Query 002405
Match_columns 927
No_of_seqs 551 out of 3687
Neff 9.2
Searched_HMMs 13730
Date Tue Mar 26 01:03:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002405.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002405hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 3.3E-28 2.4E-32 266.4 30.3 227 207-480 96-335 (337)
2 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 4.3E-28 3.1E-32 262.5 29.7 271 224-528 23-310 (311)
3 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 1.5E-27 1.1E-31 265.1 30.2 314 68-482 8-360 (371)
4 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 3.8E-27 2.7E-31 255.0 32.7 251 22-348 20-279 (311)
5 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 2.4E-27 1.8E-31 259.4 30.0 260 20-362 52-318 (337)
6 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 4.7E-27 3.4E-31 261.4 32.3 340 33-481 31-386 (388)
7 d1vyhc1 b.69.4.1 (C:92-408) Pl 99.9 7E-26 5.1E-30 242.2 33.7 276 128-479 13-317 (317)
8 d1tbga_ b.69.4.1 (A:) beta1-su 99.9 1.5E-25 1.1E-29 243.2 34.0 279 66-479 54-340 (340)
9 d1erja_ b.69.4.1 (A:) Tup1, C- 99.9 5.3E-25 3.9E-29 244.6 35.7 290 254-571 59-386 (388)
10 d1nexb2 b.69.4.1 (B:370-744) C 99.9 1.2E-24 8.6E-29 236.9 35.6 332 22-479 13-351 (355)
11 d1vyhc1 b.69.4.1 (C:92-408) Pl 99.9 3.4E-25 2.5E-29 236.8 30.0 270 66-418 16-317 (317)
12 d1nr0a2 b.69.4.1 (A:313-611) A 99.9 3.9E-25 2.8E-29 236.6 29.4 280 66-480 11-297 (299)
13 d1tbga_ b.69.4.1 (A:) beta1-su 99.9 2.6E-24 1.9E-28 233.3 33.5 275 21-379 57-340 (340)
14 d2ovrb2 b.69.4.1 (B:2365-2706) 99.9 4.7E-24 3.4E-28 230.7 33.6 313 21-482 16-340 (342)
15 d1nr0a2 b.69.4.1 (A:313-611) A 99.9 1.6E-24 1.2E-28 231.8 28.9 278 253-570 8-297 (299)
16 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 99.9 3.1E-24 2.3E-28 237.9 25.3 232 223-486 12-279 (371)
17 d1sq9a_ b.69.4.1 (A:) Antivira 99.9 5.3E-23 3.8E-27 229.8 27.8 342 21-418 14-390 (393)
18 d1pgua1 b.69.4.1 (A:2-326) Act 99.9 2.7E-22 2E-26 217.8 31.1 250 23-348 21-292 (325)
19 d1nexb2 b.69.4.1 (B:370-744) C 99.9 2.7E-22 2E-26 217.9 29.4 318 128-527 8-353 (355)
20 d1pgua1 b.69.4.1 (A:2-326) Act 99.9 1.6E-22 1.2E-26 219.6 25.4 272 226-527 25-324 (325)
21 d1k32a3 b.69.9.1 (A:320-679) T 99.9 1.9E-22 1.4E-26 220.7 26.1 302 25-485 8-348 (360)
22 d1sq9a_ b.69.4.1 (A:) Antivira 99.9 9.9E-22 7.2E-26 219.3 30.2 277 66-396 13-334 (393)
23 d1pgua2 b.69.4.1 (A:327-613) A 99.9 1.2E-21 8.6E-26 207.9 19.6 269 66-480 12-286 (287)
24 d2ovrb2 b.69.4.1 (B:2365-2706) 99.9 8.8E-20 6.4E-24 196.6 34.2 295 226-571 23-339 (342)
25 d1yfqa_ b.69.4.2 (A:) Cell cyc 99.9 2.7E-20 2E-24 200.2 27.5 289 22-380 14-321 (342)
26 d1p22a2 b.69.4.1 (A:253-545) F 99.8 2.5E-19 1.9E-23 188.3 29.8 271 131-479 14-293 (293)
27 d1p22a2 b.69.4.1 (A:253-545) F 99.8 4.3E-19 3.1E-23 186.5 29.7 254 74-418 20-293 (293)
28 d1yfqa_ b.69.4.2 (A:) Cell cyc 99.8 7E-19 5.1E-23 189.0 28.0 280 205-514 8-312 (342)
29 d1pgua2 b.69.4.1 (A:327-613) A 99.8 8.3E-19 6.1E-23 185.6 22.5 237 21-362 15-270 (287)
30 d1k32a3 b.69.9.1 (A:320-679) T 99.8 4.6E-19 3.3E-23 193.4 18.1 308 225-571 9-344 (360)
31 d1qksa2 b.70.2.1 (A:136-567) C 99.8 1.4E-17 1E-21 187.6 28.6 354 31-488 32-410 (432)
32 d1hzua2 b.70.2.1 (A:118-543) C 99.7 2.9E-16 2.1E-20 176.5 30.6 341 26-484 25-399 (426)
33 d1hzua2 b.70.2.1 (A:118-543) C 99.7 9.2E-17 6.7E-21 180.6 21.1 311 21-348 63-407 (426)
34 d1l0qa2 b.69.2.3 (A:1-301) Sur 99.6 7.6E-14 5.6E-18 147.1 28.4 225 224-485 37-278 (301)
35 d1l0qa2 b.69.2.3 (A:1-301) Sur 99.6 1.3E-13 9.4E-18 145.3 29.1 264 38-347 10-284 (301)
36 d1qksa2 b.70.2.1 (A:136-567) C 99.6 2.6E-14 1.9E-18 160.4 24.2 299 224-570 67-401 (432)
37 d1jmxb_ b.69.2.2 (B:) Quinohem 99.6 2.5E-14 1.8E-18 154.0 20.3 295 25-390 2-330 (346)
38 d1pbyb_ b.69.2.2 (B:) Quinohem 99.6 3.1E-14 2.3E-18 152.6 21.0 243 231-484 2-312 (337)
39 d2madh_ b.69.2.1 (H:) Methylam 99.5 2.8E-12 2.1E-16 139.9 33.0 212 226-485 132-353 (373)
40 d1pbyb_ b.69.2.2 (B:) Quinohem 99.5 3.3E-13 2.4E-17 144.4 23.2 275 23-347 37-319 (337)
41 d1jmxb_ b.69.2.2 (B:) Quinohem 99.5 6.2E-13 4.5E-17 142.8 21.7 294 225-571 3-321 (346)
42 d2bbkh_ b.69.2.1 (H:) Methylam 99.5 2.4E-12 1.7E-16 139.2 23.6 263 21-348 48-342 (355)
43 d2bbkh_ b.69.2.1 (H:) Methylam 99.4 4E-12 2.9E-16 137.4 23.8 299 24-391 6-341 (355)
44 d1ri6a_ b.69.11.1 (A:) Putativ 99.4 1.1E-11 8E-16 132.3 24.8 271 232-529 6-306 (333)
45 d1ri6a_ b.69.11.1 (A:) Putativ 99.4 9.3E-11 6.8E-15 124.9 30.9 282 33-385 7-312 (333)
46 d2madh_ b.69.2.1 (H:) Methylam 99.4 1.1E-10 8.1E-15 126.9 28.7 261 21-348 67-360 (373)
47 d1mdah_ b.69.2.1 (H:) Methylam 99.2 5.2E-11 3.8E-15 129.8 18.3 258 22-347 67-355 (368)
48 d2bgra1 b.70.3.1 (A:39-508) Di 99.0 5E-08 3.6E-12 109.4 27.8 107 25-158 22-138 (470)
49 d1mdah_ b.69.2.1 (H:) Methylam 98.9 1.2E-08 9.1E-13 110.4 17.9 119 227-348 28-165 (368)
50 d2bgra1 b.70.3.1 (A:39-508) Di 98.8 1.3E-07 9.2E-12 106.0 22.2 107 227-346 25-149 (470)
51 d1jofa_ b.69.10.1 (A:) 3-carbo 98.7 3.6E-05 2.7E-09 82.3 36.3 76 261-340 149-226 (365)
52 d1qnia2 b.69.3.1 (A:10-450) Ni 98.5 2.1E-07 1.5E-11 101.1 13.6 65 263-338 224-289 (441)
53 d1jofa_ b.69.10.1 (A:) 3-carbo 98.3 4.6E-05 3.4E-09 81.4 25.2 264 23-340 43-343 (365)
54 d1qnia2 b.69.3.1 (A:10-450) Ni 98.3 1.9E-06 1.4E-10 93.4 13.2 228 226-481 79-341 (441)
55 d2hqsa1 b.68.4.1 (A:163-431) T 98.3 0.00012 8.5E-09 74.0 25.8 62 257-328 38-103 (269)
56 d2hqsa1 b.68.4.1 (A:163-431) T 98.2 5.3E-05 3.8E-09 76.7 22.7 94 256-360 169-267 (269)
57 d2p4oa1 b.68.6.3 (A:4-305) Hyp 98.1 0.00013 9.3E-09 75.6 23.1 112 224-341 33-146 (302)
