VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLLF---- 353 (723)
T ss_dssp CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TTCC----
T ss_pred cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHHH----
Confidence 6999999999999 556677788888999999999999999999999988887765433210 2221
Q ss_pred CCCccCcchhHHHHHHHHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEE
Q 002398 344 TTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTI 423 (928)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i 423 (928)
.+.+++.+++.+|||+|+++++++...+..++ +++++++|+++.+|.||++++|
T Consensus 354 ----------------~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i 407 (723)
T 3j09_A 354 ----------------AFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAV 407 (723)
T ss_dssp ----------------SHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEE
T ss_pred ----------------HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCEE
Confidence 57778899999999999999999999999888 7899999999999999999999
Q ss_pred EecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhhcCCCCCCCChH
Q 002398 424 LSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHAD 503 (928)
Q Consensus 424 ~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (928)
|||||||||+|+|++.++...+.. +
T Consensus 408 ~fDKTGTLT~g~~~v~~~~~~~~~------~------------------------------------------------- 432 (723)
T 3j09_A 408 IFDKTGTLTKGKPEVTDLVPLNGD------E------------------------------------------------- 432 (723)
T ss_dssp EEEHHHHTSCSCCEEEEEEESSSC------H-------------------------------------------------
T ss_pred EEcCCCccccCceEEEEEEeCCCC------H-------------------------------------------------
Confidence 999999999999999999765310 0
Q ss_pred HHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeee
Q 002398 504 VIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVL 583 (928)
Q Consensus 504 ~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~ 583 (928)
.+++...+.|.. .++||++.|++++++..|+.+.... .... ..|.|...
T Consensus 433 --~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~~--~~~~-----~~g~g~~~-------- 481 (723)
T 3j09_A 433 --RELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE--KVEV-----IAGEGVVA-------- 481 (723)
T ss_dssp --HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC--CCEE-----ETTTEEEE--------
T ss_pred --HHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCcc--ceEE-----ecCCceEE--------
Confidence 123344444322 1469999999999999887542211 0000 00111000
Q ss_pred cccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHH
Q 002398 584 EFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEF 663 (928)
Q Consensus 584 ~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~ 663 (928)
..+.+|+++.+.+. +...++.+.+.++.++.+|+|++++|
T Consensus 482 --------------------~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~va---------------- 521 (723)
T 3j09_A 482 --------------------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAKTAVIVA---------------- 521 (723)
T ss_dssp --------------------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEE----------------
T ss_pred --------------------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcCCeEEEEE----------------
Confidence 12445877655332 22334567788899999999999999
Q ss_pred HHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCC
Q 002398 664 TEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 743 (928)
Q Consensus 664 ~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~ 743 (928)
.|++++|+++++|++|++++++|++|+++||++||+|||+..+|..+|+++|+..
T Consensus 522 -----------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-- 576 (723)
T 3j09_A 522 -----------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-- 576 (723)
T ss_dssp -----------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--
T ss_pred -----------------------ECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE--
Confidence 6789999999999999999999999999999999999999999999999999842
Q ss_pred ceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhh
Q 002398 744 MRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 823 (928)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~ 823 (928)
T Consensus 577 -------------------------------------------------------------------------------- 576 (723)
T 3j09_A 577 -------------------------------------------------------------------------------- 576 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhh
Q 002398 824 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLL 901 (928)
Q Consensus 824 ~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~ll 901 (928)
++++++|+||..+|+.+++ . +.|+|+|||.||++||+.|||||+|+ +..+.++++||+++.+.++ +..+
T Consensus 577 -----~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~- 647 (723)
T 3j09_A 577 -----VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAA- 647 (723)
T ss_dssp -----EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHH-
T ss_pred -----EEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHH-
Confidence 8999999999999999998 4 89999999999999999999999994 4445599999999976444 8888
Q ss_pred hcchhhhHHHhhhhheeeeecccccc
Q 002398 902 LVHGHWCYRRISSMVCFTLKMLIDKL 927 (928)
Q Consensus 902 l~~gr~~~~~i~~~i~~~~~~n~~~i 927 (928)
+.+||+.|+++++++.|+|++|+..|
T Consensus 648 i~~~r~~~~~i~~nl~~a~~~n~~~i 673 (723)
T 3j09_A 648 IQLSRKTMSKIKQNIFWALIYNVILI 673 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999998754
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.8e-27 Score=249.31 Aligned_cols=139 Identities=22% Similarity=0.297 Sum_probs=119.4
Q ss_pred ccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHH
Q 002398 687 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKS 766 (928)
Q Consensus 687 ~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (928)
.+..+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..+++.+||..
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------- 177 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------- 177 (263)
Confidence 3456789999999999999999999999999999999999999999999988732
Q ss_pred HHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHh
Q 002398 767 AAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVK 846 (928)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~ 846 (928)
+|..+.|+.|..+++.++
T Consensus 178 --------------------------------------------------------------~f~~~~p~~k~~~~~~l~ 195 (263)
T 2yj3_A 178 --------------------------------------------------------------YYSNLSPEDKVRIIEKLK 195 (263)
Confidence 445555999999999988
Q ss_pred hcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceec--ccccccchhhhcchhhhHHHhhhh
Q 002398 847 TKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRISSM 915 (928)
Q Consensus 847 ~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi--~~f~~l~~lll~~gr~~~~~i~~~ 915 (928)
. .+..|+|||||.||++|++.||+||++. .....+...||+++ .++..|..+ +..+|..+++++.+
T Consensus 196 ~-~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 196 Q-NGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPSN 263 (263)
Confidence 7 6778999999999999999999999994 33344778899999 566668877 88999999998753
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=215.01 Aligned_cols=272 Identities=24% Similarity=0.287 Sum_probs=193.7
Q ss_pred cCCCccccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhcccccc
Q 002398 402 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 481 (928)
Q Consensus 402 ~~~~i~~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (928)
+++|+++|+++.+|.|++++.|+||||||||.+.+.+..+...+. ..
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------CH---------------------------
Confidence 789999999999999999999999999999999999988765432 00
Q ss_pred CCCccCchhhhcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeE
Q 002398 482 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 561 (928)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~ 561 (928)
.+++.. |.++. . .+.||.+.|+.++++..|+.... ...+.
T Consensus 61 ------------------------~~~l~~---~~~~e--~---------~s~hp~~~a~~~~~~~~g~~~~~--~~~~~ 100 (287)
T 3a1c_A 61 ------------------------RELLRL---AAIAE--R---------RSEHPIAEAIVKKALEHGIELGE--PEKVE 100 (287)
T ss_dssp ------------------------HHHHHH---HHHHT--T---------TCCSHHHHHHHHHHHHTTCCCCC--CSCEE
T ss_pred ------------------------HHHHHH---HHHHh--h---------cCCCHHHHHHHHHHHhcCCCccc--cccce
Confidence 012221 22221 1 14699999999999998875311 00000
Q ss_pred EEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccC
Q 002398 562 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 641 (928)
Q Consensus 562 v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Gl 641 (928)
...+ .+ +. . ..+.+|.++.+.+. +...++.+...++.+..+|.
T Consensus 101 -~~~G----~~---------------------~~--~-----~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g~ 143 (287)
T 3a1c_A 101 -VIAG----EG---------------------VV--A-----DGILVGNKRLMEDF----GVAVSNEVELALEKLEREAK 143 (287)
T ss_dssp -EETT----TE---------------------EE--E-----TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHHTTC
T ss_pred -eecC----CC---------------------eE--E-----EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhCCC
Confidence 0000 00 00 0 11334554333211 11111234556677888999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEE
Q 002398 642 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 721 (928)
Q Consensus 642 r~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~m 721 (928)
++++++ .|..+++.+..+++++|++.++|+.|+++|++++|
T Consensus 144 ~~i~~~---------------------------------------~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 184 (287)
T 3a1c_A 144 TAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGM 184 (287)
T ss_dssp EEEEEE---------------------------------------ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEE
Confidence 999998 46688999999999999999999999999999999
Q ss_pred EcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEE
Q 002398 722 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 801 (928)
Q Consensus 722 lTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 801 (928)
+||++...+..+++.+|+..
T Consensus 185 ~T~~~~~~~~~~l~~~gl~~------------------------------------------------------------ 204 (287)
T 3a1c_A 185 ITGDNWRSAEAISRELNLDL------------------------------------------------------------ 204 (287)
T ss_dssp ECSSCHHHHHHHHHHHTCSE------------------------------------------------------------
T ss_pred EeCCCHHHHHHHHHHhCCce------------------------------------------------------------
Confidence 99999999999999988732
Q ss_pred echhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchh
Q 002398 802 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 881 (928)
Q Consensus 802 ~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~ 881 (928)
+|..+.|..|..+++.+.. . ..++||||+.||+.|.+.|+++|++... ..
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~-~~ 254 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSG-SD 254 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCC-SC
T ss_pred ---------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCC-CH
Confidence 4555668899999999987 5 8899999999999999999999999432 22
Q ss_pred hHhHhcceec--ccccccchhhhcchhhhHHHhh
Q 002398 882 QAVMSSDIAI--AQFRFLERLLLVHGHWCYRRIS 913 (928)
Q Consensus 882 ~a~~~aD~vi--~~f~~l~~lll~~gr~~~~~i~ 913 (928)
..+..||+++ .++..+..+ +..+|..+++|+
T Consensus 255 ~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 255 VAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 3566799999 666667777 789999988874
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-21 Score=205.64 Aligned_cols=274 Identities=24% Similarity=0.295 Sum_probs=185.2
Q ss_pred ccccchhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccC
Q 002398 408 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFE 487 (928)
Q Consensus 408 ~~~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (928)
+|+++.+|.|++++.|+||++||||.|.|.+..+...+. ..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----~~----------------------------------- 41 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----SE----------------------------------- 41 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----CH-----------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----CH-----------------------------------
Confidence 478899999999999999999999999999998865432 00
Q ss_pred chhhhcCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCC
Q 002398 488 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 567 (928)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~ 567 (928)
.+++..++.+.. .+.+|...++.++++..|+.....
T Consensus 42 ------------------~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~~------------ 77 (280)
T 3skx_A 42 ------------------DELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTEV------------ 77 (280)
T ss_dssp ------------------HHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCCC------------
T ss_pred ------------------HHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCCc------------
Confidence 122222222211 135788899999999887643210
Q ss_pred CCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEE
Q 002398 568 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 647 (928)
Q Consensus 568 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A 647 (928)
..+. .++ .+.+...+ ++..+ ..|.++.+........ ..+..+...+.+.+.++
T Consensus 78 -------~~~~---~~~----g~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 130 (280)
T 3skx_A 78 -------EEFR---AIP----GKGVEGIV---NGRRY--MVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFIL 130 (280)
T ss_dssp -------EEEE---EET----TTEEEEEE---TTEEE--EEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEE
T ss_pred -------ccee---ecC----CCEEEEEE---CCEEE--EEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEE
Confidence 0000 000 01111111 22222 2355544433221111 23446677888888777
Q ss_pred EEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002398 648 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (928)
Q Consensus 648 ~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~ 727 (928)
.+..++|.+.+.+++++++.++++.|++.|+++.|+||++.
T Consensus 131 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~ 171 (280)
T 3skx_A 131 ---------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNR 171 (280)
T ss_dssp ---------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred ---------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCH
Confidence 56688999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhH
Q 002398 728 ETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 807 (928)
Q Consensus 728 ~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 807 (928)
..+..+++.+|+..
T Consensus 172 ~~~~~~~~~~gl~~------------------------------------------------------------------ 185 (280)
T 3skx_A 172 FVAKWVAEELGLDD------------------------------------------------------------------ 185 (280)
T ss_dssp HHHHHHHHHHTCSE------------------------------------------------------------------
T ss_pred HHHHHHHHHcCChh------------------------------------------------------------------
Confidence 99999999998742
Q ss_pred HHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhc
Q 002398 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 887 (928)
Q Consensus 808 ~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~a 887 (928)
.|..+.|.+|...++.+.+ .. .++||||+.||++|++.|++||+|.+ ....++..|
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~~-~~~~vGD~~nDi~~~~~Ag~~va~~~-~~~~~~~~a 241 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-KY-VTAMVGDGVNDAPALAQADVGIAIGA-GTDVAVETA 241 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-TS-CEEEEECTTTTHHHHHHSSEEEECSC-CSSSCCCSS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-cC-CEEEEeCCchhHHHHHhCCceEEecC-CcHHHHhhC
Confidence 5666778899999998876 33 67999999999999999999999954 333477889
Q ss_pred ceecc--cccccchhhhcchhhhHHHhhhhheeeee
Q 002398 888 DIAIA--QFRFLERLLLVHGHWCYRRISSMVCFTLK 921 (928)
Q Consensus 888 D~vi~--~f~~l~~lll~~gr~~~~~i~~~i~~~~~ 921 (928)
|+++. +..-+..+ +..+|..+++++.++.|+|.
T Consensus 242 ~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 242 DIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 99984 45557777 78899999999999998874
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-21 Score=174.37 Aligned_cols=98 Identities=20% Similarity=0.256 Sum_probs=88.2
Q ss_pred hhHHHhcceEEEEeCCCeEEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeeccccccc
Q 002398 131 QDIEVNNRKVKVHCGEGAFDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATS 210 (928)
Q Consensus 131 ~~~~~n~~~~~v~~r~g~~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~ 210 (928)
+...+.+..++|+ |+|++++|++++|+|||+|.|++||.|||||+|++|+ ++||||+|||||.|+.|.+++..
T Consensus 5 ~L~~l~p~~a~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-----~~vdeS~LTGEs~pv~k~~g~~v- 77 (113)
T 2hc8_A 5 KLVGLQAKTAVVI-RDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----SYVDESMISGEPVPVLKSKGDEV- 77 (113)
T ss_dssp HHHHHSCSEEEEE-ETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----EEEECHHHHCCSSCEEECTTCEE-
T ss_pred HHhcCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-----EEEEccccCCCCccEEECCCCEE-
Confidence 4567778999999 9999999999999999999999999999999999998 89999999999999999987644
Q ss_pred CCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCccee
Q 002398 211 NMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF 282 (928)
Q Consensus 211 ~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~ 282 (928)
|+||++.+|. +.++|++||.+|.+.
T Consensus 78 --------------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~~ 102 (113)
T 2hc8_A 78 --------------------------FGATINNTGV---------------------LKIRATRVGGETLLA 102 (113)
T ss_dssp --------------------------CTTCEECSSC---------------------EEEEEEECGGGSHHH
T ss_pred --------------------------EeCCEEeece---------------------EEEEEEEecCcCHHH
Confidence 7777777665 999999999999653
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-19 Score=165.68 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=84.8
Q ss_pred hHHHhcceEEEEeCCCe------EEEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecc
Q 002398 132 DIEVNNRKVKVHCGEGA------FDYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQA 205 (928)
Q Consensus 132 ~~~~n~~~~~v~~r~g~------~~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~ 205 (928)
...+.+..++|+ |+|. ++.|+.++|+|||+|.|++||.|||||+|++++ +.||||+|||||.|+.|.+
T Consensus 12 L~~l~p~~a~v~-r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-----~~vdeS~LTGEs~pv~k~~ 85 (124)
T 2kij_A 12 LISLQATEATIV-TLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-----SMVDESLITGEAMPVAKKP 85 (124)
T ss_dssp HHHTCCSEEEEE-ECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-----CEEECTTTTCCSSCEECCT
T ss_pred HhccCCCEEEEE-ECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-----EEEEeccccCCCccEEeCC
Confidence 455668999999 8653 789999999999999999999999999999998 6899999999999999998
Q ss_pred cccccCCCCccccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCccee
Q 002398 206 LDATSNMHEDSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF 282 (928)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~ 282 (928)
++.. |+||++.+|. +.+.|++||.+|.+.
T Consensus 86 g~~v---------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~~ 114 (124)
T 2kij_A 86 GSTV---------------------------IAGSINQNGS---------------------LLICATHVGADTTLS 114 (124)
T ss_dssp TEEE---------------------------CTTCEEESSC---------------------CEEEECSCTTTCHHH
T ss_pred CCEE---------------------------EcCCEEeeeE---------------------EEEEEEEecccCHHH
Confidence 7644 7777777665 899999999999653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.2e-19 Score=171.91 Aligned_cols=124 Identities=22% Similarity=0.263 Sum_probs=99.6
Q ss_pred cCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHH
Q 002398 534 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSV 613 (928)
Q Consensus 534 ~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~ 613 (928)
++|.|.|+++++...++. .....|+++..+||+|+||||||+++.++|..++|+|||||.
T Consensus 33 ~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~ 92 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQE 92 (170)
T ss_dssp CCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHH
T ss_pred CChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHH
Confidence 599999999986542210 012568899999999999999999998888999999999999
Q ss_pred HHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHH
Q 002398 614 MFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEK 684 (928)
Q Consensus 614 i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ 684 (928)
|+++|+.. ++..++.+.+.++.|+.+|+|||++|||.++..+.. ....
T Consensus 93 IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~-----------------------~~~~ 149 (170)
T 3gwi_A 93 ILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD-----------------------YQRA 149 (170)
T ss_dssp HHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC-----------------------CCGG
T ss_pred HHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc-----------------------cCcc
Confidence 99999742 345677889999999999999999999998753210 0123
Q ss_pred HhccceEeeeeecccc
Q 002398 685 IEKNLILLGATAVEDK 700 (928)
Q Consensus 685 ie~dl~llG~~~i~D~ 700 (928)
.|+||+|+|++||-|.
T Consensus 150 ~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 150 DESDLILEGYIAFLDH 165 (170)
T ss_dssp GSCSEEEEEEEEEEC-
T ss_pred ccCCcEEEehhccccc
Confidence 5899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.70 E-value=9.6e-18 Score=182.11 Aligned_cols=143 Identities=14% Similarity=0.103 Sum_probs=104.3
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhh
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (928)
..+++||+++++++.|+++|+++.|+|||...++.++|+++|+...+..+........+
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~--------------------- 196 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE--------------------- 196 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECT---------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcc---------------------
Confidence 45899999999999999999999999999999999999999997665444321111000
Q ss_pred HHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEE
Q 002398 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~i 856 (928)
......+.+... .++++..|.+|...+..+++ .++.|+|+
T Consensus 197 ------------------~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~-~~~~v~~v 236 (297)
T 4fe3_A 197 ------------------NGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLK-DNSNIILL 236 (297)
T ss_dssp ------------------TSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTT-TCCEEEEE
T ss_pred ------------------cceeEecccccc---------------------chhhcccHHHHHHHHHHhhc-cCCEEEEE
Confidence 000111111111 14556667788877777776 68899999
Q ss_pred cCCccCHHHHH---hCceeEEEcC------cchhhHhHhcceecccccc--cchh
Q 002398 857 GDGANDVGMLQ---EADIGVGISG------VEGMQAVMSSDIAIAQFRF--LERL 900 (928)
Q Consensus 857 GDG~ND~~ml~---~AdvGIa~~g------~~~~~a~~~aD~vi~~f~~--l~~l 900 (928)
|||.||++|++ .||+||+|+- ...+.++++||+||.++++ +++.
T Consensus 237 GDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 237 GDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp ESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred eCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 99999999955 9999999841 3344579999999999877 4444
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.9e-11 Score=122.82 Aligned_cols=138 Identities=11% Similarity=0.073 Sum_probs=105.3
Q ss_pred eEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHH
Q 002398 690 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 769 (928)
Q Consensus 690 ~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (928)
..++.+.++|.+ +|+.|++.|+++.|+||++...+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 344445555443 9999999999999999999999999999999842
Q ss_pred HHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC
Q 002398 770 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 849 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~ 849 (928)
+|... ..|...++.+.+..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 12111 56777666665533
Q ss_pred ---CCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc------cccchhhhcchhhhHHHhhhhheeee
Q 002398 850 ---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF------RFLERLLLVHGHWCYRRISSMVCFTL 920 (928)
Q Consensus 850 ---~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f------~~l~~lll~~gr~~~~~i~~~i~~~~ 920 (928)
...+++|||+.||++|++.|++|+++.+ ....++..||+++.+. +.+.++ +...|..+.++++++.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~-~~~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVAN-AASFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTT-SCHHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCC-ccHHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 3689999999999999999999999954 3344788999999873 446666 5678899999999999999
Q ss_pred eccc
Q 002398 921 KMLI 924 (928)
Q Consensus 921 ~~n~ 924 (928)
.+|.
T Consensus 185 ~~~~ 188 (189)
T 3mn1_A 185 HHHH 188 (189)
T ss_dssp ----
T ss_pred cccC
Confidence 8874
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.15 E-value=6.1e-11 Score=127.02 Aligned_cols=205 Identities=17% Similarity=0.149 Sum_probs=111.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCC---------CccccccchhhHHHHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET---------PESKTLEKSEDKSAAA 769 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 769 (928)
..+-+.+.++|++|++.|++++++||++...+..+...+++.....+.+..+|.. .....+..+...+.+.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 3577899999999999999999999999999999999998743333333333321 1111222333333333
Q ss_pred HHHHHhhHHHhhhhhh--------------------------hcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhh
Q 002398 770 AALKASVLHQLIRGKE--------------------------LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 823 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~ 823 (928)
..........+..... .+...........++.+.......+.+.+.+.+. .
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~---~ 177 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQ---G 177 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTT---T
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhc---C
Confidence 2222111100000000 0000000111122233222111111112222211 1
Q ss_pred cCCeEE----EEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 824 GCASVI----CCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 824 ~~~~~v----~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
....+. +....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|. +....++.+||+++.+.
T Consensus 178 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~ 256 (279)
T 4dw8_A 178 KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTN 256 (279)
T ss_dssp TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCG
T ss_pred CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCC
Confidence 111111 2244554 79988888776544 57999999999999999999999994 44455899999999763
Q ss_pred cc------cchhhhcchhh
Q 002398 895 RF------LERLLLVHGHW 907 (928)
Q Consensus 895 ~~------l~~lll~~gr~ 907 (928)
.. |.+++..+|+.
T Consensus 257 ~e~Gv~~~i~~~~~~~~~~ 275 (279)
T 4dw8_A 257 DEDGVAEAIERIFNVEGHH 275 (279)
T ss_dssp GGTHHHHHHHHHC------
T ss_pred CCcHHHHHHHHHHhccccc
Confidence 32 56666666654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.9e-10 Score=123.17 Aligned_cols=207 Identities=13% Similarity=0.133 Sum_probs=100.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCC--------CccccccchhhHHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET--------PESKTLEKSEDKSAAAAA 771 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 771 (928)
.+-+.+.++|++|++.|++++++||++...+..+...+|+..+....+..+|.. .....+......+.+...
