Query 002402
Match_columns 927
No_of_seqs 402 out of 2060
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 00:56:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002402.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002402hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 1.8E-40 6.1E-45 365.9 24.6 253 82-363 20-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 2.7E-36 9.2E-41 332.7 27.3 260 84-372 8-305 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 1.3E-35 4.4E-40 327.2 26.2 250 81-363 19-308 (309)
4 4fai_A CG5976, isoform B; alph 100.0 1.5E-36 5.1E-41 337.7 18.5 251 86-363 37-321 (330)
5 3gux_A Putative Zn-dependent e 100.0 1.5E-34 5.2E-39 319.1 26.0 251 82-363 22-312 (314)
6 3pb6_X Glutaminyl-peptide cycl 100.0 3.7E-34 1.3E-38 317.7 21.9 266 69-364 17-327 (330)
7 2afw_A Glutaminyl-peptide cycl 100.0 2.4E-32 8.2E-37 303.6 22.9 268 67-364 9-326 (329)
8 1tkj_A Aminopeptidase, SGAP; d 100.0 3.6E-31 1.2E-35 288.1 27.8 255 82-371 2-282 (284)
9 3kas_A Transferrin receptor pr 100.0 3.1E-30 1.1E-34 307.8 17.7 208 161-373 264-490 (640)
10 1rtq_A Bacterial leucyl aminop 100.0 2.9E-29 1E-33 275.0 23.9 263 81-371 14-293 (299)
11 3fed_A Glutamate carboxypeptid 100.0 4.6E-29 1.6E-33 300.3 15.3 208 160-372 309-552 (707)
12 2ek8_A Aminopeptidase; metallo 100.0 2.2E-27 7.5E-32 272.1 26.2 198 163-373 203-408 (421)
13 3iib_A Peptidase M28; YP_92679 99.9 6.1E-27 2.1E-31 270.2 19.0 200 161-370 233-436 (444)
14 3k9t_A Putative peptidase; str 99.8 3.9E-20 1.3E-24 207.0 20.4 178 170-368 174-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 8.1E-16 2.8E-20 165.7 20.5 232 87-366 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 3E-16 1E-20 168.9 15.6 232 87-366 6-268 (268)
17 1vhe_A Aminopeptidase/glucanas 99.6 2.6E-14 8.9E-19 161.0 18.3 226 87-367 7-355 (373)
18 1q7l_A Aminoacylase-1; catalys 99.6 2.8E-14 9.5E-19 146.9 16.0 146 83-259 6-174 (198)
19 1y0y_A FRV operon protein FRVX 99.6 2.6E-14 8.8E-19 159.8 17.0 220 89-366 8-350 (353)
20 2wyr_A Cobalt-activated peptid 99.5 4.6E-14 1.6E-18 156.2 16.1 148 198-364 171-332 (332)
21 2gre_A Deblocking aminopeptida 99.5 5.8E-14 2E-18 156.8 16.2 224 84-362 3-343 (349)
22 2fvg_A Endoglucanase; TM1049, 99.5 2.5E-13 8.4E-18 151.1 13.7 218 92-366 3-335 (340)
23 3n5f_A L-carbamoylase, N-carba 99.4 1.8E-12 6E-17 147.3 17.3 129 84-247 2-142 (408)
24 2zog_A Cytosolic non-specific 99.4 1.1E-11 3.7E-16 143.5 19.8 156 86-263 19-201 (479)
25 1cg2_A Carboxypeptidase G2; me 99.3 1.1E-11 3.6E-16 140.1 16.4 146 86-264 18-181 (393)
26 3ct9_A Acetylornithine deacety 99.3 4.5E-11 1.6E-15 133.4 16.6 135 86-263 10-164 (356)
27 3ife_A Peptidase T; metallopep 99.2 2.6E-11 9E-16 138.9 13.7 138 87-262 27-224 (434)
28 3pfo_A Putative acetylornithin 99.2 5.3E-11 1.8E-15 135.9 16.0 158 87-264 26-205 (433)
29 2pok_A Peptidase, M20/M25/M40 99.2 4.5E-11 1.6E-15 138.7 15.2 146 86-263 42-211 (481)
30 3dlj_A Beta-Ala-His dipeptidas 99.2 2.1E-10 7.3E-15 133.3 19.2 156 86-263 24-208 (485)
31 2v8h_A Beta-alanine synthase; 99.2 7.7E-11 2.6E-15 136.8 15.3 128 83-246 28-175 (474)
32 3gb0_A Peptidase T; NP_980509. 99.2 6.8E-11 2.3E-15 132.3 14.2 149 83-264 2-168 (373)
33 1vho_A Endoglucanase; structur 99.2 3E-10 1E-14 126.2 17.7 224 88-367 6-337 (346)
34 1z2l_A Allantoate amidohydrola 99.2 9.7E-11 3.3E-15 133.4 13.9 126 86-246 8-145 (423)
35 2rb7_A Peptidase, M20/M25/M40 99.2 8.8E-11 3E-15 131.5 12.5 139 85-262 4-164 (364)
36 3tx8_A Succinyl-diaminopimelat 99.2 1.8E-10 6.3E-15 128.7 14.1 139 87-263 13-167 (369)
37 1ylo_A Hypothetical protein SF 99.1 4.2E-10 1.5E-14 124.9 16.4 218 91-366 7-338 (348)
38 3rza_A Tripeptidase; phosphory 99.1 2.8E-10 9.4E-15 128.7 12.8 153 81-264 18-189 (396)
39 1vgy_A Succinyl-diaminopimelat 99.1 3.4E-10 1.2E-14 127.8 13.1 141 86-263 5-168 (393)
40 1lfw_A PEPV; hydrolase, dipept 99.1 1.4E-09 4.7E-14 125.6 18.3 126 86-249 13-168 (470)
41 3kl9_A PEPA, glutamyl aminopep 99.1 1.4E-09 4.9E-14 121.8 16.9 225 87-365 3-345 (355)
42 1fno_A Peptidase T; metallo pe 99.1 3.1E-10 1E-14 129.1 11.4 137 88-263 3-198 (417)
43 3mru_A Aminoacyl-histidine dip 99.1 4.3E-10 1.5E-14 131.2 11.9 140 82-263 9-175 (490)
44 3isz_A Succinyl-diaminopimelat 99.0 1.3E-09 4.3E-14 121.6 14.3 139 87-262 3-164 (377)
45 3khx_A Putative dipeptidase sa 99.0 2.4E-09 8.3E-14 124.8 16.1 127 86-250 33-188 (492)
46 3pfe_A Succinyl-diaminopimelat 99.0 1.9E-09 6.5E-14 125.0 14.3 146 87-263 18-193 (472)
47 3cpx_A Aminopeptidase, M42 fam 99.0 4.1E-10 1.4E-14 124.4 8.2 224 88-363 18-320 (321)
48 1xmb_A IAA-amino acid hydrolas 99.0 4.8E-09 1.6E-13 119.6 17.2 134 87-261 28-176 (418)
49 2qyv_A XAA-His dipeptidase; YP 99.0 2.6E-09 8.8E-14 124.2 13.3 140 82-263 6-172 (487)
50 2f7v_A Aectylcitrulline deacet 98.9 3.8E-09 1.3E-13 118.3 12.3 130 86-263 8-160 (369)
51 1ysj_A Protein YXEP; M20 famil 98.9 9.7E-09 3.3E-13 116.5 15.6 137 86-260 31-181 (404)
52 2vpu_A TET3, 354AA long hypoth 98.9 2.7E-08 9.2E-13 111.4 16.3 220 88-366 10-349 (354)
53 3ram_A HMRA protein; two-domai 98.8 1.5E-08 5.2E-13 114.7 13.0 141 86-263 15-158 (394)
54 3isx_A Endoglucanase; TM1050, 98.6 4.5E-07 1.5E-11 101.1 16.4 213 89-361 13-341 (343)
55 3io1_A Aminobenzoyl-glutamate 98.6 3.5E-07 1.2E-11 105.2 15.5 159 86-261 13-209 (445)
56 2wzn_A TET3, 354AA long hypoth 98.1 3.6E-05 1.2E-09 82.2 16.3 56 307-367 294-350 (354)
57 3iib_A Peptidase M28; YP_92679 94.4 0.028 9.7E-07 64.5 5.1 41 84-125 18-59 (444)
58 2ijz_A Probable M18-family ami 91.0 0.32 1.1E-05 55.6 7.3 142 195-348 230-412 (428)
59 2glf_A Probable M18-family ami 89.9 0.34 1.2E-05 55.7 6.3 152 197-362 246-448 (450)
60 3fed_A Glutamate carboxypeptid 88.9 0.5 1.7E-05 57.3 7.0 42 82-125 20-61 (707)
61 3kas_A Transferrin receptor pr 82.8 0.4 1.4E-05 57.4 1.9 43 83-126 14-58 (640)
62 3vat_A Dnpep, aspartyl aminope 74.2 3.7 0.00013 47.6 6.3 160 196-365 281-487 (496)
63 2glj_A Probable M18-family ami 71.5 1.2 4.2E-05 51.2 1.5 45 196-244 257-301 (461)
64 1y7e_A Probable M18-family ami 67.3 0.87 3E-05 52.4 -0.9 45 197-244 252-296 (458)
65 2lx0_A Membrane fusion protein 42.1 24 0.00082 24.4 3.2 18 632-649 7-24 (32)
66 1q7l_B Aminoacylase-1; catalys 38.4 51 0.0018 28.2 5.8 60 305-368 22-82 (88)
67 2l8s_A Integrin alpha-1; trans 36.9 53 0.0018 26.5 5.0 36 623-660 5-40 (54)
68 2ijz_A Probable M18-family ami 28.5 31 0.0011 39.1 3.4 74 104-193 13-86 (428)
69 2glf_A Probable M18-family ami 25.1 90 0.0031 35.6 6.4 65 109-193 33-97 (450)
70 2knc_A Integrin alpha-IIB; tra 23.9 1.3E+02 0.0044 24.3 5.2 35 624-660 9-43 (54)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.8e-40 Score=365.89 Aligned_cols=253 Identities=20% Similarity=0.209 Sum_probs=198.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002402 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 161 (927)
Q Consensus 82 ~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 161 (927)
.+||++||+++|++|+++|||++||++++++++ ||+++|+++| .+++.|.|..... ...+.
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~-~i~~~l~~~g------~~v~~q~~~~~~~------------~~~~~ 80 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGN-YLAGKLEAFG------AKVTNQYADLIAY------------DGTLL 80 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEEEEEEECT------------TSCEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHH-HHHHHHHHcC------CeeEEEeEEeccC------------CCCcc
Confidence 479999999999999999999999999999999 9999999998 5777776654210 11224
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEEeecccccCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 002402 162 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF 228 (927)
Q Consensus 162 ~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s-------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvF 228 (927)
+..|||++++|+ .++.|+|+|||||++.+ +||+||+||||+|||+||.|++. +++++|+|
T Consensus 81 ~~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~ 153 (309)
T 4fuu_A 81 KARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred eeEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEE
Confidence 678999999985 45789999999998753 69999999999999999999974 68999999
Q ss_pred EEeCCCCCCc--------------cchHHHHhcCC-ccCCceEEEEeccCCCCCCccceecCCC---HHHHHHHHHHhcC
Q 002402 229 LFNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAIDLEAMGIGGKSGLFQAGPH---PWAVENFAAAAKY 290 (927)
Q Consensus 229 lf~~aEE~Gl--------------~GS~~fv~~h~-~~~~i~a~INLD~~G~gG~~~lfq~g~~---~~li~~y~~~a~~ 290 (927)
+||+|||.|+ +||+.|+++++ +..++.++||+||+|.+++....+.... +.+.+.+.+.++.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T 4fuu_A 154 IFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKK 233 (309)
T ss_dssp EEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHH
T ss_pred EeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHh
Confidence 9999999995 89999997764 4578999999999998877654442221 3344444443222
Q ss_pred CCCcchhhhhhccCCCCCCCchHHhhhcCCCeEEEEEeeC----CCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 002402 291 PSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTD----KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 363 (927)
Q Consensus 291 p~~~~l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~----~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~ 363 (927)
..... ....+.+. ...+||.+|.+.+|||++++++.. ..++|||+.||+|+||+++||++|+++++++.+
T Consensus 234 ~~~~~--~~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 234 AGYGK--TFIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp TTCTT--TEEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred cCCcc--cccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 11110 01112222 235799999876899999997643 245899999999999999999999999999864
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=2.7e-36 Score=332.70 Aligned_cols=260 Identities=18% Similarity=0.234 Sum_probs=195.5
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002402 84 FSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 163 (927)
Q Consensus 84 fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 163 (927)
-+.....+.|+.| ++||++||++++++++ ||.++|+++| +++++|.|...... ....+.
T Consensus 8 d~~~~~~~~l~~i--l~PR~~gs~~~~~~~~-~i~~~l~~~g------~~v~~~~f~~~~~~------------~~~~~~ 66 (312)
T 4f9u_A 8 DDEVHFNRTLDSI--LVPRVVGSRGHQQVRE-YLVQSLNGLG------FQTEVDEFKQRVPV------------FGELTF 66 (312)
T ss_dssp CCHHHHHHHHHHH--CSCCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEEEEEEEETT------------TEEEEE
T ss_pred CHHHHHHHHHHHh--cCCCCCCCHHHHHHHH-HHHHHHHHCC------CeEEEEeEEEecCC------------CCceeE
Confidence 4556666777777 4799999999999999 9999999998 67888877653210 012367
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEEeecccccC-----CCCCCCChhHHHHHHHHHHHHHhc-----CCCCCCcEEEEEeCC
Q 002402 164 NHIVLRIQPKYASEAAENAILVSSHIDTVFA-----AEGAGDCSSCVAVMLELARAMSQW-----AHGFKNAVIFLFNTG 233 (927)
Q Consensus 164 ~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~-----spGA~Dn~sGVA~mLElaR~L~~~-----~~~p~~~IvFlf~~a 233 (927)
.|||++++|+ +++.|+|+|||||++. .+||+|||||||+|||+||.|++. +.+|+++|+|+||+|
T Consensus 67 ~Nii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fda 141 (312)
T 4f9u_A 67 ANVVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDG 141 (312)
T ss_dssp EEEEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESC
T ss_pred EEEEEEECCC-----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecC
Confidence 8999999985 4678999999999853 589999999999999999999762 467999999999999
Q ss_pred CCCC--------ccchHHHHhcCCcc-------------CCceEEEEeccCCCCCCccceecCCCHH----HH---HHHH
Q 002402 234 EEEG--------LNGAHSFVTQHPWS-------------TTIRVAIDLEAMGIGGKSGLFQAGPHPW----AV---ENFA 285 (927)
Q Consensus 234 EE~G--------l~GS~~fv~~h~~~-------------~~i~a~INLD~~G~gG~~~lfq~g~~~~----li---~~y~ 285 (927)
||.| |+||++|+++|++. +++.++||+||+|..++..........+ +. +...
T Consensus 142 EE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 221 (312)
T 4f9u_A 142 EEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLR 221 (312)
T ss_dssp CSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHH
Confidence 9988 99999999886431 4789999999999877654211111122 11 1122
Q ss_pred HHhcCCCCcchhhhhhccCCCCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHh
Q 002402 286 AAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAA 365 (927)
Q Consensus 286 ~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la 365 (927)
+....+........ +..--...+||.+|.+ .|||+++++.....++|||+.||+|+||+++|+++++.+.+++.+..
T Consensus 222 ~~~~~~~~~~~~~~--~~~~~~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l 298 (312)
T 4f9u_A 222 TAGQLEGNNNMFLS--RVSGGLVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYL 298 (312)
T ss_dssp HTTCSSSSCCCEEE--EECSSCCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred Hhcccccccccccc--ccCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHH
Confidence 21111111110001 1111124689999998 89999999988777889999999999999999999999999999877
Q ss_pred cCCCCCC
Q 002402 366 SSTSLPK 372 (927)
Q Consensus 366 ~s~~l~~ 372 (927)
.....|-
T Consensus 299 ~~~~~P~ 305 (312)
T 4f9u_A 299 KRHTSPV 305 (312)
T ss_dssp HHCCSCC
T ss_pred hCCCCCC
Confidence 7666553
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=1.3e-35 Score=327.22 Aligned_cols=250 Identities=20% Similarity=0.236 Sum_probs=199.2
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccc
Q 002402 81 KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIY 160 (927)
Q Consensus 81 ~~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y 160 (927)
..+|+++|++++|++|+++++|..||+++.++++ ||.++++++| +++++|.|.... +.+ .+
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~-~l~~~l~~~G------~~v~~~~~~~~~---------~~g---~~ 79 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGD-YLASELKRFG------AKVYQQEAILTA---------YDG---TK 79 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEEEEEEEC---------TTS---CE
T ss_pred ccccCHHHHHHHHHHHHccCCCCCCCHHHHHHHH-HHHHHHHHCC------CeEEEEEeeccc---------cCC---Cc
Confidence 5689999999999999999999999999999999 9999999998 567777665321 001 13
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEEeecccccCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002402 161 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVI 227 (927)
Q Consensus 161 ~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s-------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~Iv 227 (927)
.+..|||++++|+ +++.|+++||||||+.+ +||+||++|||+|||++|.|++. +++++|+
T Consensus 80 ~~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~ 152 (309)
T 3tc8_A 80 LEARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGID 152 (309)
T ss_dssp EEEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEE
T ss_pred ccceEEEEEECCC-----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEE
Confidence 4578999999984 45799999999999866 79999999999999999999986 4899999
Q ss_pred EEEeCCCCCCc-------------cchHHHHhcCCc-cCCceEEEEeccCCCCCCccceecCC-C---HHHHHHHHHHhc
Q 002402 228 FLFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGP-H---PWAVENFAAAAK 289 (927)
Q Consensus 228 Flf~~aEE~Gl-------------~GS~~fv~~h~~-~~~i~a~INLD~~G~gG~~~lfq~g~-~---~~li~~y~~~a~ 289 (927)
|+|+++||.|+ +||++|+++++. ..+++++||+||+|.+++..... +. . +.+++.+.+.++
T Consensus 153 f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~ 231 (309)
T 3tc8_A 153 IIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAAR 231 (309)
T ss_dssp EEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHH
T ss_pred EEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHH
Confidence 99999999999 999999965543 36899999999999987653222 21 1 234555544332
Q ss_pred CCCCcchhhhhhcc---CCCCCCCchHHhhhcCCCeEEEEEee------CCCCCCCCCCCCcCCCCHhHHHHHHHHHHHH
Q 002402 290 YPSGQVTAQDLFAS---GAITSATDFQVYKEVAGLSGLDFAYT------DKSAVYHTKNDKLDLLKPGSLQHLGENMLAF 360 (927)
Q Consensus 290 ~p~~~~l~~e~f~~---g~ips~TD~~~F~~~~GIPgld~a~~------~~~~~YHT~~Dt~d~id~~slq~~g~~vl~l 360 (927)
. .+. ...|+. |. ..+||.+|.++.|||+++++.. ...++|||+.||+|+||+++|++++++++++
T Consensus 232 ~-~g~---~~~f~~~~~g~--~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~ 305 (309)
T 3tc8_A 232 D-LGY---GKYFINAAGGA--ITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEV 305 (309)
T ss_dssp H-HTC---TTTEEEEECCC--CCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHH
T ss_pred H-cCC---cceeccCCCCC--CCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHH
Confidence 1 111 122321 22 2689999998679999999865 3457899999999999999999999999999
Q ss_pred HHH
Q 002402 361 LLQ 363 (927)
Q Consensus 361 v~~ 363 (927)
+.+
T Consensus 306 vy~ 308 (309)
T 3tc8_A 306 IYN 308 (309)
T ss_dssp HHH
T ss_pred Hhc
Confidence 874
No 4
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=1.5e-36 Score=337.66 Aligned_cols=251 Identities=20% Similarity=0.257 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002402 86 EFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 165 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 165 (927)
.++..++|+.| ++||++||++++++++ ||.++|+++| ++++.|.|...... + ...+..|
T Consensus 37 ~~~~~~~l~~i--l~pR~~Gs~~~~~~~~-~i~~~l~~~g------~~v~~q~f~~~~~~----~--------~~~~~~N 95 (330)
T 4fai_A 37 KLHLREAIDKI--LIPRVVGTTNHSIVRE-YIVQSLRDLD------WDVEVNSFHDHAPI----K--------GKLHFHN 95 (330)
T ss_dssp HHHHHHHHHHH--CSCCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEEEEEEEETT----T--------EEEEEEE
T ss_pred HHHHHHHHHhh--cCCCCCCCHHHHHHHH-HHHHHHHHCC------CEEEEeeeeeecCC----C--------CceeEEE
Confidence 34444444444 5899999999999999 9999999998 67888877653210 0 1236789
Q ss_pred EEEEEcCCCCCcCCCCEEEEEeecccccC----CCCCCCChhHHHHHHHHHHHHHhc---CCCCCCcEEEEEeCCCCCCc
Q 002402 166 IVLRIQPKYASEAAENAILVSSHIDTVFA----AEGAGDCSSCVAVMLELARAMSQW---AHGFKNAVIFLFNTGEEEGL 238 (927)
Q Consensus 166 VIa~i~G~~~~~~~~~~VLl~AHyDSv~~----spGA~Dn~sGVA~mLElaR~L~~~---~~~p~~~IvFlf~~aEE~Gl 238 (927)
||++++|+ .++.|+|+|||||++. .+||+|||||||+|||+||.|++. +.+|+++|+|+||+|||.|+
T Consensus 96 ii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl 170 (330)
T 4fai_A 96 IIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFE 170 (330)
T ss_dssp EEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSS
T ss_pred EEEEECCC-----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccc
Confidence 99999885 5678999999999864 479999999999999999999763 46799999999999999985
Q ss_pred --------cchHHHHhcC---CccCCceEEEEeccCCCCCCccceecCCCHHHHHHHH----HHhc------CC---CCc
Q 002402 239 --------NGAHSFVTQH---PWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFA----AAAK------YP---SGQ 294 (927)
Q Consensus 239 --------~GS~~fv~~h---~~~~~i~a~INLD~~G~gG~~~lfq~g~~~~li~~y~----~~a~------~p---~~~ 294 (927)
+||++|++++ .+.+++.++||+||+|.+++..........+....+. +... .+ ...
T Consensus 171 ~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 4fai_A 171 EWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQ 250 (330)
T ss_dssp SCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC-----------
T ss_pred cccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhcccccc
Confidence 7999999763 2457899999999999987765333222222211111 1100 00 000
Q ss_pred chhhhhhccC---CCCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 002402 295 VTAQDLFASG---AITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 363 (927)
Q Consensus 295 ~l~~e~f~~g---~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~ 363 (927)
......|+.. -....+||.+|.+ .|||++++.....+++|||+.||+|+||+++++++++.+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 251 RDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp ----CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 0001111110 0113589999999 899999998777778999999999999999999999999888765
No 5
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=1.5e-34 Score=319.11 Aligned_cols=251 Identities=19% Similarity=0.272 Sum_probs=180.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002402 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 161 (927)
Q Consensus 82 ~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 161 (927)
.+|+++|++++|++|+++++|..||+++.++++ ||.++|+++| +++++|.+.... +.+ .+.