58 d2p4oa1 b.68.6.3 (A:4-305) Hyp 98.1 0.00017 1.2E-08 74.6 22.6 66 24-98 32-98 (302)
59 d1pjxa_ b.68.6.1 (A:) Diisopro 97.9 0.0018 1.3E-07 67.0 26.9 67 261-336 230-297 (314)
60 d1rwia_ b.68.9.1 (A:) Serine/t 97.8 0.00031 2.3E-08 70.7 18.9 114 257-385 57-173 (260)
61 d1xfda1 b.70.3.1 (A:127-591) D 97.8 0.009 6.6E-07 65.1 32.5 71 26-100 23-102 (465)
62 d1q7fa_ b.68.9.1 (A:) Brain tu 97.7 0.0044 3.2E-07 62.6 26.2 105 225-338 163-273 (279)
63 d1k32a2 b.68.7.1 (A:39-319) Tr 97.7 0.0041 3E-07 62.2 24.8 112 226-341 6-134 (281)
64 d1q7fa_ b.68.9.1 (A:) Brain tu 97.6 0.0081 5.9E-07 60.5 25.7 79 259-346 159-238 (279)
65 d1rwia_ b.68.9.1 (A:) Serine/t 97.5 0.0018 1.3E-07 64.8 19.1 104 225-337 146-253 (260)
66 d1k32a2 b.68.7.1 (A:39-319) Tr 97.5 0.0038 2.8E-07 62.4 20.8 53 26-86 5-59 (281)
67 d1pjxa_ b.68.6.1 (A:) Diisopro 97.4 0.024 1.7E-06 58.1 26.4 97 261-362 176-279 (314)
68 d2dg1a1 b.68.6.1 (A:6-324) Lac 97.2 0.02 1.4E-06 58.8 23.7 231 224-472 45-294 (319)
69 d1xfda1 b.70.3.1 (A:127-591) D 97.1 0.0043 3.1E-07 67.8 17.8 77 261-345 65-150 (465)
70 d2dg1a1 b.68.6.1 (A:6-324) Lac 97.0 0.061 4.5E-06 54.9 24.7 93 261-362 44-141 (319)
71 d1k3ia3 b.69.1.1 (A:151-537) G 96.8 0.091 6.6E-06 54.8 24.5 109 224-340 25-158 (387)
72 d2ghsa1 b.68.6.1 (A:20-314) Re 95.2 0.69 5E-05 46.0 20.8 128 225-359 109-248 (295)
73 d2ghsa1 b.68.6.1 (A:20-314) Re 90.0 9.2 0.00067 37.1 26.5 105 229-340 29-139 (295)
74 d1qfma1 b.69.7.1 (A:1-430) Pro 89.8 12 0.00091 38.4 25.8 54 25-86 130-189 (430)
75 d1fwxa2 b.69.3.1 (A:8-451) Nit 88.7 5.7 0.00042 40.7 16.8 74 271-345 16-126 (459)
76 d1utca2 b.69.6.1 (A:4-330) Cla 82.3 23 0.0017 34.2 22.9 65 31-97 113-184 (327)
77 d1k3ia3 b.69.1.1 (A:151-537) G 71.7 12 0.00085 37.5 12.3 71 262-340 25-109 (387)
78 d1kb0a2 b.70.1.1 (A:1-573) Qui 68.4 78 0.0057 33.4 19.5 150 269-424 328-510 (573)
79 d1xipa_ b.69.14.1 (A:) Nucleop 62.7 46 0.0034 33.2 14.2 28 20-47 37-64 (381)
80 d1qfma1 b.69.7.1 (A:1-430) Pro 61.6 86 0.0062 31.4 23.9 55 261-326 129-189 (430)
81 d1crua_ b.68.2.1 (A:) Soluble 59.7 23 0.0017 36.6 11.7 22 304-327 142-163 (450)
82 d2ad6a1 b.70.1.1 (A:1-571) Met 57.7 1.2E+02 0.0086 31.8 28.5 70 269-346 116-193 (571)
83 d1v04a_ b.68.6.2 (A:) Serum pa 45.7 1.3E+02 0.0097 28.9 15.1 62 259-324 101-166 (340)
84 d1crua_ b.68.2.1 (A:) Soluble 39.5 38 0.0028 34.8 9.2 62 255-318 25-87 (450)
85 d1fwxa2 b.69.3.1 (A:8-451) Nit 36.2 1.1E+02 0.0078 30.9 11.5 92 227-328 96-213 (459)
86 d1npea_ b.68.5.1 (A:) Nidogen 35.0 1.6E+02 0.012 26.9 25.3 217 70-362 38-262 (263)
87 d1flga_ b.70.1.1 (A:) Ethanol 31.0 44 0.0032 35.6 8.2 31 317-347 495-525 (582)
88 d1kv9a2 b.70.1.1 (A:1-560) Qui 30.9 1.3E+02 0.0092 31.5 12.1 30 318-347 468-497 (560)
89 d1v04a_ b.68.6.2 (A:) Serum pa 30.3 2.3E+02 0.017 27.1 16.5 22 316-337 107-132 (340)
90 d2ad6a1 b.70.1.1 (A:1-571) Met 29.5 56 0.0041 34.6 8.7 30 318-347 474-503 (571)
91 d1xipa_ b.69.14.1 (A:) Nucleop 27.0 2.8E+02 0.02 27.0 15.1 66 261-340 91-156 (381)
92 d1hv2a_ d.42.1.1 (A:) Elongin 24.8 44 0.0032 26.0 5.0 46 826-887 52-97 (99)
93 d1tl2a_ b.67.1.1 (A:) Tachylec 24.8 2.2E+02 0.016 25.0 10.6 55 261-324 138-197 (235)
94 d1tl2a_ b.67.1.1 (A:) Tachylec 24.7 2.2E+02 0.016 25.0 11.6 64 261-336 91-160 (235)
95 d1flga_ b.70.1.1 (A:) Ethanol 24.7 39 0.0028 36.0 6.2 54 265-326 494-548 (582)
96 d2c9wc1 d.42.1.1 (C:17-112) El 23.0 28 0.002 27.1 3.3 43 826-887 52-94 (96)
97 d1klxa_ a.118.18.1 (A:) Cystei 22.1 71 0.0052 25.8 6.3 53 868-920 79-131 (133)
98 d1kb0a2 b.70.1.1 (A:1-573) Qui 21.6 83 0.006 33.1 8.2 30 318-347 487-516 (573)
99 d1jtdb_ b.69.5.2 (B:) beta-lac 21.0 2.8E+02 0.021 25.0 11.9 104 210-337 27-130 (273)
100 d1wp5a_ b.68.10.1 (A:) Topoiso 21.0 3.3E+02 0.024 25.7 20.0 208 77-337 3-224 (323)
101 d2pf1a2 g.32.1.1 (A:36-65) Pro 20.3 25 0.0019 20.1 1.7 16 863-878 15-30 (30)
No 1
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=3.3e-28 Score=266.38 Aligned_cols=227 Identities=19% Similarity=0.221 Sum_probs=189.3
Q ss_pred CCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeecccce-----ecCCCCeE-EEEEcCCCcEEEEEecCCeE
Q 002405 207 ISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDK-----ELGSGDAV-CASIAPEQQILAVGTRRGVV 280 (927)
Q Consensus 207 ~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~-----~~~h~~~v-~v~~sp~~~~la~g~~Dg~V 280 (927)
|...|.+++| +|||+++++++.|+++++|+...... ..+|...+ +++|+|++.++++|+.|+.|
T Consensus 96 h~~~I~~v~~----------s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 165 (337)
T d1gxra_ 96 RDNYIRSCKL----------LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp TTSBEEEEEE----------CTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCcEEEEEE----------cCCCCEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4455777665 78999999999999999998754321 26788888 99999999999999999999
Q ss_pred EEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecC
Q 002405 281 ELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKP 360 (927)
Q Consensus 281 ~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp 360 (927)
++|++.+ ++....... |.++|++++|+|+|..+++|+.|+.+++||+.+++.+..+. + ...|.+++|+|
T Consensus 166 ~~~~~~~-~~~~~~~~~--------~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~-~~~i~~l~~~~ 234 (337)
T d1gxra_ 166 AVWDLHN-QTLVRQFQG--------HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-F-TSQIFSLGYCP 234 (337)
T ss_dssp EEEETTT-TEEEEEECC--------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-C-SSCEEEEEECT
