Query 002401
Match_columns 927
No_of_seqs 614 out of 3038
Neff 6.1
Searched_HMMs 46136
Date Thu Mar 28 23:11:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002401.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002401hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0667 Dual-specificity tyros 100.0 3.1E-63 6.6E-68 569.7 27.0 397 40-466 122-518 (586)
2 KOG0661 MAPK related serine/th 100.0 1.5E-52 3.3E-57 464.3 13.8 284 108-457 9-298 (538)
3 KOG0659 Cdk activating kinase 100.0 1.5E-51 3.2E-56 429.7 19.1 289 109-466 2-297 (318)
4 KOG0593 Predicted protein kina 100.0 1.7E-51 3.7E-56 434.9 16.4 281 109-455 2-289 (396)
5 KOG0600 Cdc2-related protein k 100.0 3.4E-50 7.4E-55 448.3 21.0 292 108-467 116-417 (560)
6 KOG0615 Serine/threonine prote 100.0 3E-50 6.6E-55 439.8 16.0 262 106-458 169-445 (475)
7 KOG0663 Protein kinase PITSLRE 100.0 1.8E-49 3.9E-54 424.2 21.2 299 106-469 73-380 (419)
8 KOG0660 Mitogen-activated prot 100.0 4.6E-49 1E-53 426.8 23.0 281 108-457 21-317 (359)
9 KOG0575 Polo-like serine/threo 100.0 1.4E-48 3E-53 444.8 24.6 260 98-456 8-275 (592)
10 KOG0671 LAMMER dual specificit 100.0 1E-48 2.2E-53 425.3 16.8 323 88-456 73-412 (415)
11 KOG0658 Glycogen synthase kina 100.0 2.5E-48 5.4E-53 421.7 17.8 301 109-480 24-334 (364)
12 KOG0581 Mitogen-activated prot 100.0 5.4E-47 1.2E-51 412.1 18.9 252 109-456 79-341 (364)
13 KOG0598 Ribosomal protein S6 k 100.0 1.8E-46 3.9E-51 407.9 20.1 272 108-476 24-307 (357)
14 KOG0592 3-phosphoinositide-dep 100.0 4.5E-46 9.7E-51 418.2 23.0 260 108-464 72-352 (604)
15 KOG0594 Protein kinase PCTAIRE 100.0 4.4E-46 9.5E-51 404.3 19.3 285 109-459 11-311 (323)
16 KOG1290 Serine/threonine prote 100.0 8.8E-45 1.9E-49 402.8 28.7 319 92-459 65-559 (590)
17 KOG0670 U4/U6-associated splic 100.0 1.5E-46 3.2E-51 417.7 14.5 340 82-455 410-751 (752)
18 PTZ00284 protein kinase; Provi 100.0 3.8E-44 8.2E-49 416.6 33.3 302 108-458 128-446 (467)
19 KOG0605 NDR and related serine 100.0 1.3E-44 2.8E-49 406.9 23.4 263 107-464 139-459 (550)
20 KOG0595 Serine/threonine-prote 100.0 1.1E-44 2.4E-49 396.9 22.1 258 108-457 9-275 (429)
21 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.6E-44 1.2E-48 387.5 27.0 278 109-453 5-288 (288)
22 KOG0588 Serine/threonine prote 100.0 1.6E-44 3.5E-49 412.2 20.0 253 107-457 10-270 (786)
23 KOG0583 Serine/threonine prote 100.0 9.3E-44 2E-48 402.0 25.9 252 108-456 16-281 (370)
24 KOG0616 cAMP-dependent protein 100.0 2.5E-44 5.4E-49 380.2 19.2 266 109-472 44-319 (355)
25 cd07862 STKc_CDK6 Catalytic do 100.0 2.8E-43 6.1E-48 380.1 27.0 279 109-453 1-290 (290)
26 cd07848 STKc_CDKL5 Catalytic d 100.0 4.2E-43 9.1E-48 378.2 26.9 280 109-453 1-287 (287)
27 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.8E-43 1E-47 382.4 27.6 285 108-457 4-295 (303)
28 KOG0666 Cyclin C-dependent kin 100.0 4E-44 8.6E-49 379.6 13.8 295 109-459 24-346 (438)
29 KOG0033 Ca2+/calmodulin-depend 100.0 5.9E-45 1.3E-49 375.7 6.9 257 109-456 11-273 (355)
30 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.4E-42 5.1E-47 380.9 27.0 279 110-457 1-297 (338)
31 cd07863 STKc_CDK4 Catalytic do 100.0 2.7E-42 5.9E-47 371.6 26.7 278 110-453 1-288 (288)
32 cd05612 STKc_PRKX_like Catalyt 100.0 7.5E-43 1.6E-47 379.6 21.3 252 109-458 1-262 (291)
33 KOG0694 Serine/threonine prote 100.0 3.7E-43 8E-48 404.2 19.8 259 106-461 365-635 (694)
34 cd07876 STKc_JNK2 Catalytic do 100.0 6.5E-42 1.4E-46 383.3 29.2 290 108-456 20-321 (359)
35 PTZ00036 glycogen synthase kin 100.0 4.6E-42 9.9E-47 397.0 28.1 281 108-457 65-358 (440)
36 KOG0578 p21-activated serine/t 100.0 1.2E-43 2.6E-48 401.7 13.8 263 97-455 261-528 (550)
37 KOG0597 Serine-threonine prote 100.0 1.3E-43 2.9E-48 397.4 13.9 250 109-456 2-257 (808)
38 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.6E-42 2.1E-46 373.2 28.0 282 109-457 6-293 (309)
39 PHA03212 serine/threonine kina 100.0 5.6E-42 1.2E-46 390.5 27.1 282 108-457 91-383 (391)
40 PTZ00263 protein kinase A cata 100.0 2.2E-42 4.8E-47 383.3 22.2 253 108-458 17-279 (329)
41 cd07875 STKc_JNK1 Catalytic do 100.0 1.7E-41 3.6E-46 380.8 29.5 290 108-456 23-324 (364)
42 cd07874 STKc_JNK3 Catalytic do 100.0 1.3E-41 2.8E-46 380.1 26.1 291 108-456 16-317 (355)
43 KOG0032 Ca2+/calmodulin-depend 100.0 7.7E-42 1.7E-46 387.0 24.5 258 108-456 34-299 (382)
44 cd07853 STKc_NLK Catalytic dom 100.0 1.6E-41 3.4E-46 382.4 26.5 283 110-458 1-296 (372)
45 KOG0585 Ca2+/calmodulin-depend 100.0 6.4E-42 1.4E-46 379.3 22.0 259 102-456 90-378 (576)
46 cd05631 STKc_GRK4 Catalytic do 100.0 9.8E-42 2.1E-46 369.4 23.1 256 111-458 2-269 (285)
47 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-41 2.8E-46 378.0 24.5 278 109-456 15-304 (343)
48 cd05571 STKc_PKB Catalytic dom 100.0 6.5E-42 1.4E-46 378.3 21.0 246 115-458 1-259 (323)
49 cd07868 STKc_CDK8 Catalytic do 100.0 3E-41 6.6E-46 369.8 25.5 284 114-453 6-317 (317)
50 KOG0662 Cyclin-dependent kinas 100.0 4.8E-42 1E-46 340.6 16.6 279 110-456 3-289 (292)
51 PTZ00426 cAMP-dependent protei 100.0 1.8E-41 3.9E-46 378.9 22.4 252 109-458 30-292 (340)
52 KOG0610 Putative serine/threon 100.0 1.6E-41 3.4E-46 372.2 20.7 257 109-459 77-401 (459)
53 cd05628 STKc_NDR1 Catalytic do 100.0 4.3E-41 9.2E-46 377.9 24.3 206 109-326 1-249 (363)
54 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.4E-41 7.5E-46 373.4 22.4 260 109-458 1-265 (333)
55 KOG0582 Ste20-like serine/thre 100.0 6.7E-41 1.4E-45 369.5 24.4 264 108-457 25-300 (516)
56 KOG0599 Phosphorylase kinase g 100.0 2.5E-42 5.5E-47 360.5 11.9 254 109-455 17-288 (411)
57 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.9E-40 4.1E-45 361.3 27.1 282 108-456 5-292 (301)
58 cd05593 STKc_PKB_gamma Catalyt 100.0 6.2E-41 1.3E-45 371.9 23.3 247 115-459 1-260 (328)
59 KOG0591 NIMA (never in mitosis 100.0 1E-42 2.2E-47 365.4 8.4 209 109-327 19-242 (375)
60 cd05599 STKc_NDR_like Catalyti 100.0 3.5E-41 7.5E-46 377.5 21.3 255 109-458 1-304 (364)
61 cd05589 STKc_PKN Catalytic dom 100.0 6.2E-41 1.3E-45 370.3 22.9 252 111-458 1-265 (324)
62 KOG4717 Serine/threonine prote 100.0 2.5E-41 5.3E-46 374.9 18.6 254 108-457 17-277 (864)
63 KOG0198 MEKK and related serin 100.0 1.2E-41 2.6E-46 373.9 15.6 255 109-457 17-283 (313)
64 cd07861 STKc_CDK1_euk Catalyti 100.0 4.9E-40 1.1E-44 353.0 27.8 277 110-453 1-285 (285)
65 cd05629 STKc_NDR_like_fungal C 100.0 5.8E-41 1.3E-45 378.4 21.5 206 109-326 1-261 (377)
66 cd05587 STKc_cPKC Catalytic do 100.0 1.4E-40 3E-45 367.6 24.0 252 110-458 1-265 (324)
67 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.4E-41 7.4E-46 374.4 19.3 256 109-459 1-294 (350)
68 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-40 2.5E-45 368.6 23.1 196 110-316 1-210 (332)
69 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-40 3.1E-45 376.3 24.2 204 110-325 2-260 (381)
70 cd05585 STKc_YPK1_like Catalyt 100.0 9.1E-41 2E-45 367.1 21.7 243 117-457 1-254 (312)
71 cd05625 STKc_LATS1 Catalytic d 100.0 8.5E-41 1.8E-45 377.7 21.9 204 110-325 2-260 (382)
72 PHA03207 serine/threonine kina 100.0 1.7E-40 3.6E-45 377.6 24.4 283 108-458 91-383 (392)
73 cd05590 STKc_nPKC_eta Catalyti 100.0 9.8E-41 2.1E-45 368.7 21.5 247 115-458 1-261 (320)
74 cd05598 STKc_LATS Catalytic do 100.0 1.7E-40 3.7E-45 374.1 23.2 203 110-324 2-255 (376)
75 cd07845 STKc_CDK10 Catalytic d 100.0 6.6E-40 1.4E-44 358.3 26.9 287 108-461 6-301 (309)
76 cd05595 STKc_PKB_beta Catalyti 100.0 1.4E-40 3.1E-45 367.9 21.5 246 115-458 1-259 (323)
77 cd07867 STKc_CDC2L6 Catalytic 100.0 7.4E-40 1.6E-44 357.9 26.2 283 115-453 7-317 (317)
78 cd05616 STKc_cPKC_beta Catalyt 100.0 2.7E-40 5.9E-45 365.1 22.8 252 110-458 1-265 (323)
79 cd05591 STKc_nPKC_epsilon Cata 100.0 1.7E-40 3.7E-45 366.3 20.9 247 115-458 1-262 (321)
80 cd05601 STKc_CRIK Catalytic do 100.0 1.1E-40 2.3E-45 368.7 19.2 256 109-458 1-271 (330)
81 cd06649 PKc_MEK2 Catalytic dom 100.0 1.7E-39 3.7E-44 360.2 28.7 201 109-321 5-210 (331)
82 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-40 3E-45 367.7 19.2 246 115-458 1-260 (325)
83 cd05596 STKc_ROCK Catalytic do 100.0 3E-40 6.4E-45 373.0 22.1 256 109-459 43-313 (370)
84 cd05621 STKc_ROCK2 Catalytic d 100.0 4.3E-40 9.3E-45 372.1 23.3 205 109-326 43-260 (370)
85 cd05627 STKc_NDR2 Catalytic do 100.0 2.1E-40 4.6E-45 371.6 20.4 205 109-325 1-248 (360)
86 cd07839 STKc_CDK5 Catalytic do 100.0 9.4E-40 2E-44 351.2 24.4 276 110-453 1-284 (284)
87 PF00069 Pkinase: Protein kina 100.0 1.9E-39 4E-44 342.4 26.2 252 111-453 1-260 (260)
88 KOG0580 Serine/threonine prote 100.0 3.1E-41 6.7E-46 348.3 12.1 252 108-455 21-278 (281)
89 cd07850 STKc_JNK Catalytic dom 100.0 2.8E-39 6.1E-44 361.3 28.5 291 108-456 15-317 (353)
90 cd05605 STKc_GRK4_like Catalyt 100.0 9.1E-40 2E-44 354.0 23.8 257 110-458 1-269 (285)
91 PHA03209 serine/threonine kina 100.0 7.8E-40 1.7E-44 367.4 24.0 191 109-315 66-259 (357)
92 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-39 2.4E-44 359.8 24.1 247 115-458 1-256 (316)
93 cd07841 STKc_CDK7 Catalytic do 100.0 2.6E-39 5.6E-44 350.6 26.5 282 110-460 1-292 (298)
94 cd07832 STKc_CCRK Catalytic do 100.0 4.8E-39 1E-43 345.0 27.3 278 110-454 1-286 (286)
95 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-39 2.5E-44 360.1 23.1 247 115-459 1-260 (323)
96 cd07860 STKc_CDK2_3 Catalytic 100.0 3.4E-39 7.3E-44 346.9 25.8 277 110-453 1-284 (284)
97 cd05570 STKc_PKC Catalytic dom 100.0 9.3E-40 2E-44 360.3 21.6 247 115-458 1-260 (318)
98 cd07837 STKc_CdkB_plant Cataly 100.0 5.7E-39 1.2E-43 347.0 26.9 280 109-454 1-295 (295)
99 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-39 2.9E-44 359.1 21.8 247 115-458 1-256 (316)
100 PLN00034 mitogen-activated pro 100.0 1.6E-39 3.5E-44 363.5 22.7 251 109-457 74-335 (353)
101 cd05619 STKc_nPKC_theta Cataly 100.0 2E-39 4.3E-44 358.0 23.1 247 115-458 1-256 (316)
102 cd05588 STKc_aPKC Catalytic do 100.0 1.5E-39 3.2E-44 360.7 22.0 190 115-315 1-198 (329)
103 cd05608 STKc_GRK1 Catalytic do 100.0 2E-39 4.4E-44 350.4 22.4 191 117-317 1-201 (280)
104 cd05584 STKc_p70S6K Catalytic 100.0 1.5E-39 3.2E-44 359.5 21.8 246 115-458 2-264 (323)
105 cd05615 STKc_cPKC_alpha Cataly 100.0 2.4E-39 5.2E-44 358.1 23.3 252 110-458 1-265 (323)
106 cd05597 STKc_DMPK_like Catalyt 100.0 7.4E-39 1.6E-43 355.4 27.1 206 109-325 1-220 (331)
107 KOG0611 Predicted serine/threo 100.0 1.9E-40 4E-45 360.1 13.7 249 108-455 52-308 (668)
108 cd07844 STKc_PCTAIRE_like Cata 100.0 1.2E-38 2.5E-43 344.3 27.0 280 109-453 5-291 (291)
109 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.8E-38 3.8E-43 343.4 28.1 280 109-453 5-291 (291)
110 PLN00009 cyclin-dependent kina 100.0 1.6E-38 3.5E-43 344.2 27.5 282 109-456 2-290 (294)
111 cd05604 STKc_SGK3 Catalytic do 100.0 2.5E-39 5.4E-44 357.7 20.7 199 115-325 1-208 (325)
112 cd06650 PKc_MEK1 Catalytic dom 100.0 9.8E-39 2.1E-43 355.0 25.6 199 109-319 5-208 (333)
113 cd05622 STKc_ROCK1 Catalytic d 100.0 5.1E-39 1.1E-43 363.3 23.6 205 109-326 43-260 (371)
114 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.7E-38 8.1E-43 338.2 28.9 279 109-453 1-286 (286)
115 cd07836 STKc_Pho85 Catalytic d 100.0 3E-38 6.6E-43 339.0 28.0 277 110-453 1-284 (284)
116 PHA03211 serine/threonine kina 100.0 7.3E-39 1.6E-43 372.2 24.9 190 108-313 168-362 (461)
117 cd07842 STKc_CDK8_like Catalyt 100.0 1.7E-38 3.7E-43 346.1 26.3 288 110-453 1-316 (316)
118 cd05630 STKc_GRK6 Catalytic do 100.0 7.7E-39 1.7E-43 347.1 23.0 197 110-316 1-204 (285)
119 cd05586 STKc_Sck1_like Catalyt 100.0 4.8E-39 1E-43 355.8 21.8 247 117-457 1-260 (330)
120 cd07831 STKc_MOK Catalytic dom 100.0 3E-38 6.5E-43 338.2 27.0 275 111-453 1-282 (282)
121 KOG0604 MAP kinase-activated p 100.0 4.5E-40 9.8E-45 347.7 12.5 261 109-457 61-329 (400)
122 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-39 3.6E-44 357.7 17.3 246 115-458 2-262 (318)
123 cd05618 STKc_aPKC_iota Catalyt 100.0 5.3E-39 1.2E-43 356.6 21.2 189 115-314 1-197 (329)
124 PTZ00024 cyclin-dependent prot 100.0 2.1E-38 4.4E-43 350.8 25.7 283 108-460 7-323 (335)
125 cd07865 STKc_CDK9 Catalytic do 100.0 3E-38 6.5E-43 342.8 26.1 280 109-453 12-310 (310)
126 cd05623 STKc_MRCK_alpha Cataly 100.0 2.8E-38 6.1E-43 350.6 26.4 206 109-325 1-220 (332)
127 cd05624 STKc_MRCK_beta Catalyt 100.0 2.4E-38 5.1E-43 351.4 25.8 206 109-325 1-220 (331)
128 cd05607 STKc_GRK7 Catalytic do 100.0 2.2E-38 4.7E-43 341.8 23.6 191 117-317 1-198 (277)
129 cd07843 STKc_CDC2L1 Catalytic 100.0 3.6E-38 7.7E-43 341.3 25.2 280 109-453 5-293 (293)
130 cd07835 STKc_CDK1_like Catalyt 100.0 4.1E-38 8.9E-43 338.3 25.5 276 111-453 1-283 (283)
131 cd05602 STKc_SGK1 Catalytic do 100.0 7.9E-39 1.7E-43 353.7 20.3 246 115-458 1-259 (325)
132 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.9E-38 4.1E-43 351.6 22.9 190 115-315 1-198 (327)
133 cd05632 STKc_GRK5 Catalytic do 100.0 3.6E-38 7.9E-43 341.5 24.7 258 110-459 1-270 (285)
134 cd05574 STKc_phototropin_like 100.0 5.5E-38 1.2E-42 343.9 26.1 258 109-460 1-299 (316)
135 cd05603 STKc_SGK2 Catalytic do 100.0 9.6E-39 2.1E-43 352.1 20.2 197 115-323 1-206 (321)
136 cd07849 STKc_ERK1_2_like Catal 100.0 7.6E-38 1.6E-42 347.1 27.2 282 108-457 4-299 (336)
137 cd05580 STKc_PKA Catalytic dom 100.0 4.6E-38 9.9E-43 340.8 24.8 253 109-459 1-263 (290)
138 cd07833 STKc_CDKL Catalytic do 100.0 6.1E-38 1.3E-42 336.8 25.0 280 109-453 1-288 (288)
139 KOG0201 Serine/threonine prote 100.0 1.6E-40 3.4E-45 366.6 4.8 250 109-455 13-268 (467)
140 cd06637 STKc_TNIK Catalytic do 100.0 3.7E-38 8E-43 336.3 22.3 200 109-317 6-220 (272)
141 cd08227 PK_STRAD_alpha Pseudok 100.0 4.9E-38 1.1E-42 347.4 23.9 198 113-320 2-217 (327)
142 PHA03210 serine/threonine kina 100.0 2.2E-38 4.7E-43 372.1 22.3 286 108-457 147-461 (501)
143 cd07851 STKc_p38 Catalytic dom 100.0 6.5E-38 1.4E-42 349.2 24.8 282 108-459 14-307 (343)
144 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.3E-37 4.9E-42 345.4 29.1 280 108-457 16-307 (345)
145 KOG0192 Tyrosine kinase specif 100.0 3.3E-38 7.2E-43 354.9 22.4 205 109-325 41-258 (362)
146 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.8E-38 2.1E-42 346.7 25.9 283 108-457 4-298 (337)
147 cd06644 STKc_STK10_LOK Catalyt 100.0 8.7E-38 1.9E-42 338.5 24.8 256 109-458 12-277 (292)
148 KOG0579 Ste20-like serine/thre 100.0 7.6E-40 1.6E-44 368.8 8.8 256 109-457 32-296 (1187)
149 PTZ00267 NIMA-related protein 100.0 8.4E-38 1.8E-42 365.0 26.3 252 109-455 67-328 (478)
150 cd06625 STKc_MEKK3_like Cataly 100.0 9.9E-38 2.1E-42 330.8 24.4 199 109-319 2-213 (263)
151 cd07838 STKc_CDK4_6_like Catal 100.0 2E-37 4.3E-42 332.2 27.0 213 111-330 1-223 (287)
152 cd06608 STKc_myosinIII_like Ca 100.0 8.7E-38 1.9E-42 331.9 24.0 203 108-319 5-224 (275)
153 cd08223 STKc_Nek4 Catalytic do 100.0 2.2E-37 4.8E-42 327.0 26.9 249 110-453 1-257 (257)
154 cd07834 STKc_MAPK Catalytic do 100.0 7.8E-38 1.7E-42 344.7 24.0 282 110-458 1-297 (330)
155 cd08529 STKc_FA2-like Catalyti 100.0 2E-37 4.4E-42 326.7 25.8 249 110-453 1-256 (256)
156 cd07855 STKc_ERK5 Catalytic do 100.0 7.5E-38 1.6E-42 346.9 23.6 281 109-458 5-302 (334)
157 cd07879 STKc_p38delta_MAPK13 C 100.0 1.3E-37 2.9E-42 346.6 25.7 281 109-458 15-305 (342)
158 cd06636 STKc_MAP4K4_6 Catalyti 100.0 9.2E-38 2E-42 335.8 23.2 200 109-317 16-230 (282)
159 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.6E-37 5.7E-42 344.2 26.9 281 108-456 4-306 (342)
160 cd05118 STKc_CMGC Catalytic do 100.0 1.6E-37 3.4E-42 332.3 24.1 276 111-453 1-283 (283)
161 KOG0596 Dual specificity; seri 100.0 4.7E-38 1E-42 353.4 20.8 256 109-458 361-635 (677)
162 PTZ00283 serine/threonine prot 100.0 1.4E-37 3E-42 365.0 25.3 253 108-455 31-302 (496)
163 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.1E-37 1.1E-41 342.3 28.3 282 108-457 14-305 (343)
164 cd06643 STKc_SLK Catalytic dom 100.0 1.6E-37 3.4E-42 334.5 23.0 254 109-456 5-268 (282)
165 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-37 2.7E-42 339.4 22.5 255 106-456 17-276 (296)
166 KOG0669 Cyclin T-dependent kin 100.0 4.3E-40 9.3E-45 340.8 2.8 289 109-459 17-324 (376)
167 KOG4236 Serine/threonine prote 100.0 4.7E-39 1E-43 357.5 11.3 253 114-457 569-826 (888)
168 cd06612 STKc_MST1_2 Catalytic 100.0 1.6E-37 3.4E-42 327.5 22.4 198 109-318 3-204 (256)
169 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.2E-37 2.6E-42 345.2 22.4 201 108-317 6-281 (338)
170 cd07866 STKc_BUR1 Catalytic do 100.0 2.6E-37 5.7E-42 335.6 24.5 279 108-453 7-311 (311)
171 cd07840 STKc_CDK9_like Catalyt 100.0 4.7E-37 1E-41 328.8 25.9 277 111-453 1-287 (287)
172 cd06615 PKc_MEK Catalytic doma 100.0 7.8E-37 1.7E-41 335.0 28.0 198 109-318 1-203 (308)
173 cd07829 STKc_CDK_like Catalyti 100.0 2.7E-37 5.9E-42 330.3 23.7 275 111-453 1-282 (282)
174 KOG0690 Serine/threonine prote 100.0 3.4E-39 7.4E-44 343.1 8.5 271 106-474 165-448 (516)
175 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.6E-37 7.8E-42 330.5 24.3 198 109-315 1-209 (283)
176 KOG0589 Serine/threonine prote 100.0 2.8E-38 6E-43 356.1 16.0 252 109-455 4-263 (426)
177 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.8E-37 6E-42 331.9 23.1 211 109-330 1-218 (286)
178 cd06611 STKc_SLK_like Catalyti 100.0 1.4E-37 3.1E-42 334.0 20.9 254 109-456 5-268 (280)
179 cd06613 STKc_MAP4K3_like Catal 100.0 8.9E-37 1.9E-41 322.9 26.5 201 109-320 3-211 (262)
180 cd06619 PKc_MKK5 Catalytic dom 100.0 3.2E-37 6.9E-42 332.4 23.3 192 109-315 1-195 (279)
181 cd08220 STKc_Nek8 Catalytic do 100.0 6.3E-37 1.4E-41 322.9 25.0 203 110-321 1-209 (256)
182 cd07830 STKc_MAK_like Catalyti 100.0 3.8E-37 8.3E-42 330.3 23.6 278 111-453 1-283 (283)
183 cd06656 STKc_PAK3 Catalytic do 100.0 1.5E-37 3.1E-42 339.1 20.6 200 105-317 15-219 (297)
184 cd06639 STKc_myosinIIIB Cataly 100.0 7.2E-37 1.6E-41 330.8 25.9 204 108-320 21-240 (291)
185 KOG0574 STE20-like serine/thre 100.0 6.1E-40 1.3E-44 345.7 1.8 254 109-457 33-290 (502)
186 KOG0607 MAP kinase-interacting 100.0 3E-38 6.6E-43 335.7 14.7 270 115-459 84-370 (463)
187 cd07864 STKc_CDK12 Catalytic d 100.0 5.1E-37 1.1E-41 332.9 24.6 278 109-453 7-302 (302)
188 cd08218 STKc_Nek1 Catalytic do 100.0 7.8E-37 1.7E-41 323.2 25.3 249 110-453 1-256 (256)
189 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.5E-36 3.2E-41 336.8 28.6 279 108-456 9-294 (328)
190 cd07852 STKc_MAPK15 Catalytic 100.0 5.1E-37 1.1E-41 340.3 24.6 283 108-459 6-304 (337)
191 cd06638 STKc_myosinIIIA Cataly 100.0 4.8E-37 1E-41 330.5 23.7 202 108-318 17-234 (286)
192 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.4E-37 1.6E-41 323.9 24.1 202 109-320 1-214 (267)
193 cd08221 STKc_Nek9 Catalytic do 100.0 1.3E-36 2.8E-41 321.5 25.9 249 110-453 1-256 (256)
194 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.4E-37 1.2E-41 326.4 23.1 197 110-318 1-217 (267)
195 cd06609 STKc_MST3_like Catalyt 100.0 5.1E-37 1.1E-41 328.7 22.9 251 109-456 1-257 (274)
196 cd07857 STKc_MPK1 Catalytic do 100.0 1.4E-36 3.1E-41 336.4 27.2 280 110-457 1-299 (332)
197 cd06631 STKc_YSK4 Catalytic do 100.0 9.1E-37 2E-41 324.7 23.8 196 110-318 1-213 (265)
198 cd06645 STKc_MAP4K3 Catalytic 100.0 2.9E-37 6.3E-42 328.9 20.0 197 109-317 9-213 (267)
199 KOG0197 Tyrosine kinases [Sign 100.0 8.1E-38 1.8E-42 353.6 16.5 211 109-330 206-422 (468)
200 cd06655 STKc_PAK2 Catalytic do 100.0 1E-36 2.3E-41 332.5 24.5 252 109-456 19-275 (296)
201 cd06646 STKc_MAP4K5 Catalytic 100.0 5.2E-37 1.1E-41 327.0 21.4 197 108-316 8-212 (267)
202 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.7E-37 1E-41 331.0 21.3 257 109-457 1-269 (286)
203 cd06630 STKc_MEKK1 Catalytic d 100.0 7.1E-37 1.5E-41 325.2 22.4 197 110-317 1-212 (268)
204 cd05609 STKc_MAST Catalytic do 100.0 1.6E-36 3.5E-41 331.4 25.7 256 109-459 1-282 (305)
205 cd05633 STKc_GRK3 Catalytic do 100.0 1E-36 2.2E-41 329.6 23.6 192 116-316 1-199 (279)
206 PTZ00266 NIMA-related protein 100.0 8.5E-37 1.9E-41 373.9 25.6 256 109-456 13-301 (1021)
207 cd06658 STKc_PAK5 Catalytic do 100.0 4.1E-37 8.8E-42 335.1 19.9 253 109-457 22-279 (292)
208 cd05052 PTKc_Abl Catalytic dom 100.0 3.1E-36 6.7E-41 321.2 24.4 204 109-322 6-215 (263)
209 KOG1989 ARK protein kinase fam 100.0 9.8E-37 2.1E-41 360.5 22.6 199 109-316 37-261 (738)
210 cd08217 STKc_Nek2 Catalytic do 100.0 4.8E-36 1E-40 316.3 25.5 201 110-320 1-217 (265)
211 cd06605 PKc_MAPKK Catalytic do 100.0 1E-36 2.2E-41 323.5 20.5 197 109-316 1-202 (265)
212 cd05096 PTKc_DDR1 Catalytic do 100.0 3.9E-36 8.5E-41 327.8 25.4 208 108-325 4-254 (304)
213 cd08219 STKc_Nek3 Catalytic do 100.0 3.8E-36 8.3E-41 318.2 24.6 202 110-321 1-208 (255)
214 cd05577 STKc_GRK Catalytic dom 100.0 2E-36 4.3E-41 325.5 22.8 191 117-317 1-198 (277)
215 cd06607 STKc_TAO Catalytic dom 100.0 3.5E-36 7.6E-41 329.0 25.0 254 108-457 14-274 (307)
216 cd05122 PKc_STE Catalytic doma 100.0 7.1E-36 1.5E-40 311.2 25.6 200 110-320 1-204 (253)
217 KOG0696 Serine/threonine prote 100.0 5.4E-38 1.2E-42 341.6 9.8 320 32-458 271-614 (683)
218 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.2E-36 1.8E-40 322.7 26.3 198 109-316 1-206 (287)
219 cd06640 STKc_MST4 Catalytic do 100.0 3.7E-36 8E-41 323.4 23.4 253 109-459 4-262 (277)
220 cd06652 STKc_MEKK2 Catalytic d 100.0 7.4E-36 1.6E-40 318.2 25.4 197 109-317 2-213 (265)
221 KOG0665 Jun-N-terminal kinase 100.0 3.8E-37 8.2E-42 328.8 15.3 286 109-454 17-314 (369)
222 cd08225 STKc_Nek5 Catalytic do 100.0 3.6E-36 7.9E-41 317.3 22.6 202 110-320 1-209 (257)
223 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.9E-36 1.1E-40 320.4 23.5 197 110-318 2-217 (272)
224 cd05578 STKc_Yank1 Catalytic d 100.0 1.6E-36 3.4E-41 321.7 19.5 196 110-317 1-203 (258)
225 cd05064 PTKc_EphR_A10 Catalyti 100.0 5E-36 1.1E-40 320.9 23.5 206 109-325 5-221 (266)
226 cd06651 STKc_MEKK3 Catalytic d 100.0 6.2E-36 1.3E-40 319.4 24.1 197 109-317 2-213 (266)
227 KOG0612 Rho-associated, coiled 100.0 1.1E-37 2.4E-42 371.8 11.7 304 108-506 74-403 (1317)
228 cd05572 STKc_cGK_PKG Catalytic 100.0 4.8E-36 1E-40 318.7 22.9 189 117-317 1-196 (262)
229 KOG0986 G protein-coupled rece 100.0 2.5E-37 5.5E-42 340.8 13.4 276 106-473 182-469 (591)
230 KOG0668 Casein kinase II, alph 100.0 2.3E-37 5.1E-42 317.0 12.2 288 105-455 34-327 (338)
231 cd06616 PKc_MKK4 Catalytic dom 100.0 2.2E-36 4.8E-41 326.1 20.4 259 109-456 4-273 (288)
232 PHA03390 pk1 serine/threonine- 100.0 5.7E-36 1.2E-40 321.7 23.3 193 109-317 14-210 (267)
233 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.9E-36 1.7E-40 320.8 24.3 208 108-322 5-231 (277)
234 cd06632 STKc_MEKK1_plant Catal 100.0 6.4E-36 1.4E-40 315.1 22.9 196 110-317 1-206 (258)
235 cd05606 STKc_beta_ARK Catalyti 100.0 7.1E-36 1.5E-40 322.4 23.7 192 116-316 1-199 (278)
236 cd05072 PTKc_Lyn Catalytic dom 100.0 8.2E-36 1.8E-40 316.7 23.7 206 108-324 5-216 (261)
237 cd06626 STKc_MEKK4 Catalytic d 100.0 8.4E-36 1.8E-40 315.8 23.5 195 110-316 1-209 (264)
238 cd06659 STKc_PAK6 Catalytic do 100.0 2.7E-36 5.9E-41 329.4 20.2 254 110-459 22-280 (297)
239 cd06647 STKc_PAK_I Catalytic d 100.0 3.2E-36 6.9E-41 327.9 20.7 255 107-457 17-276 (293)
240 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-35 2.4E-40 315.3 24.0 205 109-325 4-214 (256)
241 cd05611 STKc_Rim15_like Cataly 100.0 7.3E-36 1.6E-40 316.9 22.6 197 115-323 2-203 (260)
242 cd06623 PKc_MAPKK_plant_like C 100.0 1.3E-35 2.8E-40 313.9 24.2 196 110-317 2-204 (264)
243 cd06648 STKc_PAK_II Catalytic 100.0 9.6E-36 2.1E-40 322.5 23.8 253 109-457 19-276 (285)
244 cd05048 PTKc_Ror Catalytic Dom 100.0 6.4E-36 1.4E-40 321.3 22.2 206 109-324 5-238 (283)
245 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 8.1E-36 1.8E-40 321.9 22.8 198 109-318 5-207 (284)
246 cd08215 STKc_Nek Catalytic dom 100.0 1.6E-35 3.4E-40 310.6 24.3 201 110-320 1-210 (258)
247 cd05581 STKc_PDK1 Catalytic do 100.0 5.6E-36 1.2E-40 319.4 21.2 203 109-322 1-231 (280)
248 cd08226 PK_STRAD_beta Pseudoki 100.0 5.5E-36 1.2E-40 331.2 21.5 200 115-324 4-221 (328)
249 KOG0577 Serine/threonine prote 100.0 1.9E-37 4E-42 348.6 9.6 253 109-457 26-285 (948)
250 cd06624 STKc_ASK Catalytic dom 100.0 2.2E-35 4.9E-40 315.0 24.9 193 113-315 12-213 (268)
251 cd06917 STKc_NAK1_like Catalyt 100.0 8.9E-36 1.9E-40 319.2 21.7 198 110-317 2-206 (277)
252 cd05049 PTKc_Trk Catalytic dom 100.0 7.4E-36 1.6E-40 319.8 20.9 206 109-324 5-236 (280)
253 cd06606 STKc_MAPKKK Catalytic 100.0 2.4E-35 5.2E-40 308.4 24.3 196 110-317 1-207 (260)
254 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-35 2.3E-40 320.9 22.2 256 107-456 17-276 (286)
255 cd05106 PTKc_CSF-1R Catalytic 100.0 6.8E-36 1.5E-40 338.2 21.6 200 109-317 38-319 (374)
256 cd05068 PTKc_Frk_like Catalyti 100.0 2.4E-35 5.2E-40 313.6 24.5 206 108-324 5-216 (261)
257 cd05061 PTKc_InsR Catalytic do 100.0 3E-35 6.6E-40 318.4 25.5 206 108-323 5-232 (288)
258 PHA02988 hypothetical protein; 100.0 1.2E-35 2.6E-40 322.7 22.3 197 115-325 26-234 (283)
259 KOG4279 Serine/threonine prote 100.0 4.6E-36 1E-40 341.4 19.1 248 116-456 582-838 (1226)
260 cd06627 STKc_Cdc7_like Catalyt 100.0 4.4E-35 9.5E-40 307.6 25.1 197 110-318 1-204 (254)
261 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.7E-35 5.9E-40 313.4 23.8 205 109-325 4-214 (256)
262 cd05039 PTKc_Csk_like Catalyti 100.0 3.3E-35 7.2E-40 311.2 24.3 201 109-321 6-208 (256)
263 cd05071 PTKc_Src Catalytic dom 100.0 2.8E-35 6.1E-40 314.4 23.8 203 109-323 6-214 (262)
264 cd05089 PTKc_Tie1 Catalytic do 100.0 2.7E-35 5.8E-40 320.6 24.0 207 109-324 2-230 (297)
265 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.8E-36 8.2E-41 322.9 16.6 196 109-317 4-205 (277)
266 cd06641 STKc_MST3 Catalytic do 100.0 3.7E-35 8.1E-40 315.6 24.2 250 109-456 4-259 (277)
267 cd06633 STKc_TAO3 Catalytic do 100.0 6.4E-35 1.4E-39 320.9 26.3 253 109-457 21-280 (313)
268 cd08228 STKc_Nek6 Catalytic do 100.0 6.2E-35 1.4E-39 310.5 25.2 198 109-316 2-209 (267)
269 cd05104 PTKc_Kit Catalytic dom 100.0 1.6E-35 3.5E-40 335.0 22.0 201 109-318 35-322 (375)
270 cd06618 PKc_MKK7 Catalytic dom 100.0 2.2E-35 4.7E-40 320.8 22.0 197 109-315 15-220 (296)
271 cd05093 PTKc_TrkB Catalytic do 100.0 4.8E-35 1E-39 316.9 24.4 208 108-325 4-235 (288)
272 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.7E-35 1E-39 311.1 23.7 204 109-324 6-215 (260)
273 cd05579 STKc_MAST_like Catalyt 100.0 1.8E-35 3.8E-40 312.0 20.3 244 117-456 1-263 (265)
274 cd05062 PTKc_IGF-1R Catalytic 100.0 5.2E-35 1.1E-39 314.1 24.2 206 108-323 5-232 (277)
275 cd08216 PK_STRAD Pseudokinase 100.0 3.4E-35 7.4E-40 321.1 22.8 195 113-319 6-216 (314)
276 cd05069 PTKc_Yes Catalytic dom 100.0 7.7E-35 1.7E-39 309.9 24.8 204 109-324 6-215 (260)
277 cd05082 PTKc_Csk Catalytic dom 100.0 4.9E-35 1.1E-39 310.3 23.1 200 109-321 6-208 (256)
278 cd05059 PTKc_Tec_like Catalyti 100.0 3.2E-35 7E-40 312.1 21.8 203 109-323 4-212 (256)
279 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4E-35 8.7E-40 311.7 22.5 204 109-324 6-215 (260)
280 cd06657 STKc_PAK4 Catalytic do 100.0 2.1E-35 4.5E-40 322.0 20.8 252 110-457 21-277 (292)
281 cd05084 PTKc_Fes Catalytic dom 100.0 4E-35 8.8E-40 309.8 22.3 194 115-319 1-203 (252)
282 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.8E-35 3.8E-40 313.7 19.6 206 109-325 6-217 (261)
283 KOG0603 Ribosomal protein S6 k 100.0 7.7E-36 1.7E-40 342.5 18.1 252 106-458 319-571 (612)
284 cd05034 PTKc_Src_like Catalyti 100.0 7.5E-35 1.6E-39 308.9 24.4 207 108-325 5-217 (261)
285 cd06635 STKc_TAO1 Catalytic do 100.0 7.8E-35 1.7E-39 320.5 25.2 252 109-456 25-283 (317)
286 KOG2345 Serine/threonine prote 100.0 8.2E-36 1.8E-40 309.4 16.2 197 108-314 20-242 (302)
287 cd05090 PTKc_Ror1 Catalytic do 100.0 7.4E-35 1.6E-39 313.8 24.1 205 109-323 5-237 (283)
288 cd08530 STKc_CNK2-like Catalyt 100.0 8.8E-35 1.9E-39 306.1 23.9 201 110-320 1-208 (256)
289 cd00192 PTKc Catalytic domain 100.0 6.2E-35 1.3E-39 306.8 22.6 200 115-324 1-219 (262)
290 cd05035 PTKc_Axl_like Catalyti 100.0 6.1E-35 1.3E-39 310.7 22.7 202 111-322 1-225 (273)
291 cd05032 PTKc_InsR_like Catalyt 100.0 7E-35 1.5E-39 311.8 23.1 206 108-323 5-232 (277)
292 KOG0983 Mitogen-activated prot 100.0 4.3E-36 9.4E-41 314.2 13.3 255 109-456 92-355 (391)
293 cd05613 STKc_MSK1_N N-terminal 100.0 5.5E-35 1.2E-39 316.0 22.4 196 110-316 1-211 (290)
294 cd05108 PTKc_EGFR Catalytic do 100.0 5E-35 1.1E-39 321.5 22.4 200 109-320 7-219 (316)
295 cd06634 STKc_TAO2 Catalytic do 100.0 6E-35 1.3E-39 320.1 22.7 252 109-456 15-273 (308)
296 cd05053 PTKc_FGFR Catalytic do 100.0 6.7E-35 1.4E-39 315.4 22.6 206 109-323 12-245 (293)
297 KOG0586 Serine/threonine prote 100.0 9.2E-36 2E-40 340.3 16.5 252 108-457 55-313 (596)
298 KOG0664 Nemo-like MAPK-related 100.0 6E-37 1.3E-41 319.9 6.2 281 114-458 58-351 (449)
299 cd08222 STKc_Nek11 Catalytic d 100.0 3.9E-35 8.5E-40 311.3 20.0 248 110-453 1-260 (260)
300 cd05054 PTKc_VEGFR Catalytic d 100.0 3.9E-35 8.5E-40 327.1 20.5 200 109-317 7-280 (337)
301 cd05088 PTKc_Tie2 Catalytic do 100.0 6.8E-35 1.5E-39 319.0 21.9 204 109-321 7-232 (303)
302 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.1E-34 8.9E-39 303.4 26.5 198 109-316 2-209 (267)
303 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-34 3E-39 316.4 23.6 203 109-320 18-250 (307)
304 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.7E-34 5.8E-39 306.4 24.9 199 109-319 2-215 (264)
305 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-34 3E-39 308.7 22.7 200 112-321 2-223 (272)
306 smart00219 TyrKc Tyrosine kina 100.0 1.9E-34 4.1E-39 303.4 23.4 204 111-324 1-216 (258)
307 cd05610 STKc_MASTL Catalytic d 100.0 1.9E-34 4E-39 349.7 26.7 144 109-264 4-152 (669)
308 cd05033 PTKc_EphR Catalytic do 100.0 1.9E-34 4E-39 307.6 23.3 204 109-323 4-219 (266)
309 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-34 2.3E-39 308.8 21.2 198 109-316 2-209 (267)
310 cd05109 PTKc_HER2 Catalytic do 100.0 2.3E-34 4.9E-39 309.4 24.0 199 109-319 7-218 (279)
311 cd05112 PTKc_Itk Catalytic dom 100.0 2.3E-34 5.1E-39 304.3 23.5 203 109-323 4-212 (256)
312 cd05094 PTKc_TrkC Catalytic do 100.0 2.6E-34 5.7E-39 311.6 24.4 205 109-323 5-236 (291)
313 cd05123 STKc_AGC Catalytic dom 100.0 9.7E-35 2.1E-39 305.2 20.4 192 117-320 1-200 (250)
314 cd05055 PTKc_PDGFR Catalytic d 100.0 2.2E-34 4.8E-39 315.1 23.8 202 109-319 35-250 (302)
315 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.8E-34 6E-39 315.4 24.6 207 109-324 12-248 (314)
316 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-34 2.6E-39 310.0 21.2 204 112-325 2-218 (259)
317 cd05051 PTKc_DDR Catalytic dom 100.0 2.3E-34 5E-39 311.2 23.3 207 109-325 5-246 (296)
318 cd05083 PTKc_Chk Catalytic dom 100.0 2.1E-34 4.5E-39 305.2 22.4 199 109-321 6-206 (254)
319 cd05091 PTKc_Ror2 Catalytic do 100.0 6.7E-35 1.5E-39 313.8 18.9 207 109-325 5-239 (283)
320 cd05073 PTKc_Hck Catalytic dom 100.0 3.6E-34 7.7E-39 304.8 24.2 204 108-323 5-214 (260)
321 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.5E-34 7.6E-39 305.4 24.2 206 109-325 5-223 (268)
322 KOG0584 Serine/threonine prote 100.0 4.1E-35 8.8E-40 335.3 17.9 251 111-458 42-304 (632)
323 cd05092 PTKc_TrkA Catalytic do 100.0 3.1E-34 6.7E-39 309.3 23.5 206 109-324 5-236 (280)
324 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-34 4.7E-39 312.8 22.2 207 109-325 5-245 (295)
325 cd05045 PTKc_RET Catalytic dom 100.0 3.1E-34 6.8E-39 310.5 23.2 201 110-320 1-237 (290)
326 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.4E-34 5.1E-39 329.1 23.4 201 108-317 36-344 (400)
327 cd05050 PTKc_Musk Catalytic do 100.0 2.9E-34 6.4E-39 310.0 22.8 206 108-323 4-243 (288)
328 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.9E-34 8.4E-39 312.2 23.7 206 109-323 15-250 (304)
329 cd05060 PTKc_Syk_like Catalyti 100.0 3.9E-34 8.5E-39 303.6 22.8 195 115-322 1-208 (257)
330 PRK13184 pknD serine/threonine 100.0 3.3E-34 7.2E-39 349.9 25.0 199 109-317 2-235 (932)
331 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.1E-34 8.8E-39 317.0 23.2 206 109-323 12-247 (334)
332 cd05116 PTKc_Syk Catalytic dom 100.0 5.3E-34 1.1E-38 303.0 23.0 196 116-324 2-210 (257)
333 cd05065 PTKc_EphR_B Catalytic 100.0 5.7E-34 1.2E-38 304.3 23.1 206 109-325 4-224 (269)
334 cd05583 STKc_MSK_N N-terminal 100.0 3.5E-34 7.6E-39 309.4 21.5 196 110-316 1-211 (288)
335 cd05047 PTKc_Tie Catalytic dom 100.0 6E-34 1.3E-38 305.1 22.9 197 116-321 2-220 (270)
336 cd05095 PTKc_DDR2 Catalytic do 100.0 9.2E-34 2E-38 308.0 24.3 204 109-322 5-243 (296)
337 cd05066 PTKc_EphR_A Catalytic 100.0 8.1E-34 1.7E-38 303.2 23.5 205 109-324 4-221 (267)
338 cd05040 PTKc_Ack_like Catalyti 100.0 6.5E-34 1.4E-38 301.0 22.3 200 115-325 1-213 (257)
339 KOG0193 Serine/threonine prote 100.0 4E-35 8.6E-40 333.4 13.1 194 109-317 392-597 (678)
340 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-33 2.4E-38 303.8 23.6 203 108-320 5-227 (280)
341 cd05576 STKc_RPK118_like Catal 100.0 1.6E-34 3.5E-39 304.8 16.7 179 120-314 4-183 (237)
342 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.9E-34 1.1E-38 318.4 21.4 200 109-317 7-286 (343)
343 cd05085 PTKc_Fer Catalytic dom 100.0 1.6E-33 3.4E-38 296.9 23.8 195 115-321 1-203 (250)
344 cd05111 PTK_HER3 Pseudokinase 100.0 1.1E-33 2.4E-38 305.2 23.0 199 109-319 7-218 (279)
345 KOG4721 Serine/threonine prote 100.0 1.9E-35 4.2E-40 331.4 9.2 185 113-317 128-315 (904)
346 cd05056 PTKc_FAK Catalytic dom 100.0 1.5E-33 3.3E-38 301.2 23.4 205 108-324 5-220 (270)
347 cd05041 PTKc_Fes_like Catalyti 100.0 1.7E-33 3.7E-38 296.8 23.3 194 115-320 1-203 (251)
348 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-33 3.6E-38 301.4 23.3 194 115-317 1-214 (262)
349 KOG4645 MAPKKK (MAP kinase kin 100.0 8.4E-36 1.8E-40 359.5 6.1 254 109-459 1235-1503(1509)
350 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-33 2.4E-38 304.8 21.9 194 109-315 3-212 (283)
351 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.5E-33 5.3E-38 301.8 24.5 195 109-314 4-212 (284)
352 cd05044 PTKc_c-ros Catalytic d 100.0 8.9E-34 1.9E-38 302.0 20.8 201 116-323 2-224 (269)
353 PLN03225 Serine/threonine-prot 100.0 8.2E-34 1.8E-38 337.5 22.7 274 107-458 130-458 (566)
354 cd05046 PTK_CCK4 Pseudokinase 100.0 1.3E-33 2.8E-38 302.1 22.0 202 109-320 5-226 (275)
355 cd05057 PTKc_EGFR_like Catalyt 100.0 2.7E-33 5.9E-38 301.1 24.2 203 109-323 7-222 (279)
356 cd05042 PTKc_Aatyk Catalytic d 100.0 1.8E-33 4E-38 300.4 22.4 201 116-326 2-223 (269)
357 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.9E-33 4.1E-38 303.2 22.4 194 116-318 2-227 (274)
358 KOG0608 Warts/lats-like serine 100.0 5.7E-34 1.2E-38 322.4 18.7 201 108-320 628-878 (1034)
359 PHA02882 putative serine/threo 100.0 4.3E-33 9.3E-38 303.8 25.0 201 108-317 11-237 (294)
360 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.1E-33 4.5E-38 321.5 23.6 203 109-320 37-349 (401)
361 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2E-33 4.3E-38 296.8 21.6 192 115-316 1-210 (259)
362 cd05115 PTKc_Zap-70 Catalytic 100.0 3.2E-33 6.9E-38 298.1 23.3 195 116-322 2-208 (257)
363 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-33 2.6E-38 305.0 20.0 195 109-314 4-213 (284)
364 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1E-33 2.2E-38 301.3 18.9 193 115-316 1-209 (258)
365 cd08528 STKc_Nek10 Catalytic d 100.0 5.9E-33 1.3E-37 296.1 23.8 203 110-321 1-221 (269)
366 KOG1026 Nerve growth factor re 100.0 3.3E-34 7.1E-39 337.9 15.5 210 108-327 485-720 (774)
367 cd05058 PTKc_Met_Ron Catalytic 100.0 4.5E-33 9.7E-38 295.5 22.6 195 115-320 1-210 (262)
368 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.1E-33 1.1E-37 297.4 23.1 197 115-321 1-218 (269)
369 KOG0587 Traf2- and Nck-interac 100.0 1.2E-33 2.6E-38 331.5 19.3 257 109-457 19-289 (953)
370 KOG0614 cGMP-dependent protein 100.0 6.3E-35 1.4E-39 324.6 7.2 256 109-460 420-687 (732)
371 KOG1187 Serine/threonine prote 100.0 2.1E-33 4.5E-38 317.0 19.3 196 109-315 75-280 (361)
372 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.4E-33 7.4E-38 299.0 20.1 196 109-315 4-214 (284)
373 KOG1151 Tousled-like protein k 100.0 2E-34 4.3E-39 315.7 9.9 259 108-455 462-746 (775)
374 cd05074 PTKc_Tyro3 Catalytic d 100.0 8.7E-33 1.9E-37 295.1 21.9 201 111-321 1-224 (273)
375 cd05110 PTKc_HER4 Catalytic do 100.0 9.1E-33 2E-37 301.9 22.2 198 109-318 7-217 (303)
376 KOG0194 Protein tyrosine kinas 100.0 2.8E-33 6.2E-38 320.6 16.9 208 109-327 157-377 (474)
377 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.5E-32 5.4E-37 292.6 22.9 200 116-325 2-221 (268)
378 KOG1167 Serine/threonine prote 100.0 2E-33 4.4E-38 309.6 13.3 302 108-458 35-389 (418)
379 KOG1095 Protein tyrosine kinas 100.0 1.6E-32 3.5E-37 333.4 20.5 210 108-327 691-919 (1025)
380 KOG1035 eIF-2alpha kinase GCN2 100.0 8.3E-33 1.8E-37 332.6 15.9 193 109-315 479-817 (1351)
381 KOG4250 TANK binding protein k 100.0 7.7E-33 1.7E-37 319.9 12.3 200 109-315 13-226 (732)
382 KOG4278 Protein tyrosine kinas 100.0 2.5E-32 5.5E-37 307.9 15.5 205 109-323 267-477 (1157)
383 KOG1006 Mitogen-activated prot 100.0 1.1E-33 2.4E-38 295.5 3.9 260 109-456 64-333 (361)
384 smart00220 S_TKc Serine/Threon 100.0 1.9E-31 4.1E-36 275.3 19.8 184 121-316 1-189 (244)
385 KOG0695 Serine/threonine prote 100.0 4.3E-32 9.3E-37 289.5 13.8 196 108-314 249-452 (593)
386 KOG0199 ACK and related non-re 100.0 6.9E-32 1.5E-36 308.7 14.9 207 109-326 110-329 (1039)
387 KOG4257 Focal adhesion tyrosin 100.0 7.9E-32 1.7E-36 305.0 13.4 202 112-325 392-605 (974)
388 PLN03224 probable serine/threo 100.0 8.4E-31 1.8E-35 306.5 21.8 204 107-315 143-435 (507)
389 KOG1094 Discoidin domain recep 100.0 1.9E-31 4.1E-36 301.0 14.7 212 108-330 537-758 (807)
390 KOG1027 Serine/threonine prote 100.0 9.9E-32 2.1E-36 314.3 11.5 192 114-315 514-717 (903)
391 KOG0196 Tyrosine kinase, EPH ( 100.0 6.2E-31 1.3E-35 304.7 11.7 215 108-333 628-855 (996)
392 PLN00113 leucine-rich repeat r 100.0 2E-29 4.4E-34 317.2 21.2 186 109-314 690-879 (968)
393 KOG3653 Transforming growth fa 100.0 1.8E-29 4E-34 280.8 18.2 191 109-314 210-425 (534)
394 KOG1152 Signal transduction se 100.0 4.6E-30 9.9E-35 289.8 12.4 197 109-314 561-770 (772)
395 KOG0984 Mitogen-activated prot 100.0 8.5E-29 1.9E-33 251.4 11.6 210 109-327 46-267 (282)
396 KOG0200 Fibroblast/platelet-de 100.0 5.9E-28 1.3E-32 289.9 21.0 206 109-323 296-533 (609)
397 KOG2052 Activin A type IB rece 100.0 4.6E-28 9.9E-33 268.1 15.9 192 102-308 204-421 (513)
398 cd00180 PKc Catalytic domain o 100.0 7.7E-27 1.7E-31 233.8 21.8 180 117-306 1-187 (215)
399 KOG0576 Mitogen-activated prot 99.9 3.1E-29 6.8E-34 287.0 4.0 257 107-456 13-277 (829)
400 KOG1345 Serine/threonine kinas 99.9 1.7E-28 3.6E-33 257.4 4.1 198 108-315 23-227 (378)
401 KOG1025 Epidermal growth facto 99.9 1.4E-27 3E-32 277.5 11.8 200 110-321 697-909 (1177)
402 smart00221 STYKc Protein kinas 99.9 3E-26 6.4E-31 235.4 20.3 206 111-327 1-216 (225)
403 PLN00181 protein SPA1-RELATED; 99.9 1.2E-27 2.6E-32 295.7 11.0 142 172-314 33-216 (793)
404 smart00750 KIND kinase non-cat 99.9 1.3E-24 2.8E-29 218.3 13.7 108 196-317 1-108 (176)
405 COG0515 SPS1 Serine/threonine 99.9 2.9E-22 6.3E-27 210.1 24.2 196 111-318 2-216 (384)
406 KOG1024 Receptor-like protein 99.9 9.2E-24 2E-28 230.3 13.1 210 108-327 283-513 (563)
407 KOG1164 Casein kinase (serine/ 99.9 7.6E-23 1.7E-27 227.6 19.1 212 110-324 19-248 (322)
408 KOG1163 Casein kinase (serine/ 99.9 6.6E-23 1.4E-27 212.5 12.7 205 109-321 15-229 (341)
409 KOG0590 Checkpoint kinase and 99.9 4.8E-24 1E-28 254.5 4.3 194 112-317 321-529 (601)
410 KOG1165 Casein kinase (serine/ 99.9 2.3E-21 5.1E-26 208.6 14.8 219 109-335 28-261 (449)
411 PRK09188 serine/threonine prot 99.9 2.2E-21 4.8E-26 219.0 14.2 167 109-297 18-210 (365)
412 KOG1240 Protein kinase contain 99.8 1.5E-21 3.2E-26 233.9 8.1 193 110-314 24-240 (1431)
413 KOG0606 Microtubule-associated 99.8 8.7E-21 1.9E-25 227.5 9.8 221 109-459 83-324 (1205)
414 KOG0603 Ribosomal protein S6 k 99.8 1.9E-21 4.2E-26 224.3 3.9 241 116-460 1-253 (612)
415 KOG4158 BRPK/PTEN-induced prot 99.8 1.9E-20 4.1E-25 205.1 10.4 208 101-315 149-459 (598)
416 PF14531 Kinase-like: Kinase-l 99.8 2.4E-20 5.3E-25 203.3 11.2 204 109-315 12-252 (288)
417 PRK10359 lipopolysaccharide co 99.8 1.2E-19 2.5E-24 192.7 8.8 168 108-307 30-216 (232)
418 cd05147 RIO1_euk RIO kinase fa 99.8 2.2E-19 4.7E-24 185.8 9.9 138 114-267 2-168 (190)
419 cd05145 RIO1_like RIO kinase f 99.8 2.4E-18 5.3E-23 177.4 13.5 137 114-267 2-168 (190)
420 KOG1166 Mitotic checkpoint ser 99.8 9.3E-19 2E-23 214.1 11.4 195 108-311 697-901 (974)
421 PRK12274 serine/threonine prot 99.8 9.2E-18 2E-22 175.5 14.9 181 113-317 6-211 (218)
422 PRK10345 hypothetical protein; 99.8 1.3E-17 2.9E-22 175.3 15.7 140 114-263 7-156 (210)
423 smart00090 RIO RIO-like kinase 99.7 7.8E-17 1.7E-21 172.5 12.4 144 109-267 28-199 (237)
424 KOG0195 Integrin-linked kinase 99.7 1.7E-17 3.6E-22 174.7 4.1 200 109-322 190-398 (448)
425 KOG1033 eIF-2alpha kinase PEK/ 99.7 5.5E-17 1.2E-21 184.8 5.7 118 185-308 329-457 (516)
426 PRK14879 serine/threonine prot 99.6 1E-15 2.2E-20 158.8 13.3 132 115-265 2-143 (211)
427 TIGR03724 arch_bud32 Kae1-asso 99.6 6.2E-15 1.3E-19 151.8 12.7 128 116-265 1-138 (199)
428 cd05144 RIO2_C RIO kinase fami 99.6 6.5E-15 1.4E-19 152.4 12.4 137 110-267 16-176 (198)
429 cd05119 RIO RIO kinase family, 99.6 1.1E-14 2.4E-19 148.2 12.1 136 114-267 2-165 (187)
430 PRK09605 bifunctional UGMP fam 99.6 1.2E-14 2.7E-19 172.8 14.0 134 109-265 333-476 (535)
431 KOG1023 Natriuretic peptide re 99.5 1.5E-14 3.4E-19 167.2 11.1 143 170-316 5-161 (484)
432 KOG0590 Checkpoint kinase and 99.5 6.7E-16 1.4E-20 185.0 -3.2 199 109-316 20-233 (601)
433 cd05120 APH_ChoK_like Aminogly 99.5 1.1E-13 2.4E-18 132.7 12.8 134 113-265 2-138 (155)
434 PRK01723 3-deoxy-D-manno-octul 99.5 3.1E-13 6.7E-18 145.0 14.4 134 115-265 37-191 (239)
435 KOG0601 Cyclin-dependent kinas 99.3 8.9E-13 1.9E-17 153.0 5.5 195 109-314 114-328 (524)
436 KOG0606 Microtubule-associated 99.3 1.5E-12 3.3E-17 157.6 2.1 262 107-459 802-1101(1205)
437 cd05146 RIO3_euk RIO kinase fa 99.2 5E-11 1.1E-15 124.3 12.9 137 115-267 3-175 (197)
438 TIGR01982 UbiB 2-polyprenylphe 99.2 4.8E-11 1E-15 138.8 12.6 141 115-267 123-308 (437)
439 cd05151 ChoK Choline Kinase (C 99.2 4.4E-11 9.6E-16 119.4 10.6 127 114-264 3-135 (170)
440 PRK04750 ubiB putative ubiquin 99.2 1.2E-11 2.6E-16 146.3 6.5 149 109-268 120-316 (537)
441 KOG1243 Protein kinase [Genera 99.1 4.1E-10 8.9E-15 132.3 12.3 165 127-309 30-199 (690)
442 KOG0601 Cyclin-dependent kinas 99.1 5.3E-11 1.2E-15 138.4 3.6 197 108-313 264-466 (524)
443 KOG1266 Protein kinase [Signal 99.1 2.6E-10 5.7E-15 124.0 8.4 138 170-310 125-279 (458)
444 KOG3087 Serine/threonine prote 99.1 2.6E-09 5.7E-14 109.0 15.0 144 113-265 11-165 (229)
445 cd05154 ACAD10_11_like Acyl-Co 99.0 3.5E-09 7.5E-14 109.8 11.0 141 115-265 4-206 (223)
446 COG3642 Mn2+-dependent serine/ 98.9 1.3E-08 2.7E-13 104.4 13.0 129 115-265 2-140 (204)
447 PRK15123 lipopolysaccharide co 98.9 4.3E-08 9.2E-13 107.3 15.9 127 133-264 44-193 (268)
448 PF01163 RIO1: RIO1 family; I 98.8 1.8E-08 3.8E-13 104.7 9.7 127 124-267 1-157 (188)
449 KOG3741 Poly(A) ribonuclease s 98.7 2.7E-07 5.8E-12 106.2 16.2 165 122-310 289-473 (655)
450 KOG2137 Protein kinase [Signal 98.6 1.3E-08 2.8E-13 120.4 1.3 93 221-316 107-213 (700)
451 PF06293 Kdo: Lipopolysacchari 98.5 4.2E-07 9.2E-12 95.4 11.3 109 150-265 56-170 (206)
452 PRK09902 hypothetical protein; 98.4 3.6E-06 7.8E-11 88.8 13.4 138 118-264 27-178 (216)
453 COG0478 RIO-like serine/threon 98.3 2.2E-06 4.8E-11 92.7 9.5 138 111-267 93-253 (304)
454 COG1718 RIO1 Serine/threonine 98.2 7.5E-06 1.6E-10 87.9 11.7 137 115-268 54-218 (268)
455 COG4248 Uncharacterized protei 98.2 7.4E-06 1.6E-10 92.5 11.8 190 113-316 15-225 (637)
456 PF01636 APH: Phosphotransfera 98.2 4.6E-05 1E-09 79.1 15.4 75 114-196 2-79 (239)
457 COG0661 AarF Predicted unusual 98.1 1.4E-05 3.1E-10 94.7 11.5 145 115-268 131-317 (517)
458 PF06176 WaaY: Lipopolysacchar 98.1 3.6E-05 7.9E-10 81.7 13.1 137 108-264 30-182 (229)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.1 5.2E-05 1.1E-09 81.0 14.0 73 115-197 7-79 (226)
460 KOG0576 Mitogen-activated prot 98.1 2.5E-07 5.3E-12 108.6 -4.3 185 109-314 242-431 (829)
461 PF10707 YrbL-PhoP_reg: PhoP r 98.0 9.9E-05 2.2E-09 77.5 14.4 134 115-259 7-165 (199)
462 cd05150 APH Aminoglycoside 3'- 97.9 9.3E-05 2E-09 79.1 13.0 72 116-197 5-77 (244)
463 PF13095 FTA2: Kinetochore Sim 97.9 0.0001 2.2E-09 77.5 12.0 127 109-263 37-206 (207)
464 KOG1235 Predicted unusual prot 97.9 6.8E-05 1.5E-09 89.0 11.4 147 115-269 167-358 (538)
465 PLN02876 acyl-CoA dehydrogenas 97.7 0.00035 7.7E-09 88.0 14.3 80 114-197 43-129 (822)
466 cd05157 ETNK_euk Ethanolamine 97.5 0.0012 2.5E-08 70.1 13.7 73 114-196 3-76 (235)
467 KOG1035 eIF-2alpha kinase GCN2 97.5 0.0012 2.6E-08 83.0 14.9 139 170-310 240-389 (1351)
468 cd05155 APH_ChoK_like_1 Unchar 97.5 0.00066 1.4E-08 72.4 10.8 72 115-196 3-78 (235)
469 COG2112 Predicted Ser/Thr prot 97.5 0.0004 8.6E-09 71.4 8.5 132 109-265 22-155 (201)
470 PRK09550 mtnK methylthioribose 97.3 0.0053 1.1E-07 71.2 15.5 77 114-196 31-115 (401)
471 KOG2270 Serine/threonine prote 97.2 0.0022 4.8E-08 72.4 11.4 139 113-268 148-316 (520)
472 cd05156 ChoK_euk Choline Kinas 97.1 0.0029 6.3E-08 69.9 10.6 73 114-196 3-81 (302)
473 TIGR02721 ycfN_thiK thiamine k 97.1 0.0019 4.1E-08 69.7 8.8 132 117-264 4-174 (256)
474 cd05153 HomoserineK_II Homoser 97.1 0.0033 7.1E-08 69.1 10.8 139 114-264 19-204 (296)
475 PRK05231 homoserine kinase; Pr 97.0 0.0083 1.8E-07 66.8 14.0 78 114-197 27-107 (319)
476 KOG1093 Predicted protein kina 96.8 0.0034 7.5E-08 73.4 8.3 173 150-456 27-200 (725)
477 TIGR00938 thrB_alt homoserine 96.7 0.023 5E-07 63.2 13.7 142 112-264 25-216 (307)
478 KOG2268 Serine/threonine prote 96.7 0.0014 3E-08 73.1 3.6 134 110-264 93-250 (465)
479 PLN02236 choline kinase 96.6 0.013 2.9E-07 66.5 11.5 138 115-264 42-230 (344)
480 PLN02421 phosphotransferase, a 96.6 0.014 3.1E-07 65.9 11.3 72 115-196 20-94 (330)
481 PF12260 PIP49_C: Protein-kina 96.4 0.0063 1.4E-07 63.4 6.8 100 154-266 8-112 (188)
482 TIGR01767 MTRK 5-methylthiorib 96.1 0.048 1E-06 62.4 12.1 73 116-195 2-83 (370)
483 cd05152 MPH2' Macrolide 2'-Pho 95.8 0.049 1.1E-06 60.1 10.2 46 117-164 19-64 (276)
484 PF01633 Choline_kinase: Choli 95.7 0.031 6.6E-07 58.7 7.9 31 232-264 143-173 (211)
485 TIGR02906 spore_CotS spore coa 95.6 0.19 4.2E-06 55.4 14.2 63 124-196 11-79 (313)
486 PRK10593 hypothetical protein; 95.5 0.078 1.7E-06 59.1 10.3 107 112-232 17-127 (297)
487 PRK11768 serine/threonine prot 95.4 0.21 4.5E-06 56.4 13.7 70 121-196 37-111 (325)
488 PF03881 Fructosamin_kin: Fruc 95.4 0.15 3.1E-06 56.9 12.1 76 112-195 20-95 (288)
489 KOG1826 Ras GTPase activating 95.3 0.0056 1.2E-07 78.8 0.7 141 170-313 1287-1440(2724)
490 PRK12396 5-methylribose kinase 95.3 0.13 2.8E-06 59.7 11.5 75 114-195 34-116 (409)
491 PTZ00384 choline kinase; Provi 95.0 0.21 4.5E-06 57.9 12.4 74 113-196 54-133 (383)
492 PLN02756 S-methyl-5-thioribose 94.9 0.29 6.3E-06 57.1 12.9 76 113-196 36-119 (418)
493 COG3173 Predicted aminoglycosi 94.5 0.35 7.6E-06 54.7 12.0 76 113-196 29-109 (321)
494 COG2334 Putative homoserine ki 94.4 0.2 4.3E-06 56.9 10.0 141 116-264 33-227 (331)
495 PRK06148 hypothetical protein; 93.9 0.66 1.4E-05 60.3 14.4 80 115-197 31-118 (1013)
496 TIGR02904 spore_ysxE spore coa 93.7 0.65 1.4E-05 51.8 12.4 30 233-265 197-226 (309)
497 PTZ00296 choline kinase; Provi 93.3 0.56 1.2E-05 55.4 11.4 74 113-196 109-190 (442)
498 PF02958 EcKinase: Ecdysteroid 92.7 0.43 9.4E-06 52.5 8.9 78 118-195 2-99 (294)
499 PF07387 Seadorna_VP7: Seadorn 91.6 0.64 1.4E-05 50.0 8.0 114 120-263 73-190 (308)
500 KOG1236 Predicted unusual prot 91.5 0.43 9.2E-06 55.3 7.0 59 187-248 320-380 (565)
No 1
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.1e-63 Score=569.69 Aligned_cols=397 Identities=46% Similarity=0.754 Sum_probs=334.0
Q ss_pred ccchhhHhhhhhHHHHhhhcCCCcccccccCCCcccCCCCccccCCCccCCCCcceEeeceeeeccccCCceEEEEEecc
Q 002401 40 VRKPLVVRLTKDIVETYQICNPLFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILAVNLVLVNAETQRRYIVKDLLGH 119 (927)
Q Consensus 40 ~~~~~~~~Lt~~i~~~y~~~~p~~~~~~~~~p~r~lt~ps~~~~n~g~d~~~~d~~i~~~~~l~~~~~~~rY~i~~~LG~ 119 (927)
.+...+...+..+.++|++|+..+.+....++++..+.+.......++|+.+++|++..++.+. .+|.|++.||+
T Consensus 122 ~~~~~~~~~~~s~~e~~ei~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~dY~~v~~d~i~-----~rY~V~e~LGk 196 (586)
T KOG0667|consen 122 SQASPLYKHSLSLIETYEIINYPEVYFVGLNAKKVLTFPSEGINTKNFDDEDGDYQLVVNDHIA-----YRYEVLEVLGK 196 (586)
T ss_pred hhhhhhhccccchhhhhhccChHHhhhhccccccccCCCcccccCCCCCCCCCceeEEecceeE-----EEEEEEEEecc
Confidence 3445667777788999999999999999999999999999988888899999999999999998 59999999999
Q ss_pred CCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecccchhH
Q 002401 120 GTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLY 199 (927)
Q Consensus 120 GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL~ 199 (927)
|+||+|.+|.|..|++.||||++++++.+..+...|+.||..|++ .+..+..|||+++|+|...+|+|||+|+++.+|+
T Consensus 197 GtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~-~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~NLY 275 (586)
T KOG0667|consen 197 GSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNK-HDPDDKYNIVRMLDYFYFRNHLCIVFELLSTNLY 275 (586)
T ss_pred cccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhc-cCCCCCeeEEEeeeccccccceeeeehhhhhhHH
Confidence 999999999999999999999999999999999999999999986 5677788999999999999999999999999999
Q ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccceeeccCCCC
Q 002401 200 ELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYY 279 (927)
Q Consensus 200 dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~~~~gT~~Y 279 (927)
++++.+++.+|+...++.|+.|||.||.+||+.+|||+|||||||||..- ....|||+|||+||......++++++++|
T Consensus 276 ellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~-~r~~vKVIDFGSSc~~~q~vytYiQSRfY 354 (586)
T KOG0667|consen 276 ELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP-KRSRIKVIDFGSSCFESQRVYTYIQSRFY 354 (586)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC-CcCceeEEecccccccCCcceeeeecccc
Confidence 99999999999999999999999999999999999999999999999754 44599999999999999999999999999
Q ss_pred CCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCC
Q 002401 280 RSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIEN 359 (927)
Q Consensus 280 ~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~ 359 (927)
+|||+|++.+|+.++||||||||++||++|.++|+|+++.|++..|++++| .||.+|+..+++..+||++....+....
T Consensus 355 RAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG-~Pp~~mL~~~~~~~kff~~~~~~~~~~~ 433 (586)
T KOG0667|consen 355 RAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLG-LPPPKMLDTAKKAHKFFTSLKGFPRLCV 433 (586)
T ss_pred ccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhC-CCCHHHHHhccccceehhccCCceeeee
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999998421221111
Q ss_pred CccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcC
Q 002401 360 GEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPA 439 (927)
Q Consensus 360 ~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~ 439 (927)
.. +.....+....+.++....++.. .| .....-+.......+..|+|||++||++||.
T Consensus 434 ~~-----------------~~~~~~k~~~~~~~~~~~~~~~~---~P--~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 434 ET-----------------SAPRGTKSPEVRKYYRKARLERR---GP--PGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred ee-----------------cccccccchhhhhhhhhhccccc---CC--CCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 00 00000011111111111111110 11 0111111122234567899999999999999
Q ss_pred CCCCHHHHHhCCCcCCCCCCCCCCCCC
Q 002401 440 KRWSPFQASRHPFVTGEPFTCPYQPPP 466 (927)
Q Consensus 440 kRpTA~EaLqHPwf~~~~~~~~~~~~p 466 (927)
+|+|+.|||+||||++..+......+.
T Consensus 492 ~R~tp~qal~Hpfl~~~~~~~~~~~~~ 518 (586)
T KOG0667|consen 492 ERITPAQALNHPFLTGTSLERRNQSPL 518 (586)
T ss_pred hcCCHHHHhcCcccccccccccCCCCc
Confidence 999999999999999887766655544
No 2
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-52 Score=464.29 Aligned_cols=284 Identities=36% Similarity=0.560 Sum_probs=239.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHH--HHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ--ALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~--~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.++|.++++||.|+||.||+|+.+.+++.||||.++++-...++ -++|++.|++|+ .|||||+|++++.+.+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln------~hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN------PHPNIIKLKEVIRDND 82 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC------CCCcchhhHHHhhccC
Confidence 37999999999999999999999999999999999976544443 467999999995 3999999999999988
Q ss_pred -eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 -HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 -~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
++|+|||||+.+|+++++.+ .+.|++..++.|++||++||+|+|++|+.||||||||||+. ....|||+|||+|+
T Consensus 83 ~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 83 RILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAR 158 (538)
T ss_pred ceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEeccccccc
Confidence 99999999999999999988 57899999999999999999999999999999999999994 46789999999998
Q ss_pred cccc--cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TEDR--TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~~--~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... ..+.++.|+||+|||+++.. -|+.++||||+|||++||.+-+++|+|.++.|++.+|++++| .|.+..+.+.
T Consensus 159 ev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLG-tP~~~~~~eg 237 (538)
T KOG0661|consen 159 EVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLG-TPDKDSWPEG 237 (538)
T ss_pred ccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhC-CCccccchhH
Confidence 7643 34567999999999999765 799999999999999999999999999999999999999999 7765544432
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
... ..... +.-.++....+..++..
T Consensus 238 ~~L----------------------------a~~mn----------f~~P~~~~~~l~~L~p~----------------- 262 (538)
T KOG0661|consen 238 YNL----------------------------ASAMN----------FRFPQVKPSPLKDLLPN----------------- 262 (538)
T ss_pred HHH----------------------------HHHhc----------cCCCcCCCCChHHhCcc-----------------
Confidence 111 11000 01112333445555433
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
++.++.+||.+||.|||++||||.|+|+||||+...
T Consensus 263 ~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 263 ASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred cCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 456899999999999999999999999999998643
No 3
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.5e-51 Score=429.71 Aligned_cols=289 Identities=33% Similarity=0.563 Sum_probs=243.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|..+++||+|.||.||+|++.++++.||||+|+..+ .....+++||+.|+++ .|+||+.++++|-+.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-------~h~nIi~LiD~F~~~~ 74 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-------KHPNIIELIDVFPHKS 74 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-------cCcchhhhhhhccCCC
Confidence 58999999999999999999999999999999998542 3356789999999999 5899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+.||+|||+.+|..+++... ..++...++.++.++++||+|||++.|+||||||.|+|++ .++.+||+|||+|+.
T Consensus 75 ~l~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 75 NLSLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARF 150 (318)
T ss_pred ceEEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhc
Confidence 999999999999999998765 5699999999999999999999999999999999999994 779999999999986
Q ss_pred cccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... ....+-|+||+|||++++. .|+..+||||+|||++||+.|.+.|+|.++.|++..|.+.+| .|.+..|++.
T Consensus 151 f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LG-TP~~~~WP~~ 229 (318)
T KOG0659|consen 151 FGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALG-TPTPDQWPEM 229 (318)
T ss_pred cCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcC-CCCcccCccc
Confidence 5433 2233789999999999987 799999999999999999999999999999999999999999 7777666654
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
....+|.+-. .++...+..++ ..
T Consensus 230 ~~lpdY~~~~----------------------------------------~~P~~~~~~lf-----------------~a 252 (318)
T KOG0659|consen 230 TSLPDYVKIQ----------------------------------------QFPKPPLNNLF-----------------PA 252 (318)
T ss_pred cccccHHHHh----------------------------------------cCCCCcccccc-----------------cc
Confidence 4333322211 01111111111 12
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCCCCCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPP 466 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~~~~~~p 466 (927)
++.+++|||.+||.+||.+|+||.|+|+|+||+..|.+++....|
T Consensus 253 as~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp 297 (318)
T KOG0659|consen 253 ASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLP 297 (318)
T ss_pred ccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCc
Confidence 345779999999999999999999999999999987766544433
No 4
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.7e-51 Score=434.85 Aligned_cols=281 Identities=32% Similarity=0.593 Sum_probs=237.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|+.+.++|+|+||+||+|+++.||+.||||++... +...+.+++||++|++|+ |+|+|.++++|..+.
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk-------H~NLVnLiEVFrrkr 74 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK-------HENLVNLIEVFRRKR 74 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc-------cchHHHHHHHHHhcc
Confidence 5789999999999999999999999999999999753 456678899999999994 899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.++||||||+.++++.+.... .+++.+.++++++|++.|+.|||+++|||||||||||||+ ..+.+||||||+|+.
T Consensus 75 klhLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR~ 150 (396)
T KOG0593|consen 75 KLHLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFART 150 (396)
T ss_pred eeEEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhHh
Confidence 999999999999988888775 6799999999999999999999999999999999999996 679999999999986
Q ss_pred cc---ccceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 266 ED---RTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 266 ~~---~~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.. +.-+.++.|+||+|||++.+ .+|+..+||||+||++.||++|.++|++.++.|++..|+..+|..+|..+.-
T Consensus 151 L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~i-- 228 (396)
T KOG0593|consen 151 LSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSI-- 228 (396)
T ss_pred hcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHH--
Confidence 54 33455788999999999998 5899999999999999999999999999999999999999999877766432
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
-..+.||..+. ++. ...++.+-..|| .
T Consensus 229 F~~N~~F~Gv~-lP~--------------------------------------~~~~epLe~k~p--------------~ 255 (396)
T KOG0593|consen 229 FSSNPFFHGVR-LPE--------------------------------------PEHPEPLERKYP--------------K 255 (396)
T ss_pred hccCCceeeee-cCC--------------------------------------CCCccchhhhcc--------------c
Confidence 11222222221 000 001111112222 3
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
++..++||+++||..||++|++.+|+|.|+||.+
T Consensus 256 ~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 256 ISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred chHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 4557899999999999999999999999999965
No 5
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-50 Score=448.33 Aligned_cols=292 Identities=30% Similarity=0.543 Sum_probs=243.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.+.|+.+++||+|+||.||+|++..+++.||+|+++.+ ........+||.||++| +||||++|.+...+.
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-------~HpNIikL~eivt~~ 188 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-------DHPNIIKLEEIVTSK 188 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-------CCCcccceeeEEEec
Confidence 47899999999999999999999999999999999853 45666788999999999 699999999999877
Q ss_pred --ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 185 --RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 185 --~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
..+|||||||+.+|..++.... -.|++.+|+.|++||++||+|||++||+|||||..|||| +..+.+||+|||+
T Consensus 189 ~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGL 264 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGL 264 (560)
T ss_pred CCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccc
Confidence 6899999999999998887653 469999999999999999999999999999999999999 5789999999999
Q ss_pred cccccc----cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 263 ACTEDR----TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 263 A~~~~~----~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
|+.... ..+..+-|+||+|||+|++. .|+.++||||+||||.||++|+++|+|.++.+++.+|.+.+| .|.+..
T Consensus 265 Ar~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG-SP~e~~ 343 (560)
T KOG0600|consen 265 ARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG-SPTEDY 343 (560)
T ss_pred eeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC-CCChhc
Confidence 984332 24456789999999999997 799999999999999999999999999999999999999999 776665
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
|+ ..+.. ++. .|+. ... + .+.+.+.+..
T Consensus 344 W~-~~kLP-~~~-------------------~~kp-------------~~~----y-~r~l~E~~~~------------- 371 (560)
T KOG0600|consen 344 WP-VSKLP-HAT-------------------IFKP-------------QQP----Y-KRRLRETFKD------------- 371 (560)
T ss_pred cc-cccCC-ccc-------------------ccCC-------------CCc----c-cchHHHHhcc-------------
Confidence 54 11111 000 0000 000 0 1123333333
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCCCCCCCCC
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPE 467 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~~~~~~p~ 467 (927)
++..+++||..||.+||.+|.||.+||+|+||+.++++|....+|.
T Consensus 372 ----~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~ 417 (560)
T KOG0600|consen 372 ----FPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPK 417 (560)
T ss_pred ----CCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCCC
Confidence 3467899999999999999999999999999999998887655554
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-50 Score=439.80 Aligned_cols=262 Identities=29% Similarity=0.505 Sum_probs=219.9
Q ss_pred ccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh--------hHHHHHHHHHHHHHHhhhcCCCCCCceeEE
Q 002401 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA--------YYQQALVEVSILTTLNKKYDREDKHHIVRI 177 (927)
Q Consensus 106 ~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~--------~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl 177 (927)
...+.|.+.+.||+|+||.|-+|..+.|++.||||++++... ......+|++||++| +|||||++
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-------~HP~IV~~ 241 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-------SHPNIVRI 241 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-------CCCCEEEE
Confidence 346899999999999999999999999999999999985421 223457899999999 59999999
Q ss_pred EEEEeecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEE
Q 002401 178 YEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 178 ~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IK 256 (927)
+++|...+..||||||++ |+|.+.+..+. .+.+...+.+++|||.||.|||+.||+||||||+|||+..+.++..+|
T Consensus 242 ~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llK 319 (475)
T KOG0615|consen 242 KDFFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLK 319 (475)
T ss_pred eeeeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEE
Confidence 999999999999999998 68999887764 588999999999999999999999999999999999998777889999
Q ss_pred EeecCCcccc--cccceeeccCCCCCCcchhcCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Q 002401 257 IIDFGSACTE--DRTVYSYIQSRYYRSPEVLLGYQ---YTTAIDMWSFGCIVAELFLGLPLFPGASEFD-LLRRMIRILG 330 (927)
Q Consensus 257 L~DFGlA~~~--~~~~~~~~gT~~Y~APEvl~~~~---ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d-~l~~I~~~lG 330 (927)
|+|||+|+.. ...+.+.|||+.|.|||++.... +..++||||||||||-+|+|.+||.+..... +.++|.+ |
T Consensus 320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~--G 397 (475)
T KOG0615|consen 320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK--G 397 (475)
T ss_pred ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc--C
Confidence 9999999876 45567889999999999998764 3358999999999999999999997654322 3333322 0
Q ss_pred CCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCC
Q 002401 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN 410 (927)
Q Consensus 331 ~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ 410 (927)
.|. |.
T Consensus 398 --------------------------------------~y~---------------------f~---------------- 402 (475)
T KOG0615|consen 398 --------------------------------------RYA---------------------FG---------------- 402 (475)
T ss_pred --------------------------------------ccc---------------------cc----------------
Confidence 000 00
Q ss_pred CChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 411 ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
-..+..++++++|||.+||.+||++|+|+.|||+||||+..+.
T Consensus 403 -----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 403 -----PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred -----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 0123456678999999999999999999999999999998764
No 7
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-49 Score=424.16 Aligned_cols=299 Identities=29% Similarity=0.472 Sum_probs=245.3
Q ss_pred ccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 106 ~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
...+.|+.+.+|++|+||.||+|+|+.|++.||+|.++-+. .+--..++||.+|.++ .|||||.+.++..
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~-------~H~NIV~vkEVVv 145 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA-------RHPNIVEVKEVVV 145 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc-------CCCCeeeeEEEEe
Confidence 34579999999999999999999999999999999998543 3334678999999998 4899999999987
Q ss_pred ec--ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 183 CQ--RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 183 ~~--~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
-. +.+|||||||+.+|..++..-. .+|...+++.++.|+|+||+|||.+.|+|||||++|+|+ ...|.+||+||
T Consensus 146 G~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDF 221 (419)
T KOG0663|consen 146 GSNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADF 221 (419)
T ss_pred ccccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEeccc
Confidence 54 5799999999999999887765 679999999999999999999999999999999999999 47799999999
Q ss_pred CCccccccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 261 GSACTEDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 261 GlA~~~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
|+|+..+.. .+..+-|.||+|||++.+. .|+.++||||+|||+.||+++++.|+|.++.+++.+|.+.+| .|.+.
T Consensus 222 GLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llG-tPte~ 300 (419)
T KOG0663|consen 222 GLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLG-TPSEA 300 (419)
T ss_pred chhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhC-CCccc
Confidence 999987765 5556789999999999987 699999999999999999999999999999999999999999 88888
Q ss_pred HHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 337 ~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
+|+...... ....+++. ......|.. .|+..
T Consensus 301 iwpg~~~lp--------------------~~k~~~f~------------------~~pyn~lr~---kF~~~-------- 331 (419)
T KOG0663|consen 301 IWPGYSELP--------------------AVKKMTFS------------------EHPYNNLRK---KFGAL-------- 331 (419)
T ss_pred cCCCccccc--------------------hhhccccC------------------CCCchhhhh---hcccc--------
Confidence 776332211 00000000 000111111 12210
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCCCCCCCCCCC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPETP 469 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~~~~~~p~~p 469 (927)
..++...|||.++|.+||.+|+||+|+|+|.||.+.|.+++..-.|..|
T Consensus 332 ----~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P 380 (419)
T KOG0663|consen 332 ----SLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWP 380 (419)
T ss_pred ----ccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCc
Confidence 1346788999999999999999999999999999998887655544443
No 8
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-49 Score=426.76 Aligned_cols=281 Identities=33% Similarity=0.601 Sum_probs=237.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
..+|..++.||+|+||.|+.|.++.+++.||||++.+ .....++..+|+++|+.+ .|+||+.+++++...
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-------~HeNIi~l~di~~p~ 93 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-------RHENIIGLLDIFRPP 93 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-------cCCCcceEEeecccc
Confidence 3678888999999999999999999999999999973 456678899999999999 489999999999762
Q ss_pred -----ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 185 -----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 185 -----~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
+.+|+|+|+|+.+|.++++... .++++.++.+++|||+||.|+|+.+|+||||||.|||+ +.++.+||||
T Consensus 94 ~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~D 168 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICD 168 (359)
T ss_pred cccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEecc
Confidence 4799999999999999998864 59999999999999999999999999999999999999 4778899999
Q ss_pred cCCcccc-----cccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 260 FGSACTE-----DRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 260 FGlA~~~-----~~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
||+|+.. ....+.++.|+||+|||++... .|+.++||||+||||+||++|++.|+|.+..+++..|.+.+| .|
T Consensus 169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG-tP 247 (359)
T KOG0660|consen 169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG-TP 247 (359)
T ss_pred ccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC-CC
Confidence 9999876 3445778999999999999765 899999999999999999999999999999999999999999 66
Q ss_pred ChHHHHHhh--hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCC
Q 002401 334 PDYVLKEAK--NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL 411 (927)
Q Consensus 334 P~~~l~~~~--~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~l 411 (927)
+++.+.... +...|.+... ..+..++..+++
T Consensus 248 ~~e~l~~i~s~~ar~yi~slp---------------------------------------~~p~~~f~~~fp-------- 280 (359)
T KOG0660|consen 248 SEEDLQKIRSEKARPYIKSLP---------------------------------------QIPKQPFSSIFP-------- 280 (359)
T ss_pred CHHHHHHhccHHHHHHHHhCC---------------------------------------CCCCCCHHHHcC--------
Confidence 666555332 1111222111 011223333333
Q ss_pred ChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 412 SMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 412 s~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.+++.++|||++||.+||.+|+|++|||+||||....
T Consensus 281 ---------~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 281 ---------NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred ---------CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 3457899999999999999999999999999998753
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-48 Score=444.81 Aligned_cols=260 Identities=28% Similarity=0.463 Sum_probs=228.2
Q ss_pred eceeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC----ChhhHHHHHHHHHHHHHHhhhcCCCCCCc
Q 002401 98 VNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDKHH 173 (927)
Q Consensus 98 ~~~~l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~----~~~~~~~~~~Ei~iL~~L~~~~~~~~Hpn 173 (927)
+++++.+... .+|+..+.||+|+|+.||++++..+|+.||+|++.+ +....+...+||+|.+.| .|||
T Consensus 8 ip~~i~D~~~-~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-------~Hpn 79 (592)
T KOG0575|consen 8 IPEVIEDPRS-KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-------KHPN 79 (592)
T ss_pred CCCeeecCCc-ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-------CCCc
Confidence 4455555555 899999999999999999999999999999999986 456677889999999999 5899
Q ss_pred eeEEEEEEeecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCC
Q 002401 174 IVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP 252 (927)
Q Consensus 174 IVrl~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~ 252 (927)
||+++++|++.+++|||+|+|. +.|.++++.. +.++|.+++.+++||+.||.|||+++|||||||..|||| +++
T Consensus 80 IV~f~~~FEDs~nVYivLELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~ 154 (592)
T KOG0575|consen 80 IVQFYHFFEDSNNVYIVLELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NEN 154 (592)
T ss_pred EEeeeeEeecCCceEEEEEecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCc
Confidence 9999999999999999999998 6788887743 579999999999999999999999999999999999999 467
Q ss_pred CeEEEeecCCccccc---ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q 002401 253 AEIKIIDFGSACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329 (927)
Q Consensus 253 g~IKL~DFGlA~~~~---~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~l 329 (927)
.+|||+|||+|.... +...+.|||+.|+|||++....++..+||||+|||||.||+|++||...+-.+.+.+|...-
T Consensus 155 ~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~ 234 (592)
T KOG0575|consen 155 MNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE 234 (592)
T ss_pred CcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC
Confidence 899999999997654 67788999999999999999999999999999999999999999998877777776665311
Q ss_pred CCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCC
Q 002401 330 GAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRK 409 (927)
Q Consensus 330 G~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~ 409 (927)
- .++
T Consensus 235 Y---------------------------------------------------------------------------~~P- 238 (592)
T KOG0575|consen 235 Y---------------------------------------------------------------------------SMP- 238 (592)
T ss_pred c---------------------------------------------------------------------------ccc-
Confidence 1 011
Q ss_pred CCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 410 NLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 410 ~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
..++.+++|||++||+.||.+|||+++||.|+||+..
T Consensus 239 ----------~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 239 ----------SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred ----------cccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 1345678999999999999999999999999999654
No 10
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-48 Score=425.28 Aligned_cols=323 Identities=36% Similarity=0.668 Sum_probs=270.6
Q ss_pred cCCCCcceEeeceeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcC
Q 002401 88 DNVNSDLILAVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYD 167 (927)
Q Consensus 88 d~~~~d~~i~~~~~l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~ 167 (927)
|+..+.++..++|.+. .+|+|+++||+|.||.|.+|.|.+++..||||++++-..+.+.++.|+++|+++++. +
T Consensus 73 dD~dGH~v~~~gD~l~-----~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~-D 146 (415)
T KOG0671|consen 73 DDKDGHYVYQVGDILT-----NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINES-D 146 (415)
T ss_pred CCCCceEEEEeccccc-----cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhc-C
Confidence 7778889999999885 799999999999999999999999999999999999888889999999999999753 3
Q ss_pred CCCCCceeEEEEEEeecceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEe
Q 002401 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLC 247 (927)
Q Consensus 168 ~~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~ 247 (927)
..+.-.+|++.++|...++.|||+|.++-+++++++.+....++...++.|.+||+++++|||+.+++|.||||||||+.
T Consensus 147 P~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfv 226 (415)
T KOG0671|consen 147 PNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFV 226 (415)
T ss_pred CCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEe
Confidence 33344589999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred ec-----------------CCCCeEEEeecCCcccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002401 248 TS-----------------VKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGL 310 (927)
Q Consensus 248 ~~-----------------~~~g~IKL~DFGlA~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~ 310 (927)
.+ .+...|||+|||.|....+.....+.|+.|+|||++++..++.++||||+||||+||+||.
T Consensus 227 ss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 227 SSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGE 306 (415)
T ss_pred ccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccc
Confidence 42 1245689999999999888888899999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCc
Q 002401 311 PLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK 390 (927)
Q Consensus 311 ~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~ 390 (927)
.+|.+.++.+.+..|..++| ++|..|+.+.. ..+||... .+++++........|.+.
T Consensus 307 ~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~-~~Kyf~~~----rldw~e~~~~~~~k~v~~----------------- 363 (415)
T KOG0671|consen 307 TLFQTHENLEHLAMMERILG-PIPSRMIKKTR-KEKYFRRG----RLDWPEVSSKGKSKYVFE----------------- 363 (415)
T ss_pred eecccCCcHHHHHHHHHhhC-CCcHHHhhhhh-hHhhhhcc----cccCccccccccchhhhc-----------------
Confidence 99999999999999999999 77888877654 45566554 233333333322222111
Q ss_pred ccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 391 ~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
..++|..++.. ......+|+|||++||++||.+|+|+.|||.||||+..
T Consensus 364 ---~ckpl~~~~~~--------------~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 364 ---PCKPLKKYMLQ--------------DDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred ---CCccHHHHhcc--------------CcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 01223332211 11223479999999999999999999999999999864
No 11
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-48 Score=421.72 Aligned_cols=301 Identities=34% Similarity=0.576 Sum_probs=244.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc---
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR--- 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~--- 185 (927)
-.|+-.+++|.|+||.||+|+..++++.||||++-.+.... -+|++||+.+ +|||||+|+-+|....
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l-------~HpNIV~L~~~f~~~~~~d 93 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKL-------DHPNIVRLLYFFSSSTESD 93 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhc-------CCcCeeeEEEEEEecCCCc
Confidence 47889999999999999999999999999999998765433 3799999977 6999999999887432
Q ss_pred --eeEEEEecccchhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 186 --HLCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 186 --~l~LVmEy~~GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
++.||||||+.+|.++++.. ....++.-.++.+++||++||+|||+.|||||||||.|||++ .+.+.+||||||
T Consensus 94 ~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFG 171 (364)
T KOG0658|consen 94 EVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFG 171 (364)
T ss_pred hhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCC
Confidence 57899999999999999863 234689999999999999999999999999999999999996 667999999999
Q ss_pred Cccc--ccccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 262 SACT--EDRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 262 lA~~--~~~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
+|+. .++....++.|++|+|||++.+. .|+.++||||+|||+.||+.|++.|+|++..+++..|++++| .|.++-+
T Consensus 172 SAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG-~Pt~e~I 250 (364)
T KOG0658|consen 172 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLG-TPTREDI 250 (364)
T ss_pred cceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhC-CCCHHHH
Confidence 9975 35566788999999999999997 799999999999999999999999999999999999999999 7776655
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
...+.... +...+. +....+.+++
T Consensus 251 ~~mn~~y~-----------------------------------~~~~p~-----ik~~~~~~~~---------------- 274 (364)
T KOG0658|consen 251 KSMNPNYT-----------------------------------EFKFPQ-----IKAHPWHKVF---------------- 274 (364)
T ss_pred hhcCcccc-----------------------------------cccCcc-----cccccceeec----------------
Confidence 43221100 000000 0011111100
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCCCCCCCCCCCCCCccCCcccc
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQPPPETPRVPVAQNFKVD 480 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~~~~~~p~~p~~p~~~~~~~~ 480 (927)
....++++.||+.++|+++|.+|.+|.|||.||||.+.+-+ ....+.....|..++++..
T Consensus 275 ~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~--~~~l~~g~~lp~lf~f~~~ 334 (364)
T KOG0658|consen 275 FKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP--NTKLPNGRPLPPLFNFKRA 334 (364)
T ss_pred ccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc--CccCcCCCcCCCccCchHH
Confidence 11244688999999999999999999999999999886433 4556666677877877665
No 12
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-47 Score=412.11 Aligned_cols=252 Identities=30% Similarity=0.495 Sum_probs=216.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEe--CChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc-
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR- 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik--~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~- 185 (927)
.+.+.++.||+|..|+||+|+++.|++.+|+|++. .+....+++.+|++|+++. +||+||++|+.|..++
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-------~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-------QSPYIVGFYGAFYSNGE 151 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-------CCCCeeeEeEEEEeCCc
Confidence 57778899999999999999999999999999994 4567788999999999998 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.++|+||||+ |+|.++++.. +.++|..+-+|+++|++||.|||+ ++||||||||+|||+ +..++|||||||.+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS 226 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVS 226 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEecccccc
Confidence 4999999999 5777777765 569999999999999999999995 999999999999999 47899999999999
Q ss_pred cccc-ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHHHhCCCCChHH
Q 002401 264 CTED-RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA-----SEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 264 ~~~~-~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~-----s~~d~l~~I~~~lG~~PP~~~ 337 (927)
.... ....+++||..|||||.+.+..|+.++||||||++|+||++|+.||... ...+++..|+. .+||.
T Consensus 227 ~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~---~ppP~-- 301 (364)
T KOG0581|consen 227 GILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD---EPPPR-- 301 (364)
T ss_pred HHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc---CCCCC--
Confidence 7643 4457889999999999999999999999999999999999999999764 33333333332 11110
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
.|
T Consensus 302 -------------------------------------------------------------------lP----------- 303 (364)
T KOG0581|consen 302 -------------------------------------------------------------------LP----------- 303 (364)
T ss_pred -------------------------------------------------------------------CC-----------
Confidence 00
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+..++++|++||..||+.||.+|+|++|+|+|||+++.
T Consensus 304 -~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 304 -EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred -cccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 01356789999999999999999999999999999975
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-46 Score=407.94 Aligned_cols=272 Identities=26% Similarity=0.460 Sum_probs=230.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.++|+++++||+|+||+|++++.+.+++.+|+|++++.. ...+....|..||.++ .||.||+++..|++
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-------~hPFiv~l~ysFQt 96 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-------KHPFIVKLIYSFQT 96 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-------CCCcEeeeEEeccc
Confidence 479999999999999999999999999999999998753 3456678899999987 59999999999999
Q ss_pred cceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+++|||+||+.| .|+-.|.+. +.++|..++.++.+|+.||.|||++|||||||||||||| +.+|.|+|+|||+
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL 171 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGL 171 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEecccc
Confidence 9999999999985 888777655 469999999999999999999999999999999999999 5889999999999
Q ss_pred ccc---ccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHH
Q 002401 263 ACT---EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 263 A~~---~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
++. .+....+.|||+.|||||++.+..|+.++|.|||||+||||++|.+||.+.+.....++|.+.-...+|
T Consensus 172 ~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p----- 246 (357)
T KOG0598|consen 172 CKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP----- 246 (357)
T ss_pred chhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC-----
Confidence 974 334556689999999999999999999999999999999999999999998887777777652110000
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
T Consensus 247 -------------------------------------------------------------------------------- 246 (357)
T KOG0598|consen 247 -------------------------------------------------------------------------------- 246 (357)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHhccccCcCCCC----CHHHHHhCCCcCCCCCCCCCCCCCCCCCCCccCC
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRW----SPFQASRHPFVTGEPFTCPYQPPPETPRVPVAQN 476 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRp----TA~EaLqHPwf~~~~~~~~~~~~p~~p~~p~~~~ 476 (927)
...+.+++|||+++|..||++|+ .++++-+||||.+..|..-......+|..|...+
T Consensus 247 ~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~ 307 (357)
T KOG0598|consen 247 GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTG 307 (357)
T ss_pred ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCC
Confidence 01235789999999999999996 7899999999999887654444444455554433
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-46 Score=418.17 Aligned_cols=260 Identities=29% Similarity=0.466 Sum_probs=228.0
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
..+|++.+.||+|+|++|++|+++.+++.||||++.+.- ...+.+.+|-.+|.+|. +||.|++|+-.|++
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~------~hPgivkLy~TFQD 145 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS------GHPGIVKLYFTFQD 145 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh------CCCCeEEEEEEeec
Confidence 479999999999999999999999999999999997542 22345667889999996 59999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
+..+|+|+||++ |+|+++|++. +.|++..++.++.||+.||+|||++|||||||||||||| +++++|||+|||.
T Consensus 146 ~~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGs 220 (604)
T KOG0592|consen 146 EESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGS 220 (604)
T ss_pred ccceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccc
Confidence 999999999998 7999999876 579999999999999999999999999999999999999 5889999999999
Q ss_pred cccccc----------------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002401 263 ACTEDR----------------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 263 A~~~~~----------------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~ 326 (927)
|+.... ....++||..|.+||+|.....+..+|||+||||||.|+.|.+||.+.++.-.+++|+
T Consensus 221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~ 300 (604)
T KOG0592|consen 221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ 300 (604)
T ss_pred cccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH
Confidence 953221 1145799999999999999999999999999999999999999999999999999988
Q ss_pred HHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCC
Q 002401 327 RILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYP 406 (927)
Q Consensus 327 ~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P 406 (927)
++.-..|
T Consensus 301 ~l~y~fp------------------------------------------------------------------------- 307 (604)
T KOG0592|consen 301 ALDYEFP------------------------------------------------------------------------- 307 (604)
T ss_pred HhcccCC-------------------------------------------------------------------------
Confidence 7533111
Q ss_pred CCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCCCCCC
Q 002401 407 YRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPYQP 464 (927)
Q Consensus 407 ~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~~~~~ 464 (927)
+ .+++.++|||+++|..||.+|+|++||.+||||.+..|..-++.
T Consensus 308 --~-----------~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw~~ 352 (604)
T KOG0592|consen 308 --E-----------GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENLWQQ 352 (604)
T ss_pred --C-----------CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhhhhc
Confidence 1 12247889999999999999999999999999999988765553
No 15
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.4e-46 Score=404.34 Aligned_cols=285 Identities=35% Similarity=0.595 Sum_probs=234.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh---hHHHHHHHHHHHHHHhhhcCCCCCCc-eeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA---YYQQALVEVSILTTLNKKYDREDKHH-IVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~---~~~~~~~Ei~iL~~L~~~~~~~~Hpn-IVrl~~~f~~~ 184 (927)
..|..+++||+|+||+||+|+++.+|+.||+|+++.+.. ....+++|+.+|+.|+ |+| |+++++++...
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~-------~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS-------HANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC-------CCcceEEEEeeeeec
Confidence 467788899999999999999999999999999986533 4567889999999995 556 99999999987
Q ss_pred c------eeEEEEecccchhHHHHHhhcc--CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEE
Q 002401 185 R------HLCICFELLDSNLYELIKINHF--RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 185 ~------~l~LVmEy~~GsL~dlL~~~~~--~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IK 256 (927)
+ .+++||||++.+|..++..... .+++...++.+++||+.||+|||+++|+||||||+||||+ ..+.+|
T Consensus 84 ~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lK 160 (323)
T KOG0594|consen 84 NNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLK 160 (323)
T ss_pred ccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEe
Confidence 7 8999999999999999988764 3688899999999999999999999999999999999995 589999
Q ss_pred EeecCCccccc---ccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 002401 257 IIDFGSACTED---RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332 (927)
Q Consensus 257 L~DFGlA~~~~---~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~ 332 (927)
|+|||+|+... ......+.|.+|+|||++.+. .|+..+||||+|||++||+++++.|++.++.+++.+|.+.+| +
T Consensus 161 laDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lG-t 239 (323)
T KOG0594|consen 161 LADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLG-T 239 (323)
T ss_pred eeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcC-C
Confidence 99999997543 234456889999999999998 799999999999999999999999999999999999999999 7
Q ss_pred CChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCC
Q 002401 333 PPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLS 412 (927)
Q Consensus 333 PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls 412 (927)
|.+..|+....... |.. .++.......+....
T Consensus 240 P~e~~Wp~v~~~~~-----------------------~k~------------------~f~~~~~~~~l~~~~------- 271 (323)
T KOG0594|consen 240 PNEKDWPGVSSLPD-----------------------YKA------------------PFPKWPGPKDLSSIL------- 271 (323)
T ss_pred CCccCCCCcccccc-----------------------ccc------------------cCcCCCCccchHHhc-------
Confidence 77665553221111 000 000111011111111
Q ss_pred hhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 413 MEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 413 ~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
...+....||+.+||++||.+|+||+.||.||||...+..