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~-~l~~~l~~~G------~~v~~~~~~~~~---------~~g---~~~ 82 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGE-YLAGQLEKFG------AKVYNQYADLIA---------YDG---TIL 82 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEEEEEEEC---------TTS---CEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHH-HHHHHHHHCC------CEEEEEEeeccc---------cCC---Ccc
Confidence 579999999999999999999999999999999 9999999998 567777655321 001 123
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEEeecccccCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 002402 162 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF 228 (927)
Q Consensus 162 ~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s-------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvF 228 (927)
+..|||++++|+ +++.|+++|||||++.+ +||.||++|||+|||++|.|++. +++++|+|
T Consensus 83 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~f 155 (314)
T 3gux_A 83 KSRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDI 155 (314)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEE
Confidence 568999999984 45789999999999865 79999999999999999999986 48999999
Q ss_pred EEeCCCCCCc--------------cchHHHHhcCCc-cCCceEEEEeccCCCCCCccceecCCC----HHHHHHHHHHhc
Q 002402 229 LFNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGPH----PWAVENFAAAAK 289 (927)
Q Consensus 229 lf~~aEE~Gl--------------~GS~~fv~~h~~-~~~i~a~INLD~~G~gG~~~lfq~g~~----~~li~~y~~~a~ 289 (927)
+++++||.|+ +||++|+++++. ..+++++||+||+|..++.. +..+.. +++++.+.+.++
T Consensus 156 v~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~~-~~~g~~~~~~~~l~~~~~~~~~ 234 (314)
T 3gux_A 156 VFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDATF-YYEGYSARTARSEMKKIWKKAH 234 (314)
T ss_dssp EEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCE-EECTTHHHHCHHHHHHHHHHHH
T ss_pred EEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCce-eeeccccccHHHHHHHHHHHHH
Confidence 9999999999 999999965544 37899999999999987763 554542 355666554432
Q ss_pred CCCCcchhhhhhccC-CCCCCCchHHhhhcCCCeEEEEEeeCC-------CCCCCCCCCCcCCCCHhHHHHHHHHHHHHH
Q 002402 290 YPSGQVTAQDLFASG-AITSATDFQVYKEVAGLSGLDFAYTDK-------SAVYHTKNDKLDLLKPGSLQHLGENMLAFL 361 (927)
Q Consensus 290 ~p~~~~l~~e~f~~g-~ips~TD~~~F~~~~GIPgld~a~~~~-------~~~YHT~~Dt~d~id~~slq~~g~~vl~lv 361 (927)
. .+. ...|+.. --...+||.+|.+..|||+++++.... .++|||+.||+|+||+++|++++++++.++
T Consensus 235 ~-~g~---~~~f~~~~~~~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~~ 310 (314)
T 3gux_A 235 E-LGY---GKYFVKEDGGETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDVI 310 (314)
T ss_dssp H-HTC---TTTEEEEECCCCCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHHH
T ss_pred H-cCC---ccccccccCCCCCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHHH
Confidence 1 111 1122210 012358999999867999999986531 378999999999999999999999999998
Q ss_pred HH
Q 002402 362 LQ 363 (927)
Q Consensus 362 ~~ 363 (927)
.+
T Consensus 311 y~ 312 (314)
T 3gux_A 311 YN 312 (314)
T ss_dssp HT
T ss_pred hh
Confidence 64
No 6
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=3.7e-34 Score=317.70 Aligned_cols=266 Identities=20% Similarity=0.227 Sum_probs=199.5
Q ss_pred cCCC--CCCccccC--CCCCCHHHHHH-HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccC
Q 002402 69 HMPP--PLTADQAG--KRGFSEFEAIK-HVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKS 143 (927)
Q Consensus 69 ~lP~--~~~~~~~~--~~~fs~~rA~~-~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~ 143 (927)
+.|. +++.++.. +++|+.+|+++ +|+.| +++|.+||++++++++ ||.+++++++. +.++++|.|....
T Consensus 17 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~~--~~~R~~gS~~~~~a~~-~l~~~l~~~~~----g~~v~~d~f~~~~ 89 (330)
T 3pb6_X 17 RVPLIGSLPEARLRRVVGQLDPQRLWSTYLRPL--LVVRTPGSPGNLQVRK-FLEATLRSLTA----GWHVELDPFTAST 89 (330)
T ss_dssp -CCCTTCCCHHHHHHHHHTCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHH-HHHHHHHHSTT----CCEEEEEEEEEEE
T ss_pred cCCCcCCCCHHHHHhhcccCCHHHHHHHHHHHH--hCCCCCCCHHHHHHHH-HHHHHHHHhCC----CCeEEEEeeeccc
Confidence 4554 55444332 35799999998 78888 7899999999999999 99999999951 2678877765421
Q ss_pred CcccccccccccccccccccceEEEEEcCCCCCcCCCCEEEEEeecccccC------CCCCCCChhHHHHHHHHHHHHHh
Q 002402 144 GANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA------AEGAGDCSSCVAVMLELARAMSQ 217 (927)
Q Consensus 144 g~~~~~g~~~~~~~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~------spGA~Dn~sGVA~mLElaR~L~~ 217 (927)
. . .+.+..|||++++|+ .++.|+++|||||++. .+||+||++|||+|||+||.|++
T Consensus 90 ~---------~----g~~~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~ 151 (330)
T 3pb6_X 90 P---------L----GPVDFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDL 151 (330)
T ss_dssp T---------T----EEEEEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHH
T ss_pred c---------c----CCccceEEEEEECCC-----CCceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHH
Confidence 0 0 124678999999985 3578999999999863 38999999999999999999987
Q ss_pred c-----CCCCCCcEEEEEeCCCCC--------CccchHHHHhcCC---------ccCCceEEEEeccCCCCCCccceecC
Q 002402 218 W-----AHGFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP---------WSTTIRVAIDLEAMGIGGKSGLFQAG 275 (927)
Q Consensus 218 ~-----~~~p~~~IvFlf~~aEE~--------Gl~GS~~fv~~h~---------~~~~i~a~INLD~~G~gG~~~lfq~g 275 (927)
. +.+++++|+|+|++|||. |++||++|++++. ..++|+++||+||+|..++......+
T Consensus 152 ~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~ 231 (330)
T 3pb6_X 152 ELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFP 231 (330)
T ss_dssp HHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCG
T ss_pred HHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecC
Confidence 3 357999999999999999 9999999987531 35799999999999998776421111
Q ss_pred CCHHHHHHHHH---Hh-------cCCCCcchhhhhhcc--CCCCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcC
Q 002402 276 PHPWAVENFAA---AA-------KYPSGQVTAQDLFAS--GAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLD 343 (927)
Q Consensus 276 ~~~~li~~y~~---~a-------~~p~~~~l~~e~f~~--g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d 343 (927)
...++.+.+.+ .. .+|... ..|+. ..-...+||.+|.+ .|||++++......+.|||+.||+|
T Consensus 232 ~t~~~~~~l~~i~~~~~~~g~~~~~p~~~----~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d 306 (330)
T 3pb6_X 232 RTVRWFHRLRSIEKRLHRLNLLQSHPQEV----MYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEV 306 (330)
T ss_dssp GGHHHHHHHHHHHHHHHHTTCCSSCCSSC----SSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGG
T ss_pred cchHHHHHHHHHHHHHHHcCccccCCccc----ccccccccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchh
Confidence 12232222221 11 112111 12210 01124699999999 9999999987666679999999999
Q ss_pred CCCHhHHHHHHHHHHHHHHHH
Q 002402 344 LLKPGSLQHLGENMLAFLLQA 364 (927)
Q Consensus 344 ~id~~slq~~g~~vl~lv~~l 364 (927)
+||.++++++++.+..++.+.
T Consensus 307 ~id~~~l~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 307 NLHPPTVHNLCRILAVFLAEY 327 (330)
T ss_dssp GSCHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988764
No 7
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=100.00 E-value=2.4e-32 Score=303.63 Aligned_cols=268 Identities=21% Similarity=0.273 Sum_probs=199.8
Q ss_pred cccCCCCCCccccC--CCCCCHHHH-HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHh--hccccCCceeEEEEEEec
Q 002402 67 YEHMPPPLTADQAG--KRGFSEFEA-IKHVKALTELGPHPVGSDALDRALQVYVFAAAQK--IKETKHWEVDVEVDFFHA 141 (927)
Q Consensus 67 ~~~lP~~~~~~~~~--~~~fs~~rA-~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~--ig~~~~~~~~vevd~f~~ 141 (927)
.+++|.+++.++.+ +.+++.+|+ .++|++| +++|.++|++++++++ ||.+++++ .| +++++|.+..
T Consensus 9 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~~~r~~~s~~~~~~~~-~l~~~l~~~~~G------~~v~~~~~~~ 79 (329)
T 2afw_A 9 NYHQPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQ-HIMQRIQRLQAD------WVLEIDTFLS 79 (329)
T ss_dssp HHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHH-HHHHHHHTSSSC------CEEEEEEEEE
T ss_pred cccCCCCCChHHHHHhhhhcCHHHHHHHHHHHH--cCCCCCCCHHHHHHHH-HHHHHHHhhCCC------CEEEEEEEEe
Confidence 35578887754433 356999999 8999999 6899999999999999 99999999 55 6777776654
Q ss_pred cCCcccccccccccccccccccceEEEEEcCCCCCcCCCCEEEEEeecccccCC-------CCCCCChhHHHHHHHHHHH
Q 002402 142 KSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------EGAGDCSSCVAVMLELARA 214 (927)
Q Consensus 142 ~~g~~~~~g~~~~~~~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s-------pGA~Dn~sGVA~mLElaR~ 214 (927)
... .| +.+..|||++++|+ +++.|+++|||||++.+ +||+||++|||+|||++|.
T Consensus 80 ~~~----~g---------~~~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~ 141 (329)
T 2afw_A 80 QTP----YG---------YRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARA 141 (329)
T ss_dssp CCT----TS---------SEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHH
T ss_pred cCC----CC---------CceEeEEEEEECCC-----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHH
Confidence 210 01 13578999999874 56789999999999865 8999999999999999999
Q ss_pred HHhc--------CCCCCCcEEEEEeCCCCC--------CccchHHHHhcCC------------ccCCceEEEEeccCCCC
Q 002402 215 MSQW--------AHGFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAIDLEAMGIG 266 (927)
Q Consensus 215 L~~~--------~~~p~~~IvFlf~~aEE~--------Gl~GS~~fv~~h~------------~~~~i~a~INLD~~G~g 266 (927)
|++. +.+++++|+|+|+++||. |+.||+.|++++. ..+++.++||+|++|.+
T Consensus 142 l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~ 221 (329)
T 2afw_A 142 LDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAP 221 (329)
T ss_dssp THHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSS
T ss_pred HHHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCC
Confidence 9875 347899999999999998 9999999997641 14679999999999987
Q ss_pred CCccc--eecCCCHHHHH---HHHHHhcCC---CCcchhhhhhccCCC--CCCCchHHhhhcCCCeEEEEEeeCCCCCCC
Q 002402 267 GKSGL--FQAGPHPWAVE---NFAAAAKYP---SGQVTAQDLFASGAI--TSATDFQVYKEVAGLSGLDFAYTDKSAVYH 336 (927)
Q Consensus 267 G~~~l--fq~g~~~~li~---~y~~~a~~p---~~~~l~~e~f~~g~i--ps~TD~~~F~~~~GIPgld~a~~~~~~~YH 336 (927)
++... +.. ..+ +.+ ...+..... .........|..... ...+||.+|.+ .|||++++......+.||
T Consensus 222 ~~~~~~~~~~-~~~-~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yH 298 (329)
T 2afw_A 222 NPTFPNFFPN-SAR-WFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWH 298 (329)
T ss_dssp SCCBCCCCGG-GHH-HHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTT
T ss_pred CCceeeeccC-cch-HHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCC
Confidence 66532 221 112 222 111211100 000111112321111 23699999999 799999998876678999
Q ss_pred CCCCCcCCCCHhHHHHHHHHHHHHHHHH
Q 002402 337 TKNDKLDLLKPGSLQHLGENMLAFLLQA 364 (927)
Q Consensus 337 T~~Dt~d~id~~slq~~g~~vl~lv~~l 364 (927)
|++||++++|+++++++++.+..++.+.
T Consensus 299 t~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 299 TMDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp STTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887764
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.98 E-value=3.6e-31 Score=288.15 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=199.5
Q ss_pred CCCCHHHHHHHHHHHHhc-----CCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccc
Q 002402 82 RGFSEFEAIKHVKALTEL-----GPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGR 156 (927)
Q Consensus 82 ~~fs~~rA~~~L~~L~~i-----gpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~ 156 (927)
.+++.++++++|++|+++ ++|..|+++++++++ ||.++++++| ++++++.+...
T Consensus 2 ~~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~-~i~~~l~~~g------~~v~~~~~~~~-------------- 60 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVD-YVKAKLDAAG------YTTTLQQFTSG-------------- 60 (284)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHH-HHHHHHHHHT------CEEEEEEEEET--------------
T ss_pred CcCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHH-HHHHHHHHcC------CeEEEEEeccC--------------
Confidence 367899999999999875 468889999889999 9999999998 56666643321
Q ss_pred cccccccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC
Q 002402 157 TLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEE 236 (927)
Q Consensus 157 ~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~ 236 (927)
.....||+++++|+ .+++.|+++||+|+++.++||.||++|+|+|||++|.|++.+.+++++|+|+|+++||.
T Consensus 61 ---~~~~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~ 133 (284)
T 1tkj_A 61 ---GATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEEL 133 (284)
T ss_dssp ---TEEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred ---CCCceeEEEEEeCC----CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCccc
Confidence 01357999999874 24578999999999999999999999999999999999987778999999999999999
Q ss_pred CccchHHHHhcCCc--cCCceEEEEeccCCCCCCccceecCCCHHHHHHHHHHhcCCCCcchhhhhhccCCCCCCCchHH
Q 002402 237 GLNGAHSFVTQHPW--STTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQV 314 (927)
Q Consensus 237 Gl~GS~~fv~~h~~--~~~i~a~INLD~~G~gG~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~ 314 (927)
|+.||+.|+++++. .+++.++||+|+.|.++....+. +.++.+.+.+.+.+++ .+.. ..... .-..+|||.+
T Consensus 134 g~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~-~gi~--~~~~~--~~~~~sD~~~ 207 (284)
T 1tkj_A 134 GLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAG-LNVP--TEIET--EGDGRSDHAP 207 (284)
T ss_dssp TSHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHH-HTCC--CEECC--SSTTCSTHHH
T ss_pred CCcCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHHHHHHH-cCCC--cccCC--CCCCCCchHH
Confidence 99999999988874 37899999999999876544333 3456555554443221 0100 00111 1135799999
Q ss_pred hhhcCCCeEEEEEeeC-------------------CCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCCCCC
Q 002402 315 YKEVAGLSGLDFAYTD-------------------KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLP 371 (927)
Q Consensus 315 F~~~~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~s~~l~ 371 (927)
|.+ .|||++.+.... ..++|||+.||++++|.+.++++++.+..+++.|++++.+|
T Consensus 208 f~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 208 FKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp HHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHH-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 998 999999987641 14689999999999999999999999999999999998876
No 9
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.97 E-value=3.1e-30 Score=307.75 Aligned_cols=208 Identities=17% Similarity=0.169 Sum_probs=176.0
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEEeCCCCC
Q 002402 161 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQW----AHGFKNAVIFLFNTGEEE 236 (927)
Q Consensus 161 ~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~----~~~p~~~IvFlf~~aEE~ 236 (927)
.+..|||++|+|+ +.++++|+++||+||| ++||+||++|+|+|||++|.|++. +++|+|+|+|++|+|||.
T Consensus 264 ~~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~--~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~ 338 (640)
T 3kas_A 264 IKILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF 338 (640)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG
T ss_pred eeEEEEEEEEeCC---cCCCCceeeecccCCC--CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCccc
Confidence 3678999999996 2467899999999999 589999999999999999999874 678999999999999999
Q ss_pred CccchHHHHhcCC-c-cCCceEEEEeccCCCCCCccceecCCC-HHHHHHHHHHhcCCCCc-chhhh-hhc--cCCCCCC
Q 002402 237 GLNGAHSFVTQHP-W-STTIRVAIDLEAMGIGGKSGLFQAGPH-PWAVENFAAAAKYPSGQ-VTAQD-LFA--SGAITSA 309 (927)
Q Consensus 237 Gl~GS~~fv~~h~-~-~~~i~a~INLD~~G~gG~~~lfq~g~~-~~li~~y~~~a~~p~~~-~l~~e-~f~--~g~ips~ 309 (927)
|+.||+.|+++|. + .+++.++||+|++|.|++...++++|. .++++.+.+.+++|.+. ++.++ .|. .+.++++
T Consensus 339 gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~ 418 (640)
T 3kas_A 339 GSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLD 418 (640)
T ss_dssp TSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTT
T ss_pred CchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCC
Confidence 9999999999883 3 589999999999999877777776553 56777777777888763 44432 333 4678999
Q ss_pred CchHHhhhcCCCeEEEEEeeCC-CC-CCCCCCCCcCCCCH------hHHHHHHHHHHHHHHHHhcCCCCCCC
Q 002402 310 TDFQVYKEVAGLSGLDFAYTDK-SA-VYHTKNDKLDLLKP------GSLQHLGENMLAFLLQAASSTSLPKG 373 (927)
Q Consensus 310 TD~~~F~~~~GIPgld~a~~~~-~~-~YHT~~Dt~d~id~------~slq~~g~~vl~lv~~la~s~~l~~~ 373 (927)
|||.+|.++.|||+++++|..+ .+ +|||.+||++++++ ..++.+++.+..++.+|++++.+|-+
T Consensus 419 sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~ 490 (640)
T 3kas_A 419 NAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLD 490 (640)
T ss_dssp STHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCC
T ss_pred cchHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999889999999999865 33 59999999998775 46788899999999999999999864
No 10
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.97 E-value=2.9e-29 Score=274.96 Aligned_cols=263 Identities=17% Similarity=0.217 Sum_probs=197.5
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccc
Q 002402 81 KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIY 160 (927)
Q Consensus 81 ~~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y 160 (927)
..+++.++++++|++|+++++|..+|+++.++++ ||.++++++|... + .++++.+... +
T Consensus 14 ~~~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~-~l~~~l~~~g~~~--~-~~~~~~~~~~-------~---------- 72 (299)
T 1rtq_A 14 LPQVDASQITGTISSLESFTNRFYTTTSGAQASD-WIASEWQALSASL--P-NASVKQVSHS-------G---------- 72 (299)
T ss_dssp GGGCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHH-HHHHHHHHHHTTS--T-TEEEEEEEET-------T----------
T ss_pred HHhcCHHHHHHHHHHHhCcCCCCCCCchHHHHHH-HHHHHHHHhcCCc--c-cceeeeeccC-------C----------
Confidence 3578999999999999999999999999889999 9999999997321 1 2455533210 0
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEEeeccccc--------CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 002402 161 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVF--------AAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNT 232 (927)
Q Consensus 161 ~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~--------~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~ 232 (927)
.+..||+++++|+ ..+++.|+++||+||++ .++||.||++|||+|||++|.|++.+.+++++|+|+|++
T Consensus 73 ~~~~nvi~~~~g~---~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~ 149 (299)
T 1rtq_A 73 YNQKSVVMTITGS---EAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYA 149 (299)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEES
T ss_pred CCCceEEEEEECC---CCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEEC
Confidence 2457999999885 12457899999999986 269999999999999999999998777899999999999
Q ss_pred CCCCCccchHHHHhcCCc-cCCceEEEEeccCCCCCC--ccceecC-CCHHHHHHHHHHhcCCCCcchhhhhhccCCCCC
Q 002402 233 GEEEGLNGAHSFVTQHPW-STTIRVAIDLEAMGIGGK--SGLFQAG-PHPWAVENFAAAAKYPSGQVTAQDLFASGAITS 308 (927)
Q Consensus 233 aEE~Gl~GS~~fv~~h~~-~~~i~a~INLD~~G~gG~--~~lfq~g-~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips 308 (927)
+||.|+.||+.|+++++. .+++.++||+|++|..|. .+.+... .++.+.+...+.++. ....+... +.. ....
T Consensus 150 ~EE~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~-~~~~i~~~-~~~-~~~~ 226 (299)
T 1rtq_A 150 AEEVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDE-YLPSLTYG-FDT-CGYA 226 (299)
T ss_dssp CGGGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHH-HCTTCCEE-EEC-CSSC
T ss_pred CccCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHH-hCccCCcc-cCC-CCCC
Confidence 999999999999987754 467899999999987543 2333322 245443333222111 00000011 111 1125
Q ss_pred CCchHHhhhcCCCeEEEEEe---eCCCCCCCCCCCCcCCCCH--hHHHHHHHHHHHHHHHHhcCCCCC
Q 002402 309 ATDFQVYKEVAGLSGLDFAY---TDKSAVYHTKNDKLDLLKP--GSLQHLGENMLAFLLQAASSTSLP 371 (927)
Q Consensus 309 ~TD~~~F~~~~GIPgld~a~---~~~~~~YHT~~Dt~d~id~--~slq~~g~~vl~lv~~la~s~~l~ 371 (927)
+|||.+|.+ .|||++.+.. .+...+|||+.||++++|+ ..++++++.+.+++.+|++++.+.
T Consensus 227 ~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 227 CSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDT 293 (299)
T ss_dssp CSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CCcHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 799999998 9999987642 2244789999999999998 588999999999999999988754
No 11
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.96 E-value=4.6e-29 Score=300.33 Aligned_cols=208 Identities=20% Similarity=0.254 Sum_probs=175.2
Q ss_pred ccccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCC
Q 002402 160 YSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQ---WAHGFKNAVIFLFNTGEEE 236 (927)
Q Consensus 160 y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~---~~~~p~~~IvFlf~~aEE~ 236 (927)
...+.|||++++|+ +.+++.|+++||+|||+ +||.||++|||+|||++|.|.+ .+++|+|+|+|++|+|||.
T Consensus 309 ~~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~ 383 (707)
T 3fed_A 309 ITRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF 383 (707)
T ss_dssp EEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred EEEEEEEEEEEeCC---CCCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccc
Confidence 35688999999996 24678999999999997 7999999999999999999987 4678999999999999999
Q ss_pred CccchHHHHhcCC--ccCCceEEEEeccCCCCCCccceecCC-CHHHHHHHHHHhcCCCC----cchhhhhhcc------
Q 002402 237 GLNGAHSFVTQHP--WSTTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSG----QVTAQDLFAS------ 303 (927)
Q Consensus 237 Gl~GS~~fv~~h~--~~~~i~a~INLD~~G~gG~~~lfq~g~-~~~li~~y~~~a~~p~~----~~l~~e~f~~------ 303 (927)
|+.||+.|+++|+ +.+++.++||+|++|.|+....++++| ..++++.+.+.+++|.+ .++.+.+++.