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 477889999999999999999999999999999999998754333444434331 111112222222222222
Q ss_pred HHHhhHHHhhhhh-------------------h-------hcccCC-CCCCCeEEEEechhhHHHhHHHHHHHHHH-Hhh
Q 002398 772 LKASVLHQLIRGK-------------------E-------LLDSSN-ESLGPLALIIDGKSLTYALEDDVKDLFLE-LAI 823 (928)
Q Consensus 772 ~~~~~~~~~~~~~-------------------~-------~~~~~~-~~~~~~~lvi~g~~l~~~l~~~~~~~~~~-~~~ 823 (928)
........+.... . .+.... .......++.........+.+.+.+.+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 2111000000000 0 000000 11111222222111111111112122221 111
Q ss_pred cCCeEEEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--
Q 002398 824 GCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF-- 896 (928)
Q Consensus 824 ~~~~~v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~-- 896 (928)
......+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+ ....++..||+++.+...
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~n-a~~~~k~~A~~v~~~~~e~G 260 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGN-AIDEVKEAAQAVTLTNAENG 260 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------C
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccC-CCHHHHHhcceeccCCCccH
Confidence 0011112334443 59988888877655 579999999999999999999999944 444589999999876332
Q ss_pred ----cchhhhcchhh
Q 002398 897 ----LERLLLVHGHW 907 (928)
Q Consensus 897 ----l~~lll~~gr~ 907 (928)
|.++++-+|+.
T Consensus 261 v~~~i~~~~~~~~~~ 275 (279)
T 3mpo_A 261 VAAAIRKYALNEGHH 275 (279)
T ss_dssp HHHHHC---------
T ss_pred HHHHHHHHhcccCcc
Confidence 55665666653
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=3.2e-10 Score=122.16 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=55.3
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc------cchhhhcchh
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF------LERLLLVHGH 906 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~------l~~lll~~gr 906 (928)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|. +....++..||+++.+... |.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 469988888876655 57999999999999999999999994 4445589999999976333 5555555555
Q ss_pred hhHHH
Q 002398 907 WCYRR 911 (928)
Q Consensus 907 ~~~~~ 911 (928)
+-|.+
T Consensus 280 ~~~~~ 284 (290)
T 3dnp_A 280 KGFLD 284 (290)
T ss_dssp C----
T ss_pred ccHHh
Confidence 55543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.97 E-value=4.2e-09 Score=112.95 Aligned_cols=191 Identities=14% Similarity=0.136 Sum_probs=105.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc----ccCCceEEEEeCCCCccccccchhhHHHHHHHHHH-
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA- 774 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 774 (928)
.+-+.+.++|++|++.|++++++||++...+..+...+++ +..++..+..++.......+..+...+.+......
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999887764 22233332222221112222222222222222211
Q ss_pred -hh-------------------HHHhhhh-h------hhcccCCCCCCCeEEEE-echhhHHHhHHHHHHHHHHHhhcCC
Q 002398 775 -SV-------------------LHQLIRG-K------ELLDSSNESLGPLALII-DGKSLTYALEDDVKDLFLELAIGCA 826 (928)
Q Consensus 775 -~~-------------------~~~~~~~-~------~~~~~~~~~~~~~~lvi-~g~~l~~~l~~~~~~~~~~~~~~~~ 826 (928)
.. ....... . ..+............++ +....... .+.+.+.+.. ...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~-~~~l~~~~~~---~~~ 194 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELC-TPVFIPAWNK---KAH 194 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHH-TTTHHHHHTT---TEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHH-HHHHHHHhcC---CEE
Confidence 00 0000000 0 00000000111222333 23322221 1223333321 011
Q ss_pred eE----EEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 827 SV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 827 ~~----v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
.+ .+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+ ....++..||++..+..
T Consensus 195 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~n-a~~~~k~~A~~v~~s~~ 271 (283)
T 3dao_A 195 LAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSN-ARQEVIAAAKHTCAPYW 271 (283)
T ss_dssp EEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETT-SCHHHHHHSSEEECCGG
T ss_pred EEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCC-CCHHHHHhcCeECCCCC
Confidence 10 12233443 69998888877655 579999999999999999999999954 44558999999987633
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.93 E-value=8.7e-10 Score=114.05 Aligned_cols=178 Identities=14% Similarity=0.050 Sum_probs=98.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCc---cccc-cch--hhHHHHHHH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE---SKTL-EKS--EDKSAAAAA 771 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~---~~~~-~~~--~~~~~~~~~ 771 (928)
...+.+++.++|++|++.|++++++|||+...+..+++++++.. +.+..+|.... ...+ ... +....+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i-~~ 95 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFL-EE 95 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHH-HH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccHHHHHHH-HH
Confidence 45688899999999999999999999999999999999988632 22222222110 0001 000 111111 11
Q ss_pred HHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEE-----EEecCc--ccHHHHHHH
Q 002398 772 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQKALVTRL 844 (928)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v-----~~r~sp--~qK~~iV~~ 844 (928)
..+ .......+.. ......+.. + +. ....+..+.+.... ...+ +..+.| ..|+..++.
T Consensus 96 ~~~-----~~~~~~~~~~-~~~~~~~~~-~----~~-~~~~~~~~~~~~~~---~~~~~~~~~~~ei~~~~~~K~~~l~~ 160 (227)
T 1l6r_A 96 MSK-----RTSMRSILTN-RWREASTGF-D----ID-PEDVDYVRKEAESR---GFVIFYSGYSWHLMNRGEDKAFAVNK 160 (227)
T ss_dssp HTT-----TSSCBCCGGG-GGCSSSEEE-B----CC-GGGHHHHHHHHHTT---TEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred HHH-----HhcCCccccc-cceecccce-E----Ee-cCCHHHHHHHHHhc---CEEEEecCcEEEEecCCCCHHHHHHH
Confidence 111 0000000000 000001100 0 00 00111111111110 1112 123445 589998888
Q ss_pred HhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 845 VKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 845 l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
+.+..+ ..+++|||+.||++|++.|++||+|.+. ...++..||+++.+..
T Consensus 161 l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~-~~~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 161 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA-TDNIKAVSDFVSDYSY 213 (227)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTS-CHHHHHHCSEECSCCT
T ss_pred HHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCc-hHHHHHhCCEEecCCC
Confidence 876544 5799999999999999999999999543 3457889999987643
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.2e-09 Score=109.93 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=86.5
Q ss_pred ccceEeeeeeccccCCCChHHH-------HHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccc
Q 002398 687 KNLILLGATAVEDKLQNGVPEC-------IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 759 (928)
Q Consensus 687 ~dl~llG~~~i~D~lr~~~~~~-------I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 759 (928)
.|.+++.-....++..+++.+. |+.|+++|++++|+||++...+..+++++|+..
T Consensus 32 ~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------ 93 (195)
T 3n07_A 32 VDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------ 93 (195)
T ss_dssp STTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------
T ss_pred CCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------
Confidence 4555554222233334455555 999999999999999999999999999999842
Q ss_pred cchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHH
Q 002398 760 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKA 839 (928)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~ 839 (928)
+|... +.|.
T Consensus 94 ---------------------------------------------------------------------~~~~~--k~k~ 102 (195)
T 3n07_A 94 ---------------------------------------------------------------------IYQGQ--DDKV 102 (195)
T ss_dssp ---------------------------------------------------------------------EECSC--SSHH
T ss_pred ---------------------------------------------------------------------EeeCC--CCcH
Confidence 22212 4566
Q ss_pred HHHHHHhhcC---CCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 840 LVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 840 ~iV~~l~~~~---~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
..++.+.+.. ...+++|||+.||++|++.|+++++|.+. ...++..||+++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na-~~~~~~~ad~v~~~~ 159 (195)
T 3n07_A 103 QAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADG-HPLLAQRANYVTHIK 159 (195)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTS-CHHHHHHCSEECSSC
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECCh-HHHHHHhCCEEEcCC
Confidence 6665554432 36799999999999999999999999543 344889999999863
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.4e-09 Score=108.15 Aligned_cols=131 Identities=11% Similarity=0.061 Sum_probs=96.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHh
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (928)
+.+++.++|+.|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999998842
Q ss_pred hhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeEEEEc
Q 002398 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIG 857 (928)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~vl~iG 857 (928)
++.. ...|...++.+.+..+ ..+++||
T Consensus 77 ------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 ------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 2446666655543333 6899999
Q ss_pred CCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc------cchhhhcchhhhHHHhhhhheeeeec
Q 002398 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF------LERLLLVHGHWCYRRISSMVCFTLKM 922 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~------l~~lll~~gr~~~~~i~~~i~~~~~~ 922 (928)
|+.||++|++.|++++++.+. ...++..||+++.+... +.+. +...|..+.+++..+.|.+.-
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~-~~~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADA-PIYVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLKSV 175 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTS-CHHHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHHHG
T ss_pred CCHHHHHHHHHcCCeEEeCCc-cHHHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhhhh
Confidence 999999999999999999543 33477899999987532 2333 334566688888777776554
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.7e-09 Score=119.04 Aligned_cols=150 Identities=20% Similarity=0.174 Sum_probs=96.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|+++|+++.|+||+....+..+++.+|+...-...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999985321111111110
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEe-cCcccHHHHHHHHhhc---CCCeEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTK---TSSTTLA 855 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r-~sp~qK~~iV~~l~~~---~~~~vl~ 855 (928)
.++|. +... ..++.|...++.+.+. ....|+|
T Consensus 231 --------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~ 266 (335)
T 3n28_A 231 --------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVA 266 (335)
T ss_dssp --------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhEEE
Confidence 00000 0000 1233466555554433 3368999
Q ss_pred EcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHHhhhhheeeeecc
Q 002398 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMVCFTLKML 923 (928)
Q Consensus 856 iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~i~~~i~~~~~~n 923 (928)
||||.||++|++.|++||+|.+.+ ..+..||+++...+. +..+ +........|++.++.+.+.+|
T Consensus 267 vGDs~nDi~~a~~aG~~va~~~~~--~~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 267 VGDGANDLVMMAAAGLGVAYHAKP--KVEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCH--HHHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCH--HHHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 999999999999999999994433 378899999854333 4444 3444445568888898888876
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.3e-09 Score=104.71 Aligned_cols=107 Identities=11% Similarity=0.030 Sum_probs=82.5
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHH--HcCcccCCceEEEEeCCCCccccccchhhH
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKSEDK 765 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (928)
+...++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 4456677777777 4899999999999999999 67778887 44541
Q ss_pred HHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHH
Q 002398 766 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLV 845 (928)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l 845 (928)
++ ..+.+|...++.+
T Consensus 77 ---------------------------------------------------------------~~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 77 ---------------------------------------------------------------TE--VSVSDKLATVDEW 91 (168)
T ss_dssp ---------------------------------------------------------------EE--CSCSCHHHHHHHH
T ss_pred ---------------------------------------------------------------EE--ECCCChHHHHHHH
Confidence 11 1235688777766
Q ss_pred hhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 846 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 846 ~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
.+..+ ..+++|||+.||++|++.|+++++|.+ ....++..||+++..
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~n-a~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPAD-ACSGAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTT-CCHHHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCC-hhHHHHHhCCEEeCC
Confidence 65443 689999999999999999999999944 345589999999985
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.90 E-value=8.7e-10 Score=119.67 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=49.1
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|. +....++..||+++.+..
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSND 288 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCC
Confidence 479988888876555 57999999999999999999999994 444558999999987633
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.90 E-value=7.1e-09 Score=109.49 Aligned_cols=185 Identities=16% Similarity=0.154 Sum_probs=101.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc---cCCceEEEEeCCCCccccccchhhHHHHHHHHHHh
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL---RQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 775 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (928)
..+.+.+.++|++|++.|++++++|||+...+..+..++++. ..++..+...+.......+..+...+.++......
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 457788999999999999999999999999999998888752 22222222222111112222222233332222111
Q ss_pred hHHHhhhhhh----------------hcc--c--CCC----CCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEE
Q 002398 776 VLHQLIRGKE----------------LLD--S--SNE----SLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC 831 (928)
Q Consensus 776 ~~~~~~~~~~----------------~~~--~--~~~----~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~ 831 (928)
....+..... ... . ... ....+.+++.+..-. . ..+.+.+. . .-+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--~-~~~~~~~~------~-~~~~ 168 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEE--E-EPYVRNYP------E-FRFV 168 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHH--H-HHHHHHCT------T-EEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHH--H-HHHHHhCC------C-eEEE
Confidence 1000000000 000 0 000 011222333333210 0 01111111 1 1112
Q ss_pred e-------cCc--ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 832 R-------SSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 832 r-------~sp--~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
+ +.| -.|+..++.+.++.| ..|++|||+.||++|++.|++||+|. +....++..||+++.+.
T Consensus 169 ~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 169 RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPV 242 (258)
T ss_dssp EEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCG
T ss_pred EeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCC
Confidence 2 222 269988888776533 57999999999999999999999994 45556899999998753
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.86 E-value=5.8e-09 Score=111.07 Aligned_cols=59 Identities=19% Similarity=0.267 Sum_probs=48.2
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
..|+..++.+.++.| ..+++|||+.||++|++.|++||+|. +....++..||+++.+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCc
Confidence 369988887766533 67999999999999999999999994 444558999999997643
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.85 E-value=4.8e-09 Score=112.45 Aligned_cols=195 Identities=12% Similarity=0.097 Sum_probs=103.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCC---------CccccccchhhHHHHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET---------PESKTLEKSEDKSAAA 769 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 769 (928)
..+-+.+.++|++|+++|++++++|||+...+..+.+++++.......+..+|.. .....+..+...+.+.
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 100 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 100 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 3477889999999999999999999999999999999998643222333333321 1111222222222222
Q ss_pred HHHHHhhHHHhhhhhh-------------------hcc-------cC-CCCCCCeEEEEechhhHHHhHHHHHHHHHH-H
Q 002398 770 AALKASVLHQLIRGKE-------------------LLD-------SS-NESLGPLALIIDGKSLTYALEDDVKDLFLE-L 821 (928)
Q Consensus 770 ~~~~~~~~~~~~~~~~-------------------~~~-------~~-~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~-~ 821 (928)
..........+..... .+. .. ........+++........+.+.+.+.+.. +
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 180 (282)
T 1rkq_A 101 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 180 (282)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCE
Confidence 2211111000000000 000 00 000111122222111111111111112211 1
Q ss_pred hhcCCeEEEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 822 AIGCASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 822 ~~~~~~~v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
.......-+..+.|. .|+..++.+.+..+ ..+++|||+.||++|++.|++||+|.+. ....+..||+++.+.
T Consensus 181 ~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~-~~~~~~~a~~v~~~~ 257 (282)
T 1rkq_A 181 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSN 257 (282)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECCCT
T ss_pred EEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCC-cHHHHhhCCEEecCC
Confidence 000000012344554 79988888866433 5799999999999999999999999543 344778899998763
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.9e-09 Score=102.68 Aligned_cols=115 Identities=13% Similarity=0.142 Sum_probs=86.2
Q ss_pred EeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHH
Q 002398 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 770 (928)
Q Consensus 691 llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (928)
.+..+.+.|.+ +|+.|+++|+++.++||++...+..+++.+|+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34444455444 899999999999999999999999999999873
Q ss_pred HHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC-
Q 002398 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT- 849 (928)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~- 849 (928)
++.. ...|...++.+.+..
T Consensus 80 ----------------------------------------------------------~~~~--~~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 80 ----------------------------------------------------------VLHG--IDRKDLALKQWCEEQG 99 (176)
T ss_dssp ----------------------------------------------------------EEES--CSCHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------eEeC--CCChHHHHHHHHHHcC
Confidence 1111 145776666555433
Q ss_pred --CCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc------ccccchhhh
Q 002398 850 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLL 902 (928)
Q Consensus 850 --~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~------f~~l~~lll 902 (928)
...+++|||+.||++|++.|++|+++.+. ...++..||+++.+ .+.+.++|+
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~-~~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVASA-HDVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECTTC-CHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECCCh-hHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 36799999999999999999999999543 33478899999987 444555543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.5e-09 Score=113.67 Aligned_cols=53 Identities=25% Similarity=0.190 Sum_probs=44.7
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcce
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 889 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~ 889 (928)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|. +....+|.+||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCC
Confidence 469998888877655 57999999999999999999999994 444558999995
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.82 E-value=4.2e-09 Score=105.70 Aligned_cols=142 Identities=15% Similarity=0.094 Sum_probs=96.0
Q ss_pred ccceEeeeeeccccCCCChHHH-------HHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccc
Q 002398 687 KNLILLGATAVEDKLQNGVPEC-------IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 759 (928)
Q Consensus 687 ~dl~llG~~~i~D~lr~~~~~~-------I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 759 (928)
.|.++..-....++..+++.+. |+.|+++|+++.++||++...+..+++.+|+..
T Consensus 26 ~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------ 87 (191)
T 3n1u_A 26 VDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------ 87 (191)
T ss_dssp STTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------
T ss_pred CCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------
Confidence 3445443222233334555555 999999999999999999999999999999852
Q ss_pred cchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcc--c
Q 002398 760 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK--Q 837 (928)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~--q 837 (928)
++....|+ -
T Consensus 88 ---------------------------------------------------------------------~~~~~kpk~~~ 98 (191)
T 3n1u_A 88 ---------------------------------------------------------------------YYKGQVDKRSA 98 (191)
T ss_dssp ---------------------------------------------------------------------EECSCSSCHHH
T ss_pred ---------------------------------------------------------------------ceeCCCChHHH
Confidence 11112221 1
Q ss_pred HHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc------cccchhhhcchhhhHHH
Q 002398 838 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF------RFLERLLLVHGHWCYRR 911 (928)
Q Consensus 838 K~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f------~~l~~lll~~gr~~~~~ 911 (928)
...+++.+.- ....++||||+.||++|++.|++++++.+. ...++..||+++.+. +.+..+ +...|..+..
T Consensus 99 ~~~~~~~~~~-~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~-~~~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~ 175 (191)
T 3n1u_A 99 YQHLKKTLGL-NDDEFAYIGDDLPDLPLIQQVGLGVAVSNA-VPQVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAEL 175 (191)
T ss_dssp HHHHHHHHTC-CGGGEEEEECSGGGHHHHHHSSEEEECTTC-CHHHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHH
T ss_pred HHHHHHHhCC-CHHHEEEECCCHHHHHHHHHCCCEEEeCCc-cHHHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHH
Confidence 2233333332 346899999999999999999999999543 344888999999873 235555 4556666666
Q ss_pred hhhhhee
Q 002398 912 ISSMVCF 918 (928)
Q Consensus 912 i~~~i~~ 918 (928)
+...+.|
T Consensus 176 ~~~~~~~ 182 (191)
T 3n1u_A 176 AITGYLK 182 (191)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 6555443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.80 E-value=7.4e-09 Score=105.41 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=84.5
Q ss_pred EeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHH
Q 002398 691 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 770 (928)
Q Consensus 691 llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (928)
.+..+.+.|.+ +|+.|+++|+++.|+||++...+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34445555554 9999999999999999999999999999999842
Q ss_pred HHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC-
Q 002398 771 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT- 849 (928)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~- 849 (928)
+|... +.|..+++.+.+..
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 22222 56777776665532
Q ss_pred --CCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 850 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 850 --~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
...|++|||+.||++|++.|++++++.+. ...++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~-~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADA-HPLLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTS-CTTTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCc-cHHHHhhCCEEEeCC
Confidence 46899999999999999999999999543 334788999999864
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.72 E-value=1.7e-08 Score=109.18 Aligned_cols=56 Identities=16% Similarity=0.238 Sum_probs=46.8
Q ss_pred cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecc-c
Q 002398 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA-Q 893 (928)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~-~ 893 (928)
.|+..++.+.+..| ..|++|||+.||++|++.|++||+|.+. ....+..||+++. +
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na-~~~~k~~a~~v~~~~ 283 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVS 283 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTC-CHHHHHHSSEECSSC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCC-cHHHHhhCCEEEccC
Confidence 79998888876544 5799999999999999999999999544 3447889999987 5
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=5.3e-08 Score=103.26 Aligned_cols=59 Identities=29% Similarity=0.356 Sum_probs=49.2
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|. +....++.+||+++.+..
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVD 254 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCC
Confidence 479988888877655 57999999999999999999999995 444558999999998643
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.68 E-value=4.1e-08 Score=103.04 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=46.3
Q ss_pred ccHHHHHHHHhhc----CCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 836 KQKALVTRLVKTK----TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 836 ~qK~~iV~~l~~~----~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
-.|+..++.+.++ ....|++|||+.||++||+.|++||+|.+......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4699888888765 235799999999999999999999999654423466778888765
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=3.9e-08 Score=95.86 Aligned_cols=110 Identities=19% Similarity=0.102 Sum_probs=82.6
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhc
Q 002398 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (928)
Q Consensus 708 ~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+|+.|++.|+++.++||++...+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999842
Q ss_pred ccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CCCeEEEEcCCccCHH
Q 002398 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 864 (928)
Q Consensus 788 ~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~~~vl~iGDG~ND~~ 864 (928)
++... +.|...++.+.+. ....+++|||+.||+.
T Consensus 73 -----------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 11111 3455555544332 2368999999999999
Q ss_pred HHHhCceeEEEcCcchhhHhHhcceeccc------ccccchhhhcchhhh
Q 002398 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWC 908 (928)
Q Consensus 865 ml~~AdvGIa~~g~~~~~a~~~aD~vi~~------f~~l~~lll~~gr~~ 908 (928)
|++.|++++++.+ ....++..||+++.+ +..+.+.++ +|++.
T Consensus 110 ~~~~ag~~~~~~~-~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 110 LLKRVGIAGVPAS-APFYIRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp HHTTSSEEECCTT-SCHHHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred HHHHCCCeEEcCC-hHHHHHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 9999999999943 334488899999988 333445545 55543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=8e-08 Score=97.29 Aligned_cols=128 Identities=20% Similarity=0.259 Sum_probs=85.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+.....