T Consensus 272 -------~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 272 -------PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred -------cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 1222578899999999999999999999999999986543
No 16
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-45 Score=402.80 Aligned_cols=319 Identities=34% Similarity=0.601 Sum_probs=270.7
Q ss_pred CcceEeeceeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhc-CCCC
Q 002401 92 SDLILAVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKY-DRED 170 (927)
Q Consensus 92 ~d~~i~~~~~l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~-~~~~ 170 (927)
+...+.+++++.+ .||.++++||.|.|++||+|.|....++||+|+.|....+.+.++.||++|++++..= ...+
T Consensus 65 GYHpV~IGD~F~~----gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~ 140 (590)
T KOG1290|consen 65 GYHPVRIGDVFNG----GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPG 140 (590)
T ss_pred CCceeeccccccC----ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 4556778887753 7999999999999999999999999999999999999899999999999999997531 1334
Q ss_pred CCceeEEEEEEeec----ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEE
Q 002401 171 KHHIVRIYEYFVCQ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENIL 245 (927)
Q Consensus 171 HpnIVrl~~~f~~~----~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNIL 245 (927)
..+||+|++.|... .|+|+|||+++.+|+.+|+...+++++...++.|++|||.||.|||. +||||.||||+|||
T Consensus 141 ~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvL 220 (590)
T KOG1290|consen 141 KKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVL 220 (590)
T ss_pred CceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceee
Confidence 56799999999875 48999999999999999999999999999999999999999999995 69999999999999
Q ss_pred Eeec----------------------------------------------------------------------------
Q 002401 246 LCTS---------------------------------------------------------------------------- 249 (927)
Q Consensus 246 L~~~---------------------------------------------------------------------------- 249 (927)
+...
T Consensus 221 l~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~ 300 (590)
T KOG1290|consen 221 LCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQ 300 (590)
T ss_pred eeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccc
Confidence 9320
Q ss_pred ------------------------------------C-------------------------------------------
Q 002401 250 ------------------------------------V------------------------------------------- 250 (927)
Q Consensus 250 ------------------------------------~------------------------------------------- 250 (927)
.
T Consensus 301 ~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v 380 (590)
T KOG1290|consen 301 ESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLV 380 (590)
T ss_pred cccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccccccccc
Confidence 0
Q ss_pred --------CCCeEEEeecCCcccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC------C
Q 002401 251 --------KPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG------A 316 (927)
Q Consensus 251 --------~~g~IKL~DFGlA~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g------~ 316 (927)
.+-+|||+|||.||-.....+..++|+.|+|||++.+..|++.+||||++||+|||+||..+|.- .
T Consensus 381 ~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~ 460 (590)
T KOG1290|consen 381 NPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYS 460 (590)
T ss_pred CCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCC
Confidence 00147999999999988888899999999999999999999999999999999999999999953 3
Q ss_pred CHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCccccccc
Q 002401 317 SEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHK 396 (927)
Q Consensus 317 s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~ 396 (927)
.+++.+..|++.+| ..|..+....+..+.||+..+.+.++..- ..|
T Consensus 461 rDEDHiA~i~ELLG-~iPr~ia~~Gk~SRdFFnr~G~LrhI~~L-------K~W-------------------------- 506 (590)
T KOG1290|consen 461 RDEDHIALIMELLG-KIPRKIALGGKYSRDFFNRRGELRHIRRL-------KPW-------------------------- 506 (590)
T ss_pred ccHHHHHHHHHHHh-hccHHHHhcCcchHhhhccccceeccccc-------CCC--------------------------
Confidence 47889999999999 77778888889999999999987776541 111
Q ss_pred chHHHHh-hCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 397 HLEEIVT-NYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 397 ~L~~il~-~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
+|.+++. .|-+. .....+|.|||.-||+++|+||+||.++|+||||...+.+
T Consensus 507 pL~~VL~eKY~~s-----------~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 507 PLYEVLIEKYEWS-----------EEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred cHHHHHHHHhCCC-----------HHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence 2333332 33221 1234589999999999999999999999999999976543
No 17
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.5e-46 Score=417.68 Aligned_cols=340 Identities=33% Similarity=0.567 Sum_probs=282.6
Q ss_pred ccCCCccCCCCcceEeeceeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHH
Q 002401 82 VLNDGYDNVNSDLILAVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTT 161 (927)
Q Consensus 82 ~~n~g~d~~~~d~~i~~~~~l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~ 161 (927)
.+.++||+..++|.+.++++|. .+|.+....|+|-|++|.+|.|...+..||||||.+.+...+.-+.|++||++
T Consensus 410 ~L~DNWdDaEGYYrv~igE~LD-----~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkK 484 (752)
T KOG0670|consen 410 GLQDNWDDAEGYYRVRIGELLD-----SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKK 484 (752)
T ss_pred ccccCcccccceEEEehhhhhc-----ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHH
Confidence 4568899999999999999987 79999999999999999999999999999999999999888999999999999
Q ss_pred HhhhcCCCCCCceeEEEEEEeecceeEEEEecccchhHHHHHhhc-cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCC
Q 002401 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLK 240 (927)
Q Consensus 162 L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL~dlL~~~~-~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLK 240 (927)
|+.. +.++..|+++|+-.|.+.+|+|||||.+.-+|.++|+... .-+|....++.++.||+.||..|-.+||+|+|||
T Consensus 485 L~~A-D~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIK 563 (752)
T KOG0670|consen 485 LNDA-DPEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIK 563 (752)
T ss_pred hhcc-CchhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccC
Confidence 9764 6777889999999999999999999999999999998864 3468999999999999999999999999999999
Q ss_pred CCCEEEeecCCCCeEEEeecCCccccc-ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002401 241 PENILLCTSVKPAEIKIIDFGSACTED-RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEF 319 (927)
Q Consensus 241 PeNILL~~~~~~g~IKL~DFGlA~~~~-~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~ 319 (927)
|+||||+ .....+||||||.|.... ...+.+..+++|+|||++++.+|+...|+||+||+||||.||+.+|+|.+..
T Consensus 564 PDNiLVN--E~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 564 PDNILVN--ESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred ccceEec--cCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 9999996 556789999999997654 4566778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchH
Q 002401 320 DLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLE 399 (927)
Q Consensus 320 d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~ 399 (927)
+++..++++.| ..|..|+.........|+...++..++-..++.... ..... ..=+.+.|.
T Consensus 642 ~MLrl~me~KG-k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~----------------~~vm~--~vkPtkdl~ 702 (752)
T KOG0670|consen 642 QMLRLFMELKG-KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREK----------------RTVMV--NVKPTKDLG 702 (752)
T ss_pred HHHHHHHHhcC-CCcHHHhhhcchhhhhcccccceEEEecccccccee----------------EEEec--ccCcchhHH
Confidence 99999999999 888888888877777776655443333322221110 00000 000112344
Q ss_pred HHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 400 EIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 400 ~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
..+...+ +++.+ +..+-.+|.|||.+||.+||++|+|+.|||+||||++
T Consensus 703 s~l~~~q---~~~de----q~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 703 SELIAVQ---RLPDE----QPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHhccC---CCCch----hHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 4333322 22222 2345568999999999999999999999999999985
No 18
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.8e-44 Score=416.59 Aligned_cols=302 Identities=31% Similarity=0.555 Sum_probs=233.8
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-ce
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-RH 186 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-~~ 186 (927)
.++|+++++||+|+||+||+|++..+++.||||+++...........|+++++.+++. ...+|.+|++++++|..+ .+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQA-DPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhc-CcccCcceeeeEEEEEcCCce
Confidence 4799999999999999999999999999999999987655556677899999998653 334577899999998765 58
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecC-------------CC
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSV-------------KP 252 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~-------------~~ 252 (927)
+|||||+++++|++++... ..+++..++.|+.||+.||+|||+ .|||||||||+|||++.+. +.
T Consensus 207 ~~iv~~~~g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 207 MCIVMPKYGPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEEEeccCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 9999999999999988764 369999999999999999999997 5999999999999996432 12
Q ss_pred CeEEEeecCCcccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 002401 253 AEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332 (927)
Q Consensus 253 g~IKL~DFGlA~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~ 332 (927)
..+||+|||.++.........++|+.|+|||++.+..|+.++||||||||||||++|++||.+.+..+.+..|.+.+| .
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g-~ 363 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLG-R 363 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcC-C
Confidence 369999999987665555667899999999999999999999999999999999999999999999999999999999 4
Q ss_pred CChHHHHHhh--hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCC
Q 002401 333 PPDYVLKEAK--NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN 410 (927)
Q Consensus 333 PP~~~l~~~~--~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ 410 (927)
+|..+..... ....+++....+ +..+..+.+..+....+.
T Consensus 364 ~p~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~--- 405 (467)
T PTZ00284 364 LPSEWAGRCGTEEARLLYNSAGQL-----------------------------------RPCTDPKHLARIARARPV--- 405 (467)
T ss_pred CCHHHHhhccchhHHHHhhhcccc-----------------------------------cccCCHHHHHhhhcccch---
Confidence 4544433211 111122211100 000001111111110000
Q ss_pred CChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 411 ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
. ....+..++|||++||++||++|+|++|||+||||.....
T Consensus 406 ---~----~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 406 ---R----EVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred ---h----hhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 0 0112357899999999999999999999999999997543
No 19
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.3e-44 Score=406.88 Aligned_cols=263 Identities=26% Similarity=0.485 Sum_probs=220.5
Q ss_pred cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~----~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
..++|++++.||+|+||.||+|+.+.||+++|+|++++... ..+.++.|-.||... +.++||+||..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-------ds~~vVKLyYsFQ 211 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-------DSPWVVKLYYSFQ 211 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-------CCCcEEEEEEEec
Confidence 34899999999999999999999999999999999997542 334455666666664 6899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
+.+++||||||++ |++..+|... ..|++..++.++.+++.||+.||+.|+|||||||+|+|| +..|+|||+|||
T Consensus 212 D~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFG 286 (550)
T KOG0605|consen 212 DKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFG 286 (550)
T ss_pred CCCeeEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeecccc
Confidence 9999999999998 5788887765 479999999999999999999999999999999999999 588999999999
Q ss_pred Ccccc------c------------------c-c-------------------------ceeeccCCCCCCcchhcCCCCC
Q 002401 262 SACTE------D------------------R-T-------------------------VYSYIQSRYYRSPEVLLGYQYT 291 (927)
Q Consensus 262 lA~~~------~------------------~-~-------------------------~~~~~gT~~Y~APEvl~~~~ys 291 (927)
++.-. + + . ....+||+.|+|||++.+..|+
T Consensus 287 Ls~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~ 366 (550)
T KOG0605|consen 287 LSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYG 366 (550)
T ss_pred ccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCC
Confidence 98210 0 0 0 1235789999999999999999
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchh
Q 002401 292 TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQ 371 (927)
Q Consensus 292 ~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~ 371 (927)
..+|+|||||||||||.|.+||.+++..+..++|+...- +..
T Consensus 367 ~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~-------------~l~------------------------- 408 (550)
T KOG0605|consen 367 KECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRE-------------TLK------------------------- 408 (550)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh-------------hcc-------------------------
Confidence 999999999999999999999999999999888875221 000
Q ss_pred hhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCC---HHHHH
Q 002401 372 ALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWS---PFQAS 448 (927)
Q Consensus 372 ~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpT---A~EaL 448 (927)
+| .+..++++++|||.+||. ||++|+- ++||.
T Consensus 409 ---------------------------------fP-----------~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 409 ---------------------------------FP-----------EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred ---------------------------------CC-----------CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 01 011234688999999999 9999995 99999
Q ss_pred hCCCcCCCCCCCCCCC
Q 002401 449 RHPFVTGEPFTCPYQP 464 (927)
Q Consensus 449 qHPwf~~~~~~~~~~~ 464 (927)
+||||++..|..-++-
T Consensus 444 ~HPfF~~v~W~~l~~~ 459 (550)
T KOG0605|consen 444 KHPFFKGVDWDHLREM 459 (550)
T ss_pred cCCccccCCcchhhcC
Confidence 9999999888655444
No 20
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=396.87 Aligned_cols=258 Identities=28% Similarity=0.436 Sum_probs=221.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
..+|.+.+.||.|+|++||+|+++.++..||||.+.+. ....+....||+||++| .|+|||+|++++...
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-------~H~nIV~l~d~~~~~ 81 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-------KHPNIVRLLDCIEDD 81 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-------CCcceeeEEEEEecC
Confidence 37899999999999999999999999999999999754 45566778999999999 489999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCC---CeEEEeec
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP---AEIKIIDF 260 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~---g~IKL~DF 260 (927)
+.+|||||||. |+|.++++... .+++..++.++.||+.||++||+++||||||||+||||+..... ..+||+||
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 99999999998 79999998764 69999999999999999999999999999999999999865233 68999999
Q ss_pred CCcccccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 261 GSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 261 GlA~~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
|+|+.... ...+.||++.|||||++..+.|+.|+|+||+|+|||+|++|++||...+..+++..+.+.-...|
T Consensus 160 GfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~----- 234 (429)
T KOG0595|consen 160 GFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVP----- 234 (429)
T ss_pred chhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccC-----
Confidence 99987553 34567999999999999999999999999999999999999999998888887765443111000
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
.+
T Consensus 235 ----------------------------------------------------------~~-------------------- 236 (429)
T KOG0595|consen 235 ----------------------------------------------------------VL-------------------- 236 (429)
T ss_pred ----------------------------------------------------------ch--------------------
Confidence 00
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
+...+..+.+|+..+|..||..|.+..+-+.|+++...+
T Consensus 237 ~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 237 PAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred hhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 011223456899999999999999999999999998764
No 21
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.6e-44 Score=387.47 Aligned_cols=278 Identities=32% Similarity=0.539 Sum_probs=222.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|+++++||.|+||.||+|++..+++.||||+++... .....+.+|+++++.+ +|+||+++++++..++.
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~ 77 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-------KHANIVTLHDIIHTERC 77 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC-------CCCCEeeEEEEEcCCCe
Confidence 68999999999999999999999999999999997432 2334677899999988 58999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+++||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 78 ~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 78 LTLVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKLADFGLARAK 153 (288)
T ss_pred EEEEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEECcCcceeec
Confidence 99999999999998886543 3589999999999999999999999999999999999994 6688999999998643
Q ss_pred cc---cceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 267 DR---TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 267 ~~---~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.. ......++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.+.++ .|+...++...
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 232 (288)
T cd07871 154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLG-TPTEETWPGIT 232 (288)
T ss_pred cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCChHHhhccc
Confidence 22 2234467899999999876 4689999999999999999999999999999999999999888 55555444222
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
....+....- + .+....+.. .....
T Consensus 233 ~~~~~~~~~~---------------------------------~-----~~~~~~~~~-----------------~~~~~ 257 (288)
T cd07871 233 SNEEFRSYLF---------------------------------P-----QYRAQPLIN-----------------HAPRL 257 (288)
T ss_pred cchhhhcccc---------------------------------C-----ccCCCchHH-----------------hCCCC
Confidence 1111110000 0 000000000 11123
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+.+++|||++||++||.+|+|++|||+||||
T Consensus 258 ~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 258 DTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 4578999999999999999999999999998
No 22
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-44 Score=412.24 Aligned_cols=253 Identities=28% Similarity=0.437 Sum_probs=220.7
Q ss_pred cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
...-|++.+.||.|+.|.|-+|++..||+.+|||++.+. ......+.+||-||+.| .||||+++|++++
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-------~HpnVl~LydVwe 82 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-------EHPNVLRLYDVWE 82 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-------cCCCeeeeeeeec
Confidence 347899999999999999999999999999999999764 23345677899999999 5899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
.+.++|||.||++ |.|++++... +++++.++.++++||+.|+.|||..+||||||||+|+||+ ..+.|||+|||
T Consensus 83 ~~~~lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd---~~~nIKIADFG 157 (786)
T KOG0588|consen 83 NKQHLYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD---VKNNIKIADFG 157 (786)
T ss_pred cCceEEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh---cccCEeeeccc
Confidence 9999999999997 6899998776 4799999999999999999999999999999999999994 55669999999
Q ss_pred Cccc--ccccceeeccCCCCCCcchhcCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 262 SACT--EDRTVYSYIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 262 lA~~--~~~~~~~~~gT~~Y~APEvl~~~~ys-~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
+|.. .+.-..+.||++.|.|||++.+.+|+ .++||||+|||||.||||+.||.+++...++.++.+..-
T Consensus 158 MAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f-------- 229 (786)
T KOG0588|consen 158 MASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF-------- 229 (786)
T ss_pred eeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc--------
Confidence 9964 45556788999999999999999997 799999999999999999999998777666666554211
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
. ++
T Consensus 230 ------------------------~-------------------------------------------MP---------- 232 (786)
T KOG0588|consen 230 ------------------------E-------------------------------------------MP---------- 232 (786)
T ss_pred ------------------------c-------------------------------------------CC----------
Confidence 0 00
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
..++.++.|||++||++||++|+|.+||++|||+.+..
T Consensus 233 -s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 233 -SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred -CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 12446889999999999999999999999999999854
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-44 Score=401.95 Aligned_cols=252 Identities=28% Similarity=0.439 Sum_probs=216.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----h--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----P--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
.++|++.+.||+|+||+|++|++..+++.||||++.++ . ...+.+.+|+.+++.+++ ||||+++++++
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~------HpnI~~l~ev~ 89 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRS------HPNIIRLLEVF 89 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhcc------CCCEeEEEEEE
Confidence 37999999999999999999999999999999988753 1 234566689999999953 89999999999
Q ss_pred eecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCC-CeEEEee
Q 002401 182 VCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP-AEIKIID 259 (927)
Q Consensus 182 ~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~-g~IKL~D 259 (927)
....++|||||||.| +|++.+.. .+++.|.+++.+++||+.||+|||++||+||||||||||++ .. +.+||+|
T Consensus 90 ~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld---~~~~~~Kl~D 164 (370)
T KOG0583|consen 90 ATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD---GNEGNLKLSD 164 (370)
T ss_pred ecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec---CCCCCEEEec
Confidence 999999999999984 99999988 35799999999999999999999999999999999999995 44 8999999
Q ss_pred cCCcccc---cccceeeccCCCCCCcchhcCCC-CC-chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCC
Q 002401 260 FGSACTE---DRTVYSYIQSRYYRSPEVLLGYQ-YT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334 (927)
Q Consensus 260 FGlA~~~---~~~~~~~~gT~~Y~APEvl~~~~-ys-~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP 334 (927)
||++... +....+.+||+.|+|||++.+.. |+ .++||||+|||||.|++|+.||...+...+..+|.+..-
T Consensus 165 FG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~---- 240 (370)
T KOG0583|consen 165 FGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF---- 240 (370)
T ss_pred cccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc----
Confidence 9999865 45667889999999999999987 87 789999999999999999999988666555555332100
Q ss_pred hHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChh
Q 002401 335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME 414 (927)
Q Consensus 335 ~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e 414 (927)
. +| .
T Consensus 241 ----------------------------~-----------------------------------------~p--~----- 244 (370)
T KOG0583|consen 241 ----------------------------K-----------------------------------------IP--S----- 244 (370)
T ss_pred ----------------------------c-----------------------------------------CC--C-----
Confidence 0 00 0
Q ss_pred hhhhhhhh-HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 415 DISKESQI-RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 415 ~i~~e~~~-s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.+ +.++++||++||..||.+|+|+.|+++||||+..
T Consensus 245 ------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 245 ------YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQKE 281 (370)
T ss_pred ------CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhccC
Confidence 11 4578999999999999999999999999999973
No 24
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=380.18 Aligned_cols=266 Identities=25% Similarity=0.451 Sum_probs=231.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++++.||.|+||+|.+++.+.++..+|+|++++.+ ...+...+|..||+.+ .||.++++++.|.+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-------~~PFlv~l~~t~~d~ 116 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-------SHPFLVKLYGTFKDN 116 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-------cCceeEEEEEeeccC
Confidence 68999999999999999999999999999999998754 3345677899999998 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+|+||||++ |.|+.++++.. ++++..++.++.||+.||+|||+++|++|||||||||+ +.+|.|||+|||+|
T Consensus 117 ~~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFA 191 (355)
T KOG0616|consen 117 SNLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFA 191 (355)
T ss_pred CeEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccce
Confidence 99999999998 58888888764 79999999999999999999999999999999999999 58899999999999
Q ss_pred ccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 264 CTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 264 ~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
+.......+.|||+.|+|||++...+|+.++|.|||||++|||+.|.+||...+...+.++|++.--.
T Consensus 192 K~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~------------ 259 (355)
T KOG0616|consen 192 KRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVK------------ 259 (355)
T ss_pred EEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCccc------------
Confidence 99988899999999999999999999999999999999999999999999999988888887752110
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
+| ...+
T Consensus 260 -------------------------------------------------------------fP-------------~~fs 265 (355)
T KOG0616|consen 260 -------------------------------------------------------------FP-------------SYFS 265 (355)
T ss_pred -------------------------------------------------------------CC-------------cccC
Confidence 00 1234
Q ss_pred HHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCCCCCCCCCCCCCCCC
Q 002401 424 LALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPFTCPYQPPPETPRVP 472 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~~~~~~~~p~~p~~p 472 (927)
.+++|||+++|+.|-.+|. -.++|.+||||++..|..-.+..-++|..|
T Consensus 266 ~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 266 SDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred HHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCC
Confidence 5789999999999999994 567999999999877654433333333333
No 25
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.8e-43 Score=380.10 Aligned_cols=279 Identities=31% Similarity=0.542 Sum_probs=220.1
Q ss_pred CceEEEEEeccCCceeEEEeeccC-CCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee-
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-MNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC- 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~- 183 (927)
++|++++.||+|+||+||+|++.. +++.||||+++... .......+|+.+++.+... .||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~----~hpniv~~~~~~~~~ 76 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF----EHPNVVRLFDVCTVS 76 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc----CCCCcceEEEEEecc
Confidence 479999999999999999999854 57889999987432 2334566788888887543 69999999999863
Q ss_pred ----cceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 184 ----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 184 ----~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
...+++||||+.++|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~D 153 (290)
T cd07862 77 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLAD 153 (290)
T ss_pred cCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEcc
Confidence 3569999999999999998876556699999999999999999999999999999999999994 668999999
Q ss_pred cCCcccccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 260 FGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 260 FGlA~~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
||++..... ......++..|+|||++.+..++.++|||||||++|||++|++||.+.++.+.+..|.+..+...+..+
T Consensus 154 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 154 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred ccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 999965432 233456899999999999889999999999999999999999999999999999999988874333322
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
..........+.. .....++++..
T Consensus 234 ~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~-------------- 257 (290)
T cd07862 234 PRDVALPRQAFHS------------------------------------------KSAQPIEKFVT-------------- 257 (290)
T ss_pred hhhhcccchhccC------------------------------------------CCCCCHHHHcc--------------
Confidence 1111000000000 00011222211
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
.++..+.+||.+||++||++|||+.|+|+||||
T Consensus 258 ---~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 258 ---DIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ---CCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 234578899999999999999999999999998
No 26
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.2e-43 Score=378.23 Aligned_cols=280 Identities=33% Similarity=0.575 Sum_probs=221.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.+.||+|+||.||+|+++.+++.||||+++.. ....+.+.+|+++++.+ .|+||++++++|...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~ 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-------KQENIVELKEAFRRRG 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC-------CCccccchhhhEecCC
Confidence 4799999999999999999999999999999999753 23345677899999988 5899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+||||||+.+++++.+.... ..+++..++.++.||+.||+|||+.+|+||||||+|||++ .++.+||+|||++..
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 74 KLYLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFARN 149 (287)
T ss_pred EEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCccc
Confidence 999999999988777665443 4699999999999999999999999999999999999994 668899999999975
Q ss_pred ccc----cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 266 EDR----TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 266 ~~~----~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... ......++..|+|||++.+..++.++|||||||++|||++|++||.+.+..+.+..+.+..+..+.+.+....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 150 LSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred ccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 432 2223568999999999999899999999999999999999999999988888888888888854443322110
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
. ...+ .... .+. ......+. ......
T Consensus 230 ~-~~~~-~~~~--------------------------------~~~----~~~~~~~~----------------~~~~~~ 255 (287)
T cd07848 230 S-NPRF-HGLR--------------------------------FPA----VNHPQSLE----------------RRYLGI 255 (287)
T ss_pred c-cchh-cccc--------------------------------cCc----ccCcccHH----------------Hhhhcc
Confidence 0 0000 0000 000 00000000 001123
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
++.+++|||++||++||++|+|++|+|+||||
T Consensus 256 ~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 256 LSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 45689999999999999999999999999998
No 27
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.8e-43 Score=382.44 Aligned_cols=285 Identities=30% Similarity=0.499 Sum_probs=220.1
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.++|++.++||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.+ .|+||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~ 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-------KHANIVLLHDIIHTKE 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC-------CCCCcCeEEEEEecCC
Confidence 378999999999999999999999999999999997532 2234567899999988 5899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+|+||||+.++|.+++.... ..++++.++.++.||+.||+|||+++||||||||+|||++ .++.+||+|||++..
T Consensus 77 ~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~ 152 (303)
T cd07869 77 TLTLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGELKLADFGLARA 152 (303)
T ss_pred eEEEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECCCCccee
Confidence 999999999999998887653 4689999999999999999999999999999999999994 678899999999864
Q ss_pred ccc---cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCChHHHHH
Q 002401 266 EDR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGAS-EFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 266 ~~~---~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s-~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
... .....++++.|+|||++.+. .++.++|||||||++|||++|..||.+.. ..+.+..+...++ .+....+..
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 231 (303)
T cd07869 153 KSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLG-TPNEDTWPG 231 (303)
T ss_pred ccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhC-CCChhhccc
Confidence 322 22345678999999998764 68999999999999999999999998754 4566677777666 443332221
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
......+ + . ..+ ..+....+...... .
T Consensus 232 ~~~~~~~-~---------~--------~~~--------------------~~~~~~~~~~~~~~---------------~ 258 (303)
T cd07869 232 VHSLPHF-K---------P--------ERF--------------------TLYSPKNLRQAWNK---------------L 258 (303)
T ss_pred hhhcccc-c---------c--------ccc--------------------cccCCccHHHHhhc---------------c
Confidence 1110000 0 0 000 00011111111111 1
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.....+.|||++||++||++|+|++|||+||||++.+
T Consensus 259 ~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 259 SYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred CCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 1235788999999999999999999999999998753
No 28
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4e-44 Score=379.63 Aligned_cols=295 Identities=29% Similarity=0.524 Sum_probs=237.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe----EEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS----FVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~----~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
..|++++.||+|+||.||+|..++++. .+|||+++.+. .....+.+|+.++++| .|+||+.|..+|
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-------~h~nvi~Lv~Vf 96 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-------KHPNVISLVKVF 96 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-------cCCcchhHHHHH
Confidence 589999999999999999996655533 78999998652 3446788999999999 489999999999
Q ss_pred ee-cceeEEEEecccchhHHHHHhhc---cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec-CCCCeEE
Q 002401 182 VC-QRHLCICFELLDSNLYELIKINH---FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS-VKPAEIK 256 (927)
Q Consensus 182 ~~-~~~l~LVmEy~~GsL~dlL~~~~---~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~-~~~g~IK 256 (927)
.. +..+++|+||.+.+|+++|+... .+.++...++.|+.||+.|+.|||++.|+||||||.||||..+ .+.|+||
T Consensus 97 l~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 97 LSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred hccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence 87 78999999999999999997654 3459999999999999999999999999999999999999633 3459999
Q ss_pred EeecCCcccccccc------eeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC---------HHH
Q 002401 257 IIDFGSACTEDRTV------YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGAS---------EFD 320 (927)
Q Consensus 257 L~DFGlA~~~~~~~------~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s---------~~d 320 (927)
|+|||+++...... ...+-|.+|+|||++++. .|+.++|||++|||+.||+|-.+.|.+.. ..+
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 99999998654432 345679999999999997 69999999999999999999999998753 367
Q ss_pred HHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHH
Q 002401 321 LLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEE 400 (927)
Q Consensus 321 ~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~ 400 (927)
++.+|.+++| .|.+..|+..++...+-..+... ...++....|..
T Consensus 257 Ql~rIf~vLG-~Pt~~~Wp~lkk~Pe~q~~ls~f----------------------------------~~~~~~n~sL~~ 301 (438)
T KOG0666|consen 257 QLDRIFEVLG-TPTDKDWPDLKKMPEYQTLLSDF----------------------------------RRHYYDNVSLHK 301 (438)
T ss_pred HHHHHHHHcC-CCccccchhhhhCcchHHHHHHh----------------------------------HHhhcCcchHHH
Confidence 8999999999 88888888766655442222100 011233333444
Q ss_pred HHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 401 IVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 401 il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
...... .-++.+.|||.+||.+||.+|+||+|||+|+||++.+++
T Consensus 302 ~~~~~k--------------~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 302 YYHKHK--------------VKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHHhc--------------CCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 433211 112357899999999999999999999999999988653
No 29
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-45 Score=375.74 Aligned_cols=257 Identities=28% Similarity=0.441 Sum_probs=222.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+.|.+.+.||+|.|+.|++|.+..+|+.+|+|++... ....++..+|++|.+.| .|||||+|.+.+....
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-------qHP~IvrL~~ti~~~~ 83 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-------QHPNIVRLHDSIQEES 83 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-------CCCcEeehhhhhcccc
Confidence 7899999999999999999999999999999998642 34677888999999999 5899999999999999
Q ss_pred eeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
..|||||+|.| +|..-|-... -++|..+-.+++|||+||.|+|.++|||||+||+|+|+.......-+||+|||+|.
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred eeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEE
Confidence 99999999985 6665554443 38899999999999999999999999999999999999888888899999999997
Q ss_pred cccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 265 TEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 265 ~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
..+. .....+||+.|||||++...+|+..+|||+.|||||-|+.|++||.+++..++.+.|++.--..++
T Consensus 162 ~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~-------- 233 (355)
T KOG0033|consen 162 EVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPS-------- 233 (355)
T ss_pred EeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCC--------
Confidence 6653 234568999999999999999999999999999999999999999999988888888763220000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
| .+..+
T Consensus 234 ---------------------------------------------------------------~-----------~w~~i 239 (355)
T KOG0033|consen 234 ---------------------------------------------------------------P-----------EWDTV 239 (355)
T ss_pred ---------------------------------------------------------------c-----------ccCcC
Confidence 0 11234
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
++++++||++||..||.||+|+.|||+|||+.+.
T Consensus 240 s~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 240 TPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred CHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 5688999999999999999999999999999875
No 30
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.4e-42 Score=380.94 Aligned_cols=279 Identities=32% Similarity=0.557 Sum_probs=220.1
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
+|++.++||+|+||.||+|++..+++.||||+++.. ......+.+|+++|+.+ .||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~~ 73 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-------RHPDIVEIKHIMLPPSR 73 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-------CCCCEeeecceEeccCC
Confidence 699999999999999999999999999999998742 23345678899999988 489999999988643
Q ss_pred ---ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 185 ---RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 185 ---~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
..+|||||||+++|.+++.... .+++..++.++.||++||+|||+++|+||||||+|||+ +.++.+||+|||
T Consensus 74 ~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg 148 (338)
T cd07859 74 REFKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFG 148 (338)
T ss_pred CCCceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCc
Confidence 3589999999999999887653 59999999999999999999999999999999999999 467899999999
Q ss_pred Cccccccc------ceeeccCCCCCCcchhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 262 SACTEDRT------VYSYIQSRYYRSPEVLLG--YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 262 lA~~~~~~------~~~~~gT~~Y~APEvl~~--~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
++...... ....+++..|+|||++.+ ..++.++|||||||++|||++|++||.+.+....+..+...++ .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~-~~ 227 (338)
T cd07859 149 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLG-TP 227 (338)
T ss_pred cccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhC-CC
Confidence 99643211 123578999999999876 5789999999999999999999999999988888888888888 44
Q ss_pred ChHHHHHhhhc--chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCC
Q 002401 334 PDYVLKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL 411 (927)
Q Consensus 334 P~~~l~~~~~~--~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~l 411 (927)
+.......... ..++.... ... ...+.+.+
T Consensus 228 ~~~~~~~i~~~~~~~~~~~~~-------------------------------~~~--------~~~~~~~~--------- 259 (338)
T cd07859 228 SPETISRVRNEKARRYLSSMR-------------------------------KKQ--------PVPFSQKF--------- 259 (338)
T ss_pred CHHHHHHhhhhhHHHHHHhhc-------------------------------ccC--------CCchHHhc---------
Confidence 44433322110 00000000 000 00001100
Q ss_pred ChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 412 SMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 412 s~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
...+..+.+||.+||+.||++|||++|+|+||||++..
T Consensus 260 --------~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 260 --------PNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred --------CCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 12345788999999999999999999999999998754
No 31
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.7e-42 Score=371.60 Aligned_cols=278 Identities=33% Similarity=0.560 Sum_probs=219.0
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
+|++++.||+|+||+||+|+++.+++.||||+++.. ........+|+.+++.+... +|+||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~----~h~ni~~~~~~~~~~~~ 76 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF----DHPNIVRLMDVCATSRT 76 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc----CCCCeeeeeeeeccccC
Confidence 589999999999999999999999999999999743 22234566788988888543 699999999998652
Q ss_pred ---ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 185 ---RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 185 ---~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
..+++|||++.++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||
T Consensus 77 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg 153 (288)
T cd07863 77 DRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFG 153 (288)
T ss_pred CCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccC
Confidence 468999999999999988776555699999999999999999999999999999999999994 66889999999
Q ss_pred Cccccccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHH
Q 002401 262 SACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 262 lA~~~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
++...... .....++..|+|||++.+..++.++|||||||++|+|++|++||.+....+.+.++....+ .+....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~ 232 (288)
T cd07863 154 LARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG-LPPEDDWP 232 (288)
T ss_pred ccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhC-CCChhhCc
Confidence 99754322 2345678899999999988999999999999999999999999999888888888888877 33222111
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
..... + . ..+. + .....+.++.
T Consensus 233 ~~~~~----------~---~--------~~~~--------------~------~~~~~~~~~~----------------- 254 (288)
T cd07863 233 RDVTL----------P---R--------GAFS--------------P------RGPRPVQSVV----------------- 254 (288)
T ss_pred ccccc----------c---c--------cccC--------------C------CCCCchHHhC-----------------
Confidence 00000 0 0 0000 0 0000111111
Q ss_pred hhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
..++..+.|||.+||++||++|||+.|+|+||||
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 255 PEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1234578999999999999999999999999998
No 32
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.5e-43 Score=379.59 Aligned_cols=252 Identities=25% Similarity=0.397 Sum_probs=213.9
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||.||+|++..+++.||||+++... ...+.+.+|+++|+.+ .||||+++++++.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~ 73 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-------SHPFIIRLFWTEHDQ 73 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-------CCCcHhhhHhhhccC
Confidence 37999999999999999999999999999999997532 2345577899999988 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+|+||||+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~ 148 (291)
T cd05612 74 RFLYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLTDFGFA 148 (291)
T ss_pred CeEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEEecCcc
Confidence 99999999997 5888888764 3689999999999999999999999999999999999994 6689999999999
Q ss_pred ccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 264 CTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 264 ~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
..........++++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+....- .
T Consensus 149 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~----------- 216 (291)
T cd05612 149 KKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL-E----------- 216 (291)
T ss_pred hhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc-C-----------
Confidence 7665555566899999999999998999999999999999999999999988776655544432100 0
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
+| ...+
T Consensus 217 -------------------------------------------------------------~~-------------~~~~ 222 (291)
T cd05612 217 -------------------------------------------------------------FP-------------RHLD 222 (291)
T ss_pred -------------------------------------------------------------CC-------------ccCC
Confidence 00 0123
Q ss_pred HHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCC
Q 002401 424 LALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF 458 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~ 458 (927)
..+++||++||+.||.+|++ ++|+++||||+...+
T Consensus 223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 262 (291)
T cd05612 223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDW 262 (291)
T ss_pred HHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence 46889999999999999995 999999999987654
No 33
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=404.19 Aligned_cols=259 Identities=25% Similarity=0.442 Sum_probs=225.4
Q ss_pred ccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 106 ~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
...++|+++++||+|.||+|+++..+.+++++|||++|++ +...+..+.|.+|+...+ .||.+++++.+|
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~------~HPFL~~L~~~f 438 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN------RHPFLVNLFSCF 438 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc------cCCeEeeccccc
Confidence 3458999999999999999999999999999999999975 456778889999998885 499999999999
Q ss_pred eecceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 182 VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 182 ~~~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
+.++++|+||||+.|+. ++.......|++..++.|+..|+.||+|||++|||+||||.+|||| +..|.+||+|||
T Consensus 439 QT~~~l~fvmey~~Ggd--m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFG 513 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGD--LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFG 513 (694)
T ss_pred ccCCeEEEEEEecCCCc--EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccc
Confidence 99999999999998654 3333334579999999999999999999999999999999999999 588999999999
Q ss_pred Cccc---ccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 262 SACT---EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 262 lA~~---~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
+++. .+....+.|||+.|+|||++.+..|+.++|.|+|||+|||||.|..||+++++.++...|+..--
T Consensus 514 lcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~-------- 585 (694)
T KOG0694|consen 514 LCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV-------- 585 (694)
T ss_pred cccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC--------
Confidence 9974 34566788999999999999999999999999999999999999999999999998887764100
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
.||
T Consensus 586 -----------------------------------------------------------------~yP------------ 588 (694)
T KOG0694|consen 586 -----------------------------------------------------------------RYP------------ 588 (694)
T ss_pred -----------------------------------------------------------------CCC------------
Confidence 011
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCCCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPFTCP 461 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~~~~ 461 (927)
..++.+++++|++||..||++|+- +++|.+||||+...|..-
T Consensus 589 -~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L 635 (694)
T KOG0694|consen 589 -RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDL 635 (694)
T ss_pred -CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHH
Confidence 123457889999999999999996 589999999999876443
No 34
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.5e-42 Score=383.34 Aligned_cols=290 Identities=30% Similarity=0.537 Sum_probs=224.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ......+.+|+.+++.+ .|+||++++++|...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~ 92 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-------NHKNIISLLNVFTPQ 92 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-------CCCCEeeeeeeeccC
Confidence 37999999999999999999999999999999999743 33455677899999888 589999999998754
Q ss_pred c------eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 185 R------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 185 ~------~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
+ .+|+||||++++|.+.+.. .+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+
T Consensus 93 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~---~~~~~kl~ 165 (359)
T cd07876 93 KSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKIL 165 (359)
T ss_pred CCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEe
Confidence 3 5799999999988887643 488999999999999999999999999999999999994 67899999
Q ss_pred ecCCcccccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 259 DFGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 259 DFGlA~~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
|||++..... ......+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.+.++ .|+..
T Consensus 166 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~ 244 (359)
T cd07876 166 DFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG-TPSAE 244 (359)
T ss_pred cCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCcHH
Confidence 9999965332 22345789999999999999999999999999999999999999999988888889988888 55544
Q ss_pred HHHHhhhc-chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 337 VLKEAKNT-SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 337 ~l~~~~~~-~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
+....... ..+..... .+....+.+++....+.. .
T Consensus 245 ~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~-----~ 280 (359)
T cd07876 245 FMNRLQPTVRNYVENRP---------------------------------------QYPGISFEELFPDWIFPS-----E 280 (359)
T ss_pred HHHHHHHHHHHHHhhCC---------------------------------------CCCCcchhhhcccccccc-----c
Confidence 43322111 11111110 000111111111111000 0
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.......+..+++||.+||.+||++|||+.|||+||||+..
T Consensus 281 ~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 281 SERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred cccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence 00111234578999999999999999999999999999864
No 35
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.6e-42 Score=397.00 Aligned_cols=281 Identities=33% Similarity=0.601 Sum_probs=220.1
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec---
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ--- 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~--- 184 (927)
.++|++.++||+|+||.||+|++..+++.||||++..... ...+|+.+|+.+ .|+||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l-------~h~niv~l~~~~~~~~~~ 134 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNL-------NHINIIFLKDYYYTECFK 134 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhc-------CCCCCcceeeeEeecccc
Confidence 4689999999999999999999999999999999875432 234799999988 589999999987542
Q ss_pred -----ceeEEEEecccchhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEE
Q 002401 185 -----RHLCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257 (927)
Q Consensus 185 -----~~l~LVmEy~~GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL 257 (927)
..+++||||++++|.+++... ....+++..++.++.||+.||+|||+++||||||||+|||++ .....+||
T Consensus 135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~--~~~~~vkL 212 (440)
T PTZ00036 135 KNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID--PNTHTLKL 212 (440)
T ss_pred cCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc--CCCCceee
Confidence 257899999999988877643 234699999999999999999999999999999999999995 23457999
Q ss_pred eecCCccccc--ccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCC
Q 002401 258 IDFGSACTED--RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334 (927)
Q Consensus 258 ~DFGlA~~~~--~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP 334 (927)
+|||+|+... ......++++.|+|||++.+. .|+.++||||||||||||++|.+||.+.+..+.+.++++.++ .|+
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~-~p~ 291 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG-TPT 291 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCC
Confidence 9999997542 233456789999999998765 699999999999999999999999999999999999999988 554
Q ss_pred hHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChh
Q 002401 335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME 414 (927)
Q Consensus 335 ~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e 414 (927)
...+..... .|.... .+ ......+... +|
T Consensus 292 ~~~~~~~~~---~~~~~~--------------------------------~~-----~~~~~~l~~~---~p-------- 320 (440)
T PTZ00036 292 EDQLKEMNP---NYADIK--------------------------------FP-----DVKPKDLKKV---FP-------- 320 (440)
T ss_pred HHHHHHhch---hhhccc--------------------------------CC-----ccCchhHHHH---hc--------
Confidence 433321110 000000 00 0000111111 11
Q ss_pred hhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 415 DISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 415 ~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
...+.++++||.+||++||++|+|+.|+|+||||....
T Consensus 321 -----~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 321 -----KGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred -----cCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 12345789999999999999999999999999998753
No 36
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=401.71 Aligned_cols=263 Identities=23% Similarity=0.424 Sum_probs=223.9
Q ss_pred eeceeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCcee
Q 002401 97 AVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIV 175 (927)
Q Consensus 97 ~~~~~l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIV 175 (927)
.+..+....+-..+|...++||+|+.|.||.|+...+++.||||.+.... ...+.+++|+.+|+.+ .|+|||
T Consensus 261 ~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-------~H~NiV 333 (550)
T KOG0578|consen 261 KLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL-------HHPNIV 333 (550)
T ss_pred HhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc-------cchHHH
Confidence 34444444555689999999999999999999999999999999997543 3456688999999999 489999
Q ss_pred EEEEEEeecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCe
Q 002401 176 RIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAE 254 (927)
Q Consensus 176 rl~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~ 254 (927)
++++.|...+.+++|||||+ |+|.|++.... ++|.++..|++++|.||+|||.+||+|||||.+|||++ .++.
T Consensus 334 nfl~Sylv~deLWVVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~ 407 (550)
T KOG0578|consen 334 NFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGS 407 (550)
T ss_pred HHHHHhcccceeEEEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCc
Confidence 99999999999999999998 57888887764 99999999999999999999999999999999999995 6688
Q ss_pred EEEeecCCcccccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q 002401 255 IKIIDFGSACTEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA 331 (927)
Q Consensus 255 IKL~DFGlA~~~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~ 331 (927)
+||+|||+|..... ...+.+||++|||||++....|++|+||||||++++||+-|.+||-.++....+..|... |
T Consensus 408 vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g- 485 (550)
T KOG0578|consen 408 VKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-G- 485 (550)
T ss_pred EEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-C-
Confidence 99999999976543 345679999999999999999999999999999999999999999877766665555431 1
Q ss_pred CCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCC
Q 002401 332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL 411 (927)
Q Consensus 332 ~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~l 411 (927)
.|.
T Consensus 486 ~P~----------------------------------------------------------------------------- 488 (550)
T KOG0578|consen 486 TPK----------------------------------------------------------------------------- 488 (550)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 110
Q ss_pred ChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 412 SMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 412 s~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
+.....++.+|+|||.+||+.|+++|++|.|+|+||||+.
T Consensus 489 ----lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 489 ----LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred ----cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 0111245678999999999999999999999999999954
No 37
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.3e-43 Score=397.41 Aligned_cols=250 Identities=31% Similarity=0.510 Sum_probs=219.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|.+.+.||+|+||.|||++.+.+.+.||||.+.+. +...+...+|++|++.|+ |||||.++++|+...
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk-------Hpniv~m~esfEt~~ 74 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK-------HPNIVEMLESFETSA 74 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC-------CcchhhHHHhhcccc
Confidence 5788999999999999999999999999999999753 345567889999999994 899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
++|+|.|||.|+|..++.... .++|+.++.|+.|++.||.|||+++|+|||+||.|||+ ...+.+||||||+|+.
T Consensus 75 ~~~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~ 149 (808)
T KOG0597|consen 75 HLWVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARA 149 (808)
T ss_pred eEEEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhh
Confidence 999999999999999998764 69999999999999999999999999999999999999 5889999999999986
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....||+.|||||++.+.+|+..+|+||||||+|||++|++||...+..++++.|.. .|+.+
T Consensus 150 m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~----d~v~~------ 219 (808)
T KOG0597|consen 150 MSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK----DPVKP------ 219 (808)
T ss_pred cccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc----CCCCC------
Confidence 5543 2345799999999999999999999999999999999999999987666555555543 11110
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
...+
T Consensus 220 ----------------------------------------------------------------------------p~~~ 223 (808)
T KOG0597|consen 220 ----------------------------------------------------------------------------PSTA 223 (808)
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0134
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+..|+.||+.+|..||.+|+|-.++|.|||+++.
T Consensus 224 S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 224 SSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred cHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 4689999999999999999999999999999875
No 38
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.6e-42 Score=373.24 Aligned_cols=282 Identities=31% Similarity=0.525 Sum_probs=223.9
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.++||+|+||.||+|++..+++.||||+++... .....+.+|+++++.+ .|+||+++++++..++.
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~ 78 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-------KHANIVTLHDIVHTDKS 78 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-------CCCCcceEEEEEeeCCe
Confidence 68999999999999999999999999999999997432 2234567899999988 58999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|||++...
T Consensus 79 ~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 79 LTLVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARAK 154 (309)
T ss_pred EEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccceec
Confidence 99999999999988876553 4589999999999999999999999999999999999994 6688999999998643
Q ss_pred cc---cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 267 DR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 267 ~~---~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.. ......++..|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+.+.++ .++...++...
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (309)
T cd07872 155 SVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLG-TPTEETWPGIS 233 (309)
T ss_pred CCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHHhhhc
Confidence 22 22234678899999998764 689999999999999999999999999998899999999888 55544443221
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
....+.+ .. .+ .+....+ . .....+
T Consensus 234 ~~~~~~~-~~--------------------------------~~-----~~~~~~~---~--------------~~~~~~ 258 (309)
T cd07872 234 SNDEFKN-YN--------------------------------FP-----KYKPQPL---I--------------NHAPRL 258 (309)
T ss_pred chhhhhh-hh--------------------------------cC-----ccCCCch---h--------------hhccCC
Confidence 1111000 00 00 0000000 0 011124
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
+.+++|||++||++||++|+|++|+|+||||+...
T Consensus 259 ~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 259 DTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred CHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 56789999999999999999999999999998753
No 39
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.6e-42 Score=390.52 Aligned_cols=282 Identities=20% Similarity=0.364 Sum_probs=216.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
..+|+++++||+|+||.||+|++..+++.||||+... ..+.+|+++|++| .||||++++++|......
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l-------~HpnIv~~~~~~~~~~~~ 158 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAI-------NHPSIIQLKGTFTYNKFT 158 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhC-------CCCCCCCEeEEEEECCee
Confidence 4689999999999999999999999999999997653 3467899999998 589999999999999999
Q ss_pred EEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|+|||++.++|.+++... ..+++..++.++.||+.||+|||+++||||||||+|||++ ..+.+||+|||+|+...
T Consensus 159 ~lv~e~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~ 233 (391)
T PHA03212 159 CLILPRYKTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPV 233 (391)
T ss_pred EEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCcccccc
Confidence 999999999999888664 3689999999999999999999999999999999999994 66889999999996432
Q ss_pred ----ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHHHHhCCCCChH
Q 002401 268 ----RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA-------SEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 268 ----~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~-------s~~d~l~~I~~~lG~~PP~~ 336 (927)
......+||+.|+|||++.+..++.++||||||||||||++|..||... .....+..+++.+|..|.++
T Consensus 234 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred cccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 2223457899999999999989999999999999999999999776432 23456777777777333222
Q ss_pred HHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 337 ~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
...........+... .......+ .....+.
T Consensus 314 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~------~~~~~~~----------------- 343 (391)
T PHA03212 314 PIDAQANLDEIYIGL---------------------------AKKSSRKP------GSRPLWT----------------- 343 (391)
T ss_pred CcchhHHHHHHHHHH---------------------------HhccCCCC------CCCCCHH-----------------
Confidence 111100000000000 00000000 0000000
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
....++.++.+||.+||.+||++||||+|+|+||||+..+
T Consensus 344 -~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 344 -NLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred -HHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 0112345789999999999999999999999999998753
No 40
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.2e-42 Score=383.29 Aligned_cols=253 Identities=24% Similarity=0.425 Sum_probs=214.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.++|++.+.||+|+||.||+|++..+++.||||+++... ...+.+.+|+++|+.+ .|+||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~ 89 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-------SHPFIVNMMCSFQD 89 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-------CCCCCCcEEEEEEc
Confidence 378999999999999999999999999999999998532 2345677899999988 58999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
++.+|+||||+. ++|.+.+... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||+
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~ 164 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGHVKVTDFGF 164 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCCEEEeeccC
Confidence 999999999997 5888888764 3689999999999999999999999999999999999994 678999999999
Q ss_pred cccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 263 ACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 263 A~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
+..........++++.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+.+..-
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~------------ 232 (329)
T PTZ00263 165 AKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL------------ 232 (329)
T ss_pred ceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc------------
Confidence 98766666667899999999999999999999999999999999999999987766554444322000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
.+| ..+
T Consensus 233 -------------------------------------------------------------~~p-------------~~~ 238 (329)
T PTZ00263 233 -------------------------------------------------------------KFP-------------NWF 238 (329)
T ss_pred -------------------------------------------------------------CCC-------------CCC
Confidence 000 012
Q ss_pred HHHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF 458 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~ 458 (927)
+..+.+||++||+.||++|++ ++|+|+||||.+..+
T Consensus 239 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~ 279 (329)
T PTZ00263 239 DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANW 279 (329)
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCH
Confidence 246789999999999999997 799999999987544
No 41
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-41 Score=380.77 Aligned_cols=290 Identities=30% Similarity=0.534 Sum_probs=223.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ......+.+|+.+++.+ .|+||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~ii~~~~~~~~~ 95 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIIGLLNVFTPQ 95 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-------CCCCccccceeeccc
Confidence 37999999999999999999999999999999999753 33445677899999888 589999999988654
Q ss_pred ------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 185 ------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 185 ------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
..+|+||||++++|.+.+.. .+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+
T Consensus 96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~ 168 (364)
T cd07875 96 KSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKIL 168 (364)
T ss_pred ccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC---CCCcEEEE
Confidence 35799999999998887753 388999999999999999999999999999999999994 66899999
Q ss_pred ecCCccccccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 259 DFGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 259 DFGlA~~~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
|||++...... .....++..|+|||++.+..++.++|||||||+||+|++|+.||.+.+..+.+.++++.++...++
T Consensus 169 DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 247 (364)
T cd07875 169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE- 247 (364)
T ss_pred eCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH-
Confidence 99999765432 234578999999999999999999999999999999999999999999999999999988844443
Q ss_pred HHHHhhh-cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 337 VLKEAKN-TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 337 ~l~~~~~-~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
+++.... ...+...... +....++.+....... .+
T Consensus 248 ~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~-----~~ 283 (364)
T cd07875 248 FMKKLQPTVRTYVENRPK---------------------------------------YAGYSFEKLFPDVLFP-----AD 283 (364)
T ss_pred HHHhhhHHHHHHHhhCCC---------------------------------------cCCCChHhhCcccccc-----cc
Confidence 3332211 1111111100 0000111111100000 00
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.......+..++|||.+||++||++|||++|+|+||||...
T Consensus 284 ~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 284 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred ccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 00111234578999999999999999999999999999753
No 42
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.3e-41 Score=380.05 Aligned_cols=291 Identities=29% Similarity=0.517 Sum_probs=223.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ......+.+|+.+++.+ .|+||++++++|...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~ 88 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIISLLNVFTPQ 88 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-------CCCchhceeeeeecc
Confidence 37999999999999999999999999999999999753 33445677899999888 589999999998654
Q ss_pred ------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 185 ------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 185 ------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
..+|+||||++++|.+.+.. .+++..++.++.||++||+|||++||+||||||+|||++ .++.+||+
T Consensus 89 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~---~~~~~kl~ 161 (355)
T cd07874 89 KSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKIL 161 (355)
T ss_pred ccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC---CCCCEEEe
Confidence 35799999999998887753 388999999999999999999999999999999999994 67889999
Q ss_pred ecCCccccccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 259 DFGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 259 DFGlA~~~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
|||++...... .....++..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+++.++...++.
T Consensus 162 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 162 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred eCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99999765432 2345789999999999998999999999999999999999999999998888888888888444443
Q ss_pred HHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 337 ~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
+.........+......... ..+...+....+ ..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~-----~~~~ 277 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAG---------------------------------------LTFPKLFPDSLF-----PADS 277 (355)
T ss_pred HHhhcHHHHHHHhcCCcccc---------------------------------------ccchhhcccccc-----cccc
Confidence 32211111112111110000 000000000000 0000
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
......+..+++||.+||.+||++|||+.|+|+||||...
T Consensus 278 ~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 278 EHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred ccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 0111234578999999999999999999999999999754
No 43
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-42 Score=387.00 Aligned_cols=258 Identities=31% Similarity=0.487 Sum_probs=223.6
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~----~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
...|++.+.||.|.||.||+|+++.+++.+|+|++++... ..+.+.+|++||++|. .|||||.++++|++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~------~hpniv~l~~~~e~ 107 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS------GHPNIVQLKDAFED 107 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc------CCCCEEEEEEEEEc
Confidence 4799999999999999999999999999999999986532 3467889999999995 29999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC-CCeEEEeecC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK-PAEIKIIDFG 261 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~-~g~IKL~DFG 261 (927)
...++||||+|. |.|++.+... .+++..+..+++||+.+++|||+.|||||||||+|||+..... .+.+|++|||
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999998 6899988776 3999999999999999999999999999999999999976544 4589999999
Q ss_pred Ccccccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHH
Q 002401 262 SACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 262 lA~~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
++..... .....+||+.|+|||++....|+..+||||+||++|.|++|.+||.+.+......+|...--
T Consensus 185 la~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--------- 255 (382)
T KOG0032|consen 185 LAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--------- 255 (382)
T ss_pred CceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC---------
Confidence 9976554 56778999999999999999999999999999999999999999999988777665543100
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
.....+ +
T Consensus 256 -----------------------------------------------~f~~~~--------------------------w 262 (382)
T KOG0032|consen 256 -----------------------------------------------DFTSEP--------------------------W 262 (382)
T ss_pred -----------------------------------------------CCCCCC--------------------------c
Confidence 000111 1
Q ss_pred hhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
..++..+.|||++||..||.+|+||.++|+|||+++.
T Consensus 263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 263 DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred cccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 2345689999999999999999999999999999975
No 44
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.6e-41 Score=382.39 Aligned_cols=283 Identities=30% Similarity=0.450 Sum_probs=222.3
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc-
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR- 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~- 185 (927)
+|+++++||+|+||.||+|++..+++.||||++... ....+.+.+|+++|+.+ .|+||+++++++...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~ 73 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-------KHDNVLSALDILQPPHI 73 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-------CCCCcCCHhheecCCCc
Confidence 477899999999999999999999999999998743 23445778899999988 4899999999998776
Q ss_pred ----eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 186 ----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 186 ----~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
++|+||||+.++|.+.+... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||
T Consensus 74 ~~~~~~~lv~e~~~~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg 148 (372)
T cd07853 74 DPFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNCVLKICDFG 148 (372)
T ss_pred cccceEEEEeeccccCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---CCCCEEecccc
Confidence 89999999999998887654 3699999999999999999999999999999999999994 67899999999
Q ss_pred Ccccccc----cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 262 SACTEDR----TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 262 lA~~~~~----~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
++..... ......+++.|+|||++.+. .++.++||||||||+|||++|+.||.+.+..+.+..|.+.+|..+.+.
T Consensus 149 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 149 LARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred ceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 9965332 12334678899999999875 589999999999999999999999999999999999999999443333
Q ss_pred HHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 337 ~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
+.........++... ... ...+..+. .
T Consensus 229 ~~~~~~~~~~~~~~~-------------------------------~~~---------~~~~~~~~---~---------- 255 (372)
T cd07853 229 MRSACEGARAHILRG-------------------------------PHK---------PPSLPVLY---T---------- 255 (372)
T ss_pred HHHhhHHHHHHHHhC-------------------------------CCC---------CCchHHhc---c----------
Confidence 222111111100000 000 00000000 0
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
.....++++++||.+||++||++|||++|+|+||||.+..+
T Consensus 256 -~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 296 (372)
T cd07853 256 -LSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRL 296 (372)
T ss_pred -cCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcc
Confidence 01123467899999999999999999999999999998653
No 45
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-42 Score=379.30 Aligned_cols=259 Identities=25% Similarity=0.396 Sum_probs=212.3
Q ss_pred eeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---------------hhHHHHHHHHHHHHHHhhhc
Q 002401 102 LVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------------AYYQQALVEVSILTTLNKKY 166 (927)
Q Consensus 102 l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---------------~~~~~~~~Ei~iL~~L~~~~ 166 (927)
.......++|++++.||+|.||.|.+|++..+++.||||++.+.+ ...++..+||.||++|
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl---- 165 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL---- 165 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc----
Confidence 334445689999999999999999999999999999999996432 1235788999999999
Q ss_pred CCCCCCceeEEEEEEeec--ceeEEEEecccchhHHHHHhhccCC-CCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCC
Q 002401 167 DREDKHHIVRIYEYFVCQ--RHLCICFELLDSNLYELIKINHFRG-LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPEN 243 (927)
Q Consensus 167 ~~~~HpnIVrl~~~f~~~--~~l~LVmEy~~GsL~dlL~~~~~~~-L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeN 243 (927)
+|+|||+|+++..+. +.+|||+|||...-.. .....+. +.+.++++|+++++.||+|||.+|||||||||.|
T Consensus 166 ---~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~--w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN 240 (576)
T KOG0585|consen 166 ---HHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVK--WCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN 240 (576)
T ss_pred ---CCcCeeEEEEeecCcccCceEEEEEeccCCccc--cCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 589999999998864 5899999999843221 1222234 8999999999999999999999999999999999
Q ss_pred EEEeecCCCCeEEEeecCCcccc--------cccceeeccCCCCCCcchhcCC---C-CCchhHHHHHHHHHHHHHhCCC
Q 002401 244 ILLCTSVKPAEIKIIDFGSACTE--------DRTVYSYIQSRYYRSPEVLLGY---Q-YTTAIDMWSFGCIVAELFLGLP 311 (927)
Q Consensus 244 ILL~~~~~~g~IKL~DFGlA~~~--------~~~~~~~~gT~~Y~APEvl~~~---~-ys~ksDIWSLG~ILyELlTG~~ 311 (927)
+||+ .+++|||+|||.+... +......+||+.|+|||++.+. . .+.+.||||+||+||+|+.|+.
T Consensus 241 LLl~---~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~ 317 (576)
T KOG0585|consen 241 LLLS---SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQL 317 (576)
T ss_pred eEEc---CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccC
Confidence 9994 6699999999998643 1223346899999999999873 2 3479999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcc
Q 002401 312 LFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391 (927)
Q Consensus 312 PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~ 391 (927)
||-++...++..+|+..-- .
T Consensus 318 PF~~~~~~~l~~KIvn~pL-~----------------------------------------------------------- 337 (576)
T KOG0585|consen 318 PFFDDFELELFDKIVNDPL-E----------------------------------------------------------- 337 (576)
T ss_pred CcccchHHHHHHHHhcCcc-c-----------------------------------------------------------
Confidence 9999998888888875211 0
Q ss_pred cccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 392 ~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+| ...++.+.++|||++||+.||++|+|+.+|..|||.+..
T Consensus 338 -------------fP-----------~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 338 -------------FP-----------ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred -------------CC-----------CcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 00 001234578999999999999999999999999999875
No 46
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.8e-42 Score=369.36 Aligned_cols=256 Identities=24% Similarity=0.368 Sum_probs=207.7
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
|++.++||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+ .|++|+++++++...+.
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-------~~~~iv~~~~~~~~~~~ 74 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-------NSRFVVSLAYAYETKDA 74 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-------CCCcEEEEEEEEccCCe
Confidence 788999999999999999999999999999987532 2223567899999988 58899999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+||||+. ++|.+.+.......+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++..
T Consensus 75 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~kl~Dfg~~~~ 151 (285)
T cd05631 75 LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISDLGLAVQ 151 (285)
T ss_pred EEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeCCCcEE
Confidence 999999998 5777777654444699999999999999999999999999999999999994 668899999999975
Q ss_pred ccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 266 EDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 266 ~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
... ......++..|+|||++.+..++.++|||||||+||||++|+.||...........+...+. ...
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~--------- 221 (285)
T cd05631 152 IPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-EDQ--------- 221 (285)
T ss_pred cCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-ccc---------
Confidence 432 22345789999999999999999999999999999999999999987554322222221110 000
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
..+ ...++
T Consensus 222 -----------------------------------------------------------~~~-------------~~~~s 229 (285)
T cd05631 222 -----------------------------------------------------------EEY-------------SEKFS 229 (285)
T ss_pred -----------------------------------------------------------ccC-------------CccCC
Confidence 000 01234
Q ss_pred HHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCC
Q 002401 424 LALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF 458 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~ 458 (927)
..+.+||++||..||++|+| ++|+++||||.+..+
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 57889999999999999997 899999999998654
No 47
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.3e-41 Score=377.97 Aligned_cols=278 Identities=31% Similarity=0.595 Sum_probs=221.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~- 184 (927)
++|++++.||+|+||+||+|.+..+++.||||+++... .....+.+|+++|+.+ .|+||++++++|...
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~ 87 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-------KHENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-------CCCchhhhhhhhcccc
Confidence 79999999999999999999999999999999997532 2345567899999988 589999999988643
Q ss_pred -----ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 185 -----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 185 -----~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
..+|+|+|+++++|.+++.. ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~---~~~~~kl~D 161 (343)
T cd07878 88 SIENFNEVYLVTNLMGADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILD 161 (343)
T ss_pred cccccCcEEEEeecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC---CCCCEEEcC
Confidence 35799999999898887754 3599999999999999999999999999999999999994 678899999
Q ss_pred cCCcccccccceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 260 FGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 260 FGlA~~~~~~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
||++..........++++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.+..+ .++....
T Consensus 162 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (343)
T cd07878 162 FGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVG-TPSPEVL 240 (343)
T ss_pred CccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC-CCCHHHH
Confidence 9999876666666789999999999987 4789999999999999999999999999888888888888888 3333332
Q ss_pred HHhhhc--chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 339 KEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 339 ~~~~~~--~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
...... ..+.... ..+....+..++
T Consensus 241 ~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~-------------- 267 (343)
T cd07878 241 KKISSEHARKYIQSL---------------------------------------PHMPQQDLKKIF-------------- 267 (343)
T ss_pred HhcchhhHHHHhhcc---------------------------------------ccccchhHHHhc--------------
Confidence 211100 0000000 000000111111
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
...++.++|||.+||++||++|||+.|+|+||||...
T Consensus 268 ---~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 268 ---RGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred ---cCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 1133568899999999999999999999999999874
No 48
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.5e-42 Score=378.32 Aligned_cols=246 Identities=25% Similarity=0.425 Sum_probs=204.1
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||.||+|++..+++.||||+++... .....+.+|+++|+.+ .|+||++++++|...+.+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~hp~i~~~~~~~~~~~~~~lv 73 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-------RHPFLTALKYSFQTHDRLCFV 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-------CCCCCCCEEEEEEcCCEEEEE
Confidence 36999999999999999999999999998532 2345567888988888 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+.+... ..+++..++.++.||+.||+|||++|||||||||+|||++ .++.+||+|||++...
T Consensus 74 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a~~~~~~ 148 (323)
T cd05571 74 MEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISD 148 (323)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCCcccccC
Confidence 99998 5787777654 4689999999999999999999999999999999999994 6788999999998643
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
.......+|++.|+|||++.+..++.++||||||||+|||++|+.||...+.......+.....
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~---------------- 212 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI---------------- 212 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC----------------
Confidence 2233456799999999999999999999999999999999999999987665444333221000
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
.+| ..++.++
T Consensus 213 ---------------------------------------------------------~~p-------------~~~~~~~ 222 (323)
T cd05571 213 ---------------------------------------------------------RFP-------------RTLSPEA 222 (323)
T ss_pred ---------------------------------------------------------CCC-------------CCCCHHH
Confidence 000 0123578
Q ss_pred HHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~ 458 (927)
.+||++||+.||++|+ ++.|+|+||||.+..+
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~ 259 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINW 259 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 8999999999999999 8999999999988654
No 49
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3e-41 Score=369.76 Aligned_cols=284 Identities=27% Similarity=0.476 Sum_probs=209.4
Q ss_pred EEEeccCCceeEEEeecc--CCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee--cceeEE
Q 002401 114 KDLLGHGTFGQVAKCWDA--EMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC--QRHLCI 189 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~--~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~--~~~l~L 189 (927)
.++||+|+||+||+|+++ .+++.||||+++.... ...+.+|+++|+++ .|+||++++++|.. ...+|+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~~~~~l 77 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLREL-------KHPNVISLQKVFLSHADRKVWL 77 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhc-------CCCCCcceeeeEecCCCcEEEE
Confidence 357999999999999865 4678999999975432 34567899999998 58999999999864 457899
Q ss_pred EEecccchhHHHHHhhc-------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec-CCCCeEEEeecC
Q 002401 190 CFELLDSNLYELIKINH-------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS-VKPAEIKIIDFG 261 (927)
Q Consensus 190 VmEy~~GsL~dlL~~~~-------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~-~~~g~IKL~DFG 261 (927)
||||++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+... ...+.+||+|||
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 78 LFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred EEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 99999999988876432 1248999999999999999999999999999999999999533 355789999999
Q ss_pred Cccccccc------ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHH
Q 002401 262 SACTEDRT------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASE---------FDLLRRM 325 (927)
Q Consensus 262 lA~~~~~~------~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~---------~d~l~~I 325 (927)
++...... ....++|+.|+|||++.+. .++.++||||||||+|||++|++||.+... .+.+..+
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07868 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 237 (317)
T ss_pred ceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHH
Confidence 99654322 2345779999999999875 689999999999999999999999975432 3667778
Q ss_pred HHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhC
Q 002401 326 IRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNY 405 (927)
Q Consensus 326 ~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~ 405 (927)
...+| .|....+.............. .+. ...+....+...+...
T Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~~~~~------------------------~~~----------~~~~~~~~~~~~~~~~ 282 (317)
T cd07868 238 FNVMG-FPADKDWEDIKKMPEHSTLMK------------------------DFR----------RNTYTNCSLIKYMEKH 282 (317)
T ss_pred HHhcC-CCChHHhHHHhhccchhhhhh------------------------hhh----------ccccCcccccchHHhc
Confidence 88888 555544443222111000000 000 0000000011111000
Q ss_pred CCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 406 PYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 406 P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
....+..++|||++||++||++|+|++|||+||||
T Consensus 283 -------------~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 283 -------------KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred -------------CCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 01123468899999999999999999999999998
No 50
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-42 Score=340.58 Aligned_cols=279 Identities=33% Similarity=0.564 Sum_probs=232.7
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|.-.++||+|.||+|+++++.++.+.||+|.++.+ +.....+++||-+|++|+ |.|||+++++...++.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk-------hknivrl~dvlhsdkk 75 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-------HKNIVRLHDVLHSDKK 75 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh-------hcceeehhhhhccCce
Confidence 566778999999999999999999999999999864 344567899999999995 6799999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+.||||||+.+|..++...+ +.++.+.++.++.|+++||.|+|++++.||||||.|+|| +.++++||+|||+++..
T Consensus 76 ltlvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglaraf 151 (292)
T KOG0662|consen 76 LTLVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAF 151 (292)
T ss_pred eEEeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhc
Confidence 99999999999999988776 569999999999999999999999999999999999999 57899999999999866
Q ss_pred cccce---eeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 267 DRTVY---SYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 267 ~~~~~---~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
+-... ..+-|.+|++|.++.+. -|+..+|+||.|||+.||.. |+++|++.+..+++.+|...+| .|.+..|+..
T Consensus 152 gipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg-~p~ed~wps~ 230 (292)
T KOG0662|consen 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG-TPTEDQWPSM 230 (292)
T ss_pred CCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhC-CCccccCCcc
Confidence 54443 34679999999999997 58999999999999999996 9999999999999999999999 6766554432
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
....+ |... ..|-....+..+++.
T Consensus 231 t~lpd-----------------------yk~y----------------p~ypattswsqivp~----------------- 254 (292)
T KOG0662|consen 231 TKLPD-----------------------YKPY----------------PIYPATTSWSQIVPK----------------- 254 (292)
T ss_pred ccCCC-----------------------Cccc----------------CCccccchHHHHhhh-----------------
Confidence 22211 1000 001111234444433
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
....-+||++++|..+|.+|++|+++|+||||.+.
T Consensus 255 lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 255 LNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 22356899999999999999999999999999864
No 51
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=378.93 Aligned_cols=252 Identities=24% Similarity=0.408 Sum_probs=212.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCC-eEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMN-SFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg-~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
++|++.++||+|+||.||+|++..++ ..||||++... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~Iv~~~~~~~~ 102 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-------NHPFCVNLYGSFKD 102 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-------CCCCCcceEEEEEe
Confidence 68999999999999999999876654 78999999743 23345677899999988 58999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+.+||||||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||+
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~ 177 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGF 177 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCC
Confidence 999999999997 5888888765 369999999999999999999999999999999999999 4678999999999
Q ss_pred cccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 263 ACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 263 A~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
+..........+||+.|+|||++.+..++.++||||||||+|||++|..||.+.+.......+.+...
T Consensus 178 a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~------------ 245 (340)
T PTZ00426 178 AKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII------------ 245 (340)
T ss_pred CeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC------------
Confidence 98766555667899999999999998999999999999999999999999987766554444332100
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
.+| ..+
T Consensus 246 -------------------------------------------------------------~~p-------------~~~ 251 (340)
T PTZ00426 246 -------------------------------------------------------------YFP-------------KFL 251 (340)
T ss_pred -------------------------------------------------------------CCC-------------CCC
Confidence 000 012
Q ss_pred HHHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF 458 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~ 458 (927)
+..+.+||++||+.||++|+ |++|+++||||.+..+
T Consensus 252 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~ 292 (340)
T PTZ00426 252 DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW 292 (340)
T ss_pred CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 34678999999999999996 8999999999998654
No 52
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-41 Score=372.16 Aligned_cols=257 Identities=28% Similarity=0.485 Sum_probs=221.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||.|.-|+||+|+...++..+|+|++.+.. ....++..|.+||..+ +||.++.||..|+.+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-------DHPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-------DHPFLPTLYASFETD 149 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-------CCCccchhhheeecc
Confidence 68999999999999999999999999999999998643 3345667788899888 799999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+..|||||||. |+|..+++.+..+.+++..++.++.+|+.||+|||-.|||+|||||||||| .++|.|.|+||.++
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS 226 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLS 226 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeecccc
Confidence 99999999998 588888888888889999999999999999999999999999999999999 57899999999987
Q ss_pred cccc------------------------------------c-----------------------cceeeccCCCCCCcch
Q 002401 264 CTED------------------------------------R-----------------------TVYSYIQSRYYRSPEV 284 (927)
Q Consensus 264 ~~~~------------------------------------~-----------------------~~~~~~gT~~Y~APEv 284 (927)
.... . .....+||-.|+|||+
T Consensus 227 ~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv 306 (459)
T KOG0610|consen 227 LRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV 306 (459)
T ss_pred ccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee
Confidence 2100 0 0112467888999999
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCcccc
Q 002401 285 LLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSI 364 (927)
Q Consensus 285 l~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i 364 (927)
+.+...+.++|.|+|||+|||||.|..||.|.+..+.+..|+. .++.
T Consensus 307 I~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~----~~l~----------------------------- 353 (459)
T KOG0610|consen 307 IRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG----QPLK----------------------------- 353 (459)
T ss_pred eecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc----CCCc-----------------------------
Confidence 9999999999999999999999999999999998888877764 1110
Q ss_pred CCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCC-
Q 002401 365 GGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWS- 443 (927)
Q Consensus 365 ~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpT- 443 (927)
+| ....++..++|||+++|..||.+|+.
T Consensus 354 ----------------------------------------Fp-----------~~~~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 354 ----------------------------------------FP-----------EEPEVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred ----------------------------------------CC-----------CCCcchhHHHHHHHHHhccChhhhhcc
Confidence 01 00123457899999999999999999
Q ss_pred ---HHHHHhCCCcCCCCCC
Q 002401 444 ---PFQASRHPFVTGEPFT 459 (927)
Q Consensus 444 ---A~EaLqHPwf~~~~~~ 459 (927)
|.||.+||||++..|.
T Consensus 383 ~rGA~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 383 KRGAAEIKRHPFFEGVNWA 401 (459)
T ss_pred ccchHHhhcCccccCCChh
Confidence 9999999999998774
No 53
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.3e-41 Score=377.93 Aligned_cols=206 Identities=23% Similarity=0.456 Sum_probs=178.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||+||+|++..+++.||||++++.. .....+.+|+.++.++ +|+||+++++++.+.
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-------~~~~iv~~~~~~~~~ 73 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-------DSLWVVKMFYSFQDK 73 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-------CCCCcceEEEEEecC
Confidence 47999999999999999999999999999999997532 2334567788888887 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
..+|||||||. ++|.+++... ..+++..++.++.||+.||+|||++|||||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla 148 (363)
T cd05628 74 LNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLC 148 (363)
T ss_pred CeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCc
Confidence 99999999997 5888888764 4699999999999999999999999999999999999994 6689999999998
Q ss_pred cccccc--------------------------------------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHH
Q 002401 264 CTEDRT--------------------------------------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAE 305 (927)
Q Consensus 264 ~~~~~~--------------------------------------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyE 305 (927)
...... ....+||+.|+|||++.+..++.++|||||||||||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~e 228 (363)
T cd05628 149 TGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (363)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHH
Confidence 642210 123578999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHH
Q 002401 306 LFLGLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 306 LlTG~~PF~g~s~~d~l~~I~ 326 (927)
|++|+.||.+.+..+...++.
T Consensus 229 ll~G~~Pf~~~~~~~~~~~i~ 249 (363)
T cd05628 229 MLIGYPPFCSETPQETYKKVM 249 (363)
T ss_pred HHhCCCCCCCCCHHHHHHHHH
Confidence 999999998877766655554
No 54
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.4e-41 Score=373.39 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=215.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||.||+|++..+++.||||+++... .....+.+|+++++.+ .|+||+++++++...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~iv~~~~~~~~~ 73 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-------KSEWLVKLLYAFQDD 73 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-------CCCCCccEEEEEEcC
Confidence 37999999999999999999999999999999998532 2345677888888888 489999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~a 148 (333)
T cd05600 74 EYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHIKLTDFGLS 148 (333)
T ss_pred CEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEEEeCcCC
Confidence 99999999997 5888888654 3689999999999999999999999999999999999994 6789999999999
Q ss_pred ccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 264 CTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 264 ~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
..........++++.|+|||++.+..++.++||||||||||||++|..||.+.+..+....+..... .
T Consensus 149 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~----------- 216 (333)
T cd05600 149 KGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKE-T----------- 216 (333)
T ss_pred cccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccc-c-----------
Confidence 7665555567899999999999999999999999999999999999999988776665554432111 0
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
.. .+. +.. ....++
T Consensus 217 -------~~--------------------------------~~~-----~~~----------------------~~~~~s 230 (333)
T cd05600 217 -------LQ--------------------------------RPV-----YDD----------------------PRFNLS 230 (333)
T ss_pred -------cc--------------------------------CCC-----CCc----------------------cccccC
Confidence 00 000 000 001234
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
.++.+||.+||..+|++|+|++|+++||||.+..+
T Consensus 231 ~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 231 DEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred HHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence 57899999999999999999999999999997644
No 55
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-41 Score=369.51 Aligned_cols=264 Identities=24% Similarity=0.381 Sum_probs=218.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.+.|++.+.||.|..++||+|+...++++||||++..++ ...+.+.+|++.|..+ +||||++++..|..+.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-------~HPNIv~~~~sFvv~~ 97 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-------DHPNIVTYHCSFVVDS 97 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-------CCCCcceEEEEEEecc
Confidence 479999999999999999999999999999999998543 3467788899999988 6999999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|+||.||. |+++++++..-..+++|..|..|++++++||.|||.+|.||||||+.|||| +.+|.|||+|||.+.
T Consensus 98 ~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa 174 (516)
T KOG0582|consen 98 ELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSA 174 (516)
T ss_pred eeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeee
Confidence 9999999998 799999999888889999999999999999999999999999999999999 588999999999873
Q ss_pred ccc---cc----ceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCCh
Q 002401 265 TED---RT----VYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335 (927)
Q Consensus 265 ~~~---~~----~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~ 335 (927)
... .. ....+++++|||||++... .|+.|+||||||++..||.+|..||.......++.. +..+ .||.
T Consensus 175 ~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~--tLqn-~pp~ 251 (516)
T KOG0582|consen 175 SLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL--TLQN-DPPT 251 (516)
T ss_pred eecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH--HhcC-CCCC
Confidence 211 11 1456899999999997654 799999999999999999999999976554443322 2222 3321
Q ss_pred HHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 336 ~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
-.. +..+
T Consensus 252 ~~t-------------------------------------------------------------------------~~~~ 258 (516)
T KOG0582|consen 252 LLT-------------------------------------------------------------------------SGLD 258 (516)
T ss_pred ccc-------------------------------------------------------------------------ccCC
Confidence 100 0000
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.......+..|++||..||+.||.+||||+++|+|+||+...
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 111223445899999999999999999999999999998764
No 56
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=360.48 Aligned_cols=254 Identities=28% Similarity=0.462 Sum_probs=215.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
.+|.-.+.||.|..++|.+|..+.++..+|+|+|... ....+....|+.||+++. +||+|+++.+
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~------GHP~II~l~D 90 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM------GHPYIIDLQD 90 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc------CCCcEEEeee
Confidence 6788889999999999999999999999999999631 233456678999999995 6999999999
Q ss_pred EEeecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 180 YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
+|+....+++|||+|. |.|+|++...- .++|++.+.|++||++|+.|||.++||||||||+|||+ +++.+|||+
T Consensus 91 ~yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~is 165 (411)
T KOG0599|consen 91 VYESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKIS 165 (411)
T ss_pred eccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEe
Confidence 9999999999999998 89999998764 69999999999999999999999999999999999999 577899999
Q ss_pred ecCCcccc--cccceeeccCCCCCCcchhcCC------CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 002401 259 DFGSACTE--DRTVYSYIQSRYYRSPEVLLGY------QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330 (927)
Q Consensus 259 DFGlA~~~--~~~~~~~~gT~~Y~APEvl~~~------~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG 330 (927)
|||+|+.. ++.....|||+.|+|||.+... .|+..+|+|++|||||.|+.|.+||......-++..|++.
T Consensus 166 DFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG-- 243 (411)
T KOG0599|consen 166 DFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG-- 243 (411)
T ss_pred ccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc--
Confidence 99999864 4566778999999999999643 5888999999999999999999999765554444444431
Q ss_pred CCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCC
Q 002401 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN 410 (927)
Q Consensus 331 ~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ 410 (927)
.|++- .
T Consensus 244 --------------------------------------kyqF~---------------------s--------------- 249 (411)
T KOG0599|consen 244 --------------------------------------KYQFR---------------------S--------------- 249 (411)
T ss_pred --------------------------------------ccccC---------------------C---------------
Confidence 11111 1
Q ss_pred CChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 411 ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
.++.+++...+|||.+||+.||.+|+|++|+|+||||..
T Consensus 250 ------peWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 250 ------PEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred ------cchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 123345567899999999999999999999999999954
No 57
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.9e-40 Score=361.27 Aligned_cols=282 Identities=32% Similarity=0.537 Sum_probs=221.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.++|+++++||+|+||.||+|++..+++.||||.++.. ......+.+|+.+++.+ +|+||+++++++...+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~nI~~~~~~~~~~~ 77 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-------KHANIVTLHDIIHTEK 77 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-------CCCCcceEEEEEecCC
Confidence 37899999999999999999999999999999998743 22334567899999988 5899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+|+||||+.++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||++..
T Consensus 78 ~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~ 153 (301)
T cd07873 78 SLTLVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLARA 153 (301)
T ss_pred eEEEEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcchhc
Confidence 999999999999988887643 4589999999999999999999999999999999999994 668899999999864
Q ss_pred ccc---cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 266 EDR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 266 ~~~---~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... ......++..|+|||++.+. .++.++|||||||++|||++|++||...+..+.+..+...++ .+.+..++..
T Consensus 154 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 232 (301)
T cd07873 154 KSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILG-TPTEETWPGI 232 (301)
T ss_pred cCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC-CCChhhchhh
Confidence 322 22234568899999998764 588999999999999999999999999888888888888877 4443333221
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
..... +.... .+ .+....+. .....
T Consensus 233 ~~~~~-~~~~~--------------------------------~~-----~~~~~~~~-----------------~~~~~ 257 (301)
T cd07873 233 LSNEE-FKSYN--------------------------------YP-----KYRADCLH-----------------NHAPR 257 (301)
T ss_pred hcccc-ccccc--------------------------------cC-----ccccccHH-----------------hhcCC
Confidence 11000 00000 00 00000000 01122
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
++..+.|||.+||++||.+|||++|+|+||||+..
T Consensus 258 ~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 258 LDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 44578999999999999999999999999999764
No 58
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.2e-41 Score=371.88 Aligned_cols=247 Identities=27% Similarity=0.453 Sum_probs=203.3
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||.||+|++..+++.||||++++. ......+.+|+++|+.+ .|+||+++++++...+.+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~~~~~lv 73 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-------RHPFLTSLKYSFQTKDRLCFV 73 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-------CCCCCcceEEEEEcCCEEEEE
Confidence 3699999999999999999999999999853 23345677888888887 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc--
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED-- 267 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~-- 267 (927)
|||+. ++|.+.+... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++....
T Consensus 74 ~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~~~~~~ 148 (328)
T cd05593 74 MEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITD 148 (328)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCCccCCCc
Confidence 99998 5777776554 3699999999999999999999999999999999999994 67899999999986432
Q ss_pred -ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 268 -RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 268 -~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
......++++.|+|||++.+..++.++|||||||+||+|++|+.||...+..+....+.. + ..
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--~-~~------------- 212 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--E-DI------------- 212 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc--C-Cc-------------
Confidence 223345789999999999998999999999999999999999999987665443332211 0 00
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
.+| ..++.++
T Consensus 213 ---------------------------------------------------------~~p-------------~~~~~~~ 222 (328)
T cd05593 213 ---------------------------------------------------------KFP-------------RTLSADA 222 (328)
T ss_pred ---------------------------------------------------------cCC-------------CCCCHHH
Confidence 000 0123568
Q ss_pred HHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCCC
Q 002401 427 VDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPFT 459 (927)
Q Consensus 427 ~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~~ 459 (927)
.+||++||+.||++|+ +++|+|+||||++..+.
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 260 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQ 260 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 8999999999999997 89999999999886543
No 59
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-42 Score=365.35 Aligned_cols=209 Identities=29% Similarity=0.430 Sum_probs=184.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE-EEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE-YFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~-~f~~~ 184 (927)
.+|+|+++||.|.||.||++++..+++.||.|.++- +....+....|+.+|++| .|||||++++ .|..+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-------~HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-------NHPNIVQYYAHSFIED 91 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-------CCchHHHHHHHhhhcc
Confidence 589999999999999999999999999999999973 345567788999999999 5899999998 45555
Q ss_pred ce-eEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhcc--CC--eeeccCCCCCEEEeecCCCCeEE
Q 002401 185 RH-LCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKD--AG--IIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 185 ~~-l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs--~g--IVHrDLKPeNILL~~~~~~g~IK 256 (927)
+. ++||||+|+ |+|.++++..+ .+.++|..+++++.|||.||..||. .. |+||||||.||+|+ .+|.+|
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~---~~gvvK 168 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT---ANGVVK 168 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc---CCCcee
Confidence 55 999999998 79999887654 4569999999999999999999998 45 99999999999995 779999
Q ss_pred EeecCCccccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 002401 257 IIDFGSACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR 327 (927)
Q Consensus 257 L~DFGlA~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~ 327 (927)
|+|||+++..... ..+++||++||+||++...+|+.|+|||||||++|||+.-.+||.+.+-.++.++|.+
T Consensus 169 LGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~q 242 (375)
T KOG0591|consen 169 LGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQ 242 (375)
T ss_pred eccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHc
Confidence 9999999876543 3467999999999999999999999999999999999999999999977776666654
No 60
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.5e-41 Score=377.47 Aligned_cols=255 Identities=24% Similarity=0.447 Sum_probs=209.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||+||+|++..+++.||||+++... .....+.+|+.+|+.+ +|+||++++++|...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-------~h~~iv~~~~~~~~~ 73 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-------DNPWVVKLYYSFQDE 73 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-------CCCCCcceEEEEEcC
Confidence 47999999999999999999999999999999998532 3344567799999888 489999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||++
T Consensus 74 ~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~ 148 (364)
T cd05599 74 NYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLC 148 (364)
T ss_pred CeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccc
Confidence 99999999997 5888888764 369999999999999999999999999999999999999 46789999999998
Q ss_pred cccccc-----------------------------------------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHH
Q 002401 264 CTEDRT-----------------------------------------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCI 302 (927)
Q Consensus 264 ~~~~~~-----------------------------------------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~I 302 (927)
...... ....+||+.|+|||++....++.++||||||||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i 228 (364)
T cd05599 149 TGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVI 228 (364)
T ss_pred eeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhH
Confidence 532110 112468999999999999899999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHh
Q 002401 303 VAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARE 382 (927)
Q Consensus 303 LyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~ 382 (927)
+|||++|..||...+..+.+..+..... . .
T Consensus 229 l~el~~G~~Pf~~~~~~~~~~~i~~~~~-~------------------~------------------------------- 258 (364)
T cd05599 229 MYEMLVGYPPFCSDNPQETYRKIINWKE-T------------------L------------------------------- 258 (364)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHcCCC-c------------------c-------------------------------
Confidence 9999999999988776555444432100 0 0
Q ss_pred hcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCC---HHHHHhCCCcCCCCC
Q 002401 383 LKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWS---PFQASRHPFVTGEPF 458 (927)
Q Consensus 383 ~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpT---A~EaLqHPwf~~~~~ 458 (927)
.+|. ...+++++.+||++||. ||.+|++ ++|+|+||||++..+
T Consensus 259 ---------------------~~~~-----------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~ 304 (364)
T cd05599 259 ---------------------QFPD-----------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDW 304 (364)
T ss_pred ---------------------CCCC-----------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence 0000 00134578899999997 9999998 999999999998654
No 61
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.2e-41 Score=370.32 Aligned_cols=252 Identities=24% Similarity=0.440 Sum_probs=207.5
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
|+++++||+|+||.||+|++..+++.||||++++.. ...+.+.+|++++..++. ..|+||+++++++...+.
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~----l~hp~i~~~~~~~~~~~~ 76 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS----ERHPFLVNLFACFQTEDH 76 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc----cCCCChhceeeEEEcCCE
Confidence 788999999999999999999999999999998532 234456677777766543 369999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+||||||+.+ +|...+.. ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 77 ~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~~kL~Dfg~~~~ 150 (324)
T cd05589 77 VCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGFVKIADFGLCKE 150 (324)
T ss_pred EEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCcEEeCcccCCcc
Confidence 9999999985 67666543 3599999999999999999999999999999999999994 678999999999864
Q ss_pred c---cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 E---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~---~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
. .......++++.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+..... .
T Consensus 151 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~-~---------- 219 (324)
T cd05589 151 GMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV-R---------- 219 (324)
T ss_pred CCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-C----------
Confidence 2 2223346789999999999998999999999999999999999999988776655544332100 0
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
+| ..+
T Consensus 220 --------------------------------------------------------------~p-------------~~~ 224 (324)
T cd05589 220 --------------------------------------------------------------YP-------------RFL 224 (324)
T ss_pred --------------------------------------------------------------CC-------------CCC
Confidence 00 012
Q ss_pred HHHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF 458 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~ 458 (927)
+..+.+||++||..||++|+ +++++++||||++..+
T Consensus 225 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~ 265 (324)
T cd05589 225 SREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW 265 (324)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence 34678999999999999999 7999999999987644
No 62
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=374.95 Aligned_cols=254 Identities=27% Similarity=0.422 Sum_probs=225.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
..-|.+.+.||+|.|++|.+|++..||+.||||+|.+. ......++.|++.|+.+ +|||||+||++....
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV-------QHpNiVRLYEViDTQ 89 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV-------QHPNIVRLYEVIDTQ 89 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh-------cCcCeeeeeehhccc
Confidence 36788999999999999999999999999999999764 34456788899999998 699999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
..+|||+|+-+ |+|+|+|.+.. .++.|+.++++++||+.|+.|||+..+|||||||+||++- .+-|.|||+|||++
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFS 166 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFS 166 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeecccc
Confidence 99999999998 59999998876 5799999999999999999999999999999999999886 56799999999999
Q ss_pred c--cccccceeeccCCCCCCcchhcCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 264 C--TEDRTVYSYIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 264 ~--~~~~~~~~~~gT~~Y~APEvl~~~~ys-~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
. ..++...+.||+..|-|||++++..|+ +++||||||||||.|++|++||...++.+.+..|+.+.- ..
T Consensus 167 Nkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY-tv------- 238 (864)
T KOG4717|consen 167 NKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY-TV------- 238 (864)
T ss_pred ccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc-cC-------
Confidence 5 356777889999999999999999998 689999999999999999999999988888887765322 11
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
..
T Consensus 239 ------------------------------------------------------------------------------Ps 240 (864)
T KOG4717|consen 239 ------------------------------------------------------------------------------PS 240 (864)
T ss_pred ------------------------------------------------------------------------------ch
Confidence 02
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.++.+++|||..||+.||++|.|.+||..|+|++...
T Consensus 241 hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 241 HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred hhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 3456889999999999999999999999999998753
No 63
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=373.88 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=205.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc--
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR-- 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~-- 185 (927)
.+|...+.||+|+||.||++.+.++++.+|||.+.... ...+...+|+.+|.+| .|||||++++......
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-------~~p~IV~~~G~~~~~~~~ 89 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL-------NHPNIVQYYGSSSSREND 89 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC-------CCCCEEeeCCccccccCe
Confidence 57888999999999999999999999999999997542 1245678999999999 4899999999755444
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC-CCeEEEeecCCc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK-PAEIKIIDFGSA 263 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~-~g~IKL~DFGlA 263 (927)
.++|+|||+. |+|.+++..... .|++..++.+++||++||+|||++|||||||||+|||++ . ++.+||+|||++
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~---~~~~~~KlaDFG~a 165 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD---PSNGDVKLADFGLA 165 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe---CCCCeEEeccCccc
Confidence 6999999998 699999988764 799999999999999999999999999999999999995 4 689999999999
Q ss_pred cccc------ccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 264 CTED------RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 264 ~~~~------~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
.... .......||+.|||||++... ....++|||||||++.||+||++||... .+....+..... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~-~~--- 239 (313)
T KOG0198|consen 166 KKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGR-ED--- 239 (313)
T ss_pred cccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhc-cC---
Confidence 7544 223457899999999999963 3345999999999999999999999653 111111111110 00
Q ss_pred HHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 337 ~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
..+.+|
T Consensus 240 ----------------------------------------------------------------~~P~ip---------- 245 (313)
T KOG0198|consen 240 ----------------------------------------------------------------SLPEIP---------- 245 (313)
T ss_pred ----------------------------------------------------------------CCCCCC----------
Confidence 000011
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
..++.+++|||.+||..||++||||+|+|+|||++...
T Consensus 246 ---~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 246 ---DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred ---cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 12446789999999999999999999999999998753
No 64
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.9e-40 Score=353.01 Aligned_cols=277 Identities=31% Similarity=0.501 Sum_probs=217.2
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++++.||+|+||.||+|++..+++.||||+++.. ......+.+|+.+++.+ +|+||+++++++..++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~ 73 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-------QHPNIVCLQDVLMQESR 73 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-------CCCCEeeeEEEEeeCCe
Confidence 588999999999999999999999999999998743 22345677899999998 48999999999999999
Q ss_pred eEEEEecccchhHHHHHhhcc-CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDSNLYELIKINHF-RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~-~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+||||+.++|.+++..... ..+++..++.++.||++||+|||+++|+|+||||+|||++ .++.+||+|||++..
T Consensus 74 ~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~ 150 (285)
T cd07861 74 LYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFGLARA 150 (285)
T ss_pred EEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECcccceee
Confidence 999999999999888865432 4689999999999999999999999999999999999994 678899999999864
Q ss_pred cccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... .....++..|+|||++.+. .++.++|||||||++|+|++|++||.+....+.+..+.+.++ .+.+..++..
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (285)
T cd07861 151 FGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILG-TPTEDVWPGV 229 (285)
T ss_pred cCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC-CCChhhhhcc
Confidence 3322 1223567889999998765 578999999999999999999999999888887777777776 3333332211
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.....+..... .+....+... ...
T Consensus 230 ~~~~~~~~~~~---------------------------------------~~~~~~~~~~-----------------~~~ 253 (285)
T cd07861 230 TSLPDYKNTFP---------------------------------------KWKKGSLRSA-----------------VKN 253 (285)
T ss_pred hhhHHHHhhcc---------------------------------------ccCcchhHHh-----------------cCC
Confidence 11111000000 0000000000 112
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
++.++++||++||+.||++|||++|||+||||
T Consensus 254 ~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 254 LDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 45678999999999999999999999999998
No 65
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.8e-41 Score=378.43 Aligned_cols=206 Identities=24% Similarity=0.459 Sum_probs=176.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||.||+|++..+++.||||++.+.. ...+.+.+|+++++.+ +|+||++++++|.+.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-------~hp~iv~~~~~~~~~ 73 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-------DSPWVVSLYYSFQDA 73 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-------CCCCcceEEEEEEcC
Confidence 37999999999999999999999999999999997532 2345567788888887 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+++||||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~DfGla 148 (377)
T cd05629 74 QYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLSDFGLS 148 (377)
T ss_pred CeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEeecccc
Confidence 99999999997 6888888654 4689999999999999999999999999999999999994 6789999999998
Q ss_pred cccccc--------------------------------------------------ceeeccCCCCCCcchhcCCCCCch
Q 002401 264 CTEDRT--------------------------------------------------VYSYIQSRYYRSPEVLLGYQYTTA 293 (927)
Q Consensus 264 ~~~~~~--------------------------------------------------~~~~~gT~~Y~APEvl~~~~ys~k 293 (927)
+..... ....+||+.|+|||++.+..++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 228 (377)
T cd05629 149 TGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQE 228 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCc
Confidence 521100 012468999999999999899999
Q ss_pred hHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002401 294 IDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 294 sDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~ 326 (927)
+||||||||||||++|.+||.+.+..+.+..+.
T Consensus 229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~ 261 (377)
T cd05629 229 CDWWSLGAIMFECLIGWPPFCSENSHETYRKII 261 (377)
T ss_pred eeeEecchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999998877665555443
No 66
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.4e-40 Score=367.57 Aligned_cols=252 Identities=25% Similarity=0.427 Sum_probs=208.6
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+|++++.||+|+||.||+|++..+++.||||++++. ....+.+..|++++..+. .|++|++++++|...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~~i~~~~~~~~~~~ 74 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG------KPPFLTQLHSCFQTMD 74 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC------CCCceeeeEEEEEcCC
Confidence 588999999999999999999999999999999853 233456677888887774 2567999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+||||||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++.
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~ 149 (324)
T cd05587 75 RLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCK 149 (324)
T ss_pred EEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcce
Confidence 9999999997 5888777654 3589999999999999999999999999999999999994 66889999999986
Q ss_pred cc---cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~---~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.. .......+|+..|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+.+...
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~----------- 218 (324)
T cd05587 150 ENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV----------- 218 (324)
T ss_pred ecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------
Confidence 42 2333456789999999999999999999999999999999999999988776655554432100
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.+| ..
T Consensus 219 --------------------------------------------------------------~~~-------------~~ 223 (324)
T cd05587 219 --------------------------------------------------------------SYP-------------KS 223 (324)
T ss_pred --------------------------------------------------------------CCC-------------CC
Confidence 000 01
Q ss_pred hHHHHHHHHHhccccCcCCCCCH-----HHHHhCCCcCCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSP-----FQASRHPFVTGEPF 458 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA-----~EaLqHPwf~~~~~ 458 (927)
++..+++||++||..||++|+++ +++++||||....+
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 224 LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 23468899999999999999986 89999999987543
No 67
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.4e-41 Score=374.36 Aligned_cols=256 Identities=25% Similarity=0.465 Sum_probs=212.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.++||+|+||+||+|++..+++.||||+++... .....+.+|++++..+ .|+||+++++++.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~ 73 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-------DSPWIVKLYYSFQDE 73 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-------CCCCccchhhheecC
Confidence 47999999999999999999999999999999998532 3345677888888888 489999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+++||||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||||+ .++.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~kL~Dfg~~ 148 (350)
T cd05573 74 EHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLC 148 (350)
T ss_pred CeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEeecCCCC
Confidence 99999999997 5888888765 4699999999999999999999999999999999999994 6789999999998
Q ss_pred cccccc--------------------------------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCC
Q 002401 264 CTEDRT--------------------------------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLP 311 (927)
Q Consensus 264 ~~~~~~--------------------------------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~ 311 (927)
...... .....+|+.|+|||++.+..++.++||||||||||||++|+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~ 228 (350)
T cd05573 149 KKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP 228 (350)
T ss_pred ccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCC
Confidence 654322 234568999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcc
Q 002401 312 LFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391 (927)
Q Consensus 312 PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~ 391 (927)
||...+..+...++..... ..
T Consensus 229 Pf~~~~~~~~~~~i~~~~~-------------------~~---------------------------------------- 249 (350)
T cd05573 229 PFYSDTLQETYNKIINWKE-------------------SL---------------------------------------- 249 (350)
T ss_pred CCCCCCHHHHHHHHhccCC-------------------cc----------------------------------------
Confidence 9988776555444432111 00
Q ss_pred cccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCC-HHHHHhCCCcCCCCCC
Q 002401 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWS-PFQASRHPFVTGEPFT 459 (927)
Q Consensus 392 ~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpT-A~EaLqHPwf~~~~~~ 459 (927)
.+|. ...+++.+.+||.+||. ||++|++ ++|+|+||||++..+.
T Consensus 250 ------------~~p~-----------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~~ 294 (350)
T cd05573 250 ------------RFPP-----------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDWE 294 (350)
T ss_pred ------------cCCC-----------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCHH
Confidence 0000 00134578999999998 9999999 9999999999986553
No 68
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-40 Score=368.64 Aligned_cols=196 Identities=23% Similarity=0.410 Sum_probs=167.5
Q ss_pred ceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCC-----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQ-----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~---~tg~~VAIKiik~~-----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
+|+++++||+|+||.||+|++. .+++.||||++++. ....+.+..|+++|+.++ +|++|+++++++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~~i~~~~~~~ 74 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR------QSPFLVTLHYAF 74 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc------CCCCcccEEEEE
Confidence 4889999999999999998764 57899999999753 223445677899998885 489999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
...+.+||||||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+||
T Consensus 75 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Df 149 (332)
T cd05614 75 QTEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDF 149 (332)
T ss_pred ecCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeC
Confidence 99999999999998 5888887654 3599999999999999999999999999999999999994 6689999999
Q ss_pred CCccccc----ccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 261 GSACTED----RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 261 GlA~~~~----~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
|+++... ......+||..|+|||++.+. .++.++||||||||||||++|+.||...
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 9986432 122345789999999999875 4889999999999999999999999643
No 69
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-40 Score=376.35 Aligned_cols=204 Identities=24% Similarity=0.434 Sum_probs=175.2
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.|+++++||+|+||+||+|++..+++.||||++++.. .....+.+|+++|+.+ +|+||+++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-------~h~~iv~l~~~~~~~~ 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-------DNEWVVKLYYSFQDKD 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-------CCCCeeeeEEEEecCC
Confidence 6899999999999999999999999999999997532 3345677899999888 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
++||||||+. ++|.+++... ..+++..++.++.||+.||+|||++|||||||||+|||++ ..+.+||+|||++.
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~~ 149 (381)
T cd05626 75 NLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLCT 149 (381)
T ss_pred EEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCCc
Confidence 9999999997 5888888664 3689999999999999999999999999999999999994 67899999999874
Q ss_pred cccc--------------------------------------------------cceeeccCCCCCCcchhcCCCCCchh
Q 002401 265 TEDR--------------------------------------------------TVYSYIQSRYYRSPEVLLGYQYTTAI 294 (927)
Q Consensus 265 ~~~~--------------------------------------------------~~~~~~gT~~Y~APEvl~~~~ys~ks 294 (927)
.... .....+||+.|+|||++.+..++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~ 229 (381)
T cd05626 150 GFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLC 229 (381)
T ss_pred ccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCcc
Confidence 2110 01234789999999999998999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 295 DMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 295 DIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
||||||||||||++|..||...+..+....+
T Consensus 230 DiwSlG~il~elltG~~Pf~~~~~~~~~~~i 260 (381)
T cd05626 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLKV 260 (381)
T ss_pred ceeehhhHHHHHHhCCCCCcCCCHHHHHHHH
Confidence 9999999999999999999877655544433
No 70
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9.1e-41 Score=367.10 Aligned_cols=243 Identities=27% Similarity=0.502 Sum_probs=202.0
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||+|+||.||+|++..+++.||||+++.. ......+.+|+.+|+.+ +|+||++++++|...+.+|||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~~~lv~e 73 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-------NCPFIVPLKFSFQSPEKLYLVLA 73 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-------CCCcEeceeeEEecCCeEEEEEc
Confidence 79999999999999999999999999753 23345667899998888 58999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc---c
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED---R 268 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~---~ 268 (927)
|+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||++.... .
T Consensus 74 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~ 148 (312)
T cd05585 74 FINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDD 148 (312)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCC
Confidence 998 5888888654 369999999999999999999999999999999999999 467899999999986432 2
Q ss_pred cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhh
Q 002401 269 TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFF 348 (927)
Q Consensus 269 ~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f 348 (927)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+... +.
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~----~~-------------- 210 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE----PL-------------- 210 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC----CC--------------
Confidence 233457899999999999999999999999999999999999999876655444333210 00
Q ss_pred hhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHH
Q 002401 349 KCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVD 428 (927)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~D 428 (927)
.+| ..++..+.+
T Consensus 211 -------------------------------------------------------~~~-------------~~~~~~~~~ 222 (312)
T cd05585 211 -------------------------------------------------------RFP-------------DGFDRDAKD 222 (312)
T ss_pred -------------------------------------------------------CCC-------------CcCCHHHHH
Confidence 000 012357889
Q ss_pred HHHhccccCcCCCC---CHHHHHhCCCcCCCC
Q 002401 429 FLKGLVEFDPAKRW---SPFQASRHPFVTGEP 457 (927)
Q Consensus 429 LI~kML~~DP~kRp---TA~EaLqHPwf~~~~ 457 (927)
||.+||..||++|+ ++.|+|+||||.+..
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~ 254 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence 99999999999997 589999999999754
No 71
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=8.5e-41 Score=377.72 Aligned_cols=204 Identities=25% Similarity=0.447 Sum_probs=175.3
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+|+++++||+|+||+||+|++..+++.||||++.+.. .....+.+|+++++.+ +|+||++++++|...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-------~h~~iv~~~~~~~~~~ 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-------DNEWVVRLYYSFQDKD 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-------CCCcCCeEEEEEEeCC
Confidence 6899999999999999999999999999999997542 2345677899999888 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|||||||. |+|.+++... ..+++..++.++.||+.||+|||+++||||||||+|||++ .++.+||+|||++.
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~kL~DFGla~ 149 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCT 149 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEeECCCCc
Confidence 9999999997 5888887654 3689999999999999999999999999999999999994 67899999999974
Q ss_pred cccc--------------------------------------------------cceeeccCCCCCCcchhcCCCCCchh
Q 002401 265 TEDR--------------------------------------------------TVYSYIQSRYYRSPEVLLGYQYTTAI 294 (927)
Q Consensus 265 ~~~~--------------------------------------------------~~~~~~gT~~Y~APEvl~~~~ys~ks 294 (927)
.... .....+||+.|+|||++.+..|+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~ 229 (382)
T cd05625 150 GFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC 229 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCee
Confidence 2100 01124689999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 295 DMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 295 DIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
||||||||||||++|++||.+.+..+...++
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i 260 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKV 260 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999887765544443
No 72
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-40 Score=377.59 Aligned_cols=283 Identities=24% Similarity=0.415 Sum_probs=215.0
Q ss_pred CCceEEEEEeccCCceeEEEeec--cCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWD--AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d--~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
..+|+++++||+|+||.||+|.. ..+++.||||++.... ...+|+++|+.| .|+||++++++|....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l-------~h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTI-------SHRAIINLIHAYRWKS 159 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhc-------CCCCccceeeeEeeCC
Confidence 36899999999999999999964 3456889999987542 345799999998 5899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+|+|||++.++|.+++... ..+++..++.++.||+.||+|||++|||||||||+|||++ ..+.+||+|||+++.