T Consensus 384 Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 384 GLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp TSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred cchhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccc
Confidence 9999999999886 568999999999999987777777665 36777878777889976 4565555531
Q ss_pred ------CCCCCCCchHHhhhcCCCeEEEEEeeCC-------C-CCCCCCCCCcCCCCH------hHHHHHHHHHHHHHHH
Q 002402 304 ------GAITSATDFQVYKEVAGLSGLDFAYTDK-------S-AVYHTKNDKLDLLKP------GSLQHLGENMLAFLLQ 363 (927)
Q Consensus 304 ------g~ips~TD~~~F~~~~GIPgld~a~~~~-------~-~~YHT~~Dt~d~id~------~slq~~g~~vl~lv~~ 363 (927)
+.+.++|||.+|.++.|||+++++|..+ . +.|||.+||++++++ ...+.+++....++.+
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~ 543 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYE 543 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 2345889999999989999999999854 3 379999999997654 4566688999999999
Q ss_pred HhcCCCCCC
Q 002402 364 AASSTSLPK 372 (927)
Q Consensus 364 la~s~~l~~ 372 (927)
||+++.+|-
T Consensus 544 La~~~vlP~ 552 (707)
T 3fed_A 544 LVDSKIIPF 552 (707)
T ss_dssp HHHCSSCCC
T ss_pred HhCCccCCC
Confidence 999998874
No 12
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.95 E-value=2.2e-27 Score=272.06 Aligned_cols=198 Identities=23% Similarity=0.274 Sum_probs=155.4
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchH
Q 002402 163 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAH 242 (927)
Q Consensus 163 ~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~ 242 (927)
..|||++++|+.....+++.|+++||+|||+.++||.||++|||+|||++|.|++. +++++|+|++|++||.|+.||+
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~ 280 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSK 280 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHH
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHH
Confidence 57999999985210126789999999999999999999999999999999999873 5789999999999999999999
Q ss_pred HHHhcCC--ccCCceEEEEeccCCCCCC-ccceecCC-CHHHHHHH----HHHhcCCCCcchhhhhhccCCCCCCCchHH
Q 002402 243 SFVTQHP--WSTTIRVAIDLEAMGIGGK-SGLFQAGP-HPWAVENF----AAAAKYPSGQVTAQDLFASGAITSATDFQV 314 (927)
Q Consensus 243 ~fv~~h~--~~~~i~a~INLD~~G~gG~-~~lfq~g~-~~~li~~y----~~~a~~p~~~~l~~e~f~~g~ips~TD~~~ 314 (927)
.|+++++ +.+++.++||+|++|.++. ...+..+. .+.+...+ .+....| . . . .....|||.+
T Consensus 281 ~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~----~-~~~~~SD~~~ 350 (421)
T 2ek8_A 281 KYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L---P----Y-GQEGRSDHES 350 (421)
T ss_dssp HHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C---C----E-EECCSSTHHH
T ss_pred HHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C---C----C-CCCCCCccHH
Confidence 9998875 3578999999999998765 22222222 11222222 1111122 0 0 0 1235799999
Q ss_pred hhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCCCCCCC
Q 002402 315 YKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKG 373 (927)
Q Consensus 315 F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~s~~l~~~ 373 (927)
|.+ .|||++.+......++|||++||+++++.+.++++++.+..++..|++.+.+|-+
T Consensus 351 F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 351 FHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIE 408 (421)
T ss_dssp HHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 998 9999998775555578999999999999999999999999999999999988753
No 13
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.94 E-value=6.1e-27 Score=270.16 Aligned_cols=200 Identities=18% Similarity=0.189 Sum_probs=159.6
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccc
Q 002402 161 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNG 240 (927)
Q Consensus 161 ~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~G 240 (927)
.+..||+++++|+ +.+++.|+++||+|||+.++||+||++|+|+|||++|.|++.+.+|+++|+|+||++||.|+.|
T Consensus 233 ~~~~Nvi~~~~g~---~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~G 309 (444)
T 3iib_A 233 TTSYNVIAEVKGS---TKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLG 309 (444)
T ss_dssp EEEEEEEEEECCS---TEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHH
T ss_pred ceeEEEEEEEeCC---CCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcC
Confidence 3678999999986 2357899999999999989999999999999999999999887789999999999999999999
Q ss_pred hHHHHhcCCc-cCCceEEEEeccCCCCCCccceecCC-CHHHHHHHHHHhcCCCCcchhhhhhccCCCCCCCchHHhhhc
Q 002402 241 AHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEV 318 (927)
Q Consensus 241 S~~fv~~h~~-~~~i~a~INLD~~G~gG~~~lfq~g~-~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~ 318 (927)
|+.|+++|+. .+++.++||+|+.|.....+.++.++ ...+++.+.+.. .+.+... ......++|||.+|.+
T Consensus 310 s~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~-----~~~~~~~~SD~~~f~~- 382 (444)
T 3iib_A 310 GKTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA-----GNNKASGGPDVSMLPA- 382 (444)
T ss_dssp HHHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE-----CCSCCCCCGGGTTSGG-
T ss_pred HHHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc-----ccCCCCCCCccHHHHH-
Confidence 9999998854 36799999999876332222233222 245556555432 2222211 1123456899999998
Q ss_pred CCCeEEEEEeeCC--CCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCCCC
Q 002402 319 AGLSGLDFAYTDK--SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSL 370 (927)
Q Consensus 319 ~GIPgld~a~~~~--~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~s~~l 370 (927)
.|||++++..... ..+|||+.||+|++|++.|++.++.+..++..+|++++.
T Consensus 383 ~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 383 LGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp GTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 8999999976432 358999999999999999999999999999999998764
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.84 E-value=3.9e-20 Score=207.04 Aligned_cols=178 Identities=17% Similarity=0.179 Sum_probs=136.1
Q ss_pred EcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCC
Q 002402 170 IQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHP 249 (927)
Q Consensus 170 i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~ 249 (927)
|+|+ .++.|+++||+||.. +|+||+||+|+++|+||+|++ .+++++++|+|++ |..||..|+.+|+
T Consensus 174 ipG~-----t~~~IllsaH~cHP~---~ANDNaSG~a~lleLar~l~~--~~~~~t~rFvf~p----g~iGS~~yl~~~~ 239 (435)
T 3k9t_A 174 IRGE-----LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSK--LKTKYSYRFLFAP----ETIGSITWLSRNE 239 (435)
T ss_dssp ECCS-----SSCEEEEEEECCCCS---CTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEEC----TTHHHHHHHHHCG
T ss_pred ecCC-----CCCEEEEEEEcCCCC---CCCccchHHHHHHHHHHHHhc--CCCCceEEEEEcC----ccHHHHHHHHhCh
Confidence 5774 468999999999853 699999999999999999986 4689999999998 6899999999886
Q ss_pred c-cCCceEEEEeccCCCCCCccceecCC-CHHHHHHHHH-HhcCCCCcchhhhhhccCCCCCCCchHHhhhcCC--CeEE
Q 002402 250 W-STTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAA-AAKYPSGQVTAQDLFASGAITSATDFQVYKEVAG--LSGL 324 (927)
Q Consensus 250 ~-~~~i~a~INLD~~G~gG~~~lfq~g~-~~~li~~y~~-~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~G--IPgl 324 (927)
. .+++++.+|+||+|.++... +..+. .+.+++...+ +.++.....-.. ...|.++||++|.+ .| ||..
T Consensus 240 ~~l~~i~a~lnLDmVGd~~~~~-y~~sr~g~~~~d~~~~~vl~~~~~~~~~~-----~f~~~GSDh~qF~s-pG~dIPv~ 312 (435)
T 3k9t_A 240 DKLKNIKMGLVATCVGDAGIKN-YKRTKFGDAEIDKIVEKVLMHCGSEYYVA-----DFFPWGSDERQFSS-PGINLSVG 312 (435)
T ss_dssp GGGGGEEEEEECCSCCSSSCEE-EECCTTSSSHHHHHHHHHHHHSSSCEEEE-----CCCSCSSTHHHHTS-TTTCCCEE
T ss_pred HhhhceEEEEEEEEecCCCCce-eecCCCCChHHHHHHHHHHhhcCCCCcee-----cCCCCCCcchhHhh-CCCCCCEE
Confidence 4 47999999999999876533 33222 2334333322 222210000001 12346799999998 88 9999
Q ss_pred EEEeeCC-CCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCC
Q 002402 325 DFAYTDK-SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASST 368 (927)
Q Consensus 325 d~a~~~~-~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~s~ 368 (927)
.+.-... .+.|||+.||++.|+++.|+...+.++..+..|-+..
T Consensus 313 ~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 313 SLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp EEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 9875322 5689999999999999999999999999999998754
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.69 E-value=8.1e-16 Score=165.72 Aligned_cols=232 Identities=17% Similarity=0.142 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 166 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 166 (927)
+++.+.+++|.++ +..|..+..+.+ ||.++|+++| ++++.+. . ....|+
T Consensus 6 ~~~~~~l~~lv~i---ps~s~~e~~~~~-~l~~~l~~~G------~~~~~~~--~-------------------~~~~nv 54 (269)
T 4h2k_A 6 EKVVSLAQDLIRR---PSISPNDEGCQQ-IIAERLEKLG------FQIEWMP--F-------------------NDTLNL 54 (269)
T ss_dssp HHHHHHHHHHHTS---CCBTTCCTTHHH-HHHHHHHTTT------CEEEECC--B-------------------TTBCEE
T ss_pred HHHHHHHHHHhCC---CCCCCCcHHHHH-HHHHHHHHcC------CeEEEEE--c-------------------CCceEE
Confidence 4678888888874 444544556788 9999999998 4554321 0 134699
Q ss_pred EEEEcCCCCCcCCCCEEEEEeecccccCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002402 167 VLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAHGFKNA 225 (927)
Q Consensus 167 Ia~i~G~~~~~~~~~~VLl~AHyDSv~~s---------------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~ 225 (927)
++++ |+ +.+.|++.+|+|+||.+ +|+.||.+|++++|+++|.|.+.+.+++++
T Consensus 55 ~a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~ 128 (269)
T 4h2k_A 55 WAKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGT 128 (269)
T ss_dssp EEEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSE
T ss_pred EEEe-CC-----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 9998 53 35689999999999853 599999999999999999998876678899
Q ss_pred EEEEEeCCCCCCcc-chHHHHhcCCc-cCCceEEEEeccCCCC--CCcc-ceecC----C-CHHHHHHHHHHhcCCCCcc
Q 002402 226 VIFLFNTGEEEGLN-GAHSFVTQHPW-STTIRVAIDLEAMGIG--GKSG-LFQAG----P-HPWAVENFAAAAKYPSGQV 295 (927)
Q Consensus 226 IvFlf~~aEE~Gl~-GS~~fv~~h~~-~~~i~a~INLD~~G~g--G~~~-lfq~g----~-~~~li~~y~~~a~~p~~~~ 295 (927)
|+|+|+.+||.|.. ||+.+++.+.. ..+..++|+.|..+.. |..+ .-+.| + +..+++...++++.-.+-.
T Consensus 129 i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~gi~ 208 (269)
T 4h2k_A 129 IALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIGIT 208 (269)
T ss_dssp EEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHSCC
T ss_pred EEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhCCC
Confidence 99999999999984 99999865321 3567899999977532 1111 00111 1 2345555544332100100
Q ss_pred hhhhhhccCCCCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 002402 296 TAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 366 (927)
Q Consensus 296 l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~ 366 (927)
.... ....+||.+.+.. .|+|.+.+.-.. .++||+.+ .++.+.+++..+.+.++++.+.+
T Consensus 209 --~~~~---~~gggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 209 --PKAE---TGGGTSDGRFIAL-MGAEVVEFGPLN--STIHKVNE---CVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp --CEEE---CC--CHHHHHHHT-TTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHC-
T ss_pred --CEEe---cCCCCchHHHHHh-hCCCEEEEEeCC--CCCcCCcc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 0010 1235799999987 899999875433 45699985 77889999999999999988765
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.68 E-value=3e-16 Score=168.90 Aligned_cols=232 Identities=17% Similarity=0.138 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 166 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 166 (927)
+++.+.+++|.++ +..|..+.++.+ ||.++|+++| ++++.+.. ....|+
T Consensus 6 ~~~~~~l~~lv~i---ps~s~~e~~~~~-~l~~~l~~~G------~~~~~~~~---------------------~~~~nv 54 (268)
T 3t68_A 6 SPVLALAKELISR---QSVTPADAGCQD-LMIERLKALG------FEIESMVF---------------------EDTTNF 54 (268)
T ss_dssp CHHHHHHHHHHTS---CCBTTCCTTHHH-HHHHHHHHTT------CEECCCEE---------------------TTEEC-
T ss_pred HHHHHHHHHHhCC---CCCCCCchHHHH-HHHHHHHHCC------CeEEEEec---------------------CCccEE
Confidence 5788999999985 334444456788 9999999998 44432210 134699
Q ss_pred EEEEcCCCCCcCCCCEEEEEeecccccCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002402 167 VLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAHGFKNA 225 (927)
Q Consensus 167 Ia~i~G~~~~~~~~~~VLl~AHyDSv~~s---------------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~ 225 (927)
++++ |+ +.+.|++.+|+|+||.+ +|+.||.+|+|++|+++|.|++.+.+++.+
T Consensus 55 ~a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~ 128 (268)
T 3t68_A 55 WARR-GT-----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGS 128 (268)
T ss_dssp CEEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSE
T ss_pred EEEe-CC-----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCc
Confidence 9998 53 35689999999999853 599999999999999999998876678899
Q ss_pred EEEEEeCCCCCCc-cchHHHHhcCC-ccCCceEEEEeccCCCC--CCcc-ceecC-----CCHHHHHHHHHHhcCCCCcc
Q 002402 226 VIFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAIDLEAMGIG--GKSG-LFQAG-----PHPWAVENFAAAAKYPSGQV 295 (927)
Q Consensus 226 IvFlf~~aEE~Gl-~GS~~fv~~h~-~~~~i~a~INLD~~G~g--G~~~-lfq~g-----~~~~li~~y~~~a~~p~~~~ 295 (927)
|+|+|+.+||.|. .||+.+++.+. ...+..++|++|..+.. |..+ .-+.| ++..+++...++++.-.+..
T Consensus 129 v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~ 208 (268)
T 3t68_A 129 IGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQA 208 (268)
T ss_dssp EEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSC
T ss_pred EEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCC
Confidence 9999999999998 59999986542 23567899999987532 1111 00111 12235555554432101110
Q ss_pred hhhhhhccCCCCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 002402 296 TAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 366 (927)
Q Consensus 296 l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~ 366 (927)
.+......+||+..|.+ .|+|++.+... ...+||+.+ .++.+.+++..+.+.+++++|.+
T Consensus 209 -----~~~~~sgggtD~~~~~~-~g~p~~~~~~~--~~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 209 -----PALLTTGGTSDGRFIAQ-MGAQVVELGPV--NATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp -----CEEESSCCCHHHHHHHH-HTCEEEECCSB--CTTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred -----cEEecCccccHHHHHHh-cCCCEEEEeeC--CCCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 01001235799999997 89998876542 345699985 67788899999999999988764
No 17
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.58 E-value=2.6e-14 Score=161.04 Aligned_cols=226 Identities=18% Similarity=0.206 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 166 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 166 (927)
+++.+.|++|+++ |.++|.+ +++++ ||.+++++++ .++++| +..|+
T Consensus 7 ~~~~~~l~~L~~~-~s~sg~e--~~~~~-~l~~~l~~~g------~~~~~d------------------------~~gnl 52 (373)
T 1vhe_A 7 DETLTMLKDLTDA-KGIPGNE--REVRQ-VMKSYIEPFA------DEVTTD------------------------RLGSL 52 (373)
T ss_dssp CHHHHHHHHHHHS-CCCTTCC--HHHHH-HHHHHHGGGC------SEEEEC------------------------TTCCE
T ss_pred HHHHHHHHHHHcC-CCCCCch--HHHHH-HHHHHHHhhC------CEEEEc------------------------CCCcE
Confidence 3688899999996 5555543 47788 9999999998 345443 23589
Q ss_pred EEEEcCCCCCcCCCCEEEEEeeccccc-----------------------------------------------------
Q 002402 167 VLRIQPKYASEAAENAILVSSHIDTVF----------------------------------------------------- 193 (927)
Q Consensus 167 Ia~i~G~~~~~~~~~~VLl~AHyDSv~----------------------------------------------------- 193 (927)
+++++|+ ...+.|++.||+|+++
T Consensus 53 ia~~~g~----~~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~ 128 (373)
T 1vhe_A 53 IAKKTGA----ENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSP 128 (373)
T ss_dssp EEEEESS----TTSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCT
T ss_pred EEEecCC----CCCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCch
Confidence 9998874 2447899999999997
Q ss_pred ----------------------------CCCC---------------------CCCChhHHHHHHHHHHHHHhcCCCCCC
Q 002402 194 ----------------------------AAEG---------------------AGDCSSCVAVMLELARAMSQWAHGFKN 224 (927)
Q Consensus 194 ----------------------------~spG---------------------A~Dn~sGVA~mLElaR~L~~~~~~p~~ 224 (927)
..+| +.||.+|+|++|+++|.+++. .+++
T Consensus 129 ~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~--~~~~ 206 (373)
T 1vhe_A 129 EARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNT--DHPN 206 (373)
T ss_dssp TTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTS--CCSS
T ss_pred hhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhc--CCCc
Confidence 1123 899999999999999999875 3679
Q ss_pred cEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCCCCC----------------Cccc-eecC--CCHHHHHHHH
Q 002402 225 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG----------------KSGL-FQAG--PHPWAVENFA 285 (927)
Q Consensus 225 ~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG----------------~~~l-fq~g--~~~~li~~y~ 285 (927)
+|+|+|+++||.|+.|++.+... .+..++|++|+.+.++ ..+- +..+ .++.+++...
T Consensus 207 ~v~~~~~~~EE~G~~G~~~~~~~----~~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~ 282 (373)
T 1vhe_A 207 IVYGVGTVQEEVGLRGAKTAAHT----IQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVV 282 (373)
T ss_dssp EEEEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHH
T ss_pred eEEEEEECCcccChhhHHHHhcc----cCCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHH
Confidence 99999999999999999998642 1346789999876432 1110 0011 2456666555
Q ss_pred HHhcCCCCcchhhhhhccCCCCCCCchHHh--hhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 002402 286 AAAKYPSGQVTAQDLFASGAITSATDFQVY--KEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 363 (927)
Q Consensus 286 ~~a~~p~~~~l~~e~f~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~ 363 (927)
+.++.. +.....+. ..+..||...| .. .|+|++++.-. ...+||+. |+++.+.+++..+.+.++++.
T Consensus 283 ~~a~~~-gi~~~~~~----~~~ggtDa~~~~~~~-~GiPtv~lg~~--~~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~ 351 (373)
T 1vhe_A 283 ATAEEA-GIPYQFDA----IAGGGTDSGAIHLTA-NGVPALSITIA--TRYIHTHA---AMLHRDDYENAVKLITEVIKK 351 (373)
T ss_dssp HHHHHH-TCCCEEEE----ETTCCCTHHHHTTST-TCCCEEEEEEE--EBSTTSSC---EEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CCCeEEec----CCCCCccHHHHHHhC-CCCcEEEEccc--cccCCChh---heecHHHHHHHHHHHHHHHHH
Confidence 543211 11100101 12467999999 44 79999987643 23579985 678899999999999999998
Q ss_pred HhcC
Q 002402 364 AASS 367 (927)
Q Consensus 364 la~s 367 (927)
+.+.
T Consensus 352 l~~~ 355 (373)
T 1vhe_A 352 LDRK 355 (373)
T ss_dssp CCHH
T ss_pred hcHH
Confidence 8653
No 18
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.57 E-value=2.8e-14 Score=146.92 Aligned_cols=146 Identities=20% Similarity=0.235 Sum_probs=113.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccc
Q 002402 83 GFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD 162 (927)
Q Consensus 83 ~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 162 (927)
.++.+++.+.+++|.++ |.+.++++++++++ ||.++++++| .+++.+... ..
T Consensus 6 ~~~~~~~~~~l~~lv~i-~s~s~~~~e~~~~~-~l~~~l~~~g------~~~~~~~~~--------------------~g 57 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRI-RTVQPKPDYGAAVA-FFEETARQLG------LGCQKVEVA--------------------PG 57 (198)
T ss_dssp -CCCCHHHHHHHHHHTS-CCBTTSCCHHHHHH-HHHHHHHHHT------CEEEEEEEE--------------------TT
T ss_pred chhHHHHHHHHHHHhcC-CCCCCCcCHHHHHH-HHHHHHHHCC------CeEEEEEcC--------------------CC
Confidence 46778999999999996 44555445568889 9999999998 455554211 12
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEEeecccccC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 002402 163 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHG 221 (927)
Q Consensus 163 ~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------------spGA~Dn~sGVA~mLElaR~L~~~~~~ 221 (927)
..|++++++|+ ..+.+.|++.+|+|+|+. ++|+.||.+|+|++|+++|.|++.+.+
T Consensus 58 ~~~~i~~~~g~---~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~ 134 (198)
T 1q7l_A 58 YVVTVLTWPGT---NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHR 134 (198)
T ss_dssp EEEEEEEECCS---STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCC
T ss_pred CeEEEEEEccC---CCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCC
Confidence 36999999875 123478999999999864 378899999999999999999987777
Q ss_pred CCCcEEEEEeCCCCCC-ccchHHHHhcCCc-cCCceEEEE
Q 002402 222 FKNAVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAID 259 (927)
Q Consensus 222 p~~~IvFlf~~aEE~G-l~GS~~fv~~h~~-~~~i~a~IN 259 (927)
++++|+|+|+.+||.| +.|++.+++++.. ..+..++|+
T Consensus 135 ~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 135 FPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp CSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred CCCCEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 8999999999999997 8999999864432 124556664
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.57 E-value=2.6e-14 Score=159.77 Aligned_cols=220 Identities=19% Similarity=0.215 Sum_probs=156.8
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEE
Q 002402 89 AIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVL 168 (927)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVIa 168 (927)
..+.|++|+++ |.+.|.++ +++++ ||.+++++++ .+++.| +..|+++
T Consensus 8 ~~~~l~~L~~~-~s~sg~e~-~~~~~-~l~~~l~~~g------~~~~~d------------------------~~gnlia 54 (353)
T 1y0y_A 8 DYELLKKVVEA-PGVSGYEF-LGIRD-VVIEEIKDYV------DEVKVD------------------------KLGNVIA 54 (353)
T ss_dssp CHHHHHHHHHS-CCBTTCGG-GTHHH-HHHHHHGGGS------SEEEEC------------------------TTCCEEE
T ss_pred HHHHHHHHHhC-CCCCccch-HHHHH-HHHHHHHhhC------CeEEEc------------------------CCCCEEE
Confidence 46789999985 55666542 46788 9999999988 345443 2359999
Q ss_pred EEcCCCCCcCCCCEEEEEeeccccc-------------------------------------------------------
Q 002402 169 RIQPKYASEAAENAILVSSHIDTVF------------------------------------------------------- 193 (927)
Q Consensus 169 ~i~G~~~~~~~~~~VLl~AHyDSv~------------------------------------------------------- 193 (927)
++.|+ ++.|+++||+|+++
T Consensus 55 ~~~g~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~ 128 (353)
T 1y0y_A 55 HKKGE------GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPE 128 (353)
T ss_dssp EECCS------SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC---------
T ss_pred EecCC------CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchh
Confidence 98652 46899999999995
Q ss_pred ---------------------------CCCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002402 194 ---------------------------AAEG--------------------AGDCSSCVAVMLELARAMSQWAHGFKNAV 226 (927)
Q Consensus 194 ---------------------------~spG--------------------A~Dn~sGVA~mLElaR~L~~~~~~p~~~I 226 (927)
..+| |.||.+|+|++|+++|.+++ ++++|
T Consensus 129 ~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i 204 (353)
T 1y0y_A 129 DRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADV 204 (353)
T ss_dssp ----CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEE
T ss_pred hccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeE
Confidence 2345 69999999999999999864 67899
Q ss_pred EEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCCCCCCcc---------------c-e---ecCCCHHHHHHHHHH
Q 002402 227 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSG---------------L-F---QAGPHPWAVENFAAA 287 (927)
Q Consensus 227 vFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG~~~---------------l-f---q~g~~~~li~~y~~~ 287 (927)
+|+|+++||.|+.||+.+... .+...+|++|+.+.++... + + ....++.+++...+.