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 128 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG-------------------------- 128 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC--------------------------
Confidence 356789999999999999999999999988888888777763210000000000
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEe-cCcccHHHHHHHHhhcCC---CeEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTL 854 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r-~sp~qK~~iV~~l~~~~~---~~vl 854 (928)
.++|+ +... +.+..|...+..+.+..+ ..++
T Consensus 129 ---------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~ 163 (211)
T 1l7m_A 129 ---------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTV 163 (211)
T ss_dssp ---------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEE
T ss_pred ---------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEE
Confidence 00000 1111 123567766665544333 5699
Q ss_pred EEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc--ccccch
Q 002398 855 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLER 899 (928)
Q Consensus 855 ~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~--f~~l~~ 899 (928)
+|||+.||++|++.|+++++|.+.+ ..+..||+++.+ +..|..
T Consensus 164 ~iGD~~~Di~~~~~ag~~~~~~~~~--~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 164 AVGDGANDISMFKKAGLKIAFCAKP--ILKEKADICIEKRDLREILK 208 (211)
T ss_dssp EEECSGGGHHHHHHCSEEEEESCCH--HHHTTCSEEECSSCGGGGGG
T ss_pred EEecChhHHHHHHHCCCEEEECCCH--HHHhhcceeecchhHHHHHH
Confidence 9999999999999999999996333 367789999876 444443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.62 E-value=4.2e-08 Score=102.23 Aligned_cols=55 Identities=15% Similarity=0.225 Sum_probs=46.6
Q ss_pred ecCcc--cHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhC--ceeEEEcCcchhhHhHhcceeccc
Q 002398 832 RSSPK--QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 832 r~sp~--qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~A--dvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
.+.|. .|+..++.+.++.+ |++|||+.||.+||+.| ++||+|.+. +..||+++.+
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 44554 79999999988667 99999999999999999 999999653 5689998866
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.61 E-value=4e-08 Score=104.36 Aligned_cols=62 Identities=24% Similarity=0.348 Sum_probs=48.8
Q ss_pred ecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 832 r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
.+.|. .|+..++.+.+..+ ..+++|||+.||++|++.|++||+|.+ .....+..||+++.+.
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n-~~~~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMEN-AIEKVKEASDIVTLTN 249 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTT-SCHHHHHHCSEECCCT
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecC-CCHHHHhhCCEEEccC
Confidence 34454 79988888766433 579999999999999999999999954 3444778899998753
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.60 E-value=4.5e-08 Score=104.15 Aligned_cols=59 Identities=20% Similarity=0.177 Sum_probs=47.9
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
..|+..++.+.+..| ..+++|||+.||++|++.|++||+|.+. ....+..||+++.+..
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na-~~~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDDNN 251 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTC-CHHHHHHCSEECCCGG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCc-cHHHHHhCCeeCcCCC
Confidence 479988888776534 5799999999999999999999999543 3447889999987643
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.59 E-value=6e-08 Score=97.41 Aligned_cols=117 Identities=18% Similarity=0.245 Sum_probs=88.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|++.|++++++|+.....+..+ +.+|+... ...+.....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~--------------------------- 129 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDG--------------------------- 129 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETT---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCC---------------------------
Confidence 7899999999999999999999999998888888 88886432 111111100
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCC
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG 859 (928)
........|..|...++.+ ....+++|||+
T Consensus 130 -----------------------------------------------~~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~ 159 (201)
T 4ap9_A 130 -----------------------------------------------KFQGIRLRFRDKGEFLKRF---RDGFILAMGDG 159 (201)
T ss_dssp -----------------------------------------------EEEEEECCSSCHHHHHGGG---TTSCEEEEECT
T ss_pred -----------------------------------------------ceECCcCCccCHHHHHHhc---CcCcEEEEeCC
Confidence 0011345677899888887 35679999999
Q ss_pred ccCHHHHHhCceeEEEcCcchhhHhHhcceecccccccchh
Q 002398 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 860 ~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
.||+.|++.|++||+|.+... .||+++.++..+..+
T Consensus 160 ~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 160 YADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp TCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 999999999999999954433 799999887766555
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=3.7e-08 Score=105.85 Aligned_cols=58 Identities=22% Similarity=0.262 Sum_probs=47.3
Q ss_pred cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
.|+..++.+.+..+ ..+++|||+.||++|++.|++||+|.+. ....+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~-~~~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTC-CHHHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCC-CHHHHhhCceeecCCC
Confidence 69988888876544 5799999999999999999999999543 3457888999987643
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.2e-07 Score=96.69 Aligned_cols=129 Identities=19% Similarity=0.246 Sum_probs=89.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 458999999999999999999999999999999999998885321111111110
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEec-CcccHHHHHHHHhhc---CCCeEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-SPKQKALVTRLVKTK---TSSTTL 854 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~-sp~qK~~iV~~l~~~---~~~~vl 854 (928)
.++| .+...+ ....|..+++.+.+. ....++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 011111 234566666655543 236799
Q ss_pred EEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchh
Q 002398 855 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (928)
Q Consensus 855 ~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~l 900 (928)
+|||+.||+.|++.|++++++.+.+ ..+..||+++.+.++ +..+
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~--~l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKE--VLKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCH--HHHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccH--HHHHhcceeecccCHHHHHHH
Confidence 9999999999999999999994333 378899999986544 4444
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=3.3e-07 Score=87.49 Aligned_cols=107 Identities=17% Similarity=0.362 Sum_probs=78.5
Q ss_pred ecCccHHHHHHHHHHC-CcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCc
Q 002398 533 AESPDEAAFVIAAREL-GFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 611 (928)
Q Consensus 533 ~~~p~e~alv~~a~~~-g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~ 611 (928)
++||...|++++|+.. |+.+..-. .. .....+|++..++..|.+ +|+ .+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~~~-----------------~~---~~~~~~F~a~~G~~Gv~v---~G~--~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERDVQ-----------------SL---HATFVPFTAQSRMSGINI---DNR--MIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCCHH-----------------HH---TCEEEEEETTTTEEEEEE---TTE--EEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCccccc-----------------cc---ccceeeccccCCCCeEEE---CCE--EEEEeCc
Confidence 5799999999999986 65331100 00 011357888777677744 453 5678999
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceE
Q 002398 612 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 691 (928)
Q Consensus 612 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~l 691 (928)
..|..++...+-..+..+.+.++.++.+|.+++++| .|..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCEE
Confidence 888888766543444567788899999999999999 67889
Q ss_pred eeeeeccccCCC
Q 002398 692 LGATAVEDKLQN 703 (928)
Q Consensus 692 lG~~~i~D~lr~ 703 (928)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.50 E-value=3.7e-07 Score=94.47 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=96.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc----CCceEEEEeCCCCccccccchhhHHHHHHHHHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALKA 774 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (928)
..+.+.+.++|++|+++|++++++||++...+..+...+|+.. .++..+..+++......+ +...+.+......
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~~~~ 96 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEWILWNEIRKR 96 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHHHHh
Confidence 4577889999999999999999999999999999998888632 111111111111011111 1111222111101
Q ss_pred hhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeE---EEEecCc--ccHHHHHHHHhhcC
Q 002398 775 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLVKTKT 849 (928)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~---v~~r~sp--~qK~~iV~~l~~~~ 849 (928)
...... .....+ ..... .+.+.+.. .+.....+..+......+ .+....| ..|...++.+.+..
T Consensus 97 ~~~~~~-~~~~~~-----~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~ 165 (231)
T 1wr8_A 97 FPNART-SYTMPD-----RRAGL--VIMRETIN---VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFL 165 (231)
T ss_dssp CTTCCB-CTTGGG-----CSSCE--EECTTTSC---HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHH
T ss_pred CCCceE-EecCCC-----ceeeE--EEECCCCC---HHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHc
Confidence 000000 000000 00111 22221000 011111111111111211 1123333 46888888776543
Q ss_pred C---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 850 S---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 850 ~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
+ ..+++|||+.||++|++.|++||+|.+. ....+..||+++.+..
T Consensus 166 ~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~-~~~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 166 GIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA-PKILKENADYVTKKEY 213 (231)
T ss_dssp TSCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHTTCSEECSSCH
T ss_pred CCCHHHEEEECCCHHHHHHHHHcCCeEEecCC-CHHHHhhCCEEecCCC
Confidence 3 5799999999999999999999999543 3346778999987643
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.7e-07 Score=103.43 Aligned_cols=138 Identities=20% Similarity=0.219 Sum_probs=94.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.++++.|++.|+++.++||.....+..+++.+|+...-...+.+.+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 78999999999999999999999999999999999999984211111111000
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEe-cCcccHHHHHHHHhhcCC---CeEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 855 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r-~sp~qK~~iV~~l~~~~~---~~vl~ 855 (928)
.++|. +... ..++.|..+++.+.+..| ..+++
T Consensus 309 --------------------~~tg~------------------------~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~ 344 (415)
T 3p96_A 309 --------------------TLTGR------------------------VVGPIIDRAGKATALREFAQRAGVPMAQTVA 344 (415)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEEee------------------------EccCCCCCcchHHHHHHHHHHcCcChhhEEE
Confidence 01110 0000 124457766666554333 67999
Q ss_pred EcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcchhhhHHH
Q 002398 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRR 911 (928)
Q Consensus 856 iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~gr~~~~~ 911 (928)
||||.||++|++.|++|+++.+.+ ..+..||+++...+. +..+ +-.+|.-+..
T Consensus 345 vGD~~~Di~~a~~aG~~va~~~~~--~~~~~ad~~i~~~~l~~ll~~-l~~~~~~~~~ 399 (415)
T 3p96_A 345 VGDGANDIDMLAAAGLGIAFNAKP--ALREVADASLSHPYLDTVLFL-LGVTRGEIEA 399 (415)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCH--HHHHHCSEEECSSCTTHHHHH-TTCCHHHHHH
T ss_pred EECCHHHHHHHHHCCCeEEECCCH--HHHHhCCEEEccCCHHHHHHH-hCCCHHHHHH
Confidence 999999999999999999994433 378899999875433 4444 5555554443
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.48 E-value=2.4e-07 Score=97.79 Aligned_cols=64 Identities=23% Similarity=0.342 Sum_probs=49.9
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchh
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 900 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~l 900 (928)
..|...++.+.++.+ ..+++|||+.||++|++.|++||+|.+ .....+..||+++.+... +.++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n-~~~~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQ-AKEDVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT-SCHHHHHHSSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecC-ccHHHHhhCCEEeccCchhhHHHH
Confidence 378888877765433 579999999999999999999999954 344578899999887655 5444
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-07 Score=92.34 Aligned_cols=97 Identities=12% Similarity=0.120 Sum_probs=74.4
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhc
Q 002398 708 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 787 (928)
Q Consensus 708 ~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (928)
+|+.|+++|++++++||++...+..+++.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999888742
Q ss_pred ccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeEEEEcCCccCHH
Q 002398 788 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDVG 864 (928)
Q Consensus 788 ~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ 864 (928)
++.. ...|...++.+.+..+ ..+++|||+.||+.
T Consensus 95 -----------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 95 -----------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp -----------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1111 2334545544433223 67999999999999
Q ss_pred HHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 865 MLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 865 ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
|++.|++++++.+. ...++..||+++.+.
T Consensus 132 ~a~~ag~~~~~~~~-~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 132 VMEKVGLSVAVADA-HPLLIPRADYVTRIA 160 (188)
T ss_dssp HHTTSSEEEECTTS-CTTTGGGSSEECSSC
T ss_pred HHHHCCCEEEecCc-CHHHHhcCCEEEeCC
Confidence 99999999988433 233677899999885
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.44 E-value=7.1e-07 Score=90.62 Aligned_cols=132 Identities=18% Similarity=0.260 Sum_probs=86.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceE--EEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ--VIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
.+.+++.++++.|++.|++++++|+.....+..+.+.+|+....... +.+.....
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 138 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS----------------------- 138 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB-----------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc-----------------------
Confidence 37899999999999999999999999999999999999884311110 11100000
Q ss_pred HHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEc
Q 002398 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iG 857 (928)
+ ..+.....+|..|...+..........++|||
T Consensus 139 ----------------------------~-------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vG 171 (219)
T 3kd3_A 139 ----------------------------F-------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIG 171 (219)
T ss_dssp ----------------------------E-------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEE
T ss_pred ----------------------------e-------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEE
Confidence 0 00011223445666555444222567899999
Q ss_pred CCccCHHHHHh--CceeEEEc-CcchhhHhHhcceecccccccchhh
Q 002398 858 DGANDVGMLQE--ADIGVGIS-GVEGMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 858 DG~ND~~ml~~--AdvGIa~~-g~~~~~a~~~aD~vi~~f~~l~~ll 901 (928)
|+.||++|+++ +.++|++. ++.....+..||+++.++..|..+|
T Consensus 172 D~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 172 DGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp SSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 99999999976 22445442 3333446788999999887776663
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.43 E-value=6.3e-07 Score=97.23 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=83.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.++++.|++.|+++.++||.....+..+++.+|+...-...+...+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984311111111110
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEe-cCcccHHHHHHHHhhc---CCCeEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTK---TSSTTLA 855 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r-~sp~qK~~iV~~l~~~---~~~~vl~ 855 (928)
.++|. +... ..++.|..+++.+.+. ....+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00000 0000 1234565555554432 2367999
Q ss_pred EcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecc
Q 002398 856 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 892 (928)
Q Consensus 856 iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~ 892 (928)
|||+.||+.|.+.|++|+++.+.+. .+..||.++.
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 9999999999999999999943333 6778888875
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=8.1e-07 Score=93.64 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=44.5
Q ss_pred ccHHHHHHHHhhcCC-----CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 836 KQKALVTRLVKTKTS-----STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~-----~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
..|+..++.+.+..+ ..+++|||+.||++|++.|++||+|.+... . .++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 589998888877555 679999999999999999999999965544 2 67787765
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=91.77 Aligned_cols=57 Identities=21% Similarity=0.297 Sum_probs=45.7
Q ss_pred cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHh-------cceecccc
Q 002398 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDIAIAQF 894 (928)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~-------aD~vi~~f 894 (928)
.|+..++.+.+..+ ..+++|||+.||++|++.|++||+|.+ .....+.. ||++..+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~n-a~~~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRN-AQPELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTT-CCHHHHHHHHHHCCTTEEECSSC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcC-CcHHHHHHHhcccccceeecCCc
Confidence 79988888876544 579999999999999999999999954 34446664 78888653
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.40 E-value=4.6e-07 Score=99.37 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=57.4
Q ss_pred cccHHHHHHHHhhc-CCCeEEEEcCCccCHHHHHhC----ceeEEEcCcchhhHhHhcceecccccc------cchhhhc
Q 002398 835 PKQKALVTRLVKTK-TSSTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRF------LERLLLV 903 (928)
Q Consensus 835 p~qK~~iV~~l~~~-~~~~vl~iGDG~ND~~ml~~A----dvGIa~~g~~~~~a~~~aD~vi~~f~~------l~~lll~ 903 (928)
+.+|+..++.+... ..+.|++||||.||++|++.| ++||+| +. ...++..||+++.+.+. |.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na-~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG-NEYALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC-CHHHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC-CHHHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 45799888866531 114499999999999999999 999999 54 44588999999976332 5555 77
Q ss_pred chhhhHHHhhh
Q 002398 904 HGHWCYRRISS 914 (928)
Q Consensus 904 ~gr~~~~~i~~ 914 (928)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 899887 6555
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=6.2e-07 Score=90.60 Aligned_cols=125 Identities=22% Similarity=0.129 Sum_probs=87.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCC--ceEEEEeCCCCccccccchhhHHHHHHHHHHhh
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG--MRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 356799999999999999999999999999999998888874311 00
Q ss_pred HHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecC--cccHHHHHHHHhhc---CCC
Q 002398 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTK---TSS 851 (928)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~s--p~qK~~iV~~l~~~---~~~ 851 (928)
+++.-. .+-|..+++.+.+. ...
T Consensus 118 ----------------------------------------------------i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 118 ----------------------------------------------------VLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp ----------------------------------------------------EECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred ----------------------------------------------------EEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 111100 11122233322222 336
Q ss_pred eEEEEcCCccCHHHHHhCce-eEEEcCcchhhHhHhcceecccccccchhhhcchhh
Q 002398 852 TTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHW 907 (928)
Q Consensus 852 ~vl~iGDG~ND~~ml~~Adv-GIa~~g~~~~~a~~~aD~vi~~f~~l~~lll~~gr~ 907 (928)
.+++|||+.||+.|.+.|++ +|+|.+.. ...+..||+++.++.-|..++=.+++.
T Consensus 146 ~~i~iGD~~~Di~~a~~aG~~~i~v~~~~-~~~~~~ad~v~~~~~el~~~~~~~~~~ 201 (205)
T 3m9l_A 146 RMVMVGDYRFDLDCGRAAGTRTVLVNLPD-NPWPELTDWHARDCAQLRDLLSAEGHH 201 (205)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEECSSSS-CSCGGGCSEECSSHHHHHHHHHHTTCC
T ss_pred HEEEECCCHHHHHHHHHcCCEEEEEeCCC-CcccccCCEEeCCHHHHHHHHHhcccc
Confidence 79999999999999999999 99995433 235678999999888877774444433
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.29 E-value=3.4e-06 Score=89.64 Aligned_cols=49 Identities=10% Similarity=0.114 Sum_probs=40.4
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
|.||+.- .+.+-+.+.++|++|++.|++++++||++...+..+..++++
T Consensus 17 DGTLl~~---~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 17 DGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp TTTTSCS---SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCCCCCC---CCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4555531 234567899999999999999999999999999999998876
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-06 Score=87.35 Aligned_cols=119 Identities=13% Similarity=0.086 Sum_probs=80.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 45789999999999999999999999988888777777764321111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccH--HHHHHHHhhc---CCCeEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK--ALVTRLVKTK---TSSTTL 854 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK--~~iV~~l~~~---~~~~vl 854 (928)
+++...+..| ...++.+.+. ....++
T Consensus 141 -------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 141 -------------------------------------------------ASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171 (226)
T ss_dssp -------------------------------------------------EECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred -------------------------------------------------EeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 1111111111 2333322222 346799
Q ss_pred EEcCCccCHHHHHhCceeEEEcCc---chhhHhHhcceecccccccchh
Q 002398 855 AIGDGANDVGMLQEADIGVGISGV---EGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 855 ~iGDG~ND~~ml~~AdvGIa~~g~---~~~~a~~~aD~vi~~f~~l~~l 900 (928)
+|||+.||+.|++.|++++++-.. .....+..||+++.++..|..-
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 999999999999999999988221 1122567899999887765544
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.1e-06 Score=83.28 Aligned_cols=106 Identities=16% Similarity=0.089 Sum_probs=77.7
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHh
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (928)
+.+++.++|+.|++.|++++++||++...+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 34667899999999999999999999999999999988742
Q ss_pred hhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CCCeEEEEc
Q 002398 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIG 857 (928)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~~~vl~iG 857 (928)
.|.. +..|...++.+.+. ....+++||
T Consensus 78 ------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 ------------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp ------------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ------------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 12233333322221 335799999
Q ss_pred CCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc
Q 002398 858 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
|+.||+.|.+.|++++++.+. ....+..||+++.+...
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~-~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNA-VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECSSCSS
T ss_pred CCHHHHHHHHHCCCeEEecCc-cHHHHhhCCEEecCCCC
Confidence 999999999999999988433 33367789999987543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.28 E-value=6.9e-07 Score=92.35 Aligned_cols=123 Identities=24% Similarity=0.253 Sum_probs=84.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
.++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999999988888887532111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCccc--HHHHHHHHhhcCCCeEEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ--KALVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~q--K~~iV~~l~~~~~~~vl~i 856 (928)
++.++.. ..-.|+- -..+++.+.- ....+++|
T Consensus 150 ---------------------~~~~~~~------------------------~~~kp~~~~~~~~~~~lg~-~~~~~i~v 183 (237)
T 4ex6_A 150 ---------------------IAGDDSV------------------------ERGKPHPDMALHVARGLGI-PPERCVVI 183 (237)
T ss_dssp ---------------------EECTTTS------------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEE
T ss_pred ---------------------EEeCCCC------------------------CCCCCCHHHHHHHHHHcCC-CHHHeEEE
Confidence 1111000 0011111 1123333332 34689999
Q ss_pred cCCccCHHHHHhCce---eEEEcCcchhhHhH-hcceecccccccchh
Q 002398 857 GDGANDVGMLQEADI---GVGISGVEGMQAVM-SSDIAIAQFRFLERL 900 (928)
Q Consensus 857 GDG~ND~~ml~~Adv---GIa~~g~~~~~a~~-~aD~vi~~f~~l~~l 900 (928)
||+.||+.|.+.|++ +|++........+. .||+++.++..|..+
T Consensus 184 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 184 GDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp ESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 999999999999999 77774343233444 799999988877766
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.7e-06 Score=88.54 Aligned_cols=124 Identities=18% Similarity=0.120 Sum_probs=88.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 131 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------- 131 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee---------------------------------
Confidence 46789999999999999999999999999888888888887532111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCc--ccHHHHHHHHhhc---CCCeE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSSTT 853 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp--~qK~~iV~~l~~~---~~~~v 853 (928)
++.+...+ ..|..+++.+.+. ....+
T Consensus 132 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 132 -------------------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp -------------------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred -------------------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 12222222 2355555444333 23589
Q ss_pred EEEcCCccCHHHHHhCce---eEEEcCcchhh-HhHhcceecccccccchhhhcc
Q 002398 854 LAIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDIAIAQFRFLERLLLVH 904 (928)
Q Consensus 854 l~iGDG~ND~~ml~~Adv---GIa~~g~~~~~-a~~~aD~vi~~f~~l~~lll~~ 904 (928)
++|||+.||+.|.+.|++ +|++....... .+..||+++.++..|..++...
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred EEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 999999999999999999 55553322222 2578999999988887775433
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.24 E-value=4.4e-06 Score=86.00 Aligned_cols=41 Identities=15% Similarity=0.025 Sum_probs=39.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+.+++.++|+.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999984
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=2.6e-06 Score=89.88 Aligned_cols=56 Identities=14% Similarity=0.227 Sum_probs=46.0
Q ss_pred cHHHHHHHHhhcCCCeEEEEcC----CccCHHHHHhCc-eeEEEcCcchhhHhHhcceeccc
Q 002398 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~Ad-vGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
.|+..++.|.......|++||| |.||++||+.|+ +|++| ++.....+..||+++..
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 6998888882113468999999 999999999999 69999 56666689999998754
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=87.84 Aligned_cols=129 Identities=19% Similarity=0.248 Sum_probs=88.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCc--eEEEEeCCCCccccccchhhHHHHHHHHHHhh
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM--RQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (928)
-++.|++.++|+.|++.|++++++||.....+..+.+.+|+..... ..+.+...