T Consensus 160 ~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~---~~~~~~l~DfG~a~~ 234 (392)
T PHA03207 160 TVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD---EPENAVLGDFGAACK 234 (392)
T ss_pred EEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEccCccccc
Confidence 99999999999999988433 4699999999999999999999999999999999999994 678999999999965
Q ss_pred cccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCCChHH
Q 002401 266 EDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS---EFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 266 ~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s---~~d~l~~I~~~lG~~PP~~~ 337 (927)
.... .....+|..|+|||++.+..|+.++||||||||||||++|+.||.+.. ..+.+..+++.++..+.+..
T Consensus 235 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 235 LDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred cCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 4322 224578999999999999899999999999999999999999997653 35666777776663332211
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
........+.+.. +.. .. +..+ .+...+
T Consensus 315 ~~~~~~~~~~~~~---------------------------~~~--~~-----~~~~---~~~~~~--------------- 342 (392)
T PHA03207 315 QNGSTNLCKHFKQ---------------------------YAI--VL-----RPPY---TIPPVI--------------- 342 (392)
T ss_pred CccchhHHHHHHh---------------------------hcc--cc-----cCCc---cccchh---------------
Confidence 0000000000000 000 00 0000 000111
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
.....+.++.+||++||.+||++|||+.|+|+||||++.+.
T Consensus 343 ~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 343 RKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred hccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 11123457889999999999999999999999999988654
No 73
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=9.8e-41 Score=368.74 Aligned_cols=247 Identities=26% Similarity=0.448 Sum_probs=204.3
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||.||+|+++.+++.||||++++.. ...+.+..|+.++..+. .|+||+++++++...+.+|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~h~~iv~~~~~~~~~~~~~iv 74 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR------NHPFLTQLYCCFQTPDRLFFV 74 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc------CCCchhceeeEEEcCCEEEEE
Confidence 36999999999999999999999999998532 23455667888877663 489999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~~~~~~~ 149 (320)
T cd05590 75 MEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGIFN 149 (320)
T ss_pred EcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeCCCCeecCcC
Confidence 99998 5888777654 3699999999999999999999999999999999999994 6789999999998642
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
........|++.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+..... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~-~-------------- 214 (320)
T cd05590 150 GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-V-------------- 214 (320)
T ss_pred CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC-C--------------
Confidence 2223345789999999999988999999999999999999999999988776655544432000 0
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
+| ..++.++
T Consensus 215 ----------------------------------------------------------~~-------------~~~~~~~ 223 (320)
T cd05590 215 ----------------------------------------------------------YP-------------TWLSQDA 223 (320)
T ss_pred ----------------------------------------------------------CC-------------CCCCHHH
Confidence 00 0123478
Q ss_pred HHHHHhccccCcCCCCCH------HHHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRWSP------FQASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRpTA------~EaLqHPwf~~~~~ 458 (927)
++||++||+.||++|+++ +++++||||+...+
T Consensus 224 ~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 224 VDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred HHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 899999999999999998 99999999987654
No 74
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.7e-40 Score=374.14 Aligned_cols=203 Identities=24% Similarity=0.433 Sum_probs=175.0
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+|+++++||+|+||.||+|++..+++.||||++.+.. .....+.+|+++|+++ .|+||+++++.|..++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-------~h~~iv~~~~~~~~~~ 74 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-------DNEWVVKLYYSFQDKD 74 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-------CCCCcceEEEEEEcCC
Confidence 7999999999999999999999999999999997532 2345577899999988 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|||||||. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||+|.
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~ikL~DFG~a~ 149 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCT 149 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCEEEEeCCCCc
Confidence 9999999997 6888888764 3589999999999999999999999999999999999994 67899999999974
Q ss_pred cccc----------------------------------------------cceeeccCCCCCCcchhcCCCCCchhHHHH
Q 002401 265 TEDR----------------------------------------------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWS 298 (927)
Q Consensus 265 ~~~~----------------------------------------------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWS 298 (927)
.... .....+||+.|+|||++.+..++.++||||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 229 (376)
T cd05598 150 GFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 229 (376)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeee
Confidence 2100 011247899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002401 299 FGCIVAELFLGLPLFPGASEFDLLRR 324 (927)
Q Consensus 299 LG~ILyELlTG~~PF~g~s~~d~l~~ 324 (927)
||||||||++|+.||.+.+..+....
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~~ 255 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQLK 255 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHHH
Confidence 99999999999999988776554443
No 75
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6.6e-40 Score=358.32 Aligned_cols=287 Identities=31% Similarity=0.494 Sum_probs=224.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.++||+|+||.||+|++..+++.||||+++... .......+|+.+++++ .|+||+++++++...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~ 78 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-------RHPNIVELKEVVVGK 78 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-------CCCCCcceEEEEecC
Confidence 378999999999999999999999999999999997432 2223456799999988 589999999999765
Q ss_pred --ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 185 --RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 185 --~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
+.+++||||+.++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ ..+.+||+|||+
T Consensus 79 ~~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~ 154 (309)
T cd07845 79 HLDSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGL 154 (309)
T ss_pred CCCeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccce
Confidence 5689999999999988887643 4689999999999999999999999999999999999994 668999999999
Q ss_pred ccccccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 263 ACTEDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 263 A~~~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
+...... ......+..|+|||++.+. .++.++|||||||++|||++|++||...+..+.+..+...++ .+...++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~-~~~~~~~ 233 (309)
T cd07845 155 ARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLG-TPNESIW 233 (309)
T ss_pred eeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCChhhc
Confidence 9654322 2223457789999998764 689999999999999999999999999999999999998888 4444433
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
+...... .. ..+.+ ....+ ..+...
T Consensus 234 ~~~~~~~----------~~----------~~~~~----------------~~~~~--~~~~~~----------------- 258 (309)
T cd07845 234 PGFSDLP----------LV----------GKFTL----------------PKQPY--NNLKHK----------------- 258 (309)
T ss_pred hhhhccc----------cc----------ccccc----------------cCCCC--CchHHh-----------------
Confidence 3211100 00 00000 00000 000000
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCP 461 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~~ 461 (927)
....++.+.|||.+||++||++|||++|+|+||||++.+++++
T Consensus 259 ~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~ 301 (309)
T cd07845 259 FPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCE 301 (309)
T ss_pred ccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCC
Confidence 0113457889999999999999999999999999999887765
No 76
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.4e-40 Score=367.88 Aligned_cols=246 Identities=24% Similarity=0.410 Sum_probs=202.9
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
+.||+|+||.||++++..+++.||+|+++.. ......+.+|+++++.+ .||||++++++|...+.+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~i~~~~~~~~~~~~~~lv 73 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-------RHPFLTALKYAFQTHDRLCFV 73 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-------CCCCCcceeeEEecCCEEEEE
Confidence 4699999999999999999999999999853 22344566788888888 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc--
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED-- 267 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~-- 267 (927)
|||++ ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 74 ~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~ 148 (323)
T cd05595 74 MEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISD 148 (323)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEecccHHhccccCC
Confidence 99998 5777776554 3689999999999999999999999999999999999994 66889999999986421
Q ss_pred -ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 268 -RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 268 -~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
.......+++.|+|||++.+..++.++|||||||+||||++|+.||...+..+....+.....
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~---------------- 212 (323)
T cd05595 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------------- 212 (323)
T ss_pred CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----------------
Confidence 222345789999999999998999999999999999999999999987665544433321000
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
.+| ..+++.+
T Consensus 213 ---------------------------------------------------------~~p-------------~~~~~~~ 222 (323)
T cd05595 213 ---------------------------------------------------------RFP-------------RTLSPEA 222 (323)
T ss_pred ---------------------------------------------------------CCC-------------CCCCHHH
Confidence 000 0123578
Q ss_pred HHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~ 458 (927)
.+||++||+.||++|+ ++.|+|+||||.+..+
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~ 259 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 259 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 8999999999999998 9999999999987553
No 77
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.4e-40 Score=357.90 Aligned_cols=283 Identities=28% Similarity=0.472 Sum_probs=206.7
Q ss_pred EEeccCCceeEEEeecc--CCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee--cceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDA--EMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC--QRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~--~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~--~~~l~LV 190 (927)
.+||+|+||.||+|++. .+++.||+|.++.... ...+.+|+++|+.+ .|+||+++++++.. ...+|+|
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLREL-------KHPNVIALQKVFLSHSDRKVWLL 78 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhC-------CCCCeeeEEEEEeccCCCeEEEE
Confidence 57999999999999854 4668899999875432 34567899999998 58999999999864 4678999
Q ss_pred EecccchhHHHHHhhc-------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec-CCCCeEEEeecCC
Q 002401 191 FELLDSNLYELIKINH-------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS-VKPAEIKIIDFGS 262 (927)
Q Consensus 191 mEy~~GsL~dlL~~~~-------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~-~~~g~IKL~DFGl 262 (927)
|||++++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||+..+ ...+.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 9999999988876432 1248899999999999999999999999999999999999533 3567899999999
Q ss_pred ccccccc------ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHH
Q 002401 263 ACTEDRT------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASE---------FDLLRRMI 326 (927)
Q Consensus 263 A~~~~~~------~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~---------~d~l~~I~ 326 (927)
++..... .....+|..|+|||++.+. .++.++|||||||++|||+||++||....+ .+.+.++.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 9754322 2234678999999999874 589999999999999999999999975432 34566677
Q ss_pred HHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCC
Q 002401 327 RILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYP 406 (927)
Q Consensus 327 ~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P 406 (927)
..++ .+....++.......+........ ...+....+...+...
T Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~- 282 (317)
T cd07867 239 SVMG-FPADKDWEDIRKMPEYPTLQKDFR----------------------------------RTTYANSSLIKYMEKH- 282 (317)
T ss_pred HhcC-CCChhhhhhhhhcccchhhhhhhc----------------------------------ccccCCchhhhhhhcc-
Confidence 7777 444433333222211111100000 0000000111111100
Q ss_pred CCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 407 YRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 407 ~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
....+..+++||.+||+.||++|||++|||+||||
T Consensus 283 ------------~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 283 ------------KVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred ------------cCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 01123568999999999999999999999999998
No 78
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.7e-40 Score=365.07 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=208.0
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+|+++++||+|+||.||+|++..+++.||||++++.. ........|+.++..+. .|++|+++++++...+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~~i~~~~~~~~~~~ 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG------KPPFLTQLHSCFQTMD 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc------CCCeEeeEEEEEecCC
Confidence 5889999999999999999999999999999998542 22334556777776653 4789999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+||||||+. ++|.+.+... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++.
T Consensus 75 ~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kL~DfG~~~ 149 (323)
T cd05616 75 RLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCK 149 (323)
T ss_pred EEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcEEEccCCCce
Confidence 9999999997 5888777654 3689999999999999999999999999999999999994 67899999999986
Q ss_pred ccc---ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~---~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... ......+|++.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+.+... .
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~-~--------- 219 (323)
T cd05616 150 ENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-A--------- 219 (323)
T ss_pred ecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-C---------
Confidence 432 223345789999999999999999999999999999999999999988776665555443100 0
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
+| ..
T Consensus 220 ---------------------------------------------------------------~p-------------~~ 223 (323)
T cd05616 220 ---------------------------------------------------------------YP-------------KS 223 (323)
T ss_pred ---------------------------------------------------------------CC-------------Cc
Confidence 00 01
Q ss_pred hHHHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF 458 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~ 458 (927)
++.++.+||.+||+.||++|++ ..++++||||....+
T Consensus 224 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~ 265 (323)
T cd05616 224 MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 265 (323)
T ss_pred CCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence 2346889999999999999998 489999999987553
No 79
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.7e-40 Score=366.34 Aligned_cols=247 Identities=24% Similarity=0.405 Sum_probs=204.7
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||.||+|++..+++.||||+++.. ....+.+..|++++..+. +|+||++++++|...+.+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~------~hp~i~~~~~~~~~~~~~~lv 74 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA------KHPFLTALHCCFQTKDRLFFV 74 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc------CCCCccceeeEEEcCCeEEEE
Confidence 3699999999999999999999999999853 233445667888887663 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~---~~~~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 75 MEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD---AEGHCKLADFGMCKEGILN 149 (321)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeecccceecccC
Confidence 99998 5787777654 3689999999999999999999999999999999999994 6789999999998642
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
.......+++..|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..+....- .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-~-------------- 214 (321)
T cd05591 150 GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV-L-------------- 214 (321)
T ss_pred CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-C--------------
Confidence 2223345789999999999998999999999999999999999999988877666555432100 0
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
+| ..++.++
T Consensus 215 ----------------------------------------------------------~p-------------~~~~~~~ 223 (321)
T cd05591 215 ----------------------------------------------------------YP-------------VWLSKEA 223 (321)
T ss_pred ----------------------------------------------------------CC-------------CCCCHHH
Confidence 00 0123468
Q ss_pred HHHHHhccccCcCCCC-------CHHHHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRW-------SPFQASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRp-------TA~EaLqHPwf~~~~~ 458 (927)
.+||++||+.||++|+ +++++++||||....+
T Consensus 224 ~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~ 262 (321)
T cd05591 224 VSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW 262 (321)
T ss_pred HHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence 8999999999999999 9999999999987544
No 80
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.1e-40 Score=368.68 Aligned_cols=256 Identities=22% Similarity=0.377 Sum_probs=208.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~----~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.++||+|+||+||+|++..+++.||||+++.... ....+.+|+.+++.+ .|+||+++++++...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-------~~~~i~~~~~~~~~~ 73 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-------NSPWIPQLQYAFQDK 73 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-------CCCCCcceeeEEecC
Confidence 479999999999999999999999999999999985432 344566788888776 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||++ ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ ..+.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~kL~Dfg~a 149 (330)
T cd05601 74 DNLYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHIKLADFGSA 149 (330)
T ss_pred CeEEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCEEeccCCCC
Confidence 99999999997 68888887653 4699999999999999999999999999999999999994 6789999999999
Q ss_pred cccccc----ceeeccCCCCCCcchhc------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 264 CTEDRT----VYSYIQSRYYRSPEVLL------GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 264 ~~~~~~----~~~~~gT~~Y~APEvl~------~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
...... .....+|+.|+|||++. ...++.++||||||||+|||++|+.||...+..+.+.++.....
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--- 226 (330)
T cd05601 150 ARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR--- 226 (330)
T ss_pred eECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC---
Confidence 654322 12346899999999997 44688999999999999999999999987766555444432100
Q ss_pred ChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCCh
Q 002401 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSM 413 (927)
Q Consensus 334 P~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~ 413 (927)
.. .+|.
T Consensus 227 -----------------~~---------------------------------------------------~~~~------ 232 (330)
T cd05601 227 -----------------FL---------------------------------------------------KFPE------ 232 (330)
T ss_pred -----------------cc---------------------------------------------------CCCC------
Confidence 00 0000
Q ss_pred hhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 414 EDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 414 e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
...++..+++||++||. ||++|+|++++++||||....+
T Consensus 233 -----~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~ 271 (330)
T cd05601 233 -----DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDW 271 (330)
T ss_pred -----CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence 01234578999999998 9999999999999999987544
No 81
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-39 Score=360.24 Aligned_cols=201 Identities=31% Similarity=0.489 Sum_probs=176.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|+++++||+|+||.||++++..++..||+|+++.. ......+.+|+++|+++ +|+||+++++++...+.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~ 77 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-------NSPYIVGFYGAFYSDGE 77 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-------CCCCCCeEEEEEEECCE
Confidence 7999999999999999999999999999999999753 34456788999999998 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC-CeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~-gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
++|||||+. ++|.+++... ..+++..++.++.||+.||.|||++ +|+||||||+|||++ .++.+||+|||++.
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~ 152 (331)
T cd06649 78 ISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVSG 152 (331)
T ss_pred EEEEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCcccc
Confidence 999999998 4888888664 3589999999999999999999986 699999999999994 66889999999986
Q ss_pred ccc-ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002401 265 TED-RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321 (927)
Q Consensus 265 ~~~-~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~ 321 (927)
... .......++..|+|||++.+..++.++|||||||+||||++|+.||......+.
T Consensus 153 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~ 210 (331)
T cd06649 153 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210 (331)
T ss_pred cccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 543 223345789999999999998999999999999999999999999987665443
No 82
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-40 Score=367.73 Aligned_cols=246 Identities=26% Similarity=0.429 Sum_probs=201.1
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
+.||+|+||.||+|++..+++.||||+++... .......+|+++++.+ .|+||++++++|...+.+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-------~hp~i~~~~~~~~~~~~~~lv 73 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-------RHPFLTALKYSFQTHDRLCFV 73 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-------CCCCCCceEEEEEcCCEEEEE
Confidence 46999999999999999999999999998532 2334566788888777 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc--
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE-- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~-- 266 (927)
|||+. ++|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||++...
T Consensus 74 ~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 74 MEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIK 148 (325)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCC
Confidence 99998 5777766544 368999999999999999999997 799999999999999 46789999999998642
Q ss_pred -cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcc
Q 002401 267 -DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTS 345 (927)
Q Consensus 267 -~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~ 345 (927)
.......++++.|+|||++.+..++.++||||||||||||++|+.||.+.+..+....+....-
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~--------------- 213 (325)
T cd05594 149 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--------------- 213 (325)
T ss_pred CCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC---------------
Confidence 2223345789999999999998999999999999999999999999987665444333211000
Q ss_pred hhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHH
Q 002401 346 KFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLA 425 (927)
Q Consensus 346 ~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~ 425 (927)
.+| ..++++
T Consensus 214 ----------------------------------------------------------~~p-------------~~~~~~ 222 (325)
T cd05594 214 ----------------------------------------------------------RFP-------------RTLSPE 222 (325)
T ss_pred ----------------------------------------------------------CCC-------------CCCCHH
Confidence 000 012357
Q ss_pred HHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCC
Q 002401 426 LVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF 458 (927)
Q Consensus 426 l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~ 458 (927)
+.+||++||+.||++|+ ++.|+|+||||.+..+
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 260 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW 260 (325)
T ss_pred HHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence 88999999999999997 9999999999997544
No 83
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3e-40 Score=373.02 Aligned_cols=256 Identities=22% Similarity=0.386 Sum_probs=209.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||.||+|++..+++.||||++++.. .....+.+|+.+++.+ +|+||+++++++...
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-------~h~~iv~~~~~~~~~ 115 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-------NSEWIVQLHYAFQDD 115 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-------CCCCcceEEEEEecC
Confidence 68999999999999999999999999999999997532 2234466788888887 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+. ++|.+++... .+++..++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~ 189 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTC 189 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccce
Confidence 99999999997 5788877653 48999999999999999999999999999999999999 46789999999999
Q ss_pred cccccc----ceeeccCCCCCCcchhcCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCCh
Q 002401 264 CTEDRT----VYSYIQSRYYRSPEVLLGY----QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335 (927)
Q Consensus 264 ~~~~~~----~~~~~gT~~Y~APEvl~~~----~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~ 335 (927)
...... ....+||+.|+|||++.+. .++.++|||||||+||||++|+.||.+.+....+.+|..... .
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-~--- 265 (370)
T cd05596 190 MKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN-S--- 265 (370)
T ss_pred eeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-c---
Confidence 654321 2345789999999999754 478999999999999999999999988776555544432100 0
Q ss_pred HHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 336 ~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
. .+|
T Consensus 266 ---------------~----------------------------------------------------~~~--------- 269 (370)
T cd05596 266 ---------------L----------------------------------------------------TFP--------- 269 (370)
T ss_pred ---------------C----------------------------------------------------CCC---------
Confidence 0 000
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCC--CCCHHHHHhCCCcCCCCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAK--RWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~k--RpTA~EaLqHPwf~~~~~~ 459 (927)
....++.++.+||++||..+|++ |+|++|+|+||||++..+.
T Consensus 270 --~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~ 313 (370)
T cd05596 270 --DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWT 313 (370)
T ss_pred --CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCChh
Confidence 00123457899999999999998 9999999999999986543
No 84
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.3e-40 Score=372.06 Aligned_cols=205 Identities=24% Similarity=0.417 Sum_probs=176.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.++||+|+||.||+|++..+++.||+|++++.. .....+.+|+.+++.+ +||||+++++++..+
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-------~hp~iv~~~~~~~~~ 115 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-------NSPWVVQLFCAFQDD 115 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-------CCCCEeeEEEEEEcC
Confidence 68999999999999999999999999999999997522 2234566788888877 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+. ++|.+++... .+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~~kL~DFG~a 189 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTC 189 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEEecccc
Confidence 99999999997 5888888654 489999999999999999999999999999999999994 6789999999999
Q ss_pred cccccc----ceeeccCCCCCCcchhcCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002401 264 CTEDRT----VYSYIQSRYYRSPEVLLGYQ----YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 264 ~~~~~~----~~~~~gT~~Y~APEvl~~~~----ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~ 326 (927)
...... ....+||+.|+|||++.+.. ++.++|||||||+||||++|+.||.+.+....+.+|.
T Consensus 190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~ 260 (370)
T cd05621 190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 260 (370)
T ss_pred eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 754322 23457899999999997643 7889999999999999999999998877665555443
No 85
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.1e-40 Score=371.57 Aligned_cols=205 Identities=25% Similarity=0.480 Sum_probs=176.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++++.||+|+||.||+|++..+++.||||+++.. ......+..|+.++..+ +|++|+++++.|...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~iv~~~~~~~~~ 73 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-------DGAWVVKMFYSFQDK 73 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-------CCCCEeeEEEEEEcC
Confidence 4789999999999999999999999999999999743 22345567788888877 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+++||||||+. ++|.+++... ..+++..++.++.||+.||+|||++|||||||||+|||+ +.++.+||+|||++
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~ 148 (360)
T cd05627 74 RNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLC 148 (360)
T ss_pred CEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCC
Confidence 99999999997 5888888654 369999999999999999999999999999999999999 46789999999998
Q ss_pred cccccc--------------------------------------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHH
Q 002401 264 CTEDRT--------------------------------------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAE 305 (927)
Q Consensus 264 ~~~~~~--------------------------------------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyE 305 (927)
...... ....+||+.|+|||++.+..++.++|||||||||||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilye 228 (360)
T cd05627 149 TGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (360)
T ss_pred cccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeee
Confidence 532110 123478999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHH
Q 002401 306 LFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 306 LlTG~~PF~g~s~~d~l~~I 325 (927)
|++|+.||.+.+..+.+.++
T Consensus 229 l~tG~~Pf~~~~~~~~~~~i 248 (360)
T cd05627 229 MLIGYPPFCSETPQETYRKV 248 (360)
T ss_pred cccCCCCCCCCCHHHHHHHH
Confidence 99999999887766555444
No 86
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=9.4e-40 Score=351.16 Aligned_cols=276 Identities=32% Similarity=0.532 Sum_probs=215.0
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.++||+|+||.||+|++..+++.||+|+++... .....+.+|+++++.+ +|+||+++++++.+...
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-------~h~~i~~~~~~~~~~~~ 73 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-------KHKNIVRLYDVLHSDKK 73 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-------CCCCeeeHHHHhccCCc
Confidence 5899999999999999999999999999999997532 2234567899999988 58999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+|+|+||++++|.+++.... ..+++..++.++.||++||.|||+++|+|+||||+||+++ .++.+||+|||++...
T Consensus 74 ~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~ 149 (284)
T cd07839 74 LTLVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLARAF 149 (284)
T ss_pred eEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhhcc
Confidence 99999999999988876543 4599999999999999999999999999999999999994 6688999999998653
Q ss_pred ccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPL-FPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~P-F~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... .....++..|+|||++.+. .++.++|||||||++|+|++|..| |.+.+..+.+..+.+.++ .++...+...
T Consensus 150 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 228 (284)
T cd07839 150 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG-TPTEESWPGV 228 (284)
T ss_pred CCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhC-CCChHHhHHh
Confidence 322 2234568899999998775 478999999999999999998766 566677777888887777 4433322211
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.....+ .... .+-....+.+. ...
T Consensus 229 ~~~~~~-~~~~--------------------------------------~~~~~~~~~~~-----------------~~~ 252 (284)
T cd07839 229 SKLPDY-KPYP--------------------------------------MYPATTSLVNV-----------------VPK 252 (284)
T ss_pred hhcccc-cccC--------------------------------------CCCCcchhhhh-----------------ccc
Confidence 111000 0000 00000000111 112
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
.+.++.|||++||..||.+|||++|+|+||||
T Consensus 253 ~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 253 LNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 45688999999999999999999999999998
No 87
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.9e-39 Score=342.41 Aligned_cols=252 Identities=33% Similarity=0.501 Sum_probs=208.5
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHH---HHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ---ALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~---~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
|+++++||+|+||+||++++..+++.||+|++......... ..+|+.+++.+ .|+||+++++++.....+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-------~~~~i~~~~~~~~~~~~~ 73 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-------RHPNIVQILDVFQDDNYL 73 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-------TBTTBCHEEEEEEESSEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-------cccccccccccccccccc
Confidence 88999999999999999999999999999999976533332 34589999999 389999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc-
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT- 265 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~- 265 (927)
++|||++.+ +|.+++... ..+++..++.++.||++||++||+++|+|+||||+||++ +.++.++|+|||.+..
T Consensus 74 ~~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 74 YIVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKL 148 (260)
T ss_dssp EEEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEES
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence 999999997 899988833 468999999999999999999999999999999999999 4778999999999964
Q ss_pred --ccccceeeccCCCCCCcchhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 --EDRTVYSYIQSRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 --~~~~~~~~~gT~~Y~APEvl~-~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.........++..|+|||++. +..++.++|||||||++|+|++|..||......+....+.+......+.
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------- 221 (260)
T PF00069_consen 149 SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS------- 221 (260)
T ss_dssp TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH-------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc-------
Confidence 233444567889999999998 7789999999999999999999999998775445544444332200000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
........
T Consensus 222 ------------------------------------------------------------------------~~~~~~~~ 229 (260)
T PF00069_consen 222 ------------------------------------------------------------------------SSQQSREK 229 (260)
T ss_dssp ------------------------------------------------------------------------HTTSHTTS
T ss_pred ------------------------------------------------------------------------cccccchh
Confidence 00000011
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
...+.+||++||..||++|||+.|+++||||
T Consensus 230 ~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 230 SEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred HHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 2578999999999999999999999999998
No 88
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-41 Score=348.32 Aligned_cols=252 Identities=25% Similarity=0.431 Sum_probs=222.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.++|++.+.||+|-||.||+|+.++++-.||+|++.+.. ....++.+|++|-..| .||||+++|++|.+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-------~hpnilrlY~~fhd 93 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-------RHPNILRLYGYFHD 93 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-------CCccHHhhhhheec
Confidence 478999999999999999999999999999999997643 3345677788888777 58999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
...+||++||.. |.|+..|.......+++.....+++|++.||.|||.++||||||||+|+|+ ...+.+||+|||-
T Consensus 94 ~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGw 170 (281)
T KOG0580|consen 94 SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGW 170 (281)
T ss_pred cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCc
Confidence 999999999997 799999998777889999999999999999999999999999999999999 4678999999999
Q ss_pred cccc-cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 263 ACTE-DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 263 A~~~-~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
+... .....+.|||..|.+||...+..++.++|+|++|++.||++.|.+||...+..+..++|.++-- .
T Consensus 171 sV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~-~--------- 240 (281)
T KOG0580|consen 171 SVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL-K--------- 240 (281)
T ss_pred eeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc-c---------
Confidence 8655 4556778999999999999999999999999999999999999999998887777777765321 0
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
+| ..
T Consensus 241 ---------------------------------------------------------------~p-------------~~ 244 (281)
T KOG0580|consen 241 ---------------------------------------------------------------FP-------------ST 244 (281)
T ss_pred ---------------------------------------------------------------CC-------------cc
Confidence 00 12
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
++..+.|||.+||..+|.+|.+..|+++|||+..
T Consensus 245 is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 245 ISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred cChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 3457889999999999999999999999999975
No 89
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.8e-39 Score=361.27 Aligned_cols=291 Identities=30% Similarity=0.534 Sum_probs=224.0
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.+.||+|+||.||+|++..+++.||||++.+. ......+.+|+.+++.+ .|+||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~ 87 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-------NHKNIIGLLNVFTPQ 87 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-------CCCCCcceeeeeccC
Confidence 37999999999999999999999999999999998642 33345677899999988 589999999998754
Q ss_pred ------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 185 ------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 185 ------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
.+.||||||+.++|.+.+... +++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+
T Consensus 88 ~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~---~~~~~kL~ 160 (353)
T cd07850 88 KSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKIL 160 (353)
T ss_pred CCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEc
Confidence 357999999999998887542 89999999999999999999999999999999999994 66889999
Q ss_pred ecCCcccccccc--eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 259 DFGSACTEDRTV--YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 259 DFGlA~~~~~~~--~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
|||++....... ....++..|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+.++.+.++ .|+..
T Consensus 161 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~ 239 (353)
T cd07850 161 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLG-TPSDE 239 (353)
T ss_pred cCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcC-CCCHH
Confidence 999997654332 234678899999999999999999999999999999999999999988889999999888 55554
Q ss_pred HHHHhhhcch-hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 337 VLKEAKNTSK-FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 337 ~l~~~~~~~~-~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
+......... +..... .+....+.+++....+....
T Consensus 240 ~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~---- 276 (353)
T cd07850 240 FMSRLQPTVRNYVENRP---------------------------------------KYAGYSFEELFPDVLFPPDS---- 276 (353)
T ss_pred HHHHhhhhhhHHhhcCC---------------------------------------CCCCcchhhhCcccccCccc----
Confidence 4433221111 111000 00001111111110000000
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.......+..+++||.+||++||++|||+.|||+||||+..
T Consensus 277 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 277 ESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred ccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 00012234578999999999999999999999999999854
No 90
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=9.1e-40 Score=353.97 Aligned_cols=257 Identities=26% Similarity=0.378 Sum_probs=208.7
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.|++.++||+|+||+||++.+..+++.||||++.... .....+.+|+.+++.+ +|+||+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~ 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-------NSRFVVSLAYAYETKD 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-------CCCCEeeeeeeecCCC
Confidence 4889999999999999999999999999999997532 2234467799999988 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|+||||+. ++|.+.+.......+++..++.++.||+.||+|||+.+|+||||||+||+++ +.+.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~Dfg~~~ 150 (285)
T cd05605 74 ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHIRISDLGLAV 150 (285)
T ss_pred eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCEEEeeCCCce
Confidence 9999999997 5777777654445699999999999999999999999999999999999994 66889999999986
Q ss_pred cccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 265 TEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 265 ~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....+++..|+|||++.+..++.++|||||||++|||++|..||.+.........+...+...++
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------- 222 (285)
T cd05605 151 EIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE-------- 222 (285)
T ss_pred ecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc--------
Confidence 5432 223347889999999999889999999999999999999999999876544333332221110000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
.+ ...+
T Consensus 223 -------------------------------------------------------------~~-------------~~~~ 228 (285)
T cd05605 223 -------------------------------------------------------------EY-------------SEKF 228 (285)
T ss_pred -------------------------------------------------------------cc-------------Cccc
Confidence 00 0113
Q ss_pred HHHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF 458 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~ 458 (927)
+..+.+||.+||..||++|+ +++++++||||....+
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05605 229 SEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANF 269 (285)
T ss_pred CHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCH
Confidence 35688999999999999999 9999999999998654
No 91
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.8e-40 Score=367.42 Aligned_cols=191 Identities=26% Similarity=0.394 Sum_probs=167.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.+++.+ .|+||+++++++...+..|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNV-------NHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhC-------CCCCCcChhheEEeCCeeE
Confidence 5799999999999999999999999999999986543 234688999888 5899999999999999999
Q ss_pred EEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc-
Q 002401 189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED- 267 (927)
Q Consensus 189 LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~- 267 (927)
+|||++.++|.+++.... ..+++..++.|+.||+.||+|||+++||||||||+|||+ +..+.+||+|||++....
T Consensus 134 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 134 MVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EEEEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCcccccccc
Confidence 999999999999887643 569999999999999999999999999999999999999 466889999999996432
Q ss_pred -ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhC-CCCCCC
Q 002401 268 -RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLG-LPLFPG 315 (927)
Q Consensus 268 -~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG-~~PF~g 315 (927)
.......+|..|+|||++.+..++.++|||||||+||||+++ .++|..
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~ 259 (357)
T PHA03209 210 APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFED 259 (357)
T ss_pred CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccC
Confidence 223345789999999999999999999999999999999985 445543
No 92
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-39 Score=359.78 Aligned_cols=247 Identities=29% Similarity=0.484 Sum_probs=201.2
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||.||+|+++.+++.||||+++... ........|+.++..+. +|+||+++++++...+++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~~i~~~~~~~~~~~~~~lv 74 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW------ENPFLTHLYCTFQTKEHLFFV 74 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc------CCCCccCeeEEEEeCCEEEEE
Confidence 46999999999999999999999999998542 23345566777766542 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 75 MEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFG 149 (316)
T ss_pred ECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCCeecccC
Confidence 99998 5787777654 4689999999999999999999999999999999999994 6688999999998642
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
.......+|+..|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+.....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~---------------- 213 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP---------------- 213 (316)
T ss_pred CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC----------------
Confidence 2233456789999999999999999999999999999999999999987766544443321000
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
.+| ..++.++
T Consensus 214 ---------------------------------------------------------~~~-------------~~~~~~~ 223 (316)
T cd05620 214 ---------------------------------------------------------HYP-------------RWITKES 223 (316)
T ss_pred ---------------------------------------------------------CCC-------------CCCCHHH
Confidence 000 0123467
Q ss_pred HHHHHhccccCcCCCCCH-HHHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRWSP-FQASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRpTA-~EaLqHPwf~~~~~ 458 (927)
.+||++||+.||++|+++ +++++||||....+
T Consensus 224 ~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~ 256 (316)
T cd05620 224 KDILEKLFERDPTRRLGVVGNIRGHPFFKTINW 256 (316)
T ss_pred HHHHHHHccCCHHHcCCChHHHHcCCCcCCCCH
Confidence 899999999999999998 58889999987543
No 93
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.6e-39 Score=350.62 Aligned_cols=282 Identities=31% Similarity=0.544 Sum_probs=220.9
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh------hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA------YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~------~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
+|++.++||+|+||.||+|.+..+++.||||+++.... ....+..|+++++.+ .|+||+++++++..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~ 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-------KHPNIIGLLDVFGH 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-------CCCCChhhhheeec
Confidence 58899999999999999999999999999999975422 234566788888888 48999999999999
Q ss_pred cceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 184 QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 184 ~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.+.+++||||+.++|.+++.... ..+++..++.++.||++||+|||+++|+|+||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~ 149 (298)
T cd07841 74 KSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLA 149 (298)
T ss_pred CCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceee
Confidence 99999999999889998887653 3699999999999999999999999999999999999995 5688999999999
Q ss_pred cccccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHH
Q 002401 264 CTEDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 264 ~~~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
...... .....++..|+|||.+.+. .++.++|||||||++|||++|.++|.+.+..+.+.++.+.++ .+....+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (298)
T cd07841 150 RSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALG-TPTEENWP 228 (298)
T ss_pred eeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcC-CCchhhhh
Confidence 654322 2233557789999998654 678999999999999999999999998888888888877766 34333332
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
.......+.... ......+..++
T Consensus 229 ~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~----------------- 251 (298)
T cd07841 229 GVTSLPDYVEFK----------------------------------------PFPPTPLKQIF----------------- 251 (298)
T ss_pred hccccccccccc----------------------------------------ccCCcchhhhc-----------------
Confidence 111111000000 00000111111
Q ss_pred hhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCC
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTC 460 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~ 460 (927)
...+..+++||.+||.+||++|||+.|+|+|+||++.+.+.
T Consensus 252 ~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~ 292 (298)
T cd07841 252 PAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT 292 (298)
T ss_pred ccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence 12345789999999999999999999999999999976544
No 94
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.8e-39 Score=345.02 Aligned_cols=278 Identities=33% Similarity=0.571 Sum_probs=220.7
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.+.||+|+||.||+|++..+++.||||++... ......+.+|+.+++.+ .|+||+++++++.....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~~~ 73 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-------QHPYVVKLLDVFPHGSG 73 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-------CCCCCcceeeEEecCCe
Confidence 589999999999999999999999999999999754 23346788899999988 48999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+++||||+.++|.+++.... ..+++..++.++.||++||+|||+++|+|+||||+||+++ ..+.++|+|||++...
T Consensus 74 ~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~~~~ 149 (286)
T cd07832 74 FVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLARLF 149 (286)
T ss_pred eEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeecccc
Confidence 99999999879999887654 5699999999999999999999999999999999999995 5788999999998754
Q ss_pred ccc----ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 267 DRT----VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 267 ~~~----~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... .....++..|+|||++.+. .++.++|||||||++|||++|.++|.+..+.+.+..+.+.++ .+....+...
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 228 (286)
T cd07832 150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLG-TPNEETWPGL 228 (286)
T ss_pred cCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcC-CCChHHHhhc
Confidence 332 2345678899999998765 578999999999999999999999999888888888888877 4433333321
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.....+ .... . + .-....+.++. ..
T Consensus 229 ~~~~~~-~~~~-----------~---------------------~-----~~~~~~~~~~~-----------------~~ 253 (286)
T cd07832 229 TSLPDY-NKIT-----------F---------------------P-----ESKPIPLEEIF-----------------PD 253 (286)
T ss_pred cCcchh-hccc-----------C---------------------C-----CCCcchHHHhC-----------------CC
Confidence 111000 0000 0 0 00000111111 12
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVT 454 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~ 454 (927)
.+..+++||++||..||++|||++|+|+||||+
T Consensus 254 ~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 254 ASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 336889999999999999999999999999995
No 95
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-39 Score=360.07 Aligned_cols=247 Identities=23% Similarity=0.440 Sum_probs=198.6
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHH-HHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSI-LTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~i-L~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
++||+|+||+||+|++..+++.||||++.... .....+..|..+ ++.+ .|+||+++++++...+.+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-------~hp~iv~~~~~~~~~~~~~l 73 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-------KHPFLVGLHYSFQTADKLYF 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-------CCCCCCCeeEEEEeCCEEEE
Confidence 46999999999999999999999999997532 122333444443 3334 69999999999999999999
Q ss_pred EEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc--
Q 002401 190 CFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE-- 266 (927)
Q Consensus 190 VmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~-- 266 (927)
||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 74 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~Dfg~~~~~~~ 148 (323)
T cd05575 74 VLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGIE 148 (323)
T ss_pred EEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeccCCCccccc
Confidence 999998 5787777654 3689999999999999999999999999999999999994 6789999999998642
Q ss_pred -cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcc
Q 002401 267 -DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTS 345 (927)
Q Consensus 267 -~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~ 345 (927)
.......+|++.|+|||++.+..++.++|||||||++|||++|..||...+..+....+....-
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--------------- 213 (323)
T cd05575 149 HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL--------------- 213 (323)
T ss_pred CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC---------------
Confidence 2223345789999999999999999999999999999999999999987765554444332000
Q ss_pred hhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHH
Q 002401 346 KFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLA 425 (927)
Q Consensus 346 ~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~ 425 (927)
... ..++..
T Consensus 214 ------------------------------------------------------------~~~-----------~~~~~~ 222 (323)
T cd05575 214 ------------------------------------------------------------RLK-----------PNISVS 222 (323)
T ss_pred ------------------------------------------------------------CCC-----------CCCCHH
Confidence 000 012346
Q ss_pred HHHHHHhccccCcCCCCCH----HHHHhCCCcCCCCCC
Q 002401 426 LVDFLKGLVEFDPAKRWSP----FQASRHPFVTGEPFT 459 (927)
Q Consensus 426 l~DLI~kML~~DP~kRpTA----~EaLqHPwf~~~~~~ 459 (927)
+.+||++||+.||++|+++ .|+++||||....+.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~ 260 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWD 260 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHH
Confidence 8899999999999999998 699999999876543
No 96
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.4e-39 Score=346.88 Aligned_cols=277 Identities=31% Similarity=0.565 Sum_probs=219.8
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
.|++++.||.|+||.||+|++..+++.||||+++.+. .....+.+|+++++++ +|+||+++++++...+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~ 73 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-------NHPNIVKLLDVIHTENK 73 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-------CCCCCcchhhhcccCCc
Confidence 4889999999999999999999999999999987532 2335677899999998 58999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+++||||+.++|.+++.......+++..++.++.||+.||+|||+++|+|+||+|+||+++ .++.+||+|||++...
T Consensus 74 ~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~dfg~~~~~ 150 (284)
T cd07860 74 LYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAF 150 (284)
T ss_pred EEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEeeccchhhc
Confidence 9999999998898888776556799999999999999999999999999999999999994 6688999999998644
Q ss_pred ccc---ceeeccCCCCCCcchhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~~-ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
... .....++..|+|||++.+.. ++.++|||||||++|||+||+.||.+.++.+.+.++.+.++ .++..++....
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 229 (284)
T cd07860 151 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG-TPDEVVWPGVT 229 (284)
T ss_pred ccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhC-CCChhhhhhhh
Confidence 322 22335678899999987654 68899999999999999999999999988888888888877 44444333211
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
....+-.... .+....+..++ ..+
T Consensus 230 ~~~~~~~~~~---------------------------------------~~~~~~~~~~~-----------------~~~ 253 (284)
T cd07860 230 SLPDYKPSFP---------------------------------------KWARQDFSKVV-----------------PPL 253 (284)
T ss_pred HHHHHHhhcc---------------------------------------cccccCHHHHc-----------------ccC
Confidence 1100000000 00001111111 123
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+..+++||.+||+.||++|||++|+|+||||
T Consensus 254 ~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 254 DEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 4578899999999999999999999999998
No 97
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=9.3e-40 Score=360.35 Aligned_cols=247 Identities=25% Similarity=0.422 Sum_probs=203.3
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||+||+|++..+++.||||++++.. .......+|+++++.+. .|+||+++++++...+.+|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~------~h~~i~~~~~~~~~~~~~~lv 74 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG------KHPFLTQLHSCFQTKDRLFFV 74 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc------CCCCccceeeEEEcCCEEEEE
Confidence 46999999999999999999999999998532 33455667888887774 489999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+.+... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~ 149 (318)
T cd05570 75 MEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADFGMCKEGILG 149 (318)
T ss_pred EcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEecccCCCeecCcC
Confidence 99997 5777776654 3699999999999999999999999999999999999994 6789999999998542
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
.......+++..|+|||++.+..++.++||||||||+|+|++|+.||.+.+..+....+.....
T Consensus 150 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~---------------- 213 (318)
T cd05570 150 GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV---------------- 213 (318)
T ss_pred CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC----------------
Confidence 2223345789999999999999999999999999999999999999987765544433321000
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
.+| ..++..+
T Consensus 214 ---------------------------------------------------------~~~-------------~~~~~~~ 223 (318)
T cd05570 214 ---------------------------------------------------------RYP-------------RWLSKEA 223 (318)
T ss_pred ---------------------------------------------------------CCC-------------CcCCHHH
Confidence 000 0123468
Q ss_pred HHHHHhccccCcCCCCCH-----HHHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRWSP-----FQASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRpTA-----~EaLqHPwf~~~~~ 458 (927)
.+||++||..||++|+|+ .++++||||+...+
T Consensus 224 ~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 224 KSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 899999999999999999 99999999988544
No 98
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.7e-39 Score=346.98 Aligned_cols=280 Identities=32% Similarity=0.545 Sum_probs=217.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.+.||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.+. +|+||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~------~~~~i~~~~~~~~~~~ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS------ESIYIVRLLDVEHVEE 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc------CCCCccceeeeEeecC
Confidence 47999999999999999999999999999999987532 22356778999999985 3799999999998776
Q ss_pred e-----eEEEEecccchhHHHHHhhcc---CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEE
Q 002401 186 H-----LCICFELLDSNLYELIKINHF---RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257 (927)
Q Consensus 186 ~-----l~LVmEy~~GsL~dlL~~~~~---~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL 257 (927)
. +|+||||++++|.+++..... ..+++..++.++.||++||+|||+++|+||||||+||+++ ...+.+||
T Consensus 75 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~--~~~~~~kl 152 (295)
T cd07837 75 KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD--KQKGLLKI 152 (295)
T ss_pred CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe--cCCCeEEE
Confidence 5 899999999999888865432 3589999999999999999999999999999999999995 23689999
Q ss_pred eecCCccccccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 258 IDFGSACTEDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 258 ~DFGlA~~~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
+|||++...... .....+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.++.+.+.++.+.++ .+
T Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~ 231 (295)
T cd07837 153 ADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLG-TP 231 (295)
T ss_pred eecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC-CC
Confidence 999998643221 1223567889999998764 679999999999999999999999999888888888877766 44
Q ss_pred ChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCCh
Q 002401 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSM 413 (927)
Q Consensus 334 P~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~ 413 (927)
+...+........+... + .+....+...
T Consensus 232 ~~~~~~~~~~~~~~~~~-----------------------------------~-----~~~~~~~~~~------------ 259 (295)
T cd07837 232 TEQVWPGVSKLRDWHEF-----------------------------------P-----QWKPQDLSRA------------ 259 (295)
T ss_pred ChhhCcchhhccchhhc-----------------------------------C-----cccchhHHHh------------
Confidence 43332211111000000 0 0000000010
Q ss_pred hhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcC
Q 002401 414 EDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVT 454 (927)
Q Consensus 414 e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~ 454 (927)
...++..+.+||.+||..||++|||++|+|+||||+
T Consensus 260 -----~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 260 -----VPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred -----ccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 112456789999999999999999999999999995
No 99
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.3e-39 Score=359.14 Aligned_cols=247 Identities=29% Similarity=0.498 Sum_probs=200.2
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||.||+|++..+++.||||+++... ...+....|..++..+. .|+||+++++++...+.+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~hp~i~~~~~~~~~~~~~~lv 74 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAW------EHPFLTHLFCTFQTKEHLFFV 74 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhcc------CCCCccceeeEEEcCCEEEEE
Confidence 36999999999999999999999999998532 22334455666665442 599999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 75 MEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCKENMNG 149 (316)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCCeECCCC
Confidence 99997 5787777654 3699999999999999999999999999999999999994 6689999999999643
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+.....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~---------------- 213 (316)
T cd05592 150 EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP---------------- 213 (316)
T ss_pred CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC----------------
Confidence 2223345789999999999998999999999999999999999999988776555444321000
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
.+| ..++.++
T Consensus 214 ---------------------------------------------------------~~~-------------~~~~~~~ 223 (316)
T cd05592 214 ---------------------------------------------------------HFP-------------RWISKEA 223 (316)
T ss_pred ---------------------------------------------------------CCC-------------CCCCHHH
Confidence 000 0123467
Q ss_pred HHHHHhccccCcCCCCCH-HHHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRWSP-FQASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRpTA-~EaLqHPwf~~~~~ 458 (927)
.+||++||+.||++|+++ +++++||||....+
T Consensus 224 ~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05592 224 KDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW 256 (316)
T ss_pred HHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence 899999999999999986 58889999987543
No 100
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.6e-39 Score=363.53 Aligned_cols=251 Identities=26% Similarity=0.388 Sum_probs=198.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
.+|+++++||+|+||.||+|++..+++.||||++... ......+.+|+++|+.+ +|+||+++++++...+.
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~ 146 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV-------NHPNVVKCHDMFDHNGE 146 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-------CCCCcceeeeEeccCCe
Confidence 6788999999999999999999999999999999753 34456788999999988 58999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+||||+.+ +|.+. ..+.+..++.++.||+.||+|||+++||||||||+|||++ .++.+||+|||++..
T Consensus 147 ~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~ 217 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRI 217 (353)
T ss_pred EEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccccccee
Confidence 9999999985 44321 2367888999999999999999999999999999999994 668999999999975
Q ss_pred cccc---ceeeccCCCCCCcchhcCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGY-----QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~-----~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
.... ....+++..|+|||++... ..+.++||||||||||||++|+.||......+....+.......+
T Consensus 218 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---- 293 (353)
T PLN00034 218 LAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP---- 293 (353)
T ss_pred cccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC----
Confidence 4322 2345789999999988532 345689999999999999999999964322211111111000000
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
+ .
T Consensus 294 ------------------------------------------------~------------------------------~ 295 (353)
T PLN00034 294 ------------------------------------------------P------------------------------E 295 (353)
T ss_pred ------------------------------------------------C------------------------------C
Confidence 0 0
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
....++.++++||++||..||++|||++|+|+||||.+..
T Consensus 296 ~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 296 APATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred CCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 0012335789999999999999999999999999999864
No 101
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2e-39 Score=358.01 Aligned_cols=247 Identities=29% Similarity=0.501 Sum_probs=201.9
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
+.||+|+||+||+|++..+++.||||+++... ........|..++..+. +||||+++++++...+.+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~hp~iv~~~~~~~~~~~~~lv 74 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW------EHPFLTHLYCTFQTKENLFFV 74 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc------CCCcCcceEEEEEeCCEEEEE
Confidence 46999999999999999999999999998542 23344566777776542 599999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 75 MEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLG 149 (316)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCC
Confidence 99997 5888887654 3589999999999999999999999999999999999994 6688999999998642
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
.......++|..|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+... . +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-~--~------------- 213 (316)
T cd05619 150 DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD-N--P------------- 213 (316)
T ss_pred CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-C--C-------------
Confidence 22334557899999999999989999999999999999999999999877655544433210 0 0
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
.+| ..++..+
T Consensus 214 ---------------------------------------------------------~~~-------------~~~~~~~ 223 (316)
T cd05619 214 ---------------------------------------------------------CYP-------------RWLTREA 223 (316)
T ss_pred ---------------------------------------------------------CCC-------------ccCCHHH
Confidence 000 0122467
Q ss_pred HHHHHhccccCcCCCCCHH-HHHhCCCcCCCCC
Q 002401 427 VDFLKGLVEFDPAKRWSPF-QASRHPFVTGEPF 458 (927)
Q Consensus 427 ~DLI~kML~~DP~kRpTA~-EaLqHPwf~~~~~ 458 (927)
.+||.+||+.||++|+++. ++++||||+...+
T Consensus 224 ~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05619 224 KDILVKLFVREPERRLGVKGDIRQHPFFREIDW 256 (316)
T ss_pred HHHHHHHhccCHhhcCCChHHHHcCcccCCCCH
Confidence 8999999999999999996 9999999988654
No 102
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.5e-39 Score=360.67 Aligned_cols=190 Identities=24% Similarity=0.415 Sum_probs=165.4
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||.||+|++..+++.||||++++. ......+..|+.+++.+. +||||++++++|...+.+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~------~hp~Iv~~~~~~~~~~~~~lv 74 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS------NHPFLVGLHSCFQTESRLFFV 74 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc------CCCCCCceEEEEEcCCEEEEE
Confidence 3699999999999999999999999999853 223445677888888774 489999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 75 IEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCKEGIRP 149 (329)
T ss_pred EeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCccccccccC
Confidence 99998 5787777554 4699999999999999999999999999999999999994 6688999999998642
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
.......+||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 2333456789999999999999999999999999999999999999953
No 103
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2e-39 Score=350.38 Aligned_cols=191 Identities=27% Similarity=0.452 Sum_probs=163.4
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||+|+||+||+|++..+++.||||++.... ...+.+..|+++++.+ +|+||++++++|..+..+|||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-------~~~~i~~~~~~~~~~~~~~lv~e 73 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-------HSRFIVSLAYAFQTKTDLCLVMT 73 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-------CCCcEeeeeEEEcCCCeEEEEEe
Confidence 799999999999999999999999997532 2234567799999888 58999999999999999999999
Q ss_pred ccc-chhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc-
Q 002401 193 LLD-SNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR- 268 (927)
Q Consensus 193 y~~-GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~- 268 (927)
|+. ++|.+.+... ....+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++.....
T Consensus 74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCccceecCCC
Confidence 998 5777666432 224589999999999999999999999999999999999994 568899999999864322
Q ss_pred --cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 269 --TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 269 --~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
......+++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 201 (280)
T cd05608 151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARG 201 (280)
T ss_pred CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 2233578899999999999999999999999999999999999997644
No 104
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.5e-39 Score=359.48 Aligned_cols=246 Identities=24% Similarity=0.399 Sum_probs=201.6
Q ss_pred EEeccCCceeEEEeecc---CCCeEEEEEEEeCCh-----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 115 DLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQP-----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~---~tg~~VAIKiik~~~-----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++||+|+||.||+|++. .+++.||||+++... .....+.+|+.+|+.+ .||||++++++|..++.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-------~hp~iv~~~~~~~~~~~ 74 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-------KHPFIVDLIYAFQTGGK 74 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-------CCCchhceeeEEecCCe
Confidence 68999999999999863 578899999998532 2234567799999988 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+||||||+. ++|.+.+... ..+.+..++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||++..
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~ 149 (323)
T cd05584 75 LYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKE 149 (323)
T ss_pred EEEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCee
Confidence 999999998 5888877654 358899999999999999999999999999999999999 4678999999999864
Q ss_pred c---cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 E---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~---~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
. .......++++.|+|||++.+..++.++|||||||+||||++|+.||...+....+..+.....
T Consensus 150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~------------ 217 (323)
T cd05584 150 SIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL------------ 217 (323)
T ss_pred cccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC------------
Confidence 2 1222345789999999999988899999999999999999999999987765544443322000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
+.. ..+
T Consensus 218 ---------------------------------------------------------------~~~-----------~~~ 223 (323)
T cd05584 218 ---------------------------------------------------------------NLP-----------PYL 223 (323)
T ss_pred ---------------------------------------------------------------CCC-----------CCC
Confidence 000 012
Q ss_pred HHHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF 458 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~ 458 (927)
++.+.+||++||+.||++|+ +++++++||||....+
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 34688999999999999999 8999999999987544
No 105
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.4e-39 Score=358.12 Aligned_cols=252 Identities=25% Similarity=0.414 Sum_probs=207.2
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+|++.+.||+|+||.||+|+++.+++.||||++++.. ...+.+..|+.++..+. +|++|+++++++...+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~~i~~~~~~~~~~~ 74 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD------KPPFLTQLHSCFQTVD 74 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc------CCCchhheeeEEecCC
Confidence 4778899999999999999999999999999998532 23345667888877764 3678999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+||||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 75 ~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~Dfg~~~ 149 (323)
T cd05615 75 RLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIADFGMCK 149 (323)
T ss_pred EEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEecccccc
Confidence 9999999997 5888877654 3699999999999999999999999999999999999994 66889999999986
Q ss_pred ccc---ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~---~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+.+... .
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-~--------- 219 (323)
T cd05615 150 EHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-S--------- 219 (323)
T ss_pred ccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-C---------
Confidence 432 222345689999999999998999999999999999999999999988776555554432100 0
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
+| ..
T Consensus 220 ---------------------------------------------------------------~p-------------~~ 223 (323)
T cd05615 220 ---------------------------------------------------------------YP-------------KS 223 (323)
T ss_pred ---------------------------------------------------------------CC-------------cc
Confidence 00 01
Q ss_pred hHHHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF 458 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~ 458 (927)
++..+.+||.+||..||.+|++ .+++++||||....+
T Consensus 224 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 224 LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence 2346789999999999999997 589999999998654
No 106
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.4e-39 Score=355.39 Aligned_cols=206 Identities=23% Similarity=0.365 Sum_probs=173.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++++.||+|+||+||++++..+++.||||++.+. ....+.+.+|+.+++.+ +|+||++++++|...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~ 73 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-------DRRWITNLHYAFQDE 73 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-------CCCCCCceEEEEecC
Confidence 4799999999999999999999999999999999742 22334566788888776 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+++||||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~ 149 (331)
T cd05597 74 NNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSC 149 (331)
T ss_pred CeEEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCCEEEEECCce
Confidence 99999999996 68888886543 4699999999999999999999999999999999999994 6788999999998
Q ss_pred cccccc----ceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 264 CTEDRT----VYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 264 ~~~~~~----~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
...... ....++|+.|+|||++.. ..++.++|||||||++|||++|+.||.+.+..+....+
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i 220 (331)
T cd05597 150 LRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (331)
T ss_pred eecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 643221 122468999999999973 35788999999999999999999999877665554443
No 107
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-40 Score=360.14 Aligned_cols=249 Identities=28% Similarity=0.463 Sum_probs=217.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
+.+|++.+.||+|.||+|-+|.+...++.||||.|+++ +...-.+.+||+||..| +||||+.+|++|+.
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-------NHPhII~IyEVFEN 124 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-------NHPHIIQIYEVFEN 124 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-------CCCceeehhhhhcC
Confidence 36999999999999999999999999999999999864 34455678999999999 58999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+.++|||||.. |.|+|++.... .|++.+++.|++||+.|+.|||.+++||||||.+|||+ +.++.+||+|||+
T Consensus 125 kdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGL 199 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGL 199 (668)
T ss_pred CceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccch
Confidence 999999999997 79999998764 69999999999999999999999999999999999999 5789999999999
Q ss_pred cccc--cccceeeccCCCCCCcchhcCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHH
Q 002401 263 ACTE--DRTVYSYIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 263 A~~~--~~~~~~~~gT~~Y~APEvl~~~~ys-~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
+... .....++||++-|.+||++.+.+|. +.+|.|||||+||.|+.|..||.|.+...++.+|....-..|
T Consensus 200 SNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP------ 273 (668)
T KOG0611|consen 200 SNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP------ 273 (668)
T ss_pred hhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC------
Confidence 9543 3445678999999999999999986 789999999999999999999999888777776654211000
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
T Consensus 274 -------------------------------------------------------------------------------- 273 (668)
T KOG0611|consen 274 -------------------------------------------------------------------------------- 273 (668)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
.....+.-||+.||.+||++|.|+++|..|-|++=
T Consensus 274 -~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 274 -ETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred -CCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 01125678999999999999999999999999863
No 108
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.2e-38 Score=344.33 Aligned_cols=280 Identities=31% Similarity=0.528 Sum_probs=215.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.++||+|++|.||+|+++.+++.||||.+.... .....+.+|+++++.+ .|+||+++++++...+.
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~ 77 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-------KHANIVTLHDIIHTKKT 77 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-------CCcceeeEEEEEecCCe
Confidence 78999999999999999999999999999999987532 1223466899999998 48999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
.|+||||+.++|.+++.... ..+++..++.++.||++||.|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 78 ~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 78 LTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLARAK 153 (291)
T ss_pred EEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECcccccccc
Confidence 99999999999998887654 3689999999999999999999999999999999999994 6688999999998643
Q ss_pred ccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCChHHHHHh
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGAS-EFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s-~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... .....++..|+|||++.+. .++.++|||||||++|+|++|+.||.... ..+.+..+.+.++ .+....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 232 (291)
T cd07844 154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLG-TPTEETWPGV 232 (291)
T ss_pred CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcC-CCChhhhhhh
Confidence 221 1223457889999998764 68999999999999999999999997765 5666777777777 3433333322
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.....+..... ..+....+...+.. + .
T Consensus 233 ~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~------~---------~ 259 (291)
T cd07844 233 SSNPEFKPYSF--------------------------------------PFYPPRPLINHAPR------L---------D 259 (291)
T ss_pred hhccccccccc--------------------------------------cccCChhHHHhCcC------C---------C
Confidence 21111110000 00000111111100 0 0
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
....+.+||.+||..||++|||+.|+|+||||
T Consensus 260 ~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 260 RIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11467899999999999999999999999998
No 109
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.8e-38 Score=343.37 Aligned_cols=280 Identities=29% Similarity=0.472 Sum_probs=215.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++++.||+|+||.||+|.+..+++.||||+++... .....+.+|+.+++.+ +|+||+++++++...+.
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~ni~~~~~~~~~~~~ 77 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-------KHANIVLLHDIIHTKET 77 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-------CCCCEeEEEEEEecCCe
Confidence 68999999999999999999999999999999997542 2233567899999988 58999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
.|+||||+.++|.+.+.... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||++...
T Consensus 78 ~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 78 LTFVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLARAK 153 (291)
T ss_pred EEEEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEecccccccc
Confidence 99999999999888776543 4588899999999999999999999999999999999994 6688999999998643
Q ss_pred cc---cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCChHHHHHh
Q 002401 267 DR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGAS-EFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 267 ~~---~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s-~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.. ......++..|+|||++.+. .++.++|||||||++|||++|..||.... ..+.+.++...++ .|.+.+....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 232 (291)
T cd07870 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLG-VPTEDTWPGV 232 (291)
T ss_pred CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcC-CCChhhhhhh
Confidence 22 22334568899999998764 58899999999999999999999997654 3466666777777 4444433322
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.....+...... . .....+..+.... .
T Consensus 233 ~~~~~~~~~~~~-------------------------------~-------~~~~~~~~~~~~~---------------~ 259 (291)
T cd07870 233 SKLPNYKPEWFL-------------------------------P-------CKPQQLRVVWKRL---------------S 259 (291)
T ss_pred hhcccccchhcc-------------------------------c-------cCCcchhhhcccc---------------C
Confidence 222111111100 0 0000011111000 1
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
.+..+.+||.+||+.||++|||++|+|.||||
T Consensus 260 ~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 260 RPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred CChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 13578899999999999999999999999998
No 110
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.6e-38 Score=344.19 Aligned_cols=282 Identities=30% Similarity=0.513 Sum_probs=221.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.+.||+|.+|.||++++..+++.||||+++... .....+.+|+++++.+ .|+||+++++++....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~ 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-------QHGNIVRLQDVVHSEK 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-------cCCCEeeEEEEEecCC
Confidence 58999999999999999999999999999999986432 2335677899999998 4899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+|+||||++++|.+.+.......+++..++.++.||+.||+|||+++|+|+||||+||+++ .....+||+|||++..
T Consensus 75 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~--~~~~~~kl~dfg~~~~ 152 (294)
T PLN00009 75 RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARA 152 (294)
T ss_pred eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE--CCCCEEEEcccccccc
Confidence 99999999999998888765544578999999999999999999999999999999999996 3456799999999964
Q ss_pred cccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... .....++..|+|||++.+. .++.++|||||||++|+|++|++||......+.+.++...++ .+.+.++...
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 231 (294)
T PLN00009 153 FGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILG-TPNEETWPGV 231 (294)
T ss_pred cCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCChhhcccc
Confidence 3321 2234567889999998764 688999999999999999999999998888888888887777 5544443321
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.....+..... -+....+... ...
T Consensus 232 ~~~~~~~~~~~---------------------------------------~~~~~~~~~~-----------------~~~ 255 (294)
T PLN00009 232 TSLPDYKSAFP---------------------------------------KWPPKDLATV-----------------VPT 255 (294)
T ss_pred ccchhhhhhcc---------------------------------------cCCCCCHHHh-----------------CcC
Confidence 11111100000 0000001110 112
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+++.+++||.+||..||++||+++|+|+||||.+.
T Consensus 256 ~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 256 LEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred CChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 34678999999999999999999999999999874
No 111
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.5e-39 Score=357.70 Aligned_cols=199 Identities=23% Similarity=0.433 Sum_probs=165.4
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHH-HHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSI-LTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~i-L~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
++||+|+||+||+|++..+++.||||++.+.. .....+..|..+ ++.+ .|+||+++++++...+.+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-------~hp~iv~~~~~~~~~~~~~l 73 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-------KHPFLVGLHYSFQTTEKLYF 73 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-------CCCCCccEEEEEecCCEEEE
Confidence 36999999999999999999999999997532 222334444443 3333 69999999999999999999
Q ss_pred EEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc--
Q 002401 190 CFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE-- 266 (927)
Q Consensus 190 VmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~-- 266 (927)
||||+. ++|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 74 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~DfG~~~~~~~ 148 (325)
T cd05604 74 VLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTDFGLCKEGIA 148 (325)
T ss_pred EEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEeecCCcccCCC
Confidence 999998 4777776543 4699999999999999999999999999999999999994 6789999999998642
Q ss_pred -cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 267 -DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 267 -~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
.......+++..|+|||++.+..++.++|||||||++|||++|..||...+..+.+..+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~ 208 (325)
T cd05604 149 QSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI 208 (325)
T ss_pred CCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH
Confidence 22234457899999999999999999999999999999999999999877655544433
No 112
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.8e-39 Score=354.98 Aligned_cols=199 Identities=30% Similarity=0.465 Sum_probs=174.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.++||+|+||.||++.+..+++.||+|+++.. ......+.+|+++|+.+ +|+||++++++|...++
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~ 77 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-------NSPYIVGFYGAFYSDGE 77 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-------CCCcccceeEEEEECCE
Confidence 7999999999999999999999999999999998753 34456788999999998 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC-CeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~-gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
+||||||+. ++|.+++... ..+++..++.++.||+.||.|||+. +|+|+||||+|||++ .++.+||+|||++.
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~ 152 (333)
T cd06650 78 ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSG 152 (333)
T ss_pred EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcch
Confidence 999999997 5898888764 3589999999999999999999975 799999999999994 56789999999986
Q ss_pred cccc-cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002401 265 TEDR-TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEF 319 (927)
Q Consensus 265 ~~~~-~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~ 319 (927)
.... ......++..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 153 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred hhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 5432 223457899999999999889999999999999999999999999766543
No 113
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.1e-39 Score=363.27 Aligned_cols=205 Identities=23% Similarity=0.418 Sum_probs=175.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||+|++..+++.||+|++.+.. .....+.+|+.+++.+ .||||+++++++...
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-------~hp~iv~~~~~~~~~ 115 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-------NSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEcC
Confidence 79999999999999999999999999999999997422 2234466788888877 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+. ++|.+++... .+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a 189 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTC 189 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCce
Confidence 99999999997 5888887653 489999999999999999999999999999999999994 6789999999999
Q ss_pred ccccc----cceeeccCCCCCCcchhcCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 002401 264 CTEDR----TVYSYIQSRYYRSPEVLLGYQ----YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 264 ~~~~~----~~~~~~gT~~Y~APEvl~~~~----ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~ 326 (927)
..... .....+||+.|+|||++.... ++.++||||||||||||++|+.||.+.+......+|.
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 260 (371)
T cd05622 190 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 260 (371)
T ss_pred eEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 75432 123457899999999997643 7899999999999999999999998877655555443
No 114
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.7e-38 Score=338.15 Aligned_cols=279 Identities=33% Similarity=0.570 Sum_probs=214.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.++||+|+||.||+|++..+++.||+|++.... ...+.+.+|+++++.+ .|+||+++++++....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~~~ 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-------KHPNLVNLIEVFRRKR 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-------CCCCEeeeeeEEeeCC
Confidence 47999999999999999999999999999999987432 2334567899999988 4899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+++||||+++++++.+.... ..+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.+||+|||++..
T Consensus 74 ~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~ 149 (286)
T cd07847 74 KLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFARI 149 (286)
T ss_pred EEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECcccccee
Confidence 999999999976666554432 3599999999999999999999999999999999999994 568899999999965
Q ss_pred cccc---ceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... .....++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+...++...+... . .
T Consensus 150 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 227 (286)
T cd07847 150 LTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQ-Q-I 227 (286)
T ss_pred cCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHh-h-h
Confidence 4332 223457888999999876 46889999999999999999999999988888877777776662222100 0 0
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.....+++... .+.. .....++..+ ..
T Consensus 228 ~~~~~~~~~~~--------------------------------~~~~----~~~~~~~~~~-----------------~~ 254 (286)
T cd07847 228 FSTNQFFKGLS--------------------------------IPEP----ETREPLESKF-----------------PN 254 (286)
T ss_pred ccccccccccc--------------------------------CCCc----ccccCHHHHh-----------------cc
Confidence 00000000000 0000 0000111111 12
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
++..+.+||.+||..||++|||+.|+|.||||
T Consensus 255 ~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 255 ISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 35688999999999999999999999999998
No 115
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3e-38 Score=339.00 Aligned_cols=277 Identities=30% Similarity=0.549 Sum_probs=218.9
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+|++.++||.|++|.||+|++..+++.||||+++... .....+.+|+.+++.+ .|+||+++++++...+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~~ 73 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-------KHENIVRLHDVIHTENKL 73 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-------cCCCEeeeeeeEeeCCcE
Confidence 5899999999999999999999999999999997542 2345677899999998 489999999999999999
Q ss_pred EEEEecccchhHHHHHhhc-cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDSNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~-~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+|||||+.++|.+++.... ...+++..++.++.||++||+|||+++|+|+||||+||+++ .++.+||+|||++...
T Consensus 74 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l~d~g~~~~~ 150 (284)
T cd07836 74 MLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKLADFGLARAF 150 (284)
T ss_pred EEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEEeecchhhhh
Confidence 9999999999988876543 24589999999999999999999999999999999999994 6688999999998643
Q ss_pred ccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
... .....++..|++||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+.++.+... .|....++...
T Consensus 151 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 229 (284)
T cd07836 151 GIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMG-TPTESTWPGIS 229 (284)
T ss_pred cCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC-CCChhhHHHHh
Confidence 321 2234567889999998764 578999999999999999999999999888888888887766 44444333222
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
....+..... ......+..+. ...
T Consensus 230 ~~~~~~~~~~---------------------------------------~~~~~~~~~~~-----------------~~~ 253 (284)
T cd07836 230 QLPEYKPTFP---------------------------------------RYPPQDLQQLF-----------------PHA 253 (284)
T ss_pred cCchhccccc---------------------------------------CCChHHHHHHh-----------------hhc
Confidence 1111100000 00000011111 123
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+..+++||.+||+.||++|||+.|+|+||||
T Consensus 254 ~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 254 DPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 4678999999999999999999999999998
No 116
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.3e-39 Score=372.22 Aligned_cols=190 Identities=26% Similarity=0.421 Sum_probs=167.0
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
...|.+.++||+|+||.||+|++..+++.||||.... ....+|+++|++| +|+|||++++++...+..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L-------~HpnIv~l~~~~~~~~~~ 235 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRL-------SHPAVLALLDVRVVGGLT 235 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHC-------CCCCCCcEEEEEEECCEE
Confidence 3589999999999999999999999999999997542 3456899999998 589999999999999999
Q ss_pred EEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|||||++.++|.+++.... ..+++..++.|+.||+.||+|||++|||||||||+||||+ ..+.+||+|||+++...
T Consensus 236 ~lv~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 236 CLVLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAACFAR 311 (461)
T ss_pred EEEEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCceecc
Confidence 9999999999999887643 4699999999999999999999999999999999999994 66889999999996533
Q ss_pred cc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002401 268 RT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313 (927)
Q Consensus 268 ~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF 313 (927)
.. ....+||..|+|||++.+..++.++||||||||||||++|..++
T Consensus 312 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 312 GSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 21 12346899999999999999999999999999999999987544
No 117
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.7e-38 Score=346.11 Aligned_cols=288 Identities=29% Similarity=0.514 Sum_probs=214.9
Q ss_pred ceEEEEEeccCCceeEEEeeccC--CCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAE--MNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~--tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
+|++.++||+|+||.||+|++.. +++.||||+++.. ....+...+|+.+++.+ +|+||+++++++..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~ 73 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-------KHENVVSLVEVFLE 73 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-------CCCCccceEEEEeC
Confidence 58899999999999999999988 8999999999863 23345677899999988 58999999999998
Q ss_pred c--ceeEEEEecccchhHHHHHhhcc---CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEee-cCCCCeEEE
Q 002401 184 Q--RHLCICFELLDSNLYELIKINHF---RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT-SVKPAEIKI 257 (927)
Q Consensus 184 ~--~~l~LVmEy~~GsL~dlL~~~~~---~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~-~~~~g~IKL 257 (927)
. ..+||||||++++|.+++..... ..+++..++.++.||+.||+|||+++|+||||||+|||++. +...+.+||
T Consensus 74 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 74 HADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred CCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEE
Confidence 8 88999999999988887764432 25899999999999999999999999999999999999953 122789999
Q ss_pred eecCCccccccc------ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCH---------HHH
Q 002401 258 IDFGSACTEDRT------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASE---------FDL 321 (927)
Q Consensus 258 ~DFGlA~~~~~~------~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~---------~d~ 321 (927)
+|||++...... ....+++..|+|||++.+. .++.++|||||||+||+|++|++||.+... .+.
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 154 GDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred CCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 999998754322 1234668889999998775 689999999999999999999999976543 235
Q ss_pred HHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHH
Q 002401 322 LRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEI 401 (927)
Q Consensus 322 l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~i 401 (927)
+..+++.++ .+....+........+.+... . .....+....+...
T Consensus 234 ~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-----------------------------~-----~~~~~~~~~~~~~~ 278 (316)
T cd07842 234 LERIFEVLG-TPTEKDWPDIKKMPEYDTLMK-----------------------------D-----FKTKTYPSNSLAKW 278 (316)
T ss_pred HHHHHHHhC-CCchhHHHHHhhcccchhhhh-----------------------------h-----ccCCCCCCccHHHH
Confidence 566666666 333333222211111100000 0 00000000111111
Q ss_pred HhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 402 VTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 402 l~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+. .....+..+.+||.+||.+||++|||+.|+++||||
T Consensus 279 ~~--------------~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 279 ME--------------KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HH--------------hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 10 001345688999999999999999999999999998
No 118
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=7.7e-39 Score=347.08 Aligned_cols=197 Identities=27% Similarity=0.427 Sum_probs=170.7
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.|++.++||+|+||.||++.+..+++.||||++.... .....+.+|+.+++.+ +|++|+.+++.+...+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-------~~~~i~~~~~~~~~~~ 73 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-------NSRFVVSLAYAYETKD 73 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-------CCCCeeeeeEEEecCC
Confidence 3778899999999999999999999999999987532 2234567799999888 5889999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|+||||+. ++|.+++.......+++..++.++.||+.||.|||+++|+||||||+||+++ ..+.++|+|||++.
T Consensus 74 ~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~ 150 (285)
T cd05630 74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAV 150 (285)
T ss_pred EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeecccee
Confidence 9999999997 5788887655545699999999999999999999999999999999999994 66889999999986
Q ss_pred cccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 265 TEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 265 ~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
.... ......++..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 151 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~ 204 (285)
T cd05630 151 HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 204 (285)
T ss_pred ecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 5332 223347899999999999989999999999999999999999999754
No 119
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.8e-39 Score=355.82 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=197.1
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||+|+||+||+|++..+++.||||++.+.. ........|..++..+. ..+||||++++++|.....+|||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~----~~~~p~i~~~~~~~~~~~~~~lv~e 76 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL----LDESPFIVGLKFSFQTDSDLYLVTD 76 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc----cCCCCcCcceEEEEecCCeEEEEEc
Confidence 799999999999999999999999997532 12233445666665542 1259999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc---c
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED---R 268 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~---~ 268 (927)
|+. ++|.+.+... ..+++..++.++.||++||+|||+++|+||||||+|||++ .++.+||+|||++.... .
T Consensus 77 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~~~~~~~~ 151 (330)
T cd05586 77 YMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLSKANLTDNK 151 (330)
T ss_pred CCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcCcCCCCCCC
Confidence 997 5888777654 4699999999999999999999999999999999999994 66889999999986422 2
Q ss_pred cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchh
Q 002401 269 TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKF 347 (927)
Q Consensus 269 ~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~ 347 (927)
.....+||..|+|||++.+. .++.++|||||||+||+|++|+.||.+.+..+.+..+.....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~----------------- 214 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV----------------- 214 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC-----------------
Confidence 23346789999999999765 589999999999999999999999987665544433321000
Q ss_pred hhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHH
Q 002401 348 FKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALV 427 (927)
Q Consensus 348 f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~ 427 (927)
. +| . ..++..+.
T Consensus 215 --------------------------------------------~------------~~--~----------~~~~~~~~ 226 (330)
T cd05586 215 --------------------------------------------R------------FP--K----------NVLSDEGR 226 (330)
T ss_pred --------------------------------------------C------------CC--C----------ccCCHHHH
Confidence 0 00 0 01234678
Q ss_pred HHHHhccccCcCCCC----CHHHHHhCCCcCCCC
Q 002401 428 DFLKGLVEFDPAKRW----SPFQASRHPFVTGEP 457 (927)
Q Consensus 428 DLI~kML~~DP~kRp----TA~EaLqHPwf~~~~ 457 (927)
+||++||..||++|+ +++|+++||||....
T Consensus 227 ~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 227 QFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred HHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 999999999999998 799999999998754
No 120
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3e-38 Score=338.21 Aligned_cols=275 Identities=34% Similarity=0.579 Sum_probs=214.8
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--ce
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ--RH 186 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~--~~ 186 (927)
|+++++||+|+||.||++++..+++.||||+++... .......+|+.+++++. +|+||+++++++.+. +.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~------~h~~i~~~~~~~~~~~~~~ 74 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS------PHPNILRLIEVLFDRKTGR 74 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC------CCCCccceEEEEecCCCCc
Confidence 678999999999999999999999999999987532 22233456888887773 489999999999987 89
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
+++||||+.++|++.+.... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ . +.+||+|||++...
T Consensus 75 ~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 75 LALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGI 149 (282)
T ss_pred EEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEeccccccc
Confidence 99999999999998887643 4689999999999999999999999999999999999995 4 89999999999654
Q ss_pred cc--cceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 267 DR--TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 267 ~~--~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
.. ......++..|+|||++.. ..++.++|||||||++|||++|.+||.+.+..+.+..+.+.++ .++..+......
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 228 (282)
T cd07831 150 YSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLG-TPDAEVLKKFRK 228 (282)
T ss_pred ccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcC-CCCHHHHHhhcc
Confidence 32 2233467889999998754 4578899999999999999999999999998898888888888 444443221100
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
.. . ..+.. +. .....+..+. ..++
T Consensus 229 ~~-----~----------------~~~~~-------------~~-----~~~~~~~~~~-----------------~~~~ 252 (282)
T cd07831 229 SR-----H----------------MNYNF-------------PS-----KKGTGLRKLL-----------------PNAS 252 (282)
T ss_pred cc-----c----------------ccccC-------------cc-----cccccHHHHc-----------------cccc
Confidence 00 0 00000 00 0000111111 1235
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
..+++||.+||..||++|||++|+|+||||
T Consensus 253 ~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 253 AEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred HHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 689999999999999999999999999998
No 121
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=347.73 Aligned_cols=261 Identities=26% Similarity=0.407 Sum_probs=215.5
Q ss_pred CceEEE-EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee----
Q 002401 109 RRYIVK-DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---- 183 (927)
Q Consensus 109 ~rY~i~-~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~---- 183 (927)
++|+|. ++||-|-.|.|..|.++.|++.+|+|++... ..+.+|+++.-... .|+|||.++++|+.
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s------~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMAS------GHPHIVSIIDVYENSYQG 130 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhc------CCCceEEeehhhhhhccC
Confidence 567665 4799999999999999999999999999754 45667888766653 69999999999874
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+.+.||||.|+ |.|+..+.......++|.++..|++||+.|+.|||+.+|.||||||||+|++....+..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 467999999998 5899999888777899999999999999999999999999999999999999888889999999999
Q ss_pred ccccc--ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 263 ACTED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 263 A~~~~--~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
|+... ....+.|-|++|.|||++-..+|+..+|+||+|||||-||+|.+||....-. ..+.-|..+
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~------------aispgMk~r 278 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL------------AISPGMKRR 278 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc------------cCChhHHhH
Confidence 98655 4566778899999999999999999999999999999999999999754321 111111110
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
. ..+ .| -|.+ .++.
T Consensus 279 I----------------~~g--------qy---------------------~FP~---------------------pEWs 292 (400)
T KOG0604|consen 279 I----------------RTG--------QY---------------------EFPE---------------------PEWS 292 (400)
T ss_pred h----------------hcc--------Cc---------------------cCCC---------------------hhHh
Confidence 0 000 01 0111 2355
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
+++++++|||++||..+|.+|+|++|+++|||+++..
T Consensus 293 ~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 293 CVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred HHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 6788999999999999999999999999999999864
No 122
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.7e-39 Score=357.69 Aligned_cols=246 Identities=26% Similarity=0.431 Sum_probs=202.4
Q ss_pred EEeccCCceeEEEeec---cCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 115 DLLGHGTFGQVAKCWD---AEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d---~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
+.||+|+||.||++++ ..+++.||||+++... .......+|+++|+++ .|+||++++++|...+.+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~~~ 74 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-------NHPFIVKLHYAFQTEGKLY 74 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-------CCCCcccEEEEEEcCCEEE
Confidence 5799999999999876 4678999999998532 2234566788888888 5899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|||||+. ++|.+.+... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++....
T Consensus 75 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 75 LILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESI 149 (318)
T ss_pred EEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeeccCCcccC
Confidence 9999997 6888887654 3589999999999999999999999999999999999994 66889999999986543
Q ss_pred c---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhc
Q 002401 268 R---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNT 344 (927)
Q Consensus 268 ~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~ 344 (927)
. .....+++..|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..+.+...
T Consensus 150 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~-------------- 215 (318)
T cd05582 150 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-------------- 215 (318)
T ss_pred CCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC--------------
Confidence 2 23345789999999999988899999999999999999999999987766555444322100
Q ss_pred chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHH
Q 002401 345 SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRL 424 (927)
Q Consensus 345 ~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~ 424 (927)
.+| ..++.
T Consensus 216 -----------------------------------------------------------~~p-------------~~~~~ 223 (318)
T cd05582 216 -----------------------------------------------------------GMP-------------QFLSP 223 (318)
T ss_pred -----------------------------------------------------------CCC-------------CCCCH
Confidence 000 01234
Q ss_pred HHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCC
Q 002401 425 ALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF 458 (927)
Q Consensus 425 ~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~ 458 (927)
.+.+||++||+.||++|+| ++++++||||....+
T Consensus 224 ~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 224 EAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred HHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 6789999999999999999 788999999987643
No 123
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.3e-39 Score=356.55 Aligned_cols=189 Identities=23% Similarity=0.422 Sum_probs=163.8
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
+.||+|+||.||+|++..+++.||||++++. ......+.+|+.++..+. +|+||+++++++...+.+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~------~hp~iv~~~~~~~~~~~~~lv 74 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS------NHPFLVGLHSCFQTESRLFFV 74 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC------CCCcCCceeeEEEeCCEEEEE
Confidence 4699999999999999999999999999853 233445667888877663 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+.+... ..+++..++.++.||+.||+|||+++|+||||||+|||+ +.++.+||+|||++...
T Consensus 75 ~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~ 149 (329)
T cd05618 75 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRP 149 (329)
T ss_pred EeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCC
Confidence 99998 5777766544 469999999999999999999999999999999999999 46789999999998642
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
.......+||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 150 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 222334578999999999999999999999999999999999999995
No 124
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.1e-38 Score=350.81 Aligned_cols=283 Identities=32% Similarity=0.550 Sum_probs=220.0
Q ss_pred CCceEE-EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhH---------------HHHHHHHHHHHHHhhhcCCCCC
Q 002401 108 QRRYIV-KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY---------------QQALVEVSILTTLNKKYDREDK 171 (927)
Q Consensus 108 ~~rY~i-~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~---------------~~~~~Ei~iL~~L~~~~~~~~H 171 (927)
.++|.. .+.||.|+||+||+|++..+++.||||+++...... ..+.+|+++++.+ .|
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h 79 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-------KH 79 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-------CC
Confidence 367765 577999999999999999999999999997532211 2467899999988 48
Q ss_pred CceeEEEEEEeecceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC
Q 002401 172 HHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK 251 (927)
Q Consensus 172 pnIVrl~~~f~~~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~ 251 (927)
+||+++++++...+..|+||||+.++|.+++... ..+++..+..++.||+.||+|||+++|+|+||||+||+++ .
T Consensus 80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~ 154 (335)
T PTZ00024 80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---S 154 (335)
T ss_pred cceeeeeEEEecCCcEEEEEeccccCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---C
Confidence 9999999999999999999999999999988654 3589999999999999999999999999999999999994 6
Q ss_pred CCeEEEeecCCccccc-----------------ccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCC
Q 002401 252 PAEIKIIDFGSACTED-----------------RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLF 313 (927)
Q Consensus 252 ~g~IKL~DFGlA~~~~-----------------~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF 313 (927)
++.+||+|||++.... .......++..|+|||++.+. .++.++|||||||++|||++|.+||
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 234 (335)
T PTZ00024 155 KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLF 234 (335)
T ss_pred CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 6889999999986433 111223457789999999765 4789999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccc
Q 002401 314 PGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYF 393 (927)
Q Consensus 314 ~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f 393 (927)
.+.+..+.+..+.+.++ .|....+........+.... ..
T Consensus 235 ~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~----------------------------------------~~ 273 (335)
T PTZ00024 235 PGENEIDQLGRIFELLG-TPNEDNWPQAKKLPLYTEFT----------------------------------------PR 273 (335)
T ss_pred CCCCHHHHHHHHHHHhC-CCchhhCcchhhcccccccC----------------------------------------cC
Confidence 99999888888888887 44433222111110000000 00
Q ss_pred cccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCCC
Q 002401 394 HHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTC 460 (927)
Q Consensus 394 ~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~~ 460 (927)
....+..+. ...+..+++||.+||..||++|||++|+|.||||+..+...
T Consensus 274 ~~~~~~~~~-----------------~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~ 323 (335)
T PTZ00024 274 KPKDLKTIF-----------------PNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPC 323 (335)
T ss_pred CcccHHHhC-----------------cCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCC
Confidence 000111111 12345788999999999999999999999999999876543
No 125
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3e-38 Score=342.78 Aligned_cols=280 Identities=29% Similarity=0.464 Sum_probs=213.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.++||+|+||.||+|++..+++.||||++.... .....+.+|+++++++ .|+||+++++++...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~ 84 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL-------KHENVVNLIEICRTKA 84 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-------CCCCccceEEEEeccc
Confidence 68999999999999999999999999999999986432 2234556799999988 4899999999987654
Q ss_pred --------eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEE
Q 002401 186 --------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257 (927)
Q Consensus 186 --------~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL 257 (927)
..++||||+.++|.+++.... ..+++.+++.++.||++||+|||+++|+|+||||+||+++ ..+.+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl 160 (310)
T cd07865 85 TPYNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKL 160 (310)
T ss_pred ccccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCcEEE
Confidence 459999999999988876543 3589999999999999999999999999999999999994 6689999
Q ss_pred eecCCccccccc-------ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q 002401 258 IDFGSACTEDRT-------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329 (927)
Q Consensus 258 ~DFGlA~~~~~~-------~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~l 329 (927)
+|||++...... .....++..|+|||++.+. .++.++|||||||++|||++|++||.+.+....+..+.+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999998643221 1233567889999998765 47899999999999999999999999988888888888877
Q ss_pred CCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCC
Q 002401 330 GAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRK 409 (927)
Q Consensus 330 G~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~ 409 (927)
+..+ ..+.+..... ..++... .+.... ..+...+
T Consensus 241 ~~~~-~~~~~~~~~~-~~~~~~~--------------------------------~~~~~~-----~~~~~~l------- 274 (310)
T cd07865 241 GSIT-PEVWPGVDKL-ELFKKME--------------------------------LPQGQK-----RKVKERL------- 274 (310)
T ss_pred CCCC-hhhcccccch-hhhhhcc--------------------------------CCCccc-----hhhHHhc-------
Confidence 7333 3332211100 0000000 000000 0000000
Q ss_pred CCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 410 NLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 410 ~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
.....+..++|||.+||..||++|||++|+|+||||
T Consensus 275 --------~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 275 --------KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred --------ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 000123467899999999999999999999999998
No 126
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.8e-38 Score=350.62 Aligned_cols=206 Identities=22% Similarity=0.349 Sum_probs=173.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||.||+++++.+++.||+|++.+.. .....+.+|+.++..+ +|++|+++++++...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~ 73 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-------DNQWITTLHYAFQDE 73 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-------CCCCEeeEEEEEecC
Confidence 47999999999999999999999999999999997422 2223456677777665 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+. |+|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~kL~DfG~a 149 (332)
T cd05623 74 NNLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSC 149 (332)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEeecchh
Confidence 99999999997 68988887643 4689999999999999999999999999999999999994 6788999999998
Q ss_pred cccccc----ceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 264 CTEDRT----VYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 264 ~~~~~~----~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
...... ....+||+.|+|||++.. ..++.++|||||||+||||++|+.||...+..+.+.++
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i 220 (332)
T cd05623 150 LKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (332)
T ss_pred eecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 643211 123478999999999863 36889999999999999999999999887765555544
No 127
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.4e-38 Score=351.36 Aligned_cols=206 Identities=22% Similarity=0.348 Sum_probs=173.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.++||+|+||.||++++..+++.||||++++.. .....+.+|+.++..+ .|++|+++++++...
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~l~~~~~~~ 73 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-------DCQWITTLHYAFQDE 73 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEcC
Confidence 47999999999999999999999999999999997532 2233456677777666 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a 149 (331)
T cd05624 74 NYLYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSC 149 (331)
T ss_pred CEEEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccce
Confidence 99999999997 68888887643 4689999999999999999999999999999999999994 6688999999998
Q ss_pred cccccc----ceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 264 CTEDRT----VYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 264 ~~~~~~----~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
...... ....+|++.|+|||++.+ ..++.++|||||||+||||++|+.||...+..+.+.++
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i 220 (331)
T cd05624 150 LKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 220 (331)
T ss_pred eeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHH
Confidence 654322 123468999999999976 46889999999999999999999999877665544443
No 128
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.2e-38 Score=341.83 Aligned_cols=191 Identities=28% Similarity=0.427 Sum_probs=164.2
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||+|+||.||+++++.+++.||+|++..+. .....+..|+++++++ +|+||+++++++....++|+|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-------~hp~i~~~~~~~~~~~~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-------NSPFIVNLAYAFESKTHLCLVMS 73 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-------CCCcEEEEEEEEecCCeEEEEEe
Confidence 799999999999999999999999997432 1223455689999888 58999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccccc--
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT-- 269 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~-- 269 (927)
|+. ++|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++......
T Consensus 74 ~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~~~~~~~ 150 (277)
T cd05607 74 LMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKT 150 (277)
T ss_pred cCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeeeecCCCce
Confidence 997 5787777665545689999999999999999999999999999999999994 6688999999998654322
Q ss_pred ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 270 VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 270 ~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
.....++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~ 198 (277)
T cd05607 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198 (277)
T ss_pred eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc
Confidence 233468899999999998899999999999999999999999997543
No 129
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.6e-38 Score=341.31 Aligned_cols=280 Identities=33% Similarity=0.527 Sum_probs=220.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~- 184 (927)
++|++.+.||.|.||.||+|.+..+++.||||.++... .....+.+|+.+++++ .|+||+++++++...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~ni~~~~~~~~~~~ 77 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-------QHPNIVTVKEVVVGSN 77 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-------CCCCEEEEEEEEEecC
Confidence 68999999999999999999999999999999997532 2234567899999988 489999999999877
Q ss_pred -ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 -RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 -~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+||||||+.++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ ..+.+||+|||++
T Consensus 78 ~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~ 153 (293)
T cd07843 78 LDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLA 153 (293)
T ss_pred CCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCce
Confidence 8999999999999988887654 3689999999999999999999999999999999999994 6689999999998
Q ss_pred cccccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHH
Q 002401 264 CTEDRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 264 ~~~~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
...... .....++..|+|||++.+. .++.++|||||||++|+|++|.+||......+.+.++...++ .|....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~ 232 (293)
T cd07843 154 REYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLG-TPTEKIWP 232 (293)
T ss_pred eeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCchHHHH
Confidence 654332 2234568889999998765 468999999999999999999999999998888999888888 55544443
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
........... .+.......+...++.
T Consensus 233 ~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~------------ 259 (293)
T cd07843 233 GFSELPGAKKK-----------------------------------------TFTKYPYNQLRKKFPA------------ 259 (293)
T ss_pred Hhhccchhccc-----------------------------------------ccccccchhhhccccc------------
Confidence 22211000000 0000000111111110
Q ss_pred hhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
..+++.+.+||++||..||++|||++|+|+||||
T Consensus 260 ~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 260 LSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 0034578999999999999999999999999998
No 130
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.1e-38 Score=338.26 Aligned_cols=276 Identities=32% Similarity=0.572 Sum_probs=218.3
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
|++.++||.|.+|.||+|.+..+++.||||++.... .....+.+|+++++.+ +|+||+++++++...+..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-------~~~~iv~~~~~~~~~~~~ 73 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-------NHPNIVRLLDVVHSENKL 73 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-------CCCCccCHhheeccCCeE
Confidence 678899999999999999999999999999997542 2335677899999988 489999999999999999
Q ss_pred EEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|+||||++++|.+++.......+++..++.++.||++||+|||+++++|+||+|+||+++ .++.+||+|||++....
T Consensus 74 ~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~ 150 (283)
T cd07835 74 YLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFG 150 (283)
T ss_pred EEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccC
Confidence 999999998999888765544689999999999999999999999999999999999995 57899999999986543
Q ss_pred cc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 268 RT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 268 ~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
.. .....++..|+|||++.+. .++.++|||||||++|+|++|++||...+..+.+.++.+..+ .|.+..+.....
T Consensus 151 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 229 (283)
T cd07835 151 VPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLG-TPDEDVWPGVTS 229 (283)
T ss_pred CCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCChHHhhhhhh
Confidence 22 1223557889999988765 578999999999999999999999999888888888887776 555444332211
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
...+...... +....+... ...++
T Consensus 230 ~~~~~~~~~~---------------------------------------~~~~~~~~~-----------------~~~~~ 253 (283)
T cd07835 230 LPDYKPTFPK---------------------------------------WARQDLSKV-----------------VPNLD 253 (283)
T ss_pred chhhhhhccc---------------------------------------ccccchhhh-----------------cCCCC
Confidence 1111110000 000001111 11234
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
..+.+||.+||+.||++|||++|+|+||||
T Consensus 254 ~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 254 EDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 578899999999999999999999999998
No 131
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.9e-39 Score=353.70 Aligned_cols=246 Identities=23% Similarity=0.420 Sum_probs=197.6
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHH-HHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSI-LTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~----~~~~~~~Ei~i-L~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
+.||+|+||+||+|++..+++.||||++.+... ....+..|..+ ++.+ .|+||+++++++...+.+|+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-------~h~~Iv~~~~~~~~~~~~~l 73 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-------KHPFLVGLHFSFQTADKLYF 73 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-------CCCCCCceeEEEEcCCeEEE
Confidence 369999999999999999999999999985321 12223333332 3333 69999999999999999999
Q ss_pred EEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc--
Q 002401 190 CFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE-- 266 (927)
Q Consensus 190 VmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~-- 266 (927)
||||+.+ +|.+++... ..+.+..++.++.||++||+|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 74 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~ 148 (325)
T cd05602 74 VLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIE 148 (325)
T ss_pred EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCccccc
Confidence 9999985 787777654 3588999999999999999999999999999999999994 6789999999998642
Q ss_pred -cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcc
Q 002401 267 -DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTS 345 (927)
Q Consensus 267 -~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~ 345 (927)
.......+|++.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+.....
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~--------------- 213 (325)
T cd05602 149 HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--------------- 213 (325)
T ss_pred CCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc---------------
Confidence 2223445789999999999999999999999999999999999999988776655444432100
Q ss_pred hhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHH
Q 002401 346 KFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLA 425 (927)
Q Consensus 346 ~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~ 425 (927)
.. ...++..
T Consensus 214 ------------------------------------------------------------~~-----------~~~~~~~ 222 (325)
T cd05602 214 ------------------------------------------------------------QL-----------KPNITNS 222 (325)
T ss_pred ------------------------------------------------------------CC-----------CCCCCHH
Confidence 00 0012347
Q ss_pred HHHHHHhccccCcCCCCCHH----HHHhCCCcCCCCC
Q 002401 426 LVDFLKGLVEFDPAKRWSPF----QASRHPFVTGEPF 458 (927)
Q Consensus 426 l~DLI~kML~~DP~kRpTA~----EaLqHPwf~~~~~ 458 (927)
+.+||++||+.||.+|+++. ++++|+||....+
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~ 259 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW 259 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence 88999999999999999876 8999999986543
No 132
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.9e-38 Score=351.59 Aligned_cols=190 Identities=23% Similarity=0.409 Sum_probs=165.6
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
++||+|+||+||+|++..+++.||||++++.. ...+.+.+|+.++.++. .|++|+++++++...+.+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~------~~~~i~~~~~~~~~~~~~~lv 74 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS------SNPFLVGLHSCFQTTSRLFLV 74 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc------CCCCEeeEEEEEEeCCEEEEE
Confidence 36999999999999999999999999998642 23445677888888774 489999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--- 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~--- 266 (927)
|||+. ++|.+++... +.+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 75 IEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGP 149 (327)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccceeccCC
Confidence 99997 5787777654 3699999999999999999999999999999999999994 6688999999998642
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
.......+|++.|+|||++.+..++.++||||||||||||++|+.||..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 150 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 2333456789999999999999999999999999999999999999954
No 133
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.6e-38 Score=341.47 Aligned_cols=258 Identities=26% Similarity=0.388 Sum_probs=209.1
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.|++.++||+|+||+||++.+..+++.||+|++.... .....+.+|+++|+.+ .|++|+++++++..++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-------~~~~i~~~~~~~~~~~ 73 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-------NSQFVVNLAYAYETKD 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-------CCcCceeEEEEEecCC
Confidence 3778899999999999999999999999999997542 2234567899999988 4889999999999999
Q ss_pred eeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|+||||+.+ +|.+.+.......+++..+..++.||+.||.|||+++|+||||||+||+++ ..+.+||+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~ 150 (285)
T cd05632 74 ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLAV 150 (285)
T ss_pred EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcce
Confidence 99999999984 777777654445699999999999999999999999999999999999994 56789999999986
Q ss_pred cccc--cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 265 TEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 265 ~~~~--~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... ......++..|+|||++.+..++.++|||||||++|+|++|..||...........+.........
T Consensus 151 ~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~-------- 222 (285)
T cd05632 151 KIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE-------- 222 (285)
T ss_pred ecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc--------
Confidence 4322 223457899999999999889999999999999999999999999876554443333221110000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
.+ ...+
T Consensus 223 -------------------------------------------------------------~~-------------~~~~ 228 (285)
T cd05632 223 -------------------------------------------------------------VY-------------SAKF 228 (285)
T ss_pred -------------------------------------------------------------cc-------------CccC
Confidence 00 0012
Q ss_pred HHHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPFT 459 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~~ 459 (927)
+..+.+||.+||..||++|+| +.|+++|+||+..++.
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence 346789999999999999999 8999999999987553
No 134
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.5e-38 Score=343.87 Aligned_cols=258 Identities=26% Similarity=0.472 Sum_probs=212.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||+|.+..+++.||||.+.... ...+.+..|+++++.+ +|+||+++++++...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~ 73 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-------DHPFLPTLYASFQTE 73 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-------CCCCchhheeeeecC
Confidence 47999999999999999999999999999999997543 2445677899998888 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+..|+||||+. ++|.+++.......+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.++|+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~ 150 (316)
T cd05574 74 TYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLS 150 (316)
T ss_pred CEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchh
Confidence 99999999997 5898888765556799999999999999999999999999999999999995 5688999999998
Q ss_pred cccccc--------------------------------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCC
Q 002401 264 CTEDRT--------------------------------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLP 311 (927)
Q Consensus 264 ~~~~~~--------------------------------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~ 311 (927)
...... ....+++..|+|||++.+..++.++|||||||++|+|++|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~ 230 (316)
T cd05574 151 KQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTT 230 (316)
T ss_pred hcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCC
Confidence 533211 112357888999999998889999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcc
Q 002401 312 LFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391 (927)
Q Consensus 312 PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~ 391 (927)
||.+.+..+.+..+..... .
T Consensus 231 pf~~~~~~~~~~~~~~~~~----~-------------------------------------------------------- 250 (316)
T cd05574 231 PFKGSNRDETFSNILKKEV----T-------------------------------------------------------- 250 (316)
T ss_pred CCCCCchHHHHHHHhcCCc----c--------------------------------------------------------
Confidence 9987765544433321000 0
Q ss_pred cccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCC----HHHHHhCCCcCCCCCCC
Q 002401 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWS----PFQASRHPFVTGEPFTC 460 (927)
Q Consensus 392 ~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpT----A~EaLqHPwf~~~~~~~ 460 (927)
++ ....++..+.+||++||..||++||| ++|+|+||||++..+..
T Consensus 251 -------------~~-----------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~ 299 (316)
T cd05574 251 -------------FP-----------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWAL 299 (316)
T ss_pred -------------CC-----------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhh
Confidence 00 00013357899999999999999999 99999999999876644
No 135
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.6e-39 Score=352.11 Aligned_cols=197 Identities=24% Similarity=0.450 Sum_probs=163.4
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHH-HHHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVS-ILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~----~~~~~~~Ei~-iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
++||+|+||.||+|++..+++.||||++.+... ....+..|+. +++.+ .|+||++++++|...+.+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-------~h~~iv~~~~~~~~~~~~~l 73 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-------KHPFLVGLHYSFQTAEKLYF 73 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-------CCCCccceeeEEEcCCEEEE
Confidence 369999999999999999999999999975321 2223344443 34444 69999999999999999999
Q ss_pred EEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc--
Q 002401 190 CFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE-- 266 (927)
Q Consensus 190 VmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~-- 266 (927)
||||+++ +|.+.+... ..+++..++.++.||++||+|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 74 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~ 148 (321)
T cd05603 74 VLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGVE 148 (321)
T ss_pred EEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEccCCCCccCCC
Confidence 9999984 777666543 4689999999999999999999999999999999999994 6789999999998642
Q ss_pred -cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002401 267 -DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLR 323 (927)
Q Consensus 267 -~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~ 323 (927)
.......++++.|+|||++.+..++.++|||||||++|||++|..||.+.+..+...
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 206 (321)
T cd05603 149 PEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYD 206 (321)
T ss_pred CCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence 222334578999999999998899999999999999999999999998776544433
No 136
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7.6e-38 Score=347.13 Aligned_cols=282 Identities=32% Similarity=0.574 Sum_probs=217.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC--ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN--QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ- 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~--~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~- 184 (927)
.++|++.++||+|+||.||+|++..+++.||||+++. .......+.+|+.+++.+ .|+||+++++++...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-------KHENIIGILDIIRPPS 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC-------CCCCcCchhheeeccc
Confidence 3789999999999999999999999999999999864 233455677899999998 489999999987654
Q ss_pred ----ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 185 ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 185 ----~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
.++|+|+||+.++|.+++... .+++..++.++.||++||+|||+++|+||||||+|||++ ..+.+||+||
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~---~~~~~kl~df 150 (336)
T cd07849 77 FESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TNCDLKICDF 150 (336)
T ss_pred ccccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEECcc
Confidence 358999999999988877543 599999999999999999999999999999999999994 6788999999
Q ss_pred CCccccccc------ceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 261 GSACTEDRT------VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 261 GlA~~~~~~------~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
|++...... .....++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+...++..+
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~ 230 (336)
T cd07849 151 GLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPS 230 (336)
T ss_pred cceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 998643221 123467889999998765 4689999999999999999999999999888888888888888333
Q ss_pred ChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCCh
Q 002401 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSM 413 (927)
Q Consensus 334 P~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~ 413 (927)
++. +....... ..++ +...+.......
T Consensus 231 ~~~-~~~~~~~~-----------------------------~~~~-----------------------~~~~~~~~~~~~ 257 (336)
T cd07849 231 QED-LNCIISLR-----------------------------ARNY-----------------------IKSLPFKPKVPW 257 (336)
T ss_pred HHH-HHHhhchh-----------------------------hhhH-----------------------HhhcCcCCcccH
Confidence 322 22110000 0000 000000000000
Q ss_pred hhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 414 EDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 414 e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.. .....+.++.+||.+||+.||++|||+.|+|+||||....
T Consensus 258 ~~--~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 258 NK--LFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HH--HhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00 0112346789999999999999999999999999998653
No 137
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.6e-38 Score=340.79 Aligned_cols=253 Identities=25% Similarity=0.477 Sum_probs=212.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||++++..+++.||||+++... ...+.+.+|+++++.+ +|+||+++++++...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~ 73 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-------RHPFLVNLYGSFQDD 73 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-------CCCCccceeeEEEcC
Confidence 47999999999999999999999999999999997532 3345677899999888 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+|+||||+. ++|.+++... ..+++..++.++.||++||+|||+++|+|+||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~ 148 (290)
T cd05580 74 SNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKITDFGFA 148 (290)
T ss_pred CeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEeeCCCc
Confidence 99999999995 7898888765 4699999999999999999999999999999999999994 6688999999999
Q ss_pred ccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 264 CTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 264 ~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
...........++..|+|||.+.+..++.++|||||||++|+|++|..||...+..+....+.. + .++
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~-~~~--------- 216 (290)
T cd05580 149 KRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--G-KVR--------- 216 (290)
T ss_pred cccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--C-Ccc---------
Confidence 7665555556788999999999888899999999999999999999999977664433333321 0 000
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
+| ...+
T Consensus 217 -------------------------------------------------------------~~-------------~~~~ 222 (290)
T cd05580 217 -------------------------------------------------------------FP-------------SFFS 222 (290)
T ss_pred -------------------------------------------------------------CC-------------ccCC
Confidence 00 0123
Q ss_pred HHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCCC
Q 002401 424 LALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPFT 459 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~~ 459 (927)
..+.+||++||..||++|+ +++|+++||||....+.