T Consensus 205 ~~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~ 280 (353)
T 1y0y_A 205 YFVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEEL 280 (353)
T ss_dssp EEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHH
T ss_pred EEEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHH
Confidence 999999999999999998742 2346899999876532110 0 0 011246666666555
Q ss_pred hcCCCCcchhhhhhccCCCCCCCchHHh--hhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHh
Q 002402 288 AKYPSGQVTAQDLFASGAITSATDFQVY--KEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAA 365 (927)
Q Consensus 288 a~~p~~~~l~~e~f~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la 365 (927)
++.. +.....+. ..+..||...| .. .|+|.+++.-. ...+||+. |+++.+.+.+..+.+.+++..+.
T Consensus 281 a~~~-gi~~~~~~----~~~ggsDa~~~~~~~-~GiPtv~lg~~--~~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~ 349 (353)
T 1y0y_A 281 AKKH-EIPYQLEI----LLGGGTDAGAIHLTK-AGVPTGALSVP--ARYIHSNT---EVVDERDVDATVELMTKALENIH 349 (353)
T ss_dssp HHHT-TCCEEEEE----CSSCCCTHHHHTTST-TCCCEEEEEEE--EBSCSSSC---EEEEHHHHHHHHHHHHHHHHHGG
T ss_pred HHHc-CCCEEEee----cCCCCchHHHHHHhC-CCCcEEEEccc--ccccCCHH---HhcCHHHHHHHHHHHHHHHHhhh
Confidence 4321 21110101 13467999999 44 79999997643 24589975 67788999999999999999886
Q ss_pred c
Q 002402 366 S 366 (927)
Q Consensus 366 ~ 366 (927)
+
T Consensus 350 ~ 350 (353)
T 1y0y_A 350 E 350 (353)
T ss_dssp G
T ss_pred h
Confidence 5
No 20
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.54 E-value=4.6e-14 Score=156.21 Aligned_cols=148 Identities=18% Similarity=0.180 Sum_probs=104.9
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCCCCC----------
Q 002402 198 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG---------- 267 (927)
Q Consensus 198 A~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG---------- 267 (927)
|.||.+|+|++|+++|.+++.+ ++++|.|+|+++||.|+.|++.++.. .+..++|++|+.+..+
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6999999999999999998753 67999999999999999999999742 2456899999877531
Q ss_pred -Cccce---ecCCCHHHHHHHHHHhcCCCCcchhhhhhccCCCCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcC
Q 002402 268 -KSGLF---QAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLD 343 (927)
Q Consensus 268 -~~~lf---q~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d 343 (927)
..+-+ ....++.+++...+.++.- +.. ++....+.+||+..|.. |+|++++.-. ...+||+. |
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~~-gi~-----~~~~~~~ggtDa~~~~~--GiPtv~lg~~--~~~~Hs~~---E 311 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEKN-GIE-----IQIGVTGGGTDASAFQD--RSKTLALSVP--IKYLHSEV---E 311 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHHT-TCC-----CEEEECSSCCGGGGGTT--TSEEEEEECE--EBSCSSTT---C
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-CCC-----eEEecCCCCchHHHHHc--CCCEEEEcCC--cCCCCChh---h
Confidence 11111 1112566666665554321 211 11112346899999986 9999987532 34589975 6
Q ss_pred CCCHhHHHHHHHHHHHHHHHH
Q 002402 344 LLKPGSLQHLGENMLAFLLQA 364 (927)
Q Consensus 344 ~id~~slq~~g~~vl~lv~~l 364 (927)
+++.+.+++..+.+.+++..+
T Consensus 312 ~v~~~dl~~~~~ll~~~~~~l 332 (332)
T 2wyr_A 312 TLHLNDLEKLVKLIEALAFEL 332 (332)
T ss_dssp EEEHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHHHhC
Confidence 677888999998888887653
No 21
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.53 E-value=5.8e-14 Score=156.76 Aligned_cols=224 Identities=16% Similarity=0.232 Sum_probs=146.0
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002402 84 FSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 163 (927)
Q Consensus 84 fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 163 (927)
.+.+++.+.|++|.++ |.+.|. .+++++ ||.++++++| .++++| +.
T Consensus 3 ~~~~~~~~~l~~lv~i-~s~s~~--e~~~~~-~l~~~l~~~g------~~~~~d------------------------~~ 48 (349)
T 2gre_A 3 HHTKETMELIKELVSI-PSPSGN--TAKIIN-FIENYVSEWN------VETKRN------------------------NK 48 (349)
T ss_dssp CHHHHHHHHHHHHHTS-CCBTTC--CHHHHH-HHHHHTTTSS------SEEEEC------------------------SS
T ss_pred ccHHHHHHHHHHHHhC-CCCCcc--HHHHHH-HHHHHHHHhC------CEEEEe------------------------cC
Confidence 3467899999999996 445443 346788 9999999988 445443 23
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEEeeccccc----------------C---------------------------------
Q 002402 164 NHIVLRIQPKYASEAAENAILVSSHIDTVF----------------A--------------------------------- 194 (927)
Q Consensus 164 ~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~----------------~--------------------------------- 194 (927)
.|++++++|+ .+.+.|++.+|+|+++ .
T Consensus 49 gnl~a~~~g~----~~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~ 124 (349)
T 2gre_A 49 GALILTVKGK----NDAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTS 124 (349)
T ss_dssp SCEEEEECCS----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC---
T ss_pred CcEEEEecCC----CCCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCC
Confidence 4899999764 2346799999999983 0
Q ss_pred ------------------------------------CC---------------C-----CCCChhHHHHHHHHHHHHHhc
Q 002402 195 ------------------------------------AE---------------G-----AGDCSSCVAVMLELARAMSQW 218 (927)
Q Consensus 195 ------------------------------------sp---------------G-----A~Dn~sGVA~mLElaR~L~~~ 218 (927)
.+ | +.||.+|++++|+++|.+++.
T Consensus 125 ~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~ 204 (349)
T 2gre_A 125 VHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDE 204 (349)
T ss_dssp ----------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHH
T ss_pred ccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhc
Confidence 00 1 699999999999999999987
Q ss_pred CCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCCCCC-C-----ccce----ecC-CCHHHHHHHHHH
Q 002402 219 AHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG-K-----SGLF----QAG-PHPWAVENFAAA 287 (927)
Q Consensus 219 ~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG-~-----~~lf----q~g-~~~~li~~y~~~ 287 (927)
+.+++++|.|+|++.||.|+.|++.+ ..+...+|++|+.+.++ + .... +.+ .++.+.+.+.+.
T Consensus 205 ~~~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~ 278 (349)
T 2gre_A 205 NVTLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVEL 278 (349)
T ss_dssp TCCCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHH
T ss_pred cCCCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHH
Confidence 66788999999999999999999976 23578999999987653 1 1111 112 256676666555
Q ss_pred hcCCCCcchhhhhhccCCCCCCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHH
Q 002402 288 AKYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLL 362 (927)
Q Consensus 288 a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~ 362 (927)
++.. +-....+.. ...+||+.+|.. ..|+|++++.. ...++|| .|.++.+.+.+..+.+.+++.
T Consensus 279 a~~~-gi~~q~~~~----~ggGsDa~~~~~~~~GiPt~~lg~--~~~~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 279 AKTN-HIEYKVDIY----PYYGSDASAAIRAGFDVKHALIGA--GIDSSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp HHHH-TCCEEEEEC----SCC--------CCSSSCEEEEEEE--CCBSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHc-CCCcEEecc----CCCCccHHHHHHhCCCCcEEEecc--Ccccccc----ceeccHHHHHHHHHHHHHHHh
Confidence 4211 111111111 235799988842 36999997753 2345787 577788888888887777765
No 22
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.46 E-value=2.5e-13 Score=151.06 Aligned_cols=218 Identities=18% Similarity=0.243 Sum_probs=137.5
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEEc
Q 002402 92 HVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQ 171 (927)
Q Consensus 92 ~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVIa~i~ 171 (927)
.|++|.++ |.+.|.+ +++++ ||.+++++++ .++++| +..|++++++
T Consensus 3 ~l~~L~~~-~s~sg~e--~~~~~-~l~~~l~~~g------~~~~~d------------------------~~gnlia~~~ 48 (340)
T 2fvg_A 3 YLKELSMM-PGVSGDE--GKVRD-FIKSKIEGLV------DNLYTD------------------------VLGNLIALKR 48 (340)
T ss_dssp CHHHHHHS-CCBTTCC--HHHHH-HHHHHHGGGS------SEEEEC------------------------TTSCEEEEEC
T ss_pred HHHHHHcC-CCCCCch--HHHHH-HHHHHHHhhC------CEEEEe------------------------CCCcEEEEec
Confidence 47788885 5555543 36788 9999999998 345442 2349999997
Q ss_pred CCCCCcCCCCEEEEEeeccccc----------------------------------------------------------
Q 002402 172 PKYASEAAENAILVSSHIDTVF---------------------------------------------------------- 193 (927)
Q Consensus 172 G~~~~~~~~~~VLl~AHyDSv~---------------------------------------------------------- 193 (927)
|+ .+.+.|++.||+|+++
T Consensus 49 g~----~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~ 124 (340)
T 2fvg_A 49 GR----DSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFE 124 (340)
T ss_dssp CS----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCST
T ss_pred CC----CCCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcc
Confidence 64 2346899999999997
Q ss_pred -----------------CCCC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC
Q 002402 194 -----------------AAEG-------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEG 237 (927)
Q Consensus 194 -----------------~spG-------------------A~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~G 237 (927)
..+| |.||.+|++++|+++|.++ +++++|+|+|+++||.|
T Consensus 125 ~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G 200 (340)
T 2fvg_A 125 NLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETG 200 (340)
T ss_dssp TEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC--
T ss_pred cEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccc
Confidence 1124 6899999999999999886 47789999999999999
Q ss_pred ccchHHHHhcCCccCCceEEEEeccCCCC---CCc-------------c-ceecC--CCHHHHHHHHHHhcCCCCcchhh
Q 002402 238 LNGAHSFVTQHPWSTTIRVAIDLEAMGIG---GKS-------------G-LFQAG--PHPWAVENFAAAAKYPSGQVTAQ 298 (927)
Q Consensus 238 l~GS~~fv~~h~~~~~i~a~INLD~~G~g---G~~-------------~-lfq~g--~~~~li~~y~~~a~~p~~~~l~~ 298 (927)
+.|++.++.+ .+...+|++|+.+.+ |+. + ....+ .++.+.+...+.++. .+..
T Consensus 201 ~~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~-~gi~--- 272 (340)
T 2fvg_A 201 LRGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKN-NDIP--- 272 (340)
T ss_dssp ---CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHH-TTCC---
T ss_pred hhhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCC---
Confidence 9999999853 234678999886532 211 0 00011 245555555544321 1110
Q ss_pred hhhccC-CCCCCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 002402 299 DLFASG-AITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 366 (927)
Q Consensus 299 e~f~~g-~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~ 366 (927)
++.. ..+..||...|.. ..|+|++.+.-.. ..+||+. |+++.+.+++..+.+..+++.+.+
T Consensus 273 --~~~~~~~~ggtDa~~~~~~~~GiP~v~~g~~~--~~~Hs~~---E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 273 --FQMKRRTAGGTDAGRYARTAYGVPAGVISTPA--RYIHSPN---SIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp --CEECCCC-------------CCSCEEEEEEEE--EESSTTC---EEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred --eEEEecCCCCccHHHHHhhCCCCcEEEecccc--cccCChh---hcccHHHHHHHHHHHHHHHHhccc
Confidence 1111 2346799999875 2699999775432 2389986 567789999999999999988765
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.42 E-value=1.8e-12 Score=147.33 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=108.2
Q ss_pred CCHHHHHHHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccc
Q 002402 84 FSEFEAIKHVKALTELGP-------HPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGR 156 (927)
Q Consensus 84 fs~~rA~~~L~~L~~igp-------r~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~ 156 (927)
.+.+|+++.|++|++++. |+..|..+.++++ ||.++|+++| ++++.|
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~-~l~~~l~~~g------~~~~~d------------------- 55 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKD-LVASYMREAG------LFVYED------------------- 55 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHH-HHHHHHHHHT------CEEEEC-------------------
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHH-HHHHHHHHCC------CEEEEc-------------------
Confidence 357899999999999854 4445888889999 9999999998 455543
Q ss_pred cccccccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC
Q 002402 157 TLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEE 236 (927)
Q Consensus 157 ~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~ 236 (927)
...||+++++|+ ..+.+.|++.||+|+++. .|+.|+.+|++++|++++.|++.+.+++++|.|+|+.+||.
T Consensus 56 -----~~gnv~a~~~g~---~~~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~ 126 (408)
T 3n5f_A 56 -----AAGNLIGRKEGT---NPDATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEG 126 (408)
T ss_dssp -----TTCCEEEEECCS---STTSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSC
T ss_pred -----CCCCEEEEecCC---CCCCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccc
Confidence 224999999885 123689999999999984 68999999999999999999988777899999999999996
Q ss_pred -----CccchHHHHhc
Q 002402 237 -----GLNGAHSFVTQ 247 (927)
Q Consensus 237 -----Gl~GS~~fv~~ 247 (927)
|+.||+.++.+
T Consensus 127 ~~~~~g~~Gs~~~~~~ 142 (408)
T 3n5f_A 127 ARFRFGMIGSRAMAGT 142 (408)
T ss_dssp TTTTCCCHHHHHHHTC
T ss_pred cccCCCCcCHHHHHcC
Confidence 78899999854
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.37 E-value=1.1e-11 Score=143.51 Aligned_cols=156 Identities=13% Similarity=0.149 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCH----HHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002402 86 EFEAIKHVKALTELGPHPVGSD----ALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 161 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~----~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 161 (927)
.+++.+.+++|.++ |.+.+.+ +..++++ ||.++|+++| ++++.+..... ...+ +. ...
T Consensus 19 ~~~~~~~l~~l~~~-ps~s~~e~~~~~~~~~~~-~l~~~l~~~G------~~~~~~~~~~~----~~~~----~~--~~~ 80 (479)
T 2zog_A 19 QDRYVKKLAEWVAI-QSVSAWPEKRGEIRRMME-VAAADVQRLG------GSVELVDIGKQ----KLPD----GS--EIP 80 (479)
T ss_dssp HHHHHHHHHHHHHS-CCBTTCGGGHHHHHHHHH-HHHHHHHHTT------CEEEEECCCEE----ECTT----SC--EEE
T ss_pred HHHHHHHHHHHhcC-CCccCCcccchHHHHHHH-HHHHHHHHcC------CeEEEeecccc----ccCC----Cc--ccC
Confidence 56889999999986 4455543 3358899 9999999998 55655421100 0000 00 000
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEEeecccccC---------------------CCCCCCChhHHHHHHHHHHHHHhcCC
Q 002402 162 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAH 220 (927)
Q Consensus 162 ~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------------spGA~Dn~sGVA~mLElaR~L~~~~~ 220 (927)
...||++++.+. .+.+.|++.+|+|++|. +.|+.||..|+|++|++++.|.+.+.
T Consensus 81 ~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~ 156 (479)
T 2zog_A 81 LPPILLGKLGSD----PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ 156 (479)
T ss_dssp CCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEecCC----CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCC
Confidence 127999999653 34578999999999875 36889999999999999999998777
Q ss_pred CCCCcEEEEEeCCCCCCccchHHHHhcCC--ccCCceEEEEeccC
Q 002402 221 GFKNAVIFLFNTGEEEGLNGAHSFVTQHP--WSTTIRVAIDLEAM 263 (927)
Q Consensus 221 ~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~--~~~~i~a~INLD~~ 263 (927)
+++++|+|+|+.+||.|..|++.+++++. +..++.+++++|..
T Consensus 157 ~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~ 201 (479)
T 2zog_A 157 EIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNY 201 (479)
T ss_dssp CCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCB
T ss_pred CCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCCC
Confidence 78899999999999999999999998764 33467888998863
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.33 E-value=1.1e-11 Score=140.11 Aligned_cols=146 Identities=21% Similarity=0.298 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHH-HHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccc
Q 002402 86 EFEAIKHVKALTELGPHPVGSDA-LDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLN 164 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~~-n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~ 164 (927)
.+++.+.|++|.++ |.+.+.++ ..++++ ||.++|+++| ++++.+..... ....
T Consensus 18 ~~~~~~~l~~lv~i-~s~s~~~~~~~~~~~-~l~~~l~~~G------~~~~~~~~~~~------------------~~~~ 71 (393)
T 1cg2_A 18 QPAVIKTLEKLVNI-ETGTGDAEGIAAAGN-FLEAELKNLG------FTVTRSKSAGL------------------VVGD 71 (393)
T ss_dssp HHHHHHHHHHHHTS-CCBTTCHHHHHHHHH-HHHHHHHHTT------CEEEEEECSTT------------------CCSE
T ss_pred HHHHHHHHHHHhcC-CCCCCCHHHHHHHHH-HHHHHHHHcC------CeEEEEecCcC------------------CCCC
Confidence 57889999999997 45556554 358899 9999999998 55655421100 0135
Q ss_pred eEEEEEcCCCCCcCCCCEEEEEeecccccC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002402 165 HIVLRIQPKYASEAAENAILVSSHIDTVFA-----------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVI 227 (927)
Q Consensus 165 NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~-----------------spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~Iv 227 (927)
||+++++|+ .++.|++.+|+|+++. ++|+.|+..|+|++|++++.|++.+.+++.+|+
T Consensus 72 ~v~a~~~g~-----~~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 146 (393)
T 1cg2_A 72 NIVGKIKGR-----GGKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTIT 146 (393)
T ss_dssp EEEEEEECS-----SCCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred eEEEEECCC-----CCceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 999999864 2367999999999974 378999999999999999999987766777999
Q ss_pred EEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCC
Q 002402 228 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 264 (927)
Q Consensus 228 Flf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G 264 (927)
|+|+.+||.|..|++.+++++. .++.+++++|..+
T Consensus 147 ~~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 147 VLFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp EEEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EEEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 9999999999999999986532 3467788888654
No 26
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.27 E-value=4.5e-11 Score=133.44 Aligned_cols=135 Identities=22% Similarity=0.260 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002402 86 EFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 165 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 165 (927)
.++..+.+++|.++ |.+.+ .+.++++ ||.++|+++| ++++.+ ..|
T Consensus 10 ~~~~~~~~~~l~~~-ps~s~--~e~~~~~-~l~~~l~~~g------~~~~~~-------------------------~~n 54 (356)
T 3ct9_A 10 TAEAVSLLKSLISI-PSISR--EETQAAD-FLQNYIEAEG------MQTGRK-------------------------GNN 54 (356)
T ss_dssp HHHHHHHHHHHHTS-CCBTT--CCHHHHH-HHHHHHHHTT------CCEEEE-------------------------TTE
T ss_pred HHHHHHHHHHHhcC-CCCCC--ChHHHHH-HHHHHHHHCC------CeEEEE-------------------------eee
Confidence 35788889999985 44433 3347788 9999999998 445432 259
Q ss_pred EEEEEcCCCCCcCCCCEEEEEeecccccC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002402 166 IVLRIQPKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAV 226 (927)
Q Consensus 166 VIa~i~G~~~~~~~~~~VLl~AHyDSv~~-------------------spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~I 226 (927)
++++++|+ ..+.+.|++.+|+|+++. +.|+.|+.+|+|++|++++.|++.+ ++++|
T Consensus 55 v~a~~~g~---~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v 129 (356)
T 3ct9_A 55 VWCLSPMF---DLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNL 129 (356)
T ss_dssp EEEECSSC---CTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEE
T ss_pred EEEEEecC---CCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCE
Confidence 99999873 134578999999999874 3688899999999999999999865 78999
Q ss_pred EEEEeCCCCC-CccchHHHHhcCCccCCceEEEEeccC
Q 002402 227 IFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEAM 263 (927)
Q Consensus 227 vFlf~~aEE~-Gl~GS~~fv~~h~~~~~i~a~INLD~~ 263 (927)
+|+|+.+||. |+.|++.++++.+ ++.+++++|..
T Consensus 130 ~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 130 IYLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp EEEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EEEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 9999999999 9999999997653 45577888765
No 27
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.25 E-value=2.6e-11 Score=138.94 Aligned_cols=138 Identities=13% Similarity=0.165 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHhcCCCCCC--------CHHHHHHHHHHHHHHHHhhccccCCcee-EEEEEEeccCCccccccccccccc
Q 002402 87 FEAIKHVKALTELGPHPVG--------SDALDRALQVYVFAAAQKIKETKHWEVD-VEVDFFHAKSGANRLVSGAFMGRT 157 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~G--------S~~n~~a~~~yL~~~l~~ig~~~~~~~~-vevd~f~~~~g~~~~~g~~~~~~~ 157 (927)
+|+.+.+++|.+|. .+.+ ++++.++++ ||.++++++| ++ +++|
T Consensus 27 ~~~~~~l~~lv~i~-s~s~~~~~~~~~~~~e~~~~~-~l~~~l~~~G------~~~~~~d-------------------- 78 (434)
T 3ife_A 27 EELIERFTRYVKID-TQSNEDSHTVPTTPGQIEFGK-LLVEELKEVG------LTEVTMD-------------------- 78 (434)
T ss_dssp HHHHHHHHHHHTSC-CBCCTTCCSSSSSHHHHHHHH-HHHHHHHHHT------CEEEEEC--------------------
T ss_pred HHHHHHHHhhEEee-ccCCCccCCCCCCHHHHHHHH-HHHHHHHHcC------CceEEEC--------------------
Confidence 57888999999873 3333 446668899 9999999998 43 5443
Q ss_pred ccccccceEEEEEcCCCCCcCCCCEEEEEeecccccCCC-----------------------------------------
Q 002402 158 LIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAE----------------------------------------- 196 (927)
Q Consensus 158 ~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~sp----------------------------------------- 196 (927)
+..||+++++|+. ..+.+.|++.+|+|+||..+
T Consensus 79 ----~~~nv~a~~~g~~--~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~ 152 (434)
T 3ife_A 79 ----DNGYVMATLPANT--DKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGH 152 (434)
T ss_dssp ----TTSCEEEEECCBS--SSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTS
T ss_pred ----CCcEEEEEeCCCC--CCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCC
Confidence 2369999998852 12357899999999997411
Q ss_pred ------C----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEecc
Q 002402 197 ------G----AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEA 262 (927)
Q Consensus 197 ------G----A~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~ 262 (927)
| +.||..|+|++|++++.|.+.+..++.+|.|+|+.+||.| .|++.+..+ .. ++.+++++|.