T ss_pred ccccccc-ccccccccc--------cccccccccccccccccccccccccccccccccceeecccc-c-ccceEEEEEcc
Confidence 9999987 666666666 99999999999999999999999999999999988877764 3 67899999999
Q ss_pred CCCCCcccccccc---eeEEEcCCCceEEEEEcCCcceEEEEec---cceeeecccCCCeeeeeeeecCCeEEEeecCCC
Q 002405 361 NQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDT 434 (927)
Q Consensus 361 ~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~v~~~~~---~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~ 434 (927)
++ ..+++|. .+.+|+..+.+... ...|...|..+.+ ++.+++++.|+++++|++..+..
T Consensus 235 ~~----~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~---------- 299 (337)
T d1gxra_ 235 TG----EWLAVGMESSNVEVLHVNKPDKYQ-LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---------- 299 (337)
T ss_dssp TS----SEEEEEETTSCEEEEETTSSCEEE-ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----------
T ss_pred cc----cccceecccccccccccccccccc-ccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCE----------
Confidence 98 7777664 89999998887754 4578888855544 78999999999999999765432
Q ss_pred CcceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEEc
Q 002405 435 DELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDI 480 (927)
Q Consensus 435 ~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd~ 480 (927)
.....|..+|.+++|||||++||+||.||.+ +||+
T Consensus 300 -----------~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 300 -----------IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp -----------EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred -----------EEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 1224578899999999999999999999999 9996
No 2
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.96 E-value=4.3e-28 Score=262.50 Aligned_cols=271 Identities=15% Similarity=0.189 Sum_probs=213.5
Q ss_pred EEEEeCCcEEEEeeecCccceeeecccce---ecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcce--EEEee
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDK---ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLI--RTVSL 297 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~---~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~--~~l~~ 297 (927)
++++|+|+.++.+. +..+.+|+..+... +.+|.+.| |++|+|+|++||+|+.||+|++||+.. +... ..+..
T Consensus 23 ~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~-~~~~~~~~~~~ 100 (311)
T d1nr0a1 23 LGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ-TTHILKTTIPV 100 (311)
T ss_dssp CEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS-TTCCEEEEEEC
T ss_pred EEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeec-ccccccccccc
Confidence 45678898888764 55678888765433 37899999 999999999999999999999999987 4332 44566
Q ss_pred ecCCCCCCCCCCeeEEEECCCCCEEEEEEcC--CcEEEEEccCCeeEEEeccccccceecceecCCCCCCcc-cccccc-
Q 002405 298 YDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS--RGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYE-PLMSGT- 373 (927)
Q Consensus 298 ~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D--g~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~-~l~sg~- 373 (927)
|.++|.+++|+|||++|++++.+ +.++||+...++...++.+| ...|++++|+|++ + .+++|+
T Consensus 101 --------~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h-~~~v~~v~~~~~~----~~~l~sgs~ 167 (311)
T d1nr0a1 101 --------FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ-ARAMNSVDFKPSR----PFRIISGSD 167 (311)
T ss_dssp --------SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC-SSCEEEEEECSSS----SCEEEEEET
T ss_pred --------ccCcccccccccccccccccccccccccccccccccccccccccc-ccccccccccccc----eeeeccccc
Confidence 99999999999999999999864 56999999998888888888 7889999999987 4 366654
Q ss_pred --eeEEEcCCCceEEEEEcCCcceEEEEec---cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCccc
Q 002405 374 --SMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSY 448 (927)
Q Consensus 374 --~~~~W~~~~~~l~~~~~~~~~~v~~~~~---~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 448 (927)
++++|+..++++.....+|...|..+.+ ++.+++++.|+.+++|+...+.. +.... ......
T Consensus 168 d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~-~~~~~------------~~~~~~ 234 (311)
T d1nr0a1 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK-TGVFE------------DDSLKN 234 (311)
T ss_dssp TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EEECB------------CTTSSS
T ss_pred ccccccccccccccccccccccccccccccCccccccccccccccccccccccccc-ccccc------------cccccc
Confidence 8999999999999999999998855555 88999999999999999754332 11111 012345
Q ss_pred ccCCCceEEEEEccCCCEEEEEeCCceE-EEEccCCcEE-eeCCccceeeeEEEEEEeeCCEEEEEEeecCCCeEEEEEe
Q 002405 449 ISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWR-VFGDITQEQKIQSKGLLWLGKIIVVCNYIDSSNTYELLFY 526 (927)
Q Consensus 449 ~~~~~~I~~va~spdG~~la~ag~dg~i-~wd~~s~~w~-~f~~~~~e~~~~v~~~~W~~~~li~~~~~~~~~~~~l~l~ 526 (927)
.+|..+|++++|+|+|++|++||.||.+ +||+++++.. .+... ......+.++.|.++.+++++ .+..|++|
T Consensus 235 ~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~-~~~~~~~~~~~~~~~~l~s~s-----~dG~i~~w 308 (311)
T d1nr0a1 235 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG-TRIEDQQLGIIWTKQALVSIS-----ANGFINFV 308 (311)
T ss_dssp CSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSGGGCEEEEEECSSCEEEEE-----TTCCEEEE
T ss_pred ccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECC-CCccceEEEEEecCCEEEEEE-----CCCEEEEE
Confidence 6899999999999999999999999999 9999988743 23211 111123567899999888873 34678888
Q ss_pred eC
Q 002405 527 PR 528 (927)
Q Consensus 527 ~~ 528 (927)
+.