T Consensus 223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 263 (290)
T cd05580 223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWI 263 (290)
T ss_pred HHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHH
Confidence 4688999999999999999 99999999999876543
No 138
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.1e-38 Score=336.85 Aligned_cols=280 Identities=33% Similarity=0.601 Sum_probs=219.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.++||+|+||.||+|.+..+++.||||+++.. ....+.+.+|+++++.+ .|+||+++++++...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~ 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-------RHENIVNLKEAFRRKG 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-------CCCCeeehhheEEECC
Confidence 3799999999999999999999999999999998753 23446788899999998 4899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+++||||+++++.+.+.... ..+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.+||+|||++..
T Consensus 74 ~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~~ 149 (288)
T cd07833 74 RLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFARA 149 (288)
T ss_pred EEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeecccc
Confidence 999999999987776655443 4589999999999999999999999999999999999994 678999999999865
Q ss_pred cccc----ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 266 EDRT----VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 266 ~~~~----~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
.... .....++..|+|||++... .++.++|||||||++|+|++|++||.+....+.+..+...++..++.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 228 (288)
T cd07833 150 LRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL- 228 (288)
T ss_pred cCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhh-
Confidence 4332 2345678889999999888 889999999999999999999999998888888888888777444422111
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
..... .+.... + + .......+...+ ..
T Consensus 229 ~~~~~-~~~~~~-----------------~---------------~-------~~~~~~~~~~~~-------------~~ 255 (288)
T cd07833 229 FSSNP-RFAGVA-----------------F---------------P-------EPSQPESLERRY-------------PG 255 (288)
T ss_pred cccCc-cccccc-----------------c---------------C-------CCCCcHHHHHhc-------------CC
Confidence 00000 000000 0 0 000000000000 11
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
.++.++++||++||..||++|||++++++||||
T Consensus 256 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 256 KVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 234678999999999999999999999999998
No 139
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=366.56 Aligned_cols=250 Identities=26% Similarity=0.444 Sum_probs=211.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
..|+.+++||+|.||.||+|.+..+++.||||++..+ +...+.+..|+.+|..+ +++||.++|+.|..+..
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~-------~~~~it~yygsyl~g~~ 85 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-------DSPNITEYYGSYLKGTK 85 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc-------CcchHHhhhhheeeccc
Confidence 5788889999999999999999999999999999864 34556788899999999 46899999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
++|+||||. |.+.++++... .+.|..+..++++++.||.|||.++.+|||||+.||||. ..+.+||+|||.+..
T Consensus 86 LwiiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~q 160 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQ 160 (467)
T ss_pred HHHHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeee
Confidence 999999998 57888887654 348999999999999999999999999999999999995 559999999999965
Q ss_pred ccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
... ...+++||++|||||++.+..|+.|+||||||++++||++|.+|+.......++..|-+. .|
T Consensus 161 l~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~---~P--------- 228 (467)
T KOG0201|consen 161 LTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKS---AP--------- 228 (467)
T ss_pred eechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCC---CC---------
Confidence 432 236789999999999999889999999999999999999999999765442211111100 00
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
| . .+...
T Consensus 229 ---------------------------------------------------------------P---~-------L~~~~ 235 (467)
T KOG0201|consen 229 ---------------------------------------------------------------P---R-------LDGDF 235 (467)
T ss_pred ---------------------------------------------------------------C---c-------ccccc
Confidence 0 0 11145
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
++.|++||..||+.||+.||||.++|+|+|++.
T Consensus 236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 236 SPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 568999999999999999999999999999997
No 140
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.7e-38 Score=336.26 Aligned_cols=200 Identities=28% Similarity=0.487 Sum_probs=171.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec----
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~---- 184 (927)
+.|++.+.||+|+||.||+|++..+++.||||++.........+..|+.+++++. +|+||++++++|...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~------~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS------HHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc------CCCCeeeEeeEEeecCCCC
Confidence 6899999999999999999999999999999999876555567788999998874 489999999998753
Q ss_pred --ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 185 --RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 185 --~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
..+|+||||+. ++|.+++.......+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~---~~~~~~l~Dfg 156 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFG 156 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC---CCCCEEEccCC
Confidence 46899999998 5888888765545689999999999999999999999999999999999994 66789999999
Q ss_pred Ccccccc---cceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 262 SACTEDR---TVYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 262 lA~~~~~---~~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
++..... ......++..|+|||++.. ..++.++|||||||++|||++|..||....
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~ 220 (272)
T cd06637 157 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 220 (272)
T ss_pred CceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 9865432 2234568889999999863 358889999999999999999999996543
No 141
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.9e-38 Score=347.38 Aligned_cols=198 Identities=18% Similarity=0.260 Sum_probs=166.1
Q ss_pred EEEEeccC--CceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 113 VKDLLGHG--TFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 113 i~~~LG~G--sfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
++++||+| +|++||+++++.+++.||||+++.. ....+.+.+|+++++.+ +||||++++++|..++.+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~hpniv~~~~~~~~~~~~ 74 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-------NHPNIVPYRATFIADNEL 74 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-------CCCCeeeEEEEEEECCEE
Confidence 56789999 7889999999999999999999754 23345667799999888 589999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+. ++|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++ .++.++|+||+.+...
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~~~~ 151 (327)
T cd08227 75 WVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSM 151 (327)
T ss_pred EEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchhhcc
Confidence 99999998 5888888765545699999999999999999999999999999999999995 5678999999865322
Q ss_pred cc----------cceeeccCCCCCCcchhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 267 DR----------TVYSYIQSRYYRSPEVLLG--YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 267 ~~----------~~~~~~gT~~Y~APEvl~~--~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
.. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 217 (327)
T cd08227 152 INHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 217 (327)
T ss_pred ccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH
Confidence 11 1112345677999999976 368999999999999999999999998665443
No 142
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-38 Score=372.14 Aligned_cols=286 Identities=22% Similarity=0.275 Sum_probs=203.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCC-eEEE------------------EEEEeCChhhHHHHHHHHHHHHHHhhhcCC
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMN-SFVA------------------VKIIKNQPAYYQQALVEVSILTTLNKKYDR 168 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg-~~VA------------------IKiik~~~~~~~~~~~Ei~iL~~L~~~~~~ 168 (927)
.++|+++++||+|+||+||+|..+... +.++ +|.++........+.+|+.+|+.+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l------ 220 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL------ 220 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC------
Confidence 478999999999999999998654321 1122 222233333455678899999998
Q ss_pred CCCCceeEEEEEEeecceeEEEEecccchhHHHHHhhcc---CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEE
Q 002401 169 EDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHF---RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENIL 245 (927)
Q Consensus 169 ~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL~dlL~~~~~---~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNIL 245 (927)
+|+||+++++++...+..|+|+|++.++|++++..... ....+..++.|+.||+.||+|||++|||||||||+|||
T Consensus 221 -~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NIL 299 (501)
T PHA03210 221 -NHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIF 299 (501)
T ss_pred -CCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 58999999999999999999999999999888765431 22446778899999999999999999999999999999
Q ss_pred EeecCCCCeEEEeecCCccccccc----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCC-CCC--CCH
Q 002401 246 LCTSVKPAEIKIIDFGSACTEDRT----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPL-FPG--ASE 318 (927)
Q Consensus 246 L~~~~~~g~IKL~DFGlA~~~~~~----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~P-F~g--~s~ 318 (927)
++ .++.+||+|||++...... ....+|+..|+|||++.+..++.++||||||||||||++|..+ |.. ...
T Consensus 300 l~---~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 300 LN---CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred EC---CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 94 6688999999999754322 2235789999999999999999999999999999999998754 432 234
Q ss_pred HHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccch
Q 002401 319 FDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHL 398 (927)
Q Consensus 319 ~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L 398 (927)
...+.+++..++ .+.+.+.....+ +++. +....+ . .....+
T Consensus 377 ~~~~~~~~~~~~-~~~~~~p~~~~~---~~~~----------------------i~~~~~----------~---~~~~~~ 417 (501)
T PHA03210 377 GKQLLKIIDSLS-VCDEEFPDPPCK---LFDY----------------------IDSAEI----------D---HAGHSV 417 (501)
T ss_pred HHHHHHHHHhcc-cChhhcCCcHHH---HHHH----------------------hhhhhc----------c---cCccch
Confidence 455555555444 221111100000 0000 000000 0 000111
Q ss_pred HHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 399 EEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 399 ~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
..++.. ..++..+.+||.+||.+||++|||+.|+|+||||....
T Consensus 418 ~~~~~~---------------~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~ 461 (501)
T PHA03210 418 PPLIRN---------------LGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE 461 (501)
T ss_pred hhHHHh---------------cCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence 122211 12345788999999999999999999999999998753
No 143
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=6.5e-38 Score=349.22 Aligned_cols=282 Identities=30% Similarity=0.607 Sum_probs=224.6
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.+.||+|+||.||+|++..+++.||||++... ......+.+|+.+++.+ .|+||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~ 86 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-------DHENVIGLLDVFTPA 86 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-------cCCCHHHHHHHhhcc
Confidence 47899999999999999999999999999999998742 23345677899999888 489999999988766
Q ss_pred ce------eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 185 RH------LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 185 ~~------l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
+. +|+|+||++++|.+++... .+++..++.++.||++||+|||+.||+|+||||+||+++ .++.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~ 160 (343)
T cd07851 87 SSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKIL 160 (343)
T ss_pred ccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEc
Confidence 54 8999999999999888753 599999999999999999999999999999999999994 56889999
Q ss_pred ecCCcccccccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 259 DFGSACTEDRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 259 DFGlA~~~~~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
|||++...........++..|+|||++.+. .++.++|||||||++|+|++|+.||.+....+.+..+.+.++ .+++.+
T Consensus 161 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~-~~~~~~ 239 (343)
T cd07851 161 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVG-TPDEEL 239 (343)
T ss_pred cccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC-CCCHHH
Confidence 999997765555566788899999998764 688999999999999999999999999888888888888887 455444
Q ss_pred HHHhhhc--chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 338 LKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 338 l~~~~~~--~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
+...... ..+..... ....+.+..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~------------- 267 (343)
T cd07851 240 LQKISSESARNYIQSLP---------------------------------------QMPKKDFKEVF------------- 267 (343)
T ss_pred HhhccchhHHHHHHhcc---------------------------------------ccCCCCHHHHh-------------
Confidence 4322110 00000000 00000111111
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
...+..+.|||++||..||++|||+.|||+||||.....+
T Consensus 268 ----~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 268 ----SGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred ----ccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 1234689999999999999999999999999999976433
No 144
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.3e-37 Score=345.41 Aligned_cols=280 Identities=29% Similarity=0.552 Sum_probs=220.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|.+.+.||+|+||.||++.+..+++.||||+++... ...+.+.+|+.+++.+ .|+||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-------~h~~iv~~~~~~~~~ 88 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-------KHENVIGLLDVFTPA 88 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-------CCCcccceeeeeeec
Confidence 379999999999999999999999999999999997532 2345677899999988 589999999988643
Q ss_pred ------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 185 ------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 185 ------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
...|+|+++++++|.+++... .+++..++.++.||++||+|||+++|+||||||+||+++ .++.+||+
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~ 162 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKIL 162 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEe
Confidence 357999999988888877543 489999999999999999999999999999999999994 66889999
Q ss_pred ecCCcccccccceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 259 DFGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 259 DFGlA~~~~~~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
|||++...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+....+..+.+..+ .++..+
T Consensus 163 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~ 241 (345)
T cd07877 163 DFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG-TPGAEL 241 (345)
T ss_pred cccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCCHHH
Confidence 99999776555555678899999999877 4688999999999999999999999998888888888888877 444444
Q ss_pred HHHhhhc--chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 338 LKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 338 l~~~~~~--~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
....... ..++.... .. ....+.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~----------------------------------~~-----~~~~~~~~~------------- 269 (345)
T cd07877 242 LKKISSESARNYIQSLT----------------------------------QM-----PKMNFANVF------------- 269 (345)
T ss_pred HhhcccHhHHHHHHHhc----------------------------------cc-----CCcchhhhc-------------
Confidence 3321100 00000000 00 000000000
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
...+..+++||.+||+.||++|+|+.|+|+||||.+..
T Consensus 270 ----~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 270 ----IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred ----CCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence 11345789999999999999999999999999999754
No 145
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-38 Score=354.90 Aligned_cols=205 Identities=31% Similarity=0.426 Sum_probs=175.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeE-EEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSF-VAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~-VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
....+.+.||.|+||+||++.. .++. ||||++.... ...+.+.+|+.+|.+| .|||||+|++++...
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l-------~HpNIV~f~G~~~~~ 111 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRL-------RHPNIVQFYGACTSP 111 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhC-------CCCCeeeEEEEEcCC
Confidence 3555667799999999999954 4555 9999998542 2256899999999998 589999999999988
Q ss_pred c-eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCC-eeeccCCCCCEEEeecCCCC-eEEEeec
Q 002401 185 R-HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG-IIHCDLKPENILLCTSVKPA-EIKIIDF 260 (927)
Q Consensus 185 ~-~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~g-IVHrDLKPeNILL~~~~~~g-~IKL~DF 260 (927)
. .++|||||+. |+|.+++.......++...+..|+.||++||.|||+++ |||||||++||||+ ... .+||+||
T Consensus 112 ~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~---~~~~~~KI~DF 188 (362)
T KOG0192|consen 112 PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD---LKGKTLKIADF 188 (362)
T ss_pred CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc---CCCCEEEECCC
Confidence 7 7999999998 68888887754567999999999999999999999999 99999999999994 554 9999999
Q ss_pred CCccccc---ccceeeccCCCCCCcchhc--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 261 GSACTED---RTVYSYIQSRYYRSPEVLL--GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 261 GlA~~~~---~~~~~~~gT~~Y~APEvl~--~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
|+++... .......||..|||||++. ...|+.|+||||||++||||+||+.||.+.........+
T Consensus 189 Glsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v 258 (362)
T KOG0192|consen 189 GLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV 258 (362)
T ss_pred ccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 9997655 3344478999999999999 558999999999999999999999999988774444443
No 146
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=9.8e-38 Score=346.69 Aligned_cols=283 Identities=33% Similarity=0.581 Sum_probs=219.6
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ......+.+|+.+++.+ +|+||+++++++...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~ni~~~~~~~~~~ 76 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-------DHENVIAIKDIMPPP 76 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc-------CCCCccchHHheecc
Confidence 36899999999999999999999999999999998742 23345667899999888 589999999988754
Q ss_pred -----ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 185 -----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 185 -----~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
..+||||||+.++|.+++... ..+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.+||+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~D 151 (337)
T cd07858 77 HREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICD 151 (337)
T ss_pred cccccCcEEEEEeCCCCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECc
Confidence 358999999999999888754 4699999999999999999999999999999999999994 568899999
Q ss_pred cCCccccccc---ceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCCh
Q 002401 260 FGSACTEDRT---VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD 335 (927)
Q Consensus 260 FGlA~~~~~~---~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~ 335 (927)
||++...... .....++..|+|||++.. ..++.++|||||||++|+|++|++||.+.+....+..+.+.++..+++
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 152 FGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231 (337)
T ss_pred CccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 9999754322 234567889999999875 468899999999999999999999999988888888888888833332
Q ss_pred HHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhh
Q 002401 336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED 415 (927)
Q Consensus 336 ~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~ 415 (927)
.+ ...... ...++ +...+........
T Consensus 232 ~~-~~~~~~-----------------------------~~~~~-----------------------~~~~~~~~~~~~~- 257 (337)
T cd07858 232 DL-GFIRNE-----------------------------KARRY-----------------------IRSLPYTPRQSFA- 257 (337)
T ss_pred Hh-hhcCch-----------------------------hhhHH-----------------------HHhcCcccccCHH-
Confidence 22 100000 00000 0000000000000
Q ss_pred hhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 416 i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.....++..+++||++||+.||++|||++|+|+||||....
T Consensus 258 -~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 258 -RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred -HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 01123456889999999999999999999999999998753
No 147
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=8.7e-38 Score=338.54 Aligned_cols=256 Identities=29% Similarity=0.468 Sum_probs=205.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+.|+++++||.|+||.||++++..+++.||+|++... ....+.+.+|+++++.+ .|+||+++++++..++.+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~ 84 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC-------NHPYIVKLLGAFYWDGKL 84 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC-------CCCcEeeeEEEEEeCCeE
Confidence 6899999999999999999999999999999999754 34456678899999888 589999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+.+ +|..++.... ..+++..++.++.||+.+|+|||+++|+||||||+||+++ .++.+||+|||++...
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAKN 160 (292)
T ss_pred EEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccceec
Confidence 999999986 5555554433 4689999999999999999999999999999999999994 5688999999998643
Q ss_pred cc---cceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 267 DR---TVYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 267 ~~---~~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
.. ......++..|+|||++.. ..++.++|||||||++|||++|.+||...+....+.++... .++.
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~--- 234 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPT--- 234 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CCcc---
Confidence 22 2234567889999999853 35788999999999999999999999765543332222110 0000
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
+..
T Consensus 235 -----------------------------------------------------------------------------~~~ 237 (292)
T cd06644 235 -----------------------------------------------------------------------------LSQ 237 (292)
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 000
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
...++.++.+||++||..||++||+++|+|+||||.....
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 277 (292)
T cd06644 238 PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277 (292)
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 0112346889999999999999999999999999986543
No 148
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-40 Score=368.82 Aligned_cols=256 Identities=29% Similarity=0.456 Sum_probs=219.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC-ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN-QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~-~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+.|.|+..||.|+||.||+|.++.++-..|.|+|.. .....+.++.||.||..+ +||+||+|++.|..++.+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C-------dHP~ivkLl~ayy~enkL 104 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC-------DHPVIVKLLSAYYFENKL 104 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC-------CChHHHHHHHHHhccCce
Confidence 678899999999999999999999999999999974 456678899999999998 699999999999999999
Q ss_pred EEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+|+.|||+|+-.|.+...-...|++.+|+.+++|+|.||.|||+++|||||||..|||++ -+|.|+|+|||.+....
T Consensus 105 wiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNK 181 (1187)
T ss_pred EEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccch
Confidence 999999998777766655567899999999999999999999999999999999999996 56899999999985433
Q ss_pred ---ccceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHH
Q 002401 268 ---RTVYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 268 ---~~~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
.....++||++|||||++.. .+|++++||||||++|.||..+.+|-...+...++-+|.+. .||.-
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTL--- 255 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTL--- 255 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---CCCcc---
Confidence 33457899999999999864 47999999999999999999999999877776666655441 22211
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
...
T Consensus 256 -----------------------------------------------------------------------------lqP 258 (1187)
T KOG0579|consen 256 -----------------------------------------------------------------------------LQP 258 (1187)
T ss_pred -----------------------------------------------------------------------------cCc
Confidence 011
Q ss_pred hhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
...+..|.|||++||..||..||++.|+|+||||+..+
T Consensus 259 S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 259 SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred chhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence 23345789999999999999999999999999999655
No 149
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.4e-38 Score=365.00 Aligned_cols=252 Identities=23% Similarity=0.309 Sum_probs=208.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCC-CeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEM-NSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~t-g~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
..|.+.+.||+|+||.||+|.+..+ ++.||+|++... ......+.+|+.+|+.+ +||||++++++|...++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-------~Hpniv~~~~~~~~~~~ 139 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC-------DHFGIVKHFDDFKSDDK 139 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-------CCCCEeEEEEEEEECCE
Confidence 4699999999999999999998877 788999987654 33345667799999888 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 187 LCICFELLD-SNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+||||||+. ++|.+++... ....+++.++..++.||+.||+|||+++||||||||+|||++ ..+.+||+|||++
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgla 216 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGFS 216 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcCc
Confidence 999999997 6888877643 234589999999999999999999999999999999999994 6789999999999
Q ss_pred cccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 264 CTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 264 ~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
+..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+..... +
T Consensus 217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~--~----- 289 (478)
T PTZ00267 217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY--D----- 289 (478)
T ss_pred eecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--C-----
Confidence 754322 2345689999999999998999999999999999999999999987766555444332100 0
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
+..
T Consensus 290 -------------------------------------------------------------------~~~---------- 292 (478)
T PTZ00267 290 -------------------------------------------------------------------PFP---------- 292 (478)
T ss_pred -------------------------------------------------------------------CCC----------
Confidence 000
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
..++..+.+||.+||..||++|||++|+|+|+|++.
T Consensus 293 -~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 293 -CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred -ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 012346889999999999999999999999999964
No 150
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.9e-38 Score=330.85 Aligned_cols=199 Identities=28% Similarity=0.490 Sum_probs=170.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
+.|++.++||+|++|.||+|.+..+++.||||++.... .....+.+|+++++.+ +|+||+++++++.
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~ 74 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-------QHERIVQYYGCLR 74 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-------CCCCeeeeEEEEc
Confidence 46889999999999999999999999999999987432 1234567788888888 5899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
.++.+++||||+. ++|.+++... ..+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.+||+|||
T Consensus 75 ~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg 149 (263)
T cd06625 75 DDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFG 149 (263)
T ss_pred cCCeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecc
Confidence 9999999999997 5788887654 3589999999999999999999999999999999999994 56789999999
Q ss_pred Ccccccccc------eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002401 262 SACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEF 319 (927)
Q Consensus 262 lA~~~~~~~------~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~ 319 (927)
++....... ....++..|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 213 (263)
T cd06625 150 ASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM 213 (263)
T ss_pred cceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH
Confidence 986432211 2345678899999999989999999999999999999999999765443
No 151
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2e-37 Score=332.20 Aligned_cols=213 Identities=36% Similarity=0.594 Sum_probs=183.3
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce-
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH- 186 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~- 186 (927)
|++.+.||+|+||.||++++..+++.||||+++.. ......+.+|+.+++++... .|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~----~h~~i~~~~~~~~~~~~~ 76 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESF----EHPNIVRLLDVCHGPRTD 76 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhcc----CCCCcceEEEEEeeccCC
Confidence 67899999999999999999888999999999743 22234566788888888543 69999999999998776
Q ss_pred ----eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 187 ----LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 187 ----l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
+++||||+.++|.+++.......+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.+||+|||+
T Consensus 77 ~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~ 153 (287)
T cd07838 77 RELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGL 153 (287)
T ss_pred CCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCc
Confidence 9999999999998888765544699999999999999999999999999999999999995 558999999999
Q ss_pred ccccccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 002401 263 ACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330 (927)
Q Consensus 263 A~~~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG 330 (927)
+...... .....++..|+|||++.+..++.++|||||||++|||++|++||.+.+..+.+.++.+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 223 (287)
T cd07838 154 ARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIG 223 (287)
T ss_pred ceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcC
Confidence 8654322 2234568889999999998999999999999999999999999999988888888877655
No 152
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=8.7e-38 Score=331.87 Aligned_cols=203 Identities=28% Similarity=0.470 Sum_probs=172.8
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc--
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR-- 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~-- 185 (927)
.++|++.+.||+|+||.||+|++..+++.|++|++.......+.+.+|+.+++++. .|+||++++++|....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~------~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS------NHPNIATFYGAFIKKNPP 78 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc------CCCChheEEEEEEecCCC
Confidence 37999999999999999999999999999999999876666677889999999884 4899999999997644
Q ss_pred ----eeEEEEecccc-hhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 186 ----HLCICFELLDS-NLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 186 ----~l~LVmEy~~G-sL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
.+||||||+++ +|.+++.... ...+++..++.++.||+.||+|||+++|+|+||+|+||+++ .++.+||+
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~ 155 (275)
T cd06608 79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLV 155 (275)
T ss_pred CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEEC
Confidence 58999999984 7888776543 35689999999999999999999999999999999999994 56889999
Q ss_pred ecCCcccccc---cceeeccCCCCCCcchhcCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002401 259 DFGSACTEDR---TVYSYIQSRYYRSPEVLLGY-----QYTTAIDMWSFGCIVAELFLGLPLFPGASEF 319 (927)
Q Consensus 259 DFGlA~~~~~---~~~~~~gT~~Y~APEvl~~~-----~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~ 319 (927)
|||++..... ......++..|+|||++... .++.++||||||||||+|++|+.||......
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 224 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM 224 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH
Confidence 9999864332 22345678899999998642 4778999999999999999999999755433
No 153
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.2e-37 Score=327.03 Aligned_cols=249 Identities=25% Similarity=0.355 Sum_probs=203.6
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee-cc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-QR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~-~~ 185 (927)
.|++++.||+|++|.||++++..+++.||||++.... ...+.+.+|+++++++ .|+||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-------KHPNIVAYRESWEGEDG 73 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-------CCCCeeeeeeeecCCCC
Confidence 4899999999999999999999999999999997532 3345677888888888 58999999998864 44
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|+||||+. ++|.+.+.......+++.+++.++.||+.||++||++||+|+||||+||+++ .++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~ 150 (257)
T cd08223 74 LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIAR 150 (257)
T ss_pred EEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceE
Confidence 6899999997 5888888775555699999999999999999999999999999999999994 66889999999986
Q ss_pred cccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... ......++..|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+..... ++
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--~~------- 221 (257)
T cd08223 151 VLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--PP------- 221 (257)
T ss_pred EecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CC-------
Confidence 4322 22334678899999999998999999999999999999999999976654443333221000 00
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
. ...
T Consensus 222 ---------------------------------------------------------------~-------------~~~ 225 (257)
T cd08223 222 ---------------------------------------------------------------M-------------PKD 225 (257)
T ss_pred ---------------------------------------------------------------C-------------ccc
Confidence 0 001
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
++.++.+||.+||..||++|||+.|+|+||||
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 226 YSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 23578899999999999999999999999997
No 154
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.8e-38 Score=344.73 Aligned_cols=282 Identities=34% Similarity=0.540 Sum_probs=223.3
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc-
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR- 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~- 185 (927)
+|++.++||.|+||.||+|++..+++.||||++... ....+.+.+|+.+++.+ +|+||+++++++...+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-------RHENIIGLLDILRPPSP 73 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-------CCcchhhhhhhhcccCc
Confidence 689999999999999999999999999999998753 33456788899999988 4899999999998775
Q ss_pred ----eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 186 ----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 186 ----~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
.+|+||||+.++|.+++.... .+++..++.++.||+.||+|||++||+|+||||+|||++ .++.++|+|||
T Consensus 74 ~~~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg 148 (330)
T cd07834 74 EDFNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFG 148 (330)
T ss_pred ccccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccC
Confidence 799999999998988886543 699999999999999999999999999999999999994 56899999999
Q ss_pred Cccccccc------ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCC
Q 002401 262 SACTEDRT------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334 (927)
Q Consensus 262 lA~~~~~~------~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP 334 (927)
++...... .....++..|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+...++ .++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~ 227 (330)
T cd07834 149 LARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLG-TPS 227 (330)
T ss_pred ceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcC-CCC
Confidence 99654322 2345678899999999888 899999999999999999999999999999999999998888 443
Q ss_pred hHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChh
Q 002401 335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME 414 (927)
Q Consensus 335 ~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e 414 (927)
...+..... .. ..++.... .. .....+..+.
T Consensus 228 ~~~~~~~~~-------~~----------------------~~~~~~~~--~~------~~~~~~~~~~------------ 258 (330)
T cd07834 228 EEDLKFITS-------EK----------------------ARNYLKSL--PK------KPKKPLSKLF------------ 258 (330)
T ss_pred hhHhhhccc-------cc----------------------hhhHHhhc--cc------CCcchhHHhc------------
Confidence 332221000 00 00000000 00 0000111111
Q ss_pred hhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 415 DISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 415 ~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
..++..+.+||++||++||++|||++++|+||||.+...
T Consensus 259 -----~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 259 -----PGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred -----ccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 124567899999999999999999999999999987543
No 155
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2e-37 Score=326.65 Aligned_cols=249 Identities=28% Similarity=0.393 Sum_probs=208.0
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|.+.+.||+|+||.||+|.+..+++.|++|.+... ......+.+|+++++.+ .|+||+++++++...+.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~ 73 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-------DSSYIIRYYESFLDKGK 73 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-------CCCCeehheeeeccCCE
Confidence 488999999999999999999999999999998743 34556778899998888 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+||||+. ++|.+++.......+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.+||+|||++..
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~ 150 (256)
T cd08529 74 LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKL 150 (256)
T ss_pred EEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEccccccee
Confidence 999999997 5899988876556799999999999999999999999999999999999995 568899999999865
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....++..|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+.+... ++
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~-------- 220 (256)
T cd08529 151 LSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF--PP-------- 220 (256)
T ss_pred ccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CC--------
Confidence 4322 2234678899999999998999999999999999999999999987765444433322000 00
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
+ ...+
T Consensus 221 --------------------------------------------------------------~-------------~~~~ 225 (256)
T cd08529 221 --------------------------------------------------------------V-------------SQMY 225 (256)
T ss_pred --------------------------------------------------------------C-------------cccc
Confidence 0 0012
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+..+.+||++||+.||++||++.|+++|||+
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 226 SQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 3478899999999999999999999999996
No 156
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7.5e-38 Score=346.86 Aligned_cols=281 Identities=31% Similarity=0.552 Sum_probs=221.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee--
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-- 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~-- 183 (927)
++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+|+.+ .|+||++++++|..
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~ 77 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-------KHDNIIAIRDILRPPG 77 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc-------CCCCccCHHHhccccC
Confidence 78999999999999999999999999999999987532 3345677899999988 48999999998863
Q ss_pred --cceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 184 --QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 184 --~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
...+|+||||+.++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||
T Consensus 78 ~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg 152 (334)
T cd07855 78 ADFKDVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFG 152 (334)
T ss_pred CCCceEEEEEehhhhhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEecccc
Confidence 3478999999999998887654 3599999999999999999999999999999999999994 67899999999
Q ss_pred Cccccccc-------ceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 262 SACTEDRT-------VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 262 lA~~~~~~-------~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
++...... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....+..+...+| .|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g-~~ 231 (334)
T cd07855 153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG-SP 231 (334)
T ss_pred cceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC-CC
Confidence 98643221 123467889999999876 4689999999999999999999999999988888888898888 55
Q ss_pred ChHHHHHhhh--cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCC
Q 002401 334 PDYVLKEAKN--TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL 411 (927)
Q Consensus 334 P~~~l~~~~~--~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~l 411 (927)
+..++..... ...+++... . .....+.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-------------------------------~--------~~~~~~~~~~--------- 263 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLP-------------------------------R--------KQPVPWSKIF--------- 263 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcc-------------------------------c--------CCCCCHHHHc---------
Confidence 5444332110 000000000 0 0000111111
Q ss_pred ChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 412 SMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 412 s~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
...+..+.+||++||+.||++|||++|+|+||||.+.+.
T Consensus 264 --------~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 264 --------PKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred --------ccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 123568999999999999999999999999999987643
No 157
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.3e-37 Score=346.57 Aligned_cols=281 Identities=28% Similarity=0.551 Sum_probs=218.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|.+.+.||+|+||.||+|++..+++.||||+++.. ......+.+|+++++.+ .|+||++++++|....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~niv~~~~~~~~~~ 87 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-------QHENVIGLLDVFTSAV 87 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-------CCCCccchhheecccc
Confidence 6899999999999999999999999999999998753 22345677899999988 5899999999987543
Q ss_pred ------eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 186 ------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 186 ------~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
.+|+|+||+..+|.+++. ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~d 160 (342)
T cd07879 88 SGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILD 160 (342)
T ss_pred cCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEee
Confidence 569999999877766542 3589999999999999999999999999999999999994 678999999
Q ss_pred cCCcccccccceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 260 FGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 260 FGlA~~~~~~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
||++...........++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.+..+....+ .+...+.
T Consensus 161 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~ 239 (342)
T cd07879 161 FGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG-VPGPEFV 239 (342)
T ss_pred CCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCHHHH
Confidence 9999766555455677889999999876 4689999999999999999999999999888888888888877 3333333
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
+....... ..+... .+ .+....+..+.
T Consensus 240 ~~~~~~~~-----------------------------~~~~~~---~~-----~~~~~~~~~~~---------------- 266 (342)
T cd07879 240 QKLEDKAA-----------------------------KSYIKS---LP-----KYPRKDFSTLF---------------- 266 (342)
T ss_pred HHhcccch-----------------------------HHHHhh---cC-----CcccchHHHHh----------------
Confidence 22111000 000000 00 00001111111
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
...+..+++||++||+.||++|||++|||.||||.+..-
T Consensus 267 -~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 267 -PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 123457889999999999999999999999999988653
No 158
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=9.2e-38 Score=335.82 Aligned_cols=200 Identities=27% Similarity=0.491 Sum_probs=172.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee-----
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC----- 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~----- 183 (927)
+.|++.+.||.|+||.||+|++..+++.||+|++.........+..|+.+++++. +|+||++++++|..
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~------~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS------HHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc------CCCcEEEEeeehhcccccC
Confidence 7899999999999999999999999999999999876655567788999988884 48999999999863
Q ss_pred -cceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 184 -QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 184 -~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
...+|+||||+.+ +|.+++.......+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.+||+|||
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg 166 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFG 166 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCc
Confidence 4578999999984 888888776555689999999999999999999999999999999999994 66789999999
Q ss_pred Ccccccc---cceeeccCCCCCCcchhc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 262 SACTEDR---TVYSYIQSRYYRSPEVLL-----GYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 262 lA~~~~~---~~~~~~gT~~Y~APEvl~-----~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
++..... ......++..|+|||++. ...++.++|||||||++|||++|..||....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 167 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred chhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 9865432 223456888999999986 3468889999999999999999999996544
No 159
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.6e-37 Score=344.22 Aligned_cols=281 Identities=30% Similarity=0.512 Sum_probs=211.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
..+|++.+.||.|+||.||+|++..+++.||||++.... ...+.+.+|+++++.+ .|+||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-------~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-------DHDNIVKVYEVLGPSGS 76 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-------CCCcchhhHhhhccccc
Confidence 479999999999999999999999999999999987543 3345678899999988 489999999876654
Q ss_pred ------------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCC
Q 002401 185 ------------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP 252 (927)
Q Consensus 185 ------------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~ 252 (927)
..+|+||||++++|.+++... .+++..++.++.||++||.|||++||+||||||+||+++ ..+
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~ 151 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TED 151 (342)
T ss_pred ccccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCC
Confidence 358999999999888877543 489999999999999999999999999999999999995 345
Q ss_pred CeEEEeecCCccccccc------ceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 253 AEIKIIDFGSACTEDRT------VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 253 g~IKL~DFGlA~~~~~~------~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
..+||+|||++...... .....++..|+|||++.. ..++.++|||||||++|+|++|+.||.+.+..+.+..+
T Consensus 152 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~ 231 (342)
T cd07854 152 LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLI 231 (342)
T ss_pred ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 68999999998643221 112356888999998765 46889999999999999999999999988887777766
Q ss_pred HHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhC
Q 002401 326 IRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNY 405 (927)
Q Consensus 326 ~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~ 405 (927)
........++. .. .+..... ....... ......+..++
T Consensus 232 ~~~~~~~~~~~-~~------~~~~~~~------------------------~~~~~~~--------~~~~~~~~~~~--- 269 (342)
T cd07854 232 LESVPVVREED-RN------ELLNVIP------------------------SFVRNDG--------GEPRRPLRDLL--- 269 (342)
T ss_pred HHhcCCCChHH-hh------hhhhhhh------------------------hhhhhcc--------cccCCCHHHHc---
Confidence 65443111111 00 0000000 0000000 00001111111
Q ss_pred CCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 406 PYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 406 P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
...+.++++||++||..||++|||++|+|+||||+..
T Consensus 270 --------------~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 270 --------------PGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred --------------cCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 1234578999999999999999999999999999854
No 160
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.6e-37 Score=332.31 Aligned_cols=276 Identities=36% Similarity=0.640 Sum_probs=218.6
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
|++.+.||.|++|.||+|++..+++.+|+|+++... .....+.+|+++++.+ .|+||+++++++...+.+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~ 73 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-------NHPNIIKLLDVFRHKGDL 73 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-------cCCCcchHHHhhccCCCE
Confidence 677899999999999999999999999999987542 2356777899999988 489999999999999999
Q ss_pred EEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
++||||++++|.+++.... ..+++..++.++.||++||.|||+++|+|+||||+||+++ .++.+||+|||.+....
T Consensus 74 ~~v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~~~~~ 149 (283)
T cd05118 74 YLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLARSFG 149 (283)
T ss_pred EEEEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeeeEecC
Confidence 9999999999988887754 4699999999999999999999999999999999999994 56889999999986543
Q ss_pred ccc---eeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 268 RTV---YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 268 ~~~---~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
... ....++..|+|||.+.+. .++.++|||||||++|+|++|+.||...+..+.+.++.+.++ .+....+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 228 (283)
T cd05118 150 SPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLG-TPDPEVWPKFTS 228 (283)
T ss_pred CCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC-CCchHhcccchh
Confidence 322 234577889999999877 789999999999999999999999999998888888888777 333222221111
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
...+... .++.......+. .....+
T Consensus 229 ~~~~~~~-----------------------------------------------------~~~~~~~~~~~~--~~~~~~ 253 (283)
T cd05118 229 LARNYKF-----------------------------------------------------SFPKKAGMPLPK--LFPNAS 253 (283)
T ss_pred hhhhhhh-----------------------------------------------------hhccccccCHHH--hhhhhC
Confidence 0000000 000000000000 112345
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
.++++||.+||..||.+||+++|+|+||||
T Consensus 254 ~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 254 PQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred HHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 789999999999999999999999999997
No 161
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.7e-38 Score=353.38 Aligned_cols=256 Identities=27% Similarity=0.450 Sum_probs=202.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEe---CChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik---~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
..|+++++||.|+.+.||++.....+ .||+|.+. .+.....-+.+||..|.+|+ +|.+||+||||-..++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~-iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk------g~~~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQ-IYALKKVVLLEADNQTLDGYRNEIALLNKLK------GHDKIIQLYDYEVTDG 433 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCc-chhhhHHHHhhcCHHHHHHHHHHHHHHHHhc------CCceEEEEeeeeccCc
Confidence 78999999999999999999765544 45666554 24556677899999999996 5789999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+|+|||+-+.+|..+|++.. ..++.-.++.+.+|||.|+.++|.+||||.||||.|+|+ ..|.+||+|||.|..
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl----VkG~LKLIDFGIA~a 508 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL----VKGRLKLIDFGIANA 508 (677)
T ss_pred eEEEEeecccccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE----EeeeEEeeeechhcc
Confidence 999999999999999998775 335545899999999999999999999999999999999 568999999999975
Q ss_pred cccc-----ceeeccCCCCCCcchhcCCC-----------CCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q 002401 266 EDRT-----VYSYIQSRYYRSPEVLLGYQ-----------YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329 (927)
Q Consensus 266 ~~~~-----~~~~~gT~~Y~APEvl~~~~-----------ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~l 329 (927)
.... ....+||+.||+||.+.... .+.++||||||||||+|+.|++||.. ....+.++..+.
T Consensus 509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~--~~n~~aKl~aI~ 586 (677)
T KOG0596|consen 509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ--IINQIAKLHAIT 586 (677)
T ss_pred cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH--HHHHHHHHHhhc
Confidence 4433 23468999999999996432 56789999999999999999999942 222333333322
Q ss_pred CCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCC
Q 002401 330 GAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRK 409 (927)
Q Consensus 330 G~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~ 409 (927)
. |.. +.-| |..+
T Consensus 587 ~---P~~-----------------------------------------------------~Ief------------p~~~ 598 (677)
T KOG0596|consen 587 D---PNH-----------------------------------------------------EIEF------------PDIP 598 (677)
T ss_pred C---CCc-----------------------------------------------------cccc------------cCCC
Confidence 1 100 0000 1000
Q ss_pred CCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 410 NLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 410 ~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
-..+++|+++.||.+||+||||+.|+|+|||++..++
T Consensus 599 ------------~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i 635 (677)
T KOG0596|consen 599 ------------ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPI 635 (677)
T ss_pred ------------CchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccc
Confidence 0124899999999999999999999999999987543
No 162
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=365.00 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=206.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.++||+|+||+||+|++..+++.||||++... ......+.+|+.+|..+ .|+||+++++.+...
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-------~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-------DFFSIVKCHEDFAKK 103 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-------CCCcEEEeecceecc
Confidence 37999999999999999999999999999999999753 33445667788888776 589999999887643
Q ss_pred c--------eeEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC
Q 002401 185 R--------HLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 185 ~--------~l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g 253 (927)
+ .+++||||+. |+|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++ .++
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~ 180 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNG 180 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCC
Confidence 2 4789999998 68988886542 34689999999999999999999999999999999999995 568
Q ss_pred eEEEeecCCcccccc-----cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 002401 254 EIKIIDFGSACTEDR-----TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI 328 (927)
Q Consensus 254 ~IKL~DFGlA~~~~~-----~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~ 328 (927)
.+||+|||+++.... .....+||+.|+|||++.+..++.++||||||||||||++|+.||.+.+..+.+..+...
T Consensus 181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~ 260 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG 260 (496)
T ss_pred CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence 899999999864322 223457899999999999999999999999999999999999999877655544433220
Q ss_pred hCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCC
Q 002401 329 LGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYR 408 (927)
Q Consensus 329 lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~ 408 (927)
.- . +..
T Consensus 261 ~~--~------------------------------------------------------------------------~~~ 266 (496)
T PTZ00283 261 RY--D------------------------------------------------------------------------PLP 266 (496)
T ss_pred CC--C------------------------------------------------------------------------CCC
Confidence 00 0 000
Q ss_pred CCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 409 KNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 409 ~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
..+++++.+||.+||..||++|||+.|+|+|||++.
T Consensus 267 -----------~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 267 -----------PSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred -----------CCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 012357889999999999999999999999999875
No 163
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.1e-37 Score=342.32 Aligned_cols=282 Identities=28% Similarity=0.561 Sum_probs=219.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++++.||+|+||.||++.+..+++.||||+++.. ......+.+|+++|+.+ .|+||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~ 86 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-------KHENVIGLLDVFTPD 86 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-------CCCCccceeeeecCC
Confidence 47899999999999999999999999999999998642 23345677899999998 589999999998765
Q ss_pred c------eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 185 R------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 185 ~------~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
. .+|+||||++++|.+++.. ..+++..++.++.||++||+|||+.||+||||||+||+++ .++.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~ 160 (343)
T cd07880 87 LSLDRFHDFYLVMPFMGTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKIL 160 (343)
T ss_pred ccccccceEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEe
Confidence 3 4699999998888887764 3589999999999999999999999999999999999994 56889999
Q ss_pred ecCCcccccccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 259 DFGSACTEDRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 259 DFGlA~~~~~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
|||++...........++..|+|||++.+. .++.++|||||||++|+|++|..||.+.+....+..+....+ .++..+
T Consensus 161 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~ 239 (343)
T cd07880 161 DFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTG-TPSKEF 239 (343)
T ss_pred ecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCHHH
Confidence 999997665555556778899999998763 688999999999999999999999998888777777777666 333333
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
........ ...+...- + .+....+..+
T Consensus 240 ~~~~~~~~-----------------------------~~~~~~~~---~-----~~~~~~~~~~---------------- 266 (343)
T cd07880 240 VQKLQSED-----------------------------AKNYVKKL---P-----RFRKKDFRSL---------------- 266 (343)
T ss_pred HHhhcchh-----------------------------HHHHHHhc---c-----ccCcchHHHh----------------
Confidence 22111000 00000000 0 0000001111
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
....+..+.+||.+||..||++|||+.|+|+||||+...
T Consensus 267 -~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 267 -LPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred -ccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 122445789999999999999999999999999998764
No 164
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.6e-37 Score=334.50 Aligned_cols=254 Identities=29% Similarity=0.462 Sum_probs=205.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+.|++.+.||+|+||.||++++..++..+|+|.+... ....+.+.+|+++++.+ +|+||++++++|...+..
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-------~h~~ii~~~~~~~~~~~~ 77 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-------DHPNIVKLLDAFYYENNL 77 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-------CCCCeeeEEEEEeeCCEE
Confidence 4578899999999999999999999999999999754 34456778899999988 589999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
++||||+.+ +|..++... ...+++..++.++.||++||+|||+.+|+|+||||+|||++ .++.+||+|||++...
T Consensus 78 ~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 78 WILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEccccccccc
Confidence 999999985 555555443 24699999999999999999999999999999999999994 6688999999998643
Q ss_pred cc---cceeeccCCCCCCcchhc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 267 DR---TVYSYIQSRYYRSPEVLL-----GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 267 ~~---~~~~~~gT~~Y~APEvl~-----~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
.. ......++..|+|||++. +..++.++|||||||++|||++|.+||...+..+.+..+..... +.
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~~--- 227 (282)
T cd06643 154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP---PT--- 227 (282)
T ss_pred cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC---CC---
Confidence 22 123346788999999984 34578899999999999999999999987665544443322110 00
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
. + .
T Consensus 228 -------------------------------------------------~-----------------~-----------~ 230 (282)
T cd06643 228 -------------------------------------------------L-----------------A-----------Q 230 (282)
T ss_pred -------------------------------------------------C-----------------C-----------C
Confidence 0 0 0
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
...++..+.+||++||..||++|||++++|+||||+..
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 231 PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 01123478899999999999999999999999999864
No 165
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-37 Score=339.40 Aligned_cols=255 Identities=22% Similarity=0.395 Sum_probs=207.1
Q ss_pred ccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 106 ~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
....+|++.+.||+|+||.||++++..+++.||||++.... ...+.+.+|+.+++.+ .|+||+++++.|...
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-------~h~~v~~~~~~~~~~ 89 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-------KNPNIVNYLDSYLVG 89 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC-------CCCCEeeEEEEEEeC
Confidence 34479999999999999999999999999999999997542 3345677899999887 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.+.|+||||+. ++|.+++... .+++.++..++.||+.||+|||+.+|+|+||||+|||++ .++.+||+|||++
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~ 163 (296)
T cd06654 90 DELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFC 163 (296)
T ss_pred CEEEEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEECccccc
Confidence 99999999997 5788877543 489999999999999999999999999999999999994 5678999999998
Q ss_pred cccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 264 CTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 264 ~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
...... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||......+.+..+.. .+ .++
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~-~~~------ 235 (296)
T cd06654 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NG-TPE------ 235 (296)
T ss_pred hhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CC-CCC------
Confidence 643221 2234678899999999988899999999999999999999999976654332221110 00 000
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
.+ ...
T Consensus 236 ----------------------------------------------------------------~~-----------~~~ 240 (296)
T cd06654 236 ----------------------------------------------------------------LQ-----------NPE 240 (296)
T ss_pred ----------------------------------------------------------------CC-----------Ccc
Confidence 00 001
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.++..+.+||.+||..||++|||++|+|+||||...
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 123468899999999999999999999999999864
No 166
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-40 Score=340.80 Aligned_cols=289 Identities=27% Similarity=0.452 Sum_probs=228.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~- 184 (927)
..|+-..+||+|.||.||+|+.+.+++.||+|++-- +..+-...++|++||..|+ |+|++.++++|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk-------Henv~nliEic~tk~ 89 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK-------HENVVNLIEICRTKA 89 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc-------chhHHHHHHHHhhcc
Confidence 577788899999999999999999999999987642 3455567889999999994 78999998887643
Q ss_pred -------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEE
Q 002401 185 -------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257 (927)
Q Consensus 185 -------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL 257 (927)
..+|+||.+|+.+|..++.... .+++..+|++++.++++||.|+|...|+|||+|++|+||+ .++.+||
T Consensus 90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt---~dgilkl 165 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT---KDGILKL 165 (376)
T ss_pred CCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc---CCceEEe
Confidence 3599999999999999887653 5699999999999999999999999999999999999994 7799999
Q ss_pred eecCCcccccc-------cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q 002401 258 IDFGSACTEDR-------TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329 (927)
Q Consensus 258 ~DFGlA~~~~~-------~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~l 329 (927)
+|||+++.... .....+.|.+|++||.+.+. .|+++.|||..||||.||+|+.+.|.+.++..++..|...+
T Consensus 166 ADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc 245 (376)
T KOG0669|consen 166 ADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC 245 (376)
T ss_pred eccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence 99999953221 12234569999999999987 79999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCC
Q 002401 330 GAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRK 409 (927)
Q Consensus 330 G~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~ 409 (927)
| ....++|++..+...| ..+. . ++.++..+ +.++..++.| .
T Consensus 246 G-s~tkevWP~~d~lpL~-~sie-------------------------~-------ePl~~~~~--rkv~n~~kp~--~- 286 (376)
T KOG0669|consen 246 G-SITKEVWPNVDNLPLY-QSIE-------------------------L-------EPLPKGQK--RKVKNRLKPY--V- 286 (376)
T ss_pred c-cCCcccCCCcccchHH-Hhcc-------------------------C-------CCCCcchh--hhhhhhcccc--c-
Confidence 9 5555555543322111 1110 0 00111111 1122222211 0
Q ss_pred CCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 410 NLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 410 ~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
-+++++|||.+||.+||.||+++.|||+|.||..++.+
T Consensus 287 ------------kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 287 ------------KDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred ------------CChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 13478899999999999999999999999999988765
No 167
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-39 Score=357.49 Aligned_cols=253 Identities=29% Similarity=0.419 Sum_probs=217.8
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
.++||.|.||+||-++++++|+.||||+|.+. .....+..+|+.||+.+ .||.||.+.-.|+..+.+++|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-------~HPGiV~le~M~ET~ervFVV 641 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-------HHPGIVNLECMFETPERVFVV 641 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-------CCCCeeEEEEeecCCceEEEE
Confidence 46899999999999999999999999999753 23346788999999999 589999999999999999999
Q ss_pred EecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc
Q 002401 191 FELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270 (927)
Q Consensus 191 mEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~ 270 (927)
||-+.|+.+++|...+.++|++...+.++.|||.||.|||.++|||+||||||||+...+.-.++||||||+|+.+.+..
T Consensus 642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 99999999999999988999999999999999999999999999999999999999877778899999999999877553
Q ss_pred --eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhh
Q 002401 271 --YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFF 348 (927)
Q Consensus 271 --~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f 348 (927)
...+||+.|+|||+++.+.|+..-||||+|||+|.-|.|..||..+. |+-.+|....-+.||
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp-------------- 785 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPP-------------- 785 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCC--------------
Confidence 45799999999999999999999999999999999999999996432 222222211000111
Q ss_pred hhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHH
Q 002401 349 KCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVD 428 (927)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~D 428 (927)
. .+.+++..++|
T Consensus 786 -----------------------------------------------~---------------------PW~eis~~Aid 797 (888)
T KOG4236|consen 786 -----------------------------------------------N---------------------PWSEISPEAID 797 (888)
T ss_pred -----------------------------------------------C---------------------chhhcCHHHHH
Confidence 0 12345568999
Q ss_pred HHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 429 FLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 429 LI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
||.++|++.-.||.|.++.|.|||+++..
T Consensus 798 lIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 798 LINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred HHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 99999999999999999999999999854
No 168
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.6e-37 Score=327.48 Aligned_cols=198 Identities=28% Similarity=0.466 Sum_probs=174.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|++.++||+|+||.||++++..+++.||+|+++.... .+.+.+|+++++.+ .|+||+++++++.....+|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l-------~~~~i~~~~~~~~~~~~~~ 74 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC-------DSPYIVKYYGSYFKNTDLW 74 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC-------CCCcEeeeeeeeecCCcEE
Confidence 689999999999999999999998899999999986644 67888999999998 5899999999999999999
Q ss_pred EEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+|+||+.+ +|.+++.... ..+++..++.++.||++||.|||+.+|+|+||+|+||+++ .++.+||+|||++....
T Consensus 75 l~~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~~~~ 150 (256)
T cd06612 75 IVMEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLT 150 (256)
T ss_pred EEEecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccchhcc
Confidence 99999984 7888776543 5689999999999999999999999999999999999994 56789999999987543
Q ss_pred cc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 268 RT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 268 ~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
.. .....++..|+|||++.+..++.++||||||||+|+|++|+.||.....
T Consensus 151 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~ 204 (256)
T cd06612 151 DTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP 204 (256)
T ss_pred cCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch
Confidence 32 2234578889999999988999999999999999999999999976543
No 169
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.2e-37 Score=345.15 Aligned_cols=201 Identities=28% Similarity=0.443 Sum_probs=166.5
Q ss_pred CCceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
.++|++.++||+|+||.||+|.+ ..+++.||||+++.. ......+.+|+.+|+.+. +|+||++++++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~niv~~~~~ 79 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG------NHLNVVNLLGA 79 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc------cCcceeeEEeE
Confidence 37899999999999999999974 344678999999753 233456888999999984 48999999998
Q ss_pred Eeec-ceeEEEEeccc-chhHHHHHhhc----------------------------------------------------
Q 002401 181 FVCQ-RHLCICFELLD-SNLYELIKINH---------------------------------------------------- 206 (927)
Q Consensus 181 f~~~-~~l~LVmEy~~-GsL~dlL~~~~---------------------------------------------------- 206 (927)
|... ..+++||||+. |+|.+++....
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 8764 46899999998 68988886532
Q ss_pred --------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc-----eee
Q 002401 207 --------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV-----YSY 273 (927)
Q Consensus 207 --------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~ 273 (927)
...+++..+..++.||++||+|||+++|+||||||+|||++ .++.+||+|||+++...... ...
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 236 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSA 236 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCC
Confidence 12478889999999999999999999999999999999994 56889999999997532211 122
Q ss_pred ccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002401 274 IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS 317 (927)
Q Consensus 274 ~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s 317 (927)
.++..|+|||++.+..++.++|||||||+||||++ |..||.+..
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~ 281 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ 281 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCC
Confidence 34578999999999899999999999999999997 999997654
No 170
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.6e-37 Score=335.56 Aligned_cols=279 Identities=30% Similarity=0.503 Sum_probs=214.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.++||+|+||.||+|++..+++.||||++.... .....+.+|+++++.+ +|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~ 79 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-------KHPNVVPLIDMAVER 79 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-------CCCCccchhhheecc
Confidence 479999999999999999999999999999999986432 2234567899999988 589999999987543
Q ss_pred --------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEE
Q 002401 185 --------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 185 --------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IK 256 (927)
..+++||||+.++|.+.+.... ..+++..++.++.||++||+|||++||+|+||||+|||+ +.++.+|
T Consensus 80 ~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~ 155 (311)
T cd07866 80 PDKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILK 155 (311)
T ss_pred cccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEE
Confidence 3579999999998888776543 469999999999999999999999999999999999999 4678999
Q ss_pred EeecCCccccccc--------------ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002401 257 IIDFGSACTEDRT--------------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321 (927)
Q Consensus 257 L~DFGlA~~~~~~--------------~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~ 321 (927)
|+|||++...... .....++..|+|||++.+. .++.++||||||||+|||++|++||.+.+..+.
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~ 235 (311)
T cd07866 156 IADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ 235 (311)
T ss_pred ECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999998643221 1123557889999998764 589999999999999999999999999998888
Q ss_pred HHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHH
Q 002401 322 LRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEI 401 (927)
Q Consensus 322 l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~i 401 (927)
...+....+ .++...+.............. .... ...+.+.
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~-~~~~~~~ 276 (311)
T cd07866 236 LHLIFKLCG-TPTEETWPGWRSLPGCEGVHS-------------------------------------FTNY-PRTLEER 276 (311)
T ss_pred HHHHHHHhC-CCChhhchhhhhccccccccc-------------------------------------CCCC-CccHHHH
Confidence 888888877 443333322111110000000 0000 0011111
Q ss_pred HhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 402 VTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 402 l~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
. ..+...+.+||.+||..||++|||+.|+|.||||
T Consensus 277 ~-----------------~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 277 F-----------------GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred c-----------------ccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 0 1123578999999999999999999999999998
No 171
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.7e-37 Score=328.82 Aligned_cols=277 Identities=33% Similarity=0.594 Sum_probs=216.4
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--c
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ--R 185 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~--~ 185 (927)
|++.++||.|+||.||+|++..+++.||+|+++.. ......+.+|+++++.+ .|+||+++++++... +
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~ 73 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-------RHPNIVRLKEIVTSKGKG 73 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-------cCCCeeeheeeEecCCCC
Confidence 67899999999999999999999999999999864 33445677899999998 489999999999988 8
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+++||||++++|.+++.... ..+++..++.++.||++||+|||+.+++|+||||+||+++ +++.+||+|||++..
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~~~ 149 (287)
T cd07840 74 SIYMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKLADFGLARP 149 (287)
T ss_pred cEEEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEEccccceee
Confidence 999999999999988887653 4699999999999999999999999999999999999994 678999999999965
Q ss_pred cccc----ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 266 EDRT----VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 266 ~~~~----~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
.... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||...+..+.+..+.+..+ .++...+..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 228 (287)
T cd07840 150 YTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCG-SPTDENWPG 228 (287)
T ss_pred ccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCchhhccc
Confidence 4332 2234567889999988764 688999999999999999999999999888888888887776 333222221
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
.... .++.... + ...+ ...+.+.+..
T Consensus 229 ~~~~-~~~~~~~---------------------------------~---~~~~-~~~~~~~~~~---------------- 254 (287)
T cd07840 229 VSKL-PWFENLK---------------------------------P---KKPY-KRRLREFFKH---------------- 254 (287)
T ss_pred cccc-hhhhhcc---------------------------------c---cccc-hhHHHHHhcc----------------
Confidence 1110 0000000 0 0000 0011111110
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
..+..+++||++||.+||++|||++++|+||||
T Consensus 255 ~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 255 LIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 124678999999999999999999999999998
No 172
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7.8e-37 Score=335.03 Aligned_cols=198 Identities=31% Similarity=0.491 Sum_probs=173.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.++||+|+||.||++++..+++.||+|+++.+ .....++.+|+++++++ +|+||++++++|..+++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~ 73 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-------NSPYIVGFYGAFYSDGE 73 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEeeCCE
Confidence 3699999999999999999999999999999998754 33456688899999998 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
+||||||+. ++|.+++... ..+++..++.++.||++||.|||+ .+|+|+||||+|||++ .++.+||+|||++.
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~ 148 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSG 148 (308)
T ss_pred EEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCcc
Confidence 999999998 5888888755 468999999999999999999997 6999999999999995 56789999999986
Q ss_pred cccc-cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 265 TEDR-TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 265 ~~~~-~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
.... .....+++..|+|||++.+..++.++|||||||++|+|++|+.||...+.
T Consensus 149 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~ 203 (308)
T cd06615 149 QLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA 203 (308)
T ss_pred cccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch
Confidence 4322 22345788999999999888899999999999999999999999976653
No 173
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.7e-37 Score=330.30 Aligned_cols=275 Identities=35% Similarity=0.581 Sum_probs=220.8
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
|++.++||+|.||.||+|++..+++.||+|+++.. ....+.+..|+.+++.+ .|+||+++++++...+.+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~~~~ 73 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-------KHPNIVKLLDVIHTERKL 73 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-------CCCCHHHHHhhhhcCCce
Confidence 67788999999999999999999999999999864 33446677899999888 489999999999999999
Q ss_pred EEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
++||||++++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||+|+||+++ .++.+||+|||++....
T Consensus 74 ~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 74 YLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLARAFG 149 (282)
T ss_pred EEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEecCCcccccC
Confidence 9999999999999988763 3599999999999999999999999999999999999994 57899999999986543
Q ss_pred cc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 268 RT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 268 ~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
.. ......+..|+|||.+.+. .++.++|||||||++|||++|++||.+.+..+.+.++.+.++ .+.+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 228 (282)
T cd07829 150 IPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILG-TPTEESWPGVTK 228 (282)
T ss_pred CCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC-CCcHHHHHhhcc
Confidence 32 2233457789999999877 789999999999999999999999999998888889988888 554444443222
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
.. +++..- ..+....+.+.+ ...+
T Consensus 229 ~~-~~~~~~--------------------------------------~~~~~~~~~~~~-----------------~~~~ 252 (282)
T cd07829 229 LP-DYKPTF--------------------------------------PKFPPKDLEKVL-----------------PRLD 252 (282)
T ss_pred cc-cccccc--------------------------------------cccCccchHHhc-----------------cccc
Confidence 11 000000 000001111111 1124
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
..+.+||++||+.||++|||++|++.||||
T Consensus 253 ~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 253 PEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 578999999999999999999999999998
No 174
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=343.12 Aligned_cols=271 Identities=27% Similarity=0.429 Sum_probs=225.4
Q ss_pred ccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 106 ~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
.+.++|..+++||+|.||+|.+|+.+.+++++|||+++++ +......+.|-++|+.. .||.+..|.-.|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-------~HPFLt~LKYsF 237 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-------RHPFLTSLKYSF 237 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-------cCcHHHHhhhhh
Confidence 3457899999999999999999999999999999999975 23344456677777777 589999999999
Q ss_pred eecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 182 VCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 182 ~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
+..+++|+||||..| .|+-.|... +.+++...+.+-..|+.||.|||+++||.||||.+|+|+ +++|.|||+||
T Consensus 238 Qt~drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDF 312 (516)
T KOG0690|consen 238 QTQDRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDF 312 (516)
T ss_pred ccCceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeec
Confidence 999999999999984 666555443 469999999999999999999999999999999999999 68899999999
Q ss_pred CCccc---ccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 261 GSACT---EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 261 GlA~~---~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
|+++. ......+.|||+.|+|||++....|+.++|.|.+||+||||++|+.||...+...++..|.-
T Consensus 313 GLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~---------- 382 (516)
T KOG0690|consen 313 GLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM---------- 382 (516)
T ss_pred ccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh----------
Confidence 99964 45667788999999999999999999999999999999999999999987766554444331
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
+++.
T Consensus 383 ----------------------------------------------------------------------------ed~k 386 (516)
T KOG0690|consen 383 ----------------------------------------------------------------------------EDLK 386 (516)
T ss_pred ----------------------------------------------------------------------------hhcc
Confidence 0111
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCCCCCCCCCCCCCCCCcc
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPFTCPYQPPPETPRVPVA 474 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~~~~~~~~p~~p~~p~~ 474 (927)
-...++++++.||..+|..||++|+ .|.||.+|+||....|..-+....++|..|..
T Consensus 387 FPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqV 448 (516)
T KOG0690|consen 387 FPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQV 448 (516)
T ss_pred CCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCc
Confidence 1123456789999999999999998 58999999999999887666655555554443
No 175
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.6e-37 Score=330.49 Aligned_cols=198 Identities=25% Similarity=0.366 Sum_probs=165.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++++.||+|+||.||++++..+++.||||+++... .....+..|+.++.+. .+|+||+++++++...+.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~------~~~~~iv~~~~~~~~~~~ 74 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS------VDCPYTVTFYGALFREGD 74 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH------cCCCCeeeeeEEEecCCc
Confidence 47899999999999999999999999999999997542 2234455566654333 268999999999999999
Q ss_pred eEEEEecccchhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccC-CeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 187 LCICFELLDSNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~-gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+|+||||++++|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||++
T Consensus 75 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~~kl~dfg~~ 151 (283)
T cd06617 75 VWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQVKLCDFGIS 151 (283)
T ss_pred EEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeecccc
Confidence 99999999999888876532 24589999999999999999999997 999999999999994 6789999999998
Q ss_pred ccccccc--eeeccCCCCCCcchhcC----CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 264 CTEDRTV--YSYIQSRYYRSPEVLLG----YQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 264 ~~~~~~~--~~~~gT~~Y~APEvl~~----~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
....... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 7543221 22467888999999865 3578899999999999999999999953
No 176
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-38 Score=356.11 Aligned_cols=252 Identities=26% Similarity=0.391 Sum_probs=222.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|.++++||+|+||.+++++++...+.||+|+|... ....+.+..|+.+++++ .|||||.+++.|..++
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-------~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-------LHPNIVEYKDSFEEDG 76 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc-------cCCCeeeeccchhcCC
Confidence 6899999999999999999999999999999999753 23445778899999998 4899999999999998
Q ss_pred e-eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 186 H-LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 186 ~-l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
. +||||+||+ |+|.+.++..+...++++.+..++.||+.||.|||++.|+|||||+.|||++ .+..|||.|||+|
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGla 153 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLA 153 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhh
Confidence 8 999999998 5888999888767799999999999999999999999999999999999995 6678899999999
Q ss_pred ccccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 264 CTEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 264 ~~~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
+.... ...+++||+.|+.||++.+.+|+.|+|||||||++|||++-+++|.+.+-..++.+|.+... .|
T Consensus 154 K~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~-~P------- 225 (426)
T KOG0589|consen 154 KILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLY-SP------- 225 (426)
T ss_pred hhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccC-CC-------
Confidence 86554 34578999999999999999999999999999999999999999999988888888776443 11
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
...
T Consensus 226 -----------------------------------------------------------------------------lp~ 228 (426)
T KOG0589|consen 226 -----------------------------------------------------------------------------LPS 228 (426)
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 001
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
.++.+++.||+.||..+|+.||+|.++|.+|.+..
T Consensus 229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 229 MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 23457899999999999999999999999988874
No 177
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.8e-37 Score=331.86 Aligned_cols=211 Identities=36% Similarity=0.668 Sum_probs=178.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.++||+|+||.||+|.+..+++.||||++.... ...+.+.+|+++++.+ .|+||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~ 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-------RHENLVNLIEVFRRKK 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-------CCcchhhHHHhcccCC
Confidence 47999999999999999999999899999999986432 2345677899999888 5899999999999999
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+|+||||+.+.+++.+.... ..+++..++.++.||+.||+|||+.+|+|+||+|+||+++ .++.+||+|||++..
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~~~l~dfg~~~~ 149 (286)
T cd07846 74 RLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFART 149 (286)
T ss_pred eEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCcEEEEeeeeeee
Confidence 999999999975555443332 3589999999999999999999999999999999999994 678999999999864
Q ss_pred ccc---cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 002401 266 EDR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330 (927)
Q Consensus 266 ~~~---~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG 330 (927)
... ......++..|+|||++.+. .++.++|||||||++|||++|++||......+.+..+....+
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07846 150 LAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLG 218 (286)
T ss_pred ccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhC
Confidence 322 22234678899999998764 578899999999999999999999998888787777777666
No 178
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.4e-37 Score=334.00 Aligned_cols=254 Identities=29% Similarity=0.497 Sum_probs=206.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
++|+++++||.|+||.||++++..+++.||+|+++.. ....+.+..|+++++.+ +|+||+++++++.....+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~ 77 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-------KHPNIVGLYEAYFYENKL 77 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-------CCCceeEEEEEEecCCeE
Confidence 6899999999999999999999889999999999754 34456778899999988 489999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+++ +|.+++.... ..+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.+||+|||++...
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 78 WILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGDVKLADFGVSAKN 153 (280)
T ss_pred EEEeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCCEEEccCccchhh
Confidence 999999985 7777766543 4699999999999999999999999999999999999994 6789999999988643
Q ss_pred cc---cceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 267 DR---TVYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 267 ~~---~~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
.. ......++..|+|||++.. ..++.++|||||||++|+|++|++||...+....+..+.. + .++
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~-~~~---- 226 (280)
T cd06611 154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK--S-EPP---- 226 (280)
T ss_pred cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc--C-CCC----
Confidence 22 2234568889999999853 3578899999999999999999999977654443332211 0 000
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
. + ..
T Consensus 227 -----------------~------------------------------------~-----------------------~~ 230 (280)
T cd06611 227 -----------------T------------------------------------L-----------------------DQ 230 (280)
T ss_pred -----------------C------------------------------------c-----------------------CC
Confidence 0 0 00
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
...++..+.+||.+||+.||.+|||++++|+||||...
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 231 PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 01123468899999999999999999999999999864
No 179
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.9e-37 Score=322.88 Aligned_cols=201 Identities=28% Similarity=0.461 Sum_probs=174.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
++|++.++||.|+||.||+|++..+++.+|+|++.... ...+.+.+|+++++.+ +|+||+++++++...+.+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~~~~~ 75 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-------RHPNIVAYFGSYLRRDKL 75 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-------CCCChhceEEEEEeCCEE
Confidence 68999999999999999999999999999999998643 3456788899999988 589999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+++ +|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||++...
T Consensus 76 ~l~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 76 WIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSAQL 151 (262)
T ss_pred EEEEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccchhh
Confidence 999999985 7777766542 4699999999999999999999999999999999999994 6688999999998654
Q ss_pred ccc---ceeeccCCCCCCcchhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~---~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
... .....++..|+|||++.+. .++.++|||||||++|+|++|+.||...+...
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 322 2334678889999999877 88999999999999999999999997765443
No 180
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.2e-37 Score=332.38 Aligned_cols=192 Identities=28% Similarity=0.495 Sum_probs=167.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|+++++||+|+||.||+|++..+++.||||++..+ ......+.+|+++++++ +|+||++++++|...+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~ 73 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC-------DSPYIIGFYGAFFVENR 73 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-------CCCCeeeEEEEEEECCE
Confidence 3688999999999999999999999999999999754 33345678899999888 58999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
.++||||+++..++.. ..+++..+..++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||++...
T Consensus 74 ~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~ 145 (279)
T cd06619 74 ISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQL 145 (279)
T ss_pred EEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceec
Confidence 9999999996544332 2478999999999999999999999999999999999994 6789999999998654
Q ss_pred cc-cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 267 DR-TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 267 ~~-~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
.. .....+++..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 146 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 146 VNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred ccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 32 23345788999999999988999999999999999999999999964
No 181
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.3e-37 Score=322.93 Aligned_cols=203 Identities=30% Similarity=0.400 Sum_probs=175.4
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+++|+.+ +|+||+++++.+...+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~~~ 73 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-------SHPNIIEYYENFLEDKA 73 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-------CCCchhheeeeEecCCE
Confidence 589999999999999999999999999999998753 23456778899999988 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+++||||+. ++|.+++.......+++..++.++.||+.+|+|||+++|+|+||||+||+++ .....+||+|||++..
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 74 LMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKI 151 (256)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCcee
Confidence 999999997 5899988776545689999999999999999999999999999999999995 3456789999999975
Q ss_pred cccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002401 266 EDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321 (927)
Q Consensus 266 ~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~ 321 (927)
.... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~ 209 (256)
T cd08220 152 LSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL 209 (256)
T ss_pred cCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH
Confidence 4332 2234678899999999988899999999999999999999999976654443
No 182
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.8e-37 Score=330.31 Aligned_cols=278 Identities=35% Similarity=0.588 Sum_probs=216.5
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
|++.+.||+|+||.||+|++..+++.||||++..... ......+|+..++++. +|+||+++++++...+..|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~h~~i~~~~~~~~~~~~~~ 74 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN------EHPNIVKLKEVFRENDELY 74 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc------CCCCchhHHHHhhcCCcEE
Confidence 6788999999999999999999999999999875422 2223456777777773 3899999999999999999
Q ss_pred EEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 189 LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
+||||+.++|.+.+.......+++..++.++.||+.+|.|||+++|+|+||||+||+++ ..+.++|+|||++.....
T Consensus 75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 75 FVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIADFGLAREIRS 151 (283)
T ss_pred EEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEeecccceeccC
Confidence 99999999999988776545689999999999999999999999999999999999994 678999999999965433
Q ss_pred --cceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcc
Q 002401 269 --TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTS 345 (927)
Q Consensus 269 --~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~ 345 (927)
......++..|+|||++.. ..++.++|||||||++|||++|++||......+.+.++...++ .+....+.+.....
T Consensus 152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 230 (283)
T cd07830 152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLG-TPTKQDWPEGYKLA 230 (283)
T ss_pred CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcC-CCChhhhhhHhhhh
Confidence 2234567889999998864 4688999999999999999999999999998899999988888 44333332211110
Q ss_pred hhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHH
Q 002401 346 KFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLA 425 (927)
Q Consensus 346 ~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~ 425 (927)
..+... . .......+.+.+ ...+..
T Consensus 231 ~~~~~~--------------------~------------------~~~~~~~~~~~~-----------------~~~~~~ 255 (283)
T cd07830 231 SKLGFR--------------------F------------------PQFAPTSLHQLI-----------------PNASPE 255 (283)
T ss_pred cccccc--------------------c------------------cccccccHHHHc-----------------ccCCHH
Confidence 000000 0 000000011111 012357
Q ss_pred HHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 426 LVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 426 l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+++||++||..||++|||++|++.||||
T Consensus 256 ~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 256 AIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred HHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 8999999999999999999999999997
No 183
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-37 Score=339.08 Aligned_cols=200 Identities=22% Similarity=0.416 Sum_probs=172.7
Q ss_pred cccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 105 AETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 105 ~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.....+|+++++||+|+||.||++++..+++.||||.+.... ...+.+.+|+.+++.+ +|+||++++++|..
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~ 87 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN-------KNPNIVNYLDSYLV 87 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC-------CCCCEeeEEEEEec
Confidence 344589999999999999999999999999999999997532 3345677889888887 58999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+++|+||||++ ++|.+++... .+++..+..++.||+.||.|||+.+|+|+||||+|||++ .++.+||+|||+
T Consensus 88 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~ 161 (297)
T cd06656 88 GDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGF 161 (297)
T ss_pred CCEEEEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEECcCcc
Confidence 999999999997 5787777543 489999999999999999999999999999999999994 668899999999
Q ss_pred ccccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 263 ACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 263 A~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
+...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~ 219 (297)
T cd06656 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (297)
T ss_pred ceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 8643222 223467889999999998889999999999999999999999997644
No 184
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=7.2e-37 Score=330.79 Aligned_cols=204 Identities=26% Similarity=0.408 Sum_probs=170.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec---
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ--- 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~--- 184 (927)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.........+.+|+.+++++. +|+||++++++|...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~------~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP------NHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc------CCCCeEEEEEEEEecccc
Confidence 37899999999999999999999999999999999865444566778999988884 489999999998754
Q ss_pred --ceeEEEEeccc-chhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 185 --RHLCICFELLD-SNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 185 --~~l~LVmEy~~-GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
+.+|+||||+. ++|.+++... ....+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl~d 171 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKLVD 171 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEee
Confidence 36899999997 5888877542 234689999999999999999999999999999999999994 567899999
Q ss_pred cCCcccccc---cceeeccCCCCCCcchhcCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 260 FGSACTEDR---TVYSYIQSRYYRSPEVLLGY-----QYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 260 FGlA~~~~~---~~~~~~gT~~Y~APEvl~~~-----~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
||++..... ......++..|+|||++... .++.++||||||||+|||++|++||......+
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~ 240 (291)
T cd06639 172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK 240 (291)
T ss_pred cccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence 999865332 12234678889999998643 36889999999999999999999997655433
No 185
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-40 Score=345.66 Aligned_cols=254 Identities=25% Similarity=0.428 Sum_probs=215.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
+-|.++++||+|+||.||+|.++++|+.||||.+..+. ..++++.||.||+++. .++||++|+.|.....++
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-DLQEIIKEISIMQQC~-------S~yVVKYYGSYFK~sDLW 104 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-DLQEIIKEISIMQQCK-------SKYVVKYYGSYFKHSDLW 104 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-hHHHHHHHHHHHHHcC-------CchhhhhhhhhccCCceE
Confidence 56778899999999999999999999999999998654 4678899999999994 679999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
||||||+ |+..++++..+ +.|.+.++..+++.-|+||+|||...-||||||..|||+ +.++..||+|||.|....
T Consensus 105 IVMEYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLT 180 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLT 180 (502)
T ss_pred eehhhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhh
Confidence 9999998 78888888765 689999999999999999999999999999999999999 477999999999997655
Q ss_pred cc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhc
Q 002401 268 RT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNT 344 (927)
Q Consensus 268 ~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~ 344 (927)
+. ..+.+||++|||||++..-.|+.++||||||++..||..|++||........+..|-. .+||
T Consensus 181 DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT---~PPP---------- 247 (502)
T KOG0574|consen 181 DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT---KPPP---------- 247 (502)
T ss_pred hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC---CCCC----------
Confidence 43 3567999999999999999999999999999999999999999965433221111100 0000
Q ss_pred chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHH
Q 002401 345 SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRL 424 (927)
Q Consensus 345 ~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~ 424 (927)
.| .+....+.
T Consensus 248 -----------------------------------------------TF-----------------------~KPE~WS~ 257 (502)
T KOG0574|consen 248 -----------------------------------------------TF-----------------------KKPEEWSS 257 (502)
T ss_pred -----------------------------------------------CC-----------------------CChHhhhh
Confidence 01 11223456
Q ss_pred HHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 425 ALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 425 ~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
+|.|||++||...|++|-||.++++|||++..+
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 899999999999999999999999999999754
No 186
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-38 Score=335.74 Aligned_cols=270 Identities=27% Similarity=0.393 Sum_probs=211.1
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChh-hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEec
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL 193 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~-~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy 193 (927)
+.||+|+|+.|--|+...++..+|||+|.+... ...++.+|++++.... +|+||++|+++|+++..+|||||-
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq------gh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ------GHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc------CCccHHHHHHHhcccceEEEEEec
Confidence 479999999999999999999999999987643 4567889999999885 699999999999999999999999
Q ss_pred cc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc-----
Q 002401 194 LD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED----- 267 (927)
Q Consensus 194 ~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~----- 267 (927)
|. |.|+..|.+.. .++|.++..++++|+.||.|||.+||.||||||+|||....+.-.-||||||.++....
T Consensus 158 m~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~ 235 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC 235 (463)
T ss_pred ccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence 97 57888877764 59999999999999999999999999999999999999766666778999999884211
Q ss_pred -----ccceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 268 -----RTVYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 268 -----~~~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
....+.+|+..|||||+..- ..|+.++|.||||||||-||.|.+||.|....+ .|
T Consensus 236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d--------CG------- 300 (463)
T KOG0607|consen 236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD--------CG------- 300 (463)
T ss_pred CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc--------CC-------
Confidence 12345688889999998742 259999999999999999999999998754322 11
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
|.+.... ..++. .-++... .++--|++ .
T Consensus 301 WdrGe~C-----------------------r~CQ~---~LFesIQ-----EGkYeFPd---------------------k 328 (463)
T KOG0607|consen 301 WDRGEVC-----------------------RVCQN---KLFESIQ-----EGKYEFPD---------------------K 328 (463)
T ss_pred ccCCCcc-----------------------HHHHH---HHHHHHh-----ccCCcCCh---------------------h
Confidence 0000000 00110 0111100 01111211 2
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
.+..++.+++|||+.+|..|+.+|.+|.++|+|||+......
T Consensus 329 dWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 329 DWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred hhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 355678899999999999999999999999999999876433
No 187
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.1e-37 Score=332.87 Aligned_cols=278 Identities=31% Similarity=0.518 Sum_probs=214.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++|++.++||+|+||.||+|.+..+++.||||+++.. ......+.+|+++++.+ .|+||+++++++....
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-------~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-------NHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-------CCCCeeeeeheecCcc
Confidence 7899999999999999999999999999999999753 22334567899999988 4899999999987655
Q ss_pred ----------eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeE
Q 002401 186 ----------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI 255 (927)
Q Consensus 186 ----------~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~I 255 (927)
.+||||||++++|.+++... ...+++..++.++.||+.||+|||+.+|+|+||||+||+++ ..+.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~ 155 (302)
T cd07864 80 DALDFKKDKGAFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN---NKGQI 155 (302)
T ss_pred hhhhccccCCcEEEEEcccCccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCcE
Confidence 79999999999888877654 34689999999999999999999999999999999999994 67899
Q ss_pred EEeecCCcccccccc----eeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 002401 256 KIIDFGSACTEDRTV----YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330 (927)
Q Consensus 256 KL~DFGlA~~~~~~~----~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG 330 (927)
||+|||++....... .....+..|+|||++.+. .++.++|||||||++|||++|++||...+..+.+..+.+..+
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T cd07864 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCG 235 (302)
T ss_pred EeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 999999986543221 123457789999988754 578999999999999999999999998888888888888777
Q ss_pred CCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCC
Q 002401 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN 410 (927)
Q Consensus 331 ~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ 410 (927)
..++ ..++.......+..... +.... ..+...
T Consensus 236 ~~~~-~~~~~~~~~~~~~~~~~-------------------------------------~~~~~-~~~~~~--------- 267 (302)
T cd07864 236 SPCP-AVWPDVIKLPYFNTMKP-------------------------------------KKQYR-RRLREE--------- 267 (302)
T ss_pred CCCh-hhccccccccccccccc-------------------------------------ccccc-cchhhh---------
Confidence 3333 22221111000000000 00000 000000
Q ss_pred CChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 411 ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
...++..+.+||.+||..||++|||++|+|+||||
T Consensus 268 --------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 268 --------FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred --------cCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 01134578999999999999999999999999997
No 188
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=7.8e-37 Score=323.17 Aligned_cols=249 Identities=26% Similarity=0.396 Sum_probs=206.6
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.++||+|+||.||++++..+++.||||++... ......+.+|+.+++.+ +|+||+++++++...++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-------KHPNIVQYQESFEENGN 73 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-------CCCCeeeeEeeecCCCe
Confidence 689999999999999999999999999999998743 33445788899999988 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.|+||||+. ++|.+.+.......+++..++.++.||+.||+|||+++|+|+||+|+|||++ .++.++|+|||++..
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~~ 150 (256)
T cd08218 74 LYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGIARV 150 (256)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeeccceee
Confidence 999999997 5888888765444689999999999999999999999999999999999994 567899999999865
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....++..|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+..+.. + ..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~-~~~-------- 219 (256)
T cd08218 151 LNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--G-SYP-------- 219 (256)
T ss_pred cCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--C-CCC--------
Confidence 4332 1234578889999999988899999999999999999999999976655544433321 1 000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
. . ....
T Consensus 220 --------------------------------------------~-----------------~-------------~~~~ 225 (256)
T cd08218 220 --------------------------------------------P-----------------V-------------SSHY 225 (256)
T ss_pred --------------------------------------------C-----------------C-------------cccC
Confidence 0 0 0012
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+.++.+||.+||+.||++||++.|+|+||||
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 226 SYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 3468899999999999999999999999998
No 189
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.5e-36 Score=336.82 Aligned_cols=279 Identities=33% Similarity=0.617 Sum_probs=221.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee-
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC- 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~- 183 (927)
.++|++++.||.|+||.||+|++..+++.||||++.+. ....+.+..|+++++.+ .||||++++++|..
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~ 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-------RHENIISLSDIFISP 81 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-------CCCCeeeEeeeEecC
Confidence 47899999999999999999999999999999988642 23345677899999988 58999999999876
Q ss_pred cceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 184 QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 184 ~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
...+|+||||++++|.+++... .+++..+..++.||++||+|||+++|+|+||||.|||++ ..+.+||+|||++
T Consensus 82 ~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~---~~~~~~l~dfg~~ 155 (328)
T cd07856 82 LEDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLA 155 (328)
T ss_pred CCcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---CCCCEEeCccccc
Confidence 5679999999998888877643 488999999999999999999999999999999999994 6788999999999
Q ss_pred ccccccceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 264 CTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 264 ~~~~~~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
...........++..|+|||++.+ ..++.++|||||||++|+|++|++||...........+.+.++ .+++.+.....
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 234 (328)
T cd07856 156 RIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLG-TPPDDVINTIC 234 (328)
T ss_pred cccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCCHHHHHhcc
Confidence 766555455677889999999876 4789999999999999999999999999888888888888888 55554433211
Q ss_pred hc--chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 343 NT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 343 ~~--~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
.. .+++.... . .. .....+.+ .
T Consensus 235 ~~~~~~~~~~~~-------------------------------~-----~~---~~~~~~~~-----------------~ 258 (328)
T cd07856 235 SENTLRFVQSLP-------------------------------K-----RE---PVPFSEKF-----------------K 258 (328)
T ss_pred chhhHHHHhhcc-------------------------------c-----cC---CCcHHHHc-----------------C
Confidence 00 00000000 0 00 00000111 1
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.++..+.+||++||+.||++|||++|+|.||||...
T Consensus 259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~ 294 (328)
T cd07856 259 NADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY 294 (328)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence 234678999999999999999999999999999764
No 190
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.1e-37 Score=340.28 Aligned_cols=283 Identities=32% Similarity=0.592 Sum_probs=219.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.++|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+. +|+||++++++|...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~------~h~ni~~~~~~~~~~ 79 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG------DHPNIVKLLNVIKAE 79 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc------CCCCccceeeeeccC
Confidence 47999999999999999999999999999999988542 233445677999999883 389999999998754
Q ss_pred --ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 185 --RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 185 --~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
..+|+||||+.++|.+++... .+++..++.++.||+.||+|||++||+|+||||+|||++ .++.+||+|||+
T Consensus 80 ~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~---~~~~~kl~d~g~ 153 (337)
T cd07852 80 NDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN---SDCRVKLADFGL 153 (337)
T ss_pred CCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccc
Confidence 368999999999998887654 588999999999999999999999999999999999994 678999999999
Q ss_pred cccccc--------cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 263 ACTEDR--------TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 263 A~~~~~--------~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
+..... ....+.++..|+|||++.+. .++.++|||||||++|+|++|+.||.+....+.+.++....+ .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~-~~ 232 (337)
T cd07852 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG-PP 232 (337)
T ss_pred hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CC
Confidence 864321 22235678899999988654 688999999999999999999999999988888888888877 44
Q ss_pred ChHHHHHhhhc--chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCC
Q 002401 334 PDYVLKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL 411 (927)
Q Consensus 334 P~~~l~~~~~~--~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~l 411 (927)
+...+...... ..+++... ......+..++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~--------- 264 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLP---------------------------------------SRPRKPLDELL--------- 264 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcc---------------------------------------cccccchhhhc---------
Confidence 43322211100 00000000 00000111111
Q ss_pred ChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 412 SMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 412 s~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
..++.++.+||.+||+.||++|||+.|+|+||||+....+
T Consensus 265 --------~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 265 --------PKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred --------cCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 1145688999999999999999999999999999886443
No 191
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.8e-37 Score=330.49 Aligned_cols=202 Identities=26% Similarity=0.409 Sum_probs=169.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe-----
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV----- 182 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~----- 182 (927)
.++|++++.||+|+||.||+|++..+++.||||+++........+.+|+.+++.+. +|+||+++++++.
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~------~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS------DHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh------cCCCeeeeeeeeeecccC
Confidence 37999999999999999999999999999999998765444566778999999884 4899999999884
Q ss_pred ecceeEEEEeccc-chhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 183 CQRHLCICFELLD-SNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
..+.+++||||++ ++|.+++... ....+++..++.++.||+.||.|||+++|+||||||+||+++ ..+.+||+|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEEcc
Confidence 3457999999997 5787776532 224588999999999999999999999999999999999994 567899999
Q ss_pred cCCcccccc---cceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 260 FGSACTEDR---TVYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 260 FGlA~~~~~---~~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
||++..... ......++..|+|||++.. ..++.++|||||||++|||++|+.||.....
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~ 234 (286)
T cd06638 168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP 234 (286)
T ss_pred CCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch
Confidence 999865332 2233468899999999853 3578999999999999999999999976543
No 192
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7.4e-37 Score=323.87 Aligned_cols=202 Identities=26% Similarity=0.420 Sum_probs=173.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.+.||.|+||+||+|.+..+++.||+|++... ......+.+|+++|+.+ .|+||+++++.+...+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-------NHPNVVKYYTSFVVGDE 73 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-------CCCCEEEEEEEEeeCCE
Confidence 4799999999999999999998889999999999753 23456788899998888 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhcc-CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 187 LCICFELLD-SNLYELIKINHF-RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~-~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
+++|||++. ++|.+++..... ..+++..++.++.||+.||+|||+.||+|+||||+||+++ +++.+||+|||++.
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~~~~ 150 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFGVSA 150 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccchHH
Confidence 999999997 588888876533 4689999999999999999999999999999999999995 56789999999985
Q ss_pred ccccc-------ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 265 TEDRT-------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 265 ~~~~~-------~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
..... .....++..|+|||++... .++.++|||||||++|+|++|+.||...+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~ 214 (267)
T cd06610 151 SLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK 214 (267)
T ss_pred HhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh
Confidence 43221 1234678899999999877 78999999999999999999999997655433
No 193
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.3e-36 Score=321.48 Aligned_cols=249 Identities=28% Similarity=0.455 Sum_probs=208.5
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++++.||+|+||.||.+++..+++.|++|++... ......+.+|+++++++ +|+||+++++++...+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~~~~ 73 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-------QHPNIIAYYNHFMDDNT 73 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-------CCCCeeEEEeEEecCCe
Confidence 689999999999999999999999999999998743 34456778899999988 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+++||||+. ++|.+++.......+++..++.++.||+.+|+|||+.+|+|+||||+||+++ .++.+||+|||++..
T Consensus 74 ~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~ 150 (256)
T cd08221 74 LLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKI 150 (256)
T ss_pred EEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEE
Confidence 999999997 5899988776445689999999999999999999999999999999999995 567899999999865
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....++..|+|||++.+..++.++|||||||++|||++|..||......+....+.. + ..+
T Consensus 151 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~-~~~-------- 219 (256)
T cd08221 151 LGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--G-NYT-------- 219 (256)
T ss_pred cccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--C-CCC--------
Confidence 4322 2345678999999999988899999999999999999999999987665554444321 1 000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
+ ....+
T Consensus 220 -------------------------------------------~-------------------------------~~~~~ 225 (256)
T cd08221 220 -------------------------------------------P-------------------------------VVSVY 225 (256)
T ss_pred -------------------------------------------C-------------------------------Ccccc
Confidence 0 00012
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
+..+.+||.+||..||++|||++|+|+|+|+
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 226 SSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 3468899999999999999999999999996
No 194
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.4e-37 Score=326.37 Aligned_cols=197 Identities=31% Similarity=0.515 Sum_probs=168.9
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
+|.+.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ +|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~ 73 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-------QHENIVQYLG 73 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-------CCCCeeeEEE
Confidence 4778899999999999999999999999999886431 1234567888999888 5899999999
Q ss_pred EEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 180 YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
++...+..++||||+.+ +|.+++... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+
T Consensus 74 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---~~~~~~l~ 148 (267)
T cd06628 74 SSLDADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---NKGGIKIS 148 (267)
T ss_pred EEEeCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---CCCCEEec
Confidence 99999999999999974 788888654 4689999999999999999999999999999999999994 67889999
Q ss_pred ecCCccccccc---------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 259 DFGSACTEDRT---------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 259 DFGlA~~~~~~---------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 217 (267)
T cd06628 149 DFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ 217 (267)
T ss_pred ccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH
Confidence 99998654311 1123577889999999988899999999999999999999999976544
No 195
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5.1e-37 Score=328.69 Aligned_cols=251 Identities=25% Similarity=0.428 Sum_probs=207.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.+.||.|+||.||++++..+++.||||++.... .....+.+|+++++.+ .|+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~ 73 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-------RSPYITKYYGSFLKGSK 73 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc-------CCCCeeeeeEEEEECCe
Confidence 47889999999999999999999999999999997542 3345677899999988 48999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+|+||+. ++|.+++... .+++..++.++.||+.||.|||+++|+|+||+|+||+++ .++.++|+|||++..
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~ 147 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQ 147 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccccccee
Confidence 999999997 5888887654 589999999999999999999999999999999999994 678899999999965
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....++..|+|||++.+..++.++|||||||++|+|++|..||...+.......+..... +
T Consensus 148 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~-------- 216 (274)
T cd06609 148 LTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNP---P-------- 216 (274)
T ss_pred ecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCC---C--------
Confidence 5432 2345678889999999988899999999999999999999999976553332222211000 0
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
.. + +..+
T Consensus 217 --------------------------------------------~~-----------------~------------~~~~ 223 (274)
T cd06609 217 --------------------------------------------SL-----------------E------------GNKF 223 (274)
T ss_pred --------------------------------------------CC-----------------c------------cccc
Confidence 00 0 0002
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+..+.+||.+||..||++|||++++++||||++.
T Consensus 224 ~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 224 SKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 3468899999999999999999999999999874
No 196
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.4e-36 Score=336.40 Aligned_cols=280 Identities=33% Similarity=0.557 Sum_probs=218.2
Q ss_pred ceEEEEEeccCCceeEEEeeccCC--CeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEM--NSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~t--g~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
+|++.+.||+|+||.||++++..+ ++.||||++... ....+.+.+|+.+++++. +|+||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~~~~~~~ 74 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR------GHKNITCLYDMDIVF 74 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc------CCCChheeeeeeeec
Confidence 588999999999999999999888 889999998742 223456778999999884 489999999875432
Q ss_pred ----ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 185 ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 185 ----~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
..+|+++|+++++|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus 75 ~~~~~~~~~~~e~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Df 149 (332)
T cd07857 75 PGNFNELYLYEELMEADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDF 149 (332)
T ss_pred cccCCcEEEEEecccCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcC
Confidence 468999999999999888654 4699999999999999999999999999999999999994 6688999999
Q ss_pred CCcccccc-------cceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 002401 261 GSACTEDR-------TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332 (927)
Q Consensus 261 GlA~~~~~-------~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~ 332 (927)
|++..... ......++..|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+.+..++..++ .
T Consensus 150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~ 228 (332)
T cd07857 150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG-T 228 (332)
T ss_pred CCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC-C
Confidence 99864321 1223467889999998876 4789999999999999999999999999999999999999999 5
Q ss_pred CChHHHHHhhhcc--hhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCC
Q 002401 333 PPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN 410 (927)
Q Consensus 333 PP~~~l~~~~~~~--~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ 410 (927)
+++..+....... .+..... . .....+..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------~--------~~~~~~~~~--------- 260 (332)
T cd07857 229 PDEETLSRIGSPKAQNYIRSLP-------------------------------N--------IPKKPFESI--------- 260 (332)
T ss_pred CCHHHHHhhhhhhHHHHHHhcc-------------------------------c--------cCCcchHhh---------
Confidence 5544433211100 0000000 0 000001110
Q ss_pred CChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 411 ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
....+..+.+||.+||+.||++|||+.|+|+||||+...
T Consensus 261 --------~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 261 --------FPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred --------CCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 011245789999999999999999999999999998653
No 197
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.1e-37 Score=324.74 Aligned_cols=196 Identities=26% Similarity=0.454 Sum_probs=167.1
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
+|++.+.||+|+||.||+|.+ .+++.+|||+++... .....+.+|+++|+.+ +|+||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~ 72 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-------KHVNIVQYLGTCL 72 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-------CCCCEeeEeeEee
Confidence 578899999999999999976 478899999987432 2234577888888888 4899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
..+.+|+||||+. ++|.+++... ..+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.+||+|||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg 147 (265)
T cd06631 73 DDNTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFG 147 (265)
T ss_pred cCCeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccch
Confidence 9999999999997 4888888654 3589999999999999999999999999999999999994 67899999999
Q ss_pred Cccccc---------ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 262 SACTED---------RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 262 lA~~~~---------~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
++.... .......++..|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 213 (265)
T cd06631 148 CARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR 213 (265)
T ss_pred hhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh
Confidence 986431 112234678899999999988999999999999999999999999976543
No 198
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.9e-37 Score=328.92 Aligned_cols=197 Identities=27% Similarity=0.462 Sum_probs=170.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
++|++.++||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.+ +|+||+++++++...+.+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-------~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-------KHSNIVAYFGSYLRRDKL 81 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC-------CCCCeeeEEEEEEeCCEE
Confidence 68999999999999999999999999999999998643 3344567888888888 589999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||++ ++|.+++... ..+++.+++.++.||+.||+|||++||+|+||||+||+++ ..+.+||+|||++...
T Consensus 82 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQI 156 (267)
T ss_pred EEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeeeEc
Confidence 99999998 5888887654 3699999999999999999999999999999999999994 6688999999998643
Q ss_pred ccc---ceeeccCCCCCCcchhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 267 DRT---VYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~---~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
... .....++..|+|||++. ...++.++|||||||++|+|++|..||....
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~ 213 (267)
T cd06645 157 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred cCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence 322 23347889999999985 4468899999999999999999999986543
No 199
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=353.57 Aligned_cols=211 Identities=28% Similarity=0.376 Sum_probs=185.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
+.+++++.||+|.||.||++....+ ..||+|.++......+.+.+|++||++| .|+|||+++++|..++.+|
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L-------~H~~lV~l~gV~~~~~piy 277 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKL-------RHEKLVKLYGVCTKQEPIY 277 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhC-------cccCeEEEEEEEecCCceE
Confidence 4667788999999999999965433 3699999998766678889999999999 4899999999999988999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
||||||. |+|+++|+......+...+...++.|||+|++||+++++|||||...|||| +++..+||+|||+|+...
T Consensus 278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccC
Confidence 9999998 899999998666779999999999999999999999999999999999999 467899999999999655
Q ss_pred ccceee-cc---CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhC
Q 002401 268 RTVYSY-IQ---SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILG 330 (927)
Q Consensus 268 ~~~~~~-~g---T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~~~lG 330 (927)
+..+.. .+ ...|.|||.+....++.|+|||||||+||||+| |+.||++.+..++++.+.+...
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR 422 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR 422 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc
Confidence 444332 22 456999999999999999999999999999999 9999999999999888876443
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-36 Score=332.49 Aligned_cols=252 Identities=24% Similarity=0.424 Sum_probs=206.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.+|++.++||.|+||.||++.+..+++.||||.+... ....+.+.+|+.+++.+ .|+||+++++++...+.+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~~ 91 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-------KNPNIVNFLDSFLVGDEL 91 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc-------CCCceeeeeeeEecCceE
Confidence 6899999999999999999999999999999998753 23345677899999888 589999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+.+ +|.+++... .+++.++..++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||++...
T Consensus 92 ~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCAQI 165 (296)
T ss_pred EEEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccchhc
Confidence 999999985 677766543 489999999999999999999999999999999999994 5688999999998643
Q ss_pred ccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+..+.+..+... . .++
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~-~~~--------- 234 (296)
T cd06655 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-G-TPE--------- 234 (296)
T ss_pred ccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-C-Ccc---------
Confidence 322 22346788999999999888999999999999999999999999876654433322110 0 000
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
+.....++
T Consensus 235 ------------------------------------------------------------------------~~~~~~~~ 242 (296)
T cd06655 235 ------------------------------------------------------------------------LQNPEKLS 242 (296)
T ss_pred ------------------------------------------------------------------------cCCcccCC
Confidence 00001133
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
..+.+||++||..||++|||+.++++||||...
T Consensus 243 ~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 243 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 578899999999999999999999999999854
No 201
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.2e-37 Score=326.99 Aligned_cols=197 Identities=28% Similarity=0.461 Sum_probs=169.1
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
.++|++.+.||+|+||.||+|++..+++.||+|+++... .....+.+|+.+++.+ .|+||+++++++..++.
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-------~h~~ii~~~~~~~~~~~ 80 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-------KHCNIVAYFGSYLSREK 80 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc-------CCCCeeeeeEEEEeCCE
Confidence 368999999999999999999999999999999997542 3345677899998888 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+++||||++ ++|.+++... ..+++..+..++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||++..
T Consensus 81 ~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~ 155 (267)
T cd06646 81 LWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVKLADFGVAAK 155 (267)
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEECcCcccee
Confidence 999999998 5788877654 3689999999999999999999999999999999999994 667899999999865
Q ss_pred cccc---ceeeccCCCCCCcchhcC---CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLG---YQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~---~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
.... .....++..|+|||.+.. ..++.++|||||||++|||++|..||...
T Consensus 156 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 156 ITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred ecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 4322 233467889999999853 35788999999999999999999998543
No 202
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.7e-37 Score=331.04 Aligned_cols=257 Identities=26% Similarity=0.417 Sum_probs=205.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++++.||+|+||.||+|++..+++.||+|+++.. ......+.+|+++++++ .|+||+++++++...+.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~~~ 73 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA-------VSPYIVDFYGAFFIEGA 73 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-------CCCcHHhhhhheecCCe
Confidence 3788999999999999999999999999999998753 33456788899999988 48999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhc-cCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 187 LCICFELLDS-NLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~-~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+|+||||+.+ +|..++.... ...+++..++.++.||+.||.|||+ .+|+|+||||+||+++ .++.+||+|||++
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~ 150 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVS 150 (286)
T ss_pred EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCc
Confidence 9999999985 7777765531 2368999999999999999999996 6999999999999995 5788999999998
Q ss_pred cccc-ccceeeccCCCCCCcchhcCC------CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChH
Q 002401 264 CTED-RTVYSYIQSRYYRSPEVLLGY------QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY 336 (927)
Q Consensus 264 ~~~~-~~~~~~~gT~~Y~APEvl~~~------~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~ 336 (927)
.... .......++..|+|||++.+. .++.++|||||||++|+|++|+.||...........+.......++.
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 229 (286)
T cd06622 151 GNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPT- 229 (286)
T ss_pred ccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCC-
Confidence 6542 223344678889999998654 35889999999999999999999997654333332222211100000
Q ss_pred HHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 337 ~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
+
T Consensus 230 --------------------------------------------------------------------~----------- 230 (286)
T cd06622 230 --------------------------------------------------------------------L----------- 230 (286)
T ss_pred --------------------------------------------------------------------C-----------
Confidence 0
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
...++.++.+||.+||..||++||+++|+++||||....
T Consensus 231 --~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 231 --PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred --CcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 011345788999999999999999999999999998764
No 203
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.1e-37 Score=325.16 Aligned_cols=197 Identities=25% Similarity=0.456 Sum_probs=168.8
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
+|++.+.||+|+||.||++.+..+++.||+|+++... ...+.+.+|+++++.+ .|+||+++++++.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~ 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-------NHPHIIRMLGATC 73 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-------CCCceehhhceec
Confidence 4778899999999999999999999999999997432 2356778899999998 5899999999999
Q ss_pred ecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
+.+++++||||+.+ +|.+++... ..+++..++.++.||+.||+|||++||+|+||||+||+++ .....+||+|||
T Consensus 74 ~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~--~~~~~~~l~dfg 149 (268)
T cd06630 74 EDSHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID--STGQRLRIADFG 149 (268)
T ss_pred cCCeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEcccc
Confidence 99999999999984 788887654 3689999999999999999999999999999999999995 233469999999
Q ss_pred Cccccccc-------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 262 SACTEDRT-------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 262 lA~~~~~~-------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
.+...... .....++..|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 212 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEK 212 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 98643321 123457888999999988899999999999999999999999996543
No 204
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.6e-36 Score=331.44 Aligned_cols=256 Identities=26% Similarity=0.442 Sum_probs=207.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++++.||+|+||.||++.+..+++.||||.++... .....+.+|+++++.+ .|+||+++++.+..+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~ 73 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-------ENPFVVSMFCSFETK 73 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-------CCCCeeeeEEEEecC
Confidence 36899999999999999999999999999999997542 2334566788888877 589999999999999
Q ss_pred ceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+++|+||||+++ +|.+++... ..+++..++.++.||+.||+|||+++|+||||||+||+++ ..+.+||+|||++
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~ 148 (305)
T cd05609 74 RHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLTDFGLS 148 (305)
T ss_pred CEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEeeCCCc
Confidence 999999999985 788887654 3689999999999999999999999999999999999994 6789999999988
Q ss_pred cccccc------------------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 264 CTEDRT------------------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 264 ~~~~~~------------------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
...... .....++..|+|||.+....++.++|||||||++|||++|..||.+....+.+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~ 228 (305)
T cd05609 149 KIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 228 (305)
T ss_pred cccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 531100 01134677899999999889999999999999999999999999876655544433
Q ss_pred HHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhC
Q 002401 326 IRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNY 405 (927)
Q Consensus 326 ~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~ 405 (927)
..... ..
T Consensus 229 ~~~~~-~~------------------------------------------------------------------------ 235 (305)
T cd05609 229 ISDDI-EW------------------------------------------------------------------------ 235 (305)
T ss_pred Hhccc-CC------------------------------------------------------------------------
Confidence 22100 00
Q ss_pred CCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCC---HHHHHhCCCcCCCCCC
Q 002401 406 PYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWS---PFQASRHPFVTGEPFT 459 (927)
Q Consensus 406 P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpT---A~EaLqHPwf~~~~~~ 459 (927)
|. .....+..+.+||++||..||++||| +.|+|+||||....+.
T Consensus 236 ~~----------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 236 PE----------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred CC----------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHH
Confidence 00 00012356889999999999999998 8999999999876553
No 205
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1e-36 Score=329.60 Aligned_cols=192 Identities=27% Similarity=0.452 Sum_probs=158.9
Q ss_pred EeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
+||+|+||.||++.+..+++.||||++.+.. .......+|..+++.+.. ..|++|+.+++++...+.+|+||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~lv~ 76 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST----GDCPFIVCMTYAFHTPDKLCFIL 76 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh----CCCCcEeEEEEEEecCCeEEEEE
Confidence 4899999999999999999999999997532 112234455555555432 36899999999999999999999
Q ss_pred eccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc-c
Q 002401 192 ELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR-T 269 (927)
Q Consensus 192 Ey~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~-~ 269 (927)
||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||++..... .
T Consensus 77 e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~dfg~~~~~~~~~ 151 (279)
T cd05633 77 DLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKK 151 (279)
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEccCCcceeccccC
Confidence 9998 5777777654 3599999999999999999999999999999999999994 668899999999864432 2
Q ss_pred ceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 270 VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 270 ~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
.....++..|+|||.+.. ..++.++|||||||++|+|++|..||...
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 199 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence 233468999999999874 56899999999999999999999999654
No 206
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.5e-37 Score=373.93 Aligned_cols=256 Identities=28% Similarity=0.424 Sum_probs=205.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~- 184 (927)
++|+++++||+|+||+||+|++..+++.||+|++... ......+..|+.+|+.| .|+|||+++++|...
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-------~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-------KHKNIVRYIDRFLNKA 85 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-------CCCCcCeEEEEEEecC
Confidence 7999999999999999999999999999999999743 34456788899999999 589999999998654
Q ss_pred -ceeEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccC-------CeeeccCCCCCEEEeec----
Q 002401 185 -RHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDA-------GIIHCDLKPENILLCTS---- 249 (927)
Q Consensus 185 -~~l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~-------gIVHrDLKPeNILL~~~---- 249 (927)
..+||||||+. ++|.++|.... ...+++..++.|+.||+.||+|||+. +||||||||+||||+..