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~------------------------ 140 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFN------------------------ 140 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTT------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCC------------------------
Confidence 3689999999999999999999999999999999999999853110 00000000
Q ss_pred HHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEec-----CcccHHHHHHHHhhcCC-
Q 002398 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-----SPKQKALVTRLVKTKTS- 850 (928)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~-----sp~qK~~iV~~l~~~~~- 850 (928)
..+..... .+..|..+++.+.+..+
T Consensus 141 -------------------------------------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~ 171 (225)
T 1nnl_A 141 -------------------------------------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHF 171 (225)
T ss_dssp -------------------------------------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCC
T ss_pred -------------------------------------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCC
Confidence 00011111 12356666665544333
Q ss_pred CeEEEEcCCccCHHHHHhCceeEEEcCcc-hhhHhHhcceecccccccchh
Q 002398 851 STTLAIGDGANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~AdvGIa~~g~~-~~~a~~~aD~vi~~f~~l~~l 900 (928)
..+++|||+.||+.|.+.|+++|++.... .......+|+++.++..+..+
T Consensus 172 ~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 172 KKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp SCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred CcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 67999999999999999999988884321 222445789999888776655
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.3e-06 Score=91.15 Aligned_cols=50 Identities=18% Similarity=0.276 Sum_probs=40.1
Q ss_pred cHHHHHHHHhhcCCCeEEEEcC----CccCHHHHHhCc-eeEEEcCcchhhHhHhcc
Q 002398 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSD 888 (928)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~Ad-vGIa~~g~~~~~a~~~aD 888 (928)
.|+..++.|.+ ....|++||| |.||.+||+.|+ +|++|.+.+ ...+..++
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~-~~~~~~~~ 241 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYK-DTIAEVEK 241 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHH-HHHHHHHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHH-HHHHHHHH
Confidence 79999999987 6789999999 799999999996 899995543 32444443
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.18 E-value=9.3e-06 Score=81.88 Aligned_cols=125 Identities=19% Similarity=0.172 Sum_probs=87.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|++. ++++++|+.....+..+.+.+|+...-...+......
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5789999999999999 9999999999999999999998753110001110000
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCC
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG 859 (928)
.....-.-.|..|..+++.+.. ....+++|||+
T Consensus 122 ----------------------------------------------~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~ 154 (206)
T 1rku_A 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred ----------------------------------------------eEEeeecCCCchHHHHHHHHHh-cCCEEEEEeCC
Confidence 0000012457789999998876 67799999999
Q ss_pred ccCHHHHHhCceeEEEcCcchhhHhHh-ccee-cccccccchh
Q 002398 860 ANDVGMLQEADIGVGISGVEGMQAVMS-SDIA-IAQFRFLERL 900 (928)
Q Consensus 860 ~ND~~ml~~AdvGIa~~g~~~~~a~~~-aD~v-i~~f~~l~~l 900 (928)
.||+.|.+.|++++.+...+. .+.. ++++ +.++..+..+
T Consensus 155 ~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 155 YNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp STTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred hhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 999999999999999843332 3444 4554 5555544444
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.3e-06 Score=87.81 Aligned_cols=128 Identities=16% Similarity=0.041 Sum_probs=85.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 136 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--------------------------------- 136 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe---------------------------------
Confidence 35679999999999999999999999999999998888887531110
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcC---CCeEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLA 855 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~---~~~vl~ 855 (928)
++.++.. .. ..-|..+++.+.+.. ...+++
T Consensus 137 ---------------------~~~~~~~------------------------~~--~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 137 ---------------------IVTRDDV------------------------SY--GKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ---------------------EECGGGS------------------------SC--CTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred ---------------------eeccccC------------------------CC--CCCChHHHHHHHHHhCCCHHHEEE
Confidence 1111000 00 111233333332223 367999
Q ss_pred EcCCccCHHHHHhCce---eEEEcCcchhhHhHh-cceecccccccchhhhcchh
Q 002398 856 IGDGANDVGMLQEADI---GVGISGVEGMQAVMS-SDIAIAQFRFLERLLLVHGH 906 (928)
Q Consensus 856 iGDG~ND~~ml~~Adv---GIa~~g~~~~~a~~~-aD~vi~~f~~l~~lll~~gr 906 (928)
|||+.||+.|.+.|++ +|++........+.. ||+++.++..|..+|-.+++
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIAS 224 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTCC
T ss_pred EeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHhh
Confidence 9999999999999999 343332333334444 99999998888877433333
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.6e-06 Score=86.32 Aligned_cols=121 Identities=17% Similarity=0.094 Sum_probs=84.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 155 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKY--------------------------------- 155 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEE---------------------------------
Confidence 45789999999999999999999999999889888888887532111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCc--ccHHHHHHHHhhc---C-CCe
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---T-SST 852 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp--~qK~~iV~~l~~~---~-~~~ 852 (928)
++++...+ .-|..+++.+.+. . ...
T Consensus 156 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 156 -------------------------------------------------IAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp -------------------------------------------------EEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred -------------------------------------------------EEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 12222222 2344444433332 3 568
Q ss_pred EEEEcCCccCHHHHHhCce---eEEEcCcc-hhhHhHhcceecccccccchhh
Q 002398 853 TLAIGDGANDVGMLQEADI---GVGISGVE-GMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 853 vl~iGDG~ND~~ml~~Adv---GIa~~g~~-~~~a~~~aD~vi~~f~~l~~ll 901 (928)
+++|||+.||+.|.+.|++ +|++.... ....+..||+++.++.-|..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9999999999999999999 44432222 2212478999999988877664
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.09 E-value=6.4e-06 Score=83.81 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=36.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+.+++.+.++.|++.|++++++|+.....+......+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 34689999999999999999999999988888888777764
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.05 E-value=2.9e-06 Score=88.53 Aligned_cols=53 Identities=19% Similarity=0.250 Sum_probs=41.3
Q ss_pred cHHHHHHHHhhcCCCeEEEEcC----CccCHHHHHhCce-eEEEcCcchhhHhHhccee
Q 002398 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDIA 890 (928)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~Adv-GIa~~g~~~~~a~~~aD~v 890 (928)
.|+..++.+.......|++||| |.||++||+.|+. |++| ++.....|..||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av-~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe-eCCCHHHHHHHhhc
Confidence 6998888872113478999999 9999999999987 9999 45556689999987
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.04 E-value=7.9e-06 Score=82.31 Aligned_cols=122 Identities=11% Similarity=0.043 Sum_probs=83.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 135 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIV--------------------------------- 135 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeE---------------------------------
Confidence 57899999999999999999999999999999998888875321111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCccc--HHHHHHHHhhcCCCeEEEEc
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ--KALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~q--K~~iV~~l~~~~~~~vl~iG 857 (928)
+.++.. ....|.. -..+.+.+.- ....+++||
T Consensus 136 ---------------------~~~~~~------------------------~~~kp~~~~~~~~~~~~~~-~~~~~~~iG 169 (214)
T 3e58_A 136 ---------------------LSGEEF------------------------KESKPNPEIYLTALKQLNV-QASRALIIE 169 (214)
T ss_dssp ---------------------EEGGGC------------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ---------------------eecccc------------------------cCCCCChHHHHHHHHHcCC-ChHHeEEEe
Confidence 111000 0011211 1233333332 346799999
Q ss_pred CCccCHHHHHhCceeEEEcCcc-hhhHhHhcceecccccccchh
Q 002398 858 DGANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~-~~~a~~~aD~vi~~f~~l~~l 900 (928)
|+.||+.|.+.|++++.+.+.. .......+|+++.++..|..+
T Consensus 170 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 170 DSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp CSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred ccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 9999999999999988764321 111346799999888776654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.02 E-value=6.1e-06 Score=82.57 Aligned_cols=116 Identities=18% Similarity=0.180 Sum_probs=77.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
.+.+++.+.++.|++.|++++++|+....... ....+|+...-..
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~---------------------------------- 129 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTE---------------------------------- 129 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEE----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheee----------------------------------
Confidence 46899999999999999999999999887777 6666665321000
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCccc--HHHHHHHHhhcCCCeEEEEc
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ--KALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~q--K~~iV~~l~~~~~~~vl~iG 857 (928)
++.+... ....|.- -..+.+.+.- ....+++||
T Consensus 130 --------------------~~~~~~~------------------------~~~Kp~~~~~~~~~~~~~i-~~~~~~~iG 164 (207)
T 2go7_A 130 --------------------ILTSQSG------------------------FVRKPSPEAATYLLDKYQL-NSDNTYYIG 164 (207)
T ss_dssp --------------------EECGGGC------------------------CCCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred --------------------EEecCcC------------------------CCCCCCcHHHHHHHHHhCC-CcccEEEEC
Confidence 0110000 0011111 1233444432 446799999
Q ss_pred CCccCHHHHHhCcee-EEEcCcchhhHhHhcceecccccccchh
Q 002398 858 DGANDVGMLQEADIG-VGISGVEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 858 DG~ND~~ml~~AdvG-Ia~~g~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
|+.||+.|++.|+++ |+|.... . .||+++.++..|..+
T Consensus 165 D~~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 165 DRTLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp SSHHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999999999999998 6774332 2 689999887766655
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.2e-05 Score=82.54 Aligned_cols=118 Identities=16% Similarity=0.184 Sum_probs=74.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|++.|+++.++|+.+. +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999754 6667777776431110
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCC
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG 859 (928)
++.++.. -...-.|.-=..+.+.+.- ....+++|||+
T Consensus 136 --------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs 172 (233)
T 3nas_A 136 --------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDA 172 (233)
T ss_dssp --------------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECS
T ss_pred --------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCC
Confidence 1111000 0000011111234444432 44789999999
Q ss_pred ccCHHHHHhCceeEEEcCcchhhHhHhcceecccccccc
Q 002398 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 898 (928)
Q Consensus 860 ~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l~ 898 (928)
.||+.|.+.|++++++.+... ..+ .||+++.++..+.
T Consensus 173 ~~Di~~a~~aG~~~~~~~~~~-~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 173 EAGISAIKSAGMFAVGVGQGQ-PML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred HHHHHHHHHcCCEEEEECCcc-ccc-cCCEEeCChHhCC
Confidence 999999999999999855433 234 8999998877654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.00 E-value=9.5e-06 Score=84.37 Aligned_cols=123 Identities=21% Similarity=0.206 Sum_probs=82.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~-------------------------------- 160 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEM-------------------------------- 160 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEE--------------------------------
Confidence 467899999999999999999999999999999999998875321111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcc--cHHHHHHHHhhcCCCeEEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK--QKALVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~--qK~~iV~~l~~~~~~~vl~i 856 (928)
+.++.. ....|. --..+++.+.- ....+++|
T Consensus 161 ----------------------~~~~~~------------------------~~~Kp~~~~~~~~~~~~~~-~~~~~~~v 193 (243)
T 2hsz_A 161 ----------------------LGGQSL------------------------PEIKPHPAPFYYLCGKFGL-YPKQILFV 193 (243)
T ss_dssp ----------------------ECTTTS------------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEE
T ss_pred ----------------------EecccC------------------------CCCCcCHHHHHHHHHHhCc-ChhhEEEE
Confidence 111000 011222 11233344432 34679999
Q ss_pred cCCccCHHHHHhCceeE-EEc-Cc--chhhHhHhcceecccccccchh
Q 002398 857 GDGANDVGMLQEADIGV-GIS-GV--EGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGI-a~~-g~--~~~~a~~~aD~vi~~f~~l~~l 900 (928)
||+.||+.|.+.|++++ ++. |. ........+|+++.++..|..+
T Consensus 194 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 194 GDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred cCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 99999999999999995 443 21 1122456799999887766554
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.97 E-value=9.4e-06 Score=89.98 Aligned_cols=40 Identities=8% Similarity=0.193 Sum_probs=38.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
.+.|++++.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999986
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.95 E-value=8.5e-06 Score=82.78 Aligned_cols=46 Identities=7% Similarity=0.049 Sum_probs=37.7
Q ss_pred CCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccccc
Q 002398 850 SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897 (928)
Q Consensus 850 ~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l 897 (928)
...+++|||+.||+.|++.|+++++|.+.. ...+ .||+++.++..+
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~-~~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRP-EDLG-DDIVIVPDTSHY 207 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCH-HHHC-SSSEEESSGGGC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCH-HHhc-cccchhcCHHhC
Confidence 467999999999999999999999996543 3355 899999876654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.5e-05 Score=80.07 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=79.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-.+.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 148 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDS--------------------------------- 148 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheee---------------------------------
Confidence 35789999999999999999999999999999888888887532111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccH------HHHHHHHhhcCCC-
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK------ALVTRLVKTKTSS- 851 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK------~~iV~~l~~~~~~- 851 (928)
++++...+..| ..+.+.+.- ...
T Consensus 149 -------------------------------------------------i~~~~~~~~~Kp~~~~~~~~~~~lgi-~~~~ 178 (231)
T 3kzx_A 149 -------------------------------------------------IIGSGDTGTIKPSPEPVLAALTNINI-EPSK 178 (231)
T ss_dssp -------------------------------------------------EEEETSSSCCTTSSHHHHHHHHHHTC-CCST
T ss_pred -------------------------------------------------EEcccccCCCCCChHHHHHHHHHcCC-Cccc
Confidence 12222112122 233343332 344
Q ss_pred eEEEEcCCccCHHHHHhCce-eEEEcCcchhhHhHhcceecccccccchh
Q 002398 852 TTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 852 ~vl~iGDG~ND~~ml~~Adv-GIa~~g~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
.+++|||+.||+.|.+.|++ +|.+ ++... ..+|+++.++..|..+
T Consensus 179 ~~v~vGD~~~Di~~a~~aG~~~v~~-~~~~~---~~~~~~~~~~~el~~~ 224 (231)
T 3kzx_A 179 EVFFIGDSISDIQSAIEAGCLPIKY-GSTNI---IKDILSFKNFYDIRNF 224 (231)
T ss_dssp TEEEEESSHHHHHHHHHTTCEEEEE-CC--------CCEEESSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHCCCeEEEE-CCCCC---CCCceeeCCHHHHHHH
Confidence 79999999999999999997 5566 43321 3678888887776665
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.89 E-value=1.1e-05 Score=82.50 Aligned_cols=123 Identities=17% Similarity=0.168 Sum_probs=82.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-..+
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i-------------------------------- 129 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLI-------------------------------- 129 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEE--------------------------------
Confidence 457899999999999999999999999998888888888874321111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcc--cHHHHHHHHhhcCCCeEEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPK--QKALVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~--qK~~iV~~l~~~~~~~vl~i 856 (928)
+.+.. + ....|. --..+++.+.- ....+++|
T Consensus 130 ----------------------~~~~~-----------------------~-~~~Kp~~~~~~~~~~~~~~-~~~~~~~v 162 (222)
T 2nyv_A 130 ----------------------VGGDT-----------------------F-GEKKPSPTPVLKTLEILGE-EPEKALIV 162 (222)
T ss_dssp ----------------------ECTTS-----------------------S-CTTCCTTHHHHHHHHHHTC-CGGGEEEE
T ss_pred ----------------------EecCc-----------------------C-CCCCCChHHHHHHHHHhCC-CchhEEEE
Confidence 01000 0 001121 11233343332 34679999
Q ss_pred cCCccCHHHHHhCcee-EEEc-CcchhhHhHhcceecccccccchhh
Q 002398 857 GDGANDVGMLQEADIG-VGIS-GVEGMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 857 GDG~ND~~ml~~AdvG-Ia~~-g~~~~~a~~~aD~vi~~f~~l~~ll 901 (928)
||+.||+.|.+.|+++ |++. +...... ..+|+++.++..+..+|
T Consensus 163 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 163 GDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp ESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999999999999998 6663 2221112 56899988877766653
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=2e-05 Score=83.83 Aligned_cols=125 Identities=15% Similarity=0.067 Sum_probs=83.2
Q ss_pred cCCCChHHHHHHHHHcCC--eEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 700 KLQNGVPECIDKLAQAGI--KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI--~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
++.+++.++++.|++.|+ +++++|+.....+..+.+.+|+...-..++..+... .
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~-~---------------------- 198 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSR-T---------------------- 198 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSS-C----------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCC-C----------------------
Confidence 567899999999999999 999999999998888888888753211111000000 0
Q ss_pred HHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CC-CeE
Q 002398 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TS-STT 853 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~-~~v 853 (928)
.. ..++-|..+++.+.+. .. ..|
T Consensus 199 ---------------------------------------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 199 ---------------------------------------------------DT--LVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp ---------------------------------------------------SS--CCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred ---------------------------------------------------cc--cCCCcCHHHHHHHHHHcCCCCcccE
Confidence 00 1122344334333222 34 689
Q ss_pred EEEcCCccCHHHHHhCceeEEEcCcchh-----hHhHhcceecccccccchh
Q 002398 854 LAIGDGANDVGMLQEADIGVGISGVEGM-----QAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 854 l~iGDG~ND~~ml~~AdvGIa~~g~~~~-----~a~~~aD~vi~~f~~l~~l 900 (928)
++|||+.||+.|.+.|++|++|...... .....||+++.++.-|..+
T Consensus 226 i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp EEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9999999999999999998776322211 0134789999988877766
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1e-05 Score=85.12 Aligned_cols=41 Identities=32% Similarity=0.294 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 143 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 143 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 56799999999999999999999999988887777766653
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.87 E-value=2.2e-05 Score=81.14 Aligned_cols=137 Identities=12% Similarity=0.134 Sum_probs=88.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.|++.++|+.|+++|++++++|+.....+..+.+ ||... ..++.-.......