T Consensus 309 d~ 310 (311)
T d1nr0a1 309 NP 310 (311)
T ss_dssp ET
T ss_pred eC
Confidence 75
No 3
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.96 E-value=1.5e-27 Score=265.08 Aligned_cols=314 Identities=13% Similarity=0.111 Sum_probs=211.2
Q ss_pred ccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEe--eccCCeE
Q 002405 68 GENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNI--VSDNKHM 145 (927)
Q Consensus 68 G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~~~~~l 145 (927)
.++++++|||||+.||+++.+|.|+||++..+.... ...+.++.+.|+++ ++++..|
T Consensus 8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~---------------------~~~l~gH~~~V~~l~fsp~~~~l 66 (371)
T d1k8kc_ 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQ---------------------VHELKEHNGQVTGVDWAPDSNRI 66 (371)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEE---------------------EEEEECCSSCEEEEEEETTTTEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEE---------------------EEEecCCCCCEEEEEECCCCCEE
Confidence 578999999999999999999999999987432110 01123344556554 5678899
Q ss_pred EEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEE
Q 002405 146 LLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFV 225 (927)
Q Consensus 146 ~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 225 (927)
++++.|+.|++|+++....... .....+...|.++.|
T Consensus 67 ~s~s~D~~i~vWd~~~~~~~~~----------------------------------~~~~~~~~~v~~i~~--------- 103 (371)
T d1k8kc_ 67 VTCGTDRNAYVWTLKGRTWKPT----------------------------------LVILRINRAARCVRW--------- 103 (371)
T ss_dssp EEEETTSCEEEEEEETTEEEEE----------------------------------EECCCCSSCEEEEEE---------
T ss_pred EEEECCCeEEEEeecccccccc----------------------------------ccccccccccccccc---------
Confidence 9999999999987653221111 112345566777765
Q ss_pred EEeCCcEEEEeeecCccceeeecccce-------ecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCC--------
Q 002405 226 LYSNGQLMSCSVSKKGLKLAEFIKIDK-------ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESA-------- 289 (927)
Q Consensus 226 ~s~dG~~~~~~~~d~~~~~w~~~~~~~-------~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~-------- 289 (927)
+|||+.+++++.++++++|+...... ..+|...+ +++|+|++++||+|+.||+|++|+.....
T Consensus 104 -~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~ 182 (371)
T d1k8kc_ 104 -APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT 182 (371)
T ss_dssp -CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCB
T ss_pred -ccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccc
Confidence 67888888889999999887654322 15688888 99999999999999999999999986411
Q ss_pred ---------cceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecC
Q 002405 290 ---------SLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKP 360 (927)
Q Consensus 290 ---------~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp 360 (927)
....... +|.+.|.+++|+|||++||+++.|+.|++||+..+..+.++..| ..+|.+++|+|
T Consensus 183 ~~~~~~~~~~~~~~~~--------~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~s~~fs~ 253 (371)
T d1k8kc_ 183 PWGSKMPFGELMFESS--------SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE-TLPLLAVTFIT 253 (371)
T ss_dssp TTBSCCCTTCEEEECC--------CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS-SCCEEEEEEEE
T ss_pred cccccccceeeeeecc--------CccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecc-cccceeeeecC
Confidence 0111222 38999999999999999999999999999999999999999887 77899999999
Q ss_pred CCCCCcccccccc--eeEE--EcCCCceEEEEEcCCcceEEEEecccee---eecccCCCeeeeeeeecCCeEEEeecCC
Q 002405 361 NQDCKYEPLMSGT--SMMQ--WDEYGYRLYAIEEGSSERVLIFSFGKCC---LNRGVSGMTYARQVIYGEDRLLVVQSED 433 (927)
Q Consensus 361 ~~~~~~~~l~sg~--~~~~--W~~~~~~l~~~~~~~~~~v~~~~~~~~~---~s~s~d~~~~~w~~~~~~~~~~~~~~~~ 433 (927)
++ ..+++|. ...+ |+.....+... ++............. .....+....... ..
T Consensus 254 d~----~~la~g~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------- 314 (371)
T d1k8kc_ 254 ES----SLVAAGHDCFPVLFTYDSAAGKLSFG--GRLDVPKQSSQRGLTARERFQNLDKKASSEG----SA--------- 314 (371)
T ss_dssp TT----EEEEEETTSSCEEEEEETTTTEEEEC--CCCCCC--------CHHHHHHHCCCCC-------------------
T ss_pred CC----CEEEEEcCCceEEEEeeCCCceEEEe--eeecCccccccccccceeeEecccceeEEec----cc---------
Confidence 98 7887765 3344 44433333211 110000000000000 0000000000000 00
Q ss_pred CCcceEEEeecCcccccCCCceEEEEEccCC----CEEEEEeCCceE-EEEccC
Q 002405 434 TDELKILHLNLPVSYISQNWPVQHVAASKDG----MFLAVAGLHGLI-LYDIRQ 482 (927)
Q Consensus 434 ~~~~~w~~~~~~~~~~~~~~~I~~va~spdG----~~la~ag~dg~i-~wd~~s 482 (927)
.........|.+.|.++++.|.+ ..+|++|.||.+ +||+++
T Consensus 315 --------~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 315 --------AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp -----------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred --------cccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence 00011223589999999998865 369999999999 999865
No 4
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.96 E-value=3.8e-27 Score=255.02 Aligned_cols=251 Identities=11% Similarity=0.081 Sum_probs=187.4
Q ss_pred ceEEEEEecCeEEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEecCc
Q 002405 22 QQIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEK 101 (927)
Q Consensus 22 ~~iv~fs~dg~lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~ 101 (927)
.-+++++|+|+.||.++++.+.||+++ .......+. .+.+.+.+++|+|||++||+|+.||.|++|++.....
T Consensus 20 ~~~~a~~~~g~~l~~~~~~~v~i~~~~-~~~~~~~~~------~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~ 92 (311)
T d1nr0a1 20 AVVLGNTPAGDKIQYCNGTSVYTVPVG-SLTDTEIYT------EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 92 (311)
T ss_dssp CCCCEECTTSSEEEEEETTEEEEEETT-CSSCCEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred eEEEEEcCCCCEEEEEeCCEEEEEECC-CCceeEEEc------CCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccc
Confidence 345899999999999999999999996 433333221 2457889999999999999999999999999864432
Q ss_pred eeecCCCCCCCccceeeeEEeecccccccccceEEE--eeccCCeEEEEecC--CcEEEEecCCccccceeecccCCCCc
Q 002405 102 SIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSN--IVSDNKHMLLGLSD--GSLYSISWKGEFYGAFELVHSSNDSS 177 (927)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--i~~~~~~l~v~~~d--g~i~~~~w~~~~~~~~~~~~~~~~~~ 177 (927)
.... . +......|.+ +.+++..+++++.+ ..+.++.|+.....