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 57999999998 58988887532 24699999999999999999999984 49999999999999632
Q ss_pred ----------CCCCeEEEeecCCccccccc--ceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 250 ----------VKPAEIKIIDFGSACTEDRT--VYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 250 ----------~~~g~IKL~DFGlA~~~~~~--~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
+....+||+|||++...... ....++|+.|+|||++.+. .++.++||||||||||||++|..||..
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 12346899999999754322 2345789999999999653 588999999999999999999999976
Q ss_pred CCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccc
Q 002401 316 ASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHH 395 (927)
Q Consensus 316 ~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~ 395 (927)
......+..++.. .+.
T Consensus 246 ~~~~~qli~~lk~---~p~------------------------------------------------------------- 261 (1021)
T PTZ00266 246 ANNFSQLISELKR---GPD------------------------------------------------------------- 261 (1021)
T ss_pred CCcHHHHHHHHhc---CCC-------------------------------------------------------------
Confidence 5543332221110 000
Q ss_pred cchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 396 KHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 396 ~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.|. ...+.++.+||.+||.+||++|||+.|+|.|+||...
T Consensus 262 ---------lpi------------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 262 ---------LPI------------KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred ---------CCc------------CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 000 0123468899999999999999999999999999864
No 207
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.1e-37 Score=335.09 Aligned_cols=253 Identities=25% Similarity=0.426 Sum_probs=205.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+.|.....||+|+||.||++.+..+++.||||++.... ...+.+.+|+.+++.+ +|+||+++++.+...+..
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~ii~~~~~~~~~~~~ 94 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-------HHENVVDMYNSYLVGDEL 94 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC-------CCCcHHHHHHheecCCeE
Confidence 56666788999999999999999999999999987533 3345677899988887 589999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+.+ +|.+++.. ..+++..++.++.||+.||+|||+++|+||||||+||+++ .++.+||+|||++...
T Consensus 95 ~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 95 WVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFCAQV 168 (292)
T ss_pred EEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccCcchhhc
Confidence 999999985 66666643 3589999999999999999999999999999999999994 5688999999998643
Q ss_pred cc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 267 DR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 267 ~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
.. ......++..|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..+...+. +.
T Consensus 169 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~~-------- 237 (292)
T cd06658 169 SKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP---PR-------- 237 (292)
T ss_pred ccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---Cc--------
Confidence 22 22345688999999999888999999999999999999999999987665444333322111 00
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
+......+
T Consensus 238 ------------------------------------------------------------------------~~~~~~~~ 245 (292)
T cd06658 238 ------------------------------------------------------------------------VKDSHKVS 245 (292)
T ss_pred ------------------------------------------------------------------------cccccccC
Confidence 00000123
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
..+.+||.+||..||++|||++|+|+||||...+
T Consensus 246 ~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~ 279 (292)
T cd06658 246 SVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG 279 (292)
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence 4678999999999999999999999999999764
No 208
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.1e-36 Score=321.18 Aligned_cols=204 Identities=21% Similarity=0.360 Sum_probs=176.9
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+|.+.++||+|+||.||+|.+..+++.||+|+++.+......+.+|+++++.+ .|+||+++++++..++.++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-------KHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC-------CCCChhheEEEEcCCCCcE
Confidence 579999999999999999999999999999999987665667788999999998 5899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.......+++..++.++.||++||+|||+++|+||||||+|||++ .++.+||+|||++....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT 155 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEeCCCccccccc
Confidence 9999997 6898888765555689999999999999999999999999999999999994 67889999999986543
Q ss_pred cccee----eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002401 268 RTVYS----YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL 322 (927)
Q Consensus 268 ~~~~~----~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l 322 (927)
..... ...+..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+..
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~ 215 (263)
T cd05052 156 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 215 (263)
T ss_pred cceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 32211 123457999999998899999999999999999998 99999876654443
No 209
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-37 Score=360.50 Aligned_cols=199 Identities=25% Similarity=0.343 Sum_probs=171.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEe-CChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE-Eeec--
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK-NQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY-FVCQ-- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik-~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~-f~~~-- 184 (927)
.+++|.+.|.+|+|+.||+|++...+..||+|.+- .++...+.+.+||.+|+.|. +|+|||.++|. ....
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~------gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS------GHKNIVSYIDSSAINRSS 110 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc------CCCceeeEeccccccccC
Confidence 68999999999999999999999988889998765 46677788899999999996 59999999993 2221
Q ss_pred ----ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCC--eeeccCCCCCEEEeecCCCCeEEE
Q 002401 185 ----RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIKI 257 (927)
Q Consensus 185 ----~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~g--IVHrDLKPeNILL~~~~~~g~IKL 257 (927)
-+++|+||||. |.|.|++.......|+|.+|++|++|+++|+++||... |||||||-|||||. .++.+||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KL 187 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKL 187 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEe
Confidence 36889999999 69999999777667999999999999999999999998 99999999999994 6789999
Q ss_pred eecCCcccccccc------------eeeccCCCCCCcchhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 258 IDFGSACTEDRTV------------YSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 258 ~DFGlA~~~~~~~------------~~~~gT~~Y~APEvl~---~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
||||.|+..-... .....|+.|||||++. +...+.|+|||+|||+||.||....||...
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s 261 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES 261 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence 9999996433222 1124588999999884 568999999999999999999999999643
No 210
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.8e-36 Score=316.31 Aligned_cols=201 Identities=30% Similarity=0.455 Sum_probs=171.5
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee--c
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC--Q 184 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~--~ 184 (927)
+|++++.||.|+||.||+|.+..+++.||+|+++.. ....+.+..|+++++.+ .|+||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-------KHPNIVRYYDRIIDRSN 73 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-------CCCccceeeeeeecCCC
Confidence 588999999999999999999999999999998743 33455677899999988 58999999998764 3
Q ss_pred ceeEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhc-----cCCeeeccCCCCCEEEeecCCCCeEE
Q 002401 185 RHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLK-----DAGIIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLH-----s~gIVHrDLKPeNILL~~~~~~g~IK 256 (927)
..+|+||||+. ++|.+++.... ...+++..++.++.||+.||+||| +.+|+|+||||+||+++ .++.+|
T Consensus 74 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~k 150 (265)
T cd08217 74 QTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVK 150 (265)
T ss_pred CEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEE
Confidence 56899999997 58888886542 346899999999999999999999 99999999999999995 568999
Q ss_pred EeecCCccccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 257 IIDFGSACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 257 L~DFGlA~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
|+|||++...... .....++..|+|||++....++.++|||||||++|+|++|+.||...+..+
T Consensus 151 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 217 (265)
T cd08217 151 LGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ 217 (265)
T ss_pred EecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH
Confidence 9999998754332 234567899999999998889999999999999999999999998766433
No 211
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1e-36 Score=323.50 Aligned_cols=197 Identities=29% Similarity=0.470 Sum_probs=172.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.+.||.|+||.||+|.+..+++.||+|++... ......+.+|+++++.+ .|+||+++++++...+.
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~~~ 73 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-------NSPYIVGFYGAFYNNGD 73 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-------CCCchhhhheeeecCCE
Confidence 3688889999999999999999999999999998764 34456678899999888 48999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
++||+||+. ++|.+++.... ..+++..+..++.||+.||+|||+ .+|+|+||||+||+++ .++.+||+|||.+.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~ 149 (265)
T cd06605 74 ISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSG 149 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccch
Confidence 999999999 68888887653 568999999999999999999999 9999999999999995 57889999999986
Q ss_pred ccccc-ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 265 TEDRT-VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 265 ~~~~~-~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
..... .....++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 150 QLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred hhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 43221 12256788899999999989999999999999999999999999654
No 212
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.9e-36 Score=327.83 Aligned_cols=208 Identities=26% Similarity=0.400 Sum_probs=170.2
Q ss_pred CCceEEEEEeccCCceeEEEeeccC----------------CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCC
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAE----------------MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDRE 169 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~----------------tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~ 169 (927)
.++|++.++||+|+||.||+|.+.. ++..||||+++.. ......+.+|+++|+++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------- 76 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL------- 76 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-------
Confidence 3689999999999999999997532 3457999999763 33455788999999988
Q ss_pred CCCceeEEEEEEeecceeEEEEeccc-chhHHHHHhhcc-----------------CCCCHHHHHHHHHHHHHHHhhhcc
Q 002401 170 DKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHF-----------------RGLSLSIVQLFSKQILRGLSLLKD 231 (927)
Q Consensus 170 ~HpnIVrl~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~-----------------~~L~e~~i~~i~~QIl~aL~yLHs 231 (927)
.|+||+++++++...+..||||||+. ++|.+++..... ..+++..+..++.||+.||+|||+
T Consensus 77 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 77 KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999997 588888765321 236778899999999999999999
Q ss_pred CCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHH
Q 002401 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAEL 306 (927)
Q Consensus 232 ~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyEL 306 (927)
++|+||||||+|||++ .++.+||+|||++....... ....++..|+|||++....++.++|||||||++|||
T Consensus 157 ~~ivH~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 233 (304)
T cd05096 157 LNFVHRDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233 (304)
T ss_pred CCccccCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 9999999999999994 66889999999986542221 122346789999999988999999999999999999
Q ss_pred Hh--CCCCCCCCCHHHHHHHH
Q 002401 307 FL--GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 307 lT--G~~PF~g~s~~d~l~~I 325 (927)
++ +..||...+..+.+..+
T Consensus 234 ~~~~~~~p~~~~~~~~~~~~~ 254 (304)
T cd05096 234 LMLCKEQPYGELTDEQVIENA 254 (304)
T ss_pred HHccCCCCCCcCCHHHHHHHH
Confidence 86 56788776655554443
No 213
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.8e-36 Score=318.16 Aligned_cols=202 Identities=27% Similarity=0.435 Sum_probs=175.4
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+|++.++||+|+||.||++++..+++.||+|.++.. ....+.+.+|+.+++.+ .|+||+++++++...+.+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~ 73 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-------KHPNIVAFKESFEADGHL 73 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-------CCCCcceEEEEEEECCEE
Confidence 588999999999999999999999999999998643 34456777899998888 589999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+. ++|.+++.......+++..++.++.||+.||.|||+++|+|+||||+||++ +.++.++|+|||++...
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~ 150 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLL 150 (255)
T ss_pred EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceee
Confidence 99999997 588888876555568999999999999999999999999999999999999 46788999999998644
Q ss_pred ccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~ 321 (927)
... .....++..|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus 151 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 208 (255)
T cd08219 151 TSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL 208 (255)
T ss_pred cccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence 322 2235678899999999988999999999999999999999999976654443
No 214
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-36 Score=325.45 Aligned_cols=191 Identities=29% Similarity=0.436 Sum_probs=164.3
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||+|+||+||+|.+..+++.||||++.... .....+.+|+++|+.+ .|+||+++++++...+.+|+|||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~~lv~e 73 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-------SSRFIVSLAYAFETKDDLCLVMT 73 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-------CCCCEeeeeeEEecCCeEEEEEe
Confidence 689999999999999999999999997432 2234556799999888 48999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc--c
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--T 269 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~--~ 269 (927)
|+. ++|.+++.......+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.+||+|||.+..... .
T Consensus 74 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~ 150 (277)
T cd05577 74 LMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGKK 150 (277)
T ss_pred cCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcchhhhccCCc
Confidence 998 5888888765545699999999999999999999999999999999999994 668899999999864332 2
Q ss_pred ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 270 VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 270 ~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
.....++..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 198 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK 198 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence 233456788999999988889999999999999999999999996544
No 215
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.5e-36 Score=329.04 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=207.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.++|++.++||+|+||.||++++..+++.||||++... ....+.+.+|+++++.+ .|+||++++++|..
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-------~h~niv~~~~~~~~ 86 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-------RHPNTIEYKGCYLR 86 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-------CCCCEEEEEEEEEe
Confidence 36899999999999999999999999999999998642 23345677899999988 58999999999999
Q ss_pred cceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 184 QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 184 ~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.+..||||||+.++|.+++.... ..+++..+..++.||+.||.|||+.+|+|+||+|+||+++ .++.+||+|||++
T Consensus 87 ~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~ 162 (307)
T cd06607 87 EHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSA 162 (307)
T ss_pred CCeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCCEEEeecCcc
Confidence 99999999999999888876543 4689999999999999999999999999999999999994 6688999999998
Q ss_pred ccccccceeeccCCCCCCcchhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 264 CTEDRTVYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 264 ~~~~~~~~~~~gT~~Y~APEvl~---~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
...... ....++..|+|||++. ...++.++|||||||++|||++|..||...+....+..+.. . .++.
T Consensus 163 ~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~--~-~~~~----- 233 (307)
T cd06607 163 SLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--N-DSPT----- 233 (307)
T ss_pred eecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc--C-CCCC-----
Confidence 654322 3446788999999985 34688999999999999999999999976654443322211 0 0000
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
+. ..
T Consensus 234 ----------------------------------------------------------------------~~------~~ 237 (307)
T cd06607 234 ----------------------------------------------------------------------LS------SN 237 (307)
T ss_pred ----------------------------------------------------------------------CC------ch
Confidence 00 00
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
..+..+++||.+||..||++|||+.+++.||||....
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred hhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 1234689999999999999999999999999998753
No 216
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=7.1e-36 Score=311.18 Aligned_cols=200 Identities=31% Similarity=0.525 Sum_probs=175.6
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh-hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~-~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
+|++.+.||+|++|.||++.+..+++.|++|++..... ....+.+|+++++.+ .|++|+++++++......+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~~ 73 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-------KHPNIVKYYGSYLKKDELW 73 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC-------CCCCEeEEEEEEecCCeEE
Confidence 47889999999999999999998999999999986543 556788899999988 4899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+|+||++ ++|.+++.... ..+++..+..++.||++||++||+++++|+||+|+||+++ .++.+||+|||.+....
T Consensus 74 l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~ 149 (253)
T cd05122 74 IVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLS 149 (253)
T ss_pred EEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccccccc
Confidence 9999999 68888876653 4699999999999999999999999999999999999995 57899999999997654
Q ss_pred cc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 268 RT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 268 ~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
.. .....++..|+|||.+....++.++||||||||+|+|++|..||...+..+
T Consensus 150 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 204 (253)
T cd05122 150 DTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK 204 (253)
T ss_pred ccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH
Confidence 43 245577889999999998889999999999999999999999997665433
No 217
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=341.61 Aligned_cols=320 Identities=23% Similarity=0.371 Sum_probs=250.9
Q ss_pred CCcccchhccchhhHhhhhhHHHHhhhcCCCccccc------ccCCCccc---CCCCccccCC--CccCCCCcceEeece
Q 002401 32 DAPSLRVVVRKPLVVRLTKDIVETYQICNPLFKYSE------ELNPKRYL---TSPSVGVLND--GYDNVNSDLILAVNL 100 (927)
Q Consensus 32 ~~~~L~~~~~~~~~~~Lt~~i~~~y~~~~p~~~~~~------~~~p~r~l---t~ps~~~~n~--g~d~~~~d~~i~~~~ 100 (927)
++++|.......+.+.|+++.-++|++-.+.-.... .++..+.- +.|....... ...+.. ..+
T Consensus 271 gisEl~K~p~~GWyKlLsqeEGEyyNvp~~~~~~e~~~~lr~k~~~~~~~~~~s~p~~~~~~~~~~~~~~~------~~d 344 (683)
T KOG0696|consen 271 GISELQKAPVDGWYKLLSQEEGEYYNVPVPDEDSEDNEELRQKFERARIGPGSSKPEKKTMPTDSKFHNSS------KRD 344 (683)
T ss_pred cHHHHhhcchhhHHHHhhhhcCceeccCCCCchhhHHHHHHHHHhhcccCCCcCCCCCCCCCCcccCCCCC------ccc
Confidence 789999999999999999999999986554332111 11111111 1111111111 111111 111
Q ss_pred eeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeE
Q 002401 101 VLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVR 176 (927)
Q Consensus 101 ~l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVr 176 (927)
.+ ...+|.++.+||+|+||+|.+|..+.+.+.+|||+++++ ....+..+.|-++|....+ -|.+++
T Consensus 345 ~i----~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~k------ppFL~q 414 (683)
T KOG0696|consen 345 RI----KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK------PPFLVQ 414 (683)
T ss_pred ce----eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCC------CchHHH
Confidence 11 125889999999999999999999999999999999974 3445556678787766543 478999
Q ss_pred EEEEEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeE
Q 002401 177 IYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI 255 (927)
Q Consensus 177 l~~~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~I 255 (927)
++.+|+.-+.+|+||||+.| +|.-.+++. +++.|..+..++.+|+-||-|||++|||.||||.+|||| +..+.|
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHi 489 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHI 489 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCce
Confidence 99999999999999999985 665555543 579999999999999999999999999999999999999 578999
Q ss_pred EEeecCCccc---ccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 002401 256 KIIDFGSACT---EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ 332 (927)
Q Consensus 256 KL~DFGlA~~---~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~ 332 (927)
||+|||+++. .+....+.|||+.|+|||++.-++|+..+|.||+||+||||+.|.+||.++++.++++.|.+.--
T Consensus 490 Ki~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-- 567 (683)
T KOG0696|consen 490 KIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-- 567 (683)
T ss_pred EeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC--
Confidence 9999999964 34566788999999999999999999999999999999999999999999999999988876321
Q ss_pred CChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCC
Q 002401 333 PPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLS 412 (927)
Q Consensus 333 PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls 412 (927)
.||
T Consensus 568 -----------------------------------------------------------------------syP------ 570 (683)
T KOG0696|consen 568 -----------------------------------------------------------------------SYP------ 570 (683)
T ss_pred -----------------------------------------------------------------------cCc------
Confidence 011
Q ss_pred hhhhhhhhhhHHHHHHHHHhccccCcCCCCCH-----HHHHhCCCcCCCCC
Q 002401 413 MEDISKESQIRLALVDFLKGLVEFDPAKRWSP-----FQASRHPFVTGEPF 458 (927)
Q Consensus 413 ~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA-----~EaLqHPwf~~~~~ 458 (927)
..++.++.++++.+|...|.+|+.+ .+|-.||||+...|
T Consensus 571 -------KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 571 -------KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred -------ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 1234578899999999999999865 68999999998665
No 218
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.2e-36 Score=322.69 Aligned_cols=198 Identities=27% Similarity=0.448 Sum_probs=169.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
++|++.++||.|++|.||+|.+..+++.||+|++.... .....+.+|+++++.+ +|+||++++++|...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC-------KSPYIVKYYGAFLDESS 73 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-------CCCCeeeeeeEEEccCC
Confidence 47899999999999999999999999999999998542 3456788899999888 589999999998654
Q ss_pred ceeEEEEeccc-chhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 185 RHLCICFELLD-SNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
+.+|+||||++ ++|.+++... ....+++..+..++.||+.||+|||+.+|+|+||+|+||+++ .++.+||+|||
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~dfg 150 (287)
T cd06621 74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFG 150 (287)
T ss_pred CeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeecc
Confidence 47899999997 5787776542 234589999999999999999999999999999999999994 56789999999
Q ss_pred Cccccccc-ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 262 SACTEDRT-VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 262 lA~~~~~~-~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
++...... .....++..|+|||.+.+..++.++||||||||+|+|++|..||...
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 151 VSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 98643322 22345688899999999889999999999999999999999999754
No 219
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.7e-36 Score=323.37 Aligned_cols=253 Identities=24% Similarity=0.421 Sum_probs=206.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
..|+++++||.|+||.||+|.+..+++.||||+++.. ......+.+|+++++.+ .|+||+++++++.....
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~ 76 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DSPYVTKYYGSYLKGTK 76 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEECCE
Confidence 4788899999999999999999999999999999854 23456677899988888 58999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+||||||+++ +|.+++.. ..+++..+..++.||+.||+|||+.+|+|+||+|+||+++ .++.++|+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~ 150 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQ 150 (277)
T ss_pred EEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEccccccee
Confidence 9999999974 88887764 3589999999999999999999999999999999999994 567899999999854
Q ss_pred ccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
... ......++..|+|||++.+..++.++|||||||++|||++|..||...........+.. + .++
T Consensus 151 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~-~~~-------- 219 (277)
T cd06640 151 LTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK--N-NPP-------- 219 (277)
T ss_pred ccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc--C-CCC--------
Confidence 332 12234578889999999988899999999999999999999999976543322211100 0 000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
. ....+
T Consensus 220 ------------------------------------------------------~--------------------~~~~~ 225 (277)
T cd06640 220 ------------------------------------------------------T--------------------LTGEF 225 (277)
T ss_pred ------------------------------------------------------C--------------------Cchhh
Confidence 0 00113
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
+..+.+||.+||+.||++|||++|+|+|+||....+.
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK 262 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence 3468899999999999999999999999999876543
No 220
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.4e-36 Score=318.19 Aligned_cols=197 Identities=29% Similarity=0.490 Sum_probs=168.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.+|++.++||+|+||.||++++..+++.||||++... ....+.+.+|+++++.+ .|+||+++++++.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~ 74 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-------LHERIVQYYGCLR 74 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-------CCCCeeeEEeEec
Confidence 4799999999999999999999999999999998632 12345677899999988 5899999999987
Q ss_pred ec--ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 183 CQ--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 183 ~~--~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
+. ..+++||||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|
T Consensus 75 ~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~D 149 (265)
T cd06652 75 DPMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGD 149 (265)
T ss_pred cCCCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECc
Confidence 64 56889999997 5888887654 3588999999999999999999999999999999999994 668899999
Q ss_pred cCCcccccc------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 260 FGSACTEDR------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 260 FGlA~~~~~------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
||++..... ......++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 213 (265)
T cd06652 150 FGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE 213 (265)
T ss_pred CccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc
Confidence 999864321 2233457889999999988889999999999999999999999997543
No 221
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-37 Score=328.77 Aligned_cols=286 Identities=33% Similarity=0.589 Sum_probs=229.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~- 184 (927)
.||.-++.++.|.- .|..|.|.-.++.||+|++... ....+++.+|..++..+ .|+||++++.+|.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-------~~~nii~l~n~ftP~~ 88 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-------NHKNIISLLNVFTPQK 88 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-------cccceeeeeeccCccc
Confidence 68999999999998 8889999999999999998642 23456778899999999 478999999999754
Q ss_pred -----ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 185 -----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 185 -----~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
...|+|||+|..+|.+++.. .++-+.++.|++|++.|++|||+.||+||||||+||++ ..++.+||.|
T Consensus 89 ~l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~d 161 (369)
T KOG0665|consen 89 TLEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILD 161 (369)
T ss_pred cHHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeecc
Confidence 36899999999999998873 37888999999999999999999999999999999999 5779999999
Q ss_pred cCCccccccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 260 FGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 260 FGlA~~~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
||+|+..+.. ...++.++.|+|||++.+..|...+||||+|||+.||++|+..|+|.+..++..+|++.+| .|.+..
T Consensus 162 fg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lg-tpd~~F 240 (369)
T KOG0665|consen 162 FGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLG-TPDPSF 240 (369)
T ss_pred chhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhc-CCCHHH
Confidence 9999876544 5567899999999999999999999999999999999999999999999999999999999 555554
Q ss_pred HHHhhhc-chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhh
Q 002401 338 LKEAKNT-SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI 416 (927)
Q Consensus 338 l~~~~~~-~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i 416 (927)
..+.... +.|+.. ...|+.. ++.++++..-+... .
T Consensus 241 ~~qL~~~~r~yv~~----------------~~~y~~~-----------------------~f~~~fpD~~f~~~-----~ 276 (369)
T KOG0665|consen 241 MKQLQPTVRNYVEN----------------RPQYQAI-----------------------SFSELFPDSLFPVV-----L 276 (369)
T ss_pred HHHhhHHHHHHhhc----------------ChHhhcc-----------------------chhhhCCccccccc-----c
Confidence 4433222 222221 1122221 22222221111111 1
Q ss_pred hhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcC
Q 002401 417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVT 454 (927)
Q Consensus 417 ~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~ 454 (927)
..+......++||+.+||.+||++|+++++||+||||+
T Consensus 277 e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 277 EGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred cCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 11122345789999999999999999999999999998
No 222
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.6e-36 Score=317.30 Aligned_cols=202 Identities=27% Similarity=0.399 Sum_probs=172.7
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|.+.+.||+|+||.||++.+..++..||+|.+... ....+.+.+|+++++.+ .|+||+++++.+.....
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-------~h~~i~~~~~~~~~~~~ 73 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-------KHPNIVTFFASFQENGR 73 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-------CCCChhhhhheeccCCe
Confidence 588999999999999999999999999999999753 23345677899999988 48999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+|+||+. ++|.+++.......+++..++.++.||++||+|||+++|+|+||||+||+++ .....+||+|||.+..
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~--~~~~~~~l~d~~~~~~ 151 (257)
T cd08225 74 LFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS--KNGMVAKLGDFGIARQ 151 (257)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc--CCCCeEEecccccchh
Confidence 999999997 5888888765544589999999999999999999999999999999999995 2334679999999865
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
.... .....++..|+|||++....++.++|||||||++|||++|..||...+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 209 (257)
T cd08225 152 LNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ 209 (257)
T ss_pred ccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 4332 123457888999999988889999999999999999999999997655443
No 223
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.9e-36 Score=320.35 Aligned_cols=197 Identities=28% Similarity=0.527 Sum_probs=167.3
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-----------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-----------AYYQQALVEVSILTTLNKKYDREDKHHIVRIY 178 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-----------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~ 178 (927)
+|.+.+.||.|+||.||+|.+..+++.||||.++... ...+.+..|+.+++.+ +|+||++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~ 74 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-------DHLNIVQYL 74 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-------CCCCcceEE
Confidence 6889999999999999999999999999999986321 1223466788888887 589999999
Q ss_pred EEEeecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEE
Q 002401 179 EYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257 (927)
Q Consensus 179 ~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL 257 (927)
+++...+.+++||||+. ++|.+++... ..+++..++.++.||+.||.|||+++++|+||||+||+++ .++.+||
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l 149 (272)
T cd06629 75 GFETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKI 149 (272)
T ss_pred EEeccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEE
Confidence 99999999999999997 5888887665 4689999999999999999999999999999999999994 6789999
Q ss_pred eecCCccccccc-----ceeeccCCCCCCcchhcCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 258 IDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQ--YTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 258 ~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~--ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
+|||++...... .....++..|+|||++.... ++.++|||||||++|+|++|..||.....
T Consensus 150 ~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 217 (272)
T cd06629 150 SDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA 217 (272)
T ss_pred eeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch
Confidence 999998653321 22345788899999998754 88999999999999999999999965443
No 224
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.6e-36 Score=321.65 Aligned_cols=196 Identities=28% Similarity=0.434 Sum_probs=172.4
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+|++.+.||.|+||.||+|++..+++.||+|++.+.. ...+.+.+|+++++++ +||||+++++++....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~ 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-------NHPFLVNLWYSFQDEE 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-------CCCChHHHHHhhcCCC
Confidence 5899999999999999999999999999999997532 3456788899999888 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|+||||+. ++|.+.+... ..+++..++.++.||++||.|||+++|+|+||||+||+++ .++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~ 148 (258)
T cd05578 74 NMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIAT 148 (258)
T ss_pred eEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeeccccc
Confidence 9999999997 4788887665 4699999999999999999999999999999999999994 66889999999986
Q ss_pred ccccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 265 TEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 265 ~~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
..... .....++..|+|||++....++.++|||||||++|+|++|..||...+
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 149 KVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred ccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 54332 234567888999999998889999999999999999999999997655
No 225
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5e-36 Score=320.85 Aligned_cols=206 Identities=19% Similarity=0.304 Sum_probs=170.9
Q ss_pred CceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~---~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
++|++.++||+|+||.||+|++. ..+..||+|+++... .....+.+|+.+++.+ .|+||+++++++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~ 77 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-------DHSNIVRLEGVITR 77 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-------CCCCcCeEEEEEec
Confidence 68999999999999999999754 456789999998642 3345677899988887 58999999999999
Q ss_pred cceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+.+||||||+++ +|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||.
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~ 153 (266)
T cd05064 78 GNTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRR 153 (266)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCcc
Confidence 9999999999985 6777776543 4689999999999999999999999999999999999994 668899999998
Q ss_pred cccccccc----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 263 ACTEDRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 263 A~~~~~~~----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
+....... ....++..|+|||++.+..++.++|||||||++|||++ |..||...+..+.+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~ 221 (266)
T cd05064 154 LQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV 221 (266)
T ss_pred cccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 75432111 11234567999999999999999999999999999875 99999877665554443
No 226
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.2e-36 Score=319.36 Aligned_cols=197 Identities=28% Similarity=0.491 Sum_probs=167.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
..|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|+.+++.+ +|+||+++++++.
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~ 74 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-------QHERIVQYYGCLR 74 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-------CCCCeeeEEEEEE
Confidence 3688999999999999999999999999999998643 12345677899999988 5899999999987
Q ss_pred ec--ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 183 CQ--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 183 ~~--~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
.. ..+++||||+. ++|.+++.... .+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|
T Consensus 75 ~~~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~l~d 149 (266)
T cd06651 75 DRAEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVKLGD 149 (266)
T ss_pred cCCCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEcc
Confidence 53 57899999997 57888886543 589999999999999999999999999999999999994 667899999
Q ss_pred cCCcccccc------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 260 FGSACTEDR------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 260 FGlA~~~~~------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
||++..... ......++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~ 213 (266)
T cd06651 150 FGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE 213 (266)
T ss_pred CCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc
Confidence 999864321 1123457888999999998889999999999999999999999997543
No 227
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=371.82 Aligned_cols=304 Identities=23% Similarity=0.346 Sum_probs=237.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.++|.|+++||+|+||.|.+++.+.+++.||+|++++- ......|..|-.||..- +.+-|++++-.|++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-------ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-------NSEWIVQLHYAFQD 146 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-------CcHHHHHHHHHhcC
Confidence 37999999999999999999999999999999999862 33445566777777655 45679999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
+.++|+|||||. |+|..++.... .+++..++.++..|+.||.-||+.|+|||||||+|||| +..|+|||+|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchh
Confidence 999999999997 68999988765 79999999999999999999999999999999999999 5889999999999
Q ss_pred ccccccc----ceeeccCCCCCCcchhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 263 ACTEDRT----VYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 263 A~~~~~~----~~~~~gT~~Y~APEvl~~-----~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
|...+.. ....+|||-|++||++.. ..|+..+|.||+||++|||+.|..||..++-.+.+.+|+..-.
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~--- 298 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKE--- 298 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhh---
Confidence 9655422 234589999999999963 3689999999999999999999999998887777777764311
Q ss_pred ChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCCh
Q 002401 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSM 413 (927)
Q Consensus 334 P~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~ 413 (927)
++ .||
T Consensus 299 ----------------~l----------------------------------------------------~FP------- 303 (1317)
T KOG0612|consen 299 ----------------SL----------------------------------------------------SFP------- 303 (1317)
T ss_pred ----------------hc----------------------------------------------------CCC-------
Confidence 00 011
Q ss_pred hhhhhhhhhHHHHHHHHHhccccCcCCCCC---HHHHHhCCCcCCCCCC------CCCCCCCCCCCCCccCCccccC-CC
Q 002401 414 EDISKESQIRLALVDFLKGLVEFDPAKRWS---PFQASRHPFVTGEPFT------CPYQPPPETPRVPVAQNFKVDH-HP 483 (927)
Q Consensus 414 e~i~~e~~~s~~l~DLI~kML~~DP~kRpT---A~EaLqHPwf~~~~~~------~~~~~~p~~p~~p~~~~~~~~~-~p 483 (927)
.+..++++++|||+++|. +|+.|+. ++++.+||||.+..|. .|+.|-...+.-+..+....+. .+
T Consensus 304 ----~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPevssd~DTsnFd~~~dd~~~ 378 (1317)
T KOG0612|consen 304 ----DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVSSDDDTSNFDVDEDDLRD 378 (1317)
T ss_pred ----cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcCCCCCccccccccccccch
Confidence 112356789999999876 8999999 9999999999998873 2333333332222222221111 11
Q ss_pred C--CCccccccCCCCcccCCCCCCC
Q 002401 484 G--AGHWFAAGLSPNVVPYGYGNSY 506 (927)
Q Consensus 484 ~--~gh~~~a~lsp~~~p~~~~~~~ 506 (927)
. ......++.+.+-+||-..+.+
T Consensus 379 ~e~~p~~~~~~f~Gn~LPFIGfTy~ 403 (1317)
T KOG0612|consen 379 AETFPPRIPKAFSGNHLPFIGFTYT 403 (1317)
T ss_pred hhccCCCCCCCCcCCcCCeeeeeec
Confidence 1 2234567888888999876555
No 228
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.8e-36 Score=318.70 Aligned_cols=189 Identities=26% Similarity=0.453 Sum_probs=165.8
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||.|+||.||+|++..+++.||||++.... ...+.+.+|+++++.+ +|+||+++++++.....+|+|||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~lv~e 73 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-------NHPFIVKLYRTFKDKKYIYMLME 73 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-------CCCCEeeeeeeEEcCCccEEEEe
Confidence 789999999999999999999999997532 3445678899998888 58999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccccc--
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT-- 269 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~-- 269 (927)
|+. ++|.+++.... .+++..++.++.||+.||+|||+++++|+||||+||+++ .++.+||+|||++......
T Consensus 74 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~~ 148 (262)
T cd05572 74 YCLGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQK 148 (262)
T ss_pred cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCcccc
Confidence 997 68988887653 589999999999999999999999999999999999994 5688999999999755432
Q ss_pred ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 270 VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 270 ~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
.....++..|+|||.+....++.++|||||||++|+|++|..||....
T Consensus 149 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 149 TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 234567889999999988889999999999999999999999997655
No 229
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=340.84 Aligned_cols=276 Identities=25% Similarity=0.355 Sum_probs=224.5
Q ss_pred ccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 106 ~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
.+.+.|+.-++||+|+||.||-|+.+.||+.+|+|++.++ +.....+++|.+||.+++ .+.||.+--.|
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-------s~FiVslaYAf 254 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-------SPFIVSLAYAF 254 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-------cCcEEEEeeee
Confidence 3457899999999999999999999999999999998653 233456788999999994 56899999999
Q ss_pred eecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 182 VCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 182 ~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
+..+.+||||..|.| +|.-.|.+.....+++..++.++.+|+.||++||+.+||.|||||+|||+ ++.|+|+|+|+
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDL 331 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDL 331 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeecc
Confidence 999999999999985 66544544444579999999999999999999999999999999999999 58899999999
Q ss_pred CCcccc--cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 261 GSACTE--DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 261 GlA~~~--~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
|+|+.. .......+||..|||||++.+..|+...|.|+|||+||||+.|+.||....+....+++-+..-
T Consensus 332 GLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~-------- 403 (591)
T KOG0986|consen 332 GLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL-------- 403 (591)
T ss_pred ceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh--------
Confidence 999864 3455566999999999999999999999999999999999999999965443332222221110
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
. +.+..
T Consensus 404 -----------------------------------------------------------------~---------~~~ey 409 (591)
T KOG0986|consen 404 -----------------------------------------------------------------E---------DPEEY 409 (591)
T ss_pred -----------------------------------------------------------------c---------chhhc
Confidence 0 01111
Q ss_pred hhhhHHHHHHHHHhccccCcCCCC-----CHHHHHhCCCcCCCCCCCCCCCCCCCCCCCc
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPFTCPYQPPPETPRVPV 473 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRp-----TA~EaLqHPwf~~~~~~~~~~~~p~~p~~p~ 473 (927)
....++++++|++.+|..||++|+ .++++.+||||++.+|..-+.-..++|.+|-
T Consensus 410 ~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPd 469 (591)
T KOG0986|consen 410 SDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPD 469 (591)
T ss_pred ccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCC
Confidence 234667899999999999999998 5679999999999888766555555555553
No 230
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=2.3e-37 Score=317.02 Aligned_cols=288 Identities=23% Similarity=0.444 Sum_probs=219.5
Q ss_pred cccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 105 AETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 105 ~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
...+++|++++++|.|.|+.|+.+.+..+++.++||+++- ...+.+.+|++||+.|. +++||++++++..+.
T Consensus 34 wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--VkkkKIkREikIL~nL~------gg~NIi~L~DiV~Dp 105 (338)
T KOG0668|consen 34 WGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--VKKKKIKREIKILQNLR------GGPNIIKLLDIVKDP 105 (338)
T ss_pred ccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech--HHHHHHHHHHHHHHhcc------CCCCeeehhhhhcCc
Confidence 3456899999999999999999999999999999999983 34567889999999995 599999999999865
Q ss_pred --ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 185 --RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 185 --~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
....|||||+...-+..+- ..++...++.++.+|+.||.|||+.||+|||+||.|++++ .....++|+|+|+
T Consensus 106 ~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGL 179 (338)
T KOG0668|consen 106 ESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGL 179 (338)
T ss_pred cccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecch
Confidence 4688999999854333332 2478889999999999999999999999999999999996 4567899999999
Q ss_pred ccccc--ccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 263 ACTED--RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGL-PLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 263 A~~~~--~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~-~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
|.... ..-.-.+.+++|.-||++... .|+..-|||||||+|+.|+..+ +.|.|.++.|++.+|.+++| .+++.
T Consensus 180 AEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLG---t~el~ 256 (338)
T KOG0668|consen 180 AEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLG---TDELY 256 (338)
T ss_pred HhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhC---hHHHH
Confidence 97543 233345678999999999876 6999999999999999999975 55588999999999999999 23322
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
.. ..+- ++.-..+++.... .+..+.|...+.. + .
T Consensus 257 ~Y-------l~KY-------------------~i~Ldp~~~~i~~--------~~~rk~w~~Fi~~---------~---n 290 (338)
T KOG0668|consen 257 AY-------LNKY-------------------QIDLDPQFEDILG--------RHSRKPWSRFINS---------E---N 290 (338)
T ss_pred HH-------HHHH-------------------ccCCChhHhhHhh--------ccccccHHHhCCc---------c---c
Confidence 21 1111 1100001110000 0011112222111 1 0
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
.-..+++++|||.++|.+|-.+|+||.||+.||||..
T Consensus 291 ~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 291 QHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred cccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 1123478999999999999999999999999999974
No 231
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.2e-36 Score=326.08 Aligned_cols=259 Identities=25% Similarity=0.365 Sum_probs=201.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|+..+.||+|+||.||++++..+++.||||++... ......+.+|+.++.++. +|+||+++++++..++.
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~------~~~~iv~~~~~~~~~~~ 77 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS------DCPYIVKFYGALFREGD 77 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc------CCCCEeeeeeEEecCCc
Confidence 4667778999999999999999999999999998753 233456778888888873 38999999999999999
Q ss_pred eEEEEecccchhHHHHH---hhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 187 LCICFELLDSNLYELIK---INHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~---~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.++||||+..++.++.. ......+++..+..++.||+.||+|||+ .+|+||||||+|||++ ..+.+||+|||+
T Consensus 78 ~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~ 154 (288)
T cd06616 78 CWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGI 154 (288)
T ss_pred EEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEeecch
Confidence 99999999876555432 2233569999999999999999999997 5999999999999994 568899999999
Q ss_pred cccccc--cceeeccCCCCCCcchhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 263 ACTEDR--TVYSYIQSRYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 263 A~~~~~--~~~~~~gT~~Y~APEvl~~~---~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
+..... ......++..|+|||++... .++.++|||||||++|+|++|+.||.... .....+.+.....++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~- 231 (288)
T cd06616 155 SGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPIL- 231 (288)
T ss_pred hHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCcC-
Confidence 864322 22334678899999999876 68999999999999999999999996543 12222222111000000
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
+ ..
T Consensus 232 --------------------------------------------------------------------~------~~--- 234 (288)
T cd06616 232 --------------------------------------------------------------------S------NS--- 234 (288)
T ss_pred --------------------------------------------------------------------C------Cc---
Confidence 0 00
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
....++.++.+||++||..||++|||++|+++||||...
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 235 EEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred CCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 001234578999999999999999999999999999864
No 232
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.7e-36 Score=321.66 Aligned_cols=193 Identities=24% Similarity=0.382 Sum_probs=161.7
Q ss_pred CceEEEEEe--ccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLL--GHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~L--G~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.+.+ |+|+||.||+++++.+++.+|+|+++..... ..|+.+...+. +|+||++++++|...+.
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~~------~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLMK------DNPNFIKLYYSVTTLKG 83 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHhh------cCCCEEEEEEEEecCCe
Confidence 466666665 9999999999999999999999999754211 11333333222 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC-eEEEeecCCcc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g-~IKL~DFGlA~ 264 (927)
+|+||||+. ++|.+++.... .+++..++.++.||++||.|||+.+|+||||||+||+++ ..+ .++|+|||++.
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD---RAKDRIYLCDYGLCK 158 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe---CCCCeEEEecCccce
Confidence 999999997 69999887653 699999999999999999999999999999999999995 344 89999999986
Q ss_pred cccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
..... ....++..|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 159 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~ 210 (267)
T PHA03390 159 IIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE 210 (267)
T ss_pred ecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 55432 23467889999999998899999999999999999999999997543
No 233
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.9e-36 Score=320.82 Aligned_cols=208 Identities=25% Similarity=0.410 Sum_probs=173.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccC-----CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAE-----MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~-----tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
.++|++.+.||+|+||.||+|.+.. +...||+|.++.. ......+.+|+.+++.+ +|+||++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~ 77 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-------NHQNIVRLIGV 77 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEE
Confidence 3689999999999999999999877 7788999998743 23345678899999888 58999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCe
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINHF-----RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAE 254 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~~-----~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~ 254 (927)
+...+..++||||+. ++|.+++..... ..+++..++.++.||+.||+|||+++|+|+||||+|||++.+.....
T Consensus 78 ~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 78 SFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred EccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcc
Confidence 999999999999996 689888876532 24899999999999999999999999999999999999975444567
Q ss_pred EEEeecCCcccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002401 255 IKIIDFGSACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL 322 (927)
Q Consensus 255 IKL~DFGlA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l 322 (927)
+||+|||++........ ....+..|+|||++.+..++.++||||||||+|||++ |..||...+..+..
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~ 231 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM 231 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999975432211 1122457999999998899999999999999999997 99999876655443
No 234
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6.4e-36 Score=315.12 Aligned_cols=196 Identities=31% Similarity=0.487 Sum_probs=169.8
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
+|++.+.||+|+||+||+|.+..+++.||||++.... ...+.+.+|+++++.+ +|+||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~ 73 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-------QHPNIVQYLGTERE 73 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-------CCCCchheeeeEec
Confidence 5778899999999999999999899999999986532 3456788899999888 58999999999999
Q ss_pred cceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
...+|+||||+.+ +|.+++... ..+++..++.++.||+.||+|||+.+|+|+||||+||+++ .++.+||+|||+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~ 148 (258)
T cd06632 74 EDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGM 148 (258)
T ss_pred CCeEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCcc
Confidence 9999999999974 888887654 3589999999999999999999999999999999999994 668999999999
Q ss_pred ccccccc--ceeeccCCCCCCcchhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 263 ACTEDRT--VYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 263 A~~~~~~--~~~~~gT~~Y~APEvl~~~~-ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
+...... .....++..|+|||.+.... ++.++|||||||++|+|++|+.||....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 149 AKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred ceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 8653322 23456788899999998776 8999999999999999999999996554
No 235
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.1e-36 Score=322.44 Aligned_cols=192 Identities=26% Similarity=0.430 Sum_probs=159.2
Q ss_pred EeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
+||+|+||.||+|++..+++.||||++.... ........|..+++.++. .+|++|+++++++...+.+|+||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~v~ 76 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST----GDCPFIVCMSYAFHTPDKLSFIL 76 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh----CCCCcEeeeeeeeecCCEEEEEE
Confidence 4899999999999999999999999987532 112234455555555543 36899999999999999999999
Q ss_pred ecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc-cc
Q 002401 192 ELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED-RT 269 (927)
Q Consensus 192 Ey~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~-~~ 269 (927)
||+.+ +|.+++... ..+++..++.++.||+.||+|||+.+|+||||||+||+++ .++.+||+|||++.... ..
T Consensus 77 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~~ 151 (278)
T cd05606 77 DLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKK 151 (278)
T ss_pred ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCccC
Confidence 99984 677766543 4699999999999999999999999999999999999994 66789999999986432 22
Q ss_pred ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 270 VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 270 ~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 2345789999999999754 6899999999999999999999999764
No 236
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.2e-36 Score=316.72 Aligned_cols=206 Identities=27% Similarity=0.406 Sum_probs=176.1
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.++|+++++||+|+||.||+|.+. ++..||+|.++......+.+.+|+.+++.+ +|+||+++++++...+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTL-------QHDKLVRLYAVVTKEEPI 76 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhC-------CCCCeeeEEEEEcCCCCc
Confidence 378999999999999999999864 456799999886655567888999999998 589999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
++||||+. ++|.+++.......+++..++.++.||+.||+|||+++++||||||+||+++ .++.+||+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVI 153 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCccceec
Confidence 99999997 6999988776556789999999999999999999999999999999999994 6688999999999754
Q ss_pred cccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 267 DRTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 267 ~~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
..... ...++..|+|||++....++.++|||||||++|+|++ |..||......+....
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 216 (261)
T cd05072 154 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA 216 (261)
T ss_pred CCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH
Confidence 43221 1234567999999988889999999999999999998 9999987665554443
No 237
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.4e-36 Score=315.79 Aligned_cols=195 Identities=31% Similarity=0.498 Sum_probs=170.1
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh---hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA---YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~---~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.+.||+|+||.||++.+..+++.||||+++.... ..+.+.+|+.+++.+ .|+||+++++++...+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-------~~~~i~~~~~~~~~~~~ 73 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-------KHPNLVKYYGVEVHREK 73 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-------CCCChhheeeeEecCCE
Confidence 68999999999999999999999999999999986533 567788999999988 48999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+++|+||+. ++|.+++... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ ..+.+||+|||++..
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~ 148 (264)
T cd06626 74 VYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVK 148 (264)
T ss_pred EEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccc
Confidence 999999998 5788887654 3488999999999999999999999999999999999995 578899999999865
Q ss_pred ccccc-------eeeccCCCCCCcchhcCCC---CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 266 EDRTV-------YSYIQSRYYRSPEVLLGYQ---YTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 266 ~~~~~-------~~~~gT~~Y~APEvl~~~~---ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
..... ....++..|+|||++.+.. ++.++|||||||++|+|++|+.||...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 149 LKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred cCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 43221 1245678899999998766 889999999999999999999999654
No 238
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.7e-36 Score=329.40 Aligned_cols=254 Identities=24% Similarity=0.439 Sum_probs=204.4
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.|.....||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++.+ +|+||++++++|...+.+|
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-------~hp~i~~~~~~~~~~~~~~ 94 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-------QHQNVVEMYKSYLVGEELW 94 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC-------CCCchhhhhhheeeCCeEE
Confidence 444556799999999999999999999999998743 23345677888888887 5899999999999999999
Q ss_pred EEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+++ +|.+++.. ..+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||++....
T Consensus 95 iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 95 VLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQIS 168 (297)
T ss_pred EEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEeechhHhhcc
Confidence 99999985 67666544 3589999999999999999999999999999999999994 66899999999986432
Q ss_pred c---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhc
Q 002401 268 R---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNT 344 (927)
Q Consensus 268 ~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~ 344 (927)
. ......++..|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..+.. .++..
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~~-------- 236 (297)
T cd06659 169 KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD----SPPPK-------- 236 (297)
T ss_pred cccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----cCCCC--------
Confidence 2 22345688999999999988999999999999999999999999977665444333211 00000
Q ss_pred chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHH
Q 002401 345 SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRL 424 (927)
Q Consensus 345 ~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~ 424 (927)
+ .....++.
T Consensus 237 ------------------------------------------------~-----------------------~~~~~~~~ 245 (297)
T cd06659 237 ------------------------------------------------L-----------------------KNAHKISP 245 (297)
T ss_pred ------------------------------------------------c-----------------------cccCCCCH
Confidence 0 00001234
Q ss_pred HHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 425 ALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 425 ~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
.+.+||++||+.||++|||++|+++||||.+..++
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~ 280 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLDHPFLLQTGLP 280 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence 68899999999999999999999999999987653
No 239
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.2e-36 Score=327.90 Aligned_cols=255 Identities=22% Similarity=0.396 Sum_probs=206.1
Q ss_pred cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
..++|++.+.||+|+||.||++.+..+++.||+|++... ....+.+.+|+.+++.+ .|+||++++++|...+
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-------~hp~i~~~~~~~~~~~ 89 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN-------KHPNIVNYLDSYLVGD 89 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc-------CCCCeeehhheeeeCC
Confidence 347999999999999999999999889999999998643 33345678899888887 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
..|+|+||+. ++|.+++... .+++..+..++.||+.||.|||+++|+|+||||+||+++ .++.+||+|||++.
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~ 163 (293)
T cd06647 90 ELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCA 163 (293)
T ss_pred cEEEEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCccee
Confidence 9999999997 5888887653 488999999999999999999999999999999999994 56789999999885
Q ss_pred cccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... ......++..|+|||.+....++.++|||||||++|+|++|+.||...+..+.+..+.. +..+
T Consensus 164 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~--~~~~-------- 233 (293)
T cd06647 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NGTP-------- 233 (293)
T ss_pred cccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc--CCCC--------
Confidence 4322 12234678889999999888899999999999999999999999976554332211100 0000
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.+ + ....
T Consensus 234 --------------------------------------------------~~------------~-----------~~~~ 240 (293)
T cd06647 234 --------------------------------------------------EL------------Q-----------NPEK 240 (293)
T ss_pred --------------------------------------------------CC------------C-----------Cccc
Confidence 00 0 0011
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
++..+.+||++||..||++||++.|++.|+||+...
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 234688999999999999999999999999998754
No 240
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-35 Score=315.32 Aligned_cols=205 Identities=23% Similarity=0.371 Sum_probs=173.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|++.+.||+|+||.||++..+. +..+|+|.++........+.+|+++|+++ +|+||+++++++...+.+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~ 75 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKL-------SHPKLVQLYGVCTQQKPLY 75 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHC-------CCCCceeEEEEEccCCCEE
Confidence 579999999999999999997654 45799999886655556788899999998 5899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||.+....
T Consensus 76 iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 76 IVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVL 151 (256)
T ss_pred EEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCccccC
Confidence 9999997 68888876543 3589999999999999999999999999999999999994 66889999999986543
Q ss_pred ccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 268 RTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 268 ~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
.... ...++..|+|||++.+..++.++|||||||++|||++ |+.||...+..+.+..+
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i 214 (256)
T cd05114 152 DDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI 214 (256)
T ss_pred CCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 2111 1233557999999998899999999999999999999 89999877665555544
No 241
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=7.3e-36 Score=316.92 Aligned_cols=197 Identities=25% Similarity=0.470 Sum_probs=162.2
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChhh----HHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY----YQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~----~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
+.||+|+||.||+|.+..+++.||||++++.... ......|..++... .+|+||+++++++...+.+|+|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~------~~~~~i~~~~~~~~~~~~~~lv 75 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQ------GESPYVAKLYYSFQSKDYLYLV 75 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhc------CCCCCeeeeeeeEEcCCeEEEE
Confidence 5799999999999999999999999999754221 12233343333322 2689999999999999999999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccccc
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~ 269 (927)
|||+. ++|.+++... ..+++..+..++.||+.||.|||+.+|+|+||+|+||+++ .++.+||+|||++.....
T Consensus 76 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~- 149 (260)
T cd05611 76 MEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLE- 149 (260)
T ss_pred EeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccceeccc-
Confidence 99997 5888887654 3689999999999999999999999999999999999994 568899999999865433
Q ss_pred ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 002401 270 VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLR 323 (927)
Q Consensus 270 ~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~ 323 (927)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||...+..+...
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 203 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFD 203 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 223467888999999998889999999999999999999999998766544433
No 242
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.3e-35 Score=313.91 Aligned_cols=196 Identities=30% Similarity=0.469 Sum_probs=173.6
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+|++.+.||+|++|.||+|++..+++.||||++.... .....+.+|++++..+ .|+||+++++++...+.+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~ 74 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-------ESPYVVKCYGAFYKEGEI 74 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-------CCCCeeeEEEEEccCCeE
Confidence 6889999999999999999999999999999998653 3466788899999988 489999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
++||||+. ++|.+++... ..+++..++.++.||++||+|||+ .+++|+||+|+||+++ .++.++|+|||++..
T Consensus 75 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~~~~ 149 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKIADFGISKV 149 (264)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEEccCcccee
Confidence 99999998 6898888765 469999999999999999999999 9999999999999994 678999999999865
Q ss_pred ccccc---eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 266 EDRTV---YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 266 ~~~~~---~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
..... ....++..|+|||.+....++.++|||||||++|+|++|..||....
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 150 LENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred cccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 43222 23467889999999998899999999999999999999999997653
No 243
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.6e-36 Score=322.55 Aligned_cols=253 Identities=25% Similarity=0.431 Sum_probs=205.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
..|...++||+|++|.||++.+..+++.||||+++... ...+.+.+|+.+++.+ +|+||+++++++...++.
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-------~h~~vv~~~~~~~~~~~~ 91 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-------QHPNIVEMYSSYLVGDEL 91 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc-------CCCChheEEEEEEcCCeE
Confidence 45666789999999999999999999999999987543 3345577899998888 589999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+|+||+. ++|.+++.. ..+++..++.++.||+.||+|||+++|+||||||+||+++ .++.+||+|||++...
T Consensus 92 ~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFGFCAQV 165 (285)
T ss_pred EEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEcccccchhh
Confidence 99999997 588887765 3589999999999999999999999999999999999994 6689999999987543
Q ss_pred ccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhh
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~ 343 (927)
... .....++..|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..+... .++.
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~---~~~~-------- 234 (285)
T cd06648 166 SKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN---LPPK-------- 234 (285)
T ss_pred ccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc---CCCC--------
Confidence 221 22346788999999999888999999999999999999999999766554443332221 0000
Q ss_pred cchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhH
Q 002401 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (927)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s 423 (927)
. .....++
T Consensus 235 --------------------------------------------~----------------------------~~~~~~~ 242 (285)
T cd06648 235 --------------------------------------------L----------------------------KNLHKVS 242 (285)
T ss_pred --------------------------------------------C----------------------------cccccCC
Confidence 0 0000123
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 424 ~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
..+.+||++||..||++|||+.|+|+||||+..+
T Consensus 243 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 243 PRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 4789999999999999999999999999998753
No 244
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.4e-36 Score=321.30 Aligned_cols=206 Identities=28% Similarity=0.388 Sum_probs=173.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCC-----eEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMN-----SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg-----~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
.+|++.+.||+|+||.||+|.+...+ ..||+|+++.. ......+.+|+++++.+ .|+||+++++++
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-------~h~~i~~~~~~~ 77 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-------QHPNIVCLLGVC 77 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-------CCcccceEEEEE
Confidence 58999999999999999999876554 68999999753 33455678899999888 589999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEE
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINHF--------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILL 246 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~~--------------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL 246 (927)
...+..|+||||+. ++|.+++..... ..+++..++.++.||+.||+|||+++|+|+||||+|||+
T Consensus 78 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~ 157 (283)
T cd05048 78 TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV 157 (283)
T ss_pred cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE
Confidence 99999999999997 689888876421 458899999999999999999999999999999999999
Q ss_pred eecCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 247 CTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 247 ~~~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
+ +++.+||+|||++...... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus 158 ~---~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05048 158 G---EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE 234 (283)
T ss_pred c---CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 4 5688999999998643221 122345778999999998899999999999999999998 999998776655
Q ss_pred HHHH
Q 002401 321 LLRR 324 (927)
Q Consensus 321 ~l~~ 324 (927)
....
T Consensus 235 ~~~~ 238 (283)
T cd05048 235 VIEM 238 (283)
T ss_pred HHHH
Confidence 4443
No 245
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.1e-36 Score=321.87 Aligned_cols=198 Identities=28% Similarity=0.452 Sum_probs=171.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|+++++||+|+||+||++++..+++.||+|++... ....+.+.+|+++++.+ +|+||+++++++...+.
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~ 77 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-------RSPYIVSFYGAFLNENN 77 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-------CCCCcceEeeeEecCCE
Confidence 6899999999999999999999999999999998753 34456788899999988 58999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
+||||||+.+ +|.+++... +.+++..++.++.||+.+|.|||+ .+|+|+||||+||+++ .++.++|+|||++.
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl~~ 152 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIKLCDFGVSG 152 (284)
T ss_pred EEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEEEccCCccc
Confidence 9999999985 677776553 468999999999999999999997 6999999999999994 66889999999986
Q ss_pred ccc-ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 265 TED-RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 265 ~~~-~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
... .......++..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 153 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~ 207 (284)
T cd06620 153 ELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNI 207 (284)
T ss_pred chhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccch
Confidence 432 222345688999999999888999999999999999999999999976543
No 246
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.6e-35 Score=310.58 Aligned_cols=201 Identities=29% Similarity=0.451 Sum_probs=175.0
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.+.||.|+||.||++.+..+++.||+|++.... .....+.+|+++++.+ .|+||+++++.+...+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~~~~~~~~~~~~~~ 73 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-------NHPNIIKYYESFEEKGK 73 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-------CCCChhheEEEEecCCE
Confidence 5889999999999999999999999999999998542 4556778899999988 48999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 187 LCICFELLDS-NLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.++|+|++++ +|.+.+.... ...+++..++.++.||+.||.|||+++|+|+||+|+||+++ .++.+||+|||++
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~~~ 150 (258)
T cd08215 74 LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFGIS 150 (258)
T ss_pred EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCccce
Confidence 9999999985 8888887653 35699999999999999999999999999999999999995 5688999999998
Q ss_pred cccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 264 CTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 264 ~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
...... .....++..|+|||.+....++.++||||||+++|+|++|..||...+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~ 210 (258)
T cd08215 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE 210 (258)
T ss_pred eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH
Confidence 654332 233467888999999998899999999999999999999999997665443
No 247
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.6e-36 Score=319.38 Aligned_cols=203 Identities=32% Similarity=0.528 Sum_probs=173.9
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||++++..+++.||||++... ......+.+|+++++.+. +|+||+++++++...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~~i~~~~~~~~~~ 74 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN------GHPGIIKLYYTFQDE 74 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc------cCCCchhHHHHhcCC
Confidence 3799999999999999999999999999999999752 233456778888888883 389999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+.+++|||++. ++|.+++.... .+++..++.++.||+.||+|||+++++|+||||+||+++ .++.++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~ 149 (280)
T cd05581 75 ENLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTA 149 (280)
T ss_pred ceEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCccc
Confidence 99999999995 78998887653 699999999999999999999999999999999999994 6688999999998
Q ss_pred ccccccc-----------------------eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 264 CTEDRTV-----------------------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 264 ~~~~~~~-----------------------~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
....... ....++..|+|||++....++.++|||||||++++|++|..||.......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 6433221 12356788999999988889999999999999999999999998766443
Q ss_pred HH
Q 002401 321 LL 322 (927)
Q Consensus 321 ~l 322 (927)
.+
T Consensus 230 ~~ 231 (280)
T cd05581 230 TF 231 (280)
T ss_pred HH
Confidence 33
No 248
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.5e-36 Score=331.19 Aligned_cols=200 Identities=20% Similarity=0.256 Sum_probs=163.1
Q ss_pred EEeccC--CceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHG--TFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~G--sfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
..||.| +|++||+|++..+++.||||+++.. ....+.+.+|+.+++.+ +|+||++++++|...+.+|+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-------~h~niv~~~~~~~~~~~~~~ 76 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-------RHPNIMTSWTVFTTGSWLWV 76 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-------CCCCcceEeeeEecCCceEE
Confidence 456666 9999999999999999999998743 23345677788888777 58999999999999999999
Q ss_pred EEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 190 CFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 190 VmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
||||+. ++|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+||+.+.....
T Consensus 77 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~ 153 (328)
T cd08226 77 ISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVR 153 (328)
T ss_pred EEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhc
Confidence 999998 5888888776545699999999999999999999999999999999999995 568899999986532111
Q ss_pred ---c-------ceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002401 269 ---T-------VYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRR 324 (927)
Q Consensus 269 ---~-------~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~ 324 (927)
. .....++..|+|||++.+. .++.++|||||||++|||++|+.||........+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~ 221 (328)
T cd08226 154 NGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQ 221 (328)
T ss_pred cCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHH
Confidence 0 0111235569999999764 578999999999999999999999987665444333
No 249
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=348.63 Aligned_cols=253 Identities=25% Similarity=0.394 Sum_probs=217.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEe----CChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik----~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
..|.-++.||.|+||-||-|+|..+.+.||||++. ......+.++.|++.|++| .|||+|.+.+||..+
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-------~HPntieYkgCyLre 98 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-------RHPNTIEYKGCYLRE 98 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-------cCCCcccccceeecc
Confidence 56777788999999999999999999999999985 2345567889999999999 489999999999999
Q ss_pred ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 185 ~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
...|||||||-|+-.|++.... +++.+.+|..|+.+.|.||+|||+++.||||||..|||++ +.+.|||+|||.|.
T Consensus 99 ~TaWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSAs 174 (948)
T KOG0577|consen 99 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSAS 174 (948)
T ss_pred chHHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccchh
Confidence 9999999999987777776654 6799999999999999999999999999999999999995 77999999999996
Q ss_pred cccccceeeccCCCCCCcchhcC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLLG---YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~~---~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
... ....++||++|||||+|+. +.|+-++||||||++..||...++|+-..+....+..|.+.-. |
T Consensus 175 i~~-PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNes---P------- 243 (948)
T KOG0577|consen 175 IMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES---P------- 243 (948)
T ss_pred hcC-chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCC---C-------
Confidence 554 3457899999999999974 4799999999999999999999999988777777776654211 1
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.+ ....
T Consensus 244 ---------------------------------------------tL-----------------------------qs~e 249 (948)
T KOG0577|consen 244 ---------------------------------------------TL-----------------------------QSNE 249 (948)
T ss_pred ---------------------------------------------CC-----------------------------CCch
Confidence 00 0123
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.++.|+.||..||+.-|.+|||.+++|.|+|+...+
T Consensus 250 WS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R 285 (948)
T KOG0577|consen 250 WSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER 285 (948)
T ss_pred hHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence 456899999999999999999999999999998754
No 250
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.2e-35 Score=314.99 Aligned_cols=193 Identities=28% Similarity=0.443 Sum_probs=163.2
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
....||+|+||.||++++..++..||+|.+... ....+.+.+|+.+++.+ .|+||+++++++...+.+++||
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL-------KHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-------CCCCeeeeeeeeccCCEEEEEE
Confidence 345899999999999999999999999998754 33456788899999988 4899999999999999999999
Q ss_pred eccc-chhHHHHHhhccCCC--CHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 192 ELLD-SNLYELIKINHFRGL--SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 192 Ey~~-GsL~dlL~~~~~~~L--~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
||+. ++|.+++.... ..+ ++..+..++.||+.||+|||+++|+||||||+||+++ ...+.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 85 EQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheeccc
Confidence 9997 58888877542 234 8889999999999999999999999999999999995 3357899999999864321
Q ss_pred ---cceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 269 ---TVYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 269 ---~~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
......++..|+|||++... .++.++|||||||++|+|++|+.||..
T Consensus 162 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 162 INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 12234578899999998765 388999999999999999999999964
No 251
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=8.9e-36 Score=319.19 Aligned_cols=198 Identities=25% Similarity=0.473 Sum_probs=169.9
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.|++.+.||+|+||.||+|.+..+++.||||+++.. ......+.+|+++++.+.+. .|+||+++++++.....+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~----~~~~vi~~~~~~~~~~~~ 77 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQS----QPPNITKYYGSYLKGPRL 77 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccC----CCCCeeeEeeeeeeCCEE
Confidence 578889999999999999999999999999998753 33456678899999999542 589999999999999999
Q ss_pred EEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+.+ +|.+++... .+++..++.++.||+.||.|||+.+|+|+||+|+||+++ ..+.++|+|||++...
T Consensus 78 ~lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALL 151 (277)
T ss_pred EEEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeec
Confidence 999999975 787777543 589999999999999999999999999999999999995 5789999999998653
Q ss_pred ccc---ceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 267 DRT---VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 267 ~~~---~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
... .....++..|+|||.+.+. .++.++|||||||++|+|++|..||....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 206 (277)
T cd06917 152 NQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD 206 (277)
T ss_pred CCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 322 2334678889999998754 57899999999999999999999997544
No 252
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.4e-36 Score=319.85 Aligned_cols=206 Identities=26% Similarity=0.367 Sum_probs=172.8
Q ss_pred CceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~-----~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|.+.+.||+|+||.||+|.+. .+++.||||+++... ...+.+.+|+++|+.+ .|+||+++++++
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~ 77 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-------QHENIVKFYGVC 77 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-------CCCCchheeeEE
Confidence 67999999999999999999764 346789999998643 2356788999999998 589999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhc------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEee
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINH------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT 248 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~ 248 (927)
......|+||||+. ++|.+++.... ...+++..+..++.||+.||+|||+++|+||||||+||+++
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~- 156 (280)
T cd05049 78 TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG- 156 (280)
T ss_pred ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc-
Confidence 99999999999997 58888886542 23478999999999999999999999999999999999994
Q ss_pred cCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002401 249 SVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL 322 (927)
Q Consensus 249 ~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l 322 (927)
.++.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|||++ |..||...+..+.+
T Consensus 157 --~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~ 234 (280)
T cd05049 157 --YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234 (280)
T ss_pred --CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 6689999999998643221 112234678999999999999999999999999999998 99999776655544
Q ss_pred HH
Q 002401 323 RR 324 (927)
Q Consensus 323 ~~ 324 (927)
..
T Consensus 235 ~~ 236 (280)
T cd05049 235 EC 236 (280)
T ss_pred HH
Confidence 33
No 253
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.4e-35 Score=308.45 Aligned_cols=196 Identities=32% Similarity=0.509 Sum_probs=173.5
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
+|++.+.||+|++|.||+|.+..+++.|++|++.... ...+.+.+|+++++++ +|+||+++++++...
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-------QHPNIVRYYGSERDEEK 73 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-------CCCCEeeEEEEEecCCC
Confidence 5788999999999999999999999999999998654 4567788899999998 489999999999988
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
..+++|+|++. ++|.+++.... .+++..++.++.||+.||+|||+.+++|+||+|+||+++ .++.+||+|||.+
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~ 148 (260)
T cd06606 74 NTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCA 148 (260)
T ss_pred CeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccE
Confidence 89999999995 68888887654 799999999999999999999999999999999999995 5689999999998
Q ss_pred cccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 264 CTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 264 ~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
...... .....++..|+|||.+....++.++|||||||++|+|++|..||....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 149 KRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred EecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 755433 234567888999999988889999999999999999999999997654
No 254
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-35 Score=320.89 Aligned_cols=256 Identities=26% Similarity=0.449 Sum_probs=210.9
Q ss_pred cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
..+.|++.+.||+|.||.||++.+..+++.||+|+++......+.+.+|+++++.+ +|+||+++++++...+.
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 89 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-------KHPNIVDYYDSYLVGDE 89 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC-------CCCCeeEEEEEEEECCE
Confidence 44789999999999999999999998899999999987654566788899999888 48999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.|+|+||++ ++|.+++.... ..+++..+..++.||+.||+|||+.||+|+||||+||+++ .++.+||+|||++..
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~~ 165 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFAAQ 165 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchhhh
Confidence 999999998 68999887754 3699999999999999999999999999999999999994 568899999998854
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....++..|+|||++.+..++.++||||||||+|+|++|+.||...+.......+... + .++
T Consensus 166 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~~-------- 235 (286)
T cd06614 166 LTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-G-IPP-------- 235 (286)
T ss_pred hccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-C-CCC--------
Confidence 3321 12335678899999999888999999999999999999999999766554333322110 0 000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
+.....+
T Consensus 236 -------------------------------------------------------------------------~~~~~~~ 242 (286)
T cd06614 236 -------------------------------------------------------------------------LKNPEKW 242 (286)
T ss_pred -------------------------------------------------------------------------CcchhhC
Confidence 0000112
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+..+.+||++||..||.+|||+.|+|+|+||+..
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 3468899999999999999999999999999974
No 255
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=6.8e-36 Score=338.20 Aligned_cols=200 Identities=26% Similarity=0.366 Sum_probs=166.9
Q ss_pred CceEEEEEeccCCceeEEEeeccC-----CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-----MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-----tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|++.+.||+|+||.||+|++.. +.+.||||+++.. ......+.+|+++++.+. .|+||++++++|
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~------~h~nIv~~~~~~ 111 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG------QHKNIVNLLGAC 111 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc------cCCceeeEeeEe
Confidence 689999999999999999998543 3457999999753 334456788999999883 489999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhc------------------------------------------------------
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINH------------------------------------------------------ 206 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~------------------------------------------------------ 206 (927)
...+.+|||||||. |+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999997 68888876432
Q ss_pred --------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccce-
Q 002401 207 --------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY- 271 (927)
Q Consensus 207 --------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~- 271 (927)
...+++..++.++.||++||+|||+++|+||||||+|||++ .++.+||+|||++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcce
Confidence 12478889999999999999999999999999999999995 568899999999865432211
Q ss_pred ----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002401 272 ----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS 317 (927)
Q Consensus 272 ----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s 317 (927)
...++..|+|||++....++.++|||||||++|||++ |+.||....
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~ 319 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGIL 319 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccc
Confidence 1123467999999998899999999999999999997 999997643
No 256
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.4e-35 Score=313.58 Aligned_cols=206 Identities=25% Similarity=0.408 Sum_probs=174.7
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.++|++.++||+|+||.||+|.+.. ++.||||.++......+.+.+|+++++++ .|+||+++++++...+.+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKL-------RHPKLIQLYAVCTLEEPI 76 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHC-------CCCCccceeEEEecCCCe
Confidence 3689999999999999999998654 46799999987655566788999999998 489999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|+||||+. ++|.+++.......+++..+..++.||+.||.|||+++|+|+||||+||+++ .++.+||+|||++...
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLARVI 153 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEEEc
Confidence 99999995 7899998765545689999999999999999999999999999999999995 6688999999998654
Q ss_pred cccce-eecc---CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 267 DRTVY-SYIQ---SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 267 ~~~~~-~~~g---T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
..... ...+ +..|+|||++.+..++.++|||||||++|||++ |+.||.+....+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 216 (261)
T cd05068 154 KEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQ 216 (261)
T ss_pred cCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 32211 1122 346999999998899999999999999999999 9999987665554443
No 257
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3e-35 Score=318.41 Aligned_cols=206 Identities=24% Similarity=0.335 Sum_probs=167.6
Q ss_pred CCceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~-----~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
.++|++.++||+|+||.||+|..+ ..+..||+|+++... .....+.+|+.+++.+ +|+||++++++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~ 77 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-------TCHHVVRLLGV 77 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-------CCCCeeeEEEE
Confidence 379999999999999999998654 235589999987543 2334567788888888 58999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhc--------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINH--------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK 251 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~--------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~ 251 (927)
+...+..|+||||+. ++|.+++.... ...++...++.++.||+.||+|||+++|+||||||+|||++ .
T Consensus 78 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~ 154 (288)
T cd05061 78 VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---H 154 (288)
T ss_pred EcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---C
Confidence 999999999999997 68998887532 12356778999999999999999999999999999999994 5
Q ss_pred CCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 252 PAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 252 ~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
++.+||+|||+++...... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+.+.
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~ 232 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 232 (288)
T ss_pred CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 6889999999986432211 11234567999999998899999999999999999998 788997766554433
No 258
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=322.69 Aligned_cols=197 Identities=19% Similarity=0.239 Sum_probs=167.6
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee----cce
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC----QRH 186 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~----~~~ 186 (927)
..|++|+++.||++.. +++.||||+++... ...+.+.+|+.+|+++ .||||+++++++.+ ...
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~nIv~~~g~~~~~~~~~~~ 96 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-------DSNNILKIYGFIIDIVDDLPR 96 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-------CCCCEEEEeeeEEecccCCCc
Confidence 4689999999999966 68899999997532 2246677999999999 58999999999877 357
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
++|||||+. |+|.+++... ..+++.....++.||+.||.|||+ .+++||||||+|||++ .++.+||+|||++.
T Consensus 97 ~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~kl~dfg~~~ 171 (283)
T PHA02988 97 LSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKLKIICHGLEK 171 (283)
T ss_pred eEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcEEEcccchHh
Confidence 899999998 5788888764 368999999999999999999998 4999999999999994 67899999999997
Q ss_pred cccccceeeccCCCCCCcchhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLLG--YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM 325 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~~--~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I 325 (927)
..........++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+....+
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i 234 (283)
T PHA02988 172 ILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI 234 (283)
T ss_pred hhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 65554455678899999999976 58999999999999999999999999877665554443
No 259
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-36 Score=341.40 Aligned_cols=248 Identities=28% Similarity=0.452 Sum_probs=203.3
Q ss_pred EeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecc
Q 002401 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL 194 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~ 194 (927)
+||+|.||+||.|+|..+...+|||-|... ....+-...||.+.+.|+ |.|||++++.+..++++-|.||-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr-------HkNIVrYLGs~senGf~kIFMEqV 654 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR-------HKNIVRYLGSVSENGFFKIFMEQV 654 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh-------hHhHHHHhhccCCCCeEEEEeecC
Confidence 699999999999999999999999999754 445566778999999996 669999999999999999999999
Q ss_pred cc-hhHHHHHhhccCCC--CHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc---cc
Q 002401 195 DS-NLYELIKINHFRGL--SLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE---DR 268 (927)
Q Consensus 195 ~G-sL~dlL~~~~~~~L--~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~---~~ 268 (927)
+| +|..+++.. .+++ .|.++-.+.+||++||.|||++.|||||||-+||||+ .-.|.+||+|||.++.. +.
T Consensus 655 PGGSLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 655 PGGSLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred CCCcHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCc
Confidence 85 676666554 5677 8999999999999999999999999999999999996 45799999999998643 34
Q ss_pred cceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcch
Q 002401 269 TVYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSK 346 (927)
Q Consensus 269 ~~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~ 346 (927)
...++.||..|||||++..+ .|+.++|||||||++.||.||++||..... |-..|.+- -
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs--------------pqAAMFkV-----G 792 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS--------------PQAAMFKV-----G 792 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC--------------hhHhhhhh-----c
Confidence 45567899999999999876 599999999999999999999999954321 11111110 0
Q ss_pred hhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHH
Q 002401 347 FFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLAL 426 (927)
Q Consensus 347 ~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l 426 (927)
+|+.. +.+| ..++.++
T Consensus 793 myKvH---------------------------------------------------P~iP-------------eelsaea 808 (1226)
T KOG4279|consen 793 MYKVH---------------------------------------------------PPIP-------------EELSAEA 808 (1226)
T ss_pred ceecC---------------------------------------------------CCCc-------------HHHHHHH
Confidence 01100 0011 2355688
Q ss_pred HHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 427 VDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 427 ~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+.||.+|+..||.+||+|.++|+.||++..
T Consensus 809 k~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 809 KNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 999999999999999999999999999875
No 260
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.4e-35 Score=307.55 Aligned_cols=197 Identities=32% Similarity=0.527 Sum_probs=173.0
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.+.||+|.+|.||++++..+++.||||.+.... .....+.+|+++++++ .|+||+++++++...+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-------KHPNIVKYIGSIETSDS 73 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-------CCCCccEEEEEEEeCCE
Confidence 5889999999999999999999999999999998654 3566788899999988 48999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+++|||++++ +|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++..
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~ 148 (254)
T cd06627 74 LYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATK 148 (254)
T ss_pred EEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEecccccee
Confidence 9999999985 888887665 4699999999999999999999999999999999999995 468999999999975
Q ss_pred ccccc---eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 266 EDRTV---YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 266 ~~~~~---~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
..... ....++..|+|||.+.+..++.++|||+||+++|+|++|..||.....
T Consensus 149 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~ 204 (254)
T cd06627 149 LNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP 204 (254)
T ss_pred cCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH
Confidence 44322 234678889999999888889999999999999999999999976543
No 261
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.7e-35 Score=313.42 Aligned_cols=205 Identities=22% Similarity=0.336 Sum_probs=171.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|++.+.||+|+||.||+++... +..||||.++........+.+|+.+++.+ +|+||+++++++.....++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~ 75 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL-------SHEKLVQLYGVCTKQRPIY 75 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC-------CCCCeeeEEEEEccCCCcE
Confidence 689999999999999999997654 44599999986554456788899999888 5899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||++....
T Consensus 76 lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 76 IVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVL 151 (256)
T ss_pred EEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCccceecC
Confidence 9999997 57888887643 3689999999999999999999999999999999999994 56889999999986433
Q ss_pred ccc-ee---eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 268 RTV-YS---YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 268 ~~~-~~---~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
... .. ..++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+
T Consensus 152 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05113 152 DDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV 214 (256)
T ss_pred CCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 221 11 233567999999988889999999999999999998 99999766655444433
No 262
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.3e-35 Score=311.17 Aligned_cols=201 Identities=25% Similarity=0.370 Sum_probs=175.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|++.+.||.|+||.||+|... ++.||||+++......+++.+|+.+++.+ .|+||+++++++......|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTL-------RHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhc-------CCcceeeeEEEEcCCCCeE
Confidence 68999999999999999999754 78899999987755567888999999998 4899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.......+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.+||+|||.+....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLAKEAS 153 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEcccccccccc
Confidence 9999998 6999988776545699999999999999999999999999999999999994 67889999999997664
Q ss_pred ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 268 RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 268 ~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
........+..|+|||.+....++.++|||||||++|||++ |..||......+.
T Consensus 154 ~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 208 (256)
T cd05039 154 QGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV 208 (256)
T ss_pred cccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 44333344667999999988889999999999999999997 9999976654443
No 263
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.8e-35 Score=314.41 Aligned_cols=203 Identities=25% Similarity=0.367 Sum_probs=170.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+|++.++||+|+||.||+|++..+. .||||+++......+.+.+|+++++.+ +|+||+++++++. ....|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l-------~~~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL-------RHEKLVQLYAVVS-EEPIY 76 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhC-------CCCCcceEEEEEC-CCCcE
Confidence 68999999999999999999887664 599999987555556788999999998 5899999999874 45689
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.......+++..++.++.||++||+|||+.+|+|+||||+||+++ .++.+||+|||.+....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE 153 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeecc
Confidence 9999998 5899988765445689999999999999999999999999999999999994 56889999999996543
Q ss_pred ccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 268 RTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 268 ~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
.... ...++..|+|||++.+..++.++|||||||++|||++ |..||......+.+.
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~ 214 (262)
T cd05071 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 214 (262)
T ss_pred ccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Confidence 3221 2234567999999988899999999999999999999 899997765544433
No 264
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.7e-35 Score=320.56 Aligned_cols=207 Identities=24% Similarity=0.346 Sum_probs=171.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe--EEEEEEEeC--ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS--FVAVKIIKN--QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~--~VAIKiik~--~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||+|++..++. .+++|+++. .....+.+.+|++++.++. .||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~------~hp~iv~~~~~~~~~ 75 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG------HHPNIINLLGACENR 75 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc------CCCchhheEEEEccC
Confidence 579999999999999999998877664 478888874 2334567888999998884 389999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec
Q 002401 185 RHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS 249 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~ 249 (927)
+.+|+||||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~-- 153 (297)
T cd05089 76 GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG-- 153 (297)
T ss_pred CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC--
Confidence 99999999997 68998886532 12488999999999999999999999999999999999994
Q ss_pred CCCCeEEEeecCCcccccccceee--ccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 250 VKPAEIKIIDFGSACTEDRTVYSY--IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 250 ~~~g~IKL~DFGlA~~~~~~~~~~--~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
.++.+||+|||++.......... ..+..|+|||++....++.++|||||||++|||++ |..||......+....
T Consensus 154 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~ 230 (297)
T cd05089 154 -ENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEK 230 (297)
T ss_pred -CCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 56889999999986433222222 22456999999998899999999999999999997 9999987665554433
No 265
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.8e-36 Score=322.89 Aligned_cols=196 Identities=28% Similarity=0.464 Sum_probs=168.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+.|++.+.||+|+||.||+|.+..+++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++.....
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~ 76 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DSPYITRYYGSYLKGTK 76 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-------CCCccHhhhcccccCCc
Confidence 4677788999999999999999999999999998743 33445677899998887 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+||||++ ++|.+++.. ..+++..++.++.||++||.|||+++|+|+||+|+||+++ .++.+||+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~ 150 (277)
T cd06642 77 LWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQ 150 (277)
T ss_pred eEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEcccccccc
Confidence 999999998 477777654 3589999999999999999999999999999999999995 568899999999865
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
.... .....++..|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06642 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 205 (277)
T ss_pred ccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc
Confidence 4322 123457888999999998899999999999999999999999996543
No 266
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.7e-35 Score=315.58 Aligned_cols=250 Identities=26% Similarity=0.444 Sum_probs=202.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+-|++.++||.|+||.||++.+..+++.||||++... ......+.+|+.+++.+ .|+||+++++++..++.
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~ 76 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DSPYVTKYYGSYLKDTK 76 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-------CCCCEeEEEEEEEeCCe
Confidence 4577889999999999999999999999999998643 23345677888988888 58999999999999999
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+||||+++ +|.+++... .+++..+..++.||+.+|.|||+++|+|+||||+||+++ .++.++|+|||++..
T Consensus 77 ~~lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~ 150 (277)
T cd06641 77 LWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQ 150 (277)
T ss_pred EEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeeccccee
Confidence 9999999985 777777543 589999999999999999999999999999999999994 668899999999864
Q ss_pred cccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhh
Q 002401 266 EDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK 342 (927)
Q Consensus 266 ~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~ 342 (927)
.... .....++..|+|||.+.+..++.++|||||||++|+|++|..||...........+.. + .++
T Consensus 151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~-~~~-------- 219 (277)
T cd06641 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK--N-NPP-------- 219 (277)
T ss_pred cccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc--C-CCC--------
Confidence 3322 2234678889999999888899999999999999999999999975543332222110 0 000
Q ss_pred hcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhh
Q 002401 343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI 422 (927)
Q Consensus 343 ~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~ 422 (927)
. + ...+
T Consensus 220 --------------------------------------------~-----------------------~-------~~~~ 225 (277)
T cd06641 220 --------------------------------------------T-----------------------L-------EGNY 225 (277)
T ss_pred --------------------------------------------C-----------------------C-------Cccc
Confidence 0 0 0012
Q ss_pred HHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 423 s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
+..+.+||.+||..||++||++.|+++||||...
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 226 SKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 3468899999999999999999999999999874
No 267
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.4e-35 Score=320.90 Aligned_cols=253 Identities=25% Similarity=0.413 Sum_probs=205.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
+.|...++||+|+||.||+|++..+++.||||++... ......+.+|+++++.+ .|+||+++++++.+.
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~ 93 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-------KHPNTIEYKGCYLKE 93 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-------CCCCCccEEEEEEeC
Confidence 4577788999999999999999999999999998742 23345677899998888 589999999999999
Q ss_pred ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 185 ~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
...|+||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++ .++.+||+|||++.
T Consensus 94 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~ 169 (313)
T cd06633 94 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSAS 169 (313)
T ss_pred CEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCc
Confidence 9999999999999888876543 4689999999999999999999999999999999999994 66889999999986
Q ss_pred cccccceeeccCCCCCCcchhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~---~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... .....++..|+|||++. ...++.++|||||||++|+|++|..||...+....+..+... ..+..
T Consensus 170 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~----- 240 (313)
T cd06633 170 KSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN---DSPTL----- 240 (313)
T ss_pred ccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---CCCCC-----
Confidence 4332 23456788999999985 346889999999999999999999999776554444333210 00000
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
....
T Consensus 241 ----------------------------------------------------------------------------~~~~ 244 (313)
T cd06633 241 ----------------------------------------------------------------------------QSNE 244 (313)
T ss_pred ----------------------------------------------------------------------------Cccc
Confidence 0001
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
++..+.+||.+||+.||++|||+.++|+||||...+
T Consensus 245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 245 WTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 224678999999999999999999999999998643
No 268
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.2e-35 Score=310.55 Aligned_cols=198 Identities=23% Similarity=0.389 Sum_probs=170.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC----ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~----~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||+|++..+++.||||+++. +......+.+|+++++.+ .|+||+++++++...
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~ 74 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-------NHPNVIKYLDSFIED 74 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-------CCcceeeeeeeEEEC
Confidence 589999999999999999999999999999998864 233345678899999988 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 185 RHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
+.+++||||++ ++|.+++.... ...+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.++|+|||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g 151 (267)
T cd08228 75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccc
Confidence 99999999998 58887775432 23489999999999999999999999999999999999994 56789999999
Q ss_pred Cccccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 262 SACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 262 lA~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
++...... .....++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 98654322 12346788899999999888999999999999999999999999643
No 269
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.6e-35 Score=335.05 Aligned_cols=201 Identities=26% Similarity=0.382 Sum_probs=167.7
Q ss_pred CceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|++.++||+|+||.||+|++ ..++..||||+++.. ....+.+.+|+++|+.+. .||||++++++|
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~------~HpnIv~l~~~~ 108 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG------NHINIVNLLGAC 108 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc------CCcceeeeeeee
Confidence 5899999999999999999963 456778999999753 234456788999999984 389999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhc------------------------------------------------------
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINH------------------------------------------------------ 206 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~------------------------------------------------------ 206 (927)
...+..++|||||. |+|.+++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999998 68888886532
Q ss_pred -------------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 207 -------------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 207 -------------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
...+++..++.++.||+.||+|||+++|+||||||+|||++ ....+||+|||++....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceecc
Confidence 12478889999999999999999999999999999999995 56789999999996543
Q ss_pred ccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002401 268 RTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE 318 (927)
Q Consensus 268 ~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~ 318 (927)
.... ...++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~ 322 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV 322 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc
Confidence 2211 1223457999999999999999999999999999998 8999976543
No 270
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.2e-35 Score=320.77 Aligned_cols=197 Identities=27% Similarity=0.418 Sum_probs=166.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++|++.++||+|+||.||+|++..+++.||||+++... .....+..|+.++..+. +|+||+++++++.....
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~------~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH------DCPYIVKCYGYFITDSD 88 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc------CCCchHhhheeeecCCe
Confidence 78999999999999999999999999999999998542 23345566776665552 58999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+|+||||+.+.|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||+|+||+++ .++.+||+|||++..
T Consensus 89 ~~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~~~kL~dfg~~~~ 164 (296)
T cd06618 89 VFICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASGNVKLCDFGISGR 164 (296)
T ss_pred EEEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCCCEEECccccchh
Confidence 99999999988877776543 468999999999999999999997 6999999999999994 678999999999865
Q ss_pred cccc--ceeeccCCCCCCcchhcCCC----CCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 266 EDRT--VYSYIQSRYYRSPEVLLGYQ----YTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 266 ~~~~--~~~~~gT~~Y~APEvl~~~~----ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
.... .....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||..
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 165 LVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred ccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 3322 22234677899999987653 88999999999999999999999965
No 271
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.8e-35 Score=316.89 Aligned_cols=208 Identities=26% Similarity=0.394 Sum_probs=173.5
Q ss_pred CCceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d-----~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
..+|.+.+.||+|+||.||++.+ ..++..||+|.++.. ....+.+.+|+++++++ .|+||+++++++
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~ 76 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-------QHEHIVKFYGVC 76 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-------CCCCcceEEEEE
Confidence 46899999999999999999975 345667999998754 34456788999999998 589999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhc-----------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINH-----------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS 249 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~-----------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~ 249 (927)
...+.+++||||+. ++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 77 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~-- 154 (288)
T cd05093 77 VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-- 154 (288)
T ss_pred ecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc--
Confidence 99999999999997 68888886542 12489999999999999999999999999999999999994
Q ss_pred CCCCeEEEeecCCcccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 250 VKPAEIKIIDFGSACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 250 ~~~g~IKL~DFGlA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
+++.+||+|||++........ ...++..|+|||++.+..++.++|||||||++|+|++ |.+||......+.+.
T Consensus 155 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~ 233 (288)
T cd05093 155 -ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 233 (288)
T ss_pred -cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 678999999999975432211 1234667999999998899999999999999999998 999998766555444
Q ss_pred HH
Q 002401 324 RM 325 (927)
Q Consensus 324 ~I 325 (927)
.+
T Consensus 234 ~i 235 (288)
T cd05093 234 CI 235 (288)
T ss_pred HH
Confidence 43
No 272
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.7e-35 Score=311.15 Aligned_cols=204 Identities=25% Similarity=0.389 Sum_probs=172.9
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|+++++||+|+||.||+|.+. +++.||+|++.........+.+|+.+++.+ +|+||+++++++. .+.+|
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQL-------QHPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred HHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhc-------CCcCeeeEEEEEc-cCCcE
Confidence 78999999999999999999865 467799999987665567788999999998 5899999999874 56799
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.......+++..+..++.||+.||+|||+.+|+|+||||+||+++ .++.++|+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCcceeecC
Confidence 9999997 6899988766555789999999999999999999999999999999999994 66889999999986543
Q ss_pred ccc----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 268 RTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 268 ~~~----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
... ....++..|+|||++....++.++|||||||++|||++ |++||.+.+..+....
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~ 215 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN 215 (260)
T ss_pred CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH
Confidence 211 12234567999999998889999999999999999999 9999987765554443
No 273
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.8e-35 Score=311.98 Aligned_cols=244 Identities=28% Similarity=0.528 Sum_probs=199.9
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||.|+||.||++++..+++.||||++.... ...+.+.+|+++++.+ .|+||+++++.+.....+|+|||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~~~~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-------QSPYVVKLYYSFQGKKNLYLVME 73 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-------CCcchhHHHHheecCcEEEEEEe
Confidence 689999999999999999999999997543 3455677888888888 48999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc---
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--- 268 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~--- 268 (927)
|+. ++|.+++.... .+++..++.++.||++||+|||+++|+|+||+|+||+++ .++.+||+|||++.....
T Consensus 74 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~~~~~~~ 148 (265)
T cd05579 74 YLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSKVGLVRRQ 148 (265)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccchhcccCcc
Confidence 997 58888887643 689999999999999999999999999999999999994 668999999999864322
Q ss_pred --------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 269 --------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 269 --------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
......++..|+|||.+....++.++|||||||++|+|++|..||......+....+.. +...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~------- 219 (265)
T cd05579 149 INLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GKIE------- 219 (265)
T ss_pred cccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCcC-------
Confidence 12234577889999999888899999999999999999999999977665444333221 0000
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
+ + . ..
T Consensus 220 ----------------------------------------------------~------------~--~---------~~ 224 (265)
T cd05579 220 ----------------------------------------------------W------------P--E---------DV 224 (265)
T ss_pred ----------------------------------------------------C------------C--c---------cc
Confidence 0 0 0 00
Q ss_pred hhHHHHHHHHHhccccCcCCCCCH---HHHHhCCCcCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSP---FQASRHPFVTGE 456 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA---~EaLqHPwf~~~ 456 (927)
..+..+.+||++||+.||++|||+ .|+|+||||++.
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 023478899999999999999999 999999999865
No 274
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.2e-35 Score=314.08 Aligned_cols=206 Identities=25% Similarity=0.360 Sum_probs=168.9
Q ss_pred CCceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~-----~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
.++|++.+.||+|+||.||+|.+. .+++.||||+++... .....+.+|+.+++.+ +|+||++++++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~iv~~~~~ 77 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-------NCHHVVRLLGV 77 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-------CCCCeeeEEEE
Confidence 378999999999999999998754 345789999986432 2345677899998887 58999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhcc--------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINHF--------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK 251 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~~--------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~ 251 (927)
+......++||||+. ++|.+++..... ..+++..+..++.||++||+|||+.+++|+||||+|||++ .
T Consensus 78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~ 154 (277)
T cd05062 78 VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---E 154 (277)
T ss_pred EcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---C
Confidence 999999999999998 588888865321 2357788999999999999999999999999999999995 5
Q ss_pred CCeEEEeecCCcccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 252 PAEIKIIDFGSACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 252 ~g~IKL~DFGlA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
++.+||+|||++........ ...++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+.
T Consensus 155 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~ 232 (277)
T cd05062 155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR 232 (277)
T ss_pred CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 68899999999864332211 1234667999999998899999999999999999999 789998766554443
No 275
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.4e-35 Score=321.14 Aligned_cols=195 Identities=21% Similarity=0.253 Sum_probs=160.0
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
+.+.+|.| +.||++++..+++.||||+++.. ......+.+|+++++.+ .|+||++++++|...+..++
T Consensus 6 i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-------~h~~i~~~~~~~~~~~~~~~ 76 (314)
T cd08216 6 IGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-------QHPNILPYVTSFIVDSELYV 76 (314)
T ss_pred hhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-------CCcchhhhhheeecCCeEEE
Confidence 33444444 55666666779999999999754 34556788999999988 48999999999999999999
Q ss_pred EEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 190 CFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 190 VmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
||||+. ++|.+++.......+++..++.+++||+.||+|||+++|+|+||||+|||++ .++.+||+||+.+.....
T Consensus 77 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~ 153 (314)
T cd08216 77 VSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIK 153 (314)
T ss_pred EEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeecc
Confidence 999998 5788888765545699999999999999999999999999999999999995 568899999998853321
Q ss_pred ----------cceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002401 269 ----------TVYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPGASEF 319 (927)
Q Consensus 269 ----------~~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~ 319 (927)
......++..|+|||++... .++.++|||||||++|||++|+.||......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~ 216 (314)
T cd08216 154 HGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT 216 (314)
T ss_pred ccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 11223467789999999764 5889999999999999999999999876543
No 276
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7.7e-35 Score=309.92 Aligned_cols=204 Identities=26% Similarity=0.383 Sum_probs=171.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|++.++||+|+||.||+|.+..+. .||+|++.......+.+.+|+++++.+ .|+||+++++++. .+..+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKL-------RHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhC-------CCCCeeeEEEEEc-CCCcE
Confidence 68999999999999999999876654 599999886555556788899999988 5899999999875 45689
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.......+++..+..++.||+.||+|||+.+|+|+||||+||+++ +++.+||+|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLVCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCeEEECCCccceEcc
Confidence 9999998 5899988765545589999999999999999999999999999999999994 67889999999996543
Q ss_pred ccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 268 RTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 268 ~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
.... ...++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05069 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ 215 (260)
T ss_pred CCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 2211 2234567999999998899999999999999999999 9999987665554433
No 277
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.9e-35 Score=310.33 Aligned_cols=200 Identities=26% Similarity=0.362 Sum_probs=169.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe-eccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV-CQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~-~~~~l 187 (927)
++|++.+.||+|+||.||++.. .++.||+|.++.+. ..+.+.+|+.+++.+ +|+||+++++++. .....
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~-~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-TAQAFLAEASVMTQL-------RHSNLVQLLGVIVEEKGGL 75 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc-hHHHHHHHHHHHHhC-------CCCCeeeEEEEEEcCCCce
Confidence 6899999999999999999965 47789999997654 345678899999988 5899999999765 45679
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
++||||+. ++|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++ .++.+||+|||++...
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~ 152 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEA 152 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEEecCCccceec
Confidence 99999998 5899988776545589999999999999999999999999999999999994 6789999999998754
Q ss_pred cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 267 DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 267 ~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
.........+..|+|||++....++.++|||||||++|||++ |+.||......+.
T Consensus 153 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~ 208 (256)
T cd05082 153 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV 208 (256)
T ss_pred cccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 443333445667999999998899999999999999999997 9999976554443
No 278
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.2e-35 Score=312.09 Aligned_cols=203 Identities=23% Similarity=0.311 Sum_probs=170.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+|++.+.||+|+||.||++++. ++..+|||+++........+.+|+++++.+ .|+||+++++++...+..|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKL-------SHPNLVQLYGVCTKQRPIF 75 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhC-------CCCCEEEEEEEEcCCCceE
Confidence 57889999999999999999875 466799999876544456778899999988 5899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||++ ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+||+++ .++.+||+|||++....
T Consensus 76 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 76 IVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVL 151 (256)
T ss_pred EEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCcccceecc
Confidence 9999997 58888887654 3689999999999999999999999999999999999994 66889999999986543
Q ss_pred ccc-eeec---cCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 268 RTV-YSYI---QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 268 ~~~-~~~~---gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
... .... .+..|+|||++.+..++.++|||||||++|||++ |+.||...+..+...
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 212 (256)
T cd05059 152 DDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVE 212 (256)
T ss_pred cccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Confidence 221 1112 2346999999998899999999999999999999 899997766554433
No 279
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4e-35 Score=311.67 Aligned_cols=204 Identities=27% Similarity=0.397 Sum_probs=171.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|+++++||+|+||.||+|.+. .+..||+|+++......+.+.+|+.+++++ +|+||+++++++. ....+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-------~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKL-------RHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhc-------CCCceEEEEeEEC-CCCcE
Confidence 68999999999999999999765 456699999986555556788999999998 5899999999875 45689
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.......+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIE 153 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeecc
Confidence 9999997 5899988765545689999999999999999999999999999999999995 56889999999996543
Q ss_pred ccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 268 RTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 268 ~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
.... ...++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+.+..
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 215 (260)
T cd05070 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 215 (260)
T ss_pred CcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 2211 1234567999999988899999999999999999999 8999987665554443
No 280
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.1e-35 Score=321.97 Aligned_cols=252 Identities=23% Similarity=0.417 Sum_probs=202.9
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.|....+||+|+||.||++.+..+++.||||++.... .....+.+|+.+++.+ .|+||++++++|...+..+
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~~~ 93 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-------QHENVVEMYNSYLVGDELW 93 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc-------CCcchhheeeEEEeCCEEE
Confidence 4444567999999999999999999999999986432 3445678899999888 5899999999999999999
Q ss_pred EEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+.+ +|.+++.. ..+++..++.++.||+.||+|||+.||+|+||||+||+++ .++.++|+|||++....
T Consensus 94 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~ 167 (292)
T cd06657 94 VVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVS 167 (292)
T ss_pred EEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccceecc
Confidence 99999985 67766543 2489999999999999999999999999999999999994 56789999999885433
Q ss_pred cc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhc
Q 002401 268 RT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNT 344 (927)
Q Consensus 268 ~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~ 344 (927)
.. .....++..|+|||.+.+..++.++|||||||++|+|++|..||.+....+.+..+...+. +.
T Consensus 168 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~---~~--------- 235 (292)
T cd06657 168 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PK--------- 235 (292)
T ss_pred cccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC---cc---------
Confidence 21 2234678899999999888899999999999999999999999987665544433322110 00
Q ss_pred chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHH
Q 002401 345 SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRL 424 (927)
Q Consensus 345 ~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~ 424 (927)
. .....++.
T Consensus 236 ------~-----------------------------------------------------------------~~~~~~~~ 244 (292)
T cd06657 236 ------L-----------------------------------------------------------------KNLHKVSP 244 (292)
T ss_pred ------c-----------------------------------------------------------------CCcccCCH
Confidence 0 00001234
Q ss_pred HHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 425 ALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 425 ~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
.+.+||.+||..||.+||++.|+|+||||....
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 678999999999999999999999999998764
No 281
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4e-35 Score=309.80 Aligned_cols=194 Identities=26% Similarity=0.403 Sum_probs=163.5
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
+.||+|+||.||+|++..+++.||+|++... ......+.+|+++++.+ +|+||+++++++.....++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~lv~e 73 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-------SHPNIVRLIGVCTQKQPIYIVME 73 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-------CCCCcceEEEEEcCCCCeEEEEe
Confidence 3699999999999999999999999998743 34456788899999988 58999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccce
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY 271 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~ 271 (927)
|+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||++........
T Consensus 74 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~ 149 (252)
T cd05084 74 LVQGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVY 149 (252)
T ss_pred eccCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCcccccccc
Confidence 997 58888876542 4589999999999999999999999999999999999994 567899999999864332211
Q ss_pred ee-----ccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002401 272 SY-----IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEF 319 (927)
Q Consensus 272 ~~-----~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~ 319 (927)
.. ..+..|+|||.+.+..++.++||||||||+|||++ |..||......
T Consensus 150 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~ 203 (252)
T cd05084 150 ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ 203 (252)
T ss_pred cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH
Confidence 11 12346999999988899999999999999999997 88999655443
No 282
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.8e-35 Score=313.74 Aligned_cols=206 Identities=25% Similarity=0.411 Sum_probs=176.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh-hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~-~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.+|++.++||.|+||.||+|.+.. ++.||+|+++.... ....+..|+.+++.+ .|+||+++++++...+.+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~ 77 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL-------RHKHLISLFAVCSVGEPV 77 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC-------CCcchhheeeeEecCCCe
Confidence 579999999999999999999887 88899999986543 456778899999888 589999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
++||||+. ++|.+++.......+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||.+...
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~ 154 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLI 154 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhc
Confidence 99999997 5999999876556689999999999999999999999999999999999994 6688999999999654
Q ss_pred cccce---eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 267 DRTVY---SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 267 ~~~~~---~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
..... ...++..|+|||++....++.++|||||||++|+|++ |+.||...+..+.+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05148 155 KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI 217 (261)
T ss_pred CCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 33221 2234567999999988899999999999999999998 89999877655555443
No 283
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-36 Score=342.47 Aligned_cols=252 Identities=26% Similarity=0.403 Sum_probs=209.1
Q ss_pred ccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 106 ~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.+.+.|++...||.|+|+.|-.|.+..+++..++|++.+.. .+..+|+.++.... +|+||+++++++.+..
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~------~h~niv~~~~v~~~~~ 389 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVR------DHPNIVKSHDVYEDGK 389 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhc------CCCcceeecceecCCc
Confidence 34689999999999999999999999999999999998762 23446887777774 5999999999999999
Q ss_pred eeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
+.|+|||++.| -|++-+.... ....++..|+++|+.||.|||++|||||||||+|||+. ...+.|+|+|||.++
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWS 464 (612)
T ss_pred eeeeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhh
Confidence 99999999986 4555554433 33377888999999999999999999999999999995 467899999999998
Q ss_pred cccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhc
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNT 344 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~ 344 (927)
.......+.+-|..|.|||++....|+.++||||||++||+||+|+.||...... ..|...++ .++
T Consensus 465 ~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~-~~~---------- 530 (612)
T KOG0603|consen 465 ELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQ-MPK---------- 530 (612)
T ss_pred hCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhc-CCc----------
Confidence 8777766678899999999999889999999999999999999999999765544 12222222 100
Q ss_pred chhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHH
Q 002401 345 SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRL 424 (927)
Q Consensus 345 ~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~ 424 (927)
....+++
T Consensus 531 -------------------------------------------------------------------------~s~~vS~ 537 (612)
T KOG0603|consen 531 -------------------------------------------------------------------------FSECVSD 537 (612)
T ss_pred -------------------------------------------------------------------------cccccCH
Confidence 0023556
Q ss_pred HHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 425 ALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 425 ~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
.++|||++||++||.+|+++.|++.||||...+.
T Consensus 538 ~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t 571 (612)
T KOG0603|consen 538 EAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPT 571 (612)
T ss_pred HHHHHHHHhccCChhhCcChhhhccCcchhcCCC
Confidence 8999999999999999999999999999955543
No 284
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.5e-35 Score=308.91 Aligned_cols=207 Identities=26% Similarity=0.358 Sum_probs=176.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.++|++.++||+|+||.||+|.+. ..+.||||++.........+.+|+.+++.+ .|+||+++++++.....+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKL-------RHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhC-------CCCCEeeeeeeeecCCce
Confidence 379999999999999999999875 457799999987666667788999999988 589999999999998999
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
++||||+. ++|.+++.......+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||++...
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLI 153 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceec
Confidence 99999997 5898888776545689999999999999999999999999999999999994 6689999999998654
Q ss_pred cccc----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 267 DRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 267 ~~~~----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
.... .....+..|+|||.+.+..++.++|||||||++|+|++ |+.||.+....+.+..+
T Consensus 154 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05034 154 EDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV 217 (261)
T ss_pred cchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 3211 11223467999999998899999999999999999998 99999877665554443
No 285
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.8e-35 Score=320.48 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=205.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
..|++.+.||+|+||.||++++..+++.||||++... ......+.+|+++++.+ +|+||+++++++...
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~ 97 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-------KHPNSIEYKGCYLRE 97 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-------CCCCEEEEEEEEeeC
Confidence 5688899999999999999999999999999998743 23345677899999888 589999999999999
Q ss_pred ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 185 ~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
...+|||||+.++|.+++.... ..+++..+..++.||+.||.|||+++|+|+||+|+||+++ .++.+||+|||++.
T Consensus 98 ~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~~ 173 (317)
T cd06635 98 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSAS 173 (317)
T ss_pred CeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCCEEEecCCCcc
Confidence 9999999999999888776543 4689999999999999999999999999999999999994 56889999999986
Q ss_pred cccccceeeccCCCCCCcchhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~---~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
.... .....++..|+|||++. ...++.++|||||||++|||++|+.||........+..+..... ++
T Consensus 174 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~------- 243 (317)
T cd06635 174 IASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PT------- 243 (317)
T ss_pred ccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC--CC-------
Confidence 4432 23446788999999984 34688999999999999999999999976554444333322100 00
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
+ ....
T Consensus 244 ---------------------------------------------------~------------------------~~~~ 248 (317)
T cd06635 244 ---------------------------------------------------L------------------------QSNE 248 (317)
T ss_pred ---------------------------------------------------C------------------------CCcc
Confidence 0 0001
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.+..+.+||.+||..||.+|||+.|+++|+|+...