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~---------------------- 130 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDND---------------------- 130 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSS----------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCC----------------------
Confidence 4689999999999999999999999999988888877 66433 2222211100000
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcC
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGD 858 (928)
.+...-..+ ....+.+.....|..+++.+.. ....+++|||
T Consensus 131 -------~~~~~~~kp-------------------------------~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGD 171 (236)
T 2fea_A 131 -------YIHIDWPHS-------------------------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGD 171 (236)
T ss_dssp -------BCEEECTTC-------------------------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEEC
T ss_pred -------ceEEecCCC-------------------------------CccccccccCCcHHHHHHHHhc-cCCeEEEEeC
Confidence 000000000 0000111125578888888865 5678999999
Q ss_pred CccCHHHHHhCceeEEEcCcchhhHhHh--cceecccccccchh
Q 002398 859 GANDVGMLQEADIGVGISGVEGMQAVMS--SDIAIAQFRFLERL 900 (928)
Q Consensus 859 G~ND~~ml~~AdvGIa~~g~~~~~a~~~--aD~vi~~f~~l~~l 900 (928)
+.+|+.|.+.|++.+...+.. ...... +|+++.++..|..+
T Consensus 172 s~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 172 SVTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp CGGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred ChHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 999999999999988643221 212232 78888887777666
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.85 E-value=3.6e-05 Score=78.58 Aligned_cols=116 Identities=18% Similarity=0.031 Sum_probs=80.2
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 700 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
++.+++.+.++.|++.| +++.++|+.....+..+.+.+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 56899999999999999 9999999988888888877777642110
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CCCeEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 855 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~~~vl~ 855 (928)
. +++...| |..+++.+.++ ....+++
T Consensus 151 ------------------------------------------------~-~~~~~kp--k~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 ------------------------------------------------H-IEVMSDK--TEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp ------------------------------------------------E-EEEESCC--SHHHHHHHHHHHTCCGGGEEE
T ss_pred ------------------------------------------------e-eeecCCC--CHHHHHHHHHHhCCCcceEEE
Confidence 1 2222233 45444444333 3367999
Q ss_pred EcCCc-cCHHHHHhCceeEEEc------CcchhhHhH-hcceecccccccchh
Q 002398 856 IGDGA-NDVGMLQEADIGVGIS------GVEGMQAVM-SSDIAIAQFRFLERL 900 (928)
Q Consensus 856 iGDG~-ND~~ml~~AdvGIa~~------g~~~~~a~~-~aD~vi~~f~~l~~l 900 (928)
|||+. ||+.|.+.|++++.+- |........ .+|+++.++.-|..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 99996 9999999999998773 122111123 348998887776554
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.4e-05 Score=81.78 Aligned_cols=121 Identities=17% Similarity=0.060 Sum_probs=83.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 142 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHL-------------------------------- 142 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEE--------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhccee--------------------------------
Confidence 457899999999999999999999999998888888888875321111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCc--ccHHHHHHHHhhc---CCCeE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSP--KQKALVTRLVKTK---TSSTT 853 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp--~qK~~iV~~l~~~---~~~~v 853 (928)
+.+...+ +-|..+++.+.+. ....+
T Consensus 143 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 143 --------------------------------------------------ISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp --------------------------------------------------EEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred --------------------------------------------------EehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 1111111 1122233322222 34679
Q ss_pred EEEcCCccCHHHHHhCceeEEEcC---cchhhHhHhcceecccccccchhh
Q 002398 854 LAIGDGANDVGMLQEADIGVGISG---VEGMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 854 l~iGDG~ND~~ml~~AdvGIa~~g---~~~~~a~~~aD~vi~~f~~l~~ll 901 (928)
++|||+.||+.|.+.|++++.+-. +.....+..+|+++.++..|..+|
T Consensus 173 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 173 LFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp EEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred EEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 999999999999999999998832 112223468999999887776663
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=2.8e-05 Score=79.77 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~a-GI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999998888888888874
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.4e-05 Score=77.03 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCccCHHHHHhCcee-EEEc-CcchhhHh----Hhcceecccccccchhhh
Q 002398 849 TSSTTLAIGDGANDVGMLQEADIG-VGIS-GVEGMQAV----MSSDIAIAQFRFLERLLL 902 (928)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~AdvG-Ia~~-g~~~~~a~----~~aD~vi~~f~~l~~lll 902 (928)
....+++|||+.||+.|.+.|++. |++. |....... ..+|+++.++.-|..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 446899999999999999999963 2332 33222222 457999999887777643
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.2e-05 Score=82.67 Aligned_cols=124 Identities=10% Similarity=-0.033 Sum_probs=84.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..++
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 146 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVL------------------------------- 146 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEE-------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEE-------------------------------
Confidence 4578999999999999999999999999998888888888753211111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccH--HHHHHHHhhcCCCeEEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK--ALVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK--~~iV~~l~~~~~~~vl~i 856 (928)
.++.. ....|.-. ..+.+.+.- ....+++|
T Consensus 147 -----------------------~~~~~------------------------~~~kp~~~~~~~~~~~~~~-~~~~~~~v 178 (233)
T 3umb_A 147 -----------------------SVDAV------------------------RLYKTAPAAYALAPRAFGV-PAAQILFV 178 (233)
T ss_dssp -----------------------EGGGT------------------------TCCTTSHHHHTHHHHHHTS-CGGGEEEE
T ss_pred -----------------------Eeccc------------------------CCCCcCHHHHHHHHHHhCC-CcccEEEE
Confidence 11000 00112111 123333332 34689999
Q ss_pred cCCccCHHHHHhCceeEEEc---CcchhhHhHhcceecccccccchhh
Q 002398 857 GDGANDVGMLQEADIGVGIS---GVEGMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGIa~~---g~~~~~a~~~aD~vi~~f~~l~~ll 901 (928)
||+.||+.|.+.|++++++- ++.....+..+|+++.++..|..+|
T Consensus 179 GD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 179 SSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 99999999999999999882 2222224567999999988877774
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.82 E-value=2.7e-05 Score=82.13 Aligned_cols=41 Identities=29% Similarity=0.165 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999998888888777764
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.82 E-value=1.6e-05 Score=80.18 Aligned_cols=121 Identities=14% Similarity=0.173 Sum_probs=79.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.+.++.|++. ++++++|+.....+..+.+.+|+...-.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 126 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA---------------------------------- 126 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE----------------------------------
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc----------------------------------
Confidence 35789999999999999 9999999999988888888887742100
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccH--HHHHHHHhhcCCCeEEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK--ALVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK--~~iV~~l~~~~~~~vl~i 856 (928)
.++.+... ....|.-. ..+.+.+.- ....+++|
T Consensus 127 --------------------~~~~~~~~------------------------~~~KP~~~~~~~~~~~~~~-~~~~~i~v 161 (209)
T 2hdo_A 127 --------------------VTISADDT------------------------PKRKPDPLPLLTALEKVNV-APQNALFI 161 (209)
T ss_dssp --------------------EEECGGGS------------------------SCCTTSSHHHHHHHHHTTC-CGGGEEEE
T ss_pred --------------------EEEecCcC------------------------CCCCCCcHHHHHHHHHcCC-CcccEEEE
Confidence 01111000 00112111 223333322 34689999
Q ss_pred cCCccCHHHHHhCceeEEEcC--cc-hhhHhHhcceecccccccchh
Q 002398 857 GDGANDVGMLQEADIGVGISG--VE-GMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGIa~~g--~~-~~~a~~~aD~vi~~f~~l~~l 900 (928)
||+.||+.|.+.|++++.+.+ .. ....+. +|+++.++..|..+
T Consensus 162 GD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 162 GDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp ESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred CCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 999999999999999998732 21 222333 99999887766554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.3e-05 Score=80.35 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=79.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC---hhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhh
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~---~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (928)
.+.+++.+.++.|++.|++++++|+.. ...+....+.+|+...-..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~------------------------------- 147 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK------------------------------- 147 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE-------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh-------------------------------
Confidence 358999999999999999999999998 7777777777776431111
Q ss_pred HHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CCCeE
Q 002398 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTT 853 (928)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~~~v 853 (928)
++.+... ....| +..+.+.+.+. ....+
T Consensus 148 -----------------------~~~~~~~------------------------~~~kp--~~~~~~~~~~~lgi~~~~~ 178 (235)
T 2om6_A 148 -----------------------TFFADEV------------------------LSYKP--RKEMFEKVLNSFEVKPEES 178 (235)
T ss_dssp -----------------------EEEHHHH------------------------TCCTT--CHHHHHHHHHHTTCCGGGE
T ss_pred -----------------------heecccc------------------------CCCCC--CHHHHHHHHHHcCCCccce
Confidence 1111000 00112 22222222222 33689
Q ss_pred EEEcCCc-cCHHHHHhCceeEEEc--CcchhhHhHhcceecccccccchh
Q 002398 854 LAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 854 l~iGDG~-ND~~ml~~AdvGIa~~--g~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
++|||+. ||+.|.+.|++++++- +......+..+|+++.++..|..+
T Consensus 179 ~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 179 LHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp EEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred EEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 9999999 9999999999999882 222222344688888877766555
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=4.8e-05 Score=77.00 Aligned_cols=118 Identities=14% Similarity=0.092 Sum_probs=80.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.++++.|++ |+++.++|+.+...+..+.+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 577999999999999 99999999998888888888888753211
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeEEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 856 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~vl~i 856 (928)
.++++.-.++-|..+.+.+.++.| ..+++|
T Consensus 128 -----------------------------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 128 -----------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp -----------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred -----------------------------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 123333122345555554443343 579999
Q ss_pred cCCccCHHHHHhCce---eEEEcCcchhhHh-Hhcceecccccccchh
Q 002398 857 GDGANDVGMLQEADI---GVGISGVEGMQAV-MSSDIAIAQFRFLERL 900 (928)
Q Consensus 857 GDG~ND~~ml~~Adv---GIa~~g~~~~~a~-~~aD~vi~~f~~l~~l 900 (928)
||+.||+.|.+.|++ +|++........+ ..+|+++.++..|..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999999999 4443222122222 3589998877665443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.76 E-value=2.6e-05 Score=81.21 Aligned_cols=52 Identities=15% Similarity=0.200 Sum_probs=39.6
Q ss_pred CeEEEEcCCccCHHHHHhCceeEEE--cCcchhhHhHhcceecccccccchhhh
Q 002398 851 STTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRFLERLLL 902 (928)
Q Consensus 851 ~~vl~iGDG~ND~~ml~~AdvGIa~--~g~~~~~a~~~aD~vi~~f~~l~~lll 902 (928)
..+++|||+.||+.|.+.|++.+.+ .+......+..||+++.++.-|..+|+
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~ 244 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELF 244 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHh
Confidence 6899999999999999999965433 133223367899999999888766643
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0001 Score=76.12 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=36.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46799999999999999999999999988888888888874
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2.4e-05 Score=82.00 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=38.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.-++.+++.++++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 3456899999999999999999999999998888888888774
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00027 Score=75.35 Aligned_cols=59 Identities=22% Similarity=0.239 Sum_probs=46.6
Q ss_pred ccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 836 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 836 ~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
..|...++.+.+..| ..+++|||+.||++|++.|++||+|.+ .....+..||+++.+..
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~-~~~~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKN-ATQEAKNLHNLITDSEY 271 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTT-CCHHHHHHCCCBCSSCH
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECC-ccHHHHHhCCEEcCCCC
Confidence 368887777765433 579999999999999999999999954 34447888999887643
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00011 Score=75.35 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=82.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-.+.+++.++++.|++. +++.++|+.....+....+.+|+...-..+
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 148 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI-------------------------------- 148 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE--------------------------------
Confidence 35789999999999999 999999999998888888888875321111
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecC--cccHHHHHHHHhhcCC----Ce
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKTS----ST 852 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~s--p~qK~~iV~~l~~~~~----~~ 852 (928)
+.+... .+-|..+++.+.+..| ..
T Consensus 149 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 149 --------------------------------------------------FVSEDTGFQKPMKEYFNYVFERIPQFSAEH 178 (238)
T ss_dssp --------------------------------------------------EEGGGTTSCTTCHHHHHHHHHTSTTCCGGG
T ss_pred --------------------------------------------------EEecccCCCCCChHHHHHHHHHcCCCChhH
Confidence 111111 1112333333332233 57
Q ss_pred EEEEcCCc-cCHHHHHhCceeE-EEc-CcchhhHhHhcceecccccccchhh
Q 002398 853 TLAIGDGA-NDVGMLQEADIGV-GIS-GVEGMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 853 vl~iGDG~-ND~~ml~~AdvGI-a~~-g~~~~~a~~~aD~vi~~f~~l~~ll 901 (928)
+++|||+. ||+.|.+.|+++. .+. +......+..+|+++.++..|..+|
T Consensus 179 ~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 179 TLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred eEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 99999998 9999999999964 442 2222235668999999988887774
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.68 E-value=4.5e-05 Score=78.17 Aligned_cols=121 Identities=15% Similarity=0.126 Sum_probs=80.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
.+.+++.+.++.|++. +++.++|+.....+..+.+.+|+...-..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 144 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS---------------------------------- 144 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce----------------------------------
Confidence 4679999999999999 99999999999888888888887432111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCccc--HHHHHHHHhhcCCCeEEEEc
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ--KALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~q--K~~iV~~l~~~~~~~vl~iG 857 (928)
++.++.. ....|.- -..+.+.+.- ....+++||
T Consensus 145 --------------------~~~~~~~------------------------~~~kp~~~~~~~~~~~~~~-~~~~~~~vG 179 (234)
T 3u26_A 145 --------------------ITTSEEA------------------------GFFKPHPRIFELALKKAGV-KGEEAVYVG 179 (234)
T ss_dssp --------------------EEEHHHH------------------------TBCTTSHHHHHHHHHHHTC-CGGGEEEEE
T ss_pred --------------------eEecccc------------------------CCCCcCHHHHHHHHHHcCC-CchhEEEEc
Confidence 1111000 0011211 1123333322 346899999
Q ss_pred CCc-cCHHHHHhCce---eEEEcCcchhhHhHhcceecccccccchhh
Q 002398 858 DGA-NDVGMLQEADI---GVGISGVEGMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 858 DG~-ND~~ml~~Adv---GIa~~g~~~~~a~~~aD~vi~~f~~l~~ll 901 (928)
|+. ||+.|.+.|++ +|++. ......+..||+++.++.-|..+|
T Consensus 180 D~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 180 DNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp SCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESSTHHHHHHH
T ss_pred CCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCCHHHHHHHH
Confidence 997 99999999995 55543 333335568999999887776663
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.68 E-value=3.5e-05 Score=79.04 Aligned_cols=122 Identities=14% Similarity=0.093 Sum_probs=80.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 142 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLL-------------------------------- 142 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEE--------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEE--------------------------------
Confidence 578999999999999999999999999988888888888753211111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCccc--HHHHHHHHhhcCCCeEEEEc
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ--KALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~q--K~~iV~~l~~~~~~~vl~iG 857 (928)
.++... ...|.- -..+.+.+.- ....+++||
T Consensus 143 ----------------------~~~~~~------------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~iG 175 (232)
T 1zrn_A 143 ----------------------SVDPVQ------------------------VYKPDNRVYELAEQALGL-DRSAILFVA 175 (232)
T ss_dssp ----------------------ESGGGT------------------------CCTTSHHHHHHHHHHHTS-CGGGEEEEE
T ss_pred ----------------------EecccC------------------------CCCCCHHHHHHHHHHcCC-CcccEEEEe
Confidence 000000 011211 1123333332 346799999
Q ss_pred CCccCHHHHHhCceeEEEcCcc---hhhHhHhcceecccccccchh
Q 002398 858 DGANDVGMLQEADIGVGISGVE---GMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 858 DG~ND~~ml~~AdvGIa~~g~~---~~~a~~~aD~vi~~f~~l~~l 900 (928)
|+.||+.|.+.|++++.+-... ....+..+|+++.++..+..+
T Consensus 176 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 176 SNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp SCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred CCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 9999999999999998772211 111345689998887666555
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=4e-05 Score=79.20 Aligned_cols=42 Identities=24% Similarity=0.177 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.+++.++++.|++.|++++++|+.....+..+.+.+|+..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~ 146 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR 146 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH
Confidence 578999999999999999999999999998888888888753
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.65 E-value=8.9e-05 Score=76.66 Aligned_cols=41 Identities=20% Similarity=0.117 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|+++.++|+.+...+..+.+.+|+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 46799999999999999999999999888888777777763
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.63 E-value=4.4e-05 Score=78.98 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=31.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.++.+++.++++.|++.|++++++|+.....+...... |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887766666555 553
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.62 E-value=4.1e-05 Score=79.27 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=33.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
-++.+++.+.++.|++.|+++.++|+.....+...... |+.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 148 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP 148 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH
Confidence 46789999999999999999999999887766666555 553
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.59 E-value=7e-05 Score=76.90 Aligned_cols=118 Identities=17% Similarity=0.127 Sum_probs=82.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|+ .|++++++|+.....+....+.+|+...-..+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 152 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--------------------------------- 152 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE---------------------------------
Confidence 56799999999999 99999999999888888888887774321111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecC--cccHHHHHHHHhhcC---CCeEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKT---SSTTL 854 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~s--p~qK~~iV~~l~~~~---~~~vl 854 (928)
+++... .+-|..+++.+.+.. ...++
T Consensus 153 -------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 153 -------------------------------------------------ILSEDLGVLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp -------------------------------------------------EEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred -------------------------------------------------EEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 111111 112233333332223 36899
Q ss_pred EEcCCc-cCHHHHHhCceeEEEcCcch-hhHhHhcceecccccccchh
Q 002398 855 AIGDGA-NDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 855 ~iGDG~-ND~~ml~~AdvGIa~~g~~~-~~a~~~aD~vi~~f~~l~~l 900 (928)
+|||+. ||+.|.+.|++++++.+... ......+|+++.++.-+..+
T Consensus 184 ~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred EECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 999995 99999999999998844332 12456799999988877666
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00021 Score=72.34 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=37.2
Q ss_pred CCCeEEEEcCCccCHHHHHhCcee--EEEc-Ccch-hhHhHhcceecccccccchh
Q 002398 849 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~AdvG--Ia~~-g~~~-~~a~~~aD~vi~~f~~l~~l 900 (928)
....++||||+.||+.|.+.|++. |++. |... ......+|+++.++..|..+
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 346799999999999999999975 4552 3211 11234689999887777665
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00016 Score=71.74 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC-hhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~-~~ta~~ia~~~gi~ 740 (928)
++.+++.++|+.|++.|++++++||.+ ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999999 68899998888874
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00016 Score=73.60 Aligned_cols=52 Identities=12% Similarity=0.269 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCccCHHHHHhCcee-EEEcCcch------hhHhHh-cceecccccccchh
Q 002398 849 TSSTTLAIGDGANDVGMLQEADIG-VGISGVEG------MQAVMS-SDIAIAQFRFLERL 900 (928)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~AdvG-Ia~~g~~~------~~a~~~-aD~vi~~f~~l~~l 900 (928)
....+++|||+.||+.|++.|+++ |++..... ...+.. ||+++.+...+..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 346899999999999999999998 66643322 124555 99999887766554
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.44 E-value=8.9e-05 Score=76.84 Aligned_cols=121 Identities=8% Similarity=0.002 Sum_probs=82.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- +..
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f--------~~~--------------------------- 159 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW--------DVI--------------------------- 159 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC--------SCC---------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe--------eEE---------------------------
Confidence 5679999999999997 9999999999988888888887731 000
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC---CeEEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 856 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~---~~vl~i 856 (928)
+.++ .+....| |..+++.+.++.| ..+++|
T Consensus 160 ---------------------~~~~------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 160 ---------------------IGSD------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp ---------------------CCHH------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred ---------------------EEcC------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 0000 0001112 2333333333233 689999
Q ss_pred cCCccCHHHHHhCceeEEEcCcchh-------h--HhHhcceecccccccchhhhc
Q 002398 857 GDGANDVGMLQEADIGVGISGVEGM-------Q--AVMSSDIAIAQFRFLERLLLV 903 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGIa~~g~~~~-------~--a~~~aD~vi~~f~~l~~lll~ 903 (928)
||+.||+.|.+.|++++++-..... . ....+|+++.++..|..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 9999999999999999988542110 0 246789999998888777443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00049 Score=71.41 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=34.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+.+++.++++.|+ .|++++++|+.....+......+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56899999999999 99999999999888777777777664
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00016 Score=75.28 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=36.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.+++.++++.|+ |+++.++|+.+...+..+.+.+|+..
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~ 132 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchh
Confidence 67899999999999 99999999999998888888888753
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00024 Score=75.20 Aligned_cols=41 Identities=15% Similarity=-0.085 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~a-GI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4579999999999999 9999999999988888887777763
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00037 Score=68.69 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=32.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
+.+++.+.++.|++.|++++++|+... .+......+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~ 121 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 121 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCH
Confidence 679999999999999999999998864 556666666663
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00025 Score=70.87 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=35.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
-++.+++.+ ++.|++. +++.++|+.+...+..+.+.+|+..
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~ 113 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLR 113 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHH
Confidence 356799999 9999999 9999999999988888888888753
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00011 Score=76.28 Aligned_cols=118 Identities=10% Similarity=0.030 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|++. ++++++|+.....+..+.+.+|+.- + .
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f-~-~---------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW-D-M---------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC-S-E----------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc-c-e----------------------------------
Confidence 5678999999999985 9999999999888888888887730 0 0
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CCCeEEEE
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 856 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~~~vl~i 856 (928)
++.++. + -..+-|..+++.+.++ ....|++|
T Consensus 163 --------------------~~~~~~-----------------------~---~~~kp~~~~~~~~~~~lgi~~~~~~~i 196 (254)
T 3umc_A 163 --------------------LLCADL-----------------------F---GHYKPDPQVYLGACRLLDLPPQEVMLC 196 (254)
T ss_dssp --------------------ECCHHH-----------------------H---TCCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEeecc-----------------------c---ccCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 000000 0 0112233333333222 34689999
Q ss_pred cCCccCHHHHHhCceeEEEcCcc---h----hh--HhHhcceecccccccchh
Q 002398 857 GDGANDVGMLQEADIGVGISGVE---G----MQ--AVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGIa~~g~~---~----~~--a~~~aD~vi~~f~~l~~l 900 (928)
||+.||+.|.+.|+++++|.+.. + .. .+..+|+++.++.-|..+
T Consensus 197 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~ 249 (254)
T 3umc_A 197 AAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQ 249 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHH
T ss_pred cCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHH
Confidence 99999999999999999885411 1 11 156789999988877666
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00021 Score=75.08 Aligned_cols=122 Identities=11% Similarity=0.070 Sum_probs=79.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.+++.++++.|++.|+++.++|+... .+..+.+.+|+...-..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~---------------------------------- 150 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF---------------------------------- 150 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE----------------------------------
Confidence 4779999999999999999999999665 45777777887431111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCccc--HHHHHHHHhhcCCCeEEEEc
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ--KALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~q--K~~iV~~l~~~~~~~vl~iG 857 (928)
++.+... ....|.- -..+++.+.- ....+++||
T Consensus 151 --------------------~~~~~~~------------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vG 185 (263)
T 3k1z_A 151 --------------------VLTSEAA------------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVG 185 (263)
T ss_dssp --------------------EEEHHHH------------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEE
T ss_pred --------------------EEeeccc------------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEEC
Confidence 1111000 0011211 1223333332 346899999
Q ss_pred CCc-cCHHHHHhCceeEEEcCcch--hh---HhHhcceecccccccchhh
Q 002398 858 DGA-NDVGMLQEADIGVGISGVEG--MQ---AVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 858 DG~-ND~~ml~~AdvGIa~~g~~~--~~---a~~~aD~vi~~f~~l~~ll 901 (928)
|+. ||+.|.+.|++++.+..... .. ....+|+++.++.-|..+|
T Consensus 186 D~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 186 DNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp SCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 997 99999999999997743321 11 1236999999988877764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0011 Score=69.65 Aligned_cols=44 Identities=9% Similarity=0.089 Sum_probs=36.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcC---CChhHHHHHHHHcCcccC
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLLRQ 742 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 742 (928)
+.+-++++++|++|+++|++++++|| ++.........++|+...
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44556899999999999999999988 677777777888888543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0045 Score=64.50 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=36.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCcc
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlT---GD~~~ta~~ia~~~gi~ 740 (928)
+-+.+.++++.|++.|++++++| |++...+.....++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99999888888888874
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00024 Score=72.70 Aligned_cols=51 Identities=8% Similarity=-0.038 Sum_probs=39.4
Q ss_pred CCeEEEEcCCc-cCHHHHHhCceeEEEcCcc----------hhhHhHhcceecccccccchh
Q 002398 850 SSTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 850 ~~~vl~iGDG~-ND~~ml~~AdvGIa~~g~~----------~~~a~~~aD~vi~~f~~l~~l 900 (928)
...+++|||+. ||+.|.+.|++++++-... .......+|+++.++..|..+
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 172 KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 46899999996 9999999999999884322 112347899999887776665
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0021 Score=63.57 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCh---hHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKM---ETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~---~ta~~ia~~~gi~~ 741 (928)
++.+++.++++.|+++|++++++|+... ..+..+.+.+|+..
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~ 78 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID 78 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh
Confidence 6889999999999999999999998876 78888888888853
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.001 Score=69.90 Aligned_cols=50 Identities=12% Similarity=-0.016 Sum_probs=39.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CChhHHHHHHHHcCcccCCceEE
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLLRQGMRQV 747 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~~~~~~ 747 (928)
.+.+-++++++|++|+++|++++++|| ++..........+|+......++
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii 74 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEIL 74 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHee
Confidence 455667899999999999999999999 67777777778888854333333
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00026 Score=72.09 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=34.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCh---------------hHHHHHHHHcCc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKM---------------ETAINIGFACSL 739 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~---------------~ta~~ia~~~gi 739 (928)
.++.+++.++|+.|++.|++++++|+... ..+..+.+.+|+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999987 455566666665
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0026 Score=62.47 Aligned_cols=53 Identities=21% Similarity=0.297 Sum_probs=36.2
Q ss_pred EEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHH
Q 002398 605 LLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEK 684 (928)
Q Consensus 605 l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ 684 (928)
.+.-|..+-|.+ .+-.+.+.....+..+..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~----~gi~i~~~~~~~~~~~~~~G~T~V~va------------------------------------- 171 (185)
T 2kmv_A 133 KVLIGNREWMIR----NGLVINNDVNDFMTEHERKGRTAVLVA------------------------------------- 171 (185)
T ss_dssp EEEEECHHHHHH----HTCCCCHHHHHHHHHHHHTTCEEEEEE-------------------------------------
T ss_pred EEEECCHHHHHH----cCCCCCHHHHHHHHHHHhCCCeEEEEE-------------------------------------
Confidence 344587665533 221222344556777888999999988
Q ss_pred HhccceEeeeeecccc
Q 002398 685 IEKNLILLGATAVEDK 700 (928)
Q Consensus 685 ie~dl~llG~~~i~D~ 700 (928)
.|..++|++++.|+
T Consensus 172 --idg~l~g~iavaD~ 185 (185)
T 2kmv_A 172 --VDDELCGLIAIADT 185 (185)
T ss_dssp --ETTEEEEEEEEECC
T ss_pred --ECCEEEEEEEEEcC
Confidence 67789999999985
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0016 Score=66.90 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=33.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlT---GD~~~ta~~ia~~~gi~ 740 (928)
++.-+.+.++++.|++.|++++++| |++...........|+.