T Consensus 93 ~~~~---------------~------~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~------------ 139 (311)
T d1nr0a1 93 ILKT---------------T------IPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN------------ 139 (311)
T ss_dssp CEEE---------------E------EECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBC------------
T ss_pred cccc---------------c------cccccCcccccccccccccccccccccccccccccccccccc------------
Confidence 1100 0 1122334444 45666777777754 45778777643211
Q ss_pred ccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcE-EEEeeecCccceeeeccccee---
Q 002405 178 VAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQL-MSCSVSKKGLKLAEFIKIDKE--- 253 (927)
Q Consensus 178 ~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~-~~~~~~d~~~~~w~~~~~~~~--- 253 (927)
..+..|...|.++.| +|+|+. +++++.|+.+++||..+.+..
T Consensus 140 ------------------------~~l~~h~~~v~~v~~----------~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~ 185 (311)
T d1nr0a1 140 ------------------------GNLTGQARAMNSVDF----------KPSRPFRIISGSDDNTVAIFEGPPFKFKSTF 185 (311)
T ss_dssp ------------------------BCCCCCSSCEEEEEE----------CSSSSCEEEEEETTSCEEEEETTTBEEEEEE
T ss_pred ------------------------ccccccccccccccc----------cccceeeeccccccccccccccccccccccc
Confidence 112345566777665 677774 777888999999998766543
Q ss_pred cCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEE
Q 002405 254 LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLT 332 (927)
Q Consensus 254 ~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~ 332 (927)
.+|...+ +++++|+++++|+|+.||.|++||..+ +.....+.... ....+|.++|++++|+|||++|++|+.||+|+
T Consensus 186 ~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~-~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~ 263 (311)
T d1nr0a1 186 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDS-LKNVAHSGSVFGLTWSPDGTKIASASADKTIK 263 (311)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTT-SSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccccccccccccCcccccccccccccccccccccc-ccccccccccc-cccccccccccccccCCCCCEEEEEeCCCeEE
Confidence 6889999 999999999999999999999999987 55555544311 12335999999999999999999999999999
Q ss_pred EEEccCCeeEEEeccc
Q 002405 333 VWSVSGCRLMSTIRQI 348 (927)
Q Consensus 333 vW~~~~~~~~~~l~~~ 348 (927)
|||+.+++++.++..+
T Consensus 264 iwd~~t~~~~~~l~~~ 279 (311)
T d1nr0a1 264 IWNVATLKVEKTIPVG 279 (311)
T ss_dssp EEETTTTEEEEEEECC
T ss_pred EEECCCCcEEEEEECC
Confidence 9999999999888765
No 5
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=2.4e-27 Score=259.42 Aligned_cols=260 Identities=12% Similarity=0.108 Sum_probs=193.1
Q ss_pred CCceEEEEEecCeEEEEEccCeEEEeecCCcee--EEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEE
Q 002405 20 SSQQIIYFKVNNGLLLIASPCHIELWSSSQHKV--RLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQ 97 (927)
Q Consensus 20 ~~~~iv~fs~dg~lla~~~~~~v~IW~~~~~~~--~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~ 97 (927)
.....|+|||||++||+++|++|+|||...... .+.... ...+.+.+.+++|+|||+.|++++.||.|++|++.
T Consensus 52 ~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~----~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~ 127 (337)
T d1gxra_ 52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLD----CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp SCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEE----CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred CcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEee----ecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence 346668999999999999999999999853211 111111 12345678999999999999999999999999986
Q ss_pred ecCceeecCCCCCCCccceeeeEEeecccccccccceE--EEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCC
Q 002405 98 ITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSV--SNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSND 175 (927)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~ 175 (927)
........ . +......+ .++.+++..+++++.++.+..++...... .
T Consensus 128 ~~~~~~~~---------------~------~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~--~-------- 176 (337)
T d1gxra_ 128 APTPRIKA---------------E------LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--V-------- 176 (337)
T ss_dssp CC--EEEE---------------E------EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--E--------
T ss_pred cccccccc---------------c------ccccccccccccccccccccccccccccccccccccccc--c--------
Confidence 33221100 0 01111222 34567778889999999998876543221 1
Q ss_pred CcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee--
Q 002405 176 SSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE-- 253 (927)
Q Consensus 176 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~-- 253 (927)
.....+...+.++++ +++|..+++++.|+.+++|+..+++..
T Consensus 177 --------------------------~~~~~~~~~v~~l~~----------s~~~~~~~~~~~d~~v~i~d~~~~~~~~~ 220 (337)
T d1gxra_ 177 --------------------------RQFQGHTDGASCIDI----------SNDGTKLWTGGLDNTVRSWDLREGRQLQQ 220 (337)
T ss_dssp --------------------------EEECCCSSCEEEEEE----------CTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred --------------------------ccccccccccccccc----------cccccccccccccccccccccccceeecc
Confidence 011234556666654 788888999999999999998776544
Q ss_pred cCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEE
Q 002405 254 LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLT 332 (927)
Q Consensus 254 ~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~ 332 (927)
..|.+.+ +++|+|+++++++|+.||.|++||+.. +.. ..... |.++|++++|+|||++|++|+.||.|+
T Consensus 221 ~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~-~~~-~~~~~--------~~~~i~~v~~s~~g~~l~s~s~Dg~i~ 290 (337)
T d1gxra_ 221 HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK-PDK-YQLHL--------HESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-SCE-EEECC--------CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cccccceEEEEEcccccccceeccccccccccccc-ccc-ccccc--------cccccceEEECCCCCEEEEEeCCCeEE
Confidence 4577888 999999999999999999999999986 433 33444 899999999999999999999999999
Q ss_pred EEEccCCeeEEEeccccccceecceecCCC
Q 002405 333 VWSVSGCRLMSTIRQISLSSISSPIVKPNQ 362 (927)
Q Consensus 333 vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~ 362 (927)
+||+..++.+.++. | ...|.+++|+|++
T Consensus 291 iwd~~~~~~~~~~~-~-~~~v~~~~~s~d~ 318 (337)
T d1gxra_ 291 AWRTPYGASIFQSK-E-SSSVLSCDISVDD 318 (337)
T ss_dssp EEETTTCCEEEEEE-C-SSCEEEEEECTTS
T ss_pred EEECCCCCEEEEcc-C-CCCEEEEEEeCCC
Confidence 99999888877765 3 5678888888876
No 6
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=4.7e-27 Score=261.40 Aligned_cols=340 Identities=11% Similarity=0.094 Sum_probs=222.1
Q ss_pred EEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCC
Q 002405 33 LLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSG 112 (927)
Q Consensus 33 lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~ 112 (927)
.+...+++...+|+...+...-..+.+ .+++.+.+.+++|||||++||+|+ ||.|+||++..+........+....
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~ 106 (388)
T d1erja_ 31 ALKKQTNDYYILYNPALPREIDVELHK---SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN 106 (388)
T ss_dssp TSEEECSSCEEEECTTSCCCEEEEEEE---EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----
T ss_pred ccccCCCCcEEEeCCCCCcceeeeeEe---eCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccccc
Confidence 455557788889986423221112222 234668899999999999999986 8899999987554332222221110
Q ss_pred ccceeeeEEeecccccccccceEEE--eeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCC
Q 002405 113 LFFIKISLVLNEQLPFAEKGLSVSN--IVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGL 190 (927)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~v~~--i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 190 (927)
...... ...........|++ +++++..+++|+.||.|++|++.... ..