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 23468899999999999999999999999999754
No 286
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-36 Score=309.37 Aligned_cols=197 Identities=24% Similarity=0.360 Sum_probs=169.6
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc-
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR- 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~- 185 (927)
.+||+|.++||+|+|+.||+++...+++.+|+|++.... ...+.+++|++..+++ +||||++++++...+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-------~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF-------NSPNVLRLVDHQLREEK 92 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh-------CCcchHHHHHHHHHhhc
Confidence 379999999999999999999999999999999997543 6678899999999999 5799999998876543
Q ss_pred ----eeEEEEeccc-chhHHHHHhhccC--CCCHHHHHHHHHHHHHHHhhhccCC--eeeccCCCCCEEEeecCCCCeEE
Q 002401 186 ----HLCICFELLD-SNLYELIKINHFR--GLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 186 ----~l~LVmEy~~-GsL~dlL~~~~~~--~L~e~~i~~i~~QIl~aL~yLHs~g--IVHrDLKPeNILL~~~~~~g~IK 256 (927)
..||+++|.. |+|.+.+.....+ .++|.++..|+.+|++||++||+.. ++||||||.|||++ +.+.++
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~v 169 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPV 169 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceE
Confidence 4999999986 7899988776533 4999999999999999999999998 99999999999995 578999
Q ss_pred EeecCCcccccccce------------eeccCCCCCCcchhcCC---CCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 257 IIDFGSACTEDRTVY------------SYIQSRYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 257 L~DFGlA~~~~~~~~------------~~~gT~~Y~APEvl~~~---~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
|.|||.++....... ....|..|+|||++.-. ..+.++|||||||+||+|+.|..||.
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe 242 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE 242 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence 999999965432211 22458889999999654 57789999999999999999999993
No 287
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.4e-35 Score=313.84 Aligned_cols=205 Identities=24% Similarity=0.392 Sum_probs=170.0
Q ss_pred CceEEEEEeccCCceeEEEeec----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWD----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.+|++.++||+|+||+||+|.. ..+++.||+|.++.. ......+.+|+.+++.+ .|+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~ 77 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-------HHPNIVCLLGVVT 77 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-------CCCCeeeEEEEEe
Confidence 5789999999999999999974 345678999999743 23345678899999988 5899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhc---------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEE
Q 002401 183 CQRHLCICFELLD-SNLYELIKINH---------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILL 246 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~---------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL 246 (927)
.....|+||||+. ++|.+++.... ...+++..+..++.||+.||+|||+++|+||||||+|||+
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili 157 (283)
T cd05090 78 QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI 157 (283)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE
Confidence 9999999999998 58888875332 1247889999999999999999999999999999999999
Q ss_pred eecCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 247 CTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 247 ~~~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
+ .+..+||+|||++...... .....++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus 158 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~ 234 (283)
T cd05090 158 G---EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE 234 (283)
T ss_pred c---CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 5 5678999999999653221 122334567999999988889999999999999999998 999998766544
Q ss_pred HHH
Q 002401 321 LLR 323 (927)
Q Consensus 321 ~l~ 323 (927)
...
T Consensus 235 ~~~ 237 (283)
T cd05090 235 VIE 237 (283)
T ss_pred HHH
Confidence 433
No 288
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=8.8e-35 Score=306.12 Aligned_cols=201 Identities=30% Similarity=0.431 Sum_probs=172.4
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+|++.++||+|+||.||++++..+++.+|||+++.. ......+.+|+++++.+ .|+||+++++++.....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~ 73 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-------NHPNIISYKEAFLDGNK 73 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-------CCCCchhhhhhhccCCE
Confidence 588999999999999999999999999999999753 23345667888888888 48999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 187 LCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.|+||||+. ++|.+++.... ...+++..++.++.||+.||+|||+.||+|+||+|+||+++ .++.+||+|||++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~ 150 (256)
T cd08530 74 LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGIS 150 (256)
T ss_pred EEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccch
Confidence 999999997 57888776532 24589999999999999999999999999999999999995 4678999999999
Q ss_pred cccccc-ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 264 CTEDRT-VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 264 ~~~~~~-~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
...... .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 208 (256)
T cd08530 151 KVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208 (256)
T ss_pred hhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 654332 223457889999999998899999999999999999999999997766543
No 289
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.2e-35 Score=306.79 Aligned_cols=200 Identities=27% Similarity=0.403 Sum_probs=170.7
Q ss_pred EEeccCCceeEEEeeccCC---CeEEEEEEEeCChhh--HHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQPAY--YQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~t---g~~VAIKiik~~~~~--~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
++||+|+||.||+|.+... +..||||+++..... .+.+.+|+++++.+ .|+||+++++++.....++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~~~~~l 73 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-------GHPNVVRLLGVCTEEEPLYL 73 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-------CCCChheeeeeecCCCceEE
Confidence 4699999999999998866 889999999865332 56788899999988 48999999999999999999
Q ss_pred EEeccc-chhHHHHHhhc-------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 190 CFELLD-SNLYELIKINH-------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 190 VmEy~~-GsL~dlL~~~~-------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
||||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||
T Consensus 74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~l~dfg 150 (262)
T cd00192 74 VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVKISDFG 150 (262)
T ss_pred EEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEEEcccc
Confidence 999995 78999887752 25699999999999999999999999999999999999994 56899999999
Q ss_pred Cccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 262 SACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 262 lA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
.+...... .....++..|+|||.+....++.++|||||||++|||++ |..||......+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~ 219 (262)
T cd00192 151 LSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEY 219 (262)
T ss_pred cccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99754432 223456788999999998899999999999999999999 6999987765544443
No 290
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=6.1e-35 Score=310.73 Aligned_cols=202 Identities=21% Similarity=0.329 Sum_probs=165.2
Q ss_pred eEEEEEeccCCceeEEEeeccC---CCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAE---MNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~---tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
|++.+.||+|+||.||+|.... +++.||||+++.+ ......+.+|+++++.+ +|+||+++++++...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~ 73 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-------DHPNVMKLIGVCFEA 73 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-------CCCCeeeEEeeeccC
Confidence 5688999999999999998654 3478999999854 23445778899998888 589999999988765
Q ss_pred ce------eEEEEeccc-chhHHHHHhhc----cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC
Q 002401 185 RH------LCICFELLD-SNLYELIKINH----FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 185 ~~------l~LVmEy~~-GsL~dlL~~~~----~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g 253 (927)
.. .++||||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+||+++ +++
T Consensus 74 ~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~---~~~ 150 (273)
T cd05035 74 SSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDM 150 (273)
T ss_pred CccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC---CCC
Confidence 54 799999998 58877775432 23589999999999999999999999999999999999994 668
Q ss_pred eEEEeecCCcccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002401 254 EIKIIDFGSACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL 322 (927)
Q Consensus 254 ~IKL~DFGlA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l 322 (927)
.+||+|||++........ ....+..|+|||.+....++.++|||||||++|||++ |..||.+....+.+
T Consensus 151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05035 151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY 225 (273)
T ss_pred eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 999999999865432211 1234567999999988899999999999999999999 89999776654443
No 291
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=7e-35 Score=311.82 Aligned_cols=206 Identities=23% Similarity=0.356 Sum_probs=171.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCC-----CeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEM-----NSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~t-----g~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
.++|++.+.||+|+||.||++.+... +..||||++.... .....+.+|+.+|+.+ +|+||++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~ 77 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-------NCHHVVRLLGV 77 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-------CCCceeEEEEE
Confidence 36899999999999999999987643 4789999987542 3345677888988887 58999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhc--------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINH--------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK 251 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~--------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~ 251 (927)
+......++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+++|+||||||+|||++ .
T Consensus 78 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~ 154 (277)
T cd05032 78 VSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---E 154 (277)
T ss_pred EcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---C
Confidence 999999999999997 68888886532 12368889999999999999999999999999999999994 6
Q ss_pred CCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 252 PAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 252 ~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+...
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 232 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK 232 (277)
T ss_pred CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence 688999999998643221 122345678999999988889999999999999999998 999998766555443
No 292
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-36 Score=314.23 Aligned_cols=255 Identities=27% Similarity=0.417 Sum_probs=210.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++.+++..||.|+-|+||+++.+.++..+|||.+.+. ....++++..+.++..- .++|.||+.+++|..+..
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s------~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS------HDCPYIVQCFGYFITNTD 165 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc------cCCCeeeeeeeEEeeCch
Confidence 5667788899999999999999999999999999864 33344555555555444 368999999999999999
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
++|.||.|...+..+++.-. +.++|..+-++...++.||.||.+ ++|||||+||+|||+ ++.|.|||||||.+-.
T Consensus 166 V~IcMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 166 VFICMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGR 241 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccce
Confidence 99999999987777776654 679999999999999999999985 589999999999999 5889999999999954
Q ss_pred c--cccceeeccCCCCCCcchhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCCChHHHH
Q 002401 266 E--DRTVYSYIQSRYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGA-SEFDLLRRMIRILGAQPPDYVLK 339 (927)
Q Consensus 266 ~--~~~~~~~~gT~~Y~APEvl~~~---~ys~ksDIWSLG~ILyELlTG~~PF~g~-s~~d~l~~I~~~lG~~PP~~~l~ 339 (927)
. ........|.+.|||||.+.-. .|+.++||||||+.|+||.||..||.+. .+++.+.+|... .||.-
T Consensus 242 lvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~---ePP~L--- 315 (391)
T KOG0983|consen 242 LVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE---EPPLL--- 315 (391)
T ss_pred eecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc---CCCCC---
Confidence 3 3344556889999999999644 6999999999999999999999999874 567777776551 22200
Q ss_pred HhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhh
Q 002401 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (927)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e 419 (927)
| ..
T Consensus 316 ------------------------------------------------------------------~-----------~~ 318 (391)
T KOG0983|consen 316 ------------------------------------------------------------------P-----------GH 318 (391)
T ss_pred ------------------------------------------------------------------C-----------cc
Confidence 0 01
Q ss_pred hhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 420 ~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
..+++.|++|+..||..|+.+||.-.++|+|||+...
T Consensus 319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 319 MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 1245789999999999999999999999999999863
No 293
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.5e-35 Score=315.96 Aligned_cols=196 Identities=24% Similarity=0.421 Sum_probs=166.6
Q ss_pred ceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCCh-----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQP-----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~---~tg~~VAIKiik~~~-----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
.|++.+.||+|+||.||+|++. .+++.||+|+++... ...+.+.+|+++|+.+. +|+||++++++|
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~~i~~~~~~~ 74 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR------QSPFLVTLHYAF 74 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc------cCCChhceeeEe
Confidence 4889999999999999999874 478999999997532 23456678999999885 489999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
..+..+|+||||+. ++|.+++... ..+++..+..++.||++||.|||+.+|+||||||+|||++ .++.+||+||
T Consensus 75 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~df 149 (290)
T cd05613 75 QTDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDF 149 (290)
T ss_pred ecCCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeC
Confidence 99999999999998 5888888764 3689999999999999999999999999999999999994 5689999999
Q ss_pred CCccccccc----ceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 261 GSACTEDRT----VYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 261 GlA~~~~~~----~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
|++...... .....++..|+|||.+... .++.++|||||||++|+|++|..||...
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 211 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcC
Confidence 998654321 2234678899999998764 4788999999999999999999999643
No 294
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5e-35 Score=321.53 Aligned_cols=200 Identities=24% Similarity=0.381 Sum_probs=167.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe----EEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS----FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~----~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.+|++.+.||+|+||.||+|++..+++ .||||+++.. ....+.+.+|+.+++.+ .|+||+++++++.
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~niv~~~g~~~ 79 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGICL 79 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEc
Confidence 689999999999999999998766555 4899998743 34456788899999888 5899999999987
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
.. ..++|+||+. |+|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++ .++.+||+|||
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG 154 (316)
T cd05108 80 TS-TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFG 154 (316)
T ss_pred CC-CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEcccc
Confidence 64 5779999987 68999887654 4588999999999999999999999999999999999994 66789999999
Q ss_pred Ccccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 262 SACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 262 lA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
++........ ....+..|+|||++.+..++.++|||||||++|||++ |..||.+....+
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~ 219 (316)
T cd05108 155 LAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 219 (316)
T ss_pred ccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9975432211 1223567999999999999999999999999999997 999997765443
No 295
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6e-35 Score=320.09 Aligned_cols=252 Identities=24% Similarity=0.387 Sum_probs=204.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
+.|.+.+.||+|+||.||++++..+++.||||.+... ......+.+|+++++.+ +|+||+++++++...
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~ 87 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-------RHPNTIQYRGCYLRE 87 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-------CCCCcccEEEEEEcC
Confidence 5788889999999999999999999999999998632 23345677899999988 589999999999999
Q ss_pred ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 185 ~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
...++||||+.++|.+++.... ..+++..++.++.||+.||.|||+++|+|+||||+|||++ .++.+||+|||++.
T Consensus 88 ~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~ 163 (308)
T cd06634 88 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSAS 163 (308)
T ss_pred CeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccce
Confidence 9999999999998888776543 4589999999999999999999999999999999999994 56889999999986
Q ss_pred cccccceeeccCCCCCCcchhcC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLLG---YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~~---~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
..... ....++..|+|||++.. ..++.++|||||||++|+|++|..||...+..+.+..+..... +.
T Consensus 164 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~------- 233 (308)
T cd06634 164 IMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PA------- 233 (308)
T ss_pred eecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC--CC-------
Confidence 54332 34467889999999853 4688899999999999999999999966544333332221000 00
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
+ ....
T Consensus 234 ---------------------------------------------------~------------------------~~~~ 238 (308)
T cd06634 234 ---------------------------------------------------L------------------------QSGH 238 (308)
T ss_pred ---------------------------------------------------c------------------------Cccc
Confidence 0 0011
Q ss_pred hHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
++..+.+||++||..+|++|||++++++|||+...
T Consensus 239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred ccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 23468899999999999999999999999999875
No 296
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.7e-35 Score=315.35 Aligned_cols=206 Identities=27% Similarity=0.429 Sum_probs=170.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCC-----CeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEM-----NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~t-----g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|++.+.||+|+||.||++..... ...||+|+++.. ......+.+|+.+++.+. .|+||+++++++
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~i~~~~~~~ 85 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG------KHKNIINLLGVC 85 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc------CCCCeeeEEEEE
Confidence 6899999999999999999987643 378999999753 233456788999998883 389999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhh--------------ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEE
Q 002401 182 VCQRHLCICFELLD-SNLYELIKIN--------------HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILL 246 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~--------------~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL 246 (927)
...+.+++||||+. ++|.+++... ....+++..++.++.||+.||+|||+++|+|+||||+|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 99999999999997 6888888652 23458999999999999999999999999999999999999
Q ss_pred eecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 247 CTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 247 ~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
+ .++.+||+|||++....... ....++..|+|||++.+..++.++||||||||+|||++ |..||......+
T Consensus 166 ~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 166 T---EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred c---CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 4 67899999999997543221 11223467999999988899999999999999999997 999998766544
Q ss_pred HHH
Q 002401 321 LLR 323 (927)
Q Consensus 321 ~l~ 323 (927)
...
T Consensus 243 ~~~ 245 (293)
T cd05053 243 LFK 245 (293)
T ss_pred HHH
Confidence 433
No 297
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.2e-36 Score=340.31 Aligned_cols=252 Identities=26% Similarity=0.406 Sum_probs=213.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
...|.++++||+|.|++|.++++..++..||||+|.+. ....+...+|+++|+.| +|||||+++.+.+.+
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-------~HPnIvkl~~v~~t~ 127 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-------NHPNIVKLFSVIETE 127 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-------CCcceeeeeeeeeec
Confidence 47899999999999999999999999999999999864 34445578999999999 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
..+|+||||+. |.+++++.... .+.+.+++.++.|++.|++|||+++|||||||.+||||+ .+..|||+|||++
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~---~~mnikIaDfgfS 202 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD---ENMNIKIADFGFS 202 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc---cccceeeeccccc
Confidence 99999999997 68999998764 577799999999999999999999999999999999994 5667999999999
Q ss_pred cccc--ccceeeccCCCCCCcchhcCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 264 CTED--RTVYSYIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 264 ~~~~--~~~~~~~gT~~Y~APEvl~~~~ys-~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
.... ....+.||++.|.|||++.+..|+ +.+|+||+|++||.|+.|..||.+.+-.++..+.+..
T Consensus 203 ~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g------------ 270 (596)
T KOG0586|consen 203 TFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG------------ 270 (596)
T ss_pred eeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee------------
Confidence 6543 445678999999999999999876 7999999999999999999999886654433222110
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
.|++ | -
T Consensus 271 ----------------------------k~rI---------------------------------p-------------~ 276 (596)
T KOG0586|consen 271 ----------------------------KYRI---------------------------------P-------------F 276 (596)
T ss_pred ----------------------------eecc---------------------------------c-------------c
Confidence 0000 0 0
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
-++-++.+||++||..+|.+|.++++++.|.|+....
T Consensus 277 ~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 277 YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred eeechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence 1223678999999999999999999999999998653
No 298
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=319.94 Aligned_cols=281 Identities=32% Similarity=0.505 Sum_probs=222.3
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-----c
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-----R 185 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-----~ 185 (927)
.+.||.|+||.||.+.|..+++.||+|++.+- -...+.+.+|+++|..++ |.|++..+++.+-. .
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk-------HdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR-------HDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc-------cccHHHHHHhcCCCCchHHH
Confidence 36799999999999999999999999998753 344567889999999985 78999998877643 3
Q ss_pred eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 186 ~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
++|+|.|+|..+|..+|..- ..++.+.++-+++||++||+|||+.+|.||||||.|+|+ +.+..+||||||+|+.
T Consensus 131 EiYV~TELmQSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 131 ELYVLTELMQSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLART 205 (449)
T ss_pred HHHHHHHHHHhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccc
Confidence 68999999999999887665 369999999999999999999999999999999999999 4778999999999986
Q ss_pred ccc----cceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHH
Q 002401 266 EDR----TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (927)
Q Consensus 266 ~~~----~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~ 340 (927)
.+. .+...+-|.+|+|||++.+. .|+.++||||+|||+.||+..+.+|...+..++++.|.+.+| .|..+.++.
T Consensus 206 ee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLG-TPs~EaMr~ 284 (449)
T KOG0664|consen 206 WDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLG-TPSQEAMKY 284 (449)
T ss_pred cchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhC-CCcHHHHHH
Confidence 543 23445678999999999987 799999999999999999999999999999999999999999 666554442
Q ss_pred hhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhh
Q 002401 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (927)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~ 420 (927)
+..-.+ ..-.+...++. .+..+. . +....
T Consensus 285 ACEGAk------------------------------~H~LR~~~k~P---------s~~vLY-------t-----lsS~~ 313 (449)
T KOG0664|consen 285 ACEGAK------------------------------NHVLRAGLRAP---------DTQRLY-------K-----IASPD 313 (449)
T ss_pred HhhhhH------------------------------HHhhccCCCCC---------Ccccee-------e-----ecCCc
Confidence 211000 00001111110 000000 0 11111
Q ss_pred hhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 421 ~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
....+..+++.+||.+||++|++.++++.|+|+.+.++
T Consensus 314 ~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 314 DKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRL 351 (449)
T ss_pred ccchHHHHHHHHHhCCCCcccccHhhhcccccccccce
Confidence 22346789999999999999999999999999988764
No 299
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.9e-35 Score=311.33 Aligned_cols=248 Identities=29% Similarity=0.434 Sum_probs=197.2
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
+|.+.++||+|+||.||++++..++..+++|+++.. ......+..|+.+++.+ +|+||+++++++..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~ 73 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-------DHPAIVKFHASFLE 73 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-------CCCcHHHHHHHHhc
Confidence 689999999999999999999888777777777631 12234566788888877 58999999999999
Q ss_pred cceeEEEEecccc-hhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 184 QRHLCICFELLDS-NLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 184 ~~~l~LVmEy~~G-sL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
....|+||||+.+ +|.+++... ....+++..++.++.||+.||.|||+++|+|+||||+||+++ ++.+||+||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~ 149 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDF 149 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeeccc
Confidence 9999999999984 777776542 234699999999999999999999999999999999999994 356999999
Q ss_pred CCcccccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHH
Q 002401 261 GSACTEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV 337 (927)
Q Consensus 261 GlA~~~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~ 337 (927)
|++..... ......++..|+|||.+.+..++.++||||||+++|+|++|..||...........+.. + ..+.
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~-~~~~-- 224 (260)
T cd08222 150 GVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--G-PTPS-- 224 (260)
T ss_pred CceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--C-CCCC--
Confidence 99864322 12234578889999999888899999999999999999999999976554333322211 1 0000
Q ss_pred HHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhh
Q 002401 338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS 417 (927)
Q Consensus 338 l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~ 417 (927)
T Consensus 225 -------------------------------------------------------------------------------- 224 (260)
T cd08222 225 -------------------------------------------------------------------------------- 224 (260)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCc
Q 002401 418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV 453 (927)
Q Consensus 418 ~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf 453 (927)
....++.++.+||++||..||++||+++|+|+||||
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 225 LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 001123478899999999999999999999999997
No 300
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.9e-35 Score=327.10 Aligned_cols=200 Identities=29% Similarity=0.428 Sum_probs=165.4
Q ss_pred CceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~-----~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|++.++||+|+||.||+|++. .+++.||+|+++.. ....+.+..|+.+++++. +|+||++++++|
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~------~h~niv~~~~~~ 80 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG------HHLNVVNLLGAC 80 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc------cCcchhheeeeE
Confidence 68999999999999999999743 34578999999753 233456778999998884 489999999988
Q ss_pred eec-ceeEEEEeccc-chhHHHHHhhc-----------------------------------------------------
Q 002401 182 VCQ-RHLCICFELLD-SNLYELIKINH----------------------------------------------------- 206 (927)
Q Consensus 182 ~~~-~~l~LVmEy~~-GsL~dlL~~~~----------------------------------------------------- 206 (927)
... ..+++||||+. ++|.+++....
T Consensus 81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 654 57899999998 58888775432
Q ss_pred ------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc-----eeecc
Q 002401 207 ------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQ 275 (927)
Q Consensus 207 ------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~g 275 (927)
...+++..+..++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++....... ....+
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~ 237 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARL 237 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCC
Confidence 12588999999999999999999999999999999999995 56789999999997543211 12344
Q ss_pred CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002401 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS 317 (927)
Q Consensus 276 T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s 317 (927)
+..|+|||++.+..++.++|||||||+||||++ |..||.+..
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~ 280 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ 280 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC
Confidence 667999999999999999999999999999998 999997643
No 301
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.8e-35 Score=318.98 Aligned_cols=204 Identities=25% Similarity=0.325 Sum_probs=168.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe--EEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS--FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~--~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||+|++..++. .+|+|.++.. ......+.+|++++.++. +|+||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~------~h~~iv~~~~~~~~~ 80 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG------HHPNIINLLGACEHR 80 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc------CCCCcceEEEEECCC
Confidence 689999999999999999999877765 4577777642 334456778999999884 489999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec
Q 002401 185 RHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS 249 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~ 249 (927)
+.+|+||||+. ++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~-- 158 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-- 158 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec--
Confidence 99999999997 68988887542 12478999999999999999999999999999999999994
Q ss_pred CCCCeEEEeecCCccccccccee--eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 250 VKPAEIKIIDFGSACTEDRTVYS--YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 250 ~~~g~IKL~DFGlA~~~~~~~~~--~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
.++.+||+|||++......... ...+..|+|||++.+..++.++|||||||++|||+| |..||...+..+.
T Consensus 159 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 232 (303)
T cd05088 159 -ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 232 (303)
T ss_pred -CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH
Confidence 6678999999998643222111 123557999999988889999999999999999998 9999976654443
No 302
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.1e-34 Score=303.36 Aligned_cols=198 Identities=25% Similarity=0.390 Sum_probs=171.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||+|.+..+++.||+|.++.. ....+.+.+|+++++++ .|++|+++++++...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-------~~~~i~~~~~~~~~~ 74 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-------DHPNVIKYLASFIEN 74 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-------CCCCeeeeeeeeecC
Confidence 5899999999999999999999999999999998632 23356778899999988 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 185 RHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
+..++||||+. ++|.+++.... ...+++..++.++.||+.||+|||+.||+|+||||+||+++ .++.++|+|||
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~~ 151 (267)
T cd08224 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEeccc
Confidence 99999999998 58888876532 24589999999999999999999999999999999999994 56889999999
Q ss_pred Cccccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 262 SACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 262 lA~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
++...... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08224 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred eeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence 98643321 23346788899999999889999999999999999999999999643
No 303
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-34 Score=316.40 Aligned_cols=203 Identities=26% Similarity=0.391 Sum_probs=168.5
Q ss_pred CceEEEEEeccCCceeEEEeeccC-------CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-------MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-------tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
++|.+.+.||+|+||.||+|++.. +...||+|+++.. ......+.+|+++++.+. .|+||+++++
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~------~h~~i~~~~~ 91 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG------KHKNIINLLG 91 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc------CCCCEeeEEE
Confidence 689999999999999999997543 2357999999853 234456778999999884 3899999999
Q ss_pred EEeecceeEEEEeccc-chhHHHHHhhcc--------------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 180 YFVCQRHLCICFELLD-SNLYELIKINHF--------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~-GsL~dlL~~~~~--------------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
++...+.+|+||||+. ++|.+++..... ..+++.+++.++.||+.||+|||++||+||||||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 9999999999999997 589999876431 2488899999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002401 245 LLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE 318 (927)
Q Consensus 245 LL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~ 318 (927)
|++ .++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 172 ll~---~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 172 LVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred EEc---CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 994 56889999999986543211 11123467999999998899999999999999999998 8899976554
Q ss_pred HH
Q 002401 319 FD 320 (927)
Q Consensus 319 ~d 320 (927)
.+
T Consensus 249 ~~ 250 (307)
T cd05098 249 EE 250 (307)
T ss_pred HH
Confidence 33
No 304
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.7e-34 Score=306.45 Aligned_cols=199 Identities=28% Similarity=0.484 Sum_probs=169.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.+|++.+.||+|+||.||++++..+++.||+|++... ......+.+|+++++.+ .|+||+++++++.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-------~h~~i~~~~~~~~ 74 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-------RHDRIVQYYGCLR 74 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-------CCCCcceEEEEEE
Confidence 4799999999999999999999999999999998532 23345677899999998 4899999999987
Q ss_pred ec--ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 183 CQ--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 183 ~~--~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
+. ..+++||||+. ++|.+++... ..+++..++.++.||+.||.|||+++|+|+||||+||+++ .++.++|+|
T Consensus 75 ~~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~d 149 (264)
T cd06653 75 DPEEKKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGD 149 (264)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECc
Confidence 64 46899999997 5788887654 3588999999999999999999999999999999999994 567899999
Q ss_pred cCCcccccc------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Q 002401 260 FGSACTEDR------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEF 319 (927)
Q Consensus 260 FGlA~~~~~------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~ 319 (927)
||++..... ......++..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 215 (264)
T cd06653 150 FGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM 215 (264)
T ss_pred cccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH
Confidence 999964321 122346788999999999888999999999999999999999999765433
No 305
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-34 Score=308.68 Aligned_cols=200 Identities=23% Similarity=0.321 Sum_probs=163.4
Q ss_pred EEEEEeccCCceeEEEeeccCCCe--EEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 112 IVKDLLGHGTFGQVAKCWDAEMNS--FVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 112 ~i~~~LG~GsfG~Vyka~d~~tg~--~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
.+.++||+|+||.||+|++..+++ .||||.++.. ....+.+.+|+++++.+ +|+||+++++++...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~ 74 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-------DHPNVMRLIGVCLQTVE 74 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-------CCCCcceEEEEEccCCc
Confidence 467899999999999999877765 6999998753 34456778899999888 589999999987532
Q ss_pred ----ceeEEEEeccc-chhHHHHHhhc----cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeE
Q 002401 185 ----RHLCICFELLD-SNLYELIKINH----FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI 255 (927)
Q Consensus 185 ----~~l~LVmEy~~-GsL~dlL~~~~----~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~I 255 (927)
...++||||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+
T Consensus 75 ~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~ 151 (272)
T cd05075 75 SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN---ENMNV 151 (272)
T ss_pred ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc---CCCCE
Confidence 25799999997 68887764332 23488999999999999999999999999999999999994 66889
Q ss_pred EEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 256 KIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 256 KL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
||+|||++....... .....+..|+|||.+.+..++.++|||||||++|||++ |..||.+....+.
T Consensus 152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 223 (272)
T cd05075 152 CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI 223 (272)
T ss_pred EECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999997543221 12234667999999999899999999999999999999 8999987655443
No 306
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.9e-34 Score=303.40 Aligned_cols=204 Identities=30% Similarity=0.447 Sum_probs=171.9
Q ss_pred eEEEEEeccCCceeEEEeeccCCC----eEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMN----SFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg----~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
+++.+.||.|+||.||++++...+ +.||+|+++.... ..+.+..|+.+++.+ +|+||+++++++...
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~ 73 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-------DHPNIVKLLGVCTEE 73 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-------CCCchheEEEEEcCC
Confidence 357789999999999999988766 8999999986543 466788899999988 489999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+..|+||||+. ++|.+++.......+++..++.++.||+.||+|||+++|+|+||||+||+++ .++.+||+|||++
T Consensus 74 ~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~ 150 (258)
T smart00219 74 EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLS 150 (258)
T ss_pred CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCc
Confidence 99999999997 5888888765533389999999999999999999999999999999999994 6679999999999
Q ss_pred ccccccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 264 CTEDRTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 264 ~~~~~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
........ ...++..|+|||.+....++.++|||||||++|+|++ |.+||...+..+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~ 216 (258)
T smart00219 151 RDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEY 216 (258)
T ss_pred eecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 65433211 1225678999999988889999999999999999998 8899977655444443
No 307
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.9e-34 Score=349.74 Aligned_cols=144 Identities=24% Similarity=0.409 Sum_probs=128.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|+++++||+|+||.||+|++..+++.||||+++.. ......+..|+.+++.+ .|+||+++++++...
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~Iv~~~~~~~~~ 76 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-------KSPFIVHLYYSLQSA 76 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-------CCCCcCeEEEEEEEC
Confidence 6899999999999999999999999999999999753 23345677888888877 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.++||||||+. ++|.+++... ..+++..++.|+.||+.||+|||.++||||||||+||||+ .++.+||+|||++
T Consensus 77 ~~~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL~DFGls 151 (669)
T cd05610 77 NNVYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKLTDFGLS 151 (669)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEEEeCCCC
Confidence 99999999996 5888888654 3589999999999999999999999999999999999994 5688999999987
Q ss_pred c
Q 002401 264 C 264 (927)
Q Consensus 264 ~ 264 (927)
+
T Consensus 152 ~ 152 (669)
T cd05610 152 K 152 (669)
T ss_pred c
Confidence 4
No 308
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.9e-34 Score=307.59 Aligned_cols=204 Identities=23% Similarity=0.344 Sum_probs=170.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCC---CeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~t---g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
++|++.+.||+|+||.||+|++..+ ...||||+++.. ......+.+|+.+++.+ +|+||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~ 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-------DHPNIIRLEGVVTK 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-------CCCCcceEeEEEec
Confidence 6899999999999999999987644 457999998753 33345678899999888 58999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+..++||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||+
T Consensus 77 ~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~ 152 (266)
T cd05033 77 SRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGL 152 (266)
T ss_pred CCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccch
Confidence 999999999997 58888886643 4689999999999999999999999999999999999994 668899999999
Q ss_pred cccccc--c-cee--eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 263 ACTEDR--T-VYS--YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 263 A~~~~~--~-~~~--~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
+..... . ... ...+..|+|||.+.+..++.++|||||||++|+|++ |..||......+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~ 219 (266)
T cd05033 153 SRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK 219 (266)
T ss_pred hhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH
Confidence 975431 1 111 123567999999998899999999999999999998 999997655544433
No 309
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-34 Score=308.78 Aligned_cols=198 Identities=24% Similarity=0.386 Sum_probs=170.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.+.||+|+||.||++++..+++.||||.+... ......+.+|+.+++.+ .|+||+++++++...
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~~~ 74 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-------NHPNVIKYYASFIED 74 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-------cCCchhhhhheeEeC
Confidence 5788999999999999999999999999999988642 23345677899999988 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 185 RHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
+.+++||||+. ++|.+++.... ...+++..++.++.||+.||+|||++||+|+||||+||+++ .++.++|+|||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg 151 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcch
Confidence 99999999998 48888776432 24589999999999999999999999999999999999994 56789999999
Q ss_pred Cccccccc---ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 262 SACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 262 lA~~~~~~---~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
++...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08229 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred hhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 98654322 22346788999999999889999999999999999999999999654
No 310
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.3e-34 Score=309.42 Aligned_cols=199 Identities=24% Similarity=0.361 Sum_probs=165.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe----EEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS----FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~----~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
++|+++++||+|+||+||+|++..+++ .||||+++.. ......+.+|+.+++.+ .|+||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~ 79 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-------GSPYVCRLLGICL 79 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-------CCCCCceEEEEEc
Confidence 789999999999999999998766665 4899998753 33455677888888877 5899999999987
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
. ...++||||+. |+|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||
T Consensus 80 ~-~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG 154 (279)
T cd05109 80 T-STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFG 154 (279)
T ss_pred C-CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCC
Confidence 5 45789999997 68988887643 4589999999999999999999999999999999999994 56789999999
Q ss_pred Ccccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002401 262 SACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEF 319 (927)
Q Consensus 262 lA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~ 319 (927)
++........ ...++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 218 (279)
T cd05109 155 LARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR 218 (279)
T ss_pred ceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9975432211 1123567999999998899999999999999999998 89999765443
No 311
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.3e-34 Score=304.26 Aligned_cols=203 Identities=22% Similarity=0.389 Sum_probs=170.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+|++.+.||+|+||.||++.+. .++.+|||+++........+.+|+++++.+ .|+||+++++++......|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKL-------SHPKLVQLYGVCTERSPIC 75 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhC-------CCCCeeeEEEEEccCCceE
Confidence 58999999999999999999875 366899999986555556788899999998 5899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.... ..++++.++.++.||+.+|+|||+++|+|+||||+||+++ .++.+||+|||++....
T Consensus 76 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVL 151 (256)
T ss_pred EEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecc
Confidence 9999998 47777776543 4589999999999999999999999999999999999994 66789999999986443
Q ss_pred ccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 268 RTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 268 ~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
.... ....+..|+|||++.+..++.++|||||||++|||++ |..||......+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~ 212 (256)
T cd05112 152 DDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVE 212 (256)
T ss_pred cCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 2211 1233567999999998899999999999999999998 999997665544433
No 312
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.6e-34 Score=311.58 Aligned_cols=205 Identities=28% Similarity=0.388 Sum_probs=171.3
Q ss_pred CceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~-----~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.+|.+.+.||+|+||.||+|++. .++..|++|.++... ...+.+.+|+++++.+ .|+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~ 77 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-------QHEHIVKFYGVCG 77 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-------CCCCcceEEEEEc
Confidence 68999999999999999999743 345679999987643 2345678899999888 5899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEe
Q 002401 183 CQRHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLC 247 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~ 247 (927)
..+.+++||||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 78 DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG 157 (291)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence 9999999999997 68988886542 13488999999999999999999999999999999999994
Q ss_pred ecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 248 TSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 248 ~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
.++.+||+|||++....... ....++..|+|||++.+..++.++||||||||+|||++ |..||...+..+.
T Consensus 158 ---~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 234 (291)
T cd05094 158 ---ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 234 (291)
T ss_pred ---cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 66899999999996543221 12345678999999999899999999999999999998 9999977665544
Q ss_pred HH
Q 002401 322 LR 323 (927)
Q Consensus 322 l~ 323 (927)
+.
T Consensus 235 ~~ 236 (291)
T cd05094 235 IE 236 (291)
T ss_pred HH
Confidence 33
No 313
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=9.7e-35 Score=305.19 Aligned_cols=192 Identities=30% Similarity=0.514 Sum_probs=167.1
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
||.|+||.||++.+..+++.||+|+++... .....+..|+++++.+ .|+||+++++.+..++.+|+|||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~~v~e 73 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-------NHPFIVKLHYAFQTEEKLYLVLE 73 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-------CCCcHHHHHHHeecCCeeEEEEe
Confidence 689999999999998889999999997543 2345778899999888 48999999999999999999999
Q ss_pred cc-cchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc---
Q 002401 193 LL-DSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--- 268 (927)
Q Consensus 193 y~-~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~--- 268 (927)
++ .++|.+++.... .+++..+..++.||++||.|||+.+++|+||||+||+++ ..+.++|+|||++.....
T Consensus 74 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~~~~~~~ 148 (250)
T cd05123 74 YAPGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGS 148 (250)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcceecccCCC
Confidence 99 578988887653 589999999999999999999999999999999999994 567899999999865433
Q ss_pred cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH
Q 002401 269 TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 269 ~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d 320 (927)
......++..|+|||.+.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 200 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE 200 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 2344567888999999988889999999999999999999999997665533
No 314
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.2e-34 Score=315.11 Aligned_cols=202 Identities=25% Similarity=0.377 Sum_probs=170.4
Q ss_pred CceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|.+.+.||+|+||.||++.+ ..++..||||+++.. ....+.+.+|+++++++. +|+||+++++++
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~~~~ 108 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG------NHENIVNLLGAC 108 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc------CCCCcceEEEEE
Confidence 6899999999999999999974 345668999998753 333456788999999883 489999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
...+.+|+||||+. ++|.+++.......+++.+++.++.||+.||+|||+++|+|+||||+|||++ ..+.+||+||
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~df 185 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDF 185 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCC
Confidence 99999999999997 6899888765444589999999999999999999999999999999999994 6678999999
Q ss_pred CCcccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002401 261 GSACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEF 319 (927)
Q Consensus 261 GlA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~ 319 (927)
|++........ ...++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~ 250 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD 250 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch
Confidence 99864332211 1234677999999998899999999999999999998 99999765543
No 315
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-34 Score=315.38 Aligned_cols=207 Identities=26% Similarity=0.410 Sum_probs=170.5
Q ss_pred CceEEEEEeccCCceeEEEeecc-------CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA-------EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~-------~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
++|++.++||+|+||.||+|++. .....||+|+++.. ......+..|+++++.+. +|+||+++++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~~ 85 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG------KHKNIINLLG 85 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc------CCCCeeeEEE
Confidence 68999999999999999999753 23557999998853 234456788999998883 4899999999
Q ss_pred EEeecceeEEEEeccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 180 YFVCQRHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
++...+.+|+||||+. ++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 9999999999999997 68988886642 13488999999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002401 245 LLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE 318 (927)
Q Consensus 245 LL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~ 318 (927)
|++ .++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus 166 ll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 166 LVT---EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EEc---CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 994 56789999999997543211 11123457999999998899999999999999999999 8999977665
Q ss_pred HHHHHH
Q 002401 319 FDLLRR 324 (927)
Q Consensus 319 ~d~l~~ 324 (927)
.+.+..
T Consensus 243 ~~~~~~ 248 (314)
T cd05099 243 EELFKL 248 (314)
T ss_pred HHHHHH
Confidence 544443
No 316
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-34 Score=310.02 Aligned_cols=204 Identities=29% Similarity=0.404 Sum_probs=169.6
Q ss_pred EEEEEeccCCceeEEEeecc----CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 112 IVKDLLGHGTFGQVAKCWDA----EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 112 ~i~~~LG~GsfG~Vyka~d~----~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++.+.||.|.||.||+|... ..+..|+||+++.. ....+.+.+|+++++++ +|+||+++++++...+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-------~h~ni~~~~g~~~~~~ 74 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-------RHPNIVKLYGFCIENE 74 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-------SBTTBE-EEEEEESSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-------cccccccccccccccc
Confidence 47789999999999999876 45678999999753 33467889999999998 4899999999999888
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+++||||+. ++|.+++.......+++..+..|+.||++||+|||+++|+|+||+++|||++ .++.+||+|||++.
T Consensus 75 ~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~ 151 (259)
T PF07714_consen 75 PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSR 151 (259)
T ss_dssp SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccc
Confidence 8999999998 7899999987556799999999999999999999999999999999999995 67899999999997
Q ss_pred ccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 265 TEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 265 ~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
..... .........|+|||.+....++.++||||||+++|||++ |+.||...+..+....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~ 218 (259)
T PF07714_consen 152 PISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL 218 (259)
T ss_dssp ETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 65211 112245667999999999899999999999999999999 78999877766655554
No 317
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.3e-34 Score=311.21 Aligned_cols=207 Identities=25% Similarity=0.386 Sum_probs=172.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCC----------------eEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCC
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMN----------------SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDRED 170 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg----------------~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~ 170 (927)
.+|+++++||+|+||.||+|.+..++ ..||+|++... ....+.+.+|+++++++ .
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-------~ 77 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-------S 77 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-------C
Confidence 68999999999999999998876543 56899998754 33456788899999998 4
Q ss_pred CCceeEEEEEEeecceeEEEEeccc-chhHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCC
Q 002401 171 KHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINH---------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLK 240 (927)
Q Consensus 171 HpnIVrl~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~---------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLK 240 (927)
|+||+++++++..++..++|||++. ++|.+++.... ...+++..++.++.||+.||+|||+++|+|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 78 DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 8999999999999999999999997 58888876543 1258999999999999999999999999999999
Q ss_pred CCCEEEeecCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh--CCCCC
Q 002401 241 PENILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL--GLPLF 313 (927)
Q Consensus 241 PeNILL~~~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT--G~~PF 313 (927)
|+||+++ ..+.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|||++ +..||
T Consensus 158 p~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 158 TRNCLVG---KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred hhceeec---CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 9999994 5589999999998643221 112344678999999998889999999999999999998 77888
Q ss_pred CCCCHHHHHHHH
Q 002401 314 PGASEFDLLRRM 325 (927)
Q Consensus 314 ~g~s~~d~l~~I 325 (927)
......+.+..+
T Consensus 235 ~~~~~~~~~~~~ 246 (296)
T cd05051 235 EHLTDQQVIENA 246 (296)
T ss_pred CCcChHHHHHHH
Confidence 766655544443
No 318
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.1e-34 Score=305.19 Aligned_cols=199 Identities=27% Similarity=0.418 Sum_probs=169.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
++|++.+.||+|+||.||++. .+++.||+|+++... ....+.+|+.+++.+ +|+||+++++++... ..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~-------~~~~i~~~~~~~~~~-~~~ 74 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKL-------HHKNLVRLLGVILHN-GLY 74 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhC-------CCCCcCeEEEEEcCC-CcE
Confidence 689999999999999999985 567889999997643 345678899999888 589999999998754 579
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.......+++..+..++.||+.||.|||++|++||||||+||+++ .++.+||+|||++....
T Consensus 75 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 75 IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARVGS 151 (254)
T ss_pred EEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCccceecc
Confidence 9999997 5999998776555689999999999999999999999999999999999994 56889999999986544
Q ss_pred ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 268 RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 268 ~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
........+..|+|||.+.+..++.++|||||||++|||++ |++||...+..+.
T Consensus 152 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 206 (254)
T cd05083 152 MGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV 206 (254)
T ss_pred ccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence 33333344567999999988899999999999999999997 9999977655443
No 319
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.7e-35 Score=313.79 Aligned_cols=207 Identities=23% Similarity=0.328 Sum_probs=169.5
Q ss_pred CceEEEEEeccCCceeEEEeeccC-----CCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-----MNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-----tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
.+|++.+.||+|+||.||+|.+.. .++.||||+++... ...+.+.+|+.++..+ +|+||+++++++
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-------~h~~iv~~~~~~ 77 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-------QHPNIVCLLGVV 77 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-------CCCCcCeEEEEE
Confidence 578889999999999999998654 35789999998543 2345677888888877 589999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEE
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILL 246 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL 246 (927)
......++++||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||+
T Consensus 78 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~ 157 (283)
T cd05091 78 TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV 157 (283)
T ss_pred cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe
Confidence 99999999999997 57888775321 1247888999999999999999999999999999999999
Q ss_pred eecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 247 CTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 247 ~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
. +++.+||+|||+++...... ....+++.|+|||.+....++.++|||||||++|||++ |..||.+....+
T Consensus 158 ~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 234 (283)
T cd05091 158 F---DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 234 (283)
T ss_pred c---CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 4 56789999999986532211 12234678999999988889999999999999999998 889998776655
Q ss_pred HHHHH
Q 002401 321 LLRRM 325 (927)
Q Consensus 321 ~l~~I 325 (927)
.+..+
T Consensus 235 ~~~~i 239 (283)
T cd05091 235 VIEMI 239 (283)
T ss_pred HHHHH
Confidence 54443
No 320
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.6e-34 Score=304.80 Aligned_cols=204 Identities=26% Similarity=0.386 Sum_probs=172.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.++|++.++||+|+||.||++.+. .+..||+|+++......+.+.+|+++++.+ +|+||+++++++.. ...
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-------QHDKLVKLHAVVTK-EPI 75 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhc-------CCCCcceEEEEEcC-CCe
Confidence 379999999999999999999754 455699999987665567788999999988 58999999999887 788
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
++||||+. ++|.+++.......+++..++.++.||+.||+|||+++++|+||||+||+++ ..+.+||+|||++...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~ 152 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVI 152 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCcceeec
Confidence 99999997 6899998775545688999999999999999999999999999999999994 6789999999998643
Q ss_pred cccc----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 267 DRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 267 ~~~~----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
.... ....++..|+|||++....++.++|||||||++|+|++ |+.||.+.+..+...
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~ 214 (260)
T cd05073 153 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR 214 (260)
T ss_pred cCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 3211 11234566999999988889999999999999999998 999998766554443
No 321
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.5e-34 Score=305.37 Aligned_cols=206 Identities=23% Similarity=0.329 Sum_probs=170.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe---EEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS---FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~---~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
++|+..+.||+|+||.||+|++..+++ .||||+++.. ....+.+..|+++++.+ .|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~ 77 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-------SHHNIIRLEGVVTK 77 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-------CCCCeeEEEEEEcc
Confidence 588999999999999999998876554 7999998754 33456678899888888 58999999999999
Q ss_pred cceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+..++||||+.+ +|.+++.... ..+++..+..++.|++.||+|||+.+|+|+||||+||+++ .++.+||+|||+
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~ 153 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGL 153 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCcc
Confidence 9999999999984 7777776543 4689999999999999999999999999999999999994 568899999999
Q ss_pred ccccccccee------eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 263 ACTEDRTVYS------YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 263 A~~~~~~~~~------~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
+......... ...+..|+|||++....++.++|||||||++|||++ |..||...+..+....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i 223 (268)
T cd05063 154 SRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI 223 (268)
T ss_pred ceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence 8644321111 112346999999998889999999999999999997 99999776655544443
No 322
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-35 Score=335.32 Aligned_cols=251 Identities=25% Similarity=0.391 Sum_probs=207.1
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEe-----CChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik-----~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.+...+||+|+|-+||+|.|..+|..||--.++ +.....+++..|+.+|+.| .|+|||++|+++.+..
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-------~H~NIirfy~SW~d~~ 114 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-------KHPNIIRFYDSWVDTD 114 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-------CCCceeeeeeheecCC
Confidence 355678999999999999999999887744433 3455568899999999999 5899999999998765
Q ss_pred e--eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCC--eeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 186 H--LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 186 ~--l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~g--IVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
. +.+|+|++. |+|..++++.. .++...++.|++|||+||.|||++. |||||||.+||||+ ...|.|||+|+
T Consensus 115 n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDL 190 (632)
T KOG0584|consen 115 NKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDL 190 (632)
T ss_pred CceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecch
Confidence 4 889999997 89999998875 6899999999999999999999985 99999999999997 67799999999
Q ss_pred CCcccccccc-eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCChHHH
Q 002401 261 GSACTEDRTV-YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEF-DLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 261 GlA~~~~~~~-~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~-d~l~~I~~~lG~~PP~~~l 338 (927)
|+|....... ...+||+.|||||+.. ..|+..+||||||++|.||+|+..||...... .+++++.. | ..|..+.
T Consensus 191 GLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--G-iKP~sl~ 266 (632)
T KOG0584|consen 191 GLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--G-IKPAALS 266 (632)
T ss_pred hHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--C-CCHHHhh
Confidence 9997665443 3469999999999997 69999999999999999999999999765444 44444433 2 2221110
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
+
T Consensus 267 k------------------------------------------------------------------------------- 267 (632)
T KOG0584|consen 267 K------------------------------------------------------------------------------- 267 (632)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~ 458 (927)
--++++++||.+||.. .++|+||.|+|+||||.....
T Consensus 268 --V~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 268 --VKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred --cCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence 0125789999999999 999999999999999998744
No 323
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.1e-34 Score=309.33 Aligned_cols=206 Identities=29% Similarity=0.386 Sum_probs=171.0
Q ss_pred CceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d-----~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
++|++.++||+|+||.||+++. ..++..||+|+++.. ......+.+|+++++.+ +|+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~ 77 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-------QHQHIVRFYGVCT 77 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC-------CCCCCceEEEEEe
Confidence 6889999999999999999964 345678999998753 34456788899999988 5899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhcc-------------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEee
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHF-------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT 248 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~-------------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~ 248 (927)
.....++||||+. ++|.+++..... ..+++..++.++.||+.||+|||+++|+|+||||+|||++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~- 156 (280)
T cd05092 78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG- 156 (280)
T ss_pred cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc-
Confidence 9999999999997 688888865421 2488999999999999999999999999999999999994
Q ss_pred cCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002401 249 SVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL 322 (927)
Q Consensus 249 ~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l 322 (927)
+++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |.+||......+.+
T Consensus 157 --~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 234 (280)
T cd05092 157 --QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI 234 (280)
T ss_pred --CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH
Confidence 57889999999986432211 11234577999999999899999999999999999998 99999766655544
Q ss_pred HH
Q 002401 323 RR 324 (927)
Q Consensus 323 ~~ 324 (927)
..
T Consensus 235 ~~ 236 (280)
T cd05092 235 EC 236 (280)
T ss_pred HH
Confidence 33
No 324
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.2e-34 Score=312.80 Aligned_cols=207 Identities=25% Similarity=0.400 Sum_probs=169.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCC--------------eEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCC
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMN--------------SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKH 172 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg--------------~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~Hp 172 (927)
++|++.++||+|+||.||+|++..++ ..||||+++.. ......+.+|+++++.+ .|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-------~h~ 77 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-------KNP 77 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-------CCC
Confidence 69999999999999999999875432 35999998753 33345688899999998 589
Q ss_pred ceeEEEEEEeecceeEEEEeccc-chhHHHHHhhcc----------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCC
Q 002401 173 HIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHF----------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKP 241 (927)
Q Consensus 173 nIVrl~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~----------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKP 241 (927)
||+++++++...+..|+||||+. ++|.+++..... ..+++..+..++.||+.||+|||+++|+|+||||
T Consensus 78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 157 (295)
T cd05097 78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT 157 (295)
T ss_pred CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence 99999999999999999999998 588888754321 1368889999999999999999999999999999
Q ss_pred CCEEEeecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh--CCCCCC
Q 002401 242 ENILLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL--GLPLFP 314 (927)
Q Consensus 242 eNILL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT--G~~PF~ 314 (927)
+|||++ .++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ +..||.
T Consensus 158 ~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 158 RNCLVG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred hhEEEc---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 999995 56789999999986432211 11233567999999998899999999999999999998 678887
Q ss_pred CCCHHHHHHHH
Q 002401 315 GASEFDLLRRM 325 (927)
Q Consensus 315 g~s~~d~l~~I 325 (927)
..+..+.+..+
T Consensus 235 ~~~~~~~~~~~ 245 (295)
T cd05097 235 LLSDEQVIENT 245 (295)
T ss_pred ccChHHHHHHH
Confidence 76665554443
No 325
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.1e-34 Score=310.45 Aligned_cols=201 Identities=26% Similarity=0.409 Sum_probs=166.7
Q ss_pred ceEEEEEeccCCceeEEEeeccC-----CCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAE-----MNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~-----tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
+|++.++||+|+||.||+|++.. ....||+|++.... .....+.+|+.+++.+ .|+||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~ 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-------NHPHVIKLYGACS 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-------CCCCEeeEEEEEe
Confidence 47889999999999999998643 33679999987542 3345788899999988 5899999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhc----------------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINH----------------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDL 239 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~----------------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDL 239 (927)
..+..++||||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||
T Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~di 153 (290)
T cd05045 74 QDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDL 153 (290)
T ss_pred cCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence 9999999999998 68888876431 134789999999999999999999999999999
Q ss_pred CCCCEEEeecCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCC
Q 002401 240 KPENILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLF 313 (927)
Q Consensus 240 KPeNILL~~~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF 313 (927)
||+|||++ +++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 154 kp~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 154 AARNVLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred hhheEEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 99999994 5688999999998643221 112234667999999988899999999999999999998 99999
Q ss_pred CCCCHHH
Q 002401 314 PGASEFD 320 (927)
Q Consensus 314 ~g~s~~d 320 (927)
.+....+
T Consensus 231 ~~~~~~~ 237 (290)
T cd05045 231 PGIAPER 237 (290)
T ss_pred CCCCHHH
Confidence 7765443
No 326
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.4e-34 Score=329.11 Aligned_cols=201 Identities=28% Similarity=0.393 Sum_probs=167.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccC-----CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAE-----MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~-----tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
.++|++.++||+|+||.||+|++.. +...||||+++.. ....+.+.+|+++|+.+. .||||++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~------~HpnIv~l~~~ 109 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG------PHLNIVNLLGA 109 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC------CCCCeeeEEEE
Confidence 3789999999999999999997643 3457999999753 333467889999999984 38999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhc-----------------------------------------------------
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINH----------------------------------------------------- 206 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~----------------------------------------------------- 206 (927)
+...+.+|||||||. |+|.+++....
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 999999999999997 68888776532
Q ss_pred -----------------------------------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEE
Q 002401 207 -----------------------------------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENIL 245 (927)
Q Consensus 207 -----------------------------------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNIL 245 (927)
...+++..++.++.||++||+|||+++|+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 124788889999999999999999999999999999999
Q ss_pred EeecCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002401 246 LCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS 317 (927)
Q Consensus 246 L~~~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s 317 (927)
++ .++.+||+|||++...... .....++..|+|||++.+..++.++|||||||+||||++ |..||....
T Consensus 270 l~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 270 LA---QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred Ee---CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 95 5678999999998653221 112345677999999998899999999999999999997 999997643
No 327
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.9e-34 Score=309.96 Aligned_cols=206 Identities=23% Similarity=0.405 Sum_probs=170.7
Q ss_pred CCceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~-----~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
.++|++++.||+|+||.||+|.+. .++..||||+++.. ......+.+|+.+++++ +|+||++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-------~h~~iv~~~~~ 76 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-------DHPNIVKLLGV 76 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-------CCCchheEEEE
Confidence 368999999999999999999864 36788999998754 23345688899999988 58999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhc--------------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccC
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINH--------------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDL 239 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~--------------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDL 239 (927)
+...+.+|+||||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||
T Consensus 77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl 156 (288)
T cd05050 77 CAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDL 156 (288)
T ss_pred EcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 999999999999998 58988886432 124788899999999999999999999999999
Q ss_pred CCCCEEEeecCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCC
Q 002401 240 KPENILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLF 313 (927)
Q Consensus 240 KPeNILL~~~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF 313 (927)
||+|||++ .++.+||+|||++...... ......+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 157 ~p~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 157 ATRNCLVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred cHhheEec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 99999994 6788999999998643221 112234567999999998899999999999999999997 88898
Q ss_pred CCCCHHHHHH
Q 002401 314 PGASEFDLLR 323 (927)
Q Consensus 314 ~g~s~~d~l~ 323 (927)
.+.+..+.+.
T Consensus 234 ~~~~~~~~~~ 243 (288)
T cd05050 234 YGMAHEEVIY 243 (288)
T ss_pred CCCCHHHHHH
Confidence 7665544433
No 328
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-34 Score=312.16 Aligned_cols=206 Identities=25% Similarity=0.393 Sum_probs=170.4
Q ss_pred CceEEEEEeccCCceeEEEeecc-------CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA-------EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~-------~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
++|++.+.||+|+||.||+|+.. ..+..||||+++.. ......+.+|+.+++.+. .|+||+++++
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~i~~~~~ 88 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG------KHKNIINLLG 88 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc------cCCCchheeE
Confidence 78999999999999999999642 23457999998753 334567888999999884 4899999999
Q ss_pred EEeecceeEEEEeccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 180 YFVCQRHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
++.....+|+||||+. ++|.+++.... ...+++..+..++.||++||+|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999997 58988887642 12478889999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002401 245 LLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE 318 (927)
Q Consensus 245 LL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~ 318 (927)
|++ .++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 169 li~---~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 169 LVT---ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred EEc---CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 994 66889999999997543211 12234567999999998899999999999999999998 8889977665
Q ss_pred HHHHH
Q 002401 319 FDLLR 323 (927)
Q Consensus 319 ~d~l~ 323 (927)
.+...
T Consensus 246 ~~~~~ 250 (304)
T cd05101 246 EELFK 250 (304)
T ss_pred HHHHH
Confidence 44443
No 329
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.9e-34 Score=303.57 Aligned_cols=195 Identities=26% Similarity=0.376 Sum_probs=162.0
Q ss_pred EEeccCCceeEEEeeccCCC---eEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMN---SFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg---~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
++||+|+||.||+|+...++ ..||+|+++.... ..+.+.+|+++++.+ +|+||+++++++. .+.+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~-~~~~~~ 72 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-------DHPCIVRLIGVCK-GEPLML 72 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-------CCCCeeeEEEEEc-CCceEE
Confidence 46999999999999765554 7899999986543 456788899999888 5899999999876 456899
Q ss_pred EEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 190 CFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 190 VmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
||||+. ++|.+++.... .+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||+++....
T Consensus 73 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~~~~ 147 (257)
T cd05060 73 VMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRALGA 147 (257)
T ss_pred EEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccceeec
Confidence 999997 58999887654 689999999999999999999999999999999999994 668899999999975432
Q ss_pred cceee------ccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002401 269 TVYSY------IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL 322 (927)
Q Consensus 269 ~~~~~------~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l 322 (927)
..... .++..|+|||.+.+..++.++|||||||++|||++ |.+||...+..+..
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~ 208 (257)
T cd05060 148 GSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI 208 (257)
T ss_pred CCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 22111 12356999999988899999999999999999998 99999766554433
No 330
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.3e-34 Score=349.92 Aligned_cols=199 Identities=25% Similarity=0.359 Sum_probs=170.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
++|++.++||+|+||.||+|++..+++.||||+++.+ ....+.+.+|+++++.+ .||||+++++++.+.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-------~HPNIVkl~~v~~d~ 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-------IHPGIVPVYSICSDG 74 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-------CCcCcCeEEEEEeeC
Confidence 6899999999999999999999999999999999753 23456788899999988 589999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhc---------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCe
Q 002401 185 RHLCICFELLD-SNLYELIKINH---------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAE 254 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~---------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~ 254 (927)
+..|+||||++ ++|.+++.... ...++...+..++.||++||+|||++||+||||||+|||++ .++.
T Consensus 75 ~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~ 151 (932)
T PRK13184 75 DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGE 151 (932)
T ss_pred CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCC
Confidence 99999999998 58888876421 12356678899999999999999999999999999999994 6688
Q ss_pred EEEeecCCcccccc---------------------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002401 255 IKIIDFGSACTEDR---------------------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313 (927)
Q Consensus 255 IKL~DFGlA~~~~~---------------------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF 313 (927)
+||+|||++..... .....+||+.|+|||++.+..++.++||||||||+|||++|+.||
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 99999999964410 011246899999999999999999999999999999999999999
Q ss_pred CCCC
Q 002401 314 PGAS 317 (927)
Q Consensus 314 ~g~s 317 (927)
....
T Consensus 232 ~~~~ 235 (932)
T PRK13184 232 RRKK 235 (932)
T ss_pred CCcc
Confidence 7643
No 331
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-34 Score=317.04 Aligned_cols=206 Identities=26% Similarity=0.393 Sum_probs=169.8
Q ss_pred CceEEEEEeccCCceeEEEeeccC-------CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-------MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-------tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
.+|++.+.||+|+||.||+|++.. ....||+|+++.. ....+.+.+|+++++++. .|+||+++++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~~ 85 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG------KHKNIINLLG 85 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc------CCCCeeeeeE
Confidence 589999999999999999997543 2346999998753 334567888999999884 3899999999
Q ss_pred EEeecceeEEEEeccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 180 YFVCQRHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
+|...+.+++||||+. ++|.+++.... ...++...+..++.||+.||+|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 9999999999999997 58998887532 12478889999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002401 245 LLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE 318 (927)
Q Consensus 245 LL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~ 318 (927)
|++ .++.+||+|||+++...... ....++..|+|||++.+..++.++|||||||+||||++ |..||.+.+.
T Consensus 166 ll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 166 LVT---EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EEc---CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 994 56889999999986543221 11223457999999999899999999999999999998 8999987665
Q ss_pred HHHHH
Q 002401 319 FDLLR 323 (927)
Q Consensus 319 ~d~l~ 323 (927)
.+...
T Consensus 243 ~~~~~ 247 (334)
T cd05100 243 EELFK 247 (334)
T ss_pred HHHHH
Confidence 55443
No 332
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.3e-34 Score=302.99 Aligned_cols=196 Identities=27% Similarity=0.420 Sum_probs=161.7
Q ss_pred EeccCCceeEEEeec--cCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 116 LLGHGTFGQVAKCWD--AEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d--~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
.||+|+||.||+|.. ..+++.||||+++.. ....+.+.+|+.+++.+ +|+||+++++++. .+..++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~-~~~~~lv 73 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-------DNPYIVRMIGICE-AESWMLV 73 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-------CCCCcceEEEEEc-CCCcEEE
Confidence 589999999999853 567889999998754 23456778899999888 5899999999875 4577999
Q ss_pred Eeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccccc
Q 002401 191 FELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT 269 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~ 269 (927)
|||+. ++|.+++... ..+++..+..++.||+.||+|||+++|+||||||.|||++ .++.+||+|||++......
T Consensus 74 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~~~~~ 148 (257)
T cd05116 74 MELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKALGAD 148 (257)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccccCCC
Confidence 99998 5788888654 3589999999999999999999999999999999999995 5688999999998654322
Q ss_pred ce------eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 270 VY------SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 270 ~~------~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
.. ...++..|+|||.+....++.++|||||||++|||++ |..||......+....
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 210 (257)
T cd05116 149 ENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM 210 (257)
T ss_pred CCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 11 1123468999999988889999999999999999998 9999987665554443
No 333
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.7e-34 Score=304.31 Aligned_cols=206 Identities=22% Similarity=0.365 Sum_probs=170.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe---EEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS---FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~---~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
..|++.+.||+|+||.||+|.+..+++ .||||+++.. ......+..|+.+++.+ .|+||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~ni~~~~~~~~~ 76 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-------DHPNIIHLEGVVTK 76 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-------CCcCcceEEEEECC
Confidence 578999999999999999998876654 6999998753 34456788899999988 58999999999999
Q ss_pred cceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
+..+++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++ .+..+||+|||+
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~~~~kl~dfg~ 152 (269)
T cd05065 77 SRPVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGL 152 (269)
T ss_pred CCceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CCCcEEECCCcc
Confidence 9999999999985 7777776543 4689999999999999999999999999999999999994 667899999999
Q ss_pred cccccccce--e---ec---cCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 263 ACTEDRTVY--S---YI---QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 263 A~~~~~~~~--~---~~---gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
+........ . .. .+..|+|||.+....++.++|||||||++|||++ |..||...+..+....+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i 224 (269)
T cd05065 153 SRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI 224 (269)
T ss_pred ccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence 864322111 1 11 1346999999998899999999999999999886 99999776655444433
No 334
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.5e-34 Score=309.37 Aligned_cols=196 Identities=24% Similarity=0.400 Sum_probs=164.8
Q ss_pred ceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCCh-----hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQP-----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~---~tg~~VAIKiik~~~-----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
+|++.+.||+|+||.||++++. .+++.||||++++.. ...+.+.+|++++..+. +|+||+++++++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~------~~~~i~~~~~~~ 74 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR------RCPFLVTLHYAF 74 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc------CCcchhhhheee
Confidence 4889999999999999999753 467889999997532 23345678999999885 489999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
...+.+||||||+. ++|.+.+... ..+++..++.++.||+++|+|||+.+++|+||||+||+++ .++.++|+||
T Consensus 75 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df 149 (288)
T cd05583 75 QTDTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDF 149 (288)
T ss_pred ecCCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEEC
Confidence 99999999999997 5888877654 3589999999999999999999999999999999999994 5688999999
Q ss_pred CCccccccc----ceeeccCCCCCCcchhcCCC--CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 261 GSACTEDRT----VYSYIQSRYYRSPEVLLGYQ--YTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 261 GlA~~~~~~----~~~~~gT~~Y~APEvl~~~~--ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
|++...... .....++..|+|||.+.+.. .+.++|||||||++|||++|..||...
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 211 (288)
T cd05583 150 GLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVD 211 (288)
T ss_pred ccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccC
Confidence 998643222 12345788999999987764 788999999999999999999999643
No 335
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6e-34 Score=305.11 Aligned_cols=197 Identities=25% Similarity=0.331 Sum_probs=163.5
Q ss_pred EeccCCceeEEEeeccCCCe--EEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 116 LLGHGTFGQVAKCWDAEMNS--FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg~--~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
.||+|+||.||+|++..++. .+|+|.++.. ....+.+.+|++++.++. .|+||+++++++...+.+|+||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~~~~~~~~~~~lv~ 75 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG------HHPNIINLLGACEHRGYLYLAI 75 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc------cCCCeeeEEEEEecCCCceEEE
Confidence 68999999999999887765 4688888742 344567888999999884 4899999999999999999999
Q ss_pred eccc-chhHHHHHhhc--------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEE
Q 002401 192 ELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 192 Ey~~-GsL~dlL~~~~--------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IK 256 (927)
||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---CCCeEE
Confidence 9997 68999887543 12478999999999999999999999999999999999994 678999
Q ss_pred EeecCCccccccccee--eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 257 IIDFGSACTEDRTVYS--YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 257 L~DFGlA~~~~~~~~~--~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
|+|||++......... ...+..|+|||++....++.++|||||||++|||++ |..||.+.+..+.
T Consensus 153 l~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~ 220 (270)
T cd05047 153 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 220 (270)
T ss_pred ECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH
Confidence 9999998543222111 123556999999988899999999999999999997 9999976554443
No 336
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=9.2e-34 Score=308.03 Aligned_cols=204 Identities=26% Similarity=0.406 Sum_probs=167.8
Q ss_pred CceEEEEEeccCCceeEEEeeccC----------------CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCC
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE----------------MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDRED 170 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~----------------tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~ 170 (927)
++|++.++||+|+||.||+|.+.. +...||||+++.. ......+.+|+++|+.+ .
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-------~ 77 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-------K 77 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-------C
Confidence 689999999999999999985432 3457999999853 33456788999999998 4
Q ss_pred CCceeEEEEEEeecceeEEEEeccc-chhHHHHHhhcc---------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCC
Q 002401 171 KHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHF---------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLK 240 (927)
Q Consensus 171 HpnIVrl~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~---------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLK 240 (927)
|+||+++++++...+..|+||||+. ++|.+++..... ..+++..+..++.||+.||+|||+++|+|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 78 DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 8999999999999999999999997 688888865421 237788999999999999999999999999999
Q ss_pred CCCEEEeecCCCCeEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh--CCCCC
Q 002401 241 PENILLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL--GLPLF 313 (927)
Q Consensus 241 PeNILL~~~~~~g~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT--G~~PF 313 (927)
|+|||++ .++.+||+|||++....... .....+..|+|||++....++.++|||||||++|||++ |..||
T Consensus 158 p~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 158 TRNCLVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred hheEEEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 9999994 56889999999986532211 11233567999999988899999999999999999998 77888
Q ss_pred CCCCHHHHH
Q 002401 314 PGASEFDLL 322 (927)
Q Consensus 314 ~g~s~~d~l 322 (927)
...+..+.+
T Consensus 235 ~~~~~~~~~ 243 (296)
T cd05095 235 SQLSDEQVI 243 (296)
T ss_pred cccChHHHH
Confidence 766554433
No 337
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.1e-34 Score=303.25 Aligned_cols=205 Identities=22% Similarity=0.329 Sum_probs=170.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCC---eEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMN---SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg---~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.+|++.+.||+|+||.||+|++..++ ..||+|.++.. ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~ 76 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-------DHPNIIHLEGVVTK 76 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-------CCCCcceEEEEEec
Confidence 68999999999999999999876444 37999998753 33455778899999888 58999999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+.+|+||||++ ++|.+++.... ..+++.++..++.||+.||+|||+++|+||||||+|||++ .++.+||+|||+
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~ 152 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGL 152 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCc
Confidence 999999999997 57888886543 4589999999999999999999999999999999999994 668899999999
Q ss_pred cccccccce---e---eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 263 ACTEDRTVY---S---YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 263 A~~~~~~~~---~---~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
+........ . ...+..|+|||.+.+..++.++|||||||++|||++ |..||......+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~ 221 (267)
T cd05066 153 SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKA 221 (267)
T ss_pred ccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHH
Confidence 865432211 1 112457999999998899999999999999999886 9999977655444433
No 338
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.5e-34 Score=301.02 Aligned_cols=200 Identities=27% Similarity=0.412 Sum_probs=167.3
Q ss_pred EEeccCCceeEEEeeccC-CC--eEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAE-MN--SFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~-tg--~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
++||+|++|.||+|.+.. .+ ..||||+++... ...+.+.+|+.+++++ .|+||+++++++.. ..+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~-~~~~~ 72 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-------DHENLIRLYGVVLT-HPLMM 72 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-------CCCCccceeEEEcC-CeEEE
Confidence 368999999999998755 33 369999998653 3456788899999988 58999999999988 89999
Q ss_pred EEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 190 CFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 190 VmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
||||+. ++|.+.+.......+++..++.++.||++||+|||+++|+|+||||+||+++ .++.+||+|||++.....
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 73 VTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred EEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccc
Confidence 999997 6899988775434689999999999999999999999999999999999995 558999999999865432
Q ss_pred c------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 269 T------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 269 ~------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
. .....++..|+|||.+....++.++|||||||++|||++ |+.||...+..+....+
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 150 NEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI 213 (257)
T ss_pred cccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 1 112345678999999998899999999999999999998 99999776665544443
No 339
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=333.41 Aligned_cols=194 Identities=24% Similarity=0.356 Sum_probs=167.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+...+.+.||+|.||+||++++-. .||||+++.+ ....+.|++|+.+|++-+ |.||+-++++|....
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR-------H~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR-------HENILLFMGACMNPP 461 (678)
T ss_pred HHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcc-------hhhheeeehhhcCCc
Confidence 567788999999999999996544 3999999853 457788999999999985 679999999999877
Q ss_pred eeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
. .||..+|+| +|+.++...+ .+|....++.|++||++|+.|||.++|||||||..|||+ .+++.|||+|||++.
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLAT 536 (678)
T ss_pred e-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEeccccee
Confidence 7 999999997 8888887765 569999999999999999999999999999999999999 466999999999995
Q ss_pred ccc-----ccceeeccCCCCCCcchhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 265 TED-----RTVYSYIQSRYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 265 ~~~-----~~~~~~~gT~~Y~APEvl~~~---~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
... .......+...|||||+++.+ +|++.+||||||||+|||++|..||....
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~ 597 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN 597 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC
Confidence 322 223344667889999999754 79999999999999999999999998433
No 340
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-33 Score=303.81 Aligned_cols=203 Identities=24% Similarity=0.349 Sum_probs=169.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccC----CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAE----MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~----tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
.++|++.++||+|+||.||+|.+.. +++.||+|+++.. ......+.+|+.+++.+ .|+||+++++++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-------~h~ni~~~~~~~ 77 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-------SHQNILPILHVC 77 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEE
Confidence 4799999999999999999998776 3678999998753 34456678899998888 589999999987
Q ss_pred ee-cceeEEEEeccc-chhHHHHHhhcc------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC
Q 002401 182 VC-QRHLCICFELLD-SNLYELIKINHF------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 182 ~~-~~~l~LVmEy~~-GsL~dlL~~~~~------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g 253 (927)
.. ....++++||+. ++|.+++..... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ +++
T Consensus 78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~ 154 (280)
T cd05043 78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EEL 154 (280)
T ss_pred ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCC
Confidence 66 467899999997 688888866432 3589999999999999999999999999999999999994 568
Q ss_pred eEEEeecCCcccccccce-----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 254 EIKIIDFGSACTEDRTVY-----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 254 ~IKL~DFGlA~~~~~~~~-----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
.+||+|||+++....... ...++..|+|||++.+..++.++|||||||++|||++ |+.||...+..+
T Consensus 155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 227 (280)
T cd05043 155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE 227 (280)
T ss_pred cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH
Confidence 999999999964322111 1234667999999998899999999999999999998 999997765544
No 341
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.6e-34 Score=304.76 Aligned_cols=179 Identities=22% Similarity=0.298 Sum_probs=152.1
Q ss_pred CCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEeccc-chh
Q 002401 120 GTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNL 198 (927)
Q Consensus 120 GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~-GsL 198 (927)
|.|+.||+|++..+++.||+|+++.... ..+|...+... .|+||+++++++...+..||||||+. ++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPH-------CVPNMVCLHKYIVSEDSVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhc-------CCCceeehhhheecCCeEEEEEecCCCCCH
Confidence 8999999999999999999999986532 22333333222 48999999999999999999999998 588
Q ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccceeeccCCC
Q 002401 199 YELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRY 278 (927)
Q Consensus 199 ~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~~~~gT~~ 278 (927)
.+++.... .+++..++.++.||++||+|||+++|+||||||+||+++ .++.++|+|||.+............+..
T Consensus 73 ~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~~~~~~~~~~~ 147 (237)
T cd05576 73 WSHISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVEDSCDGEAVENM 147 (237)
T ss_pred HHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhccccccccCCcCcc
Confidence 88886653 589999999999999999999999999999999999994 6688999999988665554445566778
Q ss_pred CCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 279 YRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 279 Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
|+|||.+....++.++||||+||++|||++|+.+|.
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 999999988889999999999999999999998763
No 342
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.9e-34 Score=318.37 Aligned_cols=200 Identities=28% Similarity=0.410 Sum_probs=164.6
Q ss_pred CceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|++.++||+|+||.||+|++ ..+++.||||+++.. ......+.+|+.+|.++. +|+||+++++++
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~niv~~~~~~ 80 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG------HHLNVVNLLGAC 80 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc------CCccHhhhccee
Confidence 6899999999999999999974 356789999999753 234456788999999985 389999999988
Q ss_pred eec-ceeEEEEeccc-chhHHHHHhhc-----------------------------------------------------
Q 002401 182 VCQ-RHLCICFELLD-SNLYELIKINH----------------------------------------------------- 206 (927)
Q Consensus 182 ~~~-~~l~LVmEy~~-GsL~dlL~~~~----------------------------------------------------- 206 (927)
... ..+++||||++ ++|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 81 TKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 654 46899999998 68888876432
Q ss_pred ------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc----
Q 002401 207 ------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---- 270 (927)
Q Consensus 207 ------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~---- 270 (927)
...+++..+..++.||++||+|||+++|+||||||+|||++ .++.+||+|||++.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~ 237 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVR 237 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhh
Confidence 12367888899999999999999999999999999999994 66889999999986532211
Q ss_pred -eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002401 271 -YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS 317 (927)
Q Consensus 271 -~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s 317 (927)
....++..|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 11234567999999998899999999999999999997 999997643
No 343
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.6e-33 Score=296.93 Aligned_cols=195 Identities=28% Similarity=0.434 Sum_probs=162.8
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
++||+|+||.||++... ++..||+|+++.. ......+.+|+++++.+ +|+||+++++++...+..++|||
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~lv~e 72 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQY-------DHPNIVKLIGVCTQRQPIYIVME 72 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-------CCCCcCeEEEEEecCCccEEEEE
Confidence 36999999999999854 6788999998754 23344677899999888 58999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccce
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY 271 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~ 271 (927)
|+. ++|.+++.... ..+++..+..++.||+.+|.|||+++++|+||||+||+++ .++.+||+|||++........
T Consensus 73 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~ 148 (250)
T cd05085 73 LVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIY 148 (250)
T ss_pred CCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccceecccccc
Confidence 997 58888776543 4589999999999999999999999999999999999994 668899999999865433221
Q ss_pred e----eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 272 S----YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 272 ~----~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
. ...+..|+|||++....++.++|||||||++|+|++ |..||......+.
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~ 203 (250)
T cd05085 149 SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA 203 (250)
T ss_pred ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 1 133456999999988889999999999999999998 9999987655443
No 344
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.1e-33 Score=305.20 Aligned_cols=199 Identities=25% Similarity=0.325 Sum_probs=163.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe----EEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS----FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~----~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
++|++.+.||+|+||+||+|++..+++ .|++|++... ......+..|+.+++.+ +|+||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-------~h~~iv~~~~~~~ 79 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-------DHAYIVRLLGICP 79 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC-------CCCCcceEEEEEC
Confidence 689999999999999999999877766 4777777543 22334556666676666 6899999999875
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
....++|+||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||
T Consensus 80 -~~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~---~~~~~kl~Dfg 154 (279)
T cd05111 80 -GASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK---SDSIVQIADFG 154 (279)
T ss_pred -CCccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEcCCc
Confidence 456788999987 79999887643 4689999999999999999999999999999999999994 67889999999
Q ss_pred Cccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHH
Q 002401 262 SACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEF 319 (927)
Q Consensus 262 lA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~ 319 (927)
+++..... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 218 (279)
T cd05111 155 VADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH 218 (279)
T ss_pred cceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99643211 122345678999999998899999999999999999998 99999776543
No 345
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=331.43 Aligned_cols=185 Identities=28% Similarity=0.418 Sum_probs=163.5
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
-++-||.|+-|.||+++ -.++.||||+++.- ...+|+-|++| .|+||+.|.++|.....+|||||
T Consensus 128 ELeWlGSGaQGAVF~Gr--l~netVAVKKV~el------kETdIKHLRkL-------kH~NII~FkGVCtqsPcyCIiME 192 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGR--LHNETVAVKKVREL------KETDIKHLRKL-------KHPNIITFKGVCTQSPCYCIIME 192 (904)
T ss_pred hhhhhccCcccceeeee--ccCceehhHHHhhh------hhhhHHHHHhc-------cCcceeeEeeeecCCceeEEeee
Confidence 34669999999999995 45788999998732 23578888888 58999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc--c
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--T 269 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~--~ 269 (927)
||. |-|+++|+..+ .++...+..|..+|+.|+.|||.++|||||||.-||||+ .+..|||+|||.++...+ .
T Consensus 193 fCa~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~ST 267 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKST 267 (904)
T ss_pred ccccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhh
Confidence 997 89999998875 699999999999999999999999999999999999996 446799999999976543 3
Q ss_pred ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 270 VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 270 ~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
...++||..|||||+|++.+++.|+|||||||||||||||..||...+
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd 315 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD 315 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence 456799999999999999999999999999999999999999996543
No 346
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.5e-33 Score=301.19 Aligned_cols=205 Identities=27% Similarity=0.427 Sum_probs=168.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCC---CeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~t---g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.++|.+.++||+|+||.||+|.+... ...||||++... ....+.+.+|+.+++.+ +|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-------~h~~i~~~~~~~~ 77 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-------DHPHIVKLIGVIT 77 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-------CCCchhceeEEEc
Confidence 36899999999999999999986544 456999998754 34456788899999988 5899999999887
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
. ...|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++++|+||||+|||++ ..+.+||+|||
T Consensus 78 ~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g 152 (270)
T cd05056 78 E-NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFG 152 (270)
T ss_pred C-CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCc
Confidence 5 56789999997 68998887643 3589999999999999999999999999999999999995 56789999999
Q ss_pred Ccccccccce----eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 002401 262 SACTEDRTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR 324 (927)
Q Consensus 262 lA~~~~~~~~----~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~ 324 (927)
++........ ....+..|+|||.+....++.++|||||||++|||++ |..||...+..+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~ 220 (270)
T cd05056 153 LSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR 220 (270)
T ss_pred eeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 9865432211 1123457999999988889999999999999999996 9999987765554433
No 347
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.7e-33 Score=296.79 Aligned_cols=194 Identities=28% Similarity=0.433 Sum_probs=163.6
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
++||+|+||.||+|.+.. ++.||+|+++... .....+.+|+++++.+ +|+||+++++++......++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~i~~~~~~~~~~~~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-------DHPNIVKLIGVCVQKQPIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-------CCCCeEEEEEEEecCCCeEEEEE
Confidence 369999999999999877 8999999987643 2456778899999888 58999999999999999999999
Q ss_pred ccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccce
Q 002401 193 LLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY 271 (927)
Q Consensus 193 y~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~ 271 (927)
|+. ++|.+++.... ..+++..+..++.|++.+|+|||+++|+||||||+|||++ .++.+||+|||++........
T Consensus 73 ~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~~ 148 (251)
T cd05041 73 LVPGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSREEEGGIY 148 (251)
T ss_pred cCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeeccccccccCCcc
Confidence 997 57888876543 3589999999999999999999999999999999999994 668899999999875432211
Q ss_pred e-----eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 272 S-----YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 272 ~-----~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
. ...+..|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 149 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~ 203 (251)
T cd05041 149 TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ 203 (251)
T ss_pred eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH
Confidence 1 122456999999988899999999999999999999 899997665433
No 348
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-33 Score=301.39 Aligned_cols=194 Identities=22% Similarity=0.224 Sum_probs=153.1
Q ss_pred EEeccCCceeEEEeeccC------------CCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 115 DLLGHGTFGQVAKCWDAE------------MNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~------------tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
+.||+|+||.||+++... ....||+|++.... .....+.+|+.+++.+ .||||+++++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-------~hp~iv~~~~~~ 73 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV-------SHKHIVLLYGVC 73 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC-------CCCCEeeEEEEE
Confidence 368999999999997432 23358999887543 2334566778888877 589999999999
Q ss_pred eecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC----CCCeEE
Q 002401 182 VCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV----KPAEIK 256 (927)
Q Consensus 182 ~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~----~~g~IK 256 (927)
..+...++||||+++ .|..++.. ....+++..++.++.||++||+|||+++|+||||||+|||++.+. ....+|
T Consensus 74 ~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 74 VRDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred ecCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeE
Confidence 999999999999985 45444443 334689999999999999999999999999999999999996321 112489
Q ss_pred EeecCCcccccccceeeccCCCCCCcchhc-CCCCCchhHHHHHHHHHHHHH-hCCCCCCCCC
Q 002401 257 IIDFGSACTEDRTVYSYIQSRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELF-LGLPLFPGAS 317 (927)
Q Consensus 257 L~DFGlA~~~~~~~~~~~gT~~Y~APEvl~-~~~ys~ksDIWSLG~ILyELl-TG~~PF~g~s 317 (927)
|+|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..||....
T Consensus 153 l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 214 (262)
T cd05077 153 LSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT 214 (262)
T ss_pred eCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 9999998654322 2346788899999987 457899999999999999998 5888886543
No 349
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-36 Score=359.52 Aligned_cols=254 Identities=30% Similarity=0.487 Sum_probs=207.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
-++.-..+||.|.||.||.|.+..+|+..|+|-++-.. .....+.+|.++|..| .|||||++|++-.+.+
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-------nHpNlV~YyGVEvHRe 1307 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-------NHPNLVRYYGVEVHRE 1307 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc-------cCccccccCceeecHH
Confidence 46777789999999999999999999999999997543 3445677899999999 5899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
..+|.||||+ |+|.+++.... ..+|...+.+..|++.||+|||++|||||||||+||||+ ..+.||+.|||.|.
T Consensus 1308 kv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld---~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD---FNGLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee---cCCcEEeeccccee
Confidence 9999999998 57887776553 478888899999999999999999999999999999994 67899999999997
Q ss_pred ccccc-------ceeeccCCCCCCcchhcCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCC
Q 002401 265 TEDRT-------VYSYIQSRYYRSPEVLLGYQ---YTTAIDMWSFGCIVAELFLGLPLFPGASE-FDLLRRMIRILGAQP 333 (927)
Q Consensus 265 ~~~~~-------~~~~~gT~~Y~APEvl~~~~---ys~ksDIWSLG~ILyELlTG~~PF~g~s~-~d~l~~I~~~lG~~P 333 (927)
..... ...+.||+.|||||++.+.. ...++||||||||+.||+||+.||...+. ..++.++- .|..|
T Consensus 1383 ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~--~gh~P 1460 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA--AGHKP 1460 (1509)
T ss_pred EecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh--ccCCC
Confidence 54332 34568999999999998753 55799999999999999999999965433 22222221 11011
Q ss_pred ChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCCh
Q 002401 334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSM 413 (927)
Q Consensus 334 P~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~ 413 (927)
.+|
T Consensus 1461 ----------------------------------------------------------------------q~P------- 1463 (1509)
T KOG4645|consen 1461 ----------------------------------------------------------------------QIP------- 1463 (1509)
T ss_pred ----------------------------------------------------------------------CCc-------
Confidence 011
Q ss_pred hhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCCCC
Q 002401 414 EDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (927)
Q Consensus 414 e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~~~ 459 (927)
..++.+..|||.+||+.||++||++.|+|+|-|-+...-+
T Consensus 1464 ------~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1464 ------ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred ------hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence 1145678999999999999999999999999998765433
No 350
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-33 Score=304.76 Aligned_cols=194 Identities=28% Similarity=0.375 Sum_probs=162.2
Q ss_pred Cce-EEEEEeccCCceeEEEee----ccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRY-IVKDLLGHGTFGQVAKCW----DAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY-~i~~~LG~GsfG~Vyka~----d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++| ++++.||+|+||+||++. ...+++.||+|+++... .....+.+|+++|+.+ +|+||+++++++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~ 75 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-------YHENIVKYKGCC 75 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-------CCCCEeeEEEEE
Confidence 455 999999999999998764 44578899999998542 3456678899999988 589999999988
Q ss_pred eec--ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 182 VCQ--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 182 ~~~--~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
... ..+++||||+. ++|.+++... .+++..++.++.||+.||+|||+++|+|+||||+|||++ .++.+||+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~ 149 (283)
T cd05080 76 SEQGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIG 149 (283)
T ss_pred ecCCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEe
Confidence 754 46899999998 5788877654 499999999999999999999999999999999999994 56889999
Q ss_pred ecCCcccccccc------eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 259 DFGSACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 259 DFGlA~~~~~~~------~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
|||++....... ....++..|+|||.+.+..++.++|||||||++|||++|..||..
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 150 DFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred ecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 999986543221 112345679999999888899999999999999999999999854
No 351
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.5e-33 Score=301.79 Aligned_cols=195 Identities=27% Similarity=0.405 Sum_probs=163.1
Q ss_pred CceEEEEEeccCCceeEEEee----ccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCW----DAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~----d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.+|++++.||+|+||.||++. +..+++.||||+++.. ....+.+.+|+++++.+ .|+||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~ 76 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-------QHDNIVKYKGVCYS 76 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-------CCCCeeEEEEEEcc
Confidence 589999999999999999987 4567889999998754 33456778899999988 58999999998754
Q ss_pred c--ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeec
Q 002401 184 Q--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF 260 (927)
Q Consensus 184 ~--~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DF 260 (927)
. ..+++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+||
T Consensus 77 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~---~~~~~~l~df 152 (284)
T cd05081 77 AGRRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE---SENRVKIGDF 152 (284)
T ss_pred CCCCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC---CCCeEEECCC
Confidence 3 46899999997 68988886543 3589999999999999999999999999999999999994 6688999999
Q ss_pred CCcccccccce------eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 261 GSACTEDRTVY------SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 261 GlA~~~~~~~~------~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
|++........ ....+..|+|||++.+..++.++|||||||++|||+++..++.
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 153 GLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred cccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 99975432211 1122345999999998899999999999999999999877664
No 352
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=8.9e-34 Score=302.03 Aligned_cols=201 Identities=24% Similarity=0.383 Sum_probs=164.3
Q ss_pred EeccCCceeEEEeeccCCC------eEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 116 LLGHGTFGQVAKCWDAEMN------SFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg------~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
.||+|+||.||++++.... +.||||.+.... .....+.+|+.+++.+ +|+||+++++++...+..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~ 74 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-------NHPNIVKLLGVCLLNEPQ 74 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-------CCCCeeeEeeeecCCCCe
Confidence 6999999999999876544 789999987543 3456788899999988 589999999999999999
Q ss_pred EEEEeccc-chhHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC--CCCeEEEee
Q 002401 188 CICFELLD-SNLYELIKINHF-----RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV--KPAEIKIID 259 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~-----~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~--~~g~IKL~D 259 (927)
++||||+. ++|.+++..... ..+++..+..++.||+.||+|||+++|+|+||||+||+++.+. ....+||+|
T Consensus 75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999997 689888865421 2378899999999999999999999999999999999996432 223899999
Q ss_pred cCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 260 FGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 260 FGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
||++...... ......+..|+|||++.+..++.++|||||||++|||++ |..||...+..+...
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~ 224 (269)
T cd05044 155 FGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQ 224 (269)
T ss_pred cccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHH
Confidence 9998643221 112234678999999998899999999999999999998 999998766544433
No 353
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=8.2e-34 Score=337.55 Aligned_cols=274 Identities=21% Similarity=0.260 Sum_probs=180.8
Q ss_pred cCCceEEEEEeccCCceeEEEeeccCC----CeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE--
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDAEM----NSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY-- 180 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~~t----g~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~-- 180 (927)
..++|++.++||+|+||.||+|++..+ +..||||+++.... .|+.+..++.+. .+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~----~~~~~~~~~~~~~ 199 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRA----CPNSCADFVYGFL 199 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhh----chhhHHHHHHhhh
Confidence 357999999999999999999999988 89999999874322 122222222221 11122221111
Q ss_pred ----EeecceeEEEEeccc-chhHHHHHhhccC------------------CCCHHHHHHHHHHHHHHHhhhccCCeeec
Q 002401 181 ----FVCQRHLCICFELLD-SNLYELIKINHFR------------------GLSLSIVQLFSKQILRGLSLLKDAGIIHC 237 (927)
Q Consensus 181 ----f~~~~~l~LVmEy~~-GsL~dlL~~~~~~------------------~L~e~~i~~i~~QIl~aL~yLHs~gIVHr 237 (927)
......++|||||+. ++|.+++...... ...+..++.++.||+.||+|||+++||||
T Consensus 200 ~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHR 279 (566)
T PLN03225 200 EPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHR 279 (566)
T ss_pred cccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 235568999999998 5788887654210 12244577899999999999999999999
Q ss_pred cCCCCCEEEeecCCCCeEEEeecCCcccccc----cceeeccCCCCCCcchhcCC----------------------CCC
Q 002401 238 DLKPENILLCTSVKPAEIKIIDFGSACTEDR----TVYSYIQSRYYRSPEVLLGY----------------------QYT 291 (927)
Q Consensus 238 DLKPeNILL~~~~~~g~IKL~DFGlA~~~~~----~~~~~~gT~~Y~APEvl~~~----------------------~ys 291 (927)
||||+|||++ ...+.+||+|||+|+.... .....++++.|+|||.+... .++
T Consensus 280 DLKP~NILl~--~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 280 DVKPQNIIFS--EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred cCCHHHEEEe--CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 9999999995 3457899999999964322 23456789999999976432 244
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchh
Q 002401 292 TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQ 371 (927)
Q Consensus 292 ~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~ 371 (927)
.++||||||||||||+++..++ .+....+.+++...+.....+ .. ...
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~-~~----------~~~------------------- 405 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAW-RK----------LVE------------------- 405 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHH-HH----------hhc-------------------
Confidence 5679999999999999865443 344444444444333110000 00 000
Q ss_pred hhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCC
Q 002401 372 ALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHP 451 (927)
Q Consensus 372 ~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHP 451 (927)
+ . ....+.+.+ .........++|||++||++||++|||++|||+||
T Consensus 406 --------------~----~--~~~~~~~~~--------------~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hp 451 (566)
T PLN03225 406 --------------P----R--ASPDLRRGF--------------EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHP 451 (566)
T ss_pred --------------c----c--cchhhhhhh--------------hhccccchHHHHHHHHHccCCcccCCCHHHHhCCc
Confidence 0 0 000000000 00011223577999999999999999999999999
Q ss_pred CcCCCCC
Q 002401 452 FVTGEPF 458 (927)
Q Consensus 452 wf~~~~~ 458 (927)
||++...
T Consensus 452 ff~~~~~ 458 (566)
T PLN03225 452 YFDREGL 458 (566)
T ss_pred CcCCCCc
Confidence 9988643
No 354
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.3e-33 Score=302.13 Aligned_cols=202 Identities=22% Similarity=0.321 Sum_probs=169.4
Q ss_pred CceEEEEEeccCCceeEEEeeccC-----CCeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-----MNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-----tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|++++.||+|+||.||+|+.+. +.+.||+|++..... ....+.+|+++++++ +|+||+++++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~ 77 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-------SHKNVVRLLGLC 77 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-------CCcceeeeEEEE
Confidence 689999999999999999998653 356799999875432 456788999999998 489999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhccC-------CCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINHFR-------GLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~~~-------~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g 253 (927)
......|+||||+. ++|.+++...... .+++..++.++.||+.||+|||+++|+||||||+|||++ .++
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~ 154 (275)
T cd05046 78 REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQR 154 (275)
T ss_pred CCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCC
Confidence 99999999999998 6898888765411 589999999999999999999999999999999999995 568
Q ss_pred eEEEeecCCccccccc----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 254 EIKIIDFGSACTEDRT----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 254 ~IKL~DFGlA~~~~~~----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
.+||+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||......+
T Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~ 226 (275)
T cd05046 155 EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE 226 (275)
T ss_pred cEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH
Confidence 8999999998543211 122345667999999988888999999999999999998 888997655443
No 355
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.7e-33 Score=301.05 Aligned_cols=203 Identities=24% Similarity=0.384 Sum_probs=169.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe----EEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS----FVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~----~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.+|++.+.||+|+||.||+|.++.+++ .||+|+++... .....+.+|+.+++.+ .|+||+++++++.
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~ 79 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-------DHPHVVRLLGICL 79 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-------CCCCcceEEEEEe
Confidence 689999999999999999998776654 58999887543 3456778899999988 5899999999988
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
. ...++||||+. ++|.+++.... ..+++..+..++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg 154 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFG 154 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCc
Confidence 7 78999999997 68888887653 3589999999999999999999999999999999999994 66789999999
Q ss_pred Ccccccccce--e---eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 262 SACTEDRTVY--S---YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 262 lA~~~~~~~~--~---~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
++........ . ...+..|+|||.+....++.++|||||||++|||++ |+.||.+....+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 222 (279)
T cd05057 155 LAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD 222 (279)
T ss_pred ccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 9965432211 1 112457999999988899999999999999999998 999998766554433
No 356
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.8e-33 Score=300.42 Aligned_cols=201 Identities=22% Similarity=0.281 Sum_probs=160.0
Q ss_pred EeccCCceeEEEeecc--CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 116 LLGHGTFGQVAKCWDA--EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~--~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
.||+|+||.||+|... .....+|+|.+... ......+.+|+.+++.+ +|+||+++++.+.....+||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-------~h~nii~~~~~~~~~~~~~lv~ 74 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-------NHPNVLQCLGQCIESIPYLLVL 74 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-------CCCCcceEEEEECCCCceEEEE
Confidence 5999999999999543 34567888887643 23345677899988877 5899999999999999999999
Q ss_pred eccc-chhHHHHHhhcc---CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 192 ELLD-SNLYELIKINHF---RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 192 Ey~~-GsL~dlL~~~~~---~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
||+. ++|.+++..... ...++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++....
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGDYGLALEQY 151 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEeccccccccc
Confidence 9998 589888876532 2356788899999999999999999999999999999994 67889999999986432
Q ss_pred cc-----ceeeccCCCCCCcchhcC-------CCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 002401 268 RT-----VYSYIQSRYYRSPEVLLG-------YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 268 ~~-----~~~~~gT~~Y~APEvl~~-------~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~ 326 (927)
.. .....++..|+|||++.. ..++.++|||||||++|||++ |..||....+.+.+..+.
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 223 (269)
T cd05042 152 PEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV 223 (269)
T ss_pred cchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh
Confidence 11 112234667999999753 357889999999999999999 788998776655544443
No 357
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.9e-33 Score=303.21 Aligned_cols=194 Identities=20% Similarity=0.226 Sum_probs=153.6
Q ss_pred EeccCCceeEEEeeccC------------------------CCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCC
Q 002401 116 LLGHGTFGQVAKCWDAE------------------------MNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDRED 170 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~------------------------tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~ 170 (927)
+||+|+||.||++.... ....||+|++.... .....+.+|+.+++.+ .
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-------~ 74 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-------S 74 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC-------C
Confidence 59999999999986321 12358999987543 2334566777777776 5
Q ss_pred CCceeEEEEEEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec
Q 002401 171 KHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS 249 (927)
Q Consensus 171 HpnIVrl~~~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~ 249 (927)
|+||+++++++......+|||||+++ +|..++... ...+++..+..++.||++||+|||+++|+||||||+|||++..
T Consensus 75 h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 75 HIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARL 153 (274)
T ss_pred CCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEecc
Confidence 89999999999999999999999985 565565443 3568999999999999999999999999999999999999632
Q ss_pred ----CCCCeEEEeecCCcccccccceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHH-hCCCCCCCCCH
Q 002401 250 ----VKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELF-LGLPLFPGASE 318 (927)
Q Consensus 250 ----~~~g~IKL~DFGlA~~~~~~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELl-TG~~PF~g~s~ 318 (927)
.....+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||.....
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred CcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 12345899999988543222 23356788999999876 46899999999999999995 68999976543
No 358
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.7e-34 Score=322.39 Aligned_cols=201 Identities=24% Similarity=0.452 Sum_probs=170.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhH----HHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY----QQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~----~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
+.-|..++.||-|+||+|.+++...|...||+|.+++.+... ..+..|-.||.+. +.+-||+||-.|++
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-------Dn~WVVrLyySFQD 700 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-------DNEWVVRLYYSFQD 700 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-------CCcceEEEEEEecc
Confidence 357889999999999999999999999999999998754332 2345566677666 56789999999999
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
++.+|+||||+. |++..+|.+. +-|+|..++.++.+|..|+++.|+.|+|||||||+|||| +.+|.|||+|||+
T Consensus 701 kdnLYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 701 KDNLYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGL 775 (1034)
T ss_pred CCceEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccc
Confidence 999999999998 5777777654 469999999999999999999999999999999999999 5889999999999
Q ss_pred ccc-----------ccc----------------------------------cceeeccCCCCCCcchhcCCCCCchhHHH
Q 002401 263 ACT-----------EDR----------------------------------TVYSYIQSRYYRSPEVLLGYQYTTAIDMW 297 (927)
Q Consensus 263 A~~-----------~~~----------------------------------~~~~~~gT~~Y~APEvl~~~~ys~ksDIW 297 (927)
|.- .+. .....+||+.|+|||+|....|+.-+|.|
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww 855 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW 855 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence 820 000 01235789999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCHHH
Q 002401 298 SFGCIVAELFLGLPLFPGASEFD 320 (927)
Q Consensus 298 SLG~ILyELlTG~~PF~g~s~~d 320 (927)
|.|||||||+.|++||...+..+
T Consensus 856 s~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HhhHHHHHHhhCCCCccCCCCCc
Confidence 99999999999999997665433
No 359
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.3e-33 Score=303.77 Aligned_cols=201 Identities=22% Similarity=0.232 Sum_probs=156.8
Q ss_pred CCceEEEEEeccCCceeEEEeeccCC---CeEEEEEEEeCChhhH--H----H---HHHHHHHHHHHhhhcCCCCCCcee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQPAYY--Q----Q---ALVEVSILTTLNKKYDREDKHHIV 175 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~t---g~~VAIKiik~~~~~~--~----~---~~~Ei~iL~~L~~~~~~~~HpnIV 175 (927)
.++|++.++||+|+||.||+|++..+ ++.+|+|+........ + . ...++..+..+ ...+|++|+
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~----~~~~h~~i~ 86 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNI----HNIDHLGIP 86 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHh----ccCCCCCCC
Confidence 47999999999999999999998777 6678888754322111 0 0 01122222222 334799999
Q ss_pred EEEEEEeecc----eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC
Q 002401 176 RIYEYFVCQR----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK 251 (927)
Q Consensus 176 rl~~~f~~~~----~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~ 251 (927)
++++++.... ..++++|++..++.+++... ...++..++.++.||+.||+|||+++|+||||||+|||++ .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~ 161 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---G 161 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehhccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---C
Confidence 9999766543 45788998887777776553 2467889999999999999999999999999999999994 5
Q ss_pred CCeEEEeecCCccccc----------ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 252 PAEIKIIDFGSACTED----------RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 252 ~g~IKL~DFGlA~~~~----------~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
.+.+||+|||+|+... .......+|+.|+|||++.+..++.++|||||||+||||++|..||.+..
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 6789999999986432 11123468999999999999999999999999999999999999998763
No 360
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.1e-33 Score=321.45 Aligned_cols=203 Identities=28% Similarity=0.411 Sum_probs=168.3
Q ss_pred CceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
++|.+.++||+|+||.||+|++ ..+++.||||+++.. ....+.+++|+++|..+. .|+||+++++++
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~------~H~niv~~~~~~ 110 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG------PHLNIVNLLGAC 110 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC------CCCCeEEEEEEE
Confidence 6788999999999999999984 345678999999854 233456788999999883 289999999999
Q ss_pred eecceeEEEEeccc-chhHHHHHhhcc-----------------------------------------------------
Q 002401 182 VCQRHLCICFELLD-SNLYELIKINHF----------------------------------------------------- 207 (927)
Q Consensus 182 ~~~~~l~LVmEy~~-GsL~dlL~~~~~----------------------------------------------------- 207 (927)
...+.++|||||+. |+|.+++.....
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999998 689998865321
Q ss_pred -------------------------------------------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 208 -------------------------------------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 208 -------------------------------------------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
..+++..++.++.||+.||+|||+.+|+||||||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 2367778899999999999999999999999999999
Q ss_pred EEeecCCCCeEEEeecCCccccccc-----ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002401 245 LLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE 318 (927)
Q Consensus 245 LL~~~~~~g~IKL~DFGlA~~~~~~-----~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~ 318 (927)
|++ ..+.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 271 Ll~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 271 LIC---EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred EEe---CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 995 5688999999998643211 112345778999999998889999999999999999998 8899976544
Q ss_pred HH
Q 002401 319 FD 320 (927)
Q Consensus 319 ~d 320 (927)
.+
T Consensus 348 ~~ 349 (401)
T cd05107 348 NE 349 (401)
T ss_pred hH
Confidence 33
No 361
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2e-33 Score=296.83 Aligned_cols=192 Identities=22% Similarity=0.265 Sum_probs=159.0
Q ss_pred EEeccCCceeEEEeeccCCC----------eEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 115 DLLGHGTFGQVAKCWDAEMN----------SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg----------~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
+.||+|+||.||++.+..++ ..|++|+++........+.+|+.+|+.+ +|+||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL-------SHKHLVKLYGVCVR- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC-------CCcchhheeeEEec-
Confidence 46999999999999988776 4588898876544467778899998887 58999999999988
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC----CCCeEEEee
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV----KPAEIKIID 259 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~----~~g~IKL~D 259 (927)
...++||||+. ++|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++.+. ....+||+|
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCC
Confidence 78899999998 57777776643 3689999999999999999999999999999999999996332 112799999
Q ss_pred cCCcccccccceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q 002401 260 FGSACTEDRTVYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFL-GLPLFPGA 316 (927)
Q Consensus 260 FGlA~~~~~~~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlT-G~~PF~g~ 316 (927)
||++..... .....++..|+|||++... .++.++|||||||++|||++ |..||...
T Consensus 152 fg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~ 210 (259)
T cd05037 152 PGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL 210 (259)
T ss_pred CCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence 999976443 2234567789999999876 78999999999999999999 57777544
No 362
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.2e-33 Score=298.08 Aligned_cols=195 Identities=24% Similarity=0.342 Sum_probs=159.8
Q ss_pred EeccCCceeEEEeecc--CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 116 LLGHGTFGQVAKCWDA--EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~--~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
.||+|+||.||+|... .++..||||+++... ...+.+.+|+.+++++ +|+||+++++++. ...+++||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~ii~~~~~~~-~~~~~lv~ 73 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-------DNPYIVRMIGVCE-AEALMLVM 73 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-------CCCCeEEEEEEEc-CCCeEEEE
Confidence 3899999999998654 456679999997542 3345688999999998 5899999999886 45789999
Q ss_pred eccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc
Q 002401 192 ELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV 270 (927)
Q Consensus 192 Ey~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~ 270 (927)
||++ ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++.......
T Consensus 74 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~ 149 (257)
T cd05115 74 EMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADD 149 (257)
T ss_pred EeCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCccccccCCc
Confidence 9997 57888776543 4689999999999999999999999999999999999994 66889999999986432211
Q ss_pred e------eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 002401 271 Y------SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL 322 (927)
Q Consensus 271 ~------~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l 322 (927)
. ...++..|+|||++....++.++|||||||++|||++ |..||......+..