T Consensus 18 ~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 3444555889999999999999999 88888777777777763
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00077 Score=67.06 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=35.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.| +++++|+.+...+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999998888888888874
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0016 Score=66.23 Aligned_cols=53 Identities=21% Similarity=0.231 Sum_probs=39.3
Q ss_pred CCCeEEEEcCCc-cCHHHHHhCceeEEEcC--cchhhHhHhcceecccccccchhh
Q 002398 849 TSSTTLAIGDGA-NDVGMLQEADIGVGISG--VEGMQAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 849 ~~~~vl~iGDG~-ND~~ml~~AdvGIa~~g--~~~~~a~~~aD~vi~~f~~l~~ll 901 (928)
....+++|||+. ||+.|.+.|++++.+-. .........+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 346899999998 99999999999986622 211111557899999888776663
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0099 Score=62.11 Aligned_cols=47 Identities=13% Similarity=0.112 Sum_probs=39.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCcccCCceEE
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLLRQGMRQV 747 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlT---GD~~~ta~~ia~~~gi~~~~~~~~ 747 (928)
.+ ++++++|++|+++|++++++| |+.........+++|+......++
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii 71 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIY 71 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEE
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhee
Confidence 45 899999999999999999999 888888888889999854433333
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0067 Score=63.53 Aligned_cols=50 Identities=12% Similarity=0.057 Sum_probs=41.6
Q ss_pred cceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCccc
Q 002398 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLLR 741 (928)
Q Consensus 688 dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlT---GD~~~ta~~ia~~~gi~~ 741 (928)
|.||+- ..++-+++.++|++|++.|++++++| |+.........+.+|+..
T Consensus 25 DGTLl~----~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 25 DGTFYL----DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp BTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred cCcEEe----CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 555553 36677999999999999999999999 899888888888888743
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00078 Score=67.62 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=31.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 736 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~ 736 (928)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999888777766655
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0033 Score=65.68 Aligned_cols=41 Identities=22% Similarity=0.281 Sum_probs=36.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.|++.++++.|++ ++++.++|+.+...+..+...+|+..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 161 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 161 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHh
Confidence 577999999999998 59999999999988888888888753
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0043 Score=62.40 Aligned_cols=42 Identities=24% Similarity=0.192 Sum_probs=38.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 457999999999999999999999999999999999998864
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0056 Score=60.92 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=30.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia 734 (928)
++.+++.++++.|++.|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999999887764443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.00091 Score=61.92 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=35.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.++.|++.++++.|++.|++++++|+.+...+..+.+.+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 346788999999999999999999999988877777777663
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.00067 Score=67.77 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=26.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETA 730 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta 730 (928)
++.+++.++++.|++.|++++++|+.....+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~ 121 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 121 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHH
Confidence 5679999999999999999999999765443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0083 Score=61.89 Aligned_cols=43 Identities=7% Similarity=0.099 Sum_probs=36.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChh----HHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~----ta~~ia~~~gi~ 740 (928)
+.++.|++.+.|+.|++.|+++.++||++.. .+..-.+++||.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4678999999999999999999999999764 666666777874
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.011 Score=61.26 Aligned_cols=116 Identities=15% Similarity=0.254 Sum_probs=76.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
..++.|++.+.++.|++.|+++.+.|+.+ .+..+.+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999887654 45666777787532111
Q ss_pred HHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccH--HHHHHHHhhcCCCeEEE
Q 002398 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK--ALVTRLVKTKTSSTTLA 855 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK--~~iV~~l~~~~~~~vl~ 855 (928)
+++++.. .+..|.-. ..+++.+.- ....+++
T Consensus 160 ----------------------i~~~~~~------------------------~~~KP~p~~~~~a~~~lg~-~p~e~l~ 192 (250)
T 4gib_A 160 ----------------------IADAGKC------------------------KNNKPHPEIFLMSAKGLNV-NPQNCIG 192 (250)
T ss_dssp ----------------------ECCGGGC------------------------CSCTTSSHHHHHHHHHHTC-CGGGEEE
T ss_pred ----------------------eeccccc------------------------CCCCCcHHHHHHHHHHhCC-ChHHeEE
Confidence 1111100 11123222 233444432 4568999
Q ss_pred EcCCccCHHHHHhCce-eEEEcCcchhhHhHhcceeccccccc
Q 002398 856 IGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFL 897 (928)
Q Consensus 856 iGDG~ND~~ml~~Adv-GIa~~g~~~~~a~~~aD~vi~~f~~l 897 (928)
|||..+|+.+-+.|++ .|++.+.+. ...||+++.++.-|
T Consensus 193 VGDs~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 193 IEDASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp EESSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred ECCCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 9999999999999998 567754443 34689999887765
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.90 E-value=0.021 Score=62.87 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=38.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.||+.++++.|+++|+++.++|+.+...+..+.+.+|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999998888888854
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.096 Score=55.82 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=36.7
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCcc
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlT---GD~~~ta~~ia~~~gi~ 740 (928)
-.+++-+++.++|++|++.|++++++| |+.........+.+|+.
T Consensus 34 ~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 34 NGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 356677899999999999999999999 57777777777777774
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.05 Score=55.24 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=36.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
-++.|++.++++.|++.| ++.++|+.+...+..+.+.+|+.
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~ 135 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLW 135 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcH
Confidence 368999999999999999 99999999988888888888774
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0091 Score=64.30 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=37.3
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
+...+.+++.+.|+.|+++|++|||+||-....+..+|..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 33467899999999999999999999999999999999875
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.016 Score=59.92 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=36.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChh----HHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~----ta~~ia~~~gi~ 740 (928)
+.++.|++.+.++.|++.|+++.++||++.. .+..-.+.+||.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 4788999999999999999999999999763 555556677775
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.50 E-value=0.0062 Score=61.94 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=30.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 734 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia 734 (928)
++.+++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4668999999999999 999999999988877665
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.40 E-value=0.096 Score=53.93 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=31.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlT---GD~~~ta~~ia~~~gi~ 740 (928)
.+++-+++.++++.|++.|++++++| |............+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555789999999999999999999 55555555555666764
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.0098 Score=58.00 Aligned_cols=41 Identities=24% Similarity=0.257 Sum_probs=34.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC---------------ChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGD---------------KMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD---------------~~~ta~~ia~~~gi~ 740 (928)
++.|++.++|+.|++.|++++++|+- ....+..+.+.+|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 455666777777763
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.021 Score=59.32 Aligned_cols=43 Identities=12% Similarity=0.161 Sum_probs=34.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChh---HHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME---TAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~---ta~~ia~~~gi~ 740 (928)
+.++-|++.++|+.|++.|+++.++||++.. .+......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3567899999999999999999999999854 344444566764
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.019 Score=61.25 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=29.2
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhH
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~t 729 (928)
.++++.+++.++++.|++.|+++.++||.+...
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 356789999999999999999999999998643
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=94.75 E-value=0.079 Score=50.84 Aligned_cols=16 Identities=25% Similarity=0.202 Sum_probs=14.0
Q ss_pred ecCccHHHHHHHHHHC
Q 002398 533 AESPDEAAFVIAAREL 548 (928)
Q Consensus 533 ~~~p~e~alv~~a~~~ 548 (928)
++||...|++++++..
T Consensus 36 SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 36 SEHPLGVAVTKYCKEE 51 (165)
T ss_dssp SCSTTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHh
Confidence 5799999999999764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.55 E-value=0.019 Score=57.87 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=34.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+++.++++.|++.|++++++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999866 467777777764
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.04 E-value=0.1 Score=54.17 Aligned_cols=39 Identities=15% Similarity=0.225 Sum_probs=33.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
-++.+++.++++.|+++|+++.++|.-+...+..+-+.+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999888777665543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.04 E-value=0.92 Score=46.79 Aligned_cols=43 Identities=23% Similarity=0.218 Sum_probs=35.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH---cCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA---CSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~---~gi~ 740 (928)
.+..-+++.++|++|++.|++++++||+...+...+++. +|+.
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344448999999999999999999999998777777665 4663
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=91.99 E-value=0.14 Score=47.53 Aligned_cols=40 Identities=20% Similarity=0.066 Sum_probs=34.1
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCC---hhHHHHHHHHcCcc
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSLL 740 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~---~~ta~~ia~~~gi~ 740 (928)
+-+++.++|++|+++|++++++||++ ...+...+.+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 56677777788773
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.40 E-value=0.3 Score=49.91 Aligned_cols=41 Identities=17% Similarity=0.095 Sum_probs=32.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
.++.|++.+.++.|++.|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 45789999999999999999999998654 445566777753
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=91.27 E-value=0.12 Score=51.75 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=25.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhH
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMET 729 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~t 729 (928)
+.+++.++++.|++.|+++.++|+.+...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999997643
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=88.79 E-value=0.42 Score=49.31 Aligned_cols=43 Identities=5% Similarity=0.138 Sum_probs=34.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH----cCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA----CSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~----~gi~ 740 (928)
.++.-+++.++++.|++.|+++.++||+...+...++.. +|+.
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 344447888999999999999999999998777777664 7764
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=86.87 E-value=0.7 Score=51.46 Aligned_cols=26 Identities=31% Similarity=0.498 Sum_probs=24.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCC
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDK 726 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~ 726 (928)
+-+++.++|+.|+++|+++.++|+.+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=80.22 E-value=0.58 Score=53.68 Aligned_cols=26 Identities=19% Similarity=0.232 Sum_probs=24.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD 725 (928)
++.+++.++++.|++.|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 928 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-29 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 5e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 9e-14 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-06 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 6e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 8e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.001 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 0.003 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 116 bits (290), Expect = 1e-29
Identities = 39/230 (16%), Positives = 70/230 (30%), Gaps = 35/230 (15%)
Query: 483 GFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFV 542
+ E E + N + D + + + A+C+ + + +E G E A
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86
Query: 543 IAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT 602
++ E ++S E + + + LEFS RK MSV + +
Sbjct: 87 TLVEKMNVFNTEV--RNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
Query: 603 -----LLLLSKGADSVMFER-----LAENGREFEEQTKEHINE------YADAGLRTLIL 646
+ KGA + +R + KE I LR L L
Sbjct: 145 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 647 AYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 696
A R+ K + ++ + E +L +G
Sbjct: 205 ATRDTPPKREEMVLDD----------------SSRFMEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 87.2 bits (215), Expect = 5e-20
Identities = 28/214 (13%), Positives = 63/214 (29%), Gaps = 46/214 (21%)
Query: 499 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE--SPDEAAFVIAARELGFEFYERT 556
+ + R+ +C+ A+ + +EN +S E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 557 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVM 614
K+ + + F+S+ K I E + +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 615 FERLA---------ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTE 665
+R + +E ++ + E G R L L ++ +
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPR------- 182
Query: 666 AKNSVSADREELAEEIAEKIEKNLILLGATAVED 699
+ + + L +G ++ D
Sbjct: 183 --------GFKFDTDELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 71.8 bits (175), Expect = 9e-14
Identities = 38/352 (10%), Positives = 81/352 (23%), Gaps = 91/352 (25%)
Query: 560 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLA 619
+ E + + + + L + + + + L + A + + A
Sbjct: 105 MYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 620 ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAE 679
K + A + L + ++ E K F
Sbjct: 165 T-----LFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF---------------- 203
Query: 680 EIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737
G E L+ V ++ L AG +L + TG +
Sbjct: 204 -----------KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL 252
Query: 738 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 797
LL I ++ ++ + + + P
Sbjct: 253 GLLPYFEADFIATA--------------------------SDVLEAENMYPQARPLGKPN 286
Query: 798 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 857
A++ + + + +G
Sbjct: 287 PFSY-----------------------IAALYGNNRDKYESYINKQDNIVNK-DDVFIVG 322
Query: 858 DGANDVGMLQEAD---IGV--GISGVEGMQAVMSS--DIAIAQFRFLERLLL 902
D D+ Q+ IG G+ G + + + D I L +L
Sbjct: 323 DSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 48.2 bits (114), Expect = 5e-07
Identities = 38/209 (18%), Positives = 61/209 (29%), Gaps = 58/209 (27%)
Query: 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747
+ T D + V I AGI++ ++TGD TAI I R++
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRI 57
Query: 748 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 807
I E E + ++ T
Sbjct: 58 GIFGENEE---------------------------------------------VADRAYT 72
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 867
DD+ A A + +V T GDG ND L+
Sbjct: 73 GREFDDLPLAEQREACRRACCFARVEPSHKSKIVEY--LQSYDEITAMTGDGVNDAPALK 130
Query: 868 EADIGVGISGVEGMQAVMSSDIAIAQFRF 896
+A+IG+ + A +S++ +A F
Sbjct: 131 KAEIGIAMGSGT-AVAKTASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 3e-06
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 824 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 883
G S + ++ L + + IGDGA D+ AD +G G Q
Sbjct: 141 GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQ 200
Query: 884 VM-SSDIAIAQFRFL 897
V ++ I F L
Sbjct: 201 VKDNAKWYITDFVEL 215
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 40.1 bits (92), Expect = 6e-04
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 853 TLAIGDGANDVGMLQEADIGVGISG 877
TL +GDG ND +L+ D V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 39.6 bits (91), Expect = 8e-04
Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 11/181 (6%)
Query: 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK 757
+ E I + GI + ++TG+ ++ A + + + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 758 TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 817
S D+ + D L+I +++ ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDR------RAGLVIMRETINVETVREIINE 130
Query: 818 FLELAIGCASVICCRSSPKQKALVTRLVKTK-----TSSTTLAIGDGANDVGMLQEADIG 872
+ S + + K +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 873 V 873
V
Sbjct: 191 V 191
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 39.3 bits (90), Expect = 0.001
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 808 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK--TSSTTLAIGDGANDVGM 865
E+ + + ++ +G +S K KA L K + A+GD ND M
Sbjct: 152 DGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPM 211
Query: 866 LQEADIGV 873
+ D
Sbjct: 212 FEVVDKVF 219
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 36.6 bits (84), Expect = 0.003
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 688 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKME 728
+ D L+ + +L + GIK+ ++TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 928 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.9 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.85 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.81 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.22 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.11 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.05 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.02 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.99 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.98 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.93 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.89 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.87 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.85 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.84 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.74 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.7 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.68 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.5 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.48 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.46 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.31 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.3 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.87 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.62 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.32 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.26 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.12 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.11 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.05 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.94 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.72 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.56 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.52 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.44 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.21 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.1 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.1 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.84 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.76 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.31 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.24 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.26 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.03 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.0 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.85 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 93.68 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.43 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 92.37 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 91.9 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 90.7 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 88.8 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 85.5 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.3 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 83.72 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 80.98 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=1.7e-27 Score=230.36 Aligned_cols=150 Identities=21% Similarity=0.299 Sum_probs=122.7
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhh
Q 002398 697 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 776 (928)
Q Consensus 697 i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (928)
.-||+|++++++|+.||++||++||+|||+..||.++|+++||+.++..+.
T Consensus 17 ~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~----------------------------- 67 (168)
T d1wpga2 17 QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA----------------------------- 67 (168)
T ss_dssp CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-----------------------------
T ss_pred ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-----------------------------
Confidence 339999999999999999999999999999999999999999987653210
Q ss_pred HHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEE
Q 002398 777 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~i 856 (928)
...++|..+......+..+.+... .+|+|++|+||..+|+.+++ .|++|+|+
T Consensus 68 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~------~v~ar~~p~~K~~lv~~l~~-~g~~Va~v 119 (168)
T d1wpga2 68 ---------------------DRAYTGREFDDLPLAEQREACRRA------CCFARVEPSHKSKIVEYLQS-YDEITAMT 119 (168)
T ss_dssp ---------------------TTEEEHHHHHHSCHHHHHHHHHHC------CEEESCCHHHHHHHHHHHHH-TTCCEEEE
T ss_pred ---------------------cccccccccchhhHHHHhhhhhhh------hhhhccchhHHHHHHHHHHh-cccceeEE
Confidence 014556666555544555544433 39999999999999999998 89999999
Q ss_pred cCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc--cchhhhcch
Q 002398 857 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHG 905 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~--l~~lll~~g 905 (928)
|||.||++||+.|||||+|. .....|+++||+++++.++ +..+ +.||
T Consensus 120 GDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 120 GDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp ECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred ecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHH-HHcC
Confidence 99999999999999999994 4445589999999998555 6666 6665
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=1.4e-24 Score=201.07 Aligned_cols=120 Identities=24% Similarity=0.310 Sum_probs=102.2
Q ss_pred ccceEeeeeeccccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHH
Q 002398 687 KNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKS 766 (928)
Q Consensus 687 ~dl~llG~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (928)
-|.+..+.++++|++|++++++|+.||++||++||+|||+.++|.++|++|||-.
T Consensus 8 ~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~------------------------- 62 (135)
T d2b8ea1 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------- 62 (135)
T ss_dssp EECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------------------
T ss_pred ECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh-------------------------
Confidence 4666778899999999999999999999999999999999999999999999831
Q ss_pred HHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHh
Q 002398 767 AAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVK 846 (928)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~ 846 (928)
++++++|++|..+|+.++
T Consensus 63 --------------------------------------------------------------v~~~~~p~~k~~~v~~~q 80 (135)
T d2b8ea1 63 --------------------------------------------------------------VIAEVLPHQKSEEVKKLQ 80 (135)
T ss_dssp --------------------------------------------------------------EECSCCHHHHHHHHHHHT
T ss_pred --------------------------------------------------------------hccccchhHHHHHHHHHH
Confidence 899999999999999997
Q ss_pred hcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccccc
Q 002398 847 TKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 847 ~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
. +..|+|+|||.||++||++|||||+|.+. ...++.+||+++++.++
T Consensus 81 ~--~~~v~~vGDg~nD~~aL~~Advgia~~~~-~~~~~~aADivl~~~~l 127 (135)
T d2b8ea1 81 A--KEVVAFVGDGINDAPALAQADLGIAVGSG-SDVAVESGDIVLIRDDL 127 (135)
T ss_dssp T--TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCT
T ss_pred c--CCEEEEEeCCCCcHHHHHhCCeeeecCcc-CHHHHHhCCEEEECCCH
Confidence 6 56999999999999999999999999543 34489999999998554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.90 E-value=3.5e-25 Score=224.97 Aligned_cols=171 Identities=16% Similarity=0.194 Sum_probs=124.3
Q ss_pred ChHHHHHHHHHHhhcceeeccccCCCCce--EEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEE
Q 002398 501 HADVIQKFLRLLAICHTALPEVDEENGKI--SYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYS 578 (928)
Q Consensus 501 ~~~~~~~~~~~l~lc~~~~~~~~~~~~~~--~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 578 (928)
..+.++.++.++++||++....+...... ....|+|.|.||+.+|...|..... .+..|.
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~ 91 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNP 91 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCc
Confidence 34567789999999999876543321110 0125899999999999987664322 135677
Q ss_pred EeeeecccCCCceEEEEEEeC--CCeEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHHHhccCeEEEEE
Q 002398 579 LLNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILA 647 (928)
Q Consensus 579 il~~~~F~s~rkrmsviv~~~--~g~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~~~~Glr~l~~A 647 (928)
++..+||+|.||||++|++.+ ++.+++|+|||||.|+++|+.. ++..++.+.+.+++|+.+|+|||++|
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 889999999999999999985 4678999999999999999742 34667889999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCCC
Q 002398 648 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 704 (928)
Q Consensus 648 ~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~~ 704 (928)
||+++.+++..|... +.+ ..+.+|+||+|+|++|++||+|+.
T Consensus 172 ~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFKF----------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCCC----------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCcccccccccc----------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999998876654221 110 124567899999999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.85 E-value=7.1e-27 Score=259.29 Aligned_cols=324 Identities=13% Similarity=0.049 Sum_probs=207.8
Q ss_pred hhhhccceeEEEecCCCcccccceEEEEEEEcCeecCCCccHHHHHHHHhcCCCCcccchhhhccccccCCCccCchhhh
Q 002398 413 LNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIM 492 (928)
Q Consensus 413 ~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (928)
..|.||...++|+|||||+|.|.|....+. .. ........
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~------~~---~il~~~k~------------------------------- 71 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQ------KD---KILNKLKS------------------------------- 71 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHT------TT---HHHHHHHH-------------------------------
T ss_pred chhhcccceeeecCcccchhhhhheeeeec------ch---hhhHhhhh-------------------------------
Confidence 348899999999999999999999763211 00 00000000
Q ss_pred cCCCCCCCChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcc
Q 002398 493 NGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTK 572 (928)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~ 572 (928)
...+ .. -++..+.++|+.+..... .+.|.+.+++..++..+..+..
T Consensus 72 --~g~n----~~-~dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~------------------ 117 (380)
T d1qyia_ 72 --LGLN----SN-WDMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQN------------------ 117 (380)
T ss_dssp --TTCC----CH-HHHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHTT------------------
T ss_pred --cCCC----hh-HHHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHHH------------------
Confidence 0000 01 134455666775432211 2467777777654322111100
Q ss_pred eeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcHHHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecC
Q 002398 573 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELD 652 (928)
Q Consensus 573 ~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~ 652 (928)
....+.....+||++.+|+|+++....++.+.++.||+++.+. . .......+...+..++.+|+|++++|++..+
T Consensus 118 ~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~-~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~ 192 (380)
T d1qyia_ 118 ISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----V-SDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192 (380)
T ss_dssp SGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----C-SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----C-cHHHHHHHHhHHHHHHHHHHHHHHHhhhccc
Confidence 1123344567899999999998776555555555666665442 1 1122344556778899999999998865432
Q ss_pred HHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeeccccCCC--ChHHHHHHHHHcCCeEEEEcCCChhHH
Q 002398 653 EKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDKMETA 730 (928)
Q Consensus 653 ~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i~D~lr~--~~~~~I~~Lk~aGI~v~mlTGD~~~ta 730 (928)
..+ .....+....|+++.+++++| +++++|+.|+++||+++|+|||+..+|
T Consensus 193 ~~~---------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a 245 (380)
T d1qyia_ 193 DVE---------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTET 245 (380)
T ss_dssp HHH---------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred ccc---------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 211 122345667799999999776 999999999999999999999999999
Q ss_pred HHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHh
Q 002398 731 INIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 810 (928)
Q Consensus 731 ~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l 810 (928)
..+++++||...-.... ++++.......