T Consensus 153 ~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~-~~--~~d~~~~~d~ 224 (434)
T 3ife_A 153 TIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVE-AF--GASFAYMMDG 224 (434)
T ss_dssp CEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHH-HH--CCSEEEECCC
T ss_pred cEEECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhh-hc--CCCEEEEecC
Confidence 2 4899999999999999999877778899999999999999 899887422 11 4677888884
No 28
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.25 E-value=5.3e-11 Score=135.87 Aligned_cols=158 Identities=14% Similarity=0.072 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccc-cccccce
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTL-IYSDLNH 165 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~-~y~~~~N 165 (927)
+++.+.+++|.++ |- .|..+.++++ ||.++|+++| ++++........ .....+ +..... ......|
T Consensus 26 ~~~~~~l~~l~~~-ps--~s~~e~~~~~-~l~~~l~~~G------~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~ 92 (433)
T 3pfo_A 26 NDQVAFLQRMVQF-RS--VRGEEAPQQE-WLAQQFADRG------YKVDTFSLADVD-IASHPK--AAPMDTIDPAGSMQ 92 (433)
T ss_dssp HHHHHHHHHHHTS-CC--BTTCCHHHHH-HHHHHHHHTT------CEEEEEETGGGT-GGGSTT--CCCCTTCCGGGCEE
T ss_pred HHHHHHHHHHhcC-CC--CCCCHHHHHH-HHHHHHHHCC------CceEEEecchhh-hhcccc--ccccccccCCCCcE
Confidence 6778888888885 33 3444457899 9999999998 455443211100 000000 000000 1234689
Q ss_pred EEEEEcCCCCCcCCCCEEEEEeecccccCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 002402 166 IVLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAHGFKN 224 (927)
Q Consensus 166 VIa~i~G~~~~~~~~~~VLl~AHyDSv~~s---------------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~ 224 (927)
|+++++|. .+++.|++.+|+|++|.+ .|+.|+.+|+|++|++++.|++.+.++++
T Consensus 93 via~~~g~----~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~ 168 (433)
T 3pfo_A 93 VVATADSD----GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDA 168 (433)
T ss_dssp EEEEECCC----CCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESS
T ss_pred EEEEEecC----CCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999874 356789999999999853 49999999999999999999987667889
Q ss_pred cEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCC
Q 002402 225 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 264 (927)
Q Consensus 225 ~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G 264 (927)
+|.|+|..+||.|..|++.++.+. .++.++|+.|..+
T Consensus 169 ~v~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 169 RVHVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp CEEEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred cEEEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 999999999999889999998643 2567788888554
No 29
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.24 E-value=4.5e-11 Score=138.68 Aligned_cols=146 Identities=14% Similarity=0.202 Sum_probs=111.6
Q ss_pred HH-HHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002402 86 EF-EAIKHVKALTELGPHPVGSD-ALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 163 (927)
Q Consensus 86 ~~-rA~~~L~~L~~igpr~~GS~-~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 163 (927)
.+ ++.+.+++|.++ |.+.+.+ +..++++ ||.++|+++| ++++++. . ...
T Consensus 42 ~~~~~~~~l~~l~~i-ps~s~~e~~~~~~~~-~l~~~l~~~G------~~~~~~~--~-------------------~~~ 92 (481)
T 2pok_A 42 VAQHYFEVLRTLISK-KSVFAQQVGLKEVAN-YLGEIFKRVG------AEVEIDE--S-------------------YTA 92 (481)
T ss_dssp HHHHHHHHHHHHHHS-CCCGGGCTTHHHHHH-HHHHHHHHTT------CEEEEEC--S-------------------SSS
T ss_pred hhHHHHHHHHHHHcC-CCcCCCCHHHHHHHH-HHHHHHHHcC------CEEEEec--C-------------------CCC
Confidence 35 788899999986 4444432 3358899 9999999998 4555431 0 134
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEEeecccccC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 002402 164 NHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGF 222 (927)
Q Consensus 164 ~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------------spGA~Dn~sGVA~mLElaR~L~~~~~~p 222 (927)
.||+++++|. ..+.+.|++.+|+|++|. +.|+.||.+|+|++|++++.|++.+..+
T Consensus 93 ~~v~a~~~g~---~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~ 169 (481)
T 2pok_A 93 PFVMAHFKSS---RPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDL 169 (481)
T ss_dssp CEEEEEECCS---STTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSC
T ss_pred cEEEEEecCC---CCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCC
Confidence 7999999864 134578999999999864 3688999999999999999999875578
Q ss_pred CCcEEEEEeCCCCCCccchHHHHhcCCc-cCCceEEEEeccC
Q 002402 223 KNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAIDLEAM 263 (927)
Q Consensus 223 ~~~IvFlf~~aEE~Gl~GS~~fv~~h~~-~~~i~a~INLD~~ 263 (927)
+++|+|+|+.+||.|..|++.+++++.. .+++.++|+.|..
T Consensus 170 ~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~ 211 (481)
T 2pok_A 170 PVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGT 211 (481)
T ss_dssp SSEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCB
T ss_pred CCCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCCC
Confidence 8999999999999999999999865421 1225677777753
No 30
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.21 E-value=2.1e-10 Score=133.32 Aligned_cols=156 Identities=14% Similarity=0.147 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHhcCCCC--CCCH---H-HHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccc
Q 002402 86 EFEAIKHVKALTELGPHP--VGSD---A-LDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLI 159 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~--~GS~---~-n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 159 (927)
.++..+.+++|.++ |-+ .+.+ + ..++.+ ||.++|+++| ++++.+.... ..... |. .
T Consensus 24 ~~~~i~~l~~lv~i-ps~~~s~~~~~~~~~~~~~~-~l~~~l~~~G------~~~~~~~~~~----~~~~~----g~--~ 85 (485)
T 3dlj_A 24 QDEFVQTLKEWVAI-ESDSVQPVPRFRQELFRMMA-VAADTLQRLG------ARVASVDMGP----QQLPD----GQ--S 85 (485)
T ss_dssp HHHHHHHHHHHHTS-CCBSSSCCHHHHHHHHHHHH-HHHHHHHHTT------CEEEEECCCE----EEC------CC--E
T ss_pred HHHHHHHHHHHhcC-CCccCCCCccccHHHHHHHH-HHHHHHHHcC------CeEEEEecCc----ccccC----CC--c
Confidence 46788888999885 444 4442 2 347889 9999999998 4555432100 00000 00 0
Q ss_pred ccccceEEEEEcCCCCCcCCCCEEEEEeecccccC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 002402 160 YSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQW 218 (927)
Q Consensus 160 y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------------spGA~Dn~sGVA~mLElaR~L~~~ 218 (927)
+....||++++.+. .+++.|++.+|+|++|. +.|+.||..|+|++|++++.|++.
T Consensus 86 ~~~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~ 161 (485)
T 3dlj_A 86 LPIPPVILAELGSD----PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRAL 161 (485)
T ss_dssp EECCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred cCCCcEEEEEECCC----CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHh
Confidence 00135899999653 35678999999999875 378999999999999999999988
Q ss_pred CCCCCCcEEEEEeCCCCCCccchHHHHhcCCc--cCCceEEEEeccC
Q 002402 219 AHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAIDLEAM 263 (927)
Q Consensus 219 ~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~--~~~i~a~INLD~~ 263 (927)
+.+++.+|+|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 162 ~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 162 EQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp TCCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CCCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 77889999999999999999999999987642 3578889998854
No 31
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.21 E-value=7.7e-11 Score=136.78 Aligned_cols=128 Identities=15% Similarity=0.130 Sum_probs=105.3
Q ss_pred CCCHHHHHHHHHHH-HhcCC--------------CCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccc
Q 002402 83 GFSEFEAIKHVKAL-TELGP--------------HPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANR 147 (927)
Q Consensus 83 ~fs~~rA~~~L~~L-~~igp--------------r~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~ 147 (927)
+.+.+++++.|++| .+|+. |+..|.++.++++ ||.++++++| ++++++
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~-~l~~~l~~~G------~~v~~d---------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRD-WFTNECESLG------CKVKVD---------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEB----------
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHH-HHHHHHHHcC------CEEEEe----------
Confidence 46778999999999 98732 2334677778999 9999999998 455432
Q ss_pred ccccccccccccccccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002402 148 LVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVI 227 (927)
Q Consensus 148 ~~g~~~~~~~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~Iv 227 (927)
+..||+++++|+ .+++.|++.+|+|+||. .|..|+..|+|++|++++.|.+.+.+++++|+
T Consensus 91 --------------~~gnvia~~~g~----~~~~~i~l~~H~DtVp~-~g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~ 151 (474)
T 2v8h_A 91 --------------KIGNMFAVYPGK----NGGKPTATGSHLDTQPE-AGKYDGILGVLAGLEVLRTFKDNNYVPNYDVC 151 (474)
T ss_dssp --------------TTCCEEEEECCS----SCCSCEEEEECCCCCSS-BCSSTTHHHHHHHHHHHHHHHHHTCCCSSCEE
T ss_pred --------------cCceEEEEECCC----CCCCeEEEEEecccCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 224899999874 23347999999999985 47889999999999999999988778899999
Q ss_pred EEEeCCCCC-----CccchHHHHh
Q 002402 228 FLFNTGEEE-----GLNGAHSFVT 246 (927)
Q Consensus 228 Flf~~aEE~-----Gl~GS~~fv~ 246 (927)
|+|+.+||. |+.||+.+..
T Consensus 152 lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 152 VVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEEECCccCCCCCCCcccHHHHHh
Confidence 999999998 7889999974
No 32
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.21 E-value=6.8e-11 Score=132.34 Aligned_cols=149 Identities=19% Similarity=0.268 Sum_probs=111.3
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccc
Q 002402 83 GFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD 162 (927)
Q Consensus 83 ~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 162 (927)
.++.+++.+.+++|.++ |. .|..+.++++ ||.++|+++| ++++.+.... .....
T Consensus 2 ~~~~~~~~~~l~~l~~~-ps--~s~~e~~~~~-~l~~~l~~~G------~~v~~~~~~~----------------~~~~~ 55 (373)
T 3gb0_A 2 MINQERLVNEFMELVQV-DS--ETKFEAEICK-VLTKKFTDLG------VEVFEDDTMA----------------VTGHG 55 (373)
T ss_dssp CSCHHHHHHHHHHHHTS-CC--BTTCCHHHHH-HHHHHHHHTT------CEEEECSCHH----------------HHCCS
T ss_pred CCCHHHHHHHHHHHhcc-cC--CCccHHHHHH-HHHHHHHHCC------CEEEEecccc----------------ccCCC
Confidence 36789999999999986 33 3444568899 9999999998 5555432100 00123
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEEeecccccC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCC
Q 002402 163 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------AEGA----GDCSSCVAVMLELARAMSQWAHGFKN 224 (927)
Q Consensus 163 ~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~--------------spGA----~Dn~sGVA~mLElaR~L~~~~~~p~~ 224 (927)
..||+++++|+ ..+.+.|++.+|+|++|. +.|+ .||..|+|++|++++.|++.+. ++.
T Consensus 56 ~~nv~a~~~g~---~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~ 131 (373)
T 3gb0_A 56 AGNLICTLPAT---KDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHG 131 (373)
T ss_dssp SCCEEEEECCS---STTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred ceeEEEEecCC---CCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCC
Confidence 47999999874 135678999999999963 2466 5999999999999999998654 678
Q ss_pred cEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCC
Q 002402 225 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 264 (927)
Q Consensus 225 ~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G 264 (927)
+|.|+|+.+||.|..|++.+..+. .+....+++|..+
T Consensus 132 ~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 168 (373)
T 3gb0_A 132 TIEFIITVGEESGLVGAKALDRER---ITAKYGYALDSDG 168 (373)
T ss_dssp CEEEEEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECS
T ss_pred CEEEEEEeccccCchhhhhhCHHh---cCCCEEEEEcCCC
Confidence 999999999999999999885322 2345667777544
No 33
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.18 E-value=3e-10 Score=126.22 Aligned_cols=224 Identities=15% Similarity=0.156 Sum_probs=148.2
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002402 88 EAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 167 (927)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVI 167 (927)
+..+.|++|.++ |.+.|. ++++++ ||.++++++| .++++| +..|++
T Consensus 6 ~~~~~l~~Lv~~-~s~sg~--e~~~~~-~l~~~l~~~g------~~~~~d------------------------~~gnli 51 (346)
T 1vho_A 6 ETGKLLMELSNL-DGPSGY--ETNVVS-YIKSVIEPFV------DEAKTT------------------------RHGSLI 51 (346)
T ss_dssp CHHHHHHHHHHS-CCBTTC--CHHHHH-HHHHHHGGGC------SEEEEC------------------------TTSCEE
T ss_pred HHHHHHHHHHcC-CCCCcc--hHHHHH-HHHHHHHhhC------CEEEEe------------------------cCCcEE
Confidence 456789999996 555553 336788 9999999998 345443 235999
Q ss_pred EEEcCCCCCcCCCCEEEEEeecccccC---------------------------------C-------------------
Q 002402 168 LRIQPKYASEAAENAILVSSHIDTVFA---------------------------------A------------------- 195 (927)
Q Consensus 168 a~i~G~~~~~~~~~~VLl~AHyDSv~~---------------------------------s------------------- 195 (927)
+++.|+ ..+.|+++||+|+++. .
T Consensus 52 a~~~g~-----~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~ 126 (346)
T 1vho_A 52 GYKKGK-----GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSES 126 (346)
T ss_dssp EEECCS-----SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHH
T ss_pred EEEcCC-----CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhh
Confidence 999774 2368999999999941 0
Q ss_pred ----------------------CC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 002402 196 ----------------------EG-------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGE 234 (927)
Q Consensus 196 ----------------------pG-------------------A~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aE 234 (927)
.| +.||..|+++++++++.+.+. .++.++.++|+..|
T Consensus 127 ~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~--~~~~~~~~~~t~~E 204 (346)
T 1vho_A 127 RKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRY--DHPWDVYVVFSVQE 204 (346)
T ss_dssp HHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEECTT
T ss_pred cccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhc--CCCceEEEEEECCc
Confidence 11 478999999999999999764 35689999999999
Q ss_pred CCCccchHHHHhcCCccCCceEEEEeccCCCCCCcc----------cee--cCCCHHHHHHHHHHhcCCCCcchhhhhhc
Q 002402 235 EEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSG----------LFQ--AGPHPWAVENFAAAAKYPSGQVTAQDLFA 302 (927)
Q Consensus 235 E~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG~~~----------lfq--~g~~~~li~~y~~~a~~p~~~~l~~e~f~ 302 (927)
|.|+.|++.... .. +...+|.+|.+..++... .+. ...++.+++...++++. .+.. +|
T Consensus 205 EvG~~Ga~~~~~--~i--~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~-~gi~-----~~ 274 (346)
T 1vho_A 205 ETGCLGALTGAY--EI--NPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKK-HNVS-----LQ 274 (346)
T ss_dssp SSSHHHHHHTTC--CC--CCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHH-TTCC-----CE
T ss_pred ccchhhHHHHhc--cc--CCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHH-CCCC-----EE
Confidence 999999987542 22 224567777766542110 011 11356666666555432 1111 11
Q ss_pred cCCCC--CCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcC
Q 002402 303 SGAIT--SATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS 367 (927)
Q Consensus 303 ~g~ip--s~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~s 367 (927)
....+ .+||...+.. ..|+|.+++.-- . ...|++ .|.++.+.+.+..+.+.+++..+...
T Consensus 275 ~~~~~g~ggsDa~~~~~~~~gipt~~lg~~-~-~~~Hs~---~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 275 EEAVGGRSGTETDFVQLVRNGVRTSLISIP-L-KYMHTP---VEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp EESSCCC----CTTHHHHHTTCEEEEEEEE-C-BSTTST---TEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred EEeCCCCCCchHHHHHHhCCCCcEEEEehh-h-cccccH---HHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 11122 6799988842 379999987543 2 348987 45778899999999999999887653
No 34
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.18 E-value=9.7e-11 Score=133.42 Aligned_cols=126 Identities=16% Similarity=0.093 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhcCCC-------CCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccc
Q 002402 86 EFEAIKHVKALTELGPH-------PVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTL 158 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr-------~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 158 (927)
.+++.+.|++|.++... +..|.++.++++ ||.++++++| ++++.|
T Consensus 8 ~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~-~i~~~l~~~G------~~v~~~--------------------- 59 (423)
T 1z2l_A 8 RQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQ-QFKKRMAASG------LETRFD--------------------- 59 (423)
T ss_dssp HHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHH-HHHHHHHHTT------CEEEEC---------------------
T ss_pred HHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHH-HHHHHHHHcC------CEEEEe---------------------
Confidence 57899999999987432 122355668899 9999999998 455432
Q ss_pred cccccceEEEEEcCCCCCcCCCCEEEEEeecccccCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC--
Q 002402 159 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEE-- 236 (927)
Q Consensus 159 ~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~-- 236 (927)
...|++++++|+ ....+.|++.+|+|+|+. .|..|+..|++++|++++.|++.+.+++++|+|+|+.+||.
T Consensus 60 ---~~gnv~a~~~g~---~~~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~ 132 (423)
T 1z2l_A 60 ---EVGNLYGRLNGT---EYPQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSR 132 (423)
T ss_dssp ---TTSCEEEEECCS---SEEEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCS
T ss_pred ---cCCcEEEEEcCC---CCCCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccc
Confidence 124999999874 122378999999999985 48899999999999999999987777899999999999998
Q ss_pred ---CccchHHHHh
Q 002402 237 ---GLNGAHSFVT 246 (927)
Q Consensus 237 ---Gl~GS~~fv~ 246 (927)
|+.||+.+..
T Consensus 133 ~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 133 FPYVFWGSKNIFG 145 (423)
T ss_dssp SSCSCHHHHHHTT
T ss_pred cCCCcccHHHHHc
Confidence 5779999885
No 35
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.17 E-value=8.8e-11 Score=131.50 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=105.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHH-HHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002402 85 SEFEAIKHVKALTELGPHPVGSDALD-RALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 163 (927)
Q Consensus 85 s~~rA~~~L~~L~~igpr~~GS~~n~-~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 163 (927)
+.+++.+.+++|.++ |-+...++++ ++.+ ||.++|+++| ++++.+ .
T Consensus 4 ~~~~~~~~l~~l~~i-ps~s~~~~~e~~~~~-~l~~~l~~~G------~~~~~~-------------------------~ 50 (364)
T 2rb7_A 4 SMQHIVELTSDLIRF-PSMHSRPEQISRCAG-FIMDWCAQNG------IHAERM-------------------------D 50 (364)
T ss_dssp HHHHHHHHHHHHHTS-CCCTTCHHHHHHHHH-HHHHHHHHTT------CCCEEE-------------------------E
T ss_pred cHHHHHHHHHHHHcC-CCCCCCcchHHHHHH-HHHHHHHHcC------CeEEEe-------------------------c
Confidence 357888999999985 4444334554 7888 9999999998 344432 1
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEEeecccccC---------------CCCCCCChhHHHHHHHHHHHHHhcCCCC---CCc
Q 002402 164 NHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------AEGAGDCSSCVAVMLELARAMSQWAHGF---KNA 225 (927)
Q Consensus 164 ~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------spGA~Dn~sGVA~mLElaR~L~~~~~~p---~~~ 225 (927)
.|+++++.|+. ..+++.|++.+|+|+++. +.|+.|+.+|+|++|++++.|.+.+.++ +++
T Consensus 51 ~~~~~~~~~~~--~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~ 128 (364)
T 2rb7_A 51 HDGIPSVMVLP--EKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKD 128 (364)
T ss_dssp ETTEEEEEECS--BTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CCCceEEEEEc--CCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 36677776531 124578999999999974 3679999999999999999999865445 457
Q ss_pred --EEEEEeCCCCC-CccchHHHHhcCCccCCceEEEEecc
Q 002402 226 --VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEA 262 (927)
Q Consensus 226 --IvFlf~~aEE~-Gl~GS~~fv~~h~~~~~i~a~INLD~ 262 (927)
|+|+|+.+||. |+.|++.++++. +..+++++|.
T Consensus 129 ~~v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 129 MALGLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp CCEEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred ccEEEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 99999999996 789999998764 4567777664
No 36
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.15 E-value=1.8e-10 Score=128.66 Aligned_cols=139 Identities=22% Similarity=0.220 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 166 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 166 (927)
+++.+.+++|.++ |-+ |..+.++.+ ||.++|+++|.. .++++. ...|+
T Consensus 13 ~~~~~~~~~l~~~-ps~--s~~e~~~~~-~l~~~l~~~G~~-----~~~~~~-----------------------~~~~~ 60 (369)
T 3tx8_A 13 GDPIVLTQRLVDI-PSP--SGQEKQIAD-EIEDALRNLNLP-----GVEVFR-----------------------FNNNV 60 (369)
T ss_dssp SCHHHHHHHHHSS-CCB--TTCTHHHHH-HHHHHHHTTTCT-----TCEEEE-----------------------ETTEE
T ss_pred HHHHHHHHHHhcC-CCC--CccHHHHHH-HHHHHHHhcCCC-----CcEEec-----------------------cCCcE
Confidence 4678889999985 333 334457889 999999999721 133321 12589
Q ss_pred EEEEcCCCCCcCCCCEEEEEeecccccC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 002402 167 VLRIQPKYASEAAENAILVSSHIDTVFA--------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNT 232 (927)
Q Consensus 167 Ia~i~G~~~~~~~~~~VLl~AHyDSv~~--------------spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~ 232 (927)
+++++++ +++.|++.+|+|+++. +.|+.|+.+|+|++|++++.|++. ..++.+|.|+|..
T Consensus 61 ~a~~~~~-----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~ 134 (369)
T 3tx8_A 61 LARTNRG-----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYE 134 (369)
T ss_dssp EEECCCC-----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEEC
T ss_pred EEEecCC-----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEe
Confidence 9999763 3578999999999985 389999999999999999999864 4678999999999
Q ss_pred CCCCCc--cchHHHHhcCCccCCceEEEEeccC
Q 002402 233 GEEEGL--NGAHSFVTQHPWSTTIRVAIDLEAM 263 (927)
Q Consensus 233 aEE~Gl--~GS~~fv~~h~~~~~i~a~INLD~~ 263 (927)
+||.|. .|++.++++++...+...+|+.|..
T Consensus 135 ~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 135 CEEVADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp CCSSCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred ccccCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 999987 7999999877432355677887754
No 37
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.14 E-value=4.2e-10 Score=124.91 Aligned_cols=218 Identities=18% Similarity=0.218 Sum_probs=148.6
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEE
Q 002402 91 KHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRI 170 (927)
Q Consensus 91 ~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVIa~i 170 (927)
+.|++|.++ |.+.|.+ +++++ ||.++++++| .++++| +..|+++++
T Consensus 7 ~~l~~Lv~~-~s~sg~e--~~~~~-~l~~~l~~~g------~~v~~d------------------------~~gnlia~~ 52 (348)
T 1ylo_A 7 SLLKALSEA-DAIASSE--QEVRQ-ILLEEAARLQ------KEVRFD------------------------GLGSVLIRL 52 (348)
T ss_dssp HHHHHHHHS-CCBTTBC--HHHHH-HHHHHHHHTT------CCEEEC------------------------TTCCEEEEC
T ss_pred HHHHHHHcC-CCCCCch--HHHHH-HHHHHHHhhC------CEEEEe------------------------cCCCEEEEe
Confidence 678999986 5555533 36788 9999999998 345443 235899998
Q ss_pred cCCCCCcCCCCEEEEEeecccccC--------------------------------------------------------
Q 002402 171 QPKYASEAAENAILVSSHIDTVFA-------------------------------------------------------- 194 (927)
Q Consensus 171 ~G~~~~~~~~~~VLl~AHyDSv~~-------------------------------------------------------- 194 (927)
+|+ ..+.|+++||+|+++.