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 208 (257)
T cd05115 150 SYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM 208 (257)
T ss_pred cceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH
Confidence 1 1122467999999988889999999999999999996 99999876655443
No 363
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-33 Score=304.95 Aligned_cols=195 Identities=26% Similarity=0.352 Sum_probs=163.6
Q ss_pred CceEEEEEeccCCceeEEEee----ccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCW----DAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~----d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
+-|++++.||+|+||.||+|+ ...+++.||+|.++.. ......+.+|+++++.+ .|+||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~ 76 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-------YHENIVKYKGICT 76 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-------CCCCeeeeeeEEe
Confidence 567899999999999999997 3567889999998743 33446788899999988 5899999999988
Q ss_pred ec--ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 183 CQ--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 183 ~~--~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
.. ..+++||||+. ++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++ .++.+||+|
T Consensus 77 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~d 152 (284)
T cd05079 77 EDGGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGD 152 (284)
T ss_pred cCCCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECC
Confidence 75 57899999997 58888876543 3589999999999999999999999999999999999995 567899999
Q ss_pred cCCcccccccc------eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 260 FGSACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 260 FGlA~~~~~~~------~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
||++....... ....++..|+|||++.+..++.++|||||||++|||++++.++.
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~ 213 (284)
T cd05079 153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES 213 (284)
T ss_pred CccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence 99986543211 12345667999999998889999999999999999999876653
No 364
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1e-33 Score=301.29 Aligned_cols=193 Identities=25% Similarity=0.371 Sum_probs=156.7
Q ss_pred EEeccCCceeEEEeeccCCCe-------EEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 115 DLLGHGTFGQVAKCWDAEMNS-------FVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~-------~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+.||.|+||.||+|.+...++ .||+|++.... ...+.+.+|+.+++.+ +|+||+++++++...+.
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-------~h~~iv~~~~~~~~~~~ 73 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-------SHKHLVLNYGVCVCGDE 73 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-------CCCChhheeeEEEeCCC
Confidence 369999999999998765544 38888886543 3345677788888887 58999999999999999
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC-----CCeEEEeec
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK-----PAEIKIIDF 260 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~-----~g~IKL~DF 260 (927)
.++||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++.+.. ...+||+||
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 999999998 57877776543 35899999999999999999999999999999999999964321 234899999
Q ss_pred CCcccccccceeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHHHhC-CCCCCCC
Q 002401 261 GSACTEDRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLG-LPLFPGA 316 (927)
Q Consensus 261 GlA~~~~~~~~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyELlTG-~~PF~g~ 316 (927)
|++..... .....++..|+|||++.+. .++.++|||||||++|||++| .+||...
T Consensus 153 g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~ 209 (258)
T cd05078 153 GISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL 209 (258)
T ss_pred ccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc
Confidence 99865432 2234678889999999874 589999999999999999998 4666443
No 365
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.9e-33 Score=296.11 Aligned_cols=203 Identities=27% Similarity=0.432 Sum_probs=167.2
Q ss_pred ceEEEEEeccCCceeEEEeeccC-CCeEEEEEEEeCC-----------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEE
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAE-MNSFVAVKIIKNQ-----------PAYYQQALVEVSILTTLNKKYDREDKHHIVRI 177 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~-tg~~VAIKiik~~-----------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl 177 (927)
.|++.+.||+|+||.||++++.. +++.+|+|++... .....++..|+.++.+. .+|+||+++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~------~~h~~i~~~ 74 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ------LRHPNIVRY 74 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc------CCCCCeeeE
Confidence 37888999999999999999887 6889999998632 22334456677766653 258999999
Q ss_pred EEEEeecceeEEEEecccc-hhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCC
Q 002401 178 YEYFVCQRHLCICFELLDS-NLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 178 ~~~f~~~~~l~LVmEy~~G-sL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g 253 (927)
++++...+.+|+||||+.+ +|.+++... ....+++..++.++.||+.+|.|||+ .+|+|+||||+|||++ .++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~ 151 (269)
T cd08528 75 YKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDD 151 (269)
T ss_pred EeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCC
Confidence 9999999999999999984 787776542 23458999999999999999999996 7899999999999994 678
Q ss_pred eEEEeecCCccccccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002401 254 EIKIIDFGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321 (927)
Q Consensus 254 ~IKL~DFGlA~~~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~ 321 (927)
.+||+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||........
T Consensus 152 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~ 221 (269)
T cd08528 152 KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL 221 (269)
T ss_pred cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH
Confidence 8999999999654332 2345678889999999988899999999999999999999999976554433
No 366
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-34 Score=337.90 Aligned_cols=210 Identities=28% Similarity=0.416 Sum_probs=183.1
Q ss_pred CCceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~-----~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
..+.++.+.||+|+||+||+|+.. .....||||.+|... ....+|.+|+++|..| +|+|||+|+++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-------~H~nIVrLlGV 557 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-------QHPNIVRLLGV 557 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-------cCCCeEEEEEE
Confidence 357778899999999999999743 345689999999653 3567899999999999 69999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhcc------------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEe
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINHF------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLC 247 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~~------------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~ 247 (927)
|..++-+|+|||||. |+|.++|+.... ..|+..+.+.|+.||+.|++||-++.+|||||-..|+||
T Consensus 558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV- 636 (774)
T KOG1026|consen 558 CREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV- 636 (774)
T ss_pred EccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee-
Confidence 999999999999998 899999987531 128889999999999999999999999999999999999
Q ss_pred ecCCCCeEEEeecCCcccccccceeecc-----CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 248 TSVKPAEIKIIDFGSACTEDRTVYSYIQ-----SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 248 ~~~~~g~IKL~DFGlA~~~~~~~~~~~g-----T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
.+.-.|||+|||+++..-...+...+ ...||+||.|+..+|+.++||||+||+|||+++ |+.||.+.++.++
T Consensus 637 --ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV 714 (774)
T KOG1026|consen 637 --GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV 714 (774)
T ss_pred --ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence 47789999999999865544333333 567999999999999999999999999999998 9999999999999
Q ss_pred HHHHHH
Q 002401 322 LRRMIR 327 (927)
Q Consensus 322 l~~I~~ 327 (927)
++.|.+
T Consensus 715 Ie~i~~ 720 (774)
T KOG1026|consen 715 IECIRA 720 (774)
T ss_pred HHHHHc
Confidence 888764
No 367
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.5e-33 Score=295.50 Aligned_cols=195 Identities=23% Similarity=0.349 Sum_probs=156.9
Q ss_pred EEeccCCceeEEEeeccC---CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe-ecceeE
Q 002401 115 DLLGHGTFGQVAKCWDAE---MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV-CQRHLC 188 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~---tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~-~~~~l~ 188 (927)
+.||+|+||.||+|++.. ....||||.+... ....+.+.+|+.+++.+ +|+||+++++++. .++..+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~~~~ 73 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-------SHPNVLSLLGICLPSEGSPL 73 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-------CCCCcceEEEEeecCCCCcE
Confidence 368999999999998643 3467999998642 33456777888888877 5899999999775 455689
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+||||+. ++|.+++.... ..+.+..+..++.||++||+|||+.+|+||||||+|||++ .++.+||+|||+++...
T Consensus 74 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 74 VVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIY 149 (262)
T ss_pred EEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCcccccccc
Confidence 9999997 68888886543 3467888899999999999999999999999999999994 56789999999986432
Q ss_pred cc-------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 002401 268 RT-------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD 320 (927)
Q Consensus 268 ~~-------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d 320 (927)
.. .....++..|+|||.+....++.++|||||||++|||++ |.+||...+..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~ 210 (262)
T cd05058 150 DKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD 210 (262)
T ss_pred CCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 21 112234667999999988899999999999999999999 567776655443
No 368
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.1e-33 Score=297.42 Aligned_cols=197 Identities=20% Similarity=0.232 Sum_probs=159.5
Q ss_pred EEeccCCceeEEEeecc--CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDA--EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~--~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
+.||+|+||.||+|... .+...+|+|.++... .....+.+|+.+++.+ +|+||+++++++.+...+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~~~lv 73 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-------QHSNLLQCLGQCTEVTPYLLV 73 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEcCCCCcEEE
Confidence 35899999999999743 456789999987543 2334677899999888 589999999999999999999
Q ss_pred Eeccc-chhHHHHHhhcc---CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 191 FELLD-SNLYELIKINHF---RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 191 mEy~~-GsL~dlL~~~~~---~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
|||+. ++|.+++..... ..+++..++.++.||+.||+|||+++|+|+||||+||+++ ..+.+||+|||++...
T Consensus 74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNK 150 (269)
T ss_pred EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccc
Confidence 99998 688888865431 2466778889999999999999999999999999999994 5688999999998643
Q ss_pred cccc-----eeeccCCCCCCcchhcCC-------CCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 267 DRTV-----YSYIQSRYYRSPEVLLGY-------QYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 267 ~~~~-----~~~~gT~~Y~APEvl~~~-------~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
.... ....++..|+|||++.+. .++.++|||||||++|||++ |..||......+.
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~ 218 (269)
T cd05087 151 YKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV 218 (269)
T ss_pred cCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH
Confidence 3221 123456789999998643 35789999999999999996 9999976655443
No 369
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=331.51 Aligned_cols=257 Identities=26% Similarity=0.458 Sum_probs=217.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec----
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~---- 184 (927)
+.|+|++.||.|.+|.||+++.+.+++.+||||+.-+....+++..|.+||+.+. +|||++.++++|...
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~------~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS------HHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc------CCCCcceEEEEEEEecCCC
Confidence 7899999999999999999999999999999999877666778888999998885 599999999998753
Q ss_pred -ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 185 -RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 185 -~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
+.++||||||. |+.-|+++......+.|+.+..|++.+|.||.+||.+.++|||||-.|||++ ..+.|||+|||.
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFGv 169 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFGV 169 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeeee
Confidence 57999999998 6888888888777899999999999999999999999999999999999996 679999999999
Q ss_pred ccccccc---ceeeccCCCCCCcchhcCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCC
Q 002401 263 ACTEDRT---VYSYIQSRYYRSPEVLLGY-----QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP 334 (927)
Q Consensus 263 A~~~~~~---~~~~~gT~~Y~APEvl~~~-----~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP 334 (927)
+.+.+.. ..+.+||++|||||++... .|+..+|+||||++..||.-|.+|+........+-.|.+ -+||
T Consensus 170 SaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR---NPPP 246 (953)
T KOG0587|consen 170 SAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---NPPP 246 (953)
T ss_pred eeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC---CCCc
Confidence 9776543 4567999999999999754 477899999999999999999999976554333322211 0111
Q ss_pred hHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChh
Q 002401 335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME 414 (927)
Q Consensus 335 ~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e 414 (927)
.
T Consensus 247 k------------------------------------------------------------------------------- 247 (953)
T KOG0587|consen 247 K------------------------------------------------------------------------------- 247 (953)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCCC
Q 002401 415 DISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (927)
Q Consensus 415 ~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~~ 457 (927)
+....+.+.+|.|||..||..|-++||+..++|+|||+++.+
T Consensus 248 -Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 248 -LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred -ccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence 111234456899999999999999999999999999999644
No 370
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-35 Score=324.58 Aligned_cols=256 Identities=24% Similarity=0.426 Sum_probs=218.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.+++++..||-|+||.|-+++.......+|+|++++. ....+.+..|-+||..++ .+.||++|..|.+.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-------s~fIvrLYrTfrd~ 492 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-------SDFIVRLYRTFRDS 492 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-------chHHHHHHHHhccc
Confidence 5777888999999999999977666667999999863 334456778999998884 68999999999999
Q ss_pred ceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+++|++||-|- |.|+.+++.. +.|++..++.++..+++|++|||++|||+|||||+|+++ +..|.+||.|||+|
T Consensus 493 kyvYmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFA 567 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFA 567 (732)
T ss_pred hhhhhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhH
Confidence 99999999885 6899888765 469999999999999999999999999999999999999 57899999999999
Q ss_pred cccc--ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHh
Q 002401 264 CTED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (927)
Q Consensus 264 ~~~~--~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~ 341 (927)
+... ....++|||+.|.|||++++...+.++|.||||+++|||++|.+||.+.+.......|.+.+.. +
T Consensus 568 Kki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~------i--- 638 (732)
T KOG0614|consen 568 KKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK------I--- 638 (732)
T ss_pred HHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh------h---
Confidence 8654 5567789999999999999999999999999999999999999999999888877777663320 0
Q ss_pred hhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhh
Q 002401 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (927)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~ 421 (927)
.+| ..
T Consensus 639 --------------------------------------------------------------~~P-------------r~ 643 (732)
T KOG0614|consen 639 --------------------------------------------------------------EFP-------------RR 643 (732)
T ss_pred --------------------------------------------------------------hcc-------------cc
Confidence 001 12
Q ss_pred hHHHHHHHHHhccccCcCCCCC-----HHHHHhCCCcCCCCCCC
Q 002401 422 IRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPFTC 460 (927)
Q Consensus 422 ~s~~l~DLI~kML~~DP~kRpT-----A~EaLqHPwf~~~~~~~ 460 (927)
+...+.+||+++...+|.+|+- +.+|-+|.||.+..|..
T Consensus 644 I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg 687 (732)
T KOG0614|consen 644 ITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEG 687 (732)
T ss_pred cchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence 3346789999999999999996 89999999999977643
No 371
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=316.97 Aligned_cols=196 Identities=27% Similarity=0.355 Sum_probs=171.0
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhh-HHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc-e
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY-YQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR-H 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~-~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~-~ 186 (927)
+.|.-..+||+|+||.||++..... ..||||.+...... ..++.+|+.+|.++ .|+|||+|++||.+.+ +
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-------~H~Nlv~LlGyC~e~~~~ 146 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRL-------RHPNLVKLLGYCLEGGEH 146 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcC-------CCcCcccEEEEEecCCce
Confidence 6888889999999999999976554 88999988865443 56699999999999 4899999999999998 5
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCC---eeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG---IIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~g---IVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+||+|||. |+|.+.|.......++|....+|+.++++||+|||+.. |||||||+.|||| +.+...||+|||+
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGL 223 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGL 223 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccC
Confidence 999999998 79999887764327899999999999999999999854 9999999999999 5778999999999
Q ss_pred cccccc-cce--ee-ccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 263 ACTEDR-TVY--SY-IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 263 A~~~~~-~~~--~~-~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
|+.... ... .. .||..|+|||.+.....+.|+|||||||+|.||+||+.+...
T Consensus 224 a~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~ 280 (361)
T KOG1187|consen 224 AKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ 280 (361)
T ss_pred cccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence 976543 222 22 799999999999999999999999999999999999987754
No 372
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.4e-33 Score=298.98 Aligned_cols=196 Identities=30% Similarity=0.391 Sum_probs=166.6
Q ss_pred CceEEEEEeccCCceeEEEeecc----CCCeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA----EMNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~----~tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
++|++.+.||+|+||.||+++.. .+++.||||+++.... ..+.+.+|+++++.+ .|+||+++++++.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-------~~~~i~~~~~~~~ 76 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-------DHENIVKYKGVCE 76 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-------CCCChheEEeeee
Confidence 67889999999999999999854 4578999999986544 367788999999988 4899999999988
Q ss_pred e--cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 183 C--QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 183 ~--~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
. ....++||||+. ++|.+++.... ..+++..+..++.||+.||+|||+++|+|+||||+||+++ .++.+||+|
T Consensus 77 ~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~d 152 (284)
T cd05038 77 KPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISD 152 (284)
T ss_pred cCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcc
Confidence 7 568999999997 58888887653 3589999999999999999999999999999999999994 568999999
Q ss_pred cCCcccccccce------eeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 260 FGSACTEDRTVY------SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 260 FGlA~~~~~~~~------~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
||++........ ....+..|+|||.+.+..++.++|||||||++|||++|..||..
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 214 (284)
T cd05038 153 FGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQS 214 (284)
T ss_pred cccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccc
Confidence 999975542211 12334569999999888999999999999999999999988854
No 373
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=315.69 Aligned_cols=259 Identities=28% Similarity=0.456 Sum_probs=206.3
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
.++|-++.+||+|+|+.||+|.|...+++||||+-... ..+.+.+.+|..|.+.| +||.||++|+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-------DHpRIVKlYD 534 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-------DHPRIVKLYD 534 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-------Ccceeeeeee
Confidence 37999999999999999999999999999999997532 34556678899999888 7999999999
Q ss_pred EEee-cceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC--CeeeccCCCCCEEEeecCCCCeEE
Q 002401 180 YFVC-QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA--GIIHCDLKPENILLCTSVKPAEIK 256 (927)
Q Consensus 180 ~f~~-~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~--gIVHrDLKPeNILL~~~~~~g~IK 256 (927)
+|.. .+.+|-|+|||+|+-+|+..... +-+++.+++.|+.||+.||.||.+. -|||-||||.||||......|.||
T Consensus 535 yfslDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 535 YFSLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred eeeeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeE
Confidence 9975 46799999999986666544433 4699999999999999999999976 499999999999998777789999
Q ss_pred EeecCCcccccccc----------eeeccCCCCCCcchhcCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCC-HHHH
Q 002401 257 IIDFGSACTEDRTV----------YSYIQSRYYRSPEVLLGY----QYTTAIDMWSFGCIVAELFLGLPLFPGAS-EFDL 321 (927)
Q Consensus 257 L~DFGlA~~~~~~~----------~~~~gT~~Y~APEvl~~~----~ys~ksDIWSLG~ILyELlTG~~PF~g~s-~~d~ 321 (927)
|+|||+++..+... ....||.||++||.+.-. +.+.|+||||+|||+|..+.|+.||.... ..++
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI 693 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI 693 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH
Confidence 99999997654332 235789999999988643 47889999999999999999999996432 2222
Q ss_pred HHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHH
Q 002401 322 LRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEI 401 (927)
Q Consensus 322 l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~i 401 (927)
++.- . +++ .. +.
T Consensus 694 LqeN-T---------Ilk-------------------At-----------------------------EV---------- 705 (775)
T KOG1151|consen 694 LQEN-T---------ILK-------------------AT-----------------------------EV---------- 705 (775)
T ss_pred Hhhh-c---------hhc-------------------ce-----------------------------ec----------
Confidence 2210 0 000 00 00
Q ss_pred HhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCC
Q 002401 402 VTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (927)
Q Consensus 402 l~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~ 455 (927)
.||..+ .++.++.+||++||.+.-++|+...|+..||||.-
T Consensus 706 --qFP~KP-----------vVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 706 --QFPPKP-----------VVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred --cCCCCC-----------ccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 122212 23457899999999999999999999999999975
No 374
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=8.7e-33 Score=295.05 Aligned_cols=201 Identities=21% Similarity=0.340 Sum_probs=162.6
Q ss_pred eEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 111 YIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~---~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
|++.++||+|+||.||+|.+. .+++.||||+++.+ ....+++.+|+++++.+ +|+||+++++++...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~ 73 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-------DHPNVIKLIGVSLRS 73 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-------CCCCcceEEEEEccC
Confidence 677889999999999999754 45789999999753 33456678899999888 589999999988754
Q ss_pred c------eeEEEEeccc-chhHHHHHhhc----cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC
Q 002401 185 R------HLCICFELLD-SNLYELIKINH----FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 185 ~------~l~LVmEy~~-GsL~dlL~~~~----~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g 253 (927)
. ..++++||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+||+++ .+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~ 150 (273)
T cd05074 74 RAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENM 150 (273)
T ss_pred CCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCC
Confidence 2 3478899987 67777765332 12478999999999999999999999999999999999994 568
Q ss_pred eEEEeecCCcccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 254 EIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 254 ~IKL~DFGlA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
.+||+|||+++...... ....++..|++||.+....++.++|||||||++|||++ |++||.+....+.
T Consensus 151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05074 151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI 224 (273)
T ss_pred CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH
Confidence 89999999987543211 12234567999999998899999999999999999999 8999977655443
No 375
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=9.1e-33 Score=301.89 Aligned_cols=198 Identities=23% Similarity=0.360 Sum_probs=164.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe----EEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS----FVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~----~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
.+|++.+.||+|+||.||++++..+++ .||+|++.... .....+.+|+.+++.+ .|+||+++++++.
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-------~h~niv~~~~~~~ 79 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-------DHPHLVRLLGVCL 79 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-------CCCCcccEEEEEc
Confidence 688999999999999999999877775 47888887542 2334677888888888 5899999999887
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
.. ..++|+||+. |+|.+++.... ..+++..+..++.||+.||+|||+++|+|+||||+|||++ .++.+||+|||
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg 154 (303)
T cd05110 80 SP-TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFG 154 (303)
T ss_pred CC-CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEcccc
Confidence 54 5779999998 68888876543 3589999999999999999999999999999999999994 56789999999
Q ss_pred Ccccccccc-----eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCH
Q 002401 262 SACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE 318 (927)
Q Consensus 262 lA~~~~~~~-----~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~ 318 (927)
++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~ 217 (303)
T cd05110 155 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 217 (303)
T ss_pred ccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 997543211 12234668999999998899999999999999999997 8999976543
No 376
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=320.60 Aligned_cols=208 Identities=27% Similarity=0.419 Sum_probs=177.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCe---E-EEEEEEeC----ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNS---F-VAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~---~-VAIKiik~----~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
++-.+.++||+|+||.||+++.+..+. . ||||..+. ......++++|.++|+.+ +|+|||++|++
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-------~H~NVVr~yGV 229 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-------NHPNVVRFYGV 229 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-------CCCCEEEEEEE
Confidence 344556899999999999998665422 3 89999984 245677899999999998 68999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
...+.-++||||+|. |+|.++|+... ..++..+...++.+.+.||+|||++++|||||-.+|+|++ ....+||+|
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISD 305 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISD 305 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCc
Confidence 999999999999998 59999998875 3699999999999999999999999999999999999995 556689999
Q ss_pred cCCccccccccee---eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Q 002401 260 FGSACTEDRTVYS---YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327 (927)
Q Consensus 260 FGlA~~~~~~~~~---~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~~ 327 (927)
||+++........ ..-...|+|||.+....|+.++|||||||++||+++ |..||.+....++..+|..
T Consensus 306 FGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~ 377 (474)
T KOG0194|consen 306 FGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK 377 (474)
T ss_pred cccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence 9999765421111 123567999999999999999999999999999998 8889999998888777743
No 377
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.5e-32 Score=292.63 Aligned_cols=200 Identities=20% Similarity=0.263 Sum_probs=159.0
Q ss_pred EeccCCceeEEEeeccCC--CeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 116 LLGHGTFGQVAKCWDAEM--NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~t--g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
.||+|+||.||+++.... ...+++|.++.. ....+.+.+|+.+++.+ +||||+++++.|.....+|+||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-------~h~~iv~~~~~~~~~~~~~lv~ 74 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-------QHPNILQCLGQCVEAIPYLLVF 74 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc-------CCcchhheEEEecCCCccEEEE
Confidence 599999999999964333 345677777643 23456788888888877 5899999999999999999999
Q ss_pred eccc-chhHHHHHhhc--cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 192 ELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 192 Ey~~-GsL~dlL~~~~--~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
||+. ++|.+++.... ...+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++.....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDYGIGPSRYK 151 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEecccccccccCc
Confidence 9998 58988887643 23467788899999999999999999999999999999994 668899999999853211
Q ss_pred -----cceeeccCCCCCCcchhcC-------CCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 269 -----TVYSYIQSRYYRSPEVLLG-------YQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 269 -----~~~~~~gT~~Y~APEvl~~-------~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
......++..|+|||++.. ..++.++|||||||++|||++ +..||...++.+.+..+
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~ 221 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHV 221 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 1123467788999999853 246789999999999999997 57788776665555543
No 378
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=2e-33 Score=309.60 Aligned_cols=302 Identities=26% Similarity=0.399 Sum_probs=217.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccC---CCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAE---MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~---tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
.+.|+++++||+|.|++||++.+.. ..++||+|.+.... ....+.+|+++|..+. .+.||+++.+++..+
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~g------G~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLG------GSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhc------cchhhhcchhhhccC
Confidence 4789999999999999999999887 78999999987542 2356789999999996 578999999999999
Q ss_pred ceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 185 RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 185 ~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
+..++||||++. ...+++. .++..+++.+++.++.||+++|.+|||||||||.|+|++ ...++-.|+|||+|
T Consensus 108 d~v~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n--~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN--RRTQRGVLVDFGLA 180 (418)
T ss_pred CeeEEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc--cccCCceEEechhH
Confidence 999999999985 4444443 377899999999999999999999999999999999996 66788899999999
Q ss_pred ccc----------c-------c------------------------------cceeeccCCCCCCcchhcCC-CCCchhH
Q 002401 264 CTE----------D-------R------------------------------TVYSYIQSRYYRSPEVLLGY-QYTTAID 295 (927)
Q Consensus 264 ~~~----------~-------~------------------------------~~~~~~gT~~Y~APEvl~~~-~ys~ksD 295 (927)
... . . ......||++|+|||++... ..++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 400 0 0 00123679999999999876 5789999
Q ss_pred HHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhh
Q 002401 296 MWSFGCIVAELFLGLPLF-PGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALT 374 (927)
Q Consensus 296 IWSLG~ILyELlTG~~PF-~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t 374 (927)
|||.|||+..+++++.|| ...++.+.+.+|..++| +..|.+.+. ...++. +. ....+-...
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG---~~~mrk~A~----l~g~~~-l~----------~ksn~~~~~ 322 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFG---SAEMRKCAA----LPGRIL-LW----------QKSNIPTIP 322 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhC---hHHHHHHhh----cCCcee-ee----------ccccccccH
Confidence 999999999999998887 45677889999999988 333433222 111100 00 000000000
Q ss_pred HHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcC
Q 002401 375 EIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVT 454 (927)
Q Consensus 375 ~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~ 454 (927)
......+.. ..+. +...... +. +........+..+.|||.+||+.||.+|+||+|||+||||+
T Consensus 323 e~~~~f~s~-------------~~~~-~~~~~q~-n~--~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~ 385 (418)
T KOG1167|consen 323 ELRVNFETL-------------HIES-IYKSRQP-NT--EREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD 385 (418)
T ss_pred HHHhchhcc-------------Chhh-ccccccc-ce--eeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence 000000000 0000 0000000 00 00011122345889999999999999999999999999999
Q ss_pred CCCC
Q 002401 455 GEPF 458 (927)
Q Consensus 455 ~~~~ 458 (927)
+...
T Consensus 386 ~~~~ 389 (418)
T KOG1167|consen 386 EADR 389 (418)
T ss_pred chhh
Confidence 6543
No 379
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=333.41 Aligned_cols=210 Identities=25% Similarity=0.398 Sum_probs=180.2
Q ss_pred CCceEEEEEeccCCceeEEEeeccCC-----CeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEM-----NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~t-----g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
....++.+.||+|+||.||.+.-... ...||||.+++. .....+|++|..+|+.+ +|||||+++++
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-------~HpNiv~liGv 763 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-------DHPNIVSLIGV 763 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-------CCcceeeEEEe
Confidence 46788999999999999999975433 234999999864 56678899999999999 69999999999
Q ss_pred EeecceeEEEEeccc-chhHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCe
Q 002401 181 FVCQRHLCICFELLD-SNLYELIKINH-----FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAE 254 (927)
Q Consensus 181 f~~~~~l~LVmEy~~-GsL~dlL~~~~-----~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~ 254 (927)
+.+....+||+|||+ |+|+.+|++.+ ...++..++..|+.||++|+.||+++++|||||...|+||+ ....
T Consensus 764 ~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~ 840 (1025)
T KOG1095|consen 764 CLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRV 840 (1025)
T ss_pred ecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCc
Confidence 999999999999998 69999999873 24589999999999999999999999999999999999995 5589
Q ss_pred EEEeecCCcccccccceeec-----cCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHH
Q 002401 255 IKIIDFGSACTEDRTVYSYI-----QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIR 327 (927)
Q Consensus 255 IKL~DFGlA~~~~~~~~~~~-----gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~~ 327 (927)
+||+|||+|+......+... -...|||||.+....++.|+|||||||+|||+++ |..||+..+..+++..+.+
T Consensus 841 VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ 919 (1025)
T KOG1095|consen 841 VKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE 919 (1025)
T ss_pred EEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh
Confidence 99999999985433322221 2356999999999999999999999999999998 9999999988887765544
No 380
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.3e-33 Score=332.64 Aligned_cols=193 Identities=33% Similarity=0.504 Sum_probs=158.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
.+|+.++.||+|+||.||+|+++-+|+.||||+|... ......+.+|+++|.+| +|||||+++..+.+.
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-------nHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL-------NHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc-------CCcceeeeehhhhccCC
Confidence 5788889999999999999999999999999999866 55567788999999999 588999987533210
Q ss_pred --------------------------------------------------------------------------------
Q 002401 185 -------------------------------------------------------------------------------- 184 (927)
Q Consensus 185 -------------------------------------------------------------------------------- 184 (927)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred -------------------------------------ceeEEEEecccchhHH-HHHhhccCCCCHHHHHHHHHHHHHHH
Q 002401 185 -------------------------------------RHLCICFELLDSNLYE-LIKINHFRGLSLSIVQLFSKQILRGL 226 (927)
Q Consensus 185 -------------------------------------~~l~LVmEy~~GsL~d-lL~~~~~~~L~e~~i~~i~~QIl~aL 226 (927)
-.+||-||||+.+|+. ++..+... -....++++++||++||
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGL 710 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHH
Confidence 1268889999975555 45444321 14788999999999999
Q ss_pred hhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc---------------------ccceeeccCCCCCCcchh
Q 002401 227 SLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED---------------------RTVYSYIQSRYYRSPEVL 285 (927)
Q Consensus 227 ~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~---------------------~~~~~~~gT~~Y~APEvl 285 (927)
+|+|+.|||||||||.||+++ ..+.|||+|||+|+... ...+..+||..|+|||++
T Consensus 711 aYIH~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999999999999999994 77899999999996410 123456899999999999
Q ss_pred cCC---CCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 286 LGY---QYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 286 ~~~---~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
.+. .|+.|+|||||||||+||+. ||..
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T 817 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT 817 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCc
Confidence 765 49999999999999999984 4744
No 381
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=7.7e-33 Score=319.90 Aligned_cols=200 Identities=28% Similarity=0.414 Sum_probs=172.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec--
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-- 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-- 184 (927)
.-|...+.||+|+||.||+++++++|+.||||.+++. ....+...+|+++|++|+ |+|||+++++-+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn-------h~NIVk~f~iee~~~~ 85 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN-------HPNIVKLFDIEETKFL 85 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-------chhhhhhcccCCcccc
Confidence 4566778999999999999999999999999999863 344567889999999994 89999999976544
Q ss_pred ----ceeEEEEeccc-chhHHHHHhhc-cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC-CCCeEEE
Q 002401 185 ----RHLCICFELLD-SNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV-KPAEIKI 257 (927)
Q Consensus 185 ----~~l~LVmEy~~-GsL~dlL~~~~-~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~-~~g~IKL 257 (927)
...+||||||. |+|+.++..-. ..+|++.+++.++.+|..||.|||++|||||||||+||++-... ..-..||
T Consensus 86 ~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 86 GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEee
Confidence 36799999997 68988887643 45799999999999999999999999999999999999996543 3334599
Q ss_pred eecCCccccc--ccceeeccCCCCCCcchhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 258 IDFGSACTED--RTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 258 ~DFGlA~~~~--~~~~~~~gT~~Y~APEvl~~-~~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
+|||.|+..+ ......+||..|.+||++.. ..|+..+|.|||||++|+++||..||.-
T Consensus 166 tDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 166 TDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 9999998654 45667899999999999995 7899999999999999999999999953
No 382
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.5e-32 Score=307.90 Aligned_cols=205 Identities=21% Similarity=0.352 Sum_probs=184.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+.++.++||-|.||.||.+.+++-.-.||||.+|.+....++|+.|..+|+.+ .|||+|+|+++|..+.-+|
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei-------kHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-------KHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh-------cCccHHHHhhhhccCCCeE
Confidence 356677899999999999999999999999999999998999999999999999 4899999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
||.|||. |+|+++|+..+...++.-.+..++.||..|++||..+++|||||...|+||. ++..|||+|||+++...
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeeccchhhhhc
Confidence 9999997 8999999999878889899999999999999999999999999999999994 67889999999998765
Q ss_pred cccee-ecc---CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 002401 268 RTVYS-YIQ---SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR 323 (927)
Q Consensus 268 ~~~~~-~~g---T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~ 323 (927)
...++ ..| ...|.|||-+.-..++.|+|||+|||+||||.| |..||++.+-..++.
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~ 477 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG 477 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH
Confidence 54443 233 456999999999999999999999999999998 999999876544433
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-33 Score=295.52 Aligned_cols=260 Identities=22% Similarity=0.324 Sum_probs=204.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
++.+-+..||.|+||+|++..++.+++..|||.|+... ...++++.|.....+- .++||||++|+.+..++.
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks------~~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS------SNCPNIVKFYGALFSEGD 137 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh------cCCcHHHHHhhhhhcCCc
Confidence 44555668999999999999999999999999998543 3344555666554443 469999999999999999
Q ss_pred eEEEEecccchhHH---HHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 187 LCICFELLDSNLYE---LIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 187 l~LVmEy~~GsL~d---lL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.+|.||+|+-+|.. ++.......++|+.+-.|....+.||.||.+ .+||||||||+|||+ +..|.|||||||.
T Consensus 138 cWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGI 214 (361)
T KOG1006|consen 138 CWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGI 214 (361)
T ss_pred eeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccc
Confidence 99999999965543 3333445579999999999999999999985 589999999999999 5789999999999
Q ss_pred ccccccc--ceeeccCCCCCCcchhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 263 ACTEDRT--VYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 263 A~~~~~~--~~~~~gT~~Y~APEvl~~~--~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
+-..... .+...|.+.|||||.+... .|+.++||||||++|||+.||+.||.+.+. ++.++..+....||.-..
T Consensus 215 cGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 215 CGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLF 292 (361)
T ss_pred hHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecC
Confidence 9654333 2345788999999999754 599999999999999999999999977543 444444443324432110
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
. .+
T Consensus 293 ~-----------------------------------------------------------------------------~~ 295 (361)
T KOG1006|consen 293 D-----------------------------------------------------------------------------KE 295 (361)
T ss_pred c-----------------------------------------------------------------------------cc
Confidence 0 00
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
....+..++.||.-||..|-.+||.-.+++++||++.-
T Consensus 296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred ccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence 11244578999999999999999999999999999864
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=1.9e-31 Score=275.32 Aligned_cols=184 Identities=40% Similarity=0.672 Sum_probs=161.5
Q ss_pred CceeEEEeeccCCCeEEEEEEEeCChhh--HHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecccc-h
Q 002401 121 TFGQVAKCWDAEMNSFVAVKIIKNQPAY--YQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-N 197 (927)
Q Consensus 121 sfG~Vyka~d~~tg~~VAIKiik~~~~~--~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~G-s 197 (927)
+||.||+|++..+++.||+|++...... .+.+.+|+++++++ .|+||+++++++......++|||++++ +
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-------~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-------KHPNIVRLYDVFEDEDKLYLVMEYCDGGD 73 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-------CCCcHHHHHhheeeCCEEEEEEeCCCCCC
Confidence 5899999999989999999999764322 56788899999888 589999999999999999999999986 8
Q ss_pred hHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc--cceeecc
Q 002401 198 LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR--TVYSYIQ 275 (927)
Q Consensus 198 L~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~--~~~~~~g 275 (927)
|.+++.... .+++..++.++.+|+.+|.+||+.+|+|+||+|.||+++ ..+.++|+|||.+..... ......+
T Consensus 74 L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~~ 148 (244)
T smart00220 74 LFDLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGLLTTFVG 148 (244)
T ss_pred HHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccccccccC
Confidence 988887654 389999999999999999999999999999999999995 558999999999976544 3345567
Q ss_pred CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 276 T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
+..|++||.+....++.++|||+||+++|+|++|..||...
T Consensus 149 ~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~ 189 (244)
T smart00220 149 TPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD 189 (244)
T ss_pred CcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 88999999999888999999999999999999999999763
No 385
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-32 Score=289.55 Aligned_cols=196 Identities=22% Similarity=0.417 Sum_probs=173.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
..+|.++++||.|+|++|.+++.++|.+.+|+|++|++ .........|..+..... +||.+|-++.+|+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as------n~pflvglhscfqt 322 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS------NNPFLVGLHSCFQT 322 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc------CCCeEEehhhhhcc
Confidence 47999999999999999999999999999999999853 344555667777777664 58999999999999
Q ss_pred cceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
+..+++|.||+.| +|.-.+.+. ++++++.++.+...|+.||.|||++|||.||||.+|+|+ +..+.|||+|+|+
T Consensus 323 esrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygm 397 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGM 397 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccch
Confidence 9999999999985 554333333 469999999999999999999999999999999999999 5789999999999
Q ss_pred ccc---ccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 263 ACT---EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 263 A~~---~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
++. ......++|||+.|+|||++++..|...+|.|+|||+|+||+.|+.||.
T Consensus 398 cke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred hhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 964 4556678899999999999999999999999999999999999999994
No 386
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.9e-32 Score=308.73 Aligned_cols=207 Identities=26% Similarity=0.423 Sum_probs=177.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCC-C--eEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEM-N--SFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~t-g--~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
++.++.++||+|.||.|+++.+... + -.||||+++.+. .....|++|+.+|.+| +|+|+++||++..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-------~H~hliRLyGvVl~ 182 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-------QHPHLIRLYGVVLD 182 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-------cCcceeEEeeeecc
Confidence 5666778999999999999976543 2 359999998653 3567899999999999 58999999999987
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
..+.+|||++. |+|++.|.......|....+..|+.||+.||.||..+++|||||...||||. ....|||+|||+
T Consensus 183 -qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGL 258 (1039)
T KOG0199|consen 183 -QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGL 258 (1039)
T ss_pred -chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccc
Confidence 67889999998 7999999886556799999999999999999999999999999999999994 568899999999
Q ss_pred cccccccceeec--c----CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 002401 263 ACTEDRTVYSYI--Q----SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 263 A~~~~~~~~~~~--g----T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~ 326 (927)
.+........|+ . ...|+|||.|....++.++|||++||+||||++ |.-||.|....+++++|-
T Consensus 259 mRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD 329 (1039)
T KOG0199|consen 259 MRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID 329 (1039)
T ss_pred eeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc
Confidence 976543332222 2 345999999999999999999999999999998 899999988887777654
No 387
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=7.9e-32 Score=304.99 Aligned_cols=202 Identities=30% Similarity=0.469 Sum_probs=170.7
Q ss_pred EEEEEeccCCceeEEEeeccC--CC--eEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 112 IVKDLLGHGTFGQVAKCWDAE--MN--SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 112 ~i~~~LG~GsfG~Vyka~d~~--tg--~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
++.++||+|.||.||++.... .| -.||||+.|.+ ....+.|+.|..+|+.+ +|||||+++++|.+ .
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-------dHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-------DHPHIIKLIGVCVE-Q 463 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-------CCcchhheeeeeec-c
Confidence 344589999999999996432 23 35999999974 45678899999999999 79999999999975 4
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
-.+||||++. |.|..+++.+. ..++...+..+++||+.||+|||++++|||||...|||+. ....|||+|||+++
T Consensus 464 P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSR 539 (974)
T ss_pred ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhh
Confidence 6899999998 89999998876 5699999999999999999999999999999999999995 66789999999998
Q ss_pred cccccceee----ccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 002401 265 TEDRTVYSY----IQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM 325 (927)
Q Consensus 265 ~~~~~~~~~----~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I 325 (927)
..+...+.. .-...|||||.+.-..++.++|||-|||+|||++. |..||.+-.+.|++..|
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i 605 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI 605 (974)
T ss_pred hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe
Confidence 766544322 22456999999999999999999999999999986 99999887666554433
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=8.4e-31 Score=306.47 Aligned_cols=204 Identities=21% Similarity=0.343 Sum_probs=148.2
Q ss_pred cCCceEEEEEeccCCceeEEEeecc----------------CCCeEEEEEEEeCChh-hHH--------------HHHHH
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDA----------------EMNSFVAVKIIKNQPA-YYQ--------------QALVE 155 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~----------------~tg~~VAIKiik~~~~-~~~--------------~~~~E 155 (927)
..++|++.++||+|+||+||++.+. ..++.||||.++.... ..+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3579999999999999999998642 3456799999875321 111 23346
Q ss_pred HHHHHHHhhhcCCCCCCceeEEEEEEee--------cceeEEEEeccc-chhHHHHHhhc--------------------
Q 002401 156 VSILTTLNKKYDREDKHHIVRIYEYFVC--------QRHLCICFELLD-SNLYELIKINH-------------------- 206 (927)
Q Consensus 156 i~iL~~L~~~~~~~~HpnIVrl~~~f~~--------~~~l~LVmEy~~-GsL~dlL~~~~-------------------- 206 (927)
+.++.++++. ...+.++++++++|.. ++..+|||||+. ++|.+++....
T Consensus 223 ~~~l~~l~~~--~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 223 AYMCAKIKRN--PIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHhhcc--cchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 6666666431 1123455777777653 356899999998 58887775321
Q ss_pred --cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc--e--eeccCCCCC
Q 002401 207 --FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV--Y--SYIQSRYYR 280 (927)
Q Consensus 207 --~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~--~--~~~gT~~Y~ 280 (927)
...+++..++.++.||+.+|.|||+++|+||||||+|||++ .++.+||+|||++....... . ....++.|+
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~ 377 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYS 377 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCccee
Confidence 11246778999999999999999999999999999999994 56789999999996432211 1 123478999
Q ss_pred CcchhcCCC--------------------CC--chhHHHHHHHHHHHHHhCCC-CCCC
Q 002401 281 SPEVLLGYQ--------------------YT--TAIDMWSFGCIVAELFLGLP-LFPG 315 (927)
Q Consensus 281 APEvl~~~~--------------------ys--~ksDIWSLG~ILyELlTG~~-PF~g 315 (927)
|||++.... |. .+.||||+|||||+|+++.. ||..
T Consensus 378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 999986432 12 24799999999999999875 6643
No 389
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=300.98 Aligned_cols=212 Identities=25% Similarity=0.357 Sum_probs=179.0
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
..+..++++||+|.||.|.+|+-. ....||||+++.+ ......+.+||++|.+|+ ||||++|+++|..++
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk-------hPNIveLvGVC~~De 608 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLK-------HPNIVELLGVCVQDD 608 (807)
T ss_pred hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccC-------CCCeeEEEeeeecCC
Confidence 468899999999999999999643 3688999999864 334578999999999993 899999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+|+|+|||+ |+|.+++.......+.-.....|+.||+.||+||.+.++|||||.+.|||+ +.+.++||+|||+++
T Consensus 609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSR 685 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCccccc
Confidence 9999999998 899999998864444556677799999999999999999999999999999 578999999999998
Q ss_pred ccccccee-----eccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHhC
Q 002401 265 TEDRTVYS-----YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL--GLPLFPGASEFDLLRRMIRILG 330 (927)
Q Consensus 265 ~~~~~~~~-----~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT--G~~PF~g~s~~d~l~~I~~~lG 330 (927)
..-...+. .+-...|||+|.+...+++.++|+|+||++|||+++ ...||...++++.++.....+.
T Consensus 686 ~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~ 758 (807)
T KOG1094|consen 686 NLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFR 758 (807)
T ss_pred ccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcC
Confidence 54332222 234678999999999999999999999999999875 7899987777766665554433
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=9.9e-32 Score=314.26 Aligned_cols=192 Identities=28% Similarity=0.359 Sum_probs=158.2
Q ss_pred EEEeccCCcee-EEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 114 KDLLGHGTFGQ-VAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 114 ~~~LG~GsfG~-Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
.+++|.|+-|+ ||++ .-.++.||||.+-. .....+.+||..|+.-. +|+|||++|+.-.++..+||+.|
T Consensus 514 ~eilG~Gs~Gt~Vf~G--~ye~R~VAVKrll~--e~~~~A~rEi~lL~eSD------~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRG--VYEGREVAVKRLLE--EFFDFAQREIQLLQESD------EHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred HHHcccCCCCcEEEEE--eeCCceehHHHHhh--HhHHHHHHHHHHHHhcc------CCCceEEEEeeccCCceEEEEeh
Confidence 35689999885 7888 45677999998863 34556789999998874 69999999999999999999999
Q ss_pred cccchhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC--CCCeEEEeecCCcccccc
Q 002401 193 LLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV--KPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 193 y~~GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~--~~g~IKL~DFGlA~~~~~ 268 (927)
+|..+|.+++... ..........+.++.|+++||++||+.+||||||||.||||+..+ ...+++|+|||+++....
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 9999999999884 211112245688899999999999999999999999999997542 346789999999976543
Q ss_pred c------ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhC-CCCCCC
Q 002401 269 T------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLG-LPLFPG 315 (927)
Q Consensus 269 ~------~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG-~~PF~g 315 (927)
. .....||-.|+|||++....-+.++||||||||+|+.++| ..||..
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 2 3345789999999999998888899999999999999985 999954
No 391
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-31 Score=304.74 Aligned_cols=215 Identities=22% Similarity=0.330 Sum_probs=187.9
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCC---eEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEe
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMN---SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg---~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~ 182 (927)
....+|.++||.|.||.|++++.+..+ ..||||.+|.. +....+|+.|..||-++ +||||++|.++..
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-------dHPNIIrLEGVVT 700 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-------DHPNIIRLEGVVT 700 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-------CCCcEEEEEEEEe
Confidence 357789999999999999999887665 46999999964 45567899999999999 7999999999999
Q ss_pred ecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 183 ~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
..+-+.||.|||+ |.|..+|+.+. +.|+..++.-+++.|+.|++||-+.++|||||...|||| +.+-.+|++|||
T Consensus 701 ks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFG 776 (996)
T KOG0196|consen 701 KSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFG 776 (996)
T ss_pred cCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEecccc
Confidence 9999999999998 78888888876 569999999999999999999999999999999999999 467889999999
Q ss_pred Ccccccccceee---cc---CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCC
Q 002401 262 SACTEDRTVYSY---IQ---SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRILGAQP 333 (927)
Q Consensus 262 lA~~~~~~~~~~---~g---T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~~~lG~~P 333 (927)
+++...+..... .| ...|.|||.|...+++.++||||+|++|||.+. |..||...++.|++..|.+..+.+|
T Consensus 777 LSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPp 855 (996)
T KOG0196|consen 777 LSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPP 855 (996)
T ss_pred ceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCC
Confidence 998664433222 11 357999999999999999999999999999886 9999999999999999988777333
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=2e-29 Score=317.20 Aligned_cols=186 Identities=19% Similarity=0.245 Sum_probs=154.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
..|+..++||+|+||.||+|++..+++.||||+++..... ...|+++++++ +|||||+++++|...+..|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l-------~HpnIv~~~~~~~~~~~~~ 759 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKL-------QHPNIVKLIGLCRSEKGAY 759 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhC-------CCCCcceEEEEEEcCCCCE
Confidence 4566778999999999999999999999999998754321 23467777777 5999999999999999999
Q ss_pred EEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhc---cCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK---DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 189 LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLH---s~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
+||||++ ++|.++++ .+++..+..++.||++||+||| +.+|+||||||+||+++ .....++. |+.+.
T Consensus 760 lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~---~~~~~~~~-~~~~~ 830 (968)
T PLN00113 760 LIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID---GKDEPHLR-LSLPG 830 (968)
T ss_pred EEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC---CCCceEEE-ecccc
Confidence 9999998 68888875 3789999999999999999999 67999999999999995 34445554 55443
Q ss_pred cccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 265 TEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 265 ~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
.... .....++..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 831 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 831 LLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred cccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 2211 122367899999999999899999999999999999999999994
No 393
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-29 Score=280.81 Aligned_cols=191 Identities=26% Similarity=0.313 Sum_probs=160.4
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc---
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR--- 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~--- 185 (927)
...++.++||+|.||.||+|+. +++.||||++.. ...+.+.+|-+|.+.... .|+||++++..-....
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~m-----~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE--QEKQSFQNEKNIYSLPGM-----KHENILQFIGAEKRGTADR 280 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCH--HHHHHHHhHHHHHhccCc-----cchhHHHhhchhccCCccc
Confidence 4556778999999999999954 568999999984 345778889999888755 4999999998766544
Q ss_pred -eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC---------CeeeccCCCCCEEEeecCCCCe
Q 002401 186 -HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA---------GIIHCDLKPENILLCTSVKPAE 254 (927)
Q Consensus 186 -~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~---------gIVHrDLKPeNILL~~~~~~g~ 254 (927)
.++||+||.+ |+|.++|+.+. +++....+|+.-|++||+|||+. .|+|||||..|||| ..+..
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlT 354 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLT 354 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCc
Confidence 8999999997 89999999875 99999999999999999999963 59999999999999 57799
Q ss_pred EEEeecCCccccc-----ccceeeccCCCCCCcchhcCC-CCC-----chhHHHHHHHHHHHHHhCCCCCC
Q 002401 255 IKIIDFGSACTED-----RTVYSYIQSRYYRSPEVLLGY-QYT-----TAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 255 IKL~DFGlA~~~~-----~~~~~~~gT~~Y~APEvl~~~-~ys-----~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
..|+|||+|.... ......+||..|||||++.+. .+. .++||||+|.|||||+++...+.
T Consensus 355 ccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~ 425 (534)
T KOG3653|consen 355 CCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDAD 425 (534)
T ss_pred EEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9999999996432 223346899999999999875 233 47999999999999999876653
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-30 Score=289.77 Aligned_cols=197 Identities=27% Similarity=0.476 Sum_probs=176.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHH---------HHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ---------ALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~---------~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
..|..++.||+|+||.|++|.+++....|+||.|.+++..... +-.||+||..|++. .|+||+++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~----sH~NIlKlLd 636 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH----SHENILKLLD 636 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc----Cccchhhhhh
Confidence 4699999999999999999999999999999999876544333 33499999999765 6999999999
Q ss_pred EEeecceeEEEEeccc-c-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEE
Q 002401 180 YFVCQRHLCICFELLD-S-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~-G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL 257 (927)
+|++++++||+||--+ | +|+++|.... .++|.+++.|++||+.|+++||+.||||||||-+|+.+ +.+|.+||
T Consensus 637 fFEddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~kl 711 (772)
T KOG1152|consen 637 FFEDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKL 711 (772)
T ss_pred eeecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEE
Confidence 9999999999999886 4 8999998764 69999999999999999999999999999999999999 57899999
Q ss_pred eecCCccc-ccccceeeccCCCCCCcchhcCCCCC-chhHHHHHHHHHHHHHhCCCCCC
Q 002401 258 IDFGSACT-EDRTVYSYIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 258 ~DFGlA~~-~~~~~~~~~gT~~Y~APEvl~~~~ys-~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
+|||.|.. .......++||..|.|||++.+.+|- ..-|||+||++||.++....||.
T Consensus 712 idfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 712 IDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999864 45566778999999999999999875 67999999999999999998885
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=8.5e-29 Score=251.35 Aligned_cols=210 Identities=22% Similarity=0.388 Sum_probs=174.1
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
+....+..||+|++|.|-+.++..+|...|+|.++.. ....++.++|+.+..+ ..++|.+|++|+.+..+..
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r------~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMR------TVDCPFTVHFYGALFREGD 119 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhcc------CCCCCeEEEeehhhhcccc
Confidence 4566678899999999999999999999999999853 2333444555555444 3579999999999999999
Q ss_pred eEEEEecccchhHHHHHhh--ccCCCCHHHHHHHHHHHHHHHhhhccC-CeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 187 LCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~--~~~~L~e~~i~~i~~QIl~aL~yLHs~-gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
++|.||.|..+|..+.++. ....++|..+-+|+..++.||.|||++ .|||||+||.|||+ +..|++||||||.+
T Consensus 120 vwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccc
Confidence 9999999998877665543 234699999999999999999999975 89999999999999 57899999999999
Q ss_pred ccccccce--eeccCCCCCCcchhcCC----CCCchhHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHH
Q 002401 264 CTEDRTVY--SYIQSRYYRSPEVLLGY----QYTTAIDMWSFGCIVAELFLGLPLFPG-ASEFDLLRRMIR 327 (927)
Q Consensus 264 ~~~~~~~~--~~~gT~~Y~APEvl~~~----~ys~ksDIWSLG~ILyELlTG~~PF~g-~s~~d~l~~I~~ 327 (927)
-...+... ...|...|+|||.+... .|+.++||||||+++.||.+++.||.. .++++++.++++
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 65443332 24677889999999643 699999999999999999999999965 578888888876
No 396
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=5.9e-28 Score=289.87 Aligned_cols=206 Identities=28% Similarity=0.432 Sum_probs=170.5
Q ss_pred CceEEEEEeccCCceeEEEeecc----C---CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDA----E---MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~----~---tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
++..+.+.||+|.||.|+++.-. . ....||||.++.. ....+.+..|+++|+.+. .|+||+.+++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g------~H~niv~llG 369 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG------KHPNIVNLLG 369 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc------CCcchhhhee
Confidence 34467779999999999998632 1 2457999999854 345678889999999996 4999999999
Q ss_pred EEeecceeEEEEeccc-chhHHHHHhhc------c--------CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 180 YFVCQRHLCICFELLD-SNLYELIKINH------F--------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~-GsL~dlL~~~~------~--------~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
++..++.+++|+||+. |+|.++++..+ . ..++..++..++.||+.|++||+++.+|||||-..||
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV 449 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV 449 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence 9999999999999998 89999998775 0 1288999999999999999999999999999999999
Q ss_pred EEeecCCCCeEEEeecCCcccccccceee-c-----cCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 002401 245 LLCTSVKPAEIKIIDFGSACTEDRTVYSY-I-----QSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS 317 (927)
Q Consensus 245 LL~~~~~~g~IKL~DFGlA~~~~~~~~~~-~-----gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s 317 (927)
|++ .+..+||+|||+|+......... . -...|||||.+....|+.++||||+|++||||++ |..||++..
T Consensus 450 Li~---~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 450 LIT---KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred Eec---CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 995 56889999999998543322221 2 1344999999999999999999999999999998 899998744
Q ss_pred -HHHHHH
Q 002401 318 -EFDLLR 323 (927)
Q Consensus 318 -~~d~l~ 323 (927)
..++++
T Consensus 527 ~~~~l~~ 533 (609)
T KOG0200|consen 527 PTEELLE 533 (609)
T ss_pred cHHHHHH
Confidence 444433
No 397
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-28 Score=268.10 Aligned_cols=192 Identities=25% Similarity=0.354 Sum_probs=160.0
Q ss_pred eeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 102 LVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 102 l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
|......++.++++.||+|.||.||++ ...|+.||||++...+ ...+.+|.+|.+...- .|+||+.+++.-
T Consensus 204 LVQRTiarqI~L~e~IGkGRyGEVwrG--~wrGe~VAVKiF~srd--E~SWfrEtEIYqTvmL-----RHENILgFIaaD 274 (513)
T KOG2052|consen 204 LVQRTIARQIVLQEIIGKGRFGEVWRG--RWRGEDVAVKIFSSRD--ERSWFRETEIYQTVML-----RHENILGFIAAD 274 (513)
T ss_pred HhHHhhhheeEEEEEecCccccceeec--cccCCceEEEEecccc--hhhhhhHHHHHHHHHh-----ccchhhhhhhcc
Confidence 344455689999999999999999999 5668999999998543 3567789999888754 599999999875
Q ss_pred eecc----eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC--------CeeeccCCCCCEEEee
Q 002401 182 VCQR----HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA--------GIIHCDLKPENILLCT 248 (927)
Q Consensus 182 ~~~~----~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~--------gIVHrDLKPeNILL~~ 248 (927)
..+. .++||.+|.+ |+|+|+|... .++.+...+++..++.||++||.. .|.|||||..||||
T Consensus 275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV-- 349 (513)
T KOG2052|consen 275 NKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV-- 349 (513)
T ss_pred ccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE--
Confidence 5432 6999999998 8999999885 499999999999999999999942 49999999999999
Q ss_pred cCCCCeEEEeecCCccccc-------ccceeeccCCCCCCcchhcCCC----CC--chhHHHHHHHHHHHHHh
Q 002401 249 SVKPAEIKIIDFGSACTED-------RTVYSYIQSRYYRSPEVLLGYQ----YT--TAIDMWSFGCIVAELFL 308 (927)
Q Consensus 249 ~~~~g~IKL~DFGlA~~~~-------~~~~~~~gT~~Y~APEvl~~~~----ys--~ksDIWSLG~ILyELlT 308 (927)
.+++.+.|+|+|+|.... ......+||..|||||++...- +. ..+||||||+|+||++-
T Consensus 350 -Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 350 -KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred -ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 578999999999995433 2345679999999999997642 22 46999999999999985
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=7.7e-27 Score=233.81 Aligned_cols=180 Identities=39% Similarity=0.601 Sum_probs=157.0
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecc
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL 194 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~ 194 (927)
||+|.+|.||++.+..+++.+++|++..... ..+.+.+|+++++.+. |++|+++++++......++|||++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~-------~~~i~~~~~~~~~~~~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN-------HPNIVKLYGVFEDENHLYLVMEYC 73 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC-------CCCeeeEeeeeecCCeEEEEEecC
Confidence 6899999999999988899999999986643 3567889999999984 689999999999999999999999
Q ss_pred c-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccccc---c
Q 002401 195 D-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT---V 270 (927)
Q Consensus 195 ~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~---~ 270 (927)
. ++|.+++.... ..+++..++.++.+|+++|++||+++++|+||+|.||+++. ..+.++|+||+.+...... .
T Consensus 74 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--~~~~~~l~d~~~~~~~~~~~~~~ 150 (215)
T cd00180 74 EGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGLSKLLTSDKSLL 150 (215)
T ss_pred CCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--CCCcEEEecCCceEEccCCcchh
Confidence 9 68888887652 35899999999999999999999999999999999999952 1688999999999755443 3
Q ss_pred eeeccCCCCCCcchhcCC-CCCchhHHHHHHHHHHHH
Q 002401 271 YSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAEL 306 (927)
Q Consensus 271 ~~~~gT~~Y~APEvl~~~-~ys~ksDIWSLG~ILyEL 306 (927)
........|++||.+... .++.+.|+|+||+++++|
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 445678889999999887 888999999999999998
No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-29 Score=286.99 Aligned_cols=257 Identities=28% Similarity=0.464 Sum_probs=208.2
Q ss_pred cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
-+++|+++.++|.|+||.||+|+|+.+++..|+|+++... ..+.-...||-+++.. .|+|||.+++.+...+
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc-------~h~nivay~gsylr~d 85 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC-------RHPNIVAYFGSYLRRD 85 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC-------CCcChHHHHhhhhhhc
Confidence 3489999999999999999999999999999999999764 3455566788888887 5899999999999999
Q ss_pred eeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.++|+||||++ +|.+..... ..+++.++..+++..+++|+|||+.|-+|||||-.|||++ +.+.+||+|||.+.
T Consensus 86 klwicMEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsa 160 (829)
T KOG0576|consen 86 KLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSA 160 (829)
T ss_pred CcEEEEEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchh
Confidence 99999999985 666554333 5799999999999999999999999999999999999995 67899999999987
Q ss_pred ccccc---ceeeccCCCCCCcchhc---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHH
Q 002401 265 TEDRT---VYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (927)
Q Consensus 265 ~~~~~---~~~~~gT~~Y~APEvl~---~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l 338 (927)
..... ...++||++|||||+.. ...|...+|||++|+...||-.-.+|.-.......+..+.+- +..||
T Consensus 161 qitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS-~~qpp---- 235 (829)
T KOG0576|consen 161 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS-GFQPP---- 235 (829)
T ss_pred hhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc-CCCCC----
Confidence 65533 34579999999999874 447999999999999999998877776444443333333221 11221
Q ss_pred HHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhh
Q 002401 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (927)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~ 418 (927)
.|++
T Consensus 236 ----------------------------------------------------------~lkD------------------ 239 (829)
T KOG0576|consen 236 ----------------------------------------------------------TLKD------------------ 239 (829)
T ss_pred ----------------------------------------------------------cccC------------------
Confidence 1111
Q ss_pred hhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 419 e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
....++.|-+|++.+|..+|+||||++-+|+|||+...
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 11234578899999999999999999999999999864
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-28 Score=257.35 Aligned_cols=198 Identities=21% Similarity=0.332 Sum_probs=170.8
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE-Eeecce
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY-FVCQRH 186 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~-f~~~~~ 186 (927)
.+.|.|.+.||+|.||.+.+|+++.++..+|+|.+........++.+|...--.|. .|.||+.-|++ |+..+.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls------~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLS------PHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeec------cchhhhHHHHHHhhcCce
Confidence 37899999999999999999999999999999999987777777888877655554 58899988875 677789
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+++++||++ |+|..-+.. .++-|...++++.||+.||.|||++++||||||.+||||-.. +..+|||||||..+.
T Consensus 97 YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRK 172 (378)
T ss_pred EEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeecccccc
Confidence 999999998 788776554 468899999999999999999999999999999999999654 445999999999988
Q ss_pred ccccceeeccCCCCCCcchhcCC-----CCCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 266 EDRTVYSYIQSRYYRSPEVLLGY-----QYTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 266 ~~~~~~~~~gT~~Y~APEvl~~~-----~ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
.+.......-+..|.+||+.... ...+..|||.||+|+|.++||++||..
T Consensus 173 ~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk 227 (378)
T KOG1345|consen 173 VGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK 227 (378)
T ss_pred cCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh
Confidence 87776666667789999988643 367889999999999999999999963
No 401
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-27 Score=277.47 Aligned_cols=200 Identities=24% Similarity=0.352 Sum_probs=168.3
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCe----EEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNS----FVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~----~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
..+..++||+|+||+||++.....++ .||||++.... ....++++|+-+|.+| +|||+++|++++..
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-------dHpnl~RLLgvc~~ 769 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-------DHPNLLRLLGVCML 769 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-------CCchHHHHhhhccc
Confidence 44567899999999999997654444 68999987643 3467888999999988 79999999999987
Q ss_pred cceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 184 ~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.. +-||++||+ |.|+|+++..+ ..+-.+..+.|..||++||.|||++++|||||-..|||| .....+||.|||+
T Consensus 770 s~-~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgl 844 (1177)
T KOG1025|consen 770 ST-LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGL 844 (1177)
T ss_pred ch-HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecch
Confidence 66 889999998 79999999875 568899999999999999999999999999999999999 4778999999999
Q ss_pred cccccccceee---cc--CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 002401 263 ACTEDRTVYSY---IQ--SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL 321 (927)
Q Consensus 263 A~~~~~~~~~~---~g--T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~ 321 (927)
|+........+ .+ .+.|||=|.+....|+.++|||||||++|||+| |..|+.+....++
T Consensus 845 a~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI 909 (1177)
T KOG1025|consen 845 AKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI 909 (1177)
T ss_pred hhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh
Confidence 97543222221 22 456899999999999999999999999999998 9999987665443
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=3e-26 Score=235.44 Aligned_cols=206 Identities=33% Similarity=0.513 Sum_probs=174.3
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
|.+.+.||.|+++.||++.+..+++.+|||++..... ..+.+.+|++.++.+ .|+||+++++++......+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-------~~~~i~~~~~~~~~~~~~~ 73 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-------KHPNIVKLYGVFEDPEPLY 73 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-------CCCChhhheeeeecCCceE
Confidence 5678999999999999999998899999999986532 466788899998888 4789999999999989999
Q ss_pred EEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 189 ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 189 LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
+|+|++.+ +|.+++..... .+++..+..++.+++.+|.+||+++++|+||+|.||+++ ..+.++|+|||.+....
T Consensus 74 ~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~~~~ 149 (225)
T smart00221 74 LVMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLARFIH 149 (225)
T ss_pred EEEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceeeEec
Confidence 99999986 89888876541 289999999999999999999999999999999999995 45899999999987554
Q ss_pred cc----ceeeccCCCCCCcchh-cCCCCCchhHHHHHHHHHHHHHhCCCCCCC-CCHH-HHHHHHHH
Q 002401 268 RT----VYSYIQSRYYRSPEVL-LGYQYTTAIDMWSFGCIVAELFLGLPLFPG-ASEF-DLLRRMIR 327 (927)
Q Consensus 268 ~~----~~~~~gT~~Y~APEvl-~~~~ys~ksDIWSLG~ILyELlTG~~PF~g-~s~~-d~l~~I~~ 327 (927)
.. .....++..|++||.+ ....++.++|||+|||++++|++|+.||.. .+.. .+.+.|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~ 216 (225)
T smart00221 150 RDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSF 216 (225)
T ss_pred CcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhc
Confidence 33 2455778889999998 556788899999999999999999999977 3443 44444443
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=1.2e-27 Score=295.71 Aligned_cols=142 Identities=18% Similarity=0.235 Sum_probs=114.9
Q ss_pred CceeEEEEEE-------eecceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 172 HHIVRIYEYF-------VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 172 pnIVrl~~~f-------~~~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
+||++++++| ...+.++++||+++++|.+++.... ..+++.+++.|++||++||+|||++|||||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 4677777777 2334688999999999999997543 4599999999999999999999999999999999999
Q ss_pred EEee----------------cCCCCeEEEeecCCccccccc-------------------ceeeccCCCCCCcchhcCCC
Q 002401 245 LLCT----------------SVKPAEIKIIDFGSACTEDRT-------------------VYSYIQSRYYRSPEVLLGYQ 289 (927)
Q Consensus 245 LL~~----------------~~~~g~IKL~DFGlA~~~~~~-------------------~~~~~gT~~Y~APEvl~~~~ 289 (927)
||+. .+....+||+|||+++..... ....++|++|+|||++.+..
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 191 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS 191 (793)
T ss_pred EEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC
Confidence 9952 123456788888887532110 01135788999999999999
Q ss_pred CCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 290 YTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 290 ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
|+.++||||||||||||+++.+||.
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchh
Confidence 9999999999999999999888764
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=1.3e-24 Score=218.27 Aligned_cols=108 Identities=25% Similarity=0.309 Sum_probs=93.4
Q ss_pred chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccceeecc
Q 002401 196 SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQ 275 (927)
Q Consensus 196 GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~~~~g 275 (927)
|+|.+++.... ..+++.+++.|+.||+.||+|||+++ ||+|||++ .++.+|+ ||++....... ..+
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~--~~g 66 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ--SRV 66 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc--CCC
Confidence 57888887643 46999999999999999999999998 99999994 6678888 99987654332 368
Q ss_pred CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 276 T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
++.|+|||++.+..|+.++||||||||+|||++|+.||....
T Consensus 67 ~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~ 108 (176)
T smart00750 67 DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEER 108 (176)
T ss_pred cccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 899999999999999999999999999999999999996543
No 405
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=2.9e-22 Score=210.14 Aligned_cols=196 Identities=36% Similarity=0.560 Sum_probs=163.4
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~----~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
|++.+.||.|+|+.||++.+. ..+++|.+..... ....+.+|+.++..+.+ +++|+++++++.....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~------~~~i~~~~~~~~~~~~ 72 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNH------PPNIVKLYDFFQDEGS 72 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccC------CcceeeEEEEEecCCE
Confidence 788999999999999999887 7799999975432 45678889998888842 3379999999988788
Q ss_pred eEEEEecccc-hhHHHHHhhcc-CCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC-eEEEeecCCc
Q 002401 187 LCICFELLDS-NLYELIKINHF-RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSA 263 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~-~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g-~IKL~DFGlA 263 (927)
.++|+|++.+ .+.+++..... ..+.+..+..++.|++.+|.|+|+.+++||||||+||+++ ... .++|+|||.+
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~ 149 (384)
T COG0515 73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLA 149 (384)
T ss_pred EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcc
Confidence 8999999985 66655544321 2589999999999999999999999999999999999995 444 7999999998
Q ss_pred ccccc---------cceeeccCCCCCCcchhcC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCH
Q 002401 264 CTEDR---------TVYSYIQSRYYRSPEVLLG---YQYTTAIDMWSFGCIVAELFLGLPLFPGASE 318 (927)
Q Consensus 264 ~~~~~---------~~~~~~gT~~Y~APEvl~~---~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~ 318 (927)
..... .....+++..|+|||.+.+ ..+....|+|++|+++++++++..||.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~ 216 (384)
T COG0515 150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216 (384)
T ss_pred eecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 64332 2356688999999999988 5788999999999999999999999876653
No 406
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.90 E-value=9.2e-24 Score=230.34 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=164.1
Q ss_pred CCceEEEEEeccCCceeEEEeeccCC-----CeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEM-----NSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEY 180 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~t-----g~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~ 180 (927)
+.|+++..++-+|.||.||.+..++. .+.|-+|.++.... ....++.|--+|..+ .|+|+..+.++
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~-------sH~nll~V~~V 355 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA-------SHPNLLSVLGV 355 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC-------cCCCccceeEE
Confidence 36788899999999999999965433 23466676665432 223344444444443 69999999998
Q ss_pred Eeec-ceeEEEEeccc-chhHHHHHhhc------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCC
Q 002401 181 FVCQ-RHLCICFELLD-SNLYELIKINH------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP 252 (927)
Q Consensus 181 f~~~-~~l~LVmEy~~-GsL~dlL~~~~------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~ 252 (927)
+.++ ...++++.+++ |+|..++...+ .+.++..++..++.||+.|++|||+++|||.||...|++| ++.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhh
Confidence 8755 46788888888 89999988443 2347778889999999999999999999999999999999 467
Q ss_pred CeEEEeecCCcccccccceeecc-----CCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 002401 253 AEIKIIDFGSACTEDRTVYSYIQ-----SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI 326 (927)
Q Consensus 253 g~IKL~DFGlA~~~~~~~~~~~g-----T~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT-G~~PF~g~s~~d~l~~I~ 326 (927)
-++||+|=.+++..-...+...| ...||++|.+....|+.++|+|||||+||||+| |+.|+...+.+++...+.
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk 512 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK 512 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence 89999999988765444343333 456999999999999999999999999999998 999998888777655544
Q ss_pred H
Q 002401 327 R 327 (927)
Q Consensus 327 ~ 327 (927)
+
T Consensus 513 d 513 (563)
T KOG1024|consen 513 D 513 (563)
T ss_pred c
Confidence 3
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=7.6e-23 Score=227.63 Aligned_cols=212 Identities=25% Similarity=0.281 Sum_probs=174.8
Q ss_pred ceEEEEEeccCCceeEEEeeccCCC-eEEEEEEEeCChhh-HHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE-eecce
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAY-YQQALVEVSILTTLNKKYDREDKHHIVRIYEYF-VCQRH 186 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg-~~VAIKiik~~~~~-~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f-~~~~~ 186 (927)
+|++.++||+|+||.||+|.+..++ +.+|+|+....... ...+..|+.+|..+.. .....++..+++.. .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~---~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK---KNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh---hcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999988775 67999998764221 1267789999999964 11245899999999 47788
Q ss_pred eEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC--CCCeEEEeecCCcc
Q 002401 187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV--KPAEIKIIDFGSAC 264 (927)
Q Consensus 187 l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~--~~g~IKL~DFGlA~ 264 (927)
.+|||++++.+|.++.+....+.++..++..|+.|++.+|++||+.|+|||||||+|+++.... ....+.|.|||+++
T Consensus 96 ~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 96 NFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred eEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 9999999999999988776667899999999999999999999999999999999999997442 12579999999997
Q ss_pred --cc----cc------c-ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 002401 265 --TE----DR------T-VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRR 324 (927)
Q Consensus 265 --~~----~~------~-~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~ 324 (927)
.. .. . .....||..|+++++..+...+.+.|+||++.++.||+.|..||.+........+
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~ 248 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK 248 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH
Confidence 21 10 1 1234589999999999999999999999999999999999999977654333333
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=6.6e-23 Score=212.55 Aligned_cols=205 Identities=22% Similarity=0.299 Sum_probs=177.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+|+++++||.|+||.+|++.....|+.||||+-.++.. ..+...|.++.+.|+. ...|..+..++.++.+-+
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~------g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQG------GVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhcc------CCCCchhhhhccccccce
Confidence 799999999999999999999999999999999876543 3466789999999964 567888888999999999
Q ss_pred EEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc-
Q 002401 189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED- 267 (927)
Q Consensus 189 LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~- 267 (927)
+|||+++.+|.+++.... +.++..++..++-|++.-|+|+|.+++|||||||+|+|+..+....++.|+|||+|+..-
T Consensus 88 lVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred eeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999999999999887765 569999999999999999999999999999999999999877777889999999996422
Q ss_pred ---------ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 002401 268 ---------RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL 321 (927)
Q Consensus 268 ---------~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~ 321 (927)
.......||..|.+=....+...+...|+-|+|.+|..+.-|..||.+......
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk 229 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK 229 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH
Confidence 122345789999998888888889999999999999999999999998654433
No 409
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=4.8e-24 Score=254.53 Aligned_cols=194 Identities=28% Similarity=0.389 Sum_probs=151.8
Q ss_pred EEEEEeccCCceeEEEeeccCCCeEEEEEEEe----CChh---hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----NQPA---YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 112 ~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik----~~~~---~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
....++|.|++|.|+.+......+.++.|.++ .... ....+..|+.+-..| .|+||+..+..+.+.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-------~h~~~~e~l~~~~~~ 393 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-------SHPNIIETLDIVQEI 393 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-------cCCchhhhHHHHhhc
Confidence 45678999999988888777776666666554 1111 111122333333333 689998888777776
Q ss_pred ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 185 ~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
....-+||||.++|+.++... ..+...++..+++||+.||+|||+.||.|||||++||+++ ..+.+||+|||.+.
T Consensus 394 ~~~~~~mE~~~~Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~ 468 (601)
T KOG0590|consen 394 DGILQSMEYCPYDLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAAS 468 (601)
T ss_pred ccchhhhhcccHHHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcce
Confidence 666666999999999988875 2588999999999999999999999999999999999995 66799999999984
Q ss_pred ccc-------ccceeeccCCCCCCcchhcCCCCCc-hhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 265 TED-------RTVYSYIQSRYYRSPEVLLGYQYTT-AIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 265 ~~~-------~~~~~~~gT~~Y~APEvl~~~~ys~-ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
... ......+|+..|+|||++.+..|++ ..||||.|+|++.|++|+.||....
T Consensus 469 vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~ 529 (601)
T KOG0590|consen 469 VFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAK 529 (601)
T ss_pred eeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccc
Confidence 321 1233468899999999999999985 7999999999999999999996543
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=2.3e-21 Score=208.61 Aligned_cols=219 Identities=21% Similarity=0.282 Sum_probs=183.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
-.|+|.++||+|.||+++++++.-+++.||||.-.... ...+...|.+..+.|. ..+.|..+|-+..+..+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~------g~~GIP~vYYFGqeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLG------GTEGIPQVYYFGQEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHc------CCCCCCceeeeccccchhh
Confidence 48999999999999999999999999999999876432 2456778999999996 4789999999999999999
Q ss_pred EEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEee--cCCCCeEEEeecCCcccc
Q 002401 189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT--SVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 189 LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~--~~~~g~IKL~DFGlA~~~ 266 (927)
||+|+++.+|.|++.-.. +.|+.+++..++.||+.-++|+|++.+|.|||||+|+||.. ..+...|.|+|||+|+..
T Consensus 101 LVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 101 LVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred hhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 999999999999888765 67999999999999999999999999999999999999963 234567999999999643
Q ss_pred cc----------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHHHhCCCC
Q 002401 267 DR----------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA---SEFDLLRRMIRILGAQP 333 (927)
Q Consensus 267 ~~----------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~---s~~d~l~~I~~~lG~~P 333 (927)
.+ ......||..||+=...++.+.+.+.|+-|||-++.+.|-|..||.|. +..+..++|-+.....|
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~ 259 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTP 259 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCC
Confidence 22 233457899999999999999999999999999999999999999875 34455555544433333
Q ss_pred Ch
Q 002401 334 PD 335 (927)
Q Consensus 334 P~ 335 (927)
.+
T Consensus 260 i~ 261 (449)
T KOG1165|consen 260 IE 261 (449)
T ss_pred HH
Confidence 33
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2.2e-21 Score=218.98 Aligned_cols=167 Identities=22% Similarity=0.277 Sum_probs=126.5
Q ss_pred CceEEEEEeccCCceeEEEeeccC-CCeEEEEEEEeCC------hhhHHHHHHHHHHHHHHhhhcCCCCCCcee-EEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-MNSFVAVKIIKNQ------PAYYQQALVEVSILTTLNKKYDREDKHHIV-RIYEY 180 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-tg~~VAIKiik~~------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIV-rl~~~ 180 (927)
.+|++.++||+|+||+||+|++.. +++.||||++... ......+.+|+++|+.|+ |+||+ +++++
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-------h~~iv~~l~~~ 90 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-------GIGVVPQLLAT 90 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-------CCCCCcEEEEc
Confidence 789999999999999999998876 6788899987532 223556889999999994 67877 45542
Q ss_pred EeecceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccC-CCCCEEEeecCCCCeEEEee
Q 002401 181 FVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDL-KPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 181 f~~~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDL-KPeNILL~~~~~~g~IKL~D 259 (927)
+..||||||++|..+..+. . .. ...++.||+++|.|||++||+|||| ||+|||++ .++.+||+|
T Consensus 91 ----~~~~LVmE~~~G~~L~~~~--~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiD 155 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHLAR--P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVID 155 (365)
T ss_pred ----CCcEEEEEccCCCCHHHhC--c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEE
Confidence 4689999999864333221 1 11 2467899999999999999999999 99999994 557899999
Q ss_pred cCCccccccc-----------ceeeccCCCCCCcchhcCCC------CCchhHHH
Q 002401 260 FGSACTEDRT-----------VYSYIQSRYYRSPEVLLGYQ------YTTAIDMW 297 (927)
Q Consensus 260 FGlA~~~~~~-----------~~~~~gT~~Y~APEvl~~~~------ys~ksDIW 297 (927)
||+|+..... .....++..|+|||.+.... .+...|-|
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9999643221 12345678899999996432 33446766
No 412
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.84 E-value=1.5e-21 Score=233.87 Aligned_cols=193 Identities=27% Similarity=0.398 Sum_probs=148.2
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+|...+.||.+.|=+|.+|++.+. .|+||++-+.. ...+.+.++++-++... ..+||++.+.-+...++..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l-----~~~pn~lPfqk~~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRLEEIKFAL-----MKAPNCLPFQKVLVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHHHHHHHHh-----hcCCcccchHHHHHhhHHH
Confidence 567788999999999999977654 38999986543 22333333333333221 1589999998888888889
Q ss_pred EEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc--
Q 002401 188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT-- 265 (927)
Q Consensus 188 ~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~-- 265 (927)
|||-+|+..+|+|.+.-+.+ +.+.+.+.|+.||+.||.-+|+.||+|+|||.|||||+ .-+-+.|+||..-+.
T Consensus 97 ylvRqyvkhnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtY 171 (1431)
T KOG1240|consen 97 YLVRQYVKHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTY 171 (1431)
T ss_pred HHHHHHHhhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCcc
Confidence 99999999999999877653 78888999999999999999999999999999999996 557789999986532
Q ss_pred --ccc--cceeecc----CCCCCCcchhcCC----------C-CCchhHHHHHHHHHHHHHh-CCCCCC
Q 002401 266 --EDR--TVYSYIQ----SRYYRSPEVLLGY----------Q-YTTAIDMWSFGCIVAELFL-GLPLFP 314 (927)
Q Consensus 266 --~~~--~~~~~~g----T~~Y~APEvl~~~----------~-ys~ksDIWSLG~ILyELlT-G~~PF~ 314 (927)
.+. ....+.. ...|+|||.+... . .+++.||||+||+++||++ |++||.
T Consensus 172 LPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 172 LPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred CCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 111 1112222 3459999998541 1 5789999999999999998 799993
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.83 E-value=8.7e-21 Score=227.52 Aligned_cols=221 Identities=24% Similarity=0.377 Sum_probs=167.3
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
.+|..+++|..|+||.||.++++.+.+.+|+|+-+++ ...+. ||... +.|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~-lilRn------ilt~a-------~npfvv------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN-LILRN------ILTFA-------GNPFVV------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccc-hhhhc------ccccc-------CCccee-------------
Confidence 6899999999999999999999999999999654432 11110 11111 233333
Q ss_pred EEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 189 LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
|+-..+++.- +.++.. ++.+++|||+.||||||+||+|++|+ .-+.+||+|||+.+....
T Consensus 136 -------gDc~tllk~~--g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 -------GDCATLLKNI--GPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred -------chhhhhcccC--CCCcch--------hhHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhh
Confidence 3333444332 234433 27899999999999999999999996 669999999999842110
Q ss_pred ------------------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 002401 269 ------------------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG 330 (927)
Q Consensus 269 ------------------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG 330 (927)
.....+||+.|+|||++..+.|...+|.|++|+|+||.+.|+.||-+++.++++..++....
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i 275 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI 275 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc
Confidence 12345899999999999999999999999999999999999999999999988887765433
Q ss_pred CCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCC
Q 002401 331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN 410 (927)
Q Consensus 331 ~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ 410 (927)
..|+.
T Consensus 276 -~wpE~-------------------------------------------------------------------------- 280 (1205)
T KOG0606|consen 276 -EWPEE-------------------------------------------------------------------------- 280 (1205)
T ss_pred -ccccc--------------------------------------------------------------------------
Confidence 10000
Q ss_pred CChhhhhhhhhhHHHHHHHHHhccccCcCCCC---CHHHHHhCCCcCCCCCC
Q 002401 411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRW---SPFQASRHPFVTGEPFT 459 (927)
Q Consensus 411 ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRp---TA~EaLqHPwf~~~~~~ 459 (927)
.....+++.|||.++|+.+|..|. .+-|+.+|+||+...|+
T Consensus 281 --------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 281 --------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred --------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 011235789999999999999996 56788999999998877
No 414
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.9e-21 Score=224.31 Aligned_cols=241 Identities=23% Similarity=0.378 Sum_probs=190.9
Q ss_pred EeccCCceeEEEeec---cCCCeEEEEEEEeCChh---hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEE
Q 002401 116 LLGHGTFGQVAKCWD---AEMNSFVAVKIIKNQPA---YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI 189 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d---~~tg~~VAIKiik~~~~---~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~L 189 (927)
.+|+|+||.|++++. ...+..+|+|+.++... .......|-.++..++ .|+.+|++...|+.+..+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~------~~~f~v~lhyafqt~~kl~l 74 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH------NTPFLVKLHYAFQTDGKLYL 74 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc------CCCceeeeeeeeccccchhH
Confidence 379999999998753 34577899999875321 1113445667777664 48999999999999999999
Q ss_pred EEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 190 CFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 190 VmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
++++..| .|...+... ..+.+..++.+...++-+|+++|+.+|+|||+|++||++ +..|.||+.|||+++..-+
T Consensus 75 ~ld~~rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 75 ILDFLRGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred hhhhcccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHh
Confidence 9999985 666555444 358899999999999999999999999999999999999 5789999999999975433
Q ss_pred cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhh
Q 002401 269 TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFF 348 (927)
Q Consensus 269 ~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f 348 (927)
.... |||..|||||++. ....++|.||||++++||+||..||.+ +....|.+..- .
T Consensus 150 ~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~-~---------------- 205 (612)
T KOG0603|consen 150 EKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAEL-E---------------- 205 (612)
T ss_pred hhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhcc-C----------------
Confidence 3222 9999999999998 678899999999999999999999976 44444433111 0
Q ss_pred hhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHH
Q 002401 349 KCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVD 428 (927)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~D 428 (927)
.....+..+.+
T Consensus 206 ---------------------------------------------------------------------~p~~l~~~a~~ 216 (612)
T KOG0603|consen 206 ---------------------------------------------------------------------MPRELSAEARS 216 (612)
T ss_pred ---------------------------------------------------------------------CchhhhHHHHH
Confidence 01123457889
Q ss_pred HHHhccccCcCCCCCH-----HHHHhCCCcCCCCCCC
Q 002401 429 FLKGLVEFDPAKRWSP-----FQASRHPFVTGEPFTC 460 (927)
Q Consensus 429 LI~kML~~DP~kRpTA-----~EaLqHPwf~~~~~~~ 460 (927)
++..|+..+|..|.-+ .|+++|+||....+..
T Consensus 217 ~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~ 253 (612)
T KOG0603|consen 217 LFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNE 253 (612)
T ss_pred HHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhh
Confidence 9999999999999855 7999999999876653
No 415
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=1.9e-20 Score=205.06 Aligned_cols=208 Identities=22% Similarity=0.292 Sum_probs=150.8
Q ss_pred eeeccccCCceEEEEEeccCCceeEEEeeccCCCe-----------------------------------EEEEEEEeCC
Q 002401 101 VLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNS-----------------------------------FVAVKIIKNQ 145 (927)
Q Consensus 101 ~l~~~~~~~rY~i~~~LG~GsfG~Vyka~d~~tg~-----------------------------------~VAIKiik~~ 145 (927)
.+....+.++|+|.+.||+|....||.|....++. ..|||.+-+-
T Consensus 149 r~dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~ 228 (598)
T KOG4158|consen 149 RIDSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNF 228 (598)
T ss_pred hhhcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccc
Confidence 34444556899999999999999999986543211 2455655321
Q ss_pred hhhHHHHHHHHHHHHHHhhh-------------------------cCCCCCCceeEEEEEEeec----------------
Q 002401 146 PAYYQQALVEVSILTTLNKK-------------------------YDREDKHHIVRIYEYFVCQ---------------- 184 (927)
Q Consensus 146 ~~~~~~~~~Ei~iL~~L~~~-------------------------~~~~~HpnIVrl~~~f~~~---------------- 184 (927)
+.. -....||+.+.+. .....|||||++..+|.++
T Consensus 229 ~~~----s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp 304 (598)
T KOG4158|consen 229 EHD----SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALP 304 (598)
T ss_pred ccC----CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCccccc
Confidence 100 0122233332211 0114699999999988653
Q ss_pred -----------ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC-CC
Q 002401 185 -----------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV-KP 252 (927)
Q Consensus 185 -----------~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~-~~ 252 (927)
..+|+||..+..+|.+++..+. .+....+.|+.|+++|+.|||++||.|||||.+|||+..++ .-
T Consensus 305 ~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~ 381 (598)
T KOG4158|consen 305 ARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEI 381 (598)
T ss_pred ceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCC
Confidence 2589999999999999998765 77888899999999999999999999999999999997543 33
Q ss_pred CeEEEeecCCcccccc---------cceeeccCCCCCCcchhcCCC-----C-CchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 253 AEIKIIDFGSACTEDR---------TVYSYIQSRYYRSPEVLLGYQ-----Y-TTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 253 g~IKL~DFGlA~~~~~---------~~~~~~gT~~Y~APEvl~~~~-----y-s~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
..+.|+|||++.-.+. .....-|...-||||+....+ . -.|+|.|+.|.+.||+++...||.+
T Consensus 382 P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~ 459 (598)
T KOG4158|consen 382 PQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK 459 (598)
T ss_pred cEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence 5789999999842221 111234566789999997543 2 2589999999999999999999976
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.82 E-value=2.4e-20 Score=203.35 Aligned_cols=204 Identities=21% Similarity=0.262 Sum_probs=132.7
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHHhhhcCC---CCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDR---EDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~---~~HpnIVrl~~~f 181 (927)
..++..+.||.|+++.||.+.|..|++.+|||++.... ...+++.+|.-....+....+. ..|-.++..++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 45677889999999999999999999999999986321 2334444444322221110000 0011233333433
Q ss_pred eec------------c-----eeEEEEecccchhHHHHHh---hccC--CCCHHHHHHHHHHHHHHHhhhccCCeeeccC
Q 002401 182 VCQ------------R-----HLCICFELLDSNLYELIKI---NHFR--GLSLSIVQLFSKQILRGLSLLKDAGIIHCDL 239 (927)
Q Consensus 182 ~~~------------~-----~l~LVmEy~~GsL~dlL~~---~~~~--~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDL 239 (927)
... . ..+++|+-+.++|.+++.. .... .+.......+..|+++.+++||..||||+||
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 221 1 3478999999888877653 2211 1223333456689999999999999999999
Q ss_pred CCCCEEEeecCCCCeEEEeecCCcccccccceeeccCCCCCCcchhcC--------CCCCchhHHHHHHHHHHHHHhCCC
Q 002401 240 KPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG--------YQYTTAIDMWSFGCIVAELFLGLP 311 (927)
Q Consensus 240 KPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~~~~gT~~Y~APEvl~~--------~~ys~ksDIWSLG~ILyELlTG~~ 311 (927)
||+|+|+ +.+|.++|+||+.....+........+..|.+||+... ..++.+.|.|+||+++|.|+++..
T Consensus 172 ~~~nfll---~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLL---DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE----TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEE---cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 9999999 47899999999988766665444445677999998754 258899999999999999999999
Q ss_pred CCCC
Q 002401 312 LFPG 315 (927)
Q Consensus 312 PF~g 315 (927)
||..
T Consensus 249 Pf~~ 252 (288)
T PF14531_consen 249 PFGL 252 (288)
T ss_dssp STCC
T ss_pred CCCC
Confidence 9964
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.2e-19 Score=192.69 Aligned_cols=168 Identities=10% Similarity=0.137 Sum_probs=126.4
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHH------HHHHHHHHHHHhhhcCCCCCCceeEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQ------ALVEVSILTTLNKKYDREDKHHIVRI 177 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~----~~~~~------~~~Ei~iL~~L~~~~~~~~HpnIVrl 177 (927)
.++|+++++||.|+||.||++.+ ++..+|||++.... ..... +.+|++.+.+|. |++|..+
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-------~~GI~~~ 100 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-------SEGLASL 100 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-------HCCCCcc
Confidence 48999999999999999999755 46679999997432 22222 468888999984 6788888
Q ss_pred EEEEeec--------ceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEee
Q 002401 178 YEYFVCQ--------RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT 248 (927)
Q Consensus 178 ~~~f~~~--------~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~ 248 (927)
.+++... ...+|||||++| +|.++. .+++ ..+.+|+.+|..||+.||+||||||.||+++
T Consensus 101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~- 169 (232)
T PRK10359 101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS- 169 (232)
T ss_pred eEeeeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe-
Confidence 8886643 358999999997 666652 1333 2466999999999999999999999999995
Q ss_pred cCCCCeEEEeecCCcccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHH
Q 002401 249 SVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELF 307 (927)
Q Consensus 249 ~~~~g~IKL~DFGlA~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELl 307 (927)
.++ ++|+|||........... -.+++...|+.++|||+||+++..+.
T Consensus 170 --~~g-i~liDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 --KNG-LRIIDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred --CCC-EEEEECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence 345 999999987543221111 11444556788999999999887654
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=2.2e-19 Score=185.81 Aligned_cols=138 Identities=20% Similarity=0.160 Sum_probs=103.1
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhh---------------------------HHHHHHHHHHHHHHhhhc
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---------------------------YQQALVEVSILTTLNKKY 166 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~---------------------------~~~~~~Ei~iL~~L~~~~ 166 (927)
.++||+|+||.||+|.+. +|+.||||+++..... ......|+++|..+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999987 8999999999754210 112345999999996421
Q ss_pred CCCCCCceeEEEEEEeecceeEEEEecccchh-HHHHHhhccCCCCHHHHHHHHHHHHHHHhhh-ccCCeeeccCCCCCE
Q 002401 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNL-YELIKINHFRGLSLSIVQLFSKQILRGLSLL-KDAGIIHCDLKPENI 244 (927)
Q Consensus 167 ~~~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL-~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yL-Hs~gIVHrDLKPeNI 244 (927)
..+|+++ .. ...+|||||++|+. ...+.. ...+++..+..++.||+.+|.+| |+.||+||||||+||
T Consensus 81 --v~~p~~~------~~-~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NI 149 (190)
T cd05147 81 --IPCPEPI------LL-KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNL 149 (190)
T ss_pred --CCCCcEE------Ee-cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 0123332 11 22389999999743 333222 24689999999999999999999 799999999999999
Q ss_pred EEeecCCCCeEEEeecCCccccc
Q 002401 245 LLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 245 LL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|++ ++.++|+|||+|...+
T Consensus 150 li~----~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 150 LYH----DGKLYIIDVSQSVEHD 168 (190)
T ss_pred EEE----CCcEEEEEccccccCC
Confidence 995 3679999999996543
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=2.4e-18 Score=177.40 Aligned_cols=137 Identities=21% Similarity=0.194 Sum_probs=104.3
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhh---------------------------HHHHHHHHHHHHHHhhhc
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY---------------------------YQQALVEVSILTTLNKKY 166 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~---------------------------~~~~~~Ei~iL~~L~~~~ 166 (927)
.+.||+|+||+||+|++. +|+.||||+++..... ......|++.+.++.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-- 78 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE-- 78 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh--
Confidence 468999999999999987 8999999999854210 1123568888888853
Q ss_pred CCCCCCceeEEEEEEeecceeEEEEecccch-hHHH-HHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCC
Q 002401 167 DREDKHHIVRIYEYFVCQRHLCICFELLDSN-LYEL-IKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPEN 243 (927)
Q Consensus 167 ~~~~HpnIVrl~~~f~~~~~l~LVmEy~~Gs-L~dl-L~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeN 243 (927)
++|.....+... ..||||||++|. +... +.. ..+++..+..++.||+.+|.+||. +||+||||||+|
T Consensus 79 -----~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~N 148 (190)
T cd05145 79 -----AGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYN 148 (190)
T ss_pred -----CCCCCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhh
Confidence 444332222222 248999999874 3332 322 357889999999999999999999 999999999999
Q ss_pred EEEeecCCCCeEEEeecCCccccc
Q 002401 244 ILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 244 ILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
||++ ++.++|+|||++....
T Consensus 149 Ill~----~~~~~liDFG~a~~~~ 168 (190)
T cd05145 149 ILYH----DGKPYIIDVSQAVELD 168 (190)
T ss_pred EEEE----CCCEEEEEcccceecC
Confidence 9994 5789999999996544
No 420
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=9.3e-19 Score=214.07 Aligned_cols=195 Identities=23% Similarity=0.378 Sum_probs=158.6
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
...|.|.+.||+|+||+||+|.... ++.||||+-+-...+ ++..-.+++.+|+ ..--+.|..+..++...+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W--EfYI~~q~~~RLk----~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW--EFYICLQVMERLK----PQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce--eeeehHHHHHhhc----hhhhcchHHHHHHHccCCcc
Confidence 4799999999999999999998877 999999998743221 1222233344442 11235677777777888889
Q ss_pred EEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEee----cCCCCeEEEeecCC
Q 002401 188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT----SVKPAEIKIIDFGS 262 (927)
Q Consensus 188 ~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~----~~~~g~IKL~DFGl 262 (927)
+||+||.+ |+|++++. ..+.+++..+..|+.|||..|+.||..+|||+||||+|+||.. +....-|+|+|||.
T Consensus 770 ~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 99999998 89999998 3457999999999999999999999999999999999999953 23356799999999
Q ss_pred ccc-----ccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCC
Q 002401 263 ACT-----EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLP 311 (927)
Q Consensus 263 A~~-----~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~ 311 (927)
+.. ........++|-.+-.+|+..+..++..+|.|.|+.+++.||.|+.
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 953 2234556678889999999999999999999999999999999863
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=9.2e-18 Score=175.51 Aligned_cols=181 Identities=17% Similarity=0.130 Sum_probs=135.7
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHH-----HHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ-----QALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~-----~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
+...|+.|+||+|+.+.. .+..++.+.+........ .+.+|+++|++|.+ +++|++++++ +..
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~------~~~vP~ll~~----~~~ 73 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG------LPRTPRLLHW----DGR 73 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC------CCCCCEEEEE----cCE
Confidence 567899999999998854 677788888876554333 57889999999953 5788888886 456
Q ss_pred EEEEecccch-hHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccC-CCCCEEEeecCCCCeEEEeecCCccc
Q 002401 188 CICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDL-KPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 188 ~LVmEy~~Gs-L~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDL-KPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
|+||||+.|. |.+.+. .. ...++.|++.+|.+||++||||||| ||+|||++ .++.++|+|||+|..
T Consensus 74 ~lvmeyI~G~~L~~~~~--------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPP--------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhhhh--------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCcee
Confidence 9999999875 433211 11 2357889999999999999999999 79999994 567899999999974
Q ss_pred ccccce----------------eeccCCCCCCcchhcCC-CCC-chhHHHHHHHHHHHHHhCCCCCCCCC
Q 002401 266 EDRTVY----------------SYIQSRYYRSPEVLLGY-QYT-TAIDMWSFGCIVAELFLGLPLFPGAS 317 (927)
Q Consensus 266 ~~~~~~----------------~~~gT~~Y~APEvl~~~-~ys-~ksDIWSLG~ILyELlTG~~PF~g~s 317 (927)
...... ....++.|++|+...-. ..+ ...+.++.|+.+|.++|+..++.++.
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 332211 01235667777765443 344 56788899999999999998886654
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.3e-17 Score=175.33 Aligned_cols=140 Identities=19% Similarity=0.158 Sum_probs=109.0
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc---e-eE
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR---H-LC 188 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~---~-l~ 188 (927)
.+.||+|+|+.||. +..+... +||++... ....+.+.+|+++++.|.+ ...+|+||++++++++++. . +.
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~--~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSR--RLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhc--cCCCCcccceeeEEEEeCCCCeEEEE
Confidence 46899999999995 6666665 68988753 2345678999999999965 2346899999999999873 4 34
Q ss_pred EEEeccc---chhHHHHHhhccCCCCHHHHHHHHHHHHHHH-hhhccCCeeeccCCCCCEEEeecC-CCCeEEEeecCCc
Q 002401 189 ICFELLD---SNLYELIKINHFRGLSLSIVQLFSKQILRGL-SLLKDAGIIHCDLKPENILLCTSV-KPAEIKIIDFGSA 263 (927)
Q Consensus 189 LVmEy~~---GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL-~yLHs~gIVHrDLKPeNILL~~~~-~~g~IKL~DFGlA 263 (927)
+||||++ ++|.++++.. .+++. ..++.|++.++ +|||+++||||||||+|||++... ....++|+||+.+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 8899954 6999999653 36655 35688888888 999999999999999999997433 3458999995433
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=7.8e-17 Score=172.52 Aligned_cols=144 Identities=19% Similarity=0.145 Sum_probs=110.2
Q ss_pred CceEEEEEeccCCceeEEEee-ccCCCeEEEEEEEeCChh-------------------------hHHHHHHHHHHHHHH
Q 002401 109 RRYIVKDLLGHGTFGQVAKCW-DAEMNSFVAVKIIKNQPA-------------------------YYQQALVEVSILTTL 162 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~-d~~tg~~VAIKiik~~~~-------------------------~~~~~~~Ei~iL~~L 162 (927)
.-|++.+.||+|+||.||+|. +..+++.||||+++.... ....+.+|+++++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999998 778899999999974321 112356799999999
Q ss_pred hhhcCCCCCCceeEEEEEEeecceeEEEEecccch-hHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCC-eeeccCC
Q 002401 163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG-IIHCDLK 240 (927)
Q Consensus 163 ~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~Gs-L~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~g-IVHrDLK 240 (927)
... ...+.++++. ...+|||||++|. |...+... ..+.+..+..++.||+.+|++||++| |+|||||
T Consensus 108 ~~~-----~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik 176 (237)
T smart00090 108 YEA-----GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLS 176 (237)
T ss_pred Hhc-----CCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence 541 2334455443 2358999999984 44332221 24667778899999999999999999 9999999
Q ss_pred CCCEEEeecCCCCeEEEeecCCccccc
Q 002401 241 PENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 241 PeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|+||+++ .+.++|+|||.+....
T Consensus 177 p~NIli~----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 177 EYNILVH----DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhhEEEE----CCCEEEEEChhhhccC
Confidence 9999995 5789999999986443
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.68 E-value=1.7e-17 Score=174.72 Aligned_cols=200 Identities=19% Similarity=0.192 Sum_probs=154.2
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
....++.+|.+...|..|+++. .+..+++|+++.. ....+.|..|.-.|+.+ .||||+.+++.|....
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrif-------shpnilpvlgacnspp 260 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIF-------SHPNILPVLGACNSPP 260 (448)
T ss_pred hhhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeee-------cCCchhhhhhhccCCC
Confidence 3555667899999999999954 4556778888643 23345666777777777 5999999999999999
Q ss_pred eeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCC--eeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 186 ~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~g--IVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
++++|..||+ |+|+.++.....--++..++.+++.+|++|++|||+.. |.---|....++++.+ -..++-.+|--+
T Consensus 261 nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmided-ltarismad~kf 339 (448)
T KOG0195|consen 261 NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDED-LTARISMADTKF 339 (448)
T ss_pred CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecch-hhhheeccccee
Confidence 9999999998 89999998876555788899999999999999999864 4444688888999532 234455566544
Q ss_pred cccccccceeeccCCCCCCcchhcCCCCC---chhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 002401 263 ACTEDRTVYSYIQSRYYRSPEVLLGYQYT---TAIDMWSFGCIVAELFLGLPLFPGASEFDLL 322 (927)
Q Consensus 263 A~~~~~~~~~~~gT~~Y~APEvl~~~~ys---~ksDIWSLG~ILyELlTG~~PF~g~s~~d~l 322 (927)
+.+... ..-.+.|++||.+...+-+ .++|+|||+++||||.|...||...+..+.-
T Consensus 340 sfqe~g----r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg 398 (448)
T KOG0195|consen 340 SFQEVG----RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG 398 (448)
T ss_pred eeeccc----cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh
Confidence 433222 2336789999999877544 5899999999999999999999877765543
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=5.5e-17 Score=184.76 Aligned_cols=118 Identities=32% Similarity=0.514 Sum_probs=101.8
Q ss_pred ceeEEEEeccc-chhHHHHHhhc-cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCC
Q 002401 185 RHLCICFELLD-SNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (927)
Q Consensus 185 ~~l~LVmEy~~-GsL~dlL~~~~-~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGl 262 (927)
.++||.|++|. .+|.+.|.... ....+....+.++.|+..|++| ++.+|+|+||.||++. .+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhh
Confidence 36899999998 68888887443 4457888899999999999999 9999999999999995 556899999999
Q ss_pred cccccc---------cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh
Q 002401 263 ACTEDR---------TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL 308 (927)
Q Consensus 263 A~~~~~---------~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT 308 (927)
...... .....+||.+||+||.|.+..|+.|+||||||+||+||+.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 864332 3455689999999999999999999999999999999997
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=1e-15 Score=158.78 Aligned_cols=132 Identities=26% Similarity=0.292 Sum_probs=105.5
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh---------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
+.||+|++|.||+|.. .+..|+||+..... .....+.+|++++..+. +++|+....++....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-------~~~i~~p~~~~~~~~ 72 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-------KAGVNVPAVYFVDPE 72 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-------HCCCCCCeEEEEeCC
Confidence 5799999999999976 66779999865321 11235678999999885 456666666666777
Q ss_pred eeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
..+|||||++| +|.+++.... . .+..++.+|+.+|.+||+.+|+|+||+|.|||++ .+.++|+|||++.
T Consensus 73 ~~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~ 142 (211)
T PRK14879 73 NFIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAE 142 (211)
T ss_pred CCEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCccc
Confidence 88999999986 7777765432 2 7889999999999999999999999999999995 5789999999986
Q ss_pred c
Q 002401 265 T 265 (927)
Q Consensus 265 ~ 265 (927)
.
T Consensus 143 ~ 143 (211)
T PRK14879 143 F 143 (211)
T ss_pred C
Confidence 5
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.60 E-value=6.2e-15 Score=151.76 Aligned_cols=128 Identities=21% Similarity=0.238 Sum_probs=97.6
Q ss_pred EeccCCceeEEEeeccCCCeEEEEEEEeCCh---------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~---------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
.||+|+||.||++. .++..|++|+..... ....++.+|+++++.+.+ ++|....-++.....
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-------~~i~~p~~~~~~~~~ 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARK-------AGVNTPVVYDVDPDN 71 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHH-------CCCCCCEEEEEECCC
Confidence 38999999999997 456789999865321 112456789999999954 333333333445667
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+|||||++| +|.+++.... ..++.+|+.+|.+||+.+|+|+||||+||+++ .+.++|+|||++..
T Consensus 72 ~~lv~e~~~g~~l~~~~~~~~---------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~ 138 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEEGN---------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKY 138 (199)
T ss_pred CEEEEEEECCccHHHHHhhcH---------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcC
Confidence 7999999985 6776654321 17899999999999999999999999999994 57899999999854
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.59 E-value=6.5e-15 Score=152.41 Aligned_cols=137 Identities=23% Similarity=0.269 Sum_probs=102.9
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh-----------------------hHHHHHHHHHHHHHHhhhc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-----------------------YYQQALVEVSILTTLNKKY 166 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~-----------------------~~~~~~~Ei~iL~~L~~~~ 166 (927)
.|.+.+.||+|+||.||++... +++.||||+++.... .......|+.++..+.+.
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~- 93 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE- 93 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-
Confidence 4788899999999999999875 799999999764320 111356788888888532
Q ss_pred CCCCCCceeEEEEEEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEE
Q 002401 167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENIL 245 (927)
Q Consensus 167 ~~~~HpnIVrl~~~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNIL 245 (927)
...++.+++. ...++||||++| +|.++.. ......++.+|+.+|.+||+.||+|+||||+||+
T Consensus 94 ----~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nil 157 (198)
T cd05144 94 ----GFPVPKPIDW----NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNIL 157 (198)
T ss_pred ----CCCCCceeec----CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEE
Confidence 1134444442 356899999987 4443221 1346778999999999999999999999999999
Q ss_pred EeecCCCCeEEEeecCCccccc
Q 002401 246 LCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 246 L~~~~~~g~IKL~DFGlA~~~~ 267 (927)
++ .++.++|+|||.+....