T Consensus 107 ~~~~~~-----~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~--~~----------------------- 156 (388)
T d1erja_ 107 KDPENL-----NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IV----------------------- 156 (388)
T ss_dssp -----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EE-----------------------
T ss_pred cccccc-----ccccccCCCCCEEEEEECCCCCcceecccccccccccccccc--cc-----------------------
Confidence 000000 00111233344554 45677899999999999987654322 11
Q ss_pred ccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee---cCCCCeEEEEEcC-
Q 002405 191 ASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGSGDAVCASIAP- 266 (927)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h~~~v~v~~sp- 266 (927)
.....+...|.++.+ ++++..+++++.++.+++|+....... ..+...+++.++|
T Consensus 157 -----------~~~~~h~~~v~~~~~----------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 215 (388)
T d1erja_ 157 -----------MILQGHEQDIYSLDY----------FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 215 (388)
T ss_dssp -----------EEECCCSSCEEEEEE----------CTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred -----------ccccccccccccccc----------ccccccccccccceeeeeeeccccccccccccccccccccccCC
Confidence 112345566766654 678888888888999999987765433 4455556666665
Q ss_pred CCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEec
Q 002405 267 EQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR 346 (927)
Q Consensus 267 ~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~ 346 (927)
++++|++|+.||.|++|+..+ +.....+.... ....+|.++|++++|+|||++|++|+.||.+++||+..+.......
T Consensus 216 ~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~-~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 293 (388)
T d1erja_ 216 DGKYIAAGSLDRAVRVWDSET-GFLVERLDSEN-ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 293 (388)
T ss_dssp TCCEEEEEETTSCEEEEETTT-CCEEEEEC-------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCeEEEEcCCCeEEEeeccc-Cccceeecccc-ccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccc
Confidence 789999999999999999987 65555443211 1223489999999999999999999999999999997654322211
Q ss_pred cccccceecceecCCCCCCcccccccceeEEEcCCCceEEEEEcCCcceEEEEec---cceeeecccCCCeeeeeeeecC
Q 002405 347 QISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCCLNRGVSGMTYARQVIYGE 423 (927)
Q Consensus 347 ~~~~~~v~s~~~sp~~~~~~~~l~sg~~~~~W~~~~~~l~~~~~~~~~~v~~~~~---~~~~~s~s~d~~~~~w~~~~~~ 423 (927)
.. ...........|...|..+.+ ++.+++|+.|+++++|++..++
T Consensus 294 ~~--------------------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~ 341 (388)
T d1erja_ 294 TP--------------------------------NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341 (388)
T ss_dssp -------------------------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred cc--------------------------------cccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 10 011222333456666644444 7889999999999999976554
Q ss_pred CeEEEeecCCCCcceEEEeecCcccccCCCceEEEEE------ccCCCEEEEEeCCceE-EEEcc
Q 002405 424 DRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAA------SKDGMFLAVAGLHGLI-LYDIR 481 (927)
Q Consensus 424 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~------spdG~~la~ag~dg~i-~wd~~ 481 (927)
. ...+.+|..+|.++++ +|||++||+||.||.+ +|+++
T Consensus 342 ~--------------------~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 342 P--------------------LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp E--------------------EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred E--------------------EEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 3 4567789999999875 6799999999999999 99974
No 7
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=7e-26 Score=242.15 Aligned_cols=276 Identities=13% Similarity=0.161 Sum_probs=223.0
Q ss_pred cccccceEEEee--ccCCeEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceeccccc
Q 002405 128 FAEKGLSVSNIV--SDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKF 205 (927)
Q Consensus 128 ~~~~~~~v~~i~--~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~ 205 (927)
+.++.+.|++++ ++++.|++|+.||.|++|+++..... ..+.
T Consensus 13 L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~------------------------------------~~~~ 56 (317)
T d1vyhc1 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE------------------------------------RTLK 56 (317)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC------------------------------------EEEC
T ss_pred EcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEE------------------------------------EEEe
Confidence 456667777764 66788999999999999766432111 1123
Q ss_pred CCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee---cCCCCeE-EEEEcCCCcEEEEEecCCeEE
Q 002405 206 PISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGSGDAV-CASIAPEQQILAVGTRRGVVE 281 (927)
Q Consensus 206 ~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h~~~v-~v~~sp~~~~la~g~~Dg~V~ 281 (927)
.|...|.++.+ +++|..++++..+.++..|+....+.. .+|...+ ++.++|+++.+++++.|+.++
T Consensus 57 ~h~~~V~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (317)
T d1vyhc1 57 GHTDSVQDISF----------DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 126 (317)
T ss_dssp CCSSCEEEEEE----------CTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCcEEEEee----------ecccccccccccccccccccccccccccccccccccceeeeccCCCceEEeeccCccee
Confidence 45666777665 678888888888888887776544332 5678888 999999999999999999999
Q ss_pred EEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecCC
Q 002405 282 LYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPN 361 (927)
Q Consensus 282 vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~ 361 (927)
+||+.+ +.....+.. |...+.+++|+|||.+|++|+.|+.+++|+...+.....+.++ ...+.++.++|+
T Consensus 127 ~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 196 (317)
T d1vyhc1 127 MWEVQT-GYCVKTFTG--------HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH-RHVVECISWAPE 196 (317)
T ss_dssp EEETTT-CCEEEEEEC--------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECCS
T ss_pred Eeeccc-ceeeeEEcc--------CCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecC-CCCceEEEEeec
Confidence 999988 778888888 9999999999999999999999999999999999999999887 677888888876
Q ss_pred CCC----------------Ccccccccc---eeEEEcCCCceEEEEEcCCcceEEEEec---cceeeecccCCCeeeeee
Q 002405 362 QDC----------------KYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCCLNRGVSGMTYARQV 419 (927)
Q Consensus 362 ~~~----------------~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~v~~~~~---~~~~~s~s~d~~~~~w~~ 419 (927)
... ....+.+++ .+++|+..+++++....+|...|..+.+ ++.+++++.|+++++|++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 276 (317)
T d1vyhc1 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 276 (317)
T ss_dssp CGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred cccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 521 012233333 7889999999999999999998855544 788999999999999998
Q ss_pred eecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEE
Q 002405 420 IYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYD 479 (927)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd 479 (927)
..++. ...+.+|..+|++++|+|||++||+||.||.+ +||
T Consensus 277 ~~~~~--------------------~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 277 KNKRC--------------------MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp TTSCC--------------------CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCCcE--------------------EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 65543 55677899999999999999999999999999 996
No 8
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95 E-value=1.5e-25 Score=243.16 Aligned_cols=279 Identities=14% Similarity=0.151 Sum_probs=196.0
Q ss_pred hcccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEE--EeeccCC
Q 002405 66 REGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNK 143 (927)
Q Consensus 66 ~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~~~~~ 143 (927)
|.+.+.+++|+||+++||+|+.||.|+|||+..+.....+ ..+...|. ++.+++.
T Consensus 54 H~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~-----------------------~~~~~~v~~v~~~~~~~ 110 (340)
T d1tbga_ 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI-----------------------PLRSSWVMTCAYAPSGN 110 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE-----------------------ECSCSCEEEEEECTTSS
T ss_pred CCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEE-----------------------ecccccEEeeEeeccce
Confidence 5688999999999999999999999999998643321111 11222343 4567788
Q ss_pred eEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceE
Q 002405 144 HMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLL 223 (927)
Q Consensus 144 ~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 223 (927)
.+++++.++.+..+.+.......... ..+..+.......