T Consensus 53 ~g~-----~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~ 127 (348)
T 1ylo_A 53 NES-----TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMR 127 (348)
T ss_dssp CCC-----SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEE
T ss_pred cCC-----CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEE
Confidence 763 3467999999999850
Q ss_pred ----------------CCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCc
Q 002402 195 ----------------AEG--------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGL 238 (927)
Q Consensus 195 ----------------spG--------------------A~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl 238 (927)
..| +.||..|+++++++++.+.+. .++.++.++++.+||.|+
T Consensus 128 id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~ 205 (348)
T 1ylo_A 128 VDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGL 205 (348)
T ss_dssp EECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCCTTSS
T ss_pred EEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEEcccccch
Confidence 112 478999999999999998764 366899999999999999
Q ss_pred cchHHHHhcCCccCCceEEEEeccCCCCCCc---------------ccee-cC--CCHHHHHHHHHHhc---CCCCcchh
Q 002402 239 NGAHSFVTQHPWSTTIRVAIDLEAMGIGGKS---------------GLFQ-AG--PHPWAVENFAAAAK---YPSGQVTA 297 (927)
Q Consensus 239 ~GS~~fv~~h~~~~~i~a~INLD~~G~gG~~---------------~lfq-~g--~~~~li~~y~~~a~---~p~~~~l~ 297 (927)
.|++...... .....|++|++..++.. +... .. .++.+++...+.++ .|...
T Consensus 206 ~Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~~--- 278 (348)
T 1ylo_A 206 RGGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQA--- 278 (348)
T ss_dssp HHHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCEE---
T ss_pred hHHHHhhccc----CCCEEEEEeccccCCCCCCCccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE---
Confidence 9988765321 22467888887653211 1110 11 24566665555432 22211
Q ss_pred hhhhccCCCCCCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 002402 298 QDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 366 (927)
Q Consensus 298 ~e~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~ 366 (927)
+. ..+.+||...+.. ..|+|.+++.- .. ...||+ .|.++.+.+....+.+.+++..+..
T Consensus 279 -~~----~~~ggsDa~~~~~~~~gipt~~lg~-~~-~~~Hs~---~E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 279 -DM----FSNGGTDGGAVHLTGTGVPTLVMGP-AT-RHGHCA---ASIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp -EE----CSSCCCHHHHHHTSTTCCCEEEEEC-CC-BSCSSS---CEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred -ee----cCCCcchHHHHHHhcCCCCEEEECc-cc-CcCCCc---ceEeeHHHHHHHHHHHHHHHHHhhH
Confidence 01 1246899999853 26999997643 33 458997 4567788899999988888887643
No 38
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.10 E-value=2.8e-10 Score=128.74 Aligned_cols=153 Identities=18% Similarity=0.250 Sum_probs=110.4
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccc
Q 002402 81 KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIY 160 (927)
Q Consensus 81 ~~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y 160 (927)
.-+.+.++..+.+++|.++ |-+ |..+.++++ ||.++|+++| ++++.+..... ..
T Consensus 18 ~~~~~~~~~~~~l~~L~~i-ps~--s~~E~~~~~-~l~~~l~~~G------~~v~~~~~~~~----------------~~ 71 (396)
T 3rza_A 18 QGMINEQRLLNTFLELVQI-DSE--TGNESTIQP-ILKEKFIALG------LDVKEDEAAKH----------------PK 71 (396)
T ss_dssp -CCSCHHHHHHHHHHHHTS-CCB--TTCTTTHHH-HHHHHHHHTT------CEEEECSGGGS----------------TT
T ss_pred EEeecHHHHHHHHHHHeec-CCC--CcCHHHHHH-HHHHHHHHCC------CEEEEeccccc----------------cC
Confidence 3467889999999999986 333 434457899 9999999998 55655421000 00
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEEeecccccC---------------CCCC----CCChhHHHHHHHHHHHHHhcCCC
Q 002402 161 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------AEGA----GDCSSCVAVMLELARAMSQWAHG 221 (927)
Q Consensus 161 ~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------spGA----~Dn~sGVA~mLElaR~L~~~~~~ 221 (927)
....||+++++|+. +..+.+.|++.||+|+++. +.|+ .||..|+|++|++++.|++.+.
T Consensus 72 ~~~~nvia~~~g~~-~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~- 149 (396)
T 3rza_A 72 LGANNLVCTMNSTI-EEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI- 149 (396)
T ss_dssp CSSCCEEEEECCCC-C---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCceEEEEECCcC-CCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-
Confidence 13579999998730 0134678999999999963 3566 4999999999999999988753
Q ss_pred CCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCC
Q 002402 222 FKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 264 (927)
Q Consensus 222 p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G 264 (927)
++.+|.|+|+.+||.|..|++.+..+. .+....+.+|..+
T Consensus 150 ~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 189 (396)
T 3rza_A 150 PHGQIQFVITVGEESGLIGAKELNSEL---LDADFGYAIDASA 189 (396)
T ss_dssp CCCCEEEEEESCGGGTSHHHHHCCGGG---CCCSEEEEEEESS
T ss_pred CCCCEEEEEEcccccccHhHhhhchhh---cccceEEEEecCC
Confidence 678999999999999999999886432 1234566666543
No 39
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.10 E-value=3.4e-10 Score=127.77 Aligned_cols=141 Identities=18% Similarity=0.203 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002402 86 EFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 165 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 165 (927)
.++..+.+++|.++ | .-|..+.++++ ||.++|+++| ++++... . .+..|
T Consensus 5 ~~~~~~~l~~lv~~-p--s~s~~e~~~~~-~l~~~l~~~G------~~~~~~~--~-------------------~~~~n 53 (393)
T 1vgy_A 5 ETQSLELAKELISR-P--SVTPDDRDCQK-LMAERLHKIG------FAAEEMH--F-------------------GNTKN 53 (393)
T ss_dssp CSHHHHHHHHHHTS-C--CBTTCCTTHHH-HHHHHHHTTT------CEEEECC--B-------------------TTBCE
T ss_pred hHHHHHHHHHHhcC-C--CCCCCcHHHHH-HHHHHHHHcC------CcEEEEe--c-------------------CCCcE
Confidence 45788999999984 3 33333446788 9999999998 4554321 0 13469
Q ss_pred EEEEEcCCCCCcCCCCEEEEEeecccccC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 002402 166 IVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKN 224 (927)
Q Consensus 166 VIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------------spGA~Dn~sGVA~mLElaR~L~~~~~~p~~ 224 (927)
+++++ |+ +++.|++.+|+|+||. +.|+.|+..|++++|++++.+.+.+.++++
T Consensus 54 v~a~~-g~-----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~ 127 (393)
T 1vgy_A 54 IWLRR-GT-----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQG 127 (393)
T ss_dssp EEEEE-CS-----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred EEEEE-CC-----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCC
Confidence 99998 63 3578999999999975 257889999999999999999887667899
Q ss_pred cEEEEEeCCCCC-CccchHHHHhcCCc-cCCceEEEEeccC
Q 002402 225 AVIFLFNTGEEE-GLNGAHSFVTQHPW-STTIRVAIDLEAM 263 (927)
Q Consensus 225 ~IvFlf~~aEE~-Gl~GS~~fv~~h~~-~~~i~a~INLD~~ 263 (927)
+|+|+|+.+||. ++.|++.+++.... ..++.+++..|..
T Consensus 128 ~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 128 SIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred cEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 999999999998 47899988753221 1245566666643
No 40
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.09 E-value=1.4e-09 Score=125.59 Aligned_cols=126 Identities=15% Similarity=0.141 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCH----------HHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccc
Q 002402 86 EFEAIKHVKALTELGPHPVGSD----------ALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMG 155 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~----------~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~ 155 (927)
.+++.+.+++|.++ |.+.+.+ +..++.+ ||.++++++| ++++..
T Consensus 13 ~~~~~~~l~~l~~i-ps~s~~~~~~~~~p~~~~~~~~~~-~l~~~l~~~G------~~~~~~------------------ 66 (470)
T 1lfw_A 13 KDAILKDLEELIAI-DSSEDLENATEEYPVGKGPVDAMT-KFLSFAKRDG------FDTENF------------------ 66 (470)
T ss_dssp HHHHHHHHHHHHTS-CCBCCGGGCCSSSTTCHHHHHHHH-HHHHHHHHTT------CEEEEE------------------
T ss_pred HHHHHHHHHHHcCC-CCcCCCccccccCCCcHHHHHHHH-HHHHHHHHcC------CeEEEe------------------
Confidence 57889999999986 4444432 3458899 9999999998 444421
Q ss_pred ccccccccceEEEEEcCCCCCcCCCCEEEEEeecccccC--------------------CCCCCCChhHHHHHHHHHHHH
Q 002402 156 RTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------------AEGAGDCSSCVAVMLELARAM 215 (927)
Q Consensus 156 ~~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~--------------------spGA~Dn~sGVA~mLElaR~L 215 (927)
...++++++ |+ .++.|++.+|+|+||. +.|+.||..|+|++|++++.|
T Consensus 67 ------~~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l 134 (470)
T 1lfw_A 67 ------ANYAGRVNF-GA-----GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLL 134 (470)
T ss_dssp ------TTTEEEEEE-CC-----CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHH
T ss_pred ------cCeEEEEEe-CC-----CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHH
Confidence 113567777 53 2478999999999863 357799999999999999999
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCC
Q 002402 216 SQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHP 249 (927)
Q Consensus 216 ~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~ 249 (927)
++.+.+++++|+|+|+.+||.|..|++.+++++.
T Consensus 135 ~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 135 KEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp HHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred HHcCCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 9877778999999999999999999999997654
No 41
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.08 E-value=1.4e-09 Score=121.81 Aligned_cols=225 Identities=21% Similarity=0.196 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 166 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 166 (927)
.+.++.|++|+++ |.++|.+ +++++ |+.+++++++ .++++| +..|+
T Consensus 3 ~~~~~~l~~L~~i-ps~SG~E--~~v~~-~l~~~l~~~g------~~~~~D------------------------~~GNl 48 (355)
T 3kl9_A 3 TTLFSKIKEVTEL-AAVSGHE--APVRA-YLREKLTPHV------DEVVTD------------------------GLGGI 48 (355)
T ss_dssp HHHHHHHHHHHTS-CCBTTCC--HHHHH-HHHHHHGGGS------SEEEEC------------------------TTSCE
T ss_pred HHHHHHHHHHHhC-CCCCCCH--HHHHH-HHHHHHHHhC------CEEEEC------------------------CCCeE
Confidence 3678899999995 6777754 46788 9999999998 355543 34599
Q ss_pred EEEEcCCCCCcCCCCEEEEEeecccccC--------C-------------------------------------------
Q 002402 167 VLRIQPKYASEAAENAILVSSHIDTVFA--------A------------------------------------------- 195 (927)
Q Consensus 167 Ia~i~G~~~~~~~~~~VLl~AHyDSv~~--------s------------------------------------------- 195 (927)
+++++|+ ..+.+.|++.||+|+++. +
T Consensus 49 i~~~~g~---~~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~ 125 (355)
T 3kl9_A 49 FGIKHSE---AVDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTR 125 (355)
T ss_dssp EEEECCC---STTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC--------
T ss_pred EEEECCc---CCCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccC
Confidence 9999875 114578999999999852 0
Q ss_pred ----------------------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 002402 196 ----------------------------------------------------EGAGDCSSCVAVMLELARAMSQWAHGFK 223 (927)
Q Consensus 196 ----------------------------------------------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~ 223 (927)
..+-||.+||+++||++|.+++. .++
T Consensus 126 ~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~ 203 (355)
T 3kl9_A 126 GKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLG 203 (355)
T ss_dssp -------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCS
T ss_pred hhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCC
Confidence 24778999999999999998753 578
Q ss_pred CcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCCCCC-----------Cccceec-C--CCHHHHHHHHHHhc
Q 002402 224 NAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG-----------KSGLFQA-G--PHPWAVENFAAAAK 289 (927)
Q Consensus 224 ~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG-----------~~~lfq~-g--~~~~li~~y~~~a~ 289 (927)
+++.++|++.||.|+.|++...... .. ..+|.+|+.-++. ..+-... + .++.+.+...+.++
T Consensus 204 ~~v~~~ft~qEEvG~~Ga~~a~~~~--~p--d~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~ 279 (355)
T 3kl9_A 204 NELYLGSNVQEEVGLRGAHTSTTKF--DP--EVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAE 279 (355)
T ss_dssp SEEEEEEESCCTTTSHHHHHHHHHH--CC--SEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHH
T ss_pred ceEEEEEECccccCcchhHHHHhcc--CC--CEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999998876432 12 3478888754332 2221211 2 25777777666543
Q ss_pred CCCCcchhhhhhccCCCCCCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHh
Q 002402 290 YPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAA 365 (927)
Q Consensus 290 ~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la 365 (927)
. .+-. .+.... ..+||...+.. ..|+|..++..- ..+.||+. |.++.+.+.+..+.+.++++.+.
T Consensus 280 ~-~gIp-~q~~~~----ggGtDa~~i~~a~~Gipt~~igvp--~~~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 280 E-AGIK-YQYYCG----KGGTDAGAAHLKNGGVPSTTIGVC--ARYIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp H-TTCC-EEEEEC----SSCCTHHHHTTSTTCCCEEEEEEE--EBSCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred H-cCCC-EEEECC----CcchHHHHHHHhCCCCCEEEEccC--cCCCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 2 1110 011111 25899988764 268999987642 23488876 67778888888888888887764
No 42
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.07 E-value=3.1e-10 Score=129.14 Aligned_cols=137 Identities=15% Similarity=0.183 Sum_probs=102.6
Q ss_pred HHHHHHHHHHhcCCCCCC--------CHHHHHHHHHHHHHHHHhhccccCCcee-EEEEEEeccCCcccccccccccccc
Q 002402 88 EAIKHVKALTELGPHPVG--------SDALDRALQVYVFAAAQKIKETKHWEVD-VEVDFFHAKSGANRLVSGAFMGRTL 158 (927)
Q Consensus 88 rA~~~L~~L~~igpr~~G--------S~~n~~a~~~yL~~~l~~ig~~~~~~~~-vevd~f~~~~g~~~~~g~~~~~~~~ 158 (927)
++.+.|++|.++. -+.| ++++.++++ ||.++|+++| ++ ++++
T Consensus 3 ~~~~~l~~Lv~i~-s~s~~~~~~~p~~~~e~~~~~-~l~~~l~~~G------~~~~~~~--------------------- 53 (417)
T 1fno_A 3 KLLERFLHYVSLD-TQSKSGVRQVPSTEGQWKLLR-LLKQQLEEMG------LVNITLS--------------------- 53 (417)
T ss_dssp SHHHHHHHHHTSC-CBCCSSCSSSSSSHHHHHHHH-HHHHHHHHHT------CEEEEEC---------------------
T ss_pred HHHHHHHHhEEec-CCCCcccCCCCCCccHHHHHH-HHHHHHHHcC------CCeEEEC---------------------
Confidence 5778899999863 2333 345668899 9999999998 34 4332
Q ss_pred cccccceEEEEEcCCCCCcCCCCEEEEEeecccccCC------C------------------------------------
Q 002402 159 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------E------------------------------------ 196 (927)
Q Consensus 159 ~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s------p------------------------------------ 196 (927)
...||+++++|+. ..+.+.|++.+|+|++|.. |
T Consensus 54 ---~~~nvia~~~g~~--~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~ 128 (417)
T 1fno_A 54 ---EKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTL 128 (417)
T ss_dssp ---TTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCE
T ss_pred ---CCceEEEEECCCC--CCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcE
Confidence 2359999998741 1135789999999999642 1
Q ss_pred ----CC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccC
Q 002402 197 ----GA----GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 263 (927)
Q Consensus 197 ----GA----~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~ 263 (927)
|+ .||..|+|++|++++.|++.+ .++++|+|+|+.+||.| .|++.++.+. . +..+++++|..
T Consensus 129 l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 129 ITTDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred EEcCCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 22 788899999999999999876 67899999999999999 8998776321 2 34567777754
No 43
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.06 E-value=4.3e-10 Score=131.19 Aligned_cols=140 Identities=17% Similarity=0.256 Sum_probs=108.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002402 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 161 (927)
Q Consensus 82 ~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 161 (927)
.+++.++.++.+++|.++ |++.+. +.++.+ ||.++++++| ++++.|
T Consensus 9 ~~~~~~~~~~~~~~L~~i-ps~s~~--e~~~~~-~l~~~l~~~G------~~v~~~------------------------ 54 (490)
T 3mru_A 9 STLSPAPLWQFFDKICSI-PHPSKH--EEALAQ-YIVTWATEQG------FDVRRD------------------------ 54 (490)
T ss_dssp GGSSSHHHHHHHHHHHHS-CCBTTC--CTTHHH-HHHHHHHHTT------CEEEEC------------------------
T ss_pred hccCHHHHHHHHHHHhCC-CCCCCC--HHHHHH-HHHHHHHHcC------CEEEEc------------------------
Confidence 458889999999999996 666553 457889 9999999998 455432
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEEeecccccCC------------------------CCCC---CChhHHHHHHHHHHH
Q 002402 162 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------EGAG---DCSSCVAVMLELARA 214 (927)
Q Consensus 162 ~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s------------------------pGA~---Dn~sGVA~mLElaR~ 214 (927)
...||+++++|+. +..+.+.|++.+|+|+++.. .|+. ||+.|+|++|++++
T Consensus 55 ~~~nv~a~~~g~~-g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~- 132 (490)
T 3mru_A 55 PTGNVFIKKPATP-GMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA- 132 (490)
T ss_dssp TTCCEEEEECCCT-TCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH-
T ss_pred CCCeEEEEEcCCC-CCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH-
Confidence 2359999998741 11356789999999999753 4775 99999999999763
Q ss_pred HHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccC
Q 002402 215 MSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 263 (927)
Q Consensus 215 L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~ 263 (927)
+ ...++.+|.|+|+.+||.|+.|++.+++.. -+.+.++|+|..
T Consensus 133 --~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 --S-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp --C-SSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred --h-CCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2 345678999999999999999999998532 246788898853
No 44
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.04 E-value=1.3e-09 Score=121.57 Aligned_cols=139 Identities=19% Similarity=0.191 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 166 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 166 (927)
++..+.+++|.++ +.-|..+.++++ ||.++|+++| ++++... ..+..|+
T Consensus 3 ~~~~~~~~~L~~~---ps~s~~e~~~~~-~l~~~l~~~g------~~~~~~~---------------------~~~~~n~ 51 (377)
T 3isz_A 3 EKVVSLAQDLIRR---PSISPNDEGCQQ-IIAERLEKLG------FQIEWMP---------------------FNDTLNL 51 (377)
T ss_dssp HHHHHHHHHHHTS---CCBTTCCTTHHH-HHHHHHHHTT------CEEEECC---------------------BTTBCEE
T ss_pred hHHHHHHHHHhcC---CCCCCChhhHHH-HHHHHHHHCC------CceEEee---------------------cCCCceE
Confidence 5678899999984 333434456889 9999999998 4444320 0135799
Q ss_pred EEEEcCCCCCcCCCCEEEEEeecccccCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002402 167 VLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAHGFKNA 225 (927)
Q Consensus 167 Ia~i~G~~~~~~~~~~VLl~AHyDSv~~s---------------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~ 225 (927)
++++ |+ +++.|++.||+|++|.+ .|+.|+..|++++|++++.+.+.+.+++++
T Consensus 52 ~a~~-g~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~ 125 (377)
T 3isz_A 52 WAKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGT 125 (377)
T ss_dssp EEEE-ES-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSE
T ss_pred EEEe-CC-----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCce
Confidence 9988 53 35789999999999752 577899999999999999998876678899
Q ss_pred EEEEEeCCCCCCc-cchHHHHhcCCc-cCCceEEEEecc
Q 002402 226 VIFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAIDLEA 262 (927)
Q Consensus 226 IvFlf~~aEE~Gl-~GS~~fv~~h~~-~~~i~a~INLD~ 262 (927)
|+|+|..+||.|. .|++.+++.... ..++.+++..|.
T Consensus 126 v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~ 164 (377)
T 3isz_A 126 IALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEP 164 (377)
T ss_dssp EEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCC
T ss_pred EEEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCC
Confidence 9999999999976 699998753211 124556666554
No 45
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.01 E-value=2.4e-09 Score=124.83 Aligned_cols=127 Identities=17% Similarity=0.242 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCC----------HHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccc
Q 002402 86 EFEAIKHVKALTELGPHPVGS----------DALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMG 155 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS----------~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~ 155 (927)
.+++.+.+++|.++ |-+.+. ++..++.+ ||.++|+++| ++++..
T Consensus 33 ~~~~~~~l~~lv~i-ps~s~~e~~~~~~p~g~~~~~~~~-~l~~~l~~~G------~~~~~~------------------ 86 (492)
T 3khx_A 33 EDQIINDLKGLLAI-ESVRDDAKASEDAPVGPGPRKALD-YMYEIAHRDG------FTTHDV------------------ 86 (492)
T ss_dssp HHHHHHHHHHHHTS-CCCCCSSSCCSSSTTCHHHHHHHH-HHHHHHHHTT------CEEEEE------------------
T ss_pred HHHHHHHHHHHhcC-CCCCCCcccccccccchHHHHHHH-HHHHHHHHcC------CcceEe------------------
Confidence 57888899999986 333332 23458899 9999999998 444321
Q ss_pred ccccccccceEEEEEcCCCCCcCCCCEEEEEeecccccCC-------------------CCCCCChhHHHHHHHHHHHHH
Q 002402 156 RTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------------EGAGDCSSCVAVMLELARAMS 216 (927)
Q Consensus 156 ~~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s-------------------pGA~Dn~sGVA~mLElaR~L~ 216 (927)
.|+++.++.. ..++.|++.+|+|+||.+ +|+.||.+|++++|++++.|+
T Consensus 87 --------~~~~~~~~~g----~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~ 154 (492)
T 3khx_A 87 --------DHIAGRIEAG----KGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILE 154 (492)
T ss_dssp --------TTTEEEEEEE----CSSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHH
T ss_pred --------CCEEEEEEeC----CCCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHH
Confidence 1445455421 235789999999998752 589999999999999999999
Q ss_pred hcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCc
Q 002402 217 QWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPW 250 (927)
Q Consensus 217 ~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~ 250 (927)
+.+.+++++|+|+|..+||.|..|++.++++++.