T Consensus 246 ~~il~~lgl~~~F~~~~----------------------------------------------------i~~~~d~~~~~ 273 (380)
T d1qyia_ 246 VVPFENLGLLPYFEADF----------------------------------------------------IATASDVLEAE 273 (380)
T ss_dssp HHHHHHHTCGGGSCGGG----------------------------------------------------EECHHHHHHHH
T ss_pred HHHHHHcCCcccCCcce----------------------------------------------------EEecchhhhhh
Confidence 99999999975211100 11111110000
Q ss_pred H---------HHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCc---eeEEEc--
Q 002398 811 E---------DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD---IGVGIS-- 876 (928)
Q Consensus 811 ~---------~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~Ad---vGIa~~-- 876 (928)
. ......+... ..++|.+|.+|..+++.++. .++.|+|+|||.||++|++.|| |||+|+
T Consensus 274 ~~~~~~~~~~KP~p~~~~~~------~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~ 346 (380)
T d1qyia_ 274 NMYPQARPLGKPNPFSYIAA------LYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346 (380)
T ss_dssp HHSTTSCCCCTTSTHHHHHH------HHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred hhccccccccCCChHHHHHH------HHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCC
Confidence 0 0001112221 16789999999999999987 7889999999999999999999 899873
Q ss_pred Ccchh--hHhHhcceecccccccchhh
Q 002398 877 GVEGM--QAVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 877 g~~~~--~a~~~aD~vi~~f~~l~~ll 901 (928)
|.+.. .....||+++.++..|.++|
T Consensus 347 g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 347 GKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp BGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 23321 12337999999988877664
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=7.4e-22 Score=203.94 Aligned_cols=178 Identities=21% Similarity=0.231 Sum_probs=127.0
Q ss_pred ChHHHHHHHHHHhhcceeeccccCCCCceEEEecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEe
Q 002398 501 HADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLL 580 (928)
Q Consensus 501 ~~~~~~~~~~~l~lc~~~~~~~~~~~~~~~y~~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il 580 (928)
..+.++.++.++++||++....++..+.. ...++|+|.||+.+|.+.|+.........- ...........+..|.++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSK--VERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCH--HHHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccch--hhhhccchhhhhhhCeEE
Confidence 34567889999999999877655444433 456899999999999998875433111000 000000001113578999
Q ss_pred eeecccCCCceEEEEEEeCCC-----eEEEEEecCcHHHHHHHhhc---------chhhHHHHHHHHHHH--HhccCeEE
Q 002398 581 NVLEFSSSRKRMSVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEY--ADAGLRTL 644 (928)
Q Consensus 581 ~~~~F~s~rkrmsviv~~~~g-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--~~~Glr~l 644 (928)
+.+||+|+|||||||++.+++ .+++|+|||||.|+++|+.. +...++.+.+.++.| +++|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998764 47899999999999999742 345667777778876 67999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEeeeeec
Q 002398 645 ILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 697 (928)
Q Consensus 645 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~llG~~~i 697 (928)
++|||+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999999865432211 011 013578999999999986
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=8.9e-21 Score=168.93 Aligned_cols=107 Identities=23% Similarity=0.259 Sum_probs=87.7
Q ss_pred eEEEEeCCCeE--EEEecccCccccEEEeccCCcCCccEEEEeecCCCceEEEEecCCCCCCcceeecccccccCCCCcc
Q 002398 139 KVKVHCGEGAF--DYTKWRDLKVGDVVKVEKDEFFPADLILLSSSYEEAICYVETTNLDGETNLKLKQALDATSNMHEDS 216 (928)
Q Consensus 139 ~~~v~~r~g~~--~~i~~~~L~vGDII~l~~ge~iPaD~vlL~~s~~~~~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~ 216 (928)
.++|+ |+|++ ++|++++|+|||||.|++|+.+||||+||.+.+. .++||||+||||+.|+.|.+.+....
T Consensus 2 ~~kV~-R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~--~l~vdes~lTGEs~pv~K~~~~~~~~----- 73 (115)
T d1wpga1 2 MGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKST--TLRVDQSILTGESVSVIKHTEPVPDP----- 73 (115)
T ss_dssp EEEEE-BSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSS--CCEEECHHHHSCCSCEECCCSCCCCT-----
T ss_pred ceEEE-ECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeecc--ceEEEEeecccceEEEEeeccccccc-----
Confidence 57899 99874 7899999999999999999999999999975432 28999999999999999987543210
Q ss_pred ccccCcEEEEEecCCCCcceEEEEEEEcCeeecCCCCcccccCceeecCCeEEEEEEEecCCcceee
Q 002398 217 NFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ 283 (928)
Q Consensus 217 ~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~l~rGs~l~~t~~~~g~Vv~tG~~Tk~~~ 283 (928)
.....+..|++|+||.+.+ |.++++|++||.+|.+++
T Consensus 74 -----------------------------~~~~~~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~G~ 110 (115)
T d1wpga1 74 -----------------------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGK 110 (115)
T ss_dssp -----------------------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHH
T ss_pred -----------------------------ccccccccceEEeccEEEe-eeEEEEEEEEccccHHHH
Confidence 1122346789999999986 889999999999996543
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.22 E-value=2.9e-12 Score=144.87 Aligned_cols=70 Identities=23% Similarity=0.107 Sum_probs=65.5
Q ss_pred HHHHHHHHHhhccccceehhHHHHHHHHHHHhhccccccccccCCCccccccchhhhccceeEEEecCC--CcccccceE
Q 002398 360 HFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKT--GTLTCNSME 437 (928)
Q Consensus 360 ~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~m~~~~~~~~i~~~~~~~~e~Lg~v~~i~~DKT--GTLT~n~m~ 437 (928)
.+..++.+.+.++|.+||+.++++.++++.+| +++++++|++.++|++|+..++|+||| +|||.|.+.
T Consensus 180 ~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~ 249 (472)
T d1wpga4 180 YFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGE 249 (472)
T ss_dssp HHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHH
Confidence 67788999999999999999999999999999 899999999999999999999999998 999999877
Q ss_pred EE
Q 002398 438 FI 439 (928)
Q Consensus 438 ~~ 439 (928)
+.
T Consensus 250 v~ 251 (472)
T d1wpga4 250 VV 251 (472)
T ss_dssp HH
T ss_pred HH
Confidence 63
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=1.7e-10 Score=120.40 Aligned_cols=192 Identities=13% Similarity=0.100 Sum_probs=109.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCc---------cccccchhhHHHHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE---------SKTLEKSEDKSAAAA 770 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 770 (928)
++.+.+.++|++|+++||+++++||++...+..+.+++++..+...++..+|.... ...+.. .....+..
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~-~~~~~i~~ 99 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSY-DDYRFLEK 99 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCH-HHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccH-HHHHHHHH
Confidence 47788999999999999999999999999999999999987766665554443211 011111 11112211
Q ss_pred HHHHhhHH-Hhhhh-------------------hhhc----cc----CCCCCCCeEEEEechhhHHHhHHHHHHHHHHHh
Q 002398 771 ALKASVLH-QLIRG-------------------KELL----DS----SNESLGPLALIIDGKSLTYALEDDVKDLFLELA 822 (928)
Q Consensus 771 ~~~~~~~~-~~~~~-------------------~~~~----~~----~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~ 822 (928)
........ ..... .... .. .........+.++...........+.+.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 11110000 00000 0000 00 000111233344433332222222223332211
Q ss_pred hcC-CeEEEEecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 823 IGC-ASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 823 ~~~-~~~v~~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
... ..-.+....|. +|+..++.+.+..+ ..+++||||.||++||+.|++||+|.+. ...++..||++...
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na-~~~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKS 255 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHHCSEECCC
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCC-CHHHHHhCCEEcCC
Confidence 000 00012334454 69999998877533 5699999999999999999999999544 45589999999875
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.05 E-value=4.8e-11 Score=120.99 Aligned_cols=181 Identities=12% Similarity=0.124 Sum_probs=98.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc----CCceEEEEeCCCCccccccchhhHHHHHHHHHHh
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 775 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (928)
.+.+.+.++|++|+++|++++++|||+...+...++.+++-. .+...+............ .... .+...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~--~~~~-~~~~~---- 91 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEW-ILWNE---- 91 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHH-HHHHH----
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccc--cHHH-HHHHH----
Confidence 577889999999999999999999999999999998887632 122222221111000000 0111 11111
Q ss_pred hHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcC-----CeEEEEecCcccHHHHHHHHhhcC-
Q 002398 776 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC-----ASVICCRSSPKQKALVTRLVKTKT- 849 (928)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~-----~~~v~~r~sp~qK~~iV~~l~~~~- 849 (928)
...........+.. ......+.+........ ...+....+.... ...+-.......|...++.+.+..
T Consensus 92 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 92 IRKRFPNARTSYTM---PDRRAGLVIMRETINVE---TVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp HHHHCTTCCBCTTG---GGCSSCEEECTTTSCHH---HHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHhcccccceeec---ccceeeEEEecccccHH---HHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccc
Confidence 11111110000000 01111122222222111 1111111111110 001111223457998888876543
Q ss_pred --CCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceecccc
Q 002398 850 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 894 (928)
Q Consensus 850 --~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f 894 (928)
...|++||||.||++||+.|++||+|.+. ...++..||+++...
T Consensus 166 i~~~~~~~iGD~~NDi~ml~~ag~~vav~na-~~~~k~~A~~v~~~~ 211 (230)
T d1wr8a_ 166 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQA-PKILKENADYVTKKE 211 (230)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHTTCSEECSSC
T ss_pred cchhheeeeecCccHHHHHHHCCeEEEECCC-CHHHHHhCCEEECCC
Confidence 36799999999999999999999999544 455999999998763
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.02 E-value=2.2e-10 Score=120.39 Aligned_cols=61 Identities=23% Similarity=0.287 Sum_probs=50.8
Q ss_pred ecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 832 r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
.++|. .|+..++.+.++.| ..|++||||.||.+||+.|+.||+|.+. ..+++..||++...
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na-~~~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLT 271 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTC-CHHHHHHCSEECCC
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCC-CHHHHHhCCEEcCC
Confidence 35555 79999998887655 5799999999999999999999999544 35589999999875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=3e-10 Score=118.28 Aligned_cols=64 Identities=19% Similarity=0.130 Sum_probs=51.8
Q ss_pred EecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 831 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 831 ~r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
..++|. .|+..++.|.++.| ..|++||||.||++||+.|+.||+|.++ ..+++..||+++....
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na-~~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDDNN 250 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTC-CHHHHHHCSEECCCGG
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCC-CHHHHHhCCEEcCCCC
Confidence 455665 69999988876544 5699999999999999999999999544 4558999999987633
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=4.9e-10 Score=112.64 Aligned_cols=130 Identities=19% Similarity=0.243 Sum_probs=93.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceE--EEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ--VIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
+++|++.++|+.||+.|++++|+||.....+.++++.+|+...+... +.+....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G------------------------ 137 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNG------------------------ 137 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTS------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehh------------------------
Confidence 47899999999999999999999999999999999999985321100 0000000
Q ss_pred HHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc-CCCeEEEE
Q 002398 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAI 856 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~-~~~~vl~i 856 (928)
. .+|... .-....+..|+.+++.++.. ....++++
T Consensus 138 ------------------~----~~g~~~----------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~v 173 (217)
T d1nnla_ 138 ------------------E----YAGFDE----------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMI 173 (217)
T ss_dssp ------------------C----EEEECT----------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEE
T ss_pred ------------------c----ccccee----------------------eeeeeccchHHHHHHHHHhccCccccEEE
Confidence 0 000000 00002356799999988763 23579999
Q ss_pred cCCccCHHHHHhCceeEEEcCcc-hhhHhHhcceeccccccc
Q 002398 857 GDGANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFL 897 (928)
Q Consensus 857 GDG~ND~~ml~~AdvGIa~~g~~-~~~a~~~aD~vi~~f~~l 897 (928)
|||.||++|++.||++||+.++. ..+.+..||+++.+|..|
T Consensus 174 GDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 174 GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp ESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred EeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 99999999999999999996543 345677899999887754
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.93 E-value=1.4e-09 Score=109.84 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=100.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCC------CCccccccchhhHHHHHHH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE------TPESKTLEKSEDKSAAAAA 771 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 771 (928)
+.++.+++.+++++|++.|++++++||++...+..++...|+-. .++..++. .............+.+...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEM 94 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHHHHHHHH
Confidence 45678899999999999999999999999999999998888632 22222221 1111111111111111111
Q ss_pred HHHhhHHHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEE-----EEecCc--ccHHHHHHH
Q 002398 772 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQKALVTRL 844 (928)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v-----~~r~sp--~qK~~iV~~ 844 (928)
... . ...................+......+. .........+ +....| ..|+..++.
T Consensus 95 ~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~ 158 (225)
T d1l6ra_ 95 SKR-T------SMRSILTNRWREASTGFDIDPEDVDYVR---------KEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK 158 (225)
T ss_dssp TTT-S------SCBCCGGGGGCSSSEEEBCCGGGHHHHH---------HHHHTTTEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred HHh-c------CcceeecccceeeeeccccCHHHHHHHH---------HHHhhcCcEEEECCcEEEecCCccchHHHHHH
Confidence 000 0 0000000011122223333333332221 1111111122 222334 379988887
Q ss_pred HhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 845 VKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 845 l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
+.+..+ ..|++||||.||++|++.|++||+|++. ...++..||+++....
T Consensus 159 l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na-~~~~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 159 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA-TDNIKAVSDFVSDYSY 211 (225)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTS-CHHHHHHCSEECSCCT
T ss_pred HhhhhccchhheeeecCCcchHHHHHHCCeEEEECCC-cHHHHHhCCEEECCCC
Confidence 765443 5699999999999999999999999544 3448999999876543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.89 E-value=6.3e-10 Score=115.73 Aligned_cols=63 Identities=24% Similarity=0.345 Sum_probs=51.1
Q ss_pred ecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 832 r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
.++|. .|+..++.+.++.+ ..|++||||.||++||+.|++||+|++. ...++..||+++...+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na-~~~~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNN 250 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTS-CHHHHHHCSEECCCTT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCC-CHHHHHhCCEEcCCCC
Confidence 45664 79999988876533 5699999999999999999999999543 4559999999987533
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.87 E-value=2.7e-09 Score=111.54 Aligned_cols=56 Identities=16% Similarity=0.228 Sum_probs=47.0
Q ss_pred cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 837 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 837 qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
.|+..++.+.+..+ ..|++||||.||.+||+.|++||+|+++ ...++..||+++..
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na-~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTC-CHHHHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCC-CHHHHHhCCEEECC
Confidence 69888888776543 6899999999999999999999999543 45599999999864
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.85 E-value=2.2e-09 Score=111.10 Aligned_cols=63 Identities=25% Similarity=0.361 Sum_probs=50.1
Q ss_pred ecCcc--cHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 832 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 832 r~sp~--qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
.+.|. .|+..++.+.++.+ ..+++||||.||++||+.|+.||+|.+. ...++..||++.....
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na-~~~lk~~A~~vt~~~~ 246 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYVTAPID 246 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS-CHHHHHHSSEECCCGG
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCC-CHHHHHhCCEEeCCCC
Confidence 34454 69999988876533 6799999999999999999999999544 3448999999877533
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.84 E-value=3e-09 Score=102.13 Aligned_cols=113 Identities=17% Similarity=0.154 Sum_probs=84.5
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHhhhhhhh
Q 002398 707 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 786 (928)
Q Consensus 707 ~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (928)
..|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999888742
Q ss_pred cccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CCCeEEEEcCCccCH
Q 002398 787 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDV 863 (928)
Q Consensus 787 ~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~~~vl~iGDG~ND~ 863 (928)
++. ....|...++.+.+. ....|+++||+.||.
T Consensus 74 ------------------------------------------~~~--~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 ------------------------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp ------------------------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------ccc--ccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 111 233455555544332 347899999999999
Q ss_pred HHHHhCceeEEEcCcchhhHhHhcceeccc------ccccchh-hhcchhhhH
Q 002398 864 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERL-LLVHGHWCY 909 (928)
Q Consensus 864 ~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~------f~~l~~l-ll~~gr~~~ 909 (928)
+||+.|++|+++.++ ...++..||||+.. .+-+..+ |-..|+|.+
T Consensus 110 ~~l~~~g~siap~nA-~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 110 PAFAACGTSFAVADA-PIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHHHSSEEEECTTS-CHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHhhCCeEEEcCCc-cHHHHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 999999999999554 44599999999986 2224444 345677654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.74 E-value=3.6e-08 Score=99.19 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi 739 (928)
.+.+.+.++|++|+++|+.++++|||+...+..+.+++++
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhcc
Confidence 4788999999999999999999999999999999999986
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.70 E-value=5.1e-08 Score=96.05 Aligned_cols=128 Identities=19% Similarity=0.132 Sum_probs=88.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
+..++....++.+ +.+.+++++|+.........+...++.......+......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4566777777766 5789999999999999999998888764322222111110
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcCC
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 859 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGDG 859 (928)
.........+.-+...++.++. ..+.|+|||||
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg 154 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEecCC
Confidence 1112333344445566777765 77899999999
Q ss_pred ccCHHHHHhCceeEEEcCcchhhHhHhcceeccc-ccccchhhh
Q 002398 860 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ-FRFLERLLL 902 (928)
Q Consensus 860 ~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~-f~~l~~lll 902 (928)
.||++||+.||+|||| ++.....++++||+... +.-|.+.|+
T Consensus 155 ~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~ 197 (206)
T d1rkua_ 155 YNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp STTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred ccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHH
Confidence 9999999999999999 55555467788997654 555666544
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.68 E-value=1.4e-08 Score=103.17 Aligned_cols=43 Identities=7% Similarity=0.008 Sum_probs=39.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.+...+.++++|++|+++|++++++|||+...+..+.+++++.
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4556788999999999999999999999999999999999863
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.50 E-value=1.1e-07 Score=95.45 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=82.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCce-EEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR-QVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
+++|++.+.++.|++.|+++.++||-....+..+.+.+|+...-.. .+.+.+....
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~----------------------- 131 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH----------------------- 131 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE-----------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcce-----------------------
Confidence 4789999999999999999999999999999999999987532100 0111111000
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcC
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGD 858 (928)
..+... ....++...|..|..+++.++. .+..|++|||
T Consensus 132 ----------------------~~~~~~-------------------~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGD 169 (226)
T d2feaa1 132 ----------------------IDWPHS-------------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGD 169 (226)
T ss_dssp ----------------------EECTTC-------------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEEC
T ss_pred ----------------------eccccc-------------------cccccccCCHHHHHHHHHHhcC-CCceEEEEeC
Confidence 000000 0003345678889999999876 7789999999
Q ss_pred CccCHHHHHhCceeEEEcC
Q 002398 859 GANDVGMLQEADIGVGISG 877 (928)
Q Consensus 859 G~ND~~ml~~AdvGIa~~g 877 (928)
+.||++|++.||+++++.+
T Consensus 170 s~~Dl~~a~~A~~~~a~~~ 188 (226)
T d2feaa1 170 SVTDVEAAKLSDLCFARDY 188 (226)
T ss_dssp CGGGHHHHHTCSEEEECHH
T ss_pred chhhHHHHHHCCEEEEecc
Confidence 9999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.48 E-value=1.8e-07 Score=95.12 Aligned_cols=58 Identities=22% Similarity=0.273 Sum_probs=46.3
Q ss_pred cccHHHHHHHHhhcCC---CeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccc
Q 002398 835 PKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 893 (928)
Q Consensus 835 p~qK~~iV~~l~~~~~---~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~ 893 (928)
...|+..++.+.+..| ..|+++|||.||.+||+.|+.||+|.+. ...++..||.+...
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na-~~~lk~~a~~~~~~ 220 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNA-QPELLHWYDQWGDS 220 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTC-CHHHHHHHHHHCCT
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCC-CHHHHHHhhccccc
Confidence 3479999998877654 5699999999999999999999999543 34488888865544
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.46 E-value=2.2e-07 Score=91.52 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=83.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhH
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 777 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (928)
..++.+++.+.++.++..|..+.++||.....+.......++...-...+......
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 128 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------ 128 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE------------------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc------------------------
Confidence 35788999999999999999999999999999999888877643211111111000
Q ss_pred HHhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEec--CcccHHHHHHHHhhc---CCCe
Q 002398 778 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQKALVTRLVKTK---TSST 852 (928)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~--sp~qK~~iV~~l~~~---~~~~ 852 (928)
........ .+..|...+..+.+. ....
T Consensus 129 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (210)
T d1j97a_ 129 ------------------------------------------------LTGDVEGEVLKENAKGEILEKIAKIEGINLED 160 (210)
T ss_dssp ------------------------------------------------EEEEEECSSCSTTHHHHHHHHHHHHHTCCGGG
T ss_pred ------------------------------------------------ccccccccccccccccchhhhHHHHhcccccc
Confidence 00011111 112233333333221 3467
Q ss_pred EEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccc
Q 002398 853 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 895 (928)
Q Consensus 853 vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~ 895 (928)
++|||||.||++|++.||+||||.+.+. .+..||+++...+
T Consensus 161 ~i~iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~d 201 (210)
T d1j97a_ 161 TVAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRD 201 (210)
T ss_dssp EEEEESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSC
T ss_pred eEEecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCCC
Confidence 9999999999999999999999944443 7889999997643
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.31 E-value=3.4e-07 Score=91.60 Aligned_cols=62 Identities=18% Similarity=0.201 Sum_probs=45.8
Q ss_pred EecCcc--cHHHHHHHHhhcCCCeEEEEcCCccCHHHHHhCceeEEEcCcchhhHhHhcceeccccccc
Q 002398 831 CRSSPK--QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 897 (928)
Q Consensus 831 ~r~sp~--qK~~iV~~l~~~~~~~vl~iGDG~ND~~ml~~AdvGIa~~g~~~~~a~~~aD~vi~~f~~l 897 (928)
....|. .|+..++.+.+ ...+++|||+.||.+||+.|+-|++|...+ ++..|++.+.+-.-+
T Consensus 151 idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev 214 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEM 214 (229)
T ss_dssp EEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHH
T ss_pred EEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHH
Confidence 345554 69999999986 357899999999999999997776663222 245789998764443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.30 E-value=6e-07 Score=90.38 Aligned_cols=55 Identities=15% Similarity=0.270 Sum_probs=46.1
Q ss_pred cHHHHHHHHhhcCCCeEEEEcC----CccCHHHHHhCc-eeEEEcCcchhhHhHhcceecc
Q 002398 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAIA 892 (928)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~Ad-vGIa~~g~~~~~a~~~aD~vi~ 892 (928)
.|+..++.|.+.....|++||| |.||.+||++|+ .|++|++++. .++..+|++++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~-~~k~~~~~~~~ 244 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQD-TVQRCREIFFP 244 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHH-HHHHHHHHHCT
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHH-HHHHHHHhcCC
Confidence 6999999998766678999999 569999999997 6999965544 48999998763
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=6.6e-06 Score=82.50 Aligned_cols=52 Identities=21% Similarity=0.351 Sum_probs=39.6
Q ss_pred cHHHHHHHHhhcCCCeEEEEcC----CccCHHHHHhCc-eeEEEcCcchhhHhHhccee
Q 002398 837 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIA 890 (928)
Q Consensus 837 qK~~iV~~l~~~~~~~vl~iGD----G~ND~~ml~~Ad-vGIa~~g~~~~~a~~~aD~v 890 (928)
+|+..++.|.......|++||| |.||++||+.|+ .|+++++.+. .+..++.+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~--~~~~~~~l 241 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED--TRRICELL 241 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH--HHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH--HHHHHHHH
Confidence 7998888887655678999999 789999999997 6888866554 56666543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.62 E-value=5e-05 Score=74.94 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=84.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
.++.++++++++.|++.|++++++||.....+..+.+++||...-..++ .....