T Consensus 111 ~l~~~~~d~~i~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~--------- 149 (340)
T d1tbga_ 111 YVACGGLDNICSIYNLKTREGNVRVS--------------------------------RELAGHTGYLSCC--------- 149 (340)
T ss_dssp EEEEEETTCCEEEEESSSSCSCCCEE--------------------------------EEECCCSSCEEEE---------
T ss_pred eeeeecccceeecccccccccccccc--------------------------------eeccccccccccc---------
Confidence 99999999999887665332211100 0011122222221
Q ss_pred EEEEeCCcEEEEeeecCccceeeecccce---ecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeec
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDK---ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYD 299 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~---~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~ 299 (927)
....+..+.....+.....+....... ...+...+ +..+.+.+.++++|+.|++|++||+.+ +..+.++.+
T Consensus 150 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~-~~~~~~~~~-- 224 (340)
T d1tbga_ 150 --RFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTG-- 224 (340)
T ss_dssp --EEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT-TEEEEEECC--
T ss_pred --ccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCC-CcEEEEEeC--
Confidence 123344444455555554444332211 13455666 889999999999999999999999988 778888887
Q ss_pred CCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccc-cccceecceecCCCCCCcccccccceeEEE
Q 002405 300 WGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQI-SLSSISSPIVKPNQDCKYEPLMSGTSMMQW 378 (927)
Q Consensus 300 ~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~-~~~~v~s~~~sp~~~~~~~~l~sg~~~~~W 378 (927)
|.++|++++|+|||++||+|+.||.+++|++........+... +...+.+++|+|+
T Consensus 225 ------h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~----------------- 281 (340)
T d1tbga_ 225 ------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS----------------- 281 (340)
T ss_dssp ------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSS-----------------
T ss_pred ------CCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCC-----------------
Confidence 9999999999999999999999999999999887766554321 1222333333222
Q ss_pred cCCCceEEEEEcCCcceEEEEeccceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEE
Q 002405 379 DEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHV 458 (927)
Q Consensus 379 ~~~~~~l~~~~~~~~~~v~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~v 458 (927)
++.+++|+.|+++++|++..++. ...+.+|..+|+++
T Consensus 282 -----------------------~~~l~~g~~dg~i~iwd~~~~~~--------------------~~~~~~H~~~V~~l 318 (340)
T d1tbga_ 282 -----------------------GRLLLAGYDDFNCNVWDALKADR--------------------AGVLAGHDNRVSCL 318 (340)
T ss_dssp -----------------------SCEEEEEETTSCEEEEETTTCCE--------------------EEEECCCSSCEEEE
T ss_pred -----------------------CCEEEEEECCCEEEEEECCCCcE--------------------EEEEcCCCCCEEEE
Confidence 44567788889999998765443 45667899999999
Q ss_pred EEccCCCEEEEEeCCceE-EEE
Q 002405 459 AASKDGMFLAVAGLHGLI-LYD 479 (927)
Q Consensus 459 a~spdG~~la~ag~dg~i-~wd 479 (927)
+|+|||++||+||.||.+ +||
T Consensus 319 ~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 319 GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEEC
T ss_pred EEeCCCCEEEEEccCCEEEEeC
Confidence 999999999999999999 997
No 9
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=5.3e-25 Score=244.58 Aligned_cols=290 Identities=15% Similarity=0.151 Sum_probs=203.8
Q ss_pred cCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecC----------CCCCCCCCCeeEEEECCCCCEE
Q 002405 254 LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDW----------GYSMDDTGPVSCIAWTPDNSAF 322 (927)
Q Consensus 254 ~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~----------~~~~~h~~~V~~l~~spdg~~L 322 (927)
.+|.++| |++|||+|++||+|+ ||+|+|||+.+ ++.+.++..... .....|...|++++|+|||++|
T Consensus 59 ~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 136 (388)
T d1erja_ 59 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD-GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 136 (388)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTT-CCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecc-cceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcc
Confidence 4799999 999999999999987 89999999987 666665543221 1123588899999999999999
Q ss_pred EEEEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEcCCCceEEEEEcCCcceE-EE
Q 002405 323 AVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERV-LI 398 (927)
Q Consensus 323 asg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~v-~~ 398 (927)
++|+.||.|++|+...++....+.+| ...|.++.+++++ ..+++++ .+++|+..+.........+...+ ..
T Consensus 137 ~s~~~dg~v~i~~~~~~~~~~~~~~h-~~~v~~~~~~~~~----~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 211 (388)
T d1erja_ 137 ATGAEDRLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSG----DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 211 (388)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTS----SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred eecccccccccccccccccccccccc-ccccccccccccc----ccccccccceeeeeeecccccccccccccccccccc
Confidence 99999999999999999999998888 7889999999987 5555554 89999999988777766655544 33
Q ss_pred Eec--cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceE
Q 002405 399 FSF--GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI 476 (927)
Q Consensus 399 ~~~--~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i 476 (927)
+.. ++.+++++.|+.+++|+...+...- ..........+|..+|.+++|+|+|++|++|+.||.+
T Consensus 212 ~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~-------------~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i 278 (388)
T d1erja_ 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVE-------------RLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 278 (388)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEE-------------EEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCCCCCeEEEEcCCCeEEEeecccCccce-------------eeccccccccCCCCCEEEEEECCCCCEEEEEECCCcE
Confidence 333 7789999999999999976443210 0001123345789999999999999999999999999
Q ss_pred -EEEccCCcEEeeCCccc---------eeeeEEEEEEee--CCEEEEEEeecCCCeEEEEEeeCCCCCccceeEEEe-cC
Q 002405 477 -LYDIRQKKWRVFGDITQ---------EQKIQSKGLLWL--GKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKS-LL 543 (927)
Q Consensus 477 -~wd~~s~~w~~f~~~~~---------e~~~~v~~~~W~--~~~li~~~~~~~~~~~~l~l~~~~~l~~~~~~~~~~-~~ 543 (927)
+||+.+++......... .+...+..++|. +.++++++ .+..+++|+... ...+.+.. +.
T Consensus 279 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~-----~dg~i~vwd~~~---~~~~~~l~~H~ 350 (388)
T d1erja_ 279 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-----KDRGVLFWDKKS---GNPLLMLQGHR 350 (388)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE-----TTSEEEEEETTT---CCEEEEEECCS
T ss_pred EEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEe-----CCCEEEEEECCC---CcEEEEEeCCC
Confidence 99998765321110000 011125567775 55677663 335799998742 12222222 23
Q ss_pred CccEEE--------EccCCEEEEEEcCCeEEEEEEE
Q 002405 544 AKPIVM--------DVYEDYILVTYRPFDVHIFHVK 571 (927)
Q Consensus 544 ~~~~~~--------~~~~~~l~v~~~d~~i~l~~~~ 571 (927)
..+..+ ++.++.|++++.|++|++|+++
T Consensus 351 ~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 351 NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 333333 4566789999999999999986
No 10
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=1.2e-24 Score=236.87 Aligned_cols=332 Identities=11% Similarity=0.068 Sum_probs=216.9
Q ss_pred ceE-EEEEecCeEEEEEc-cCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEec
Q 002405 22 QQI-IYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT 99 (927)
Q Consensus 22 ~~i-v~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~ 99 (927)
..| -++++||++||+++ |++|+|||.. .+..+..+. .+.+.+.+++|+|++ .|++++.||.+++|++...