T Consensus 155 ~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~ 188 (492)
T 3khx_A 155 DMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM 188 (492)
T ss_dssp HTTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC
T ss_pred HcCCCCCCCEEEEEECCccCCCcCHHHHHHhCcC
Confidence 8877889999999999999999999999988753
No 46
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.00 E-value=1.9e-09 Score=124.96 Aligned_cols=146 Identities=14% Similarity=0.184 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHhcCCCCCCC-------HH-HHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccc
Q 002402 87 FEAIKHVKALTELGPHPVGS-------DA-LDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTL 158 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS-------~~-n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 158 (927)
+++.+.+++|.++ |-..+. .+ ..++.+ |+.++|+++|.+ ..++++. .. .
T Consensus 18 ~~~~~~l~~lv~i-ps~s~~~~~~~~~~~~e~~~~~-~i~~~l~~~G~~---~~~~~~~--~~-------~--------- 74 (472)
T 3pfe_A 18 EEILPSLCDYIKI-PNKSPHFDAKWEEHGYMEQAVN-HIANWCKSHAPK---GMTLEIV--RL-------K--------- 74 (472)
T ss_dssp HTHHHHHHHHHTC-CCBCGGGCTTHHHHCHHHHHHH-HHHHHHHHTCCT---TCEEEEE--CC-------T---------
T ss_pred HHHHHHHHHHhCC-CCcCCCccccccccchHHHHHH-HHHHHHHHcCCC---CcceEEE--ec-------C---------
Confidence 4577888888885 222221 12 347888 999999999832 1233332 11 0
Q ss_pred cccccceEEEEEcCCCCCcCCCCEEEEEeecccccC---------------------CCCCCCChhHHHHHHHHHHHHHh
Q 002402 159 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQ 217 (927)
Q Consensus 159 ~y~~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~---------------------spGA~Dn~sGVA~mLElaR~L~~ 217 (927)
....||+++++|+ +++.|++.+|+|++|. +.|+.||..|+|++|++++.|++
T Consensus 75 --~~~~~v~a~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~ 147 (472)
T 3pfe_A 75 --NRTPLLFMEIPGQ-----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQ 147 (472)
T ss_dssp --TSCCEEEEEECCS-----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHH
T ss_pred --CCCcEEEEEEcCC-----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHH
Confidence 1246999999763 3578999999998763 26899999999999999999998
Q ss_pred cCCCCCCcEEEEEeCCCCCCccchHHHHhcCCc-cCCceEEEEeccC
Q 002402 218 WAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAIDLEAM 263 (927)
Q Consensus 218 ~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~-~~~i~a~INLD~~ 263 (927)
.+..+. +|+|+|..+||.|..|++.++++++. .+++.+++.+|..
T Consensus 148 ~~~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~ 193 (472)
T 3pfe_A 148 QGLPYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSG 193 (472)
T ss_dssp TTCCCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCB
T ss_pred cCCCCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCC
Confidence 766666 99999999999999999999976632 2467888888843
No 47
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.00 E-value=4.1e-10 Score=124.35 Aligned_cols=224 Identities=13% Similarity=0.075 Sum_probs=145.0
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002402 88 EAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 167 (927)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVI 167 (927)
+..+.|++|+++ |.+.|. ++.+++ ||.++++++|.+ +++|.... .+ .+..|++
T Consensus 18 ~~~~~l~~Lv~i-~s~sg~--e~~v~~-~l~~~l~~~g~~------v~~d~~~~-------~~----------~~~gnli 70 (321)
T 3cpx_A 18 QGMQLLKELCSI-HAPSGN--EEPLKD-FILEYIRSNAGS------WSYQPVIY-------AD----------NDLQDCI 70 (321)
T ss_dssp CHHHHHHHHHHS-CCBTTC--CHHHHH-HHHHHHHHHGGG------SSSCCEEE-------CS----------GGGTTCE
T ss_pred HHHHHHHHHHcC-CCCCCC--HHHHHH-HHHHHHHhhCCe------EEEccccc-------cc----------cCCccEE
Confidence 457889999996 555553 336688 999999999842 22221000 00 1246999
Q ss_pred EEEcCCCCCcCCCCEEEEEeeccccc-----------C---------------------------------------CCC
Q 002402 168 LRIQPKYASEAAENAILVSSHIDTVF-----------A---------------------------------------AEG 197 (927)
Q Consensus 168 a~i~G~~~~~~~~~~VLl~AHyDSv~-----------~---------------------------------------spG 197 (927)
++++| . +.|++.||+|+++ . .+|
T Consensus 71 a~~~g------~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~G 143 (321)
T 3cpx_A 71 VLVFG------N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRG 143 (321)
T ss_dssp EEEES------S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTT
T ss_pred EEecC------C-ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCC
Confidence 98854 2 4699999999983 0 122
Q ss_pred -------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEE
Q 002402 198 -------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAI 258 (927)
Q Consensus 198 -------------------A~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~I 258 (927)
+.||.+||+++||+++.+. + +.++|++.||.|+.|++....-....-+..++|
T Consensus 144 d~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~~~~~~i 215 (321)
T 3cpx_A 144 TEVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETFHVKQSL 215 (321)
T ss_dssp CEEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHHCCCEEE
T ss_pred CEEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccccCCCEEE
Confidence 6899999999999998753 2 999999999999999986321000012346789
Q ss_pred EeccCCCCC-------Cccce--ecCCCHHHHHHHHHHhcCCCCcchhhhhhccCCCCCCCchHHhhh-cCCCeEEEEEe
Q 002402 259 DLEAMGIGG-------KSGLF--QAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAY 328 (927)
Q Consensus 259 NLD~~G~gG-------~~~lf--q~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GIPgld~a~ 328 (927)
++|....+. ..+-. +..+++.+++...+.++. .+-....+. ..+.+||-..+.. ..|+|.+++.-
T Consensus 216 ~~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~q~~~----~~~GGsD~~~~~~s~~Gipt~~lG~ 290 (321)
T 3cpx_A 216 ICDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TDIPFQLEV----EGAGASDGRELQLSPYPWDWCFIGA 290 (321)
T ss_dssp ECCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SSCCEEEEE----CSSCCCHHHHHHHSSSCCBCCBEEC
T ss_pred EEeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cCCCEEEEe----CCCCCccHHHHHHhCCCCCEEEEch
Confidence 999876432 22111 111256777777776543 121111111 1457899888842 37999998764
Q ss_pred eCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 002402 329 TDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 363 (927)
Q Consensus 329 ~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~ 363 (927)
- ....||+. |.++.+.++...+.+.++++.
T Consensus 291 ~--~~~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 291 P--EKDAHTPN---ECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp E--EBSTTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred h--hcccchhh---hheeHHHHHHHHHHHHHHHHh
Confidence 3 34579865 556778888888888887765
No 48
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.00 E-value=4.8e-09 Score=119.59 Aligned_cols=134 Identities=16% Similarity=0.249 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002402 87 FEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 166 (927)
Q Consensus 87 ~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 166 (927)
++..+.+++|.++ |.+.+ .+.++.+ ||.++|+++| ++++.+. ...|+
T Consensus 28 ~~~i~~~~~l~~i-ps~s~--~e~~~~~-~l~~~l~~~G------~~v~~~~-----------------------~~~~l 74 (418)
T 1xmb_A 28 DWMVKIRRKIHEN-PELGY--EELETSK-LIRSELELIG------IKYRYPV-----------------------AITGV 74 (418)
T ss_dssp HHHHHHHHHHHHS-CCCTT--CCHHHHH-HHHHHHHHHT------CCEEEEE-----------------------TTTEE
T ss_pred HHHHHHHHHHHhC-CCCCC--ChHHHHH-HHHHHHHHcC------CeeEecc-----------------------CCcEE
Confidence 6788889999885 44443 3457889 9999999998 4555431 13599
Q ss_pred EEEEcCCCCCcCCCCEEEEEeecccccCCC-----------C----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 002402 167 VLRIQPKYASEAAENAILVSSHIDTVFAAE-----------G----AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFN 231 (927)
Q Consensus 167 Ia~i~G~~~~~~~~~~VLl~AHyDSv~~sp-----------G----A~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~ 231 (927)
+++++|+ .+ +.|++.+|+|++|.+. | .+.| .|+|++|++++.|++.+.+++++|+|+|+
T Consensus 75 ~a~~~~~----~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d-~~~a~~l~a~~~l~~~~~~~~~~v~~~~~ 148 (418)
T 1xmb_A 75 IGYIGTG----EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHD-GHVTMLLGAAKILHEHRHHLQGTVVLIFQ 148 (418)
T ss_dssp EEEEESS----SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHH-HHHHHHHHHHHHHHHTGGGCSSEEEEEEE
T ss_pred EEEEcCC----CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCch-HHHHHHHHHHHHHHhccccCCceEEEEEe
Confidence 9999764 23 7899999999998531 2 1112 79999999999999876678899999999
Q ss_pred CCCCCCccchHHHHhcCCccCCceEEEEec
Q 002402 232 TGEEEGLNGAHSFVTQHPWSTTIRVAIDLE 261 (927)
Q Consensus 232 ~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD 261 (927)
.+|| |..|++.++++... +++.++++++
T Consensus 149 ~~EE-g~~G~~~~~~~g~~-~~~d~~i~~~ 176 (418)
T 1xmb_A 149 PAEE-GLSGAKKMREEGAL-KNVEAIFGIH 176 (418)
T ss_dssp CCTT-TTCHHHHHHHTTTT-TTEEEEEEEE
T ss_pred cccc-ccccHHHHHHcCCc-CCCCEEEEEe
Confidence 9999 99999999965432 3456777653
No 49
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=98.96 E-value=2.6e-09 Score=124.21 Aligned_cols=140 Identities=16% Similarity=0.247 Sum_probs=105.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002402 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 161 (927)
Q Consensus 82 ~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 161 (927)
.+++.+++.+.+++|.++ |.+.+ .+.++++ ||.++++++| ++++.+
T Consensus 6 ~~~~~~~~~~~~~~l~~i-ps~s~--~e~~~~~-~l~~~l~~~G------~~~~~~------------------------ 51 (487)
T 2qyv_A 6 QSLQPKLLWQWFDQICAI-PHPSY--KEEQLAQ-FIINWAKTKG------FFAERD------------------------ 51 (487)
T ss_dssp CCSSSHHHHHHHHHHHHS-CCBTT--CCHHHHH-HHHHHHHHTT------CEEEEC------------------------
T ss_pred cccCHHHHHHHHHHHHcC-CCCCC--cHHHHHH-HHHHHHHHcC------CEEEEc------------------------
Confidence 356778999999999996 44443 3457899 9999999998 455432
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEEeecccccCC------------------------CCCC---CChhHHHHHHHHHHH
Q 002402 162 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------EGAG---DCSSCVAVMLELARA 214 (927)
Q Consensus 162 ~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s------------------------pGA~---Dn~sGVA~mLElaR~ 214 (927)
...|++++++|+. +..+.+.|++.+|+|++|.. .|+. ||..|+|++|++++.
T Consensus 52 ~~~nv~a~~~g~~-g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~ 130 (487)
T 2qyv_A 52 EVGNVLIRKPATV-GMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES 130 (487)
T ss_dssp TTCCEEEEECCCT-TCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEeCCCC-CCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh
Confidence 2359999998631 00245789999999999753 2776 999999999999973
Q ss_pred HHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccC
Q 002402 215 MSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 263 (927)
Q Consensus 215 L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~ 263 (927)
.+ .++++|.|+|+.+||.|..|++.++.+. . +..+++++|..
T Consensus 131 ---~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~ 172 (487)
T 2qyv_A 131 ---ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTE 172 (487)
T ss_dssp ---SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCC
T ss_pred ---CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccC
Confidence 23 4678999999999999999999988532 2 25667777764
No 50
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=98.92 E-value=3.8e-09 Score=118.29 Aligned_cols=130 Identities=19% Similarity=0.205 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHhcCCCCC--C-CHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccc
Q 002402 86 EFEAIKHVKALTELGPHPV--G-SDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD 162 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~--G-S~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 162 (927)
.+++.+.+++|.++ |... | ++++.++++ ||.++|+ | ++++.+... ..
T Consensus 8 ~~~~~~~l~~l~~i-ps~s~~~~~~~e~~~~~-~l~~~l~--G------~~~~~~~~~--------------------~~ 57 (369)
T 2f7v_A 8 LASTLEHLETLVSF-DTRNPPRAIAAEGGIFD-YLRAQLP--G------FQVEVIDHG--------------------DG 57 (369)
T ss_dssp HHHHHHHHHHHHHS-CCBTTTTCCCSSSHHHH-HHHTTCT--T------CEEEEEECS--------------------TT
T ss_pred hHHHHHHHHHHhCC-CCcCCCCCCccHHHHHH-HHHHHhC--C------CceEEEEcC--------------------CC
Confidence 46889999999986 3333 2 113447889 9999988 6 555554210 12
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEEeecccccC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 002402 163 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAMSQWAHGFK 223 (927)
Q Consensus 163 ~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~-------------------spGA~Dn~sGVA~mLElaR~L~~~~~~p~ 223 (927)
..|+++ ++|+ +.|++.+|+|++|. +.|+.||..|+|++|++++. ++
T Consensus 58 ~~~~~a-~~g~-------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~ 122 (369)
T 2f7v_A 58 AVSLYA-VRGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GD 122 (369)
T ss_dssp CEEEEE-EESC-------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CC
T ss_pred ceEEEE-EcCC-------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CC
Confidence 469999 8752 56999999999864 26899999999999999986 67
Q ss_pred CcEEEEEeCCCCC-CccchHHHHhcCCccCCceEEEEeccC
Q 002402 224 NAVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEAM 263 (927)
Q Consensus 224 ~~IvFlf~~aEE~-Gl~GS~~fv~~h~~~~~i~a~INLD~~ 263 (927)
++|+|+|+.+||. |+.|++.++++.. +..++|++|..
T Consensus 123 ~~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 123 GDAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CCEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CCEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 8999999999999 8999999997654 56778888865
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=98.91 E-value=9.7e-09 Score=116.52 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002402 86 EFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 165 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 165 (927)
.+++.+.+++|.++ |.+.+ .+.++.+ ||.++|+++| ++++.+. ....|
T Consensus 31 ~~~~i~~~~~l~~i-ps~s~--~e~~~~~-~l~~~l~~~G------~~v~~~~----------------------~~~~n 78 (404)
T 1ysj_A 31 HTRLINMRRDLHEH-PELSF--QEVETTK-KIRRWLEEEQ------IEILDVP----------------------QLKTG 78 (404)
T ss_dssp HHHHHHHHHHHHHS-CCCTT--CCHHHHH-HHHHHHHHTT------CEECCCT----------------------TCSSC
T ss_pred HHHHHHHHHHHHhc-CCCCC--ChHHHHH-HHHHHHHHcC------CceEEec----------------------cCCce
Confidence 46788889999885 44443 3457889 9999999998 4443220 02359
Q ss_pred EEEEEcCCCCCcCCCCEEEEEeecccccCCC-----------CC---CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 002402 166 IVLRIQPKYASEAAENAILVSSHIDTVFAAE-----------GA---GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFN 231 (927)
Q Consensus 166 VIa~i~G~~~~~~~~~~VLl~AHyDSv~~sp-----------GA---~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~ 231 (927)
|+++++|+ .+++.|++.+|+|++|.+. |. .|...|+|++|++++.|++.+.+++++|+|+|+
T Consensus 79 v~a~~~g~----~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~ 154 (404)
T 1ysj_A 79 VIAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQ 154 (404)
T ss_dssp EEEEEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEE
T ss_pred EEEEEeCC----CCCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEe
Confidence 99999874 2457899999999998531 21 112379999999999999866678899999999
Q ss_pred CCCCCCccchHHHHhcCCccCCceEEEEe
Q 002402 232 TGEEEGLNGAHSFVTQHPWSTTIRVAIDL 260 (927)
Q Consensus 232 ~aEE~Gl~GS~~fv~~h~~~~~i~a~INL 260 (927)
.+||. ..|++.++++. ..+++.+++.+
T Consensus 155 ~~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 155 PAEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp SCTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred ccccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 99998 78999999653 33345666665
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.86 E-value=2.7e-08 Score=111.42 Aligned_cols=220 Identities=18% Similarity=0.202 Sum_probs=148.5
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002402 88 EAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 167 (927)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVI 167 (927)
+.++.|++|+++ |.++|.+. .++++ |+.+++++++ .++++| +..|++
T Consensus 10 ~~~~~l~~L~~i-pspSG~E~-~~v~~-~l~~~l~~~g------~~~~~D------------------------~~GNvi 56 (354)
T 2vpu_A 10 VDWKLMQEIIEA-PGVSGYEH-LGIRD-IVVDVLKEVA------DEVKVD------------------------KLGNVI 56 (354)
T ss_dssp CCHHHHHHHHHS-CCBTTCGG-GTHHH-HHHHHHHTTC------SEEEEC------------------------TTCCEE
T ss_pred HHHHHHHHHHhC-CCCCcccH-HHHHH-HHHHHHHHhC------CEEEEc------------------------CCCeEE
Confidence 357889999995 77777554 25788 9999999988 355543 345888
Q ss_pred EEEcCCCCCcCCCCEEEEEeecccccC-----------------------------------------------------
Q 002402 168 LRIQPKYASEAAENAILVSSHIDTVFA----------------------------------------------------- 194 (927)
Q Consensus 168 a~i~G~~~~~~~~~~VLl~AHyDSv~~----------------------------------------------------- 194 (927)
++++|+ . +.|++.||+|+++.
T Consensus 57 ~~~~g~-----~-~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~ 130 (354)
T 2vpu_A 57 AHFKGS-----S-PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQ 130 (354)
T ss_dssp EEECCS-----S-SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC---
T ss_pred EEEcCC-----C-CEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCcc
Confidence 888663 1 57888888888752
Q ss_pred -------------------------------------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002402 195 -------------------------------------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNA 225 (927)
Q Consensus 195 -------------------------------------------------spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~ 225 (927)
...+-||-.||+++||+++.+++ ++.+
T Consensus 131 ~~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~ 206 (354)
T 2vpu_A 131 EDKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEAD 206 (354)
T ss_dssp ------CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSE
T ss_pred cccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCe
Confidence 03578899999999999998753 6799
Q ss_pred EEEEEeCCCCCCccchHHHHhcCCccCCceEEEEeccCCCCCCc--------c----cee-cCC-CHHHHHHHHHHhc--
Q 002402 226 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKS--------G----LFQ-AGP-HPWAVENFAAAAK-- 289 (927)
Q Consensus 226 IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG~~--------~----lfq-~g~-~~~li~~y~~~a~-- 289 (927)
+.++|++-||.|+.|++.-... ...+ .+|.+|+.-++.+. + ... ... ++.+.+...+.++
T Consensus 207 v~~~ft~qEEVG~~ga~~aa~~--i~pd--~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~ 282 (354)
T 2vpu_A 207 IYIVGSVQEEVGLRGARVASYA--INPE--VGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKY 282 (354)
T ss_dssp EEEEECSCCTTTSHHHHHHHHH--HCCS--EEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHT
T ss_pred EEEEEECCcccCccchhhhhcc--cCCC--EEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHHc
Confidence 9999999999999998865532 2222 46677764222111 0 111 122 5777776666543
Q ss_pred -CCCCcchhhhhhccCCCCCCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 002402 290 -YPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 366 (927)
Q Consensus 290 -~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~ 366 (927)
-|+-. ++.. -+.+||-..+.. ..|+|..++..- ....||+. |.++.+.+++..+.+.++++.+..
T Consensus 283 gIp~q~----~~~~---g~gGtDa~~i~~a~~Gipt~~Igvp--~~~~Hs~~---E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 283 EIPLQV----EPSP---RPTGTDANVMQINKEGVATAVLSIP--IRYMHSQV---ELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp TCCCEE----EECC---SCCSSTHHHHHTSTTCCEEEEEEEE--EBSTTSTT---CEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEE----EeCC---CCCccHHHHHHHhcCCCCEEEECcc--cccCcCcc---eEeeHHHHHHHHHHHHHHHHhccH
Confidence 22211 1110 125799988753 368999997643 22478874 566788888999999888887754
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.82 E-value=1.5e-08 Score=114.72 Aligned_cols=141 Identities=15% Similarity=0.119 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002402 86 EFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 165 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 165 (927)
.++..+.+++|.++ |.-|..+.++.+ ||.++|+++| ++++.+. .| ...|
T Consensus 15 ~~~~~~~~~~l~~~---pe~s~~E~~~~~-~i~~~l~~~G------~~v~~~~----------~g-----------~~~~ 63 (394)
T 3ram_A 15 KYSYIEISHRIHER---PELGNEEIFASR-TLIDRLKEHD------FEIETEI----------AG-----------HATG 63 (394)
T ss_dssp HHHHHHHHHHHHHS---CCCTTCCHHHHH-HHHHHHHHTT------CEEEEEE----------TT-----------EEEE
T ss_pred HHHHHHHHHHHHhC---CCCCcchHHHHH-HHHHHHHHcC------CeEEeCC----------CC-----------CceE
Confidence 35677888888874 344555568899 9999999998 5665541 01 2469
Q ss_pred EEEEEcCCCCCcCCCCEEEEEeecccccC-CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC-ccchH-
Q 002402 166 IVLRIQPKYASEAAENAILVSSHIDTVFA-AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEG-LNGAH- 242 (927)
Q Consensus 166 VIa~i~G~~~~~~~~~~VLl~AHyDSv~~-spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~G-l~GS~- 242 (927)
++++++|. .+++.|++.+|+|++|. ..|.+.|+- .+++|.+++.|++.+..++.+|.|+|+.+||.| ..|++
T Consensus 64 via~~~g~----~~g~~i~l~ah~D~vpg~~ha~G~d~~-~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~ 138 (394)
T 3ram_A 64 FIATYDSG----LDGPAIGFLAEYDALPGLGHACGHNII-GTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKA 138 (394)
T ss_dssp EEEEEECS----SSSCEEEEEECCCCCTTTSSTTCHHHH-HHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHH
T ss_pred EEEEEeCC----CCCCEEEEEEecccCCCcceECCccHH-HHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHH
Confidence 99999874 34589999999999972 122333443 467889999998765568899999999999998 58999
Q ss_pred HHHhcCCccCCceEEEEeccC
Q 002402 243 SFVTQHPWSTTIRVAIDLEAM 263 (927)
Q Consensus 243 ~fv~~h~~~~~i~a~INLD~~ 263 (927)
.++++. ..+++.+++.+|..