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~--~~~~~------------------------ 147 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML--GGQSL------------------------ 147 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE--CTTTS------------------------
T ss_pred cchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc--ccccc------------------------
Confidence 3568999999999999999999999999999999999999864221111 00000
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCCCeEEEEcC
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 858 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~~~vl~iGD 858 (928)
-...-.|.--..+.+.++- ....+++|||
T Consensus 148 --------------------------------------------------~~~kp~p~~~~~~~~~~~~-~~~~~~~igD 176 (224)
T d2hsza1 148 --------------------------------------------------PEIKPHPAPFYYLCGKFGL-YPKQILFVGD 176 (224)
T ss_dssp --------------------------------------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEEES
T ss_pred --------------------------------------------------ccccccchhhHHHHHHhhh-hhhccchhcC
Confidence 0000011111223333332 4578999999
Q ss_pred CccCHHHHHhCce-eEEEc-C--cchhhHhHhcceecccccccchh
Q 002398 859 GANDVGMLQEADI-GVGIS-G--VEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 859 G~ND~~ml~~Adv-GIa~~-g--~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
+.+|+.+-+.|++ .|.+. | .........+|+++.++.-|.++
T Consensus 177 ~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 177 SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred cHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 9999999999997 45553 1 11122345689999998888776
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.00021 Score=70.01 Aligned_cols=119 Identities=13% Similarity=0.106 Sum_probs=80.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.++|+.|++.|+++.++||.+...+..+.+.+|+...=..++.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~------------------------------- 136 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS------------------------------- 136 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccccccc-------------------------------
Confidence 3469999999999999999999999999999999999999532111111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCccc--HHHHHHHHhhcCCCeEEEEc
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ--KALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~q--K~~iV~~l~~~~~~~vl~iG 857 (928)
++... +..|+- =..+++.+.- ....+++||
T Consensus 137 -----------------------~~~~~------------------------~~Kp~~~~~~~~~~~l~~-~~~~~l~ig 168 (218)
T d1te2a_ 137 -----------------------AEKLP------------------------YSKPHPQVYLDCAAKLGV-DPLTCVALE 168 (218)
T ss_dssp -----------------------CTTSS------------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEE
T ss_pred -----------------------ccccc------------------------cchhhHHHHHHHHHHcCC-CchhcEEEe
Confidence 10000 011221 1233444432 457899999
Q ss_pred CCccCHHHHHhCceeE-EEcCcc--hhhHhHhcceeccccccc
Q 002398 858 DGANDVGMLQEADIGV-GISGVE--GMQAVMSSDIAIAQFRFL 897 (928)
Q Consensus 858 DG~ND~~ml~~AdvGI-a~~g~~--~~~a~~~aD~vi~~f~~l 897 (928)
|+.+|+.|-+.|++.. ++.+.. .......||+++.++.-|
T Consensus 169 D~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 169 DSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp SSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred eCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 9999999999999754 443321 122235689998887765
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=8.5e-05 Score=67.20 Aligned_cols=107 Identities=17% Similarity=0.310 Sum_probs=75.2
Q ss_pred ecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcH
Q 002398 533 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADS 612 (928)
Q Consensus 533 ~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~ 612 (928)
++||..+|++++|++.+....... .+.-....+|+...+...+.+ +|+ .+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERDV-------------------QSLHATFVPFTAQSRMSGINI---DNR--MIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCCT-------------------TTTTCEEEEEETTTTEEEEEE---TTE--EEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCcccc-------------------ccccccccccccccceEEEEE---CCE--EEEecHHH
Confidence 579999999999997543221100 000012234544444333322 343 56679998
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEEEEecCHHHHHHHHHHHHHHhhhcccCHHHHHHHHHHHHhccceEe
Q 002398 613 VMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 692 (928)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A~k~l~~~e~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~dl~ll 692 (928)
.|..++...+..+...+.+.++.++.+|.+++.+| .|-+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEEE
Confidence 88887776655677888899999999999999999 688999
Q ss_pred eeeeccccCC
Q 002398 693 GATAVEDKLQ 702 (928)
Q Consensus 693 G~~~i~D~lr 702 (928)
|++++.|++|
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999987
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.12 E-value=0.0011 Score=67.55 Aligned_cols=48 Identities=17% Similarity=0.294 Sum_probs=43.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEE
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 747 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~ 747 (928)
+||+|+++.++.|++.|+++.++||--...+.++++++|+..++..++
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~ 182 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV 182 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEE
Confidence 489999999999999999999999999999999999999876654443
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.11 E-value=0.00063 Score=65.98 Aligned_cols=118 Identities=15% Similarity=0.113 Sum_probs=82.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
-++.+++.+.++.|+..+ ++.++|+.+...+..+...+|+...-.
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd---------------------------------- 127 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD---------------------------------- 127 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----------------------------------
Confidence 467899999999999775 899999999999999999999864211
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHHHHHHHHhhc---CCCeEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 855 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~---~~~~vl~ 855 (928)
.++.+...+..|..+...+.+. ....+++
T Consensus 128 ------------------------------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 128 ------------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp ------------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred ------------------------------------------------ccccccccccccccccchhhhhhhccccccee
Confidence 1233344444555444444333 3368999
Q ss_pred EcCCccCHHHHHhCce-eEEEc-Ccc--hhhHhHhcceecccccccch
Q 002398 856 IGDGANDVGMLQEADI-GVGIS-GVE--GMQAVMSSDIAIAQFRFLER 899 (928)
Q Consensus 856 iGDG~ND~~ml~~Adv-GIa~~-g~~--~~~a~~~aD~vi~~f~~l~~ 899 (928)
|||+.+|+.|-+.|++ .|++. |.. .......+|+++.++..|..
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 9999999999999998 56663 321 11122348999887666544
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.05 E-value=0.00018 Score=71.10 Aligned_cols=42 Identities=24% Similarity=0.209 Sum_probs=37.7
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aG-I~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++-||+.++++.|++.| +++.++||.....+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999864
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.94 E-value=0.00042 Score=69.81 Aligned_cols=42 Identities=31% Similarity=0.279 Sum_probs=38.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.+|+.++++.|++.|+++.++||.+...+..+.+..|+..
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~ 140 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG 140 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc
Confidence 578999999999999999999999999999999988888753
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.72 E-value=0.00076 Score=65.12 Aligned_cols=41 Identities=20% Similarity=0.195 Sum_probs=34.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+..
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~ 122 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVES 122 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccc
Confidence 4679999999999999999999998654 5667778888753
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.56 E-value=0.0027 Score=62.30 Aligned_cols=121 Identities=13% Similarity=0.105 Sum_probs=78.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 779 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (928)
++.|++.++++.|+ +|++++++|+-.......+.+.+|+...=..++
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~-------------------------------- 146 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSIT-------------------------------- 146 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEE--------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccc--------------------------------
Confidence 46799999999997 589999999999999999999988853211111
Q ss_pred hhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccH--HHHHHHHhhcCCCeEEEEc
Q 002398 780 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK--ALVTRLVKTKTSSTTLAIG 857 (928)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK--~~iV~~l~~~~~~~vl~iG 857 (928)
...... ...|+-. ..+++.+.- ....+++||
T Consensus 147 ----------------------~s~~~~------------------------~~KP~~~~~~~~~~~l~~-~p~~~l~vg 179 (230)
T d1x42a1 147 ----------------------TSEEAG------------------------FFKPHPRIFELALKKAGV-KGEEAVYVG 179 (230)
T ss_dssp ----------------------EHHHHT------------------------BCTTSHHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ----------------------cccccc------------------------ccchhhHHHHHHHhhhcc-cccccceee
Confidence 000000 0112211 123333332 446799999
Q ss_pred CC-ccCHHHHHhCceeE-EEc-CcchhhHhHhcceecccccccchh
Q 002398 858 DG-ANDVGMLQEADIGV-GIS-GVEGMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 858 DG-~ND~~ml~~AdvGI-a~~-g~~~~~a~~~aD~vi~~f~~l~~l 900 (928)
|. .+|+.+-+.|++-. .+. +.........+|+++.+++.|..+
T Consensus 180 D~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~ 225 (230)
T d1x42a1 180 DNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKI 225 (230)
T ss_dssp SCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHH
T ss_pred cCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHH
Confidence 97 58999999998864 332 222233556789999998877666
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.52 E-value=0.0027 Score=60.04 Aligned_cols=52 Identities=19% Similarity=0.269 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCccCHHHHHhCcee--EEEc-Ccc-hhhHhHhcceecccccccchh
Q 002398 849 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVE-GMQAVMSSDIAIAQFRFLERL 900 (928)
Q Consensus 849 ~~~~vl~iGDG~ND~~ml~~AdvG--Ia~~-g~~-~~~a~~~aD~vi~~f~~l~~l 900 (928)
..+.++||||..+|+.|=+.|+++ +.+. |.. .......||+++.++..+.++
T Consensus 124 ~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 124 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 346799999999999999999985 4443 332 222456699999888777665
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.44 E-value=0.0011 Score=64.19 Aligned_cols=41 Identities=12% Similarity=0.212 Sum_probs=36.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
++.|++.++++.|++ ++++.++|+.....+..+.+..|+..
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccc
Confidence 466999999999974 79999999999999999999998854
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.21 E-value=0.0063 Score=56.25 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=30.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCh-hHHHHHHHHcCc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKM-ETAINIGFACSL 739 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~-~ta~~ia~~~gi 739 (928)
++.|++.++++.|++.|+++.++|+-+. ..+...-+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997654 344444444444
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.10 E-value=0.0051 Score=60.65 Aligned_cols=43 Identities=14% Similarity=0.169 Sum_probs=38.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
.-.+.|++.+++++|++.|+++.++|+............+|+-
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 3456899999999999999999999999999888888888874
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.10 E-value=0.0068 Score=57.26 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcc
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 740 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~ 740 (928)
++.+|+++.++.|++.|++++++|+.+... ..+.+.+++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 567999999999999999999999976544 4566777765
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.84 E-value=0.0079 Score=59.45 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=35.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
+-|++.++++.|++ |++++++|+.+........+.+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999985 89999999999999999899999864
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.76 E-value=0.0014 Score=59.72 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=28.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~ 727 (928)
+|++.+++.+.++.|+++|++++++||++.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578999999999999999999999999975
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.31 E-value=0.038 Score=54.67 Aligned_cols=39 Identities=5% Similarity=0.141 Sum_probs=32.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
++.=+++.++|++|+++|++++++|+....+...+++.+
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333378999999999999999999998888888877654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.24 E-value=0.11 Score=51.05 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=34.4
Q ss_pred eeeeccccCCCChHHHHHHHHHcCCeEEEEcC---CChhHHHHHHHHcCcc
Q 002398 693 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 740 (928)
Q Consensus 693 G~~~i~D~lr~~~~~~I~~Lk~aGI~v~mlTG---D~~~ta~~ia~~~gi~ 740 (928)
|++.-.+++=+++.++|+.|+++|++++++|+ +........-+++|+-
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 34444455557999999999999999999985 4455555555667764
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.26 E-value=0.21 Score=49.17 Aligned_cols=60 Identities=15% Similarity=0.227 Sum_probs=39.1
Q ss_pred HHHHHHhhcCCCeEEEEcCCc-cCHHHHHhCce-eEEE-cCcchh-hHh---Hhcceecccccccchh
Q 002398 840 LVTRLVKTKTSSTTLAIGDGA-NDVGMLQEADI-GVGI-SGVEGM-QAV---MSSDIAIAQFRFLERL 900 (928)
Q Consensus 840 ~iV~~l~~~~~~~vl~iGDG~-ND~~ml~~Adv-GIa~-~g~~~~-~a~---~~aD~vi~~f~~l~~l 900 (928)
.+.+.+.- ....++||||.. +|+.+-+.|++ +|.+ +|.... ... ..+||++.+..-|.++
T Consensus 193 ~a~~~l~~-~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 193 VISEKFGV-PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHTC-CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHhhhcc-CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 34444432 457899999995 69999999997 5665 332211 112 2349999887766665
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.03 E-value=0.045 Score=52.37 Aligned_cols=26 Identities=27% Similarity=0.330 Sum_probs=23.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD 725 (928)
++-|++.++|++|+++|+++.++|--
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 46799999999999999999999963
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.00 E-value=0.021 Score=54.13 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=34.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCh----hHHHHHHHHcCcccC
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKM----ETAINIGFACSLLRQ 742 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~----~ta~~ia~~~gi~~~ 742 (928)
..+++.+.++.+++.|++|+.+|||.. .|+.++.+.+|+...
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~ 132 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT 132 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcc
Confidence 357999999999999999999999965 556666666787543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.85 E-value=0.03 Score=53.93 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=34.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 698 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 698 ~D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
..++-+++.+.++.|++.|+++.++|+... +..+....|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 566777777754
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=93.68 E-value=0.034 Score=53.34 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=37.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
..+.+++.++++.|++.|+++.++|+-....+.......++..
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 3457899999999999999999999999988888888777754
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.43 E-value=0.046 Score=52.54 Aligned_cols=124 Identities=13% Similarity=0.153 Sum_probs=77.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHH
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 778 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (928)
..+.+++.+.+++|+ .+..++|+-....+..+-..+|+...-...+
T Consensus 84 ~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 129 (222)
T d2fdra1 84 VKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHI------------------------------- 129 (222)
T ss_dssp CCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCE-------------------------------
T ss_pred cchhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceee-------------------------------
Confidence 347889888887776 4557899999999999999999864311110
Q ss_pred HhhhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHHHHHHHHhhcCCeEEEEecCcccHH--HHHHHHhhcCCCeEEEE
Q 002398 779 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKA--LVTRLVKTKTSSTTLAI 856 (928)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~~~~~~~~~~~~~~v~~r~sp~qK~--~iV~~l~~~~~~~vl~i 856 (928)
+++... -..+..|.... .+.+.+.- ..+.+++|
T Consensus 130 ----------------------~~~~~~----------------------~~~~~KP~~~~~~~~~~~l~~-~p~~~l~v 164 (222)
T d2fdra1 130 ----------------------YSAKDL----------------------GADRVKPKPDIFLHGAAQFGV-SPDRVVVV 164 (222)
T ss_dssp ----------------------EEHHHH----------------------CTTCCTTSSHHHHHHHHHHTC-CGGGEEEE
T ss_pred ----------------------cccccc----------------------cccccccCHHHHHHHHHhhCC-CCceEEEE
Confidence 000000 00012333322 33344432 45789999
Q ss_pred cCCccCHHHHHhCcee-EEEcCcch------hh-HhHhcceecccccccchhh
Q 002398 857 GDGANDVGMLQEADIG-VGISGVEG------MQ-AVMSSDIAIAQFRFLERLL 901 (928)
Q Consensus 857 GDG~ND~~ml~~AdvG-Ia~~g~~~------~~-a~~~aD~vi~~f~~l~~ll 901 (928)
||+.+|+.+=+.|++- |++.+... .. ....||+++.+++-|..+|
T Consensus 165 gDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 165 EDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp ESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred cCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 9999999999999974 56643221 11 1234899999988876663
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=92.37 E-value=0.24 Score=48.54 Aligned_cols=39 Identities=8% Similarity=0.068 Sum_probs=30.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 737 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~ 737 (928)
+.+=+++.++|+.|+++|++++++|+....+...+++.+
T Consensus 17 ~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 17 KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 444488999999999999999999986665555555543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.90 E-value=0.53 Score=44.45 Aligned_cols=160 Identities=13% Similarity=0.117 Sum_probs=88.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCcccCCceEEEEeCCCCccccccchhhHHHHHHHHHHhhHHHh
Q 002398 701 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 780 (928)
Q Consensus 701 lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (928)
+-||+.++++.|++. ....++|---.+-+.++|...|+.. .. ..+.-..+.......+....+...- .+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~---e~-~~T~~~lD~~~~p~ee~e~ll~i~~------~~ 150 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG---EL-HGTEVDFDSIAVPEGLREELLSIID------VI 150 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS---EE-EEEBCCGGGCCCCHHHHHHHHHHHH------HH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc---ee-ecccccccccCCChHHHHHHHHHhh------hc
Confidence 569999999999876 6777777777888999999999942 22 1222222222222222221111110 00
Q ss_pred hhhhhhcccCCCCCCCeEEEEechhhHHHhHHHHH-HHHHHHhhcCCeEEEEecCcccHHHHHHHHhhcCC-CeEEEEcC
Q 002398 781 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVK-DLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS-STTLAIGD 858 (928)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~l~~~~~-~~~~~~~~~~~~~v~~r~sp~qK~~iV~~l~~~~~-~~vl~iGD 858 (928)
.+ -+++.+..++.+-+. -....++..-+.| --..|..+++..-+..+ ...+.+||
T Consensus 151 ~d------------------~~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VGD 207 (308)
T d1y8aa1 151 AS------------------LSGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVGD 207 (308)
T ss_dssp HH------------------CCHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEEC
T ss_pred cC------------------ccHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceeccC
Confidence 00 011112222211110 1112222232322 22457777765543222 34599999
Q ss_pred CccCHHHHHhC----ceeEEEcCcchhhHhHhcceecccccc
Q 002398 859 GANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRF 896 (928)
Q Consensus 859 G~ND~~ml~~A----dvGIa~~g~~~~~a~~~aD~vi~~f~~ 896 (928)
+..|+.||+.| +++|+..|++- |...||+++..-+.
T Consensus 208 SITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 208 SISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp SGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred ccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccch
Confidence 99999999987 56666677776 88999999987554
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.70 E-value=0.11 Score=44.18 Aligned_cols=76 Identities=22% Similarity=0.324 Sum_probs=48.6
Q ss_pred ecCccHHHHHHHHHHCCcEEEEecCCeeEEEecCCCCCcceeEEEEEeeeecccCCCceEEEEEEeCCCeEEEEEecCcH
Q 002398 533 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADS 612 (928)
Q Consensus 533 ~~~p~e~alv~~a~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~g~~~l~~KGa~~ 612 (928)
+.||..+|+++++++.+..+..-+ . ....+|+|+.. ..+++ |.+.
T Consensus 26 S~HPlA~AIv~~a~~~~~~~~~~~--~-----~~~~~G~Gi~g-------------------------~~v~v---G~~~ 70 (113)
T d2b8ea2 26 SEHPIAEAIVKKALEHGIELGEPE--K-----VEVIAGEGVVA-------------------------DGILV---GNKR 70 (113)
T ss_dssp CCSHHHHHHHHHHHTTTCCCCCCS--C-----EEEETTTEEEE-------------------------TTEEE---ECHH
T ss_pred CCCchHHHHHHHHHHhcCCCCccc--c-----ceeeccceEEe-------------------------EEEEE---CcHH
Confidence 579999999999999877543211 1 11123444331 11222 6665
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhccCeEEEEE
Q 002398 613 VMFERLAENGREFEEQTKEHINEYADAGLRTLILA 647 (928)
Q Consensus 613 ~i~~~~~~~~~~~~~~~~~~l~~~~~~Glr~l~~A 647 (928)
-|.+ .+-.+.+.+.+.++.+..+|..++.+|
T Consensus 71 ~~~~----~~~~~~~~~~~~~~~~~~~G~T~v~va 101 (113)
T d2b8ea2 71 LMED----FGVAVSNEVELALEKLEREAKTAVIVA 101 (113)
T ss_dssp HHHH----TTCCCCHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHh----cCCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 5533 222455677888999999999999999
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=88.80 E-value=0.18 Score=45.70 Aligned_cols=27 Identities=33% Similarity=0.443 Sum_probs=24.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDK 726 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~ 726 (928)
++-|++.++|+.|++.|++++++|..+
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred eECccHHHHHHHHHHcCCceeeecccc
Confidence 457899999999999999999999753
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=85.50 E-value=0.2 Score=47.59 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=23.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGD 725 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD 725 (928)
.+.+++.+.+..|++.|++++++|+-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~ 122 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNN 122 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCccHHHHHHHHHhcCCceEEeecc
Confidence 46789999999999999999999963
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.30 E-value=0.28 Score=46.22 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=24.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKM 727 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~ 727 (928)
.+.+++.+.++.|++.|++++++|+...
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~ 126 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWL 126 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CCCccHHHHHHHHHhccCccccccccch
Confidence 3578999999999999999999997644
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=83.72 E-value=1.2 Score=42.55 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=34.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCccc
Q 002398 699 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 741 (928)
Q Consensus 699 D~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 741 (928)
.++-+++.+++++|+ ++.+.++|.-+...+..+....++..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 456789999999886 78999999999988888888887754
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=80.98 E-value=0.34 Score=44.33 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=25.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCChhHH
Q 002398 700 KLQNGVPECIDKLAQAGIKLWVLTGDKMETA 730 (928)
Q Consensus 700 ~lr~~~~~~I~~Lk~aGI~v~mlTGD~~~ta 730 (928)
++.+++.+.+..++..|+++.++|+-....+
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~ 114 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHH
Confidence 4678899999999999999999998655443
|