T Consensus 158 l~---~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VD---DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred Ec---CCCcEEEEECCccccCC
Confidence 94 57899999999995543
No 429
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.1e-14 Score=148.22 Aligned_cols=136 Identities=25% Similarity=0.273 Sum_probs=97.2
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhH---HH----------------------HHHHHHHHHHHhhhcCC
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY---QQ----------------------ALVEVSILTTLNKKYDR 168 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~---~~----------------------~~~Ei~iL~~L~~~~~~ 168 (927)
.+.||+|+||+||+|.+. +++.||||+++...... .. ...|...+..+...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--- 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA--- 77 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc---
Confidence 467999999999999887 78899999987532111 11 13466666666432
Q ss_pred CCCCceeEEEEEEeecceeEEEEecccc-hhH-HHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEE
Q 002401 169 EDKHHIVRIYEYFVCQRHLCICFELLDS-NLY-ELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENIL 245 (927)
Q Consensus 169 ~~HpnIVrl~~~f~~~~~l~LVmEy~~G-sL~-dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNIL 245 (927)
+-.+.+++.+ ...+|||||+.+ .+. ..+.... . ...++.++.+++.+|.+||. .+|+|+||||+||+
T Consensus 78 --~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nil 147 (187)
T cd05119 78 --GVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNIL 147 (187)
T ss_pred --CCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEE
Confidence 2234555543 246999999987 211 1121111 1 16688999999999999999 99999999999999
Q ss_pred EeecCCCCeEEEeecCCccccc
Q 002401 246 LCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 246 L~~~~~~g~IKL~DFGlA~~~~ 267 (927)
++ ++.++|+|||.+....
T Consensus 148 i~----~~~~~liDfg~a~~~~ 165 (187)
T cd05119 148 VD----DGKVYIIDVPQAVEID 165 (187)
T ss_pred EE----CCcEEEEECccccccc
Confidence 95 6789999999996443
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.57 E-value=1.2e-14 Score=172.80 Aligned_cols=134 Identities=21% Similarity=0.288 Sum_probs=104.6
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEE--eC--C-----hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKII--KN--Q-----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKii--k~--~-----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
..|...++||+|+||+||++...... +++|+. +. . ....+.+.+|+++++.++ |++|+..+.
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-------~~~i~~p~~ 403 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-------RAGVPTPVI 403 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-------ccCCCeeEE
Confidence 45677899999999999998764443 333332 11 1 112345778999999994 678887777
Q ss_pred EEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEe
Q 002401 180 YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII 258 (927)
Q Consensus 180 ~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~ 258 (927)
++......+|||||++| +|.+++. ....++.||+++|.+||+.+|+||||||+|||+ .++.++|+
T Consensus 404 ~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~~~~~~li 469 (535)
T PRK09605 404 YDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----RDDRLYLI 469 (535)
T ss_pred EEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----ECCcEEEE
Confidence 77777788999999985 7777664 356789999999999999999999999999999 24689999
Q ss_pred ecCCccc
Q 002401 259 DFGSACT 265 (927)
Q Consensus 259 DFGlA~~ 265 (927)
|||+++.
T Consensus 470 DFGla~~ 476 (535)
T PRK09605 470 DFGLGKY 476 (535)
T ss_pred eCccccc
Confidence 9999865
No 431
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.54 E-value=1.5e-14 Score=167.25 Aligned_cols=143 Identities=22% Similarity=0.331 Sum_probs=120.4
Q ss_pred CCCceeEEEEEEeecceeEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCe-eeccCCCCCEEEe
Q 002401 170 DKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI-IHCDLKPENILLC 247 (927)
Q Consensus 170 ~HpnIVrl~~~f~~~~~l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gI-VHrDLKPeNILL~ 247 (927)
.|.|+.++++.+.+....++|.+||. |+|.|.+.... ..++......++++|+.||+|||..-| .|+.|+..|+++
T Consensus 5 ~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv- 82 (484)
T KOG1023|consen 5 DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV- 82 (484)
T ss_pred chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee-
Confidence 68999999999999999999999998 89999988744 468888999999999999999998766 999999999999
Q ss_pred ecCCCCeEEEeecCCcccccc-----cceeeccCCCCCCcchhcCCC-------CCchhHHHHHHHHHHHHHhCCCCCCC
Q 002401 248 TSVKPAEIKIIDFGSACTEDR-----TVYSYIQSRYYRSPEVLLGYQ-------YTTAIDMWSFGCIVAELFLGLPLFPG 315 (927)
Q Consensus 248 ~~~~~g~IKL~DFGlA~~~~~-----~~~~~~gT~~Y~APEvl~~~~-------ys~ksDIWSLG~ILyELlTG~~PF~g 315 (927)
+....+||+|||+...... .........-|.|||++.... .+.+.||||+|+|++|+++...||..
T Consensus 83 --d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~ 160 (484)
T KOG1023|consen 83 --DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL 160 (484)
T ss_pred --eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence 4778999999999865432 111112345599999998741 46789999999999999999999975
Q ss_pred C
Q 002401 316 A 316 (927)
Q Consensus 316 ~ 316 (927)
.
T Consensus 161 ~ 161 (484)
T KOG1023|consen 161 R 161 (484)
T ss_pred c
Confidence 3
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=6.7e-16 Score=184.97 Aligned_cols=199 Identities=26% Similarity=0.356 Sum_probs=157.9
Q ss_pred CceEEEEEeccCCceeEEEeeccC-CCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAE-MNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~-tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
..|.+.+.||+|+|+.|-++.... ....+|+|.+... .........|+.+-+.+. .|.|++++++.....
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s------~h~n~~~~~~~~~~~ 93 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS------KHSNTVHMIEPSSSP 93 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc------ccccccccCCccCCC
Confidence 578888899999999999987744 3456777777643 233444445666666663 289999999999999
Q ss_pred ceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhc-cCCeeeccCCCCCEEEeecCCCC-eEEEeecC
Q 002401 185 RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK-DAGIIHCDLKPENILLCTSVKPA-EIKIIDFG 261 (927)
Q Consensus 185 ~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLH-s~gIVHrDLKPeNILL~~~~~~g-~IKL~DFG 261 (927)
+..++++|+..| .+.+.+........+...+..++.|+..+|.|+| ..++.|+||||+|.+++ ..+ .+|+.|||
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~---~s~~~l~~~df~ 170 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD---ESGSALKIADFG 170 (601)
T ss_pred cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc---cCCCcccCCCch
Confidence 999999999874 6776663333235788889999999999999999 99999999999999995 445 89999999
Q ss_pred Ccccccc------cceeecc-CCCCCCcchhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 002401 262 SACTEDR------TVYSYIQ-SRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGA 316 (927)
Q Consensus 262 lA~~~~~------~~~~~~g-T~~Y~APEvl~~~~-ys~ksDIWSLG~ILyELlTG~~PF~g~ 316 (927)
+|..... .....+| ++.|+|||...+.. .....|+||+|+++..+++|..|+...
T Consensus 171 ~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 171 LATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred hhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 9964332 2334578 99999999999864 457899999999999999999988543
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.52 E-value=1.1e-13 Score=132.74 Aligned_cols=134 Identities=21% Similarity=0.172 Sum_probs=108.7
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
+++.|+.|.++.||++.+.. ..++||+++.... ...+..|+.+++.+.+. ..++++++.++...+..++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e 73 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK-----GLPVPKVLASGESDGWSYLLME 73 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEE
Confidence 45789999999999998654 6799999876543 45678899999999652 3578888888888889999999
Q ss_pred cccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC---CeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 193 LLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA---GIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 193 y~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~---gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
|+.+.....+ +......++.+++++|++||.. +++|+||+|+||+++ ..+.++|+||+.+..
T Consensus 74 ~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~ 138 (155)
T cd05120 74 WIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGY 138 (155)
T ss_pred ecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccC
Confidence 9986432211 4556777899999999999985 799999999999995 468899999998853
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.48 E-value=3.1e-13 Score=144.99 Aligned_cols=134 Identities=21% Similarity=0.212 Sum_probs=98.0
Q ss_pred EEec-cCCceeEEEeeccCCCeEEEEEEEeCCh--------------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE
Q 002401 115 DLLG-HGTFGQVAKCWDAEMNSFVAVKIIKNQP--------------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYE 179 (927)
Q Consensus 115 ~~LG-~GsfG~Vyka~d~~tg~~VAIKiik~~~--------------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~ 179 (927)
..|| .|+.|+||++... +..+|||.++... .....+.+|++++..|.+. +..+++.++
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-----gi~vP~pl~ 109 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-----GLPVPRPIA 109 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-----CCCCceeEe
Confidence 3566 7777888887553 6778999885311 1234577899999999653 333577777
Q ss_pred EEeecc----eeEEEEecccc--hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCC
Q 002401 180 YFVCQR----HLCICFELLDS--NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 180 ~f~~~~----~l~LVmEy~~G--sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g 253 (927)
+...+. ..+||||+++| +|.+++... .+++.. +.||+.+|.+||++||+|+||||+|||++ .++
T Consensus 110 ~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~---~~~ 179 (239)
T PRK01723 110 ARVVRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD---PDG 179 (239)
T ss_pred eeeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc---CCC
Confidence 654432 23699999985 677776542 355543 57899999999999999999999999995 456
Q ss_pred eEEEeecCCccc
Q 002401 254 EIKIIDFGSACT 265 (927)
Q Consensus 254 ~IKL~DFGlA~~ 265 (927)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 899999998854
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=8.9e-13 Score=153.03 Aligned_cols=195 Identities=26% Similarity=0.250 Sum_probs=156.1
Q ss_pred CceEEEEEecc--CCceeEEEeec--cCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE
Q 002401 109 RRYIVKDLLGH--GTFGQVAKCWD--AEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF 181 (927)
Q Consensus 109 ~rY~i~~~LG~--GsfG~Vyka~d--~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f 181 (927)
..+.+.+.+|. |.+|.||.+.. ..+...+|+|.-+.. ......-.+|+...+.+. .|+++++.+..+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~------~~~~~v~~~~~~ 187 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKID------SHENPVRDSPAW 187 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccC------ccccccccCccc
Confidence 57788899999 99999999988 888999999984421 112223345555555553 589999999999
Q ss_pred eecceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHH----HHhhhccCCeeeccCCCCCEEEeecCCC-CeEE
Q 002401 182 VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILR----GLSLLKDAGIIHCDLKPENILLCTSVKP-AEIK 256 (927)
Q Consensus 182 ~~~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~----aL~yLHs~gIVHrDLKPeNILL~~~~~~-g~IK 256 (927)
+..+.+++-+|+|+..|..+..... .-++...++..+.++.. ||.++|..+|+|-|+||+||++. .+ ..++
T Consensus 188 e~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~---~~~~s~~ 263 (524)
T KOG0601|consen 188 EGSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT---SDWTSCK 263 (524)
T ss_pred ccCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc---cccceee
Confidence 9999999999999988887765543 34889999999999999 99999999999999999999995 44 7899
Q ss_pred EeecCCcccccccc--------eeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 257 IIDFGSACTEDRTV--------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 257 L~DFGlA~~~~~~~--------~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
++|||+........ ....+...|++||++.+ -++.+.||++||.++.+..++..++.
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhccccc
Confidence 99999986543321 11245667999999865 78899999999999999998866653
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.25 E-value=1.5e-12 Score=157.59 Aligned_cols=262 Identities=18% Similarity=0.272 Sum_probs=191.1
Q ss_pred cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 107 ~~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
..+.+.+.+-+-.|.++.++.+.-..++...++|+.+........-.+++.--+.+ .....+|.+++..-.|.....
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~---~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNI---LITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCc---cccCCCCceecccCCCCCCCC
Confidence 34678888899999999999998888888888888765432222111111111111 111234666666555667788
Q ss_pred eEEEEeccc-chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 187 l~LVmEy~~-GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
.+||++|+. ++|...+.... ..+.+-++.++..+..++++||...++|+|++|.|+|. ...+..++.||+....
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSK 953 (1205)
T ss_pred cchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCccccccc
Confidence 999999997 47777666543 57788889999999999999999999999999999999 4678899999984311
Q ss_pred cc----------------------------------ccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCC
Q 002401 266 ED----------------------------------RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLP 311 (927)
Q Consensus 266 ~~----------------------------------~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~ 311 (927)
.. .......+|+.|.+||.+.+......+|+|++|++++|.++|.+
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 00 00123467889999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcCCcc
Q 002401 312 LFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE 391 (927)
Q Consensus 312 PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~~~~ 391 (927)
||........++.|....-
T Consensus 1034 p~na~tpq~~f~ni~~~~~------------------------------------------------------------- 1052 (1205)
T KOG0606|consen 1034 PFNAETPQQIFENILNRDI------------------------------------------------------------- 1052 (1205)
T ss_pred CCCCcchhhhhhccccCCC-------------------------------------------------------------
Confidence 9988776665544332111
Q ss_pred cccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHH---HHHhCCCcCCCCCC
Q 002401 392 YFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPF---QASRHPFVTGEPFT 459 (927)
Q Consensus 392 ~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~---EaLqHPwf~~~~~~ 459 (927)
|+.. -....+..+.+++.++|..+|.+|..+. ++-.|+||+...+.
T Consensus 1053 --------------~~p~--------g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1053 --------------PWPE--------GPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred --------------CCCC--------CccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcc
Confidence 0000 0012345788999999999999999998 99999999987653
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=5e-11 Score=124.32 Aligned_cols=137 Identities=16% Similarity=0.177 Sum_probs=101.5
Q ss_pred EEeccCCceeEEEeeccC------CCeEEEEEEEeCC--------------h---------hhHH----HHHHHHHHHHH
Q 002401 115 DLLGHGTFGQVAKCWDAE------MNSFVAVKIIKNQ--------------P---------AYYQ----QALVEVSILTT 161 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~------tg~~VAIKiik~~--------------~---------~~~~----~~~~Ei~iL~~ 161 (927)
.+||.|--+.||.|.... .+..+|||+++.. . .... .+.+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997653 3578999998621 0 0011 23479999999
Q ss_pred HhhhcCCCCCCceeEEEEEEeecceeEEEEecccch-hH-HHHHhhccCCCCHHHHHHHHHHHHHHHhhh-ccCCeeecc
Q 002401 162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSN-LY-ELIKINHFRGLSLSIVQLFSKQILRGLSLL-KDAGIIHCD 238 (927)
Q Consensus 162 L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~Gs-L~-dlL~~~~~~~L~e~~i~~i~~QIl~aL~yL-Hs~gIVHrD 238 (927)
+... .-++.+++++ ..-+|||||++++ +. ..++.. .++++.+..++.+++.+|..| |+.||||+|
T Consensus 83 l~~~-----Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGD 150 (197)
T cd05146 83 MQKA-----GIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHAD 150 (197)
T ss_pred HHHc-----CCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 9764 3467777764 4678999999863 21 122221 356667788899999999999 899999999
Q ss_pred CCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 239 LKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 239 LKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|++.|||+. ++.++|+|||.+...+
T Consensus 151 Ls~~NIL~~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWH----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEE----CCcEEEEECCCceeCC
Confidence 999999994 3679999999986544
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.22 E-value=4.8e-11 Score=138.82 Aligned_cols=141 Identities=21% Similarity=0.308 Sum_probs=93.9
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHH-------------------------------------------H
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQ-------------------------------------------Q 151 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~-------------------------------------------~ 151 (927)
+.||.|++|+||+|+.. +|+.||||+.+..- .+ .
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i--~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 199 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGI--EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD 199 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCc--HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence 57999999999999764 68999999986321 11 1
Q ss_pred HHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHH-HHhhh
Q 002401 152 ALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILR-GLSLL 229 (927)
Q Consensus 152 ~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~-aL~yL 229 (927)
+.+|.+.+.+++..+.....-.|.+++. ......+|||||++| +|.++..... ..+. ...++.+++. .+..+
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQV 273 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHH
Confidence 3335555555544332211222333332 223457999999986 6666554322 1222 3455666665 47888
Q ss_pred ccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccccc
Q 002401 230 KDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 230 Hs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~ 267 (927)
|..|++|+|+||.||++. .++.++|+|||++....
T Consensus 274 ~~~g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 274 LRDGFFHADLHPGNIFVL---KDGKIIALDFGIVGRLS 308 (437)
T ss_pred HhCCceeCCCCcccEEEC---CCCcEEEEeCCCeeECC
Confidence 999999999999999994 56889999999986544
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=4.4e-11 Score=119.39 Aligned_cols=127 Identities=19% Similarity=0.097 Sum_probs=94.0
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEec
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL 193 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy 193 (927)
++.|+.|.++.||++... ++.|++|+............+|+++++.+... ..+.+++.+.. ...++|||+
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~------~~~P~~~~~~~--~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEA------GIGPKLYYFDP--ETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHh------CCCCceEEEeC--CCCeEEEEe
Confidence 467899999999999754 77899999876542233457899999998643 22455665543 345899999
Q ss_pred ccch-hHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCe-----eeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 194 LDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGI-----IHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 194 ~~Gs-L~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gI-----VHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
++|. +.+. ......++.+|+++|+.||..++ +|+|++|.||+++ .+.++|+||+.+.
T Consensus 73 i~G~~l~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE----------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc----------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEeccccc
Confidence 9973 3221 01123467899999999999885 9999999999995 4579999999874
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.21 E-value=1.2e-11 Score=146.26 Aligned_cols=149 Identities=15% Similarity=0.271 Sum_probs=94.9
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-----------------------------------hhHHH--
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-----------------------------------AYYQQ-- 151 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-----------------------------------~~~~~-- 151 (927)
..|.. +.||.|++|+||+|+.+.+|+.||||+++..- ...+.
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35665 78999999999999998889999999997431 01111
Q ss_pred ----HHHHHHHHHHHhhhcCCCCCCceeEEEEEEe-ecceeEEEEecccc-hhHHHHHhhccC----CCCHHHHHHHHHH
Q 002401 152 ----ALVEVSILTTLNKKYDREDKHHIVRIYEYFV-CQRHLCICFELLDS-NLYELIKINHFR----GLSLSIVQLFSKQ 221 (927)
Q Consensus 152 ----~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~-~~~~l~LVmEy~~G-sL~dlL~~~~~~----~L~e~~i~~i~~Q 221 (927)
+.+|+..+.+++..+. +...+.+-.++. .....+|||||++| .+.++......+ .+.+..+..++.|
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~---~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 199 DELDLMREAANASQLRRNFE---DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred HhhCHHHHHHHHHHHHHHcc---CCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 2334444444443322 222233333332 23467899999996 565532211111 2455556666666
Q ss_pred HHHHHhhhccCCeeeccCCCCCEEEeec-CCCCeEEEeecCCcccccc
Q 002401 222 ILRGLSLLKDAGIIHCDLKPENILLCTS-VKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 222 Il~aL~yLHs~gIVHrDLKPeNILL~~~-~~~g~IKL~DFGlA~~~~~ 268 (927)
|+ ..|++|+|+||.||+++.+ ...++++++|||++...+.
T Consensus 276 if-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 VF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 65 4899999999999999632 1234999999999865543
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.10 E-value=4.1e-10 Score=132.33 Aligned_cols=165 Identities=23% Similarity=0.266 Sum_probs=126.0
Q ss_pred EeeccCCCeEEEEEEEeCChh-hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecccchhHHHHHhh
Q 002401 127 KCWDAEMNSFVAVKIIKNQPA-YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKIN 205 (927)
Q Consensus 127 ka~d~~tg~~VAIKiik~~~~-~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL~dlL~~~ 205 (927)
.+..+.++.+|.|++++.... ....+.+-++.|+.| .||||+++++.++.++.+|||+|.+.. |..+++.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-------RHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-------RHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKE- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhc-------cCchhhhhhhhhcccCceEEEeecccc-HHHHHHH-
Confidence 455677888999999986543 344566777788888 489999999999999999999999862 3333333
Q ss_pred ccCCCCHHHHHHHHHHHHHHHhhhc-cCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccc---eeeccCCCCCC
Q 002401 206 HFRGLSLSIVQLFSKQILRGLSLLK-DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTV---YSYIQSRYYRS 281 (927)
Q Consensus 206 ~~~~L~e~~i~~i~~QIl~aL~yLH-s~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~---~~~~gT~~Y~A 281 (927)
+....+...+.||+.||.||| +++++|++|.-+.|+| ...|..||.+|.+++...... ....---.|..
T Consensus 101 ----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~ 173 (690)
T KOG1243|consen 101 ----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAPAKSLYLIESFDD 173 (690)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCcccccchhhhcccC
Confidence 336778889999999999997 6799999999999999 477999999999886544332 11112223666
Q ss_pred cchhcCCCCCchhHHHHHHHHHHHHHhC
Q 002401 282 PEVLLGYQYTTAIDMWSFGCIVAELFLG 309 (927)
Q Consensus 282 PEvl~~~~ys~ksDIWSLG~ILyELlTG 309 (927)
|+.+.... ...|.|-|||+++|++.|
T Consensus 174 P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 174 PEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 76654322 457999999999999999
No 442
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=5.3e-11 Score=138.42 Aligned_cols=197 Identities=23% Similarity=0.220 Sum_probs=147.0
Q ss_pred CCceEEEEEeccCCceeEEEeecc-CCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDA-EMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~-~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
..+|..+..||.+.|+.|+.+... .++..|++|.+.+.. ......+.|+.+...+. .|.++++.+..+..
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~------~~~~~~g~~~~W~~ 337 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG------SHLPSVGKNSSWSQ 337 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh------cccccCCCCCCccc
Confidence 368889999999999999998654 678889999887542 22223456777777664 47889998888888
Q ss_pred cceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 184 QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 184 ~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.+..||=.|||.+....+-. .-...+.+..++++..|++.+|.++|+..++|+|+||+||++..+ .+..++.||+++
T Consensus 338 ~r~~~ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 338 LRQGYIPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--GFFSKLGDFGCW 414 (524)
T ss_pred cccccCchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--hhhhhccccccc
Confidence 88888999999753322222 112348888999999999999999999999999999999999632 277899999998
Q ss_pred ccccccceeecc-CCCC-CCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002401 264 CTEDRTVYSYIQ-SRYY-RSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313 (927)
Q Consensus 264 ~~~~~~~~~~~g-T~~Y-~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF 313 (927)
....-....... +..| .++++.....+..+.|+++||.-+.|.+++.+.-
T Consensus 415 t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls 466 (524)
T KOG0601|consen 415 TRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS 466 (524)
T ss_pred cccceecccccccccccccchhhccccccccccccccccccccccccCcccC
Confidence 642222222222 3444 3555555668889999999999999999986543
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.07 E-value=2.6e-10 Score=124.03 Aligned_cols=138 Identities=21% Similarity=0.271 Sum_probs=104.6
Q ss_pred CCCceeEEEEEEeecc-----eeEEEEeccc-chhHHHHHhhcc--CCCCHHHHHHHHHHHHHHHhhhccCC--eeeccC
Q 002401 170 DKHHIVRIYEYFVCQR-----HLCICFELLD-SNLYELIKINHF--RGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDL 239 (927)
Q Consensus 170 ~HpnIVrl~~~f~~~~-----~l~LVmEy~~-GsL~dlL~~~~~--~~L~e~~i~~i~~QIl~aL~yLHs~g--IVHrDL 239 (927)
.|-|||+++.++.+.+ ...++.|||. |.|..+|++..+ ..+.+...++|+-||+.||.|||+.. |+|+++
T Consensus 125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgnl 204 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNL 204 (458)
T ss_pred HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCc
Confidence 4779999999887654 5789999998 788888876542 35888999999999999999999874 999999
Q ss_pred CCCCEEEeecCCCCeEEEeecCCcccc-------cccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002401 240 KPENILLCTSVKPAEIKIIDFGSACTE-------DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGL 310 (927)
Q Consensus 240 KPeNILL~~~~~~g~IKL~DFGlA~~~-------~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~ 310 (927)
..+-|++. .++.|||.---..... ........+-++|.|||.=.....+.++|||++|+...||..+.
T Consensus 205 Tc~tifiq---~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 205 TCDTIFIQ---HNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred chhheeec---CCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 99999995 5577776432111100 01111223457799999876667788999999999999887664
No 444
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.07 E-value=2.6e-09 Score=108.96 Aligned_cols=144 Identities=20% Similarity=0.174 Sum_probs=109.6
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeC---------ChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---------QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~---------~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~ 183 (927)
.+..|-+|+-+.|+++ ...|+.++||.-.. ..-...+.++|+++|.++... .|.-..-+|.+
T Consensus 11 ~l~likQGAEArv~~~--~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-------GI~~P~l~~~D 81 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRG--SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-------GIPAPRLIFID 81 (229)
T ss_pred cceeeeccceeeEeee--ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCceEEEEe
Confidence 5678889999999998 45677777775321 123345678899999999654 23333334556
Q ss_pred cceeEEEEecccc--hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 184 QRHLCICFELLDS--NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 184 ~~~l~LVmEy~~G--sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
...-+|+|||++| ++.+++...-...........++++|-+.|.-||..+|||+||..+||++..+.....+.|+|||
T Consensus 82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfg 161 (229)
T KOG3087|consen 82 TYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFG 161 (229)
T ss_pred cCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeec
Confidence 6677899999998 88888877654444444557899999999999999999999999999999866666667999999
Q ss_pred Cccc
Q 002401 262 SACT 265 (927)
Q Consensus 262 lA~~ 265 (927)
++..
T Consensus 162 ls~~ 165 (229)
T KOG3087|consen 162 LSSV 165 (229)
T ss_pred chhc
Confidence 9843
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.95 E-value=3.5e-09 Score=109.79 Aligned_cols=141 Identities=14% Similarity=0.152 Sum_probs=99.8
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec---ceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---RHLCI 189 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~---~~l~L 189 (927)
+.|+.|..+.||++.... ++.+++|+...... .......|+++++.+... +..+.+++.+.... +..++
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~ 77 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFY 77 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCC-----CCCCCCEEEECCCCCccCCceE
Confidence 578999999999997643 57899999875432 345778999999999652 33566677766553 36789
Q ss_pred EEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-------------------------------------
Q 002401 190 CFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD------------------------------------- 231 (927)
Q Consensus 190 VmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs------------------------------------- 231 (927)
|||+++| .+.+.+.. ..+++.....++.+|+++|..||+
T Consensus 78 v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 78 VMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred EEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 9999986 34332211 135566666666666666666663
Q ss_pred -------------------CCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 232 -------------------AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 232 -------------------~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
..+||+|+++.||+++.+ ..+.+.|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~ 206 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence 347999999999999632 146789999998754
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=1.3e-08 Score=104.38 Aligned_cols=129 Identities=22% Similarity=0.243 Sum_probs=92.9
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC---------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
..|.+|+-+.||.+.. -+..+++|.=..+ .-......+|.++|.++... --++..+++ .+.+
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-----GV~~P~v~d--vD~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-----GVPVPIVYD--VDPD 72 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCeEEE--EcCC
Confidence 3578899999998843 3334566653211 23345678899999999754 234444544 4556
Q ss_pred eeEEEEecccch-hHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 186 HLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 186 ~l~LVmEy~~Gs-L~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
...|+|||++|. |.+++... ...+++.|=.-+.-||..||||+||.+.||++. .+.+.++|||++.
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~ 139 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGE 139 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCccc
Confidence 678999999985 44566544 245677888888899999999999999999994 3459999999985
Q ss_pred c
Q 002401 265 T 265 (927)
Q Consensus 265 ~ 265 (927)
.
T Consensus 140 ~ 140 (204)
T COG3642 140 F 140 (204)
T ss_pred c
Confidence 3
No 447
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=4.3e-08 Score=107.27 Aligned_cols=127 Identities=16% Similarity=0.072 Sum_probs=91.6
Q ss_pred CCeEEEEEEEeCCh--hhHH----------HHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee-----cceeEEEEeccc
Q 002401 133 MNSFVAVKIIKNQP--AYYQ----------QALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-----QRHLCICFELLD 195 (927)
Q Consensus 133 tg~~VAIKiik~~~--~~~~----------~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~-----~~~l~LVmEy~~ 195 (927)
.|+.|.||...... ...+ .+.+|...+..|... .-.++.++.+++. ...-+||||+++
T Consensus 44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~ 118 (268)
T PRK15123 44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLA 118 (268)
T ss_pred CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCC
Confidence 45677888664322 0111 377899999998654 2234444444433 235789999999
Q ss_pred c--hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeec----CCCCeEEEeecCCcc
Q 002401 196 S--NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS----VKPAEIKIIDFGSAC 264 (927)
Q Consensus 196 G--sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~----~~~g~IKL~DFGlA~ 264 (927)
+ +|.+++...............++.+|+..+.-||..||+|+||++.|||+..+ .....+.|+||+.+.
T Consensus 119 ~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 119 PTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred CCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 7 68888764333446677888999999999999999999999999999999631 235789999999874
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.80 E-value=1.8e-08 Score=104.69 Aligned_cols=127 Identities=28% Similarity=0.299 Sum_probs=81.3
Q ss_pred eEEEeeccCCCeEEEEEEEeCC---------------------------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeE
Q 002401 124 QVAKCWDAEMNSFVAVKIIKNQ---------------------------PAYYQQALVEVSILTTLNKKYDREDKHHIVR 176 (927)
Q Consensus 124 ~Vyka~d~~tg~~VAIKiik~~---------------------------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVr 176 (927)
.||.|.. ..++.||||+.+.. ........+|.+.|.++... .-++.+
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~-----Gv~vP~ 74 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA-----GVPVPK 74 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT-----T-SS--
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC-----CccCCc
Confidence 4788865 45678999998521 01234567799999999653 235677
Q ss_pred EEEEEeecceeEEEEeccc--chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhh-hccCCeeeccCCCCCEEEeecCCCC
Q 002401 177 IYEYFVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLFSKQILRGLSL-LKDAGIIHCDLKPENILLCTSVKPA 253 (927)
Q Consensus 177 l~~~f~~~~~l~LVmEy~~--GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~y-LHs~gIVHrDLKPeNILL~~~~~~g 253 (927)
++++- .-+|||||++ |.....+.... ++.+....++.+++..+.. +|+.||||+||.+.|||+. + +
T Consensus 75 p~~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~---~-~ 143 (188)
T PF01163_consen 75 PYDYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD---D-G 143 (188)
T ss_dssp EEEEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE---T-T
T ss_pred EEEEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee---c-c
Confidence 76542 4579999999 64333333332 2245567788888885555 5799999999999999995 2 3
Q ss_pred eEEEeecCCccccc
Q 002401 254 EIKIIDFGSACTED 267 (927)
Q Consensus 254 ~IKL~DFGlA~~~~ 267 (927)
.+.|+|||.+....
T Consensus 144 ~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 144 KVYIIDFGQAVDSS 157 (188)
T ss_dssp CEEE--GTTEEETT
T ss_pred eEEEEecCcceecC
Confidence 89999999886543
No 449
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.70 E-value=2.7e-07 Score=106.18 Aligned_cols=165 Identities=16% Similarity=0.151 Sum_probs=121.9
Q ss_pred ceeEEEeeccCCCeEEEEEEEeCChh-hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec----ceeEEEEeccc-
Q 002401 122 FGQVAKCWDAEMNSFVAVKIIKNQPA-YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ----RHLCICFELLD- 195 (927)
Q Consensus 122 fG~Vyka~d~~tg~~VAIKiik~~~~-~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~----~~l~LVmEy~~- 195 (927)
-.+.|+|....+|..|++|.+.-++. .......-+++++++ .|.|||++.++|... ..++||++|++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-------~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-------CHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh-------ccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 35789999999999999999943221 111222345666776 589999999999843 46999999998
Q ss_pred -chhHHHHHhhc-------------cCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecC
Q 002401 196 -SNLYELIKINH-------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (927)
Q Consensus 196 -GsL~dlL~~~~-------------~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFG 261 (927)
++|+++..... ..+.+|+.+|.++.||..||.++|+.|+.-+-|.+.+||++ .+.+|+|...|
T Consensus 362 s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---G~~RIriS~C~ 438 (655)
T KOG3741|consen 362 SPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---GKMRIRISGCG 438 (655)
T ss_pred CchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---CcceEEEeccc
Confidence 48888764332 13478999999999999999999999999999999999995 34478887666
Q ss_pred CcccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCC
Q 002401 262 SACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGL 310 (927)
Q Consensus 262 lA~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~ 310 (927)
.......... |.+. --.+-|.=.||.++..|.||.
T Consensus 439 i~Dvl~~d~~-----------~~le---~~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 439 IMDVLQEDPT-----------EPLE---SQQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred ceeeecCCCC-----------cchh---HHhhhhHHHHHHHHHHHhhcc
Confidence 5433222210 1121 124678899999999999985
No 450
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.59 E-value=1.3e-08 Score=120.36 Aligned_cols=93 Identities=23% Similarity=0.438 Sum_probs=73.7
Q ss_pred HHHHHHhhhcc-CCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccce------------eeccCCCCCCcchhcC
Q 002401 221 QILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVY------------SYIQSRYYRSPEVLLG 287 (927)
Q Consensus 221 QIl~aL~yLHs-~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~------------~~~gT~~Y~APEvl~~ 287 (927)
+++.||.|+|. .++||++|.|++|.+ +..+..||+.|+++........ .......|.|||++..
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34499999995 599999999999999 4778999999999854332111 1123456999999999
Q ss_pred CCCCchhHHHHHHHHHHHHH-hCCCCCCCC
Q 002401 288 YQYTTAIDMWSFGCIVAELF-LGLPLFPGA 316 (927)
Q Consensus 288 ~~ys~ksDIWSLG~ILyELl-TG~~PF~g~ 316 (927)
...+.++|++||||++|.+. .|+..|...
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~ 213 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAAN 213 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhcc
Confidence 88999999999999999999 566666443
No 451
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.55 E-value=4.2e-07 Score=95.43 Aligned_cols=109 Identities=24% Similarity=0.220 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc----eeEEEEecccc--hhHHHHHhhccCCCCHHHHHHHHHHHH
Q 002401 150 QQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR----HLCICFELLDS--NLYELIKINHFRGLSLSIVQLFSKQIL 223 (927)
Q Consensus 150 ~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~----~l~LVmEy~~G--sL~dlL~~~~~~~L~e~~i~~i~~QIl 223 (927)
..+.+|...+..|... .-.+++.+.+.+... ..+||+|++++ +|.+++..... ++......++.+|+
T Consensus 56 ~ra~~E~~~~~~L~~~-----Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~ 128 (206)
T PF06293_consen 56 SRAKREWRNLQRLREA-----GIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALA 128 (206)
T ss_pred hHHHHHHHHHHHHHHc-----CCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHH
Confidence 4677899988888654 233556666655432 45899999986 68888776432 66777889999999
Q ss_pred HHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 224 RGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 224 ~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
..++-||++||+|+|+++.|||+..+.....+.|+||+.+..
T Consensus 129 ~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 129 RLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999999999999999999997554456899999997754
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.39 E-value=3.6e-06 Score=88.84 Aligned_cols=138 Identities=13% Similarity=0.087 Sum_probs=100.7
Q ss_pred ccCCceeEEEeeccCCCeEEEEEEEeCC-------hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-----c
Q 002401 118 GHGTFGQVAKCWDAEMNSFVAVKIIKNQ-------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-----R 185 (927)
Q Consensus 118 G~GsfG~Vyka~d~~tg~~VAIKiik~~-------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-----~ 185 (927)
|.|+.+-|+..... |+.+-+|.-.+. +--...+.+|+..|+.|... +-| +.++. ++... -
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~----GvP-VP~pv-f~~~~k~~~~~ 98 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERA----GVI-VPKIV-FGEAVKIEGEW 98 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHc----CCC-CCccc-eeeeeccCCce
Confidence 45888888887432 224666765421 22346788999999999764 223 55555 33211 2
Q ss_pred eeEEEEeccc--chhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 186 HLCICFELLD--SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 186 ~l~LVmEy~~--GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
.-+||+|-++ .+|.+++........++.....++.+|+..|+-||+.|+.|+|+.+.|||++.. ....|+++||.-+
T Consensus 99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~ 177 (216)
T PRK09902 99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKS 177 (216)
T ss_pred EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhcc
Confidence 4789999888 488888766554567888889999999999999999999999999999999632 2345999999876
Q ss_pred c
Q 002401 264 C 264 (927)
Q Consensus 264 ~ 264 (927)
+
T Consensus 178 r 178 (216)
T PRK09902 178 R 178 (216)
T ss_pred c
Confidence 4
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.30 E-value=2.2e-06 Score=92.73 Aligned_cols=138 Identities=20% Similarity=0.207 Sum_probs=98.9
Q ss_pred eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----------h-------------hhHHHHHHHHHHHHHHhhhcC
Q 002401 111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----------P-------------AYYQQALVEVSILTTLNKKYD 167 (927)
Q Consensus 111 Y~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~----------~-------------~~~~~~~~Ei~iL~~L~~~~~ 167 (927)
+.+..+||.|--+.||.|.+. .+..+|||.-+.. . .....+.+|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-- 169 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-- 169 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc--
Confidence 457789999999999999876 5778999986421 0 1123567899999999432
Q ss_pred CCCCCceeEEEEEEeecceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEe
Q 002401 168 REDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLC 247 (927)
Q Consensus 168 ~~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~ 247 (927)
--.|.+.+++ +..++|||+++|..+--+ .++.+.+..++..|++-+..+-..||||+|+.+-||+++
T Consensus 170 ---G~~VP~P~~~----nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~ 236 (304)
T COG0478 170 ---GVKVPKPIAW----NRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT 236 (304)
T ss_pred ---CCCCCCcccc----ccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe
Confidence 1246665553 567899999998432111 123445566666777776666689999999999999995
Q ss_pred ecCCCCeEEEeecCCccccc
Q 002401 248 TSVKPAEIKIIDFGSACTED 267 (927)
Q Consensus 248 ~~~~~g~IKL~DFGlA~~~~ 267 (927)
+++.+.++||--+...+
T Consensus 237 ---~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 237 ---EDGDIVVIDWPQAVPIS 253 (304)
T ss_pred ---cCCCEEEEeCcccccCC
Confidence 67899999997765433
No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.24 E-value=7.5e-06 Score=87.87 Aligned_cols=137 Identities=22% Similarity=0.221 Sum_probs=96.1
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChhh-------------------------HHHHHHHHHHHHHHhhhcCCC
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY-------------------------YQQALVEVSILTTLNKKYDRE 169 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~-------------------------~~~~~~Ei~iL~~L~~~~~~~ 169 (927)
..|..|--+.||+|.. .++..||||+++..... ......|+.-|+++...
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eA---- 128 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEA---- 128 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc----
Confidence 3677888889999964 56788999999742111 12245577777777654
Q ss_pred CCCceeEEEEEEeecceeEEEEecccchh--HHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc-CCeeeccCCCCCEEE
Q 002401 170 DKHHIVRIYEYFVCQRHLCICFELLDSNL--YELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILL 246 (927)
Q Consensus 170 ~HpnIVrl~~~f~~~~~l~LVmEy~~GsL--~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs-~gIVHrDLKPeNILL 246 (927)
+-.+.+.+.++ .-+|||||++... .-.|+.. .+..+++..+..++++.+.-|-. .++||+||..-|||+
T Consensus 129 -GVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~ 200 (268)
T COG1718 129 -GVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV 200 (268)
T ss_pred -CCCCCCceeec----CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE
Confidence 34455555543 3579999998431 1111111 23444688888999999998876 899999999999999
Q ss_pred eecCCCCeEEEeecCCcccccc
Q 002401 247 CTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 247 ~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
. ++.+.|+||+-|.....
T Consensus 201 ~----~~~p~iID~~QaV~~~h 218 (268)
T COG1718 201 H----DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred E----CCeEEEEECccccccCC
Confidence 3 67899999999865543
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.23 E-value=7.4e-06 Score=92.54 Aligned_cols=190 Identities=12% Similarity=0.190 Sum_probs=126.7
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEE------eec-c
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF------VCQ-R 185 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f------~~~-~ 185 (927)
..+.||+|+-+.+|-.-... ..+.|++..-..-.+. +.+..|. ...+||-+-.-+.+= -.+ .
T Consensus 15 ~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Pppa~~a-----qk~a~la---~~p~~p~~~~rvaWPqa~L~G~~~~~ 83 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPPAAQA-----QKVAELA---ATPDAPLLNYRVAWPQATLHGGRRGK 83 (637)
T ss_pred CCccccCCccceeeecchhh---chhheeecCCCchHHH-----HHHHHhc---cCCCCcchhhhhcccHHHhhCCCccc
Confidence 34679999999999763222 2355887654322211 1122221 123454333211111 111 2
Q ss_pred eeEEEEecccc--hhHHHHHh----hccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEee
Q 002401 186 HLCICFELLDS--NLYELIKI----NHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID 259 (927)
Q Consensus 186 ~l~LVmEy~~G--sL~dlL~~----~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~D 259 (927)
.+-++|..+.| ....++.- ..+....+..+.+..+.|+.+.+.||+.|.+-+|++++|||++ +++.|.|+|
T Consensus 84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVd 160 (637)
T COG4248 84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVD 160 (637)
T ss_pred eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEc
Confidence 36788888875 34444322 2233478889999999999999999999999999999999995 678899988
Q ss_pred cCCccc--ccccceeeccCCCCCCcchhc-----CCCCCchhHHHHHHHHHHHHHhC-CCCCCCC
Q 002401 260 FGSACT--EDRTVYSYIQSRYYRSPEVLL-----GYQYTTAIDMWSFGCIVAELFLG-LPLFPGA 316 (927)
Q Consensus 260 FGlA~~--~~~~~~~~~gT~~Y~APEvl~-----~~~ys~ksDIWSLG~ILyELlTG-~~PF~g~ 316 (927)
-..-.. .+......++...|.+||+-. +..-+...|.|-||+++++|+.| +.||.|.
T Consensus 161 sDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 161 SDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred ccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 654322 233344567899999999875 23456789999999999999986 9999773
No 456
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.16 E-value=4.6e-05 Score=79.11 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=54.4
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee---cceeEEE
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---QRHLCIC 190 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~---~~~l~LV 190 (927)
++.|+.|..+.||++.... ..+++|+.... .....+..|..+++.|... ...+.+++.+... ....+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~-----~~pvP~~~~~~~~~~~~~~~~~~ 73 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEH-----GIPVPRVLAFDTSDEFNGFPYLL 73 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHT-----TSBS--EEEEEEETEETSEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhc-----CCCCceEEeecccccccccceEE
Confidence 4789999999999997655 47899998755 4556778899999999753 1145666664433 3357999
Q ss_pred Eecccc
Q 002401 191 FELLDS 196 (927)
Q Consensus 191 mEy~~G 196 (927)
|++++|
T Consensus 74 ~~~i~g 79 (239)
T PF01636_consen 74 MEYIPG 79 (239)
T ss_dssp EEEESS
T ss_pred EEEecc
Confidence 999986
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.10 E-value=1.4e-05 Score=94.71 Aligned_cols=145 Identities=17% Similarity=0.287 Sum_probs=88.9
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCC-----------------------------------hhhHH------HHH
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------------------------------PAYYQ------QAL 153 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~-----------------------------------~~~~~------~~~ 153 (927)
+.|+.++-|+||+|+.+. |+.||||+.+-. ....+ .+.
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 579999999999997655 999999998411 00011 133
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC
Q 002401 154 VEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA 232 (927)
Q Consensus 154 ~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~ 232 (927)
+|..-+.+++..+.....-.|.+++. +....-+|+|||++| .+.++..... .+++...+.....++. +.-+=..
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~w--e~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~d 284 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYW--EYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeeh--hccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhc
Confidence 45556666655543222222333332 334567999999997 4555432222 3355333222222111 1222238
Q ss_pred CeeeccCCCCCEEEeecCCCCeEEEeecCCcccccc
Q 002401 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 233 gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
|++|+|.+|.||++. .++++.+.|||+....+.
T Consensus 285 gffHaDpHpGNi~v~---~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 GFFHADPHPGNILVR---SDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred CccccCCCccceEEe---cCCcEEEEcCcceecCCH
Confidence 999999999999994 669999999999865443
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.09 E-value=3.6e-05 Score=81.74 Aligned_cols=137 Identities=14% Similarity=0.156 Sum_probs=89.5
Q ss_pred CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHH----------HHHHHHHHHHHhhhcCCCCCCceeEE
Q 002401 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQ----------ALVEVSILTTLNKKYDREDKHHIVRI 177 (927)
Q Consensus 108 ~~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~----------~~~Ei~iL~~L~~~~~~~~HpnIVrl 177 (927)
..+|++++++-......|.+. .-.++.+++|..+......++ ..+++..+..+... +...+..+
T Consensus 30 ~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~----g~~~~~~~ 103 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNE----GFTEPADP 103 (229)
T ss_pred hCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHc----Cccccccc
Confidence 479999999998888888776 445677899998754322221 22344444444322 22233333
Q ss_pred EEEEe-----ecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCC
Q 002401 178 YEYFV-----CQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK 251 (927)
Q Consensus 178 ~~~f~-----~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~ 251 (927)
+-+.+ .....+|||||++| .|.++.. +++ .+...|.++|.-||+.|++|+|++|.|++++
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~---- 169 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS---- 169 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----
Confidence 32222 22456799999998 4444321 222 2445677889999999999999999999995
Q ss_pred CCeEEEeecCCcc
Q 002401 252 PAEIKIIDFGSAC 264 (927)
Q Consensus 252 ~g~IKL~DFGlA~ 264 (927)
++.++++||+..+
T Consensus 170 ~~~i~iID~~~k~ 182 (229)
T PF06176_consen 170 NNGIRIIDTQGKR 182 (229)
T ss_pred CCcEEEEECcccc
Confidence 3559999998653
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.07 E-value=5.2e-05 Score=81.04 Aligned_cols=73 Identities=11% Similarity=0.018 Sum_probs=54.3
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecc
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL 194 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~ 194 (927)
..|++|..+.||+.. +..+++|+..... ......+|.++++.+... .-.+.+++++....+...+|||++
T Consensus 7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~-----glpvP~~~~~~~~~~~~glv~e~i 76 (226)
T TIGR02172 7 TQTGEGGNGESYTHK----TGKWMLKLYNPGF-DKETIKREFDASRKVFSL-----GIPTPHPFDLVEDGGRLGLIYELI 76 (226)
T ss_pred eeecCCCCcceeEec----CCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHc-----CCCCCceEEEEecCCeeeeeeeec
Confidence 578999999999842 3457789887533 334568899999999642 123677788877777889999999
Q ss_pred cch
Q 002401 195 DSN 197 (927)
Q Consensus 195 ~Gs 197 (927)
+|.
T Consensus 77 ~G~ 79 (226)
T TIGR02172 77 VGK 79 (226)
T ss_pred CCc
Confidence 883
No 460
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.06 E-value=2.5e-07 Score=108.61 Aligned_cols=185 Identities=17% Similarity=0.157 Sum_probs=140.8
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCc-eeEEEEEEeeccee
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHH-IVRIYEYFVCQRHL 187 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~Hpn-IVrl~~~f~~~~~l 187 (927)
+.|...+-++++++++++|.+...+...+ .|++... ....-++++|.++ +||| .+..++-+..+...
T Consensus 242 kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~-------n~P~~~v~~~~d~~~E~~~ 309 (829)
T KOG0576|consen 242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKV-------NNPNPVVRYLEDYDGEDYL 309 (829)
T ss_pred cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHc-------cCCCCcccccccCCccccc
Confidence 56666677899999999999888777666 7777654 2334578888888 4788 77777777888899
Q ss_pred EEEEecccch--hHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 188 CICFELLDSN--LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 188 ~LVmEy~~Gs--L~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+++++++.+. ....+.... ..+.+-+...+++.-+++|++||+.-=+|+| ||+.+ .+..|+.||+.+..
T Consensus 310 ~i~~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s----~~~~~~~~~~v~~~ 380 (829)
T KOG0576|consen 310 WIPMRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS----EEEVKLLDFAVPPQ 380 (829)
T ss_pred chhhhhhcCCccccccCChhh-HhhhhhhhhhhhhhhcccccccccccccCcc----ccccc----ccccccccccCCcc
Confidence 9999999853 222111111 1244555667778888999999998888998 88884 46789999999876
Q ss_pred cccc--ceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 002401 266 EDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP 314 (927)
Q Consensus 266 ~~~~--~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF~ 314 (927)
.... .....+++.++|||++....+..+.|.|++++-..+|.-|.+|-.
T Consensus 381 L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 381 LTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 6655 566788999999999999999999999999987667766766653
No 461
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.01 E-value=9.9e-05 Score=77.54 Aligned_cols=134 Identities=23% Similarity=0.310 Sum_probs=99.1
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh-----------------hhHHHHHHHHHHHHHHhhhcCCCCCCceeEE
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-----------------AYYQQALVEVSILTTLNKKYDREDKHHIVRI 177 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~-----------------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl 177 (927)
..||+|+.-.||.--+ .....||+++... ....+..+|+.....+.. .....+.+|.++
T Consensus 7 ~~i~~G~~R~cy~HP~---dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~-~~~~~~~~i~r~ 82 (199)
T PF10707_consen 7 DLIAQGGERDCYQHPD---DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSL-RRGVDWSHIPRF 82 (199)
T ss_pred cccccCCCceEEECCC---CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhh-ccCCcccccccE
Confidence 4699999999997532 2336788887544 335677889888888863 234467889999
Q ss_pred EEEEeecceeEEEEeccc---c----hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEEEeecC
Q 002401 178 YEYFVCQRHLCICFELLD---S----NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV 250 (927)
Q Consensus 178 ~~~f~~~~~l~LVmEy~~---G----sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNILL~~~~ 250 (927)
+++.+.+.-+-+|+|.+. | +|.+++... .+++ .++. .|-+-.+||-+.+|+.+||+|.||++....
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~ 155 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRD 155 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence 999999999999999863 3 677777544 3555 3333 344445677889999999999999998765
Q ss_pred CCC-eEEEee
Q 002401 251 KPA-EIKIID 259 (927)
Q Consensus 251 ~~g-~IKL~D 259 (927)
... .+.|+|
T Consensus 156 ~~~~~lvlID 165 (199)
T PF10707_consen 156 SGEFRLVLID 165 (199)
T ss_pred CCceEEEEEe
Confidence 555 788888
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.94 E-value=9.3e-05 Score=79.08 Aligned_cols=72 Identities=15% Similarity=0.055 Sum_probs=51.5
Q ss_pred EeccCCc-eeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecc
Q 002401 116 LLGHGTF-GQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL 194 (927)
Q Consensus 116 ~LG~Gsf-G~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~ 194 (927)
.|-.|.. ..||++... +..++||+..... .....+|+++++.+.. +--+.+++++....+..+||||++
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~------~~~vP~v~~~~~~~~~~~lv~e~i 74 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAG------KLPVPEVIDYGSDDGRAWLLTSAV 74 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHh------cCCCCeEEEEEecCCccEEEEEee
Confidence 3445555 789999553 3678888886543 3456689999999964 234777888777667789999999
Q ss_pred cch
Q 002401 195 DSN 197 (927)
Q Consensus 195 ~Gs 197 (927)
+|.
T Consensus 75 ~G~ 77 (244)
T cd05150 75 PGV 77 (244)
T ss_pred CCc
Confidence 873
No 463
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.90 E-value=0.0001 Score=77.48 Aligned_cols=127 Identities=24% Similarity=0.340 Sum_probs=93.3
Q ss_pred CceEEEEEeccCCc-eeEEEeeccCCCeEEEEEEEeC---------------Ch-------hhHHHHHHHHHHHHHHhhh
Q 002401 109 RRYIVKDLLGHGTF-GQVAKCWDAEMNSFVAVKIIKN---------------QP-------AYYQQALVEVSILTTLNKK 165 (927)
Q Consensus 109 ~rY~i~~~LG~Gsf-G~Vyka~d~~tg~~VAIKiik~---------------~~-------~~~~~~~~Ei~iL~~L~~~ 165 (927)
.+++.++.||.|.- |.||+++ -.++.+|||+++. .. .+..-+..|.+..-+|+..
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68899999999999 9999994 4577999999431 00 2233567788888888664
Q ss_pred cCCCCCCce--eEEEEEEeecc------------------eeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHH
Q 002401 166 YDREDKHHI--VRIYEYFVCQR------------------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRG 225 (927)
Q Consensus 166 ~~~~~HpnI--Vrl~~~f~~~~------------------~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~a 225 (927)
++..+ |++++++.-.. ...||.||+...- .+.. .-+.+|++-
T Consensus 115 ----~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~----~~~~~~~~d 176 (207)
T PF13095_consen 115 ----GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQI----RDIPQMLRD 176 (207)
T ss_pred ----cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccch----hHHHHHHHH
Confidence 45566 89999875331 2468888876432 1222 235677888
Q ss_pred HhhhccCCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 226 LSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 226 L~yLHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
|..||..||+-+|+|+.|..= -||+|||.+
T Consensus 177 l~~~~k~gI~~~Dv~~~ny~~--------G~lvDfs~~ 206 (207)
T PF13095_consen 177 LKILHKLGIVPRDVKPRNYRG--------GKLVDFSSS 206 (207)
T ss_pred HHHHHHCCeeeccCccccccC--------CEEEecccC
Confidence 889999999999999999864 299999975
No 464
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.87 E-value=6.8e-05 Score=88.98 Aligned_cols=147 Identities=17% Similarity=0.177 Sum_probs=89.9
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCCh--------------------------------hhHH------HHHHHH
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--------------------------------AYYQ------QALVEV 156 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~--------------------------------~~~~------~~~~Ei 156 (927)
+.|+.-+.++|++|+.+. |+.||||+-+..- +..+ .+.+|.
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 579999999999998766 9999999975210 0011 123344
Q ss_pred HHHHHHhhhcCCCC---CCceeEEEEEEeecceeEEEEecccc---hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhc
Q 002401 157 SILTTLNKKYDRED---KHHIVRIYEYFVCQRHLCICFELLDS---NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK 230 (927)
Q Consensus 157 ~iL~~L~~~~~~~~---HpnIVrl~~~f~~~~~l~LVmEy~~G---sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLH 230 (927)
+-..++++.+.... --.|.++|..+ ...-+|+||||+| +-.+.|... +++...+..-+.++..-+- =
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~---gi~~~~i~~~l~~~~~~qI--f 318 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKR---GISPHDILNKLVEAYLEQI--F 318 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHc---CCCHHHHHHHHHHHHHHHH--H
Confidence 33333333222222 11244444332 2457999999997 333455544 3666654443333332222 2
Q ss_pred cCCeeeccCCCCCEEEeec-CCCCeEEEeecCCccccccc
Q 002401 231 DAGIIHCDLKPENILLCTS-VKPAEIKIIDFGSACTEDRT 269 (927)
Q Consensus 231 s~gIVHrDLKPeNILL~~~-~~~g~IKL~DFGlA~~~~~~ 269 (927)
..|++|+|-+|.||++..+ ..+.++.|-|||+.......
T Consensus 319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 4679999999999999743 35789999999998655443
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=97.68 E-value=0.00035 Score=88.02 Aligned_cols=80 Identities=11% Similarity=0.065 Sum_probs=54.8
Q ss_pred EEEeccCCceeEEEeeccCCC--eEEEEEEEeCCh--hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec---ce
Q 002401 114 KDLLGHGTFGQVAKCWDAEMN--SFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---RH 186 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg--~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~---~~ 186 (927)
++.|+.|.+..+|+......+ ..+++|+..... .....+.+|+++|+.|... ..-.+.+++.++.+. +.
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~----~~vpVP~v~~~~~d~~v~G~ 118 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEH----TDVPVPKVYCLCTDASVIGT 118 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhc----CCCCCCcEEEEecCCCcCCC
Confidence 577899999999998654432 356777764321 1234677999999999521 122357788877654 46
Q ss_pred eEEEEecccch
Q 002401 187 LCICFELLDSN 197 (927)
Q Consensus 187 l~LVmEy~~Gs 197 (927)
.|+|||+++|.
T Consensus 119 ~flVME~v~G~ 129 (822)
T PLN02876 119 AFYIMEYLEGR 129 (822)
T ss_pred ceEEEEecCCc
Confidence 78999999874
No 466
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.54 E-value=0.0012 Score=70.07 Aligned_cols=73 Identities=18% Similarity=0.220 Sum_probs=48.2
Q ss_pred EEEeccCCceeEEEeeccC-CCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEe
Q 002401 114 KDLLGHGTFGQVAKCWDAE-MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFE 192 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~-tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmE 192 (927)
++.|..|-...||++.... .++.|++|+............+|+.+++.+... .-+++++..+. -.+|||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~------gl~P~v~~~~~----~~~l~e 72 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKH------GLAPKLYATFQ----NGLIYE 72 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhC------CCCCeEEEEeC----CcEEEE
Confidence 4678888889999996543 356788998765432222334799999998642 22455555433 147999
Q ss_pred cccc
Q 002401 193 LLDS 196 (927)
Q Consensus 193 y~~G 196 (927)
|++|
T Consensus 73 ~i~G 76 (235)
T cd05157 73 FIPG 76 (235)
T ss_pred eeCC
Confidence 9876
No 467
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.50 E-value=0.0012 Score=82.99 Aligned_cols=139 Identities=17% Similarity=0.244 Sum_probs=91.6
Q ss_pred CCCceeEEEEEEeecceeE----EEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCE
Q 002401 170 DKHHIVRIYEYFVCQRHLC----ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI 244 (927)
Q Consensus 170 ~HpnIVrl~~~f~~~~~l~----LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNI 244 (927)
.|+|++.++.+-..+...- +..|+|.. .+...+... ..++.+.++.+..++++||+|+|+....|.-|...-.
T Consensus 240 ~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~ 317 (1351)
T KOG1035|consen 240 AHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSS 317 (1351)
T ss_pred ccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccc
Confidence 4899999988876553322 33355553 555555443 3588999999999999999999998555444433322
Q ss_pred EEeecCCCCeEEEe--ecCCcccccccc--eeeccCCCCCCcchhcCCCCCc--hhHHHHHHHHHHHHHhCC
Q 002401 245 LLCTSVKPAEIKII--DFGSACTEDRTV--YSYIQSRYYRSPEVLLGYQYTT--AIDMWSFGCIVAELFLGL 310 (927)
Q Consensus 245 LL~~~~~~g~IKL~--DFGlA~~~~~~~--~~~~gT~~Y~APEvl~~~~ys~--ksDIWSLG~ILyELlTG~ 310 (927)
.-...+..+.+.+. ||+......... .....+..+.++|......+.. ..|+|.+|..+..+..+.
T Consensus 318 ~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~ 389 (1351)
T KOG1035|consen 318 KESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGE 389 (1351)
T ss_pred cccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcC
Confidence 22222344555555 888776543332 2234456688888887766554 479999999998888764
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.48 E-value=0.00066 Score=72.43 Aligned_cols=72 Identities=11% Similarity=0.015 Sum_probs=44.2
Q ss_pred EEeccCCce-eEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec---ceeEEE
Q 002401 115 DLLGHGTFG-QVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---RHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG-~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~---~~l~LV 190 (927)
+.|+.|+.. .||++. ..+++|+.+.. .......+|.++|+.|.... . --+.++++..... ...++|
T Consensus 3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~-~~~~~~~~E~~~l~~L~~~~-~---v~vP~~~~~~~~~~~~~~~~~l 72 (235)
T cd05155 3 EPVDSGGTDNATFRLG-----DDMSVRLPSAA-GYAGQVRKEQRWLPRLAPHL-P---LPVPEPLGKGEPGEGYPWPWSV 72 (235)
T ss_pred eeccCCCcccceEEcC-----CceEEEcCCcc-chHHHHHHHHHHHHHHhccC-C---CCCCceeecCCCccCCCcceEE
Confidence 467766666 589872 24677876643 23457888999999996420 1 1244444433322 245889
Q ss_pred Eecccc
Q 002401 191 FELLDS 196 (927)
Q Consensus 191 mEy~~G 196 (927)
||+++|
T Consensus 73 ~~~i~G 78 (235)
T cd05155 73 YRWLEG 78 (235)
T ss_pred EEeecC
Confidence 999876
No 469
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.47 E-value=0.0004 Score=71.42 Aligned_cols=132 Identities=25% Similarity=0.198 Sum_probs=89.5
Q ss_pred CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeE
Q 002401 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC 188 (927)
Q Consensus 109 ~rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~ 188 (927)
...++.+.|++|.++.||++. ..+..+|+|+-+.+. ....+..|.++|..++.. ---.++|.+- ..+
T Consensus 22 ~~~~v~~~L~KG~~s~Vyl~~--~~~~~~a~Kvrr~ds-~r~~l~kEakiLeil~g~------~~~p~vy~yg----~~~ 88 (201)
T COG2112 22 YELRVEKELAKGTTSVVYLGE--WRGGEVALKVRRRDS-PRRNLEKEAKILEILAGE------GVTPEVYFYG----EDF 88 (201)
T ss_pred hhhhhhhhhhcccccEEEEee--ccCceEEEEEecCCc-chhhHHHHHHHHHHhhhc------CCCceEEEec----hhh
Confidence 445567889999999999994 456689999987653 356778899999998643 1233444442 334
Q ss_pred EEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCC-CCCEEEeecCCCCeEEEeecCCccc
Q 002401 189 ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLK-PENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 189 LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLK-PeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
+.|||+.| .|.+..... + ++-+..+++.---|-..||-|..|. |..++|. .+..+.|+||..|..
T Consensus 89 i~me~i~G~~L~~~~~~~-----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv---~~~~~~iIDFd~At~ 155 (201)
T COG2112 89 IRMEYIDGRPLGKLEIGG-----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLV---NDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhcCcchhhhhhcc-----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEe---cCCcEEEEEccchhh
Confidence 56999998 555443211 1 3334566666666777899999886 4444442 345899999999863
No 470
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.26 E-value=0.0053 Score=71.18 Aligned_cols=77 Identities=22% Similarity=0.255 Sum_probs=55.5
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeC------C--hhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN------Q--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~------~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~ 185 (927)
.+.||.|.+..||++.+...++.|+||.-.. + ....++...|.+.|+.+... .-.++++++.+ +.+
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~----~p~~VPkV~~~--D~~ 104 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKY----VPDLVPKVYHY--DEE 104 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhh----CCCCCCeEEEE--CCC
Confidence 3679999999999998865546799998431 1 12456677899999998642 12357777776 446
Q ss_pred eeEEEEecccc
Q 002401 186 HLCICFELLDS 196 (927)
Q Consensus 186 ~l~LVmEy~~G 196 (927)
..++|||++++
T Consensus 105 ~~~lVME~L~~ 115 (401)
T PRK09550 105 LAVTVMEDLSD 115 (401)
T ss_pred CCEEEEecCCC
Confidence 67899999874
No 471
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.22 E-value=0.0022 Score=72.44 Aligned_cols=139 Identities=22% Similarity=0.248 Sum_probs=96.4
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---------------------------hhhHHHHHHHHHHHHHHhhh
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---------------------------PAYYQQALVEVSILTTLNKK 165 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~---------------------------~~~~~~~~~Ei~iL~~L~~~ 165 (927)
|-.+|..|--+.||.|.. .+|..+|||+++.. +.....+..|++-|++|+..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 456788999999999954 55677999998621 11223356688888888654
Q ss_pred cCCCCCCceeEEEEEEeecceeEEEEecccchhH--HHHHhhccCCCCHHHHHHHHHHHHHHHhhh-ccCCeeeccCCCC
Q 002401 166 YDREDKHHIVRIYEYFVCQRHLCICFELLDSNLY--ELIKINHFRGLSLSIVQLFSKQILRGLSLL-KDAGIIHCDLKPE 242 (927)
Q Consensus 166 ~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~GsL~--dlL~~~~~~~L~e~~i~~i~~QIl~aL~yL-Hs~gIVHrDLKPe 242 (927)
-. .+|--+-| ...+|||+|++.+-+ -.|+.. .++...+..+-.|++.-+.-| |.+++||.||.=-
T Consensus 227 GI--P~PePIlL-------k~hVLVM~FlGrdgw~aPkLKd~---~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEf 294 (520)
T KOG2270|consen 227 GI--PCPEPILL-------KNHVLVMEFLGRDGWAAPKLKDA---SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEF 294 (520)
T ss_pred CC--CCCCceee-------ecceEeeeeccCCCCcCcccccc---cCChHHHHHHHHHHHHHHHHHHHHhceeccchhhh
Confidence 21 12222211 235799999984321 122222 377778888888888888877 4689999999999
Q ss_pred CEEEeecCCCCeEEEeecCCcccccc
Q 002401 243 NILLCTSVKPAEIKIIDFGSACTEDR 268 (927)
Q Consensus 243 NILL~~~~~~g~IKL~DFGlA~~~~~ 268 (927)
|+|+ .++.+.|+|-+-+...+.
T Consensus 295 N~Ly----hdG~lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 295 NLLY----HDGKLYIIDVSQSVEHDH 316 (520)
T ss_pred hheE----ECCEEEEEEccccccCCC
Confidence 9999 468999999987755443
No 472
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.06 E-value=0.0029 Score=69.86 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=47.8
Q ss_pred EEEeccCCceeEEEeeccC------CCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeeccee
Q 002401 114 KDLLGHGTFGQVAKCWDAE------MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL 187 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~------tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l 187 (927)
++.|..|-...||++.... .++.|++|+............+|+++++.+... --..+++.++..
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~------g~~P~~~~~~~~---- 72 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSER------NLGPKLYGIFPN---- 72 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhC------CCCCceEEEeCC----
Confidence 3556677777889886543 257899999876544444567899999999653 123455555432
Q ss_pred EEEEecccc
Q 002401 188 CICFELLDS 196 (927)
Q Consensus 188 ~LVmEy~~G 196 (927)
.+|+||++|
T Consensus 73 ~~v~e~i~G 81 (302)
T cd05156 73 GRIEEFIPS 81 (302)
T ss_pred CchhheeCC
Confidence 357888765
No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.06 E-value=0.0019 Score=69.73 Aligned_cols=132 Identities=16% Similarity=0.109 Sum_probs=72.7
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCChhhH-HHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEeccc
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYY-QQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD 195 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~-~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~ 195 (927)
+..|-...+|++. .+++.+++|+........ -...+|.++++.+... .-..+++.... -++||||++
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~------g~~P~~i~~~~----~~~v~e~i~ 71 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSAL------GLAPKPILVNE----HWLLVEWLE 71 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhc------CCCCceEEEeC----CEEEEEecc
Confidence 5567778899885 446678888865432221 2346799999999642 11233443332 368999988
Q ss_pred chhH---------------HHHHhhcc-----CCCCH-HHHHHHHHH------------HHHHHhhhc-----cCCeeec
Q 002401 196 SNLY---------------ELIKINHF-----RGLSL-SIVQLFSKQ------------ILRGLSLLK-----DAGIIHC 237 (927)
Q Consensus 196 GsL~---------------dlL~~~~~-----~~L~e-~~i~~i~~Q------------Il~aL~yLH-----s~gIVHr 237 (927)
|... +.+.+-.. ..+.. ..+..+..+ +++.+.... ...++|+
T Consensus 72 G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~ 151 (256)
T TIGR02721 72 GEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHM 151 (256)
T ss_pred CcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecC
Confidence 6221 11111110 01111 112222111 122221111 1258999
Q ss_pred cCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 238 DLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 238 DLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
|+.|.||+++ .++ ++|+||..|.
T Consensus 152 Dl~~~Nil~~---~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 152 DVHAYNLVVT---PQG-LKLIDWEYAS 174 (256)
T ss_pred CCCcCcEEEe---CCC-CEEEeccccC
Confidence 9999999995 223 7899998874
No 474
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.05 E-value=0.0033 Score=69.11 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=80.4
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE------EEeeccee
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE------YFVCQRHL 187 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~------~f~~~~~l 187 (927)
++.|..|....+|++.. .+..+++|+... ........|+++++.|... +- .+.+++. +....+..
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~----g~-~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAER----GL-PVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHC----CC-CCCccccCCCCcEeeeeCCce
Confidence 56777888889999854 334688898875 2345667799999998653 11 2444443 22334567
Q ss_pred EEEEecccchhH------------HHHHhhc--cCCCC--------HHHHH------------HHHHHHHHHHhhhcc--
Q 002401 188 CICFELLDSNLY------------ELIKINH--FRGLS--------LSIVQ------------LFSKQILRGLSLLKD-- 231 (927)
Q Consensus 188 ~LVmEy~~GsL~------------dlL~~~~--~~~L~--------e~~i~------------~i~~QIl~aL~yLHs-- 231 (927)
++|+++++|... +.+..-. ...+. ..... .....+..++.++.+
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 899999976221 1110000 00000 00000 011112233444432
Q ss_pred -----CCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 232 -----AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 232 -----~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.++||+|+.|.|||++ .+..+.|+||+.+.
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~---~~~~~~iIDfe~a~ 204 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFD---GDELSGVIDFYFAC 204 (296)
T ss_pred hhcCCCcCCccCcCcccEEEe---CCceEEEeehhhhc
Confidence 4799999999999995 44556899999874
No 475
>PRK05231 homoserine kinase; Provisional
Probab=97.04 E-value=0.0083 Score=66.82 Aligned_cols=78 Identities=5% Similarity=-0.086 Sum_probs=46.8
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEE---EEEeecceeEEE
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIY---EYFVCQRHLCIC 190 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~---~~f~~~~~l~LV 190 (927)
++.|..|....+|++... .+ .+++|++.. ...+....|+.+++.|... ....|.++.-. .+....+..++|
T Consensus 27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~--glpvP~~i~~~~G~~~~~~~g~~~~l 100 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--LTAEDLPFFLGLMQHLAAR--GVPVPAPVARRDGAALGELAGKPAAI 100 (319)
T ss_pred cchhccccccceEEEEeC-CC-cEEEEEecc--CChHHhHHHHHHHHHHHHC--CCCCCcceeCCCCCEeeeeCCEEEEE
Confidence 345777887899998643 33 588898762 1234555678888888643 11123333211 122335678999
Q ss_pred Eecccch
Q 002401 191 FELLDSN 197 (927)
Q Consensus 191 mEy~~Gs 197 (927)
+|+++|.
T Consensus 101 ~~~l~G~ 107 (319)
T PRK05231 101 VTFLEGK 107 (319)
T ss_pred EEecCCC
Confidence 9998863
No 476
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.80 E-value=0.0034 Score=73.39 Aligned_cols=173 Identities=23% Similarity=0.365 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec-ceeEEEEecccchhHHHHHhhccCCCCHHHHHHHHHHHHHHHhh
Q 002401 150 QQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSL 228 (927)
Q Consensus 150 ~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~-~~l~LVmEy~~GsL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~y 228 (927)
.+++-..++++.+ .|+|....+++-... ....+|||++..+|++.++..... .. +++
T Consensus 27 ~~ilgr~~~lktl-------~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~l~---~~-------s~~----- 84 (725)
T KOG1093|consen 27 IQILGRFQYLKSL-------QHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGNLK---DE-------SLL----- 84 (725)
T ss_pred HHHhhhhHHHHhh-------cCccceeeEeeecCccceEEEEehhhccchHHHHHhcccc---hh-------hhc-----
Confidence 3445566677777 588999998877643 458899999999999988765411 11 111
Q ss_pred hccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcccccccceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHh
Q 002401 229 LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL 308 (927)
Q Consensus 229 LHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~~~~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlT 308 (927)
.+++.| -|| ++++| -++.. | |- ...+|+|||++|.|+.|+..
T Consensus 85 --~~~~~~-----~~~----------~~~td-~~~t~-------------~--~~-----~~~pKsdVwsl~~i~~el~L 126 (725)
T KOG1093|consen 85 --AHGVLH-----LNI----------IYITD-HFLTK-------------Y--PS-----PIGPKSDVWSLGFIILELYL 126 (725)
T ss_pred --ccccce-----ehh----------hhccc-ccccc-------------C--CC-----CCCcchhhhhHHHHHHHHHH
Confidence 222222 122 23333 11100 0 10 11149999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCChHHHHHhhhcchhhhhcCCccccCCCccccCCccchhhhhHHHHHHHhhcCCcC
Q 002401 309 GLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLI 388 (927)
Q Consensus 309 G~~PF~g~s~~d~l~~I~~~lG~~PP~~~l~~~~~~~~~f~~~~~~~~~~~~~~~i~~~~~y~~~t~~e~e~~~~~~p~~ 388 (927)
|...+......+++..|.+..- .+-+. .. ..
T Consensus 127 ~~~l~~~~~~s~~l~~i~k~~~-~d~~~-~~----------------------------------~a------------- 157 (725)
T KOG1093|consen 127 GISLEAELTESEYLEILLKYYT-DDQEL-LS----------------------------------TA------------- 157 (725)
T ss_pred hhHHHHHHHHHHHHHHHHHhcc-CchhH-HH----------------------------------HH-------------
Confidence 9888876666666655554322 11000 00 00
Q ss_pred CcccccccchHHHHhhCCCCCCCChhhhhhhhhhHHHHHHHHHhccccCcCCCCCHHHHHhCCCcCCC
Q 002401 389 GKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (927)
Q Consensus 389 ~~~~f~~~~L~~il~~~P~~~~ls~e~i~~e~~~s~~l~DLI~kML~~DP~kRpTA~EaLqHPwf~~~ 456 (927)
.|. .-.-.++..+++++.+|+-..|..|+...++++|+-|++.
T Consensus 158 ------------------------~e~-~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 158 ------------------------MEH-LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred ------------------------HHH-HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 000 0011234578899999999999999999999999999875
No 477
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.67 E-value=0.023 Score=63.21 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=79.4
Q ss_pred EEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE------Eeecc
Q 002401 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY------FVCQR 185 (927)
Q Consensus 112 ~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~------f~~~~ 185 (927)
..++.|+.|....||++.. .++ .+++|+..... .......|++++..|... .-.|.+++.. ....+
T Consensus 25 ~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~-----g~pvp~~i~t~~g~~~~~~~g 96 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KAEELPFFLALTTHLAAR-----GLPVPKPVKSRDGRQLSTLAG 96 (307)
T ss_pred eeccccCCccccceEEEEe-CCC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHC-----CCCCCccccCCCCCeehhcCC
Confidence 3456677887789999853 233 47788876432 134556788888888543 1123444331 12345
Q ss_pred eeEEEEecccchh-----HH-------HHHhhc--cCCC--------CHHH-----HH----------HHHHHHHHHHhh
Q 002401 186 HLCICFELLDSNL-----YE-------LIKINH--FRGL--------SLSI-----VQ----------LFSKQILRGLSL 228 (927)
Q Consensus 186 ~l~LVmEy~~GsL-----~d-------lL~~~~--~~~L--------~e~~-----i~----------~i~~QIl~aL~y 228 (927)
..++||||++|.- .+ .+..-. ...+ .... .. .....+...+++
T Consensus 97 ~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 176 (307)
T TIGR00938 97 KPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDY 176 (307)
T ss_pred eEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHH
Confidence 6789999987621 11 110000 0001 0000 00 001122334444
Q ss_pred hc-------cCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 229 LK-------DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 229 LH-------s~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
|. ..++||+|+++.||+++ .++.+.|+||+.+.
T Consensus 177 l~~~~~~~~~~~l~HgD~~~~Nvl~~---~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 177 LDKFWPRDLPRGVIHADLFPDNVLFD---GDSVKGVIDFYFAC 216 (307)
T ss_pred HHhhhhhcCCCccCCCCCCcCcEEEE---CCceEEEeeccccc
Confidence 43 36899999999999995 34556899999874
No 478
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.65 E-value=0.0014 Score=73.05 Aligned_cols=134 Identities=18% Similarity=0.260 Sum_probs=92.5
Q ss_pred ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC----------Chh-------------hHHHHHHHHHHHHHHhhhc
Q 002401 110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----------QPA-------------YYQQALVEVSILTTLNKKY 166 (927)
Q Consensus 110 rY~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~----------~~~-------------~~~~~~~Ei~iL~~L~~~~ 166 (927)
-+.+.+.||-|--+.||.+-+. .|+..++|+-+. +.. ..-.+.+|...|+.|...
T Consensus 93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~- 170 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER- 170 (465)
T ss_pred hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc-
Confidence 4678889999999999999765 456677887431 111 112356788888888542
Q ss_pred CCCCCCceeEEEEEEeecceeEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccCCeeeccCCCCCEE
Q 002401 167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENIL 245 (927)
Q Consensus 167 ~~~~HpnIVrl~~~f~~~~~l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~gIVHrDLKPeNIL 245 (927)
.--|.+.+++ +..|+|||++.| .|.++... ..+..+...|..-+.-|-.+|+||+|..-=||+
T Consensus 171 ----gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v--------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNim 234 (465)
T KOG2268|consen 171 ----GFPVPKPIDH----NRHCVVMELVDGYPLRQVRHV--------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIM 234 (465)
T ss_pred ----CCCCCCcccc----cceeeHHHhhcccceeeeeec--------CChHHHHHHHHHHHHHHHHcCceecccchheeE
Confidence 1235565554 456899999986 45443222 123445555666667788899999999999999
Q ss_pred EeecCCCCeEEEeecCCcc
Q 002401 246 LCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 246 L~~~~~~g~IKL~DFGlA~ 264 (927)
+. +++.++++||--..
T Consensus 235 v~---dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 235 VK---DDDKIVVIDFPQMV 250 (465)
T ss_pred Ee---cCCCEEEeechHhh
Confidence 94 57889999997553
No 479
>PLN02236 choline kinase
Probab=96.61 E-value=0.013 Score=66.54 Aligned_cols=138 Identities=18% Similarity=0.140 Sum_probs=76.3
Q ss_pred EEeccCCceeEEEeeccC----CCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEE
Q 002401 115 DLLGHGTFGQVAKCWDAE----MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCIC 190 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~----tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LV 190 (927)
+.|-.|-...+|++.... .++.|++|+........-.-.+|+.+++.+... .--.++++.+... .|
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~------gl~P~~~~~~~~g----~v 111 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRH------GQGPRLLGRFPNG----RV 111 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHc------CCCCceEEEECCc----eE
Confidence 455557778888875322 346788998875433222335799999999653 2233455555322 46
Q ss_pred Eecccc-hhH--------------HHHHhhccC-------CCCHHHHHHHHHHHH--------------------HHHhh
Q 002401 191 FELLDS-NLY--------------ELIKINHFR-------GLSLSIVQLFSKQIL--------------------RGLSL 228 (927)
Q Consensus 191 mEy~~G-sL~--------------dlL~~~~~~-------~L~e~~i~~i~~QIl--------------------~aL~y 228 (927)
.||+++ .|. +.+.+-... ....+.+..++.++. ..|..
T Consensus 112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 191 (344)
T PLN02236 112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK 191 (344)
T ss_pred EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence 777764 221 111111000 011223333332211 11111
Q ss_pred -----hccCCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 229 -----LKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 229 -----LHs~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.+...++|+||++.|||++ +.++.++|+||..|.
T Consensus 192 ~~~~~~~~~~~cH~Dl~~~Nil~~--~~~~~~~lID~Eya~ 230 (344)
T PLN02236 192 ELSGDDQEIGFCHNDLQYGNIMID--EETRAITIIDYEYAS 230 (344)
T ss_pred HhcccCCCceEEeCCCCcCcEEEe--CCCCcEEEEeehhcc
Confidence 2234689999999999996 334689999998874
No 480
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.57 E-value=0.014 Score=65.91 Aligned_cols=72 Identities=13% Similarity=0.148 Sum_probs=42.7
Q ss_pred EEeccCCceeEEEeeccCC---CeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 115 DLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~t---g~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
+.|..|-...+|++..... ...|++|+........-.-.+|+.+++.+... .--.+++.++. .+ +|.
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~------gl~P~~l~~~~-~G---~i~ 89 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAA------GFGAKLLGVFG-NG---MIQ 89 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhc------CCCCceeEEeC-Cc---Eee
Confidence 4455577778888854322 23788998865433222335799999999653 11245555553 22 467
Q ss_pred ecccc
Q 002401 192 ELLDS 196 (927)
Q Consensus 192 Ey~~G 196 (927)
+|+++
T Consensus 90 ~fi~g 94 (330)
T PLN02421 90 SFINA 94 (330)
T ss_pred hhhcC
Confidence 77664
No 481
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.43 E-value=0.0063 Score=63.44 Aligned_cols=100 Identities=19% Similarity=0.272 Sum_probs=75.5
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEeccc-chhHHHHH-hhccCCCCHHHHHHHHHHHHHHHhhhcc
Q 002401 154 VEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLD-SNLYELIK-INHFRGLSLSIVQLFSKQILRGLSLLKD 231 (927)
Q Consensus 154 ~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~-GsL~dlL~-~~~~~~L~e~~i~~i~~QIl~aL~yLHs 231 (927)
.|.-+|+.+.. .+++++++++|- ..+|.||+. +.++.... .......++..+.+|+.++++.+.+|+.
T Consensus 8 ~E~lll~~l~~------~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~ 77 (188)
T PF12260_consen 8 NEPLLLQLLQG------SEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDH 77 (188)
T ss_pred cHHHHHHHcCC------CCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 58888888854 348999999883 256889988 34432100 0011236899999999999999999987
Q ss_pred ---CCeeeccCCCCCEEEeecCCCCeEEEeecCCcccc
Q 002401 232 ---AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE 266 (927)
Q Consensus 232 ---~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~~ 266 (927)
..+.-+|++++|+.++ +++++|++|...+...
T Consensus 78 ~~~~~~~lcDv~~~nfgv~---~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 78 GPLGFFYLCDVSPDNFGVN---DDGRLKLIDLDDVFVE 112 (188)
T ss_pred CCCCcEEEeecchHHeEEe---CCCcEEEEechhcchh
Confidence 4588899999999995 6688999999887543
No 482
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.10 E-value=0.048 Score=62.42 Aligned_cols=73 Identities=22% Similarity=0.244 Sum_probs=50.4
Q ss_pred EeccCCceeEEEeeccCCCeEEEEEEEeC-------C-hhhHHHHHHHHHHHHHHhhhcCCCCCC-ceeEEEEEEeecce
Q 002401 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKN-------Q-PAYYQQALVEVSILTTLNKKYDREDKH-HIVRIYEYFVCQRH 186 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg~~VAIKiik~-------~-~~~~~~~~~Ei~iL~~L~~~~~~~~Hp-nIVrl~~~f~~~~~ 186 (927)
.||.|....||++.+...++-|+||.-.. . +...++...|..+|+.+... .| .++++|. .+.+.
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~-----~P~~vP~vy~--~D~e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEH-----VPHLVPRIFH--FDTEM 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhcc-----CccccCeEEE--Ecccc
Confidence 47899999999998764446788887431 1 23345667899999887653 33 4556554 34556
Q ss_pred eEEEEeccc
Q 002401 187 LCICFELLD 195 (927)
Q Consensus 187 l~LVmEy~~ 195 (927)
..+|||+++
T Consensus 75 ~~~vMEdL~ 83 (370)
T TIGR01767 75 AVTVMEDLS 83 (370)
T ss_pred ceehHhhCc
Confidence 779999985
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.79 E-value=0.049 Score=60.13 Aligned_cols=46 Identities=17% Similarity=0.035 Sum_probs=30.2
Q ss_pred eccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhh
Q 002401 117 LGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNK 164 (927)
Q Consensus 117 LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~ 164 (927)
+++|-...|+.+. ...++.+++|+-+.. .......+|+++|+.|..
T Consensus 19 ~~~g~~~~v~~i~-~~~g~~~VlR~p~~~-~~~~~l~rE~~vL~~L~~ 64 (276)
T cd05152 19 NESGLDFQVVFAK-DTDGVPWVLRIPRRP-DVSERAAAEKRVLALVRK 64 (276)
T ss_pred cCCcceeEEEEEE-cCCCCeEEEEecCCH-HHHHHHHHHHHHHHHHHh
Confidence 4555556667662 234667778876532 334567899999999965
No 484
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.71 E-value=0.031 Score=58.68 Aligned_cols=31 Identities=45% Similarity=0.598 Sum_probs=20.6
Q ss_pred CCeeeccCCCCCEEEeecCCCCeEEEeecCCcc
Q 002401 232 AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (927)
Q Consensus 232 ~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~ 264 (927)
.-++|.||.+.|||+. ..++.++|+||..|.
T Consensus 143 ~v~cHnDl~~~Nil~~--~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 143 LVFCHNDLNPGNILIN--NKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEEE-S--SGGGEEET--SSSSCEEE--GTT-E
T ss_pred ceEeeccCccccEEec--cCCCeEEEecHHHHh
Confidence 3589999999999993 466889999999874
No 485
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.63 E-value=0.19 Score=55.42 Aligned_cols=63 Identities=17% Similarity=0.152 Sum_probs=38.5
Q ss_pred eEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE------EeecceeEEEEecccc
Q 002401 124 QVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY------FVCQRHLCICFELLDS 196 (927)
Q Consensus 124 ~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~------f~~~~~l~LVmEy~~G 196 (927)
.||++... .+ .+++|++... ......|+.++..|... + -.|++++.. ...++..++|+|+++|
T Consensus 11 ~v~~v~t~-~g-~~~LK~~~~~---~~~~~~~~~~~~~L~~~----g-~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G 79 (313)
T TIGR02906 11 NVYKVETD-SG-NKCLKKINYP---PERLLFILGAQEHLRKN----G-FNIPKILKTKDGELYVKYNGDLYVLTEWIEG 79 (313)
T ss_pred cEEEEEeC-CC-CeEEEEcCCC---HHHHHHHHHHHHHHHHc----C-CCCCceeecCCCCEEEEECCEEEEEehhccC
Confidence 48888532 23 5788988643 23455678888888553 1 133344322 2335678999999876
No 486
>PRK10593 hypothetical protein; Provisional
Probab=95.46 E-value=0.078 Score=59.12 Aligned_cols=107 Identities=11% Similarity=0.087 Sum_probs=74.2
Q ss_pred EEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEee---cceeE
Q 002401 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---QRHLC 188 (927)
Q Consensus 112 ~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~---~~~l~ 188 (927)
.-.+.||.|..+.||+..+.. + .+++|+.+.. .....+..|.+.|+.|... .--.|.++++++.. .+..+
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~~-~~~~~~~~Ea~~L~~L~~~----~~vpVP~V~~~~~~~~~~g~~~ 89 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQ-G-NPMPLMARSF-STPGVAQQEAWKLSMLARS----GTVRMPTVYGVMTHEQSPGPDV 89 (297)
T ss_pred heeeecCCccceeEEEEEcCC-C-CEEEEEeccc-ccchHHHHHHHHHHHHccC----CCCCcCcEEEEeccCCcCCCeE
Confidence 345689999999999985433 3 3667775531 1235778999999999642 11357788877754 36689
Q ss_pred EEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhccC
Q 002401 189 ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA 232 (927)
Q Consensus 189 LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs~ 232 (927)
||||+++| .+.+. .........+..+++++|+-||+.
T Consensus 90 LVmE~i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 90 LLLERLRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred EEEeccCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 99999997 34331 123445667778899999999975
No 487
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.42 E-value=0.21 Score=56.39 Aligned_cols=70 Identities=17% Similarity=0.025 Sum_probs=43.2
Q ss_pred CceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEE---E--EEeecceeEEEEeccc
Q 002401 121 TFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIY---E--YFVCQRHLCICFELLD 195 (927)
Q Consensus 121 sfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~---~--~f~~~~~l~LVmEy~~ 195 (927)
.-..||++.. .+++.+++|+.+...........|++.+..|... +-| |+... + +...++..+.|+++++
T Consensus 37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~----gip-v~~p~~~~G~~~~~~~g~~~~l~~~~~ 110 (325)
T PRK11768 37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEA----EIP-VVAPLAFNGQTLHEHQGFRFALFPRRG 110 (325)
T ss_pred ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC----CCC-CCCCccCCCCEEEEECCEEEEEEeeeC
Confidence 3356888754 3455699999865443456677899999988653 122 22211 1 2233566788999887
Q ss_pred c
Q 002401 196 S 196 (927)
Q Consensus 196 G 196 (927)
|
T Consensus 111 G 111 (325)
T PRK11768 111 G 111 (325)
T ss_pred C
Confidence 5
No 488
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.40 E-value=0.15 Score=56.92 Aligned_cols=76 Identities=11% Similarity=0.061 Sum_probs=51.3
Q ss_pred EEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEE
Q 002401 112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF 191 (927)
Q Consensus 112 ~i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVm 191 (927)
+-.+.|+.|....+|+.. .+++.+.||+-.. .....+..|.+-|+.|... .--.+++++.+....+.-+|||
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~--~~~~~f~~Ea~gL~~L~~~----~~~~vP~vi~~G~~~~~~fLll 91 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSE--SGRDMFEGEAEGLKALAEA----NPIRVPKVIAWGEYDDDAFLLL 91 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEG--GGCCHHHHHHHHHHHHCHT----TTSBS--EEEEEE-SSCCEEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecCh--hhHHHHHHHHHHHHHHHhc----CCCCCCeEEEEEeecCCceEEE
Confidence 345678999999999985 6677899999873 3345677899999999543 2346888999888888889999
Q ss_pred eccc
Q 002401 192 ELLD 195 (927)
Q Consensus 192 Ey~~ 195 (927)
||++
T Consensus 92 e~l~ 95 (288)
T PF03881_consen 92 EFLE 95 (288)
T ss_dssp E---
T ss_pred Eeec
Confidence 9986
No 489
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=95.30 E-value=0.0056 Score=78.78 Aligned_cols=141 Identities=13% Similarity=-0.029 Sum_probs=103.4
Q ss_pred CCCceeEEEEEEee--cceeEEEEeccc-chhHHHHHhhcc--CCCCHHHHHHHHHHHHHHHhhhccC-----CeeeccC
Q 002401 170 DKHHIVRIYEYFVC--QRHLCICFELLD-SNLYELIKINHF--RGLSLSIVQLFSKQILRGLSLLKDA-----GIIHCDL 239 (927)
Q Consensus 170 ~HpnIVrl~~~f~~--~~~l~LVmEy~~-GsL~dlL~~~~~--~~L~e~~i~~i~~QIl~aL~yLHs~-----gIVHrDL 239 (927)
.|+++...+.-... ....+++++++. |++...+.+.-. ..+.+.-+.....+.+.+..-+|+. -.+|++|
T Consensus 1287 ~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~L 1366 (2724)
T KOG1826|consen 1287 KHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSL 1366 (2724)
T ss_pred hceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhh
Confidence 46777665544432 346789999997 788888766532 2344555555555557777777754 2789999
Q ss_pred CCCCEEEeecCCCCeEEEeecCCcccccc---cceeeccCCCCCCcchhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 002401 240 KPENILLCTSVKPAEIKIIDFGSACTEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF 313 (927)
Q Consensus 240 KPeNILL~~~~~~g~IKL~DFGlA~~~~~---~~~~~~gT~~Y~APEvl~~~~ys~ksDIWSLG~ILyELlTG~~PF 313 (927)
|+-|.+| ..+..+|+.++|+.+.... ......+++.|+++++.....++.++|||..+|.+|++.-|..+|
T Consensus 1367 kf~lpmI---Vtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1367 KFTLPMI---VTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred hhhccce---ecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 9999999 4667899999999983222 122346678899999998889999999999999999998776666
No 490
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.26 E-value=0.13 Score=59.70 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=53.3
Q ss_pred EEEeccCCceeEEEeeccCCCeEEEEEEEe----C--C-hhhHHHHHHHHHHHHHHhhhcCCCCCC-ceeEEEEEEeecc
Q 002401 114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIK----N--Q-PAYYQQALVEVSILTTLNKKYDREDKH-HIVRIYEYFVCQR 185 (927)
Q Consensus 114 ~~~LG~GsfG~Vyka~d~~tg~~VAIKiik----~--~-~~~~~~~~~Ei~iL~~L~~~~~~~~Hp-nIVrl~~~f~~~~ 185 (927)
.+.||.|.-..||++.+...++-|+||.-. . + +...++...|.++|+.+... .| .++++|.+ +..
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~-----~P~~VP~vy~~--D~e 106 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEEL-----APGLVPKVYLF--DSV 106 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhh-----CCCcCCeEEEE--CcH
Confidence 567899999999999875445668888743 1 1 33456778899999988653 33 46666553 556
Q ss_pred eeEEEEeccc
Q 002401 186 HLCICFELLD 195 (927)
Q Consensus 186 ~l~LVmEy~~ 195 (927)
..++|||+++
T Consensus 107 ~~~~vMEdL~ 116 (409)
T PRK12396 107 MNCCVMEDLS 116 (409)
T ss_pred HhhHHHHhCc
Confidence 6788999985
No 491
>PTZ00384 choline kinase; Provisional
Probab=95.02 E-value=0.21 Score=57.87 Aligned_cols=74 Identities=14% Similarity=0.047 Sum_probs=43.1
Q ss_pred EEEEeccCCceeEEEeeccCC-C-----eEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecce
Q 002401 113 VKDLLGHGTFGQVAKCWDAEM-N-----SFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~t-g-----~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~ 186 (927)
.++.|..|-...+|++..... + +.|.+++........-.-.+|+++++.|.. +..-.++++.|..
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~------~glgP~l~~~f~~--- 124 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGD------NNFGPKIIGRFGD--- 124 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHh------CCCCCeEEEecCC---
Confidence 344565688888998854322 1 225555543222222233468999999964 3345566666642
Q ss_pred eEEEEecccc
Q 002401 187 LCICFELLDS 196 (927)
Q Consensus 187 l~LVmEy~~G 196 (927)
++|.||++|
T Consensus 125 -g~l~efIeG 133 (383)
T PTZ00384 125 -FTIQEWVEG 133 (383)
T ss_pred -EEEEEEecc
Confidence 588888875
No 492
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.87 E-value=0.29 Score=57.08 Aligned_cols=76 Identities=14% Similarity=0.146 Sum_probs=52.1
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEe-----CCh---hhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK-----NQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik-----~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
..+.||.|....||++.+. +..|+||.-. ... ....+...|.+.|+.+... .-..+.+++.++.
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~----~p~~VPkVy~~de-- 107 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRL----CPDHVPEVYHFDR-- 107 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhc----CCCCCCeEEEECC--
Confidence 3577899999999999763 3458888754 111 1345556678888777532 1236888888776
Q ss_pred ceeEEEEecccc
Q 002401 185 RHLCICFELLDS 196 (927)
Q Consensus 185 ~~l~LVmEy~~G 196 (927)
+..+||||++++
T Consensus 108 d~~vlvME~L~~ 119 (418)
T PLN02756 108 TMALIGMRYLEP 119 (418)
T ss_pred CCCEEEEeecCC
Confidence 456889999965
No 493
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=94.48 E-value=0.35 Score=54.66 Aligned_cols=76 Identities=8% Similarity=0.040 Sum_probs=43.8
Q ss_pred EEEEeccCCceeEEEeeccCCCeEEEEEEEe---CChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecc--ee
Q 002401 113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK---NQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR--HL 187 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~tg~~VAIKiik---~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~--~l 187 (927)
+++.+-.|.-..+|...+. ++.+++. .. ..........+|.++|+.+... ---+.+.+.+|..+. ..
T Consensus 29 ~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~-----~vP~p~~~~~~~~~~~g~p 100 (321)
T COG3173 29 IVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDV-----DVPVPRAFGLCGEGYLGTP 100 (321)
T ss_pred eeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCC-----CCCCcccccccccCCCCCc
Confidence 3444444444445555443 6666676 22 1123345566788888888432 122445566666554 67
Q ss_pred EEEEecccc
Q 002401 188 CICFELLDS 196 (927)
Q Consensus 188 ~LVmEy~~G 196 (927)
+.||++++|
T Consensus 101 f~v~~~veG 109 (321)
T COG3173 101 FYVMEWVEG 109 (321)
T ss_pred eEEEEEecc
Confidence 999999887
No 494
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=94.41 E-value=0.2 Score=56.91 Aligned_cols=141 Identities=20% Similarity=0.195 Sum_probs=78.5
Q ss_pred EeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEE--Eeecc--eeEEEE
Q 002401 116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY--FVCQR--HLCICF 191 (927)
Q Consensus 116 ~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~--f~~~~--~l~LVm 191 (927)
.|.+ .-..||++.... ++ +++|+.... ....+...|+..|..|...-...--| |..+=+- ..... +.+-|+
T Consensus 33 ~l~s-~eN~~f~~~~~~-g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf 107 (331)
T COG2334 33 GLNS-EENSNFRVQTED-GR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALF 107 (331)
T ss_pred cccc-ccCceEEEEecC-CC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEE
Confidence 3444 455788885543 33 389999876 55677788999999997642111122 2222111 11223 778888
Q ss_pred ecccchhHH------HH----------Hhh--ccC--------CCCHH----H---------HHHHHHHHHHHHhhhcc-
Q 002401 192 ELLDSNLYE------LI----------KIN--HFR--------GLSLS----I---------VQLFSKQILRGLSLLKD- 231 (927)
Q Consensus 192 Ey~~GsL~d------lL----------~~~--~~~--------~L~e~----~---------i~~i~~QIl~aL~yLHs- 231 (927)
+|++|.... .+ ... ... ...+. . -.....++...++.+.+
T Consensus 108 ~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~ 187 (331)
T COG2334 108 EYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLAR 187 (331)
T ss_pred EecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhh
Confidence 998864332 00 000 000 01111 0 00122344444444442
Q ss_pred -------CC--eeeccCCCCCEEEeecCCCC-eEEEeecCCcc
Q 002401 232 -------AG--IIHCDLKPENILLCTSVKPA-EIKIIDFGSAC 264 (927)
Q Consensus 232 -------~g--IVHrDLKPeNILL~~~~~~g-~IKL~DFGlA~ 264 (927)
.+ |||+|+.|.||+++ ... .+.++||+.++
T Consensus 188 ~~~~lp~~~~~iIH~D~~~~NVl~d---~~~~~~g~iDFdDa~ 227 (331)
T COG2334 188 LPAHLPALGDQIIHGDLHPDNVLFD---DDTDVSGFIDFDDAG 227 (331)
T ss_pred chhhCCcccceeeecCCCccceeEc---CCCCeeeEEEccccc
Confidence 24 99999999999995 333 58999999874
No 495
>PRK06148 hypothetical protein; Provisional
Probab=93.87 E-value=0.66 Score=60.32 Aligned_cols=80 Identities=10% Similarity=-0.024 Sum_probs=44.1
Q ss_pred EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEE-----EEee-cc--e
Q 002401 115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE-----YFVC-QR--H 186 (927)
Q Consensus 115 ~~LG~GsfG~Vyka~d~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~-----~f~~-~~--~ 186 (927)
+.|+ |..-.+|++.. .+++.+++|+.+... .......|.++|..|...-.....|.+++..+ .... .+ +
T Consensus 31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSE-PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred eecC-CcCCceEEEEe-CCCCeEEEEEcCCcc-chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 3453 34566777743 346679999998542 23344557778887764311122344443321 1111 22 5
Q ss_pred eEEEEecccch
Q 002401 187 LCICFELLDSN 197 (927)
Q Consensus 187 l~LVmEy~~Gs 197 (927)
++.+|+|++|.
T Consensus 108 ~vrLl~~l~G~ 118 (1013)
T PRK06148 108 LLRLLSWLPGT 118 (1013)
T ss_pred EEEEEeccCCC
Confidence 77889999873
No 496
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=93.75 E-value=0.65 Score=51.79 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=25.8
Q ss_pred CeeeccCCCCCEEEeecCCCCeEEEeecCCccc
Q 002401 233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (927)
Q Consensus 233 gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA~~ 265 (927)
++||+|+.+.|||++ .++.+.|+||..++.
T Consensus 197 ~lcHgD~~~~Nvl~~---~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYD---ETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEc---CCCCEEEEEhhhccc
Confidence 799999999999994 556789999998754
No 497
>PTZ00296 choline kinase; Provisional
Probab=93.34 E-value=0.56 Score=55.41 Aligned_cols=74 Identities=15% Similarity=0.056 Sum_probs=45.7
Q ss_pred EEEEeccCCceeEEEeeccC--------CCeEEEEEEEeCChhhHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeec
Q 002401 113 VKDLLGHGTFGQVAKCWDAE--------MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (927)
Q Consensus 113 i~~~LG~GsfG~Vyka~d~~--------tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~ 184 (927)
-++.|..|-.-.+|++.... .++.|++|+........-.-..|..+++.+... .-.| ++++.+.
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~---gi~P---~l~~~f~-- 180 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKY---RIAP---QLLNTFS-- 180 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHC---CCCC---ceEEEeC--
Confidence 55677778888899886432 246799999875443333445688888888653 1123 4455443
Q ss_pred ceeEEEEecccc
Q 002401 185 RHLCICFELLDS 196 (927)
Q Consensus 185 ~~l~LVmEy~~G 196 (927)
-..|.||++|
T Consensus 181 --gg~I~efi~g 190 (442)
T PTZ00296 181 --GGRIEEWLYG 190 (442)
T ss_pred --CCEEEEeeCC
Confidence 2346677764
No 498
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=92.72 E-value=0.43 Score=52.48 Aligned_cols=78 Identities=12% Similarity=-0.012 Sum_probs=44.7
Q ss_pred ccCCceeEEEeeccC----C----CeEEEEEEEeCCh------hhHHHHHHHHHHHHHHhhhcCCC------CCCceeEE
Q 002401 118 GHGTFGQVAKCWDAE----M----NSFVAVKIIKNQP------AYYQQALVEVSILTTLNKKYDRE------DKHHIVRI 177 (927)
Q Consensus 118 G~GsfG~Vyka~d~~----t----g~~VAIKiik~~~------~~~~~~~~Ei~iL~~L~~~~~~~------~HpnIVrl 177 (927)
|.|-.|.+|++.-.. + ...++||...... .....+.+|+.+.+.+...+... ....+.++
T Consensus 2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~ 81 (294)
T PF02958_consen 2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKC 81 (294)
T ss_pred CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceE
Confidence 566777777765422 1 2358888876322 12345778888777664332111 11234566
Q ss_pred EEEEeecceeEEEEeccc
Q 002401 178 YEYFVCQRHLCICFELLD 195 (927)
Q Consensus 178 ~~~f~~~~~l~LVmEy~~ 195 (927)
+.........+||||-+.
T Consensus 82 ~~~~~~~~~~~lvlEDL~ 99 (294)
T PF02958_consen 82 YYADEDPGDEVLVLEDLS 99 (294)
T ss_pred EEeccCCCceeeehhhhh
Confidence 655544456788988763
No 499
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=91.65 E-value=0.64 Score=50.05 Aligned_cols=114 Identities=14% Similarity=0.100 Sum_probs=69.7
Q ss_pred CCceeEEEeeccCCCeEEEEEEEeCChh--hHHHHHHHHHHHHHHhhhcCCCCCCceeEEEEEEeecceeEEEEecccch
Q 002401 120 GTFGQVAKCWDAEMNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSN 197 (927)
Q Consensus 120 GsfG~Vyka~d~~tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVrl~~~f~~~~~l~LVmEy~~Gs 197 (927)
++.++..+++.+- |. ..+|++..-+. ....+.++.+++.++. .|+++..- ..-.+-++.|.|..-
T Consensus 73 ~gNsTl~~~kt~i-G~-L~lKKi~slp~~~~~~~y~nky~v~Armh---------GilrL~ND--n~~~yGvIlE~Cy~~ 139 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-GP-LFLKKIRSLPCCINDALYFNKYRVFARMH---------GILRLKND--NNYKYGVILERCYKI 139 (308)
T ss_pred CCceEEEEecccc-ch-hhhhhccCCCcccchhhhhhhhhHHHHhh---------heeEeecC--CCceeEEEEeeccCc
Confidence 3334444443322 33 44555553221 2344567899998883 58888732 333577889988631
Q ss_pred hHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhcc--CCeeeccCCCCCEEEeecCCCCeEEEeecCCc
Q 002401 198 LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD--AGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (927)
Q Consensus 198 L~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLHs--~gIVHrDLKPeNILL~~~~~~g~IKL~DFGlA 263 (927)
-. .. ..++..=+.+|.-.|+ .+.+|+|..|+||+- ++.|.+||.|=++-
T Consensus 140 ~i----------~~----~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~---D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 140 KI----------NF----SNFITAGIKDLMDFHSENQHCLHGDCNPDNIMC---DKFGYLKLVDPVCL 190 (308)
T ss_pred cc----------ch----hHHHHHhHHHHHHhhccCCCeecCCCChhheee---cCCCCEEecChhhh
Confidence 00 00 1112222467777884 479999999999999 68899999997653
No 500
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=91.55 E-value=0.43 Score=55.31 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=41.5
Q ss_pred eEEEEecccc-hhHHHHHhhccCCCCHHHHHHHHHHHHHHHhhhc-cCCeeeccCCCCCEEEee
Q 002401 187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK-DAGIIHCDLKPENILLCT 248 (927)
Q Consensus 187 l~LVmEy~~G-sL~dlL~~~~~~~L~e~~i~~i~~QIl~aL~yLH-s~gIVHrDLKPeNILL~~ 248 (927)
.+||-+|..| .+..+++.. ..+++.+++++.-...||.-+- -.+++|.||.|.||++.-
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~---~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWK---SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred ceeeeeccccccHHhhhhcc---cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence 4566667766 666666544 3667677777776667665443 468999999999999953
Done!