T Consensus 139 ~~~~~g-~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 139 SYVKAG-VIDQIDIALMIHPG 158 (394)
T ss_dssp HHHHHT-GGGGCSEEECCEEE
T ss_pred HHHHcC-CcccCCEEEEECCc
Confidence 777543 33457778877653
No 54
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.62 E-value=4.5e-07 Score=101.08 Aligned_cols=213 Identities=16% Similarity=0.229 Sum_probs=139.4
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEE
Q 002402 89 AIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVL 168 (927)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVIa 168 (927)
..+.|++|+++ |.|+|.+. ++++ |+.+++++++ .++++| +..||++
T Consensus 13 ~~~~l~~L~~~-pspSG~E~--~v~~-~i~~~l~~~~------~e~~~D------------------------~~Gnvi~ 58 (343)
T 3isx_A 13 MKELIRKLTEA-FGPSGREE--EVRS-IILEELEGHI------DGHRID------------------------GLGNLIV 58 (343)
T ss_dssp CHHHHHHHHHS-CCBTTCCH--HHHH-HHHHHHTTTC------SEEEEC------------------------TTCCEEE
T ss_pred HHHHHHHHHhC-CCCCCchH--HHHH-HHHHHHHHhC------CEEEEC------------------------CCCCEEE
Confidence 45778999995 77877543 6788 9999999998 355554 3468888
Q ss_pred EEcCCCCCcCCCCEEEEEeecccccC--------C---------------------------------------------
Q 002402 169 RIQPKYASEAAENAILVSSHIDTVFA--------A--------------------------------------------- 195 (927)
Q Consensus 169 ~i~G~~~~~~~~~~VLl~AHyDSv~~--------s--------------------------------------------- 195 (927)
++ |. +++.|++.||+|+++. +
T Consensus 59 ~~-g~-----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~ 132 (343)
T 3isx_A 59 WK-GS-----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVR 132 (343)
T ss_dssp EE-CC-----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHH
T ss_pred EE-CC-----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhccc
Confidence 87 42 3467999999999752 0
Q ss_pred -------------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 002402 196 -------------------------------------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNT 232 (927)
Q Consensus 196 -------------------------------------------pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~ 232 (927)
..+-||-.||+++||++|.++. ++++.++|++
T Consensus 133 ~~~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~ 207 (343)
T 3isx_A 133 KLSFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSV 207 (343)
T ss_dssp TCCGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEEC
T ss_pred CCCcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEEC
Confidence 2578999999999999998642 6899999999
Q ss_pred CCCCCccchHHHHhcCCccCCceEEEEeccCCCCC---------------Cccceec-CC--CHHHHHHHHHHhcCCCCc
Q 002402 233 GEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG---------------KSGLFQA-GP--HPWAVENFAAAAKYPSGQ 294 (927)
Q Consensus 233 aEE~Gl~GS~~fv~~h~~~~~i~a~INLD~~G~gG---------------~~~lfq~-g~--~~~li~~y~~~a~~p~~~ 294 (927)
-||.|+.|++.-.... ..+ .+|.+|+.-++. +.+-... +. ++.+++...+.++. .+-
T Consensus 208 qEEVG~~Ga~~aa~~i--~pd--~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~-~gI 282 (343)
T 3isx_A 208 QEEVGLVGASVAGYGV--PAD--EAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEK-FDI 282 (343)
T ss_dssp CCCTTSCCSTTTGGGC--CCS--EEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHH-TTC
T ss_pred CcccCchhHHHHhhcC--CCC--EEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHH-CCC
Confidence 9999999998665322 223 467777643221 1111111 11 35566655554431 010
Q ss_pred chhhhhhccCCC-CCCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHH
Q 002402 295 VTAQDLFASGAI-TSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFL 361 (927)
Q Consensus 295 ~l~~e~f~~g~i-ps~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv 361 (927)
.+|.... ..+||-..+.. ..|+|..++..- ..+.||+. |.++.+.+++..+.+.+++
T Consensus 283 -----p~Q~~v~~ggGTDa~~i~~a~~Gipt~~Igvp--~r~~Hs~~---E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 283 -----KYQMEVLTFGGTNAMGYQRTREGIPSATVSIP--TRYVHSPS---EMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp -----CCEECCCBCCCSSHHHHHHHTSSCCEEEEEEE--EBSTTSTT---EEECHHHHHHHHHHHHHHH
T ss_pred -----CeEEecCCCCchHHHHHHHhcCCCCEEEEccc--cccccchh---hEecHHHHHHHHHHHHHHH
Confidence 0121122 25899877643 369999998653 22478875 4566777777777766654
No 55
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.60 E-value=3.5e-07 Score=105.19 Aligned_cols=159 Identities=15% Similarity=0.141 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEE--Eecc--CCcc----------c-ccc
Q 002402 86 EFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDF--FHAK--SGAN----------R-LVS 150 (927)
Q Consensus 86 ~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~--f~~~--~g~~----------~-~~g 150 (927)
.++..+..++|-++ | .-|..+.++.+ ||.++|+++| ++++... .... -|.. + ..-
T Consensus 13 ~~~~~~~~~~lh~~-P--e~~~~E~~t~~-~i~~~L~~~G------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (445)
T 3io1_A 13 APSMTQWRRDFHLH-A--ESGWLEFRTAS-KVADILDGLG------YQLALGRDVIDADSRMGLPDEETLARAFERAREQ 82 (445)
T ss_dssp HHHHHHHHHHHHHT-C--CCTTCCHHHHH-HHHHHHHHTT------CEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhC-C--CCCCcHHHHHH-HHHHHHHHCC------CeEEecccccccccccccccchhhhhhhhhhccc
Confidence 35667777777773 3 33444557889 9999999998 4544321 0000 0000 0 000
Q ss_pred ccccccccccc--ccceEEEEEcCCCCCcCCCCEEEEEeecccccCC------------------CCCCC---ChhHHHH
Q 002402 151 GAFMGRTLIYS--DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------EGAGD---CSSCVAV 207 (927)
Q Consensus 151 ~~~~~~~~~y~--~~~NVIa~i~G~~~~~~~~~~VLl~AHyDSv~~s------------------pGA~D---n~sGVA~ 207 (927)
| ..+...... ...||++++.|. .+++.|++.+|+|++|.. +|..+ .-.++|+
T Consensus 83 g-~~~~~~~~~~~~~~~vva~~~~~----~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~ 157 (445)
T 3io1_A 83 G-APERWLPAFEGGFAGVVATLDTG----RPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAI 157 (445)
T ss_dssp T-CCTTTGGGGTTTCCCEEEEEECS----SCCCEEEEEEECCCCCC-------------------------CTTCTHHHH
T ss_pred c-ccccccccccCCCCEEEEEEeCC----CCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHH
Confidence 0 000000001 357999999874 346899999999999842 12111 0146999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcCCccCCceEEEEec
Q 002402 208 MLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLE 261 (927)
Q Consensus 208 mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h~~~~~i~a~INLD 261 (927)
+|++++.|++.+.+++.+|+|+|..+|| +..|++.++++. ..+++.+++.++
T Consensus 158 ~l~aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h 209 (445)
T 3io1_A 158 GLGLAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIH 209 (445)
T ss_dssp HHHHHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEE
T ss_pred HHHHHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEe
Confidence 9999999998766789999999999999 668999999653 334677777765
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.13 E-value=3.6e-05 Score=82.16 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=43.9
Q ss_pred CCCCchHHhhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcC
Q 002402 307 TSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS 367 (927)
Q Consensus 307 ps~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~s 367 (927)
+.+||-..|.. ..|+|.+.+.-- . ...||+. |+++.+.+.+..+.+.+++++|..-
T Consensus 294 ~ggTDa~~~~~~~~Giptv~~G~g-~-~~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 294 PTGTDANVMQINKEGVATAVLSIP-I-RYMHSQV---ELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp CCSSHHHHHHTSTTCCEEEEEEEE-E-BSTTSTT---CEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccccHHHHHHHhcCCCCEEEECcc-c-CCCCccc---EEEEHHHHHHHHHHHHHHHHhCccc
Confidence 56899888743 269999998754 2 3369975 6788899999999999999998654
No 57
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=94.45 E-value=0.028 Score=64.49 Aligned_cols=41 Identities=29% Similarity=0.358 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002402 84 FSEFEAIKHVKALT-ELGPHPVGSDALDRALQVYVFAAAQKIK 125 (927)
Q Consensus 84 fs~~rA~~~L~~L~-~igpr~~GS~~n~~a~~~yL~~~l~~ig 125 (927)
++.++++++|++|+ .+|+|..||++++++++ |+.++|+++|
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~-~i~~~l~~~G 59 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVD-WAIAKLQSLG 59 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHH-HHHHHHHHTT
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHH-HHHHHHHHcC
Confidence 45679999999999 59999999999999999 9999999998
No 58
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=91.01 E-value=0.32 Score=55.57 Aligned_cols=142 Identities=11% Similarity=0.022 Sum_probs=84.1
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcC-Cc-cCCc-------------eEEEE
Q 002402 195 AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-STTI-------------RVAID 259 (927)
Q Consensus 195 spGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h-~~-~~~i-------------~a~IN 259 (927)
...+-||-+||+++||+++.+. +...++.++| +-||.|..|++.-.... |. .+++ ..+|.
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is 304 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVS 304 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEE
T ss_pred EeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEE
Confidence 3578899999999999998764 3567888888 99999999988754321 21 1111 56888
Q ss_pred eccCCCC------------------CCcccee---c-CCCHHHHHHHHHH---hcCCCCcchhhhhhccCCCCCCCchHH
Q 002402 260 LEAMGIG------------------GKSGLFQ---A-GPHPWAVENFAAA---AKYPSGQVTAQDLFASGAITSATDFQV 314 (927)
Q Consensus 260 LD~~G~g------------------G~~~lfq---~-g~~~~li~~y~~~---a~~p~~~~l~~e~f~~g~ips~TD~~~ 314 (927)
.|++-+. |..+-.. . .+++.+...+.+. ..-|+-. ++.+ .-.+.+||-.+
T Consensus 305 ~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~----~~~~-~d~~gGsd~g~ 379 (428)
T 2ijz_A 305 ADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQS----FVTR-SDMGCGSTIGP 379 (428)
T ss_dssp ECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCB----CCCC-SSCCCCCCCST
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEE----EEEe-CCCCccchHHH
Confidence 8875542 1111110 1 1244444333322 2223321 1111 11356788777
Q ss_pred hhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHh
Q 002402 315 YKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPG 348 (927)
Q Consensus 315 F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~ 348 (927)
+.. ..|+|.+|+.. .--.-||+.-+...-|..
T Consensus 380 i~~~~~Gi~tvdiGi--p~~~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 380 ITASQVGVRTVDIGL--PTFAMHSIRELAGSHDLA 412 (428)
T ss_dssp TTGGGGSCCEEEECC--CCCSCSSSSCCCCSSHHH
T ss_pred HHHhCCCCCEEEEch--hhcccchHHHHhhHHHHH
Confidence 753 47999999864 233568887766655443
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=89.92 E-value=0.34 Score=55.69 Aligned_cols=152 Identities=11% Similarity=-0.002 Sum_probs=85.7
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHHHhcC-------------C--------ccCCce
Q 002402 197 GAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQH-------------P--------WSTTIR 255 (927)
Q Consensus 197 GA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h-------------~--------~~~~i~ 255 (927)
++-||-.||.++||+++.+ .++.++++++++-||.|..|++.-.... + .+-.-.
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l~~s 320 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVLENT 320 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHHHSC
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhhcCC
Confidence 6789999999999998865 3578999999999999988776432110 0 000113
Q ss_pred EEEEeccCCCC------------------CCccceecC---------CCHHHHHHHHHHh---cCCCCcchhhhhhccCC
Q 002402 256 VAIDLEAMGIG------------------GKSGLFQAG---------PHPWAVENFAAAA---KYPSGQVTAQDLFASGA 305 (927)
Q Consensus 256 a~INLD~~G~g------------------G~~~lfq~g---------~~~~li~~y~~~a---~~p~~~~l~~e~f~~g~ 305 (927)
.+|..|++-+. |+.+-..++ +++.+...+.+.+ .-|+-. ......-
T Consensus 321 ~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~Q~----~~~gr~d 396 (450)
T 2glf_A 321 SVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIWQV----ATLGKVD 396 (450)
T ss_dssp EEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCEEE----CCSSSTT
T ss_pred eEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCEEE----EEeccCC
Confidence 45555554321 111111112 2455554444432 223211 0110111
Q ss_pred CCCCCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHH
Q 002402 306 ITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLL 362 (927)
Q Consensus 306 ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~ 362 (927)
.+++||-.++....|+|.+|+.-- --+=||+.-+...-| +.+..+.+.+++.
T Consensus 397 ~~gGstig~i~a~~Gi~tvdiGiP--~l~MHS~~E~~~~~D---~~~~~~l~~af~~ 448 (450)
T 2glf_A 397 QGGGGTIAKFFAERGSDVIDMGPA--LLGMHSPFEISSKAD---LFETYVAYRSLME 448 (450)
T ss_dssp SCCCCCTHHHHHTTTSCEEEEECE--EBSTTSSSEEEEHHH---HHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHhCCCCcEEEechh--hcccchHHHHhhHHH---HHHHHHHHHHHHH
Confidence 456788777666689999999742 224599887765444 4455555555444
No 60
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=88.90 E-value=0.5 Score=57.26 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 002402 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQVYVFAAAQKIK 125 (927)
Q Consensus 82 ~~fs~~rA~~~L~~L~~igpr~~GS~~n~~a~~~yL~~~l~~ig 125 (927)
..+++++++++|++|++ .||..||+++.++++ |+.+++++.|
T Consensus 20 ~~~~~~~i~~~l~~lt~-~ph~aGt~~~~~~a~-yi~~~~~~~G 61 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTK-LPHLAGTEQNFLLAK-KIQTQWKKFG 61 (707)
T ss_dssp HHCCHHHHHHHHHHHSS-SCCCTTSHHHHHHHH-HHHHHHHHHT
T ss_pred HhCCHHHHHHHHHHHhc-CCCcCCCHhHHHHHH-HHHHHHHHcC
Confidence 46899999999999999 599999999999999 9999999998
No 61
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=82.79 E-value=0.4 Score=57.44 Aligned_cols=43 Identities=21% Similarity=0.231 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHhhcc
Q 002402 83 GFSEFEAIKHVKALTE--LGPHPVGSDALDRALQVYVFAAAQKIKE 126 (927)
Q Consensus 83 ~fs~~rA~~~L~~L~~--igpr~~GS~~n~~a~~~yL~~~l~~ig~ 126 (927)
.++++++++||+.|++ ++||..||++++++++ ||.++++++|.
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~-yI~~~f~~~Gl 58 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLAL-YVENQFREFKL 58 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHH-HHHHHHHHHTC
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH-HHHHHHHHcCC
Confidence 4567799999999998 5899999999999999 99999999994
No 62
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=74.22 E-value=3.7 Score=47.60 Aligned_cols=160 Identities=11% Similarity=-0.015 Sum_probs=85.1
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC---CCCCCcEEEEEeCCCCCCccchHHHHhcC-Cc-----------------cCCc
Q 002402 196 EGAGDCSSCVAVMLELARAMSQWA---HGFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-----------------STTI 254 (927)
Q Consensus 196 pGA~Dn~sGVA~mLElaR~L~~~~---~~p~~~IvFlf~~aEE~Gl~GS~~fv~~h-~~-----------------~~~i 254 (927)
.++-||-.||.++||+++.+.+.. .......++++++-||.|+.|++.-.... |. +-.-
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~~ 360 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIPK 360 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGGG
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhhc
Confidence 367899999999999998875310 00123444999999999987776532100 00 0012
Q ss_pred eEEEEeccCCCC------------------CCccceec----CCCHHHHHHHHHHh---cCCCCcchhhhhhccCCCC-C
Q 002402 255 RVAIDLEAMGIG------------------GKSGLFQA----GPHPWAVENFAAAA---KYPSGQVTAQDLFASGAIT-S 308 (927)
Q Consensus 255 ~a~INLD~~G~g------------------G~~~lfq~----g~~~~li~~y~~~a---~~p~~~~l~~e~f~~g~ip-s 308 (927)
..+|..|++-+. |+.+-+.. .+++.+...+.+.+ .-|+-.. +-+ .-.+ +
T Consensus 361 S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~----v~r-~D~~gG 435 (496)
T 3vat_A 361 SYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDL----MVR-NDSPCG 435 (496)
T ss_dssp CEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEE----CCC-TTSCCC
T ss_pred CeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEE----Eec-CCCCCc
Confidence 357777764221 12111111 13455544444332 3343211 101 1124 3
Q ss_pred CCchHHhhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHh
Q 002402 309 ATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAA 365 (927)
Q Consensus 309 ~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la 365 (927)
+|+-.+.....|||.+++.-- --+=||+.-+...-|.. +..+.+.++++.+.
T Consensus 436 gTig~i~~s~~Gi~tvdIGiP--~ryMHS~~E~~~~~D~~---~~v~Ll~af~~~~~ 487 (496)
T 3vat_A 436 TTIGPILASRLGLRVLDLGSP--QLAMHSIRETACTTGVL---QTITLFKGFFELFP 487 (496)
T ss_dssp CCHHHHHHHHHTCEEEEEECE--EESTTSSSEEEESHHHH---HHHHHHHHHHHHHH
T ss_pred chHHHHHhcccCCcEEEecHh--hhccccHHHHhhHHHHH---HHHHHHHHHHHhHH
Confidence 454444432379999999642 22459988777655544 55555555555544
No 63
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=71.50 E-value=1.2 Score=51.22 Aligned_cols=45 Identities=24% Similarity=0.237 Sum_probs=37.9
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHH
Q 002402 196 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSF 244 (927)
Q Consensus 196 pGA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~f 244 (927)
.++-||-.||.++||+++.+. .+++++++++++-||.|..|++.-
T Consensus 257 s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ga 301 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATGM 301 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTTS
T ss_pred EecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCcccccc
Confidence 357789999999999988653 467899999999999999888754
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=67.32 E-value=0.87 Score=52.42 Aligned_cols=45 Identities=22% Similarity=0.246 Sum_probs=32.0
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCccchHHH
Q 002402 197 GAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSF 244 (927)
Q Consensus 197 GA~Dn~sGVA~mLElaR~L~~~~~~p~~~IvFlf~~aEE~Gl~GS~~f 244 (927)
++-||-.||+++||+++.+.+ .+++++++++++-||.|..|++.-
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 577899999999999886532 467899999999999999888754
No 65
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=42.10 E-value=24 Score=24.43 Aligned_cols=18 Identities=17% Similarity=0.368 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002402 632 VILAVFIAVVLCLTLVYL 649 (927)
Q Consensus 632 ~~ia~~~a~~~~l~~~~l 649 (927)
-+||.++|+++++.|+|-
T Consensus 7 eviaglvalltflafgfw 24 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFW 24 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 588999999999999974
No 66
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=38.35 E-value=51 Score=28.21 Aligned_cols=60 Identities=17% Similarity=0.242 Sum_probs=46.8
Q ss_pred CCCCCCchHHhhhcCCCeEEEEEeeCC-CCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCC
Q 002402 305 AITSATDFQVYKEVAGLSGLDFAYTDK-SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASST 368 (927)
Q Consensus 305 ~ips~TD~~~F~~~~GIPgld~a~~~~-~~~YHT~~Dt~d~id~~slq~~g~~vl~lv~~la~s~ 368 (927)
..+..||-+.|+. .|+|.+.+.-... ...-|+.. |+++.+.+.+..+....+++.+.+.+
T Consensus 22 ~~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 22 IMPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp ECCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eeceeCcHHHHHH-cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcCC
Confidence 3567899999998 7999988764322 13457664 57788999999999999999998863
No 67
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=36.88 E-value=53 Score=26.49 Aligned_cols=36 Identities=22% Similarity=0.489 Sum_probs=16.8
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCch
Q 002402 623 GGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKR 660 (927)
Q Consensus 623 ~~~pd~l~d~~ia~~~a~~~~l~~~~l~P~~~~~~~~~ 660 (927)
...|-|+ .++|++.+++...+..+++=-+..|+|++
T Consensus 5 ~~vp~Wi--Ii~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 5 GRVPLWV--ILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp CCCCTHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccCchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 3477773 44444444333333334444445565543
No 68
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=28.54 E-value=31 Score=39.14 Aligned_cols=74 Identities=15% Similarity=0.094 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEEcCCCCCcCCCCEE
Q 002402 104 VGSDALDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAI 183 (927)
Q Consensus 104 ~GS~~n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVIa~i~G~~~~~~~~~~V 183 (927)
..|+..-.+++ ++.++|++.|-+.-.+. +.+.... |+ +.....+..|||+...|+.- ...++.+
T Consensus 13 ~~~~t~~h~v~-~~~~~l~~~Gf~~l~e~----~~w~l~~------g~----k~~~~~~~g~lia~~~G~~~-~~~~~~~ 76 (428)
T 2ijz_A 13 KASPTPFHATA-SLARRLEAAGYRRLDER----DAWHTET------GG----RYYVTRNDSSLIAIRLGRRS-PLESGFR 76 (428)
T ss_dssp TTTHHHHHHHC-CSHHHHHHHHHHHSCC------------------CC----CCEECTTTTCCEEEECC--C-CSTTCCE
T ss_pred HcCCCHHHHHH-HHHHHHHHcCCeEcccc----cccccCC------CC----EEEEECCCCEEEEEEECCcC-CCCCCcE
Confidence 45677778899 99999999985322211 1111111 11 01111234799999887520 1134689
Q ss_pred EEEeeccccc
Q 002402 184 LVSSHIDTVF 193 (927)
Q Consensus 184 Ll~AHyDSv~ 193 (927)
+++||.|+..
T Consensus 77 ii~AH~Dspg 86 (428)
T 2ijz_A 77 LVGAHTDSPC 86 (428)
T ss_dssp EEECBCCCSE
T ss_pred EEEEcCCcCC
Confidence 9999999973
No 69
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=25.14 E-value=90 Score=35.61 Aligned_cols=65 Identities=9% Similarity=-0.086 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHhhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEEcCCCCCcCCCCEEEEEee
Q 002402 109 LDRALQVYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSH 188 (927)
Q Consensus 109 n~~a~~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVIa~i~G~~~~~~~~~~VLl~AH 188 (927)
.-.+++ ++.++|++.|-+.-.+. +. -+ .|+ +.....+..|||+...|+ ...+..++++||
T Consensus 33 ~~h~v~-~~~~~l~~~Gf~~l~e~----~~--l~------~g~----k~~~~r~~~~lia~~~g~---~~~~g~~ii~AH 92 (450)
T 2glf_A 33 ERMTVK-EIKRILDESGFVPLEDF----AG--DP------MNM----TVYAVNRGKAIAAFRVVD---DLKRGLNLVVAH 92 (450)
T ss_dssp HHHHHH-HHHHHHHTTTCEETTSC----CS--CT------TSB----CEEEESSSSCEEEEEBCS---CGGGCCEEEEEE
T ss_pred HHHHHH-HHHHHHHHCcCEEcccc----cC--CC------CCC----EEEEEcCCCEEEEEEeCC---CCCCCeEEEEEe
Confidence 446788 99999999984321111 10 01 111 111112347999988774 112468999999
Q ss_pred ccccc
Q 002402 189 IDTVF 193 (927)
Q Consensus 189 yDSv~ 193 (927)
.|+..
T Consensus 93 ~Dsp~ 97 (450)
T 2glf_A 93 IDSPR 97 (450)
T ss_dssp CCCCE
T ss_pred cccCC
Confidence 99974
No 70
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=23.85 E-value=1.3e+02 Score=24.27 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=15.4
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCch
Q 002402 624 GTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKR 660 (927)
Q Consensus 624 ~~pd~l~d~~ia~~~a~~~~l~~~~l~P~~~~~~~~~ 660 (927)
..|-|+ .++|++.+++...++.+++=-+..|+|++
T Consensus 9 ~vp~wi--Ii~svl~GLllL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 9 AIPIWW--VLVGVLGGLLLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp TCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred CcchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 467663 34433333333333334443444555543
Done!