T Consensus 13 ~~vitc~~~~~~~l~tgs~Dg~i~vWd~~-~~~~~~~l~------~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~~ 84 (355)
T d1nexb2 13 TSVITCLQFEDNYVITGADDKMIRVYDSI-NKKFLLQLS------GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG 84 (355)
T ss_dssp SSCEEEEEEETTEEEEEETTTEEEEEETT-TTEEEEEEE------CCSSCEEEEEEETTT-EEEEEETTCCEEEEETTTT
T ss_pred CCcEEEEEECCCEEEEEeCCCeEEEEECC-CCcEEEEEE------CCCCCEEEEEEcCCC-EEEEEeccccccccccccc
Confidence 443 46889999999985 7899999996 555555443 245788999999975 7999999999999997533
Q ss_pred CceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCccc
Q 002405 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVA 179 (927)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i 179 (927)
.......... ...........+++..+++++.||.+++|+........... ... ..
T Consensus 85 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~---~~~--~~ 140 (355)
T d1nexb2 85 CCTHVFEGHN-------------------STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG---EEH--DY 140 (355)
T ss_dssp EEEEEECCCS-------------------SCEEEEEEEEETTEEEEEEEETTSEEEEEECCC----------------CC
T ss_pred cccccccccc-------------------ccccccccccccccceeeeecCCCcEEEEEccCCceecccc---ccc--ee
Confidence 2211111000 00001112334556778899999999987655332111100 000 00
Q ss_pred ccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee---cCC
Q 002405 180 ALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGS 256 (927)
Q Consensus 180 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h 256 (927)
.... .........+.. ............++|+.++++..|+.+++|+..+.+.. .++
T Consensus 141 ~~~~------------------~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~ 200 (355)
T d1nexb2 141 PLVF------------------HTPEENPYFVGV--LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 200 (355)
T ss_dssp CEEE------------------SCTTTCTTEEEE--EECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred ccce------------------eccccccceeee--eeeccccccccccccceeeeecccceeeeeecccccceeeeecc
Confidence 0000 000000111111 11222233456789999999999999999998766543 556
Q ss_pred CCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEE
Q 002405 257 GDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWS 335 (927)
Q Consensus 257 ~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~ 335 (927)
...+ ++.++|+++++++|+.||+|++|++.+ +..+..+.+ |.++|.+++|+| ++|++|+.||.|++||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~-~~~~~~~~~--------h~~~v~~~~~~~--~~l~~~~~dg~i~iwd 269 (355)
T d1nexb2 201 TDRIYSTIYDHERKRCISASMDTTIRIWDLEN-GELMYTLQG--------HTALVGLLRLSD--KFLVSAAADGSIRGWD 269 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTT-CCEEEEECC--------CSSCCCEEEECS--SEEEEECTTSEEEEEE
T ss_pred ccccccccccccceeeecccccceEEeeeccc-ccccccccc--------cccccccccccc--ceeeeeeccccccccc
Confidence 6667 999999999999999999999999988 778888887 999999999974 6999999999999999
Q ss_pred ccCCeeEEEeccccccceecceecCCCCCCcccccccceeEEEcCCCceEEEEEcCCcceEEEEeccceeeecccCCCee
Q 002405 336 VSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTY 415 (927)
Q Consensus 336 ~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~~~~~W~~~~~~l~~~~~~~~~~v~~~~~~~~~~s~s~d~~~~ 415 (927)
+.++... +..| ...+.++ ..++....+++++.|++++
T Consensus 270 ~~~~~~~--~~~~-~~~~~~~----------------------------------------~~~~~~~~~l~~g~d~~i~ 306 (355)
T d1nexb2 270 ANDYSRK--FSYH-HTNLSAI----------------------------------------TTFYVSDNILVSGSENQFN 306 (355)
T ss_dssp TTTCCEE--EEEE-CTTCCCC----------------------------------------CEEEECSSEEEEEETTEEE
T ss_pred cccccee--cccc-cCCceEE----------------------------------------EEEcCCCCEEEEEeCCEEE
Confidence 9776433 2223 1111111 1112212233345588999
Q ss_pred eeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEE
Q 002405 416 ARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYD 479 (927)
Q Consensus 416 ~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd 479 (927)
+|++.+++. +...+.+|..+|.+++|+|+ ..+++++.||.+ +|-
T Consensus 307 vwd~~tg~~-------------------~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~ 351 (355)
T d1nexb2 307 IYNLRSGKL-------------------VHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEI 351 (355)
T ss_dssp EEETTTCCB-------------------CCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEE
T ss_pred EEECCCCCE-------------------EEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEE
Confidence 999876553 12346789999999999987 478889999986 553
No 11
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.94 E-value=3.4e-25 Score=236.78 Aligned_cols=270 Identities=13% Similarity=0.177 Sum_probs=214.4
Q ss_pred hcccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEe--eccCC
Q 002405 66 REGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNI--VSDNK 143 (927)
Q Consensus 66 ~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~~~~ 143 (927)
|.+.+.+++|+||+++||+++.||+|+|||+..+.....+ .++...|.++ .+++.
T Consensus 16 H~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~-----------------------~~h~~~V~~~~~~~~~~ 72 (317)
T d1vyhc1 16 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-----------------------KGHTDSVQDISFDHSGK 72 (317)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-----------------------CCCSSCEEEEEECTTSS
T ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEE-----------------------eCCCCcEEEEeeecccc
Confidence 4578999999999999999999999999998644322211 1222334443 45567
Q ss_pred eEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceE
Q 002405 144 HMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLL 223 (927)
Q Consensus 144 ~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 223 (927)
.++.+..++.+..+...... .. .....+...+.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~--~~----------------------------------~~~~~~~~~~~~~~-------- 108 (317)
T d1vyhc1 73 LLASCSADMTIKLWDFQGFE--CI----------------------------------RTMHGHDHNVSSVS-------- 108 (317)
T ss_dssp EEEEEETTSCCCEEETTSSC--EE----------------------------------ECCCCCSSCEEEEE--------
T ss_pred cccccccccccccccccccc--cc----------------------------------cccccccccceeee--------
Confidence 77777777777654433211 11 11223444455544
Q ss_pred EEEEeCCcEEEEeeecCccceeeeccccee---cCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeec
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYD 299 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~ 299 (927)
+++++..+++++.|+.+++|+..+++.. .+|...+ +++|+|++++||+|+.||+|++|++.+ +.....+..
T Consensus 109 --~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~-~~~~~~~~~-- 183 (317)
T d1vyhc1 109 --IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKAELRE-- 183 (317)
T ss_dssp --ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECC--
T ss_pred --ccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeecc-ceeeEEEec--
Confidence 4788999999999999999998765443 6788888 999999999999999999999999987 777777777
Q ss_pred CCCCCCCCCCeeEEEECCCC--------------------CEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceec
Q 002405 300 WGYSMDDTGPVSCIAWTPDN--------------------SAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVK 359 (927)
Q Consensus 300 ~~~~~~h~~~V~~l~~spdg--------------------~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~s 359 (927)
|.+.+.+++|+|++ ..+++|+.|+.+++|++.+++++.++.+| ...|.+++++
T Consensus 184 ------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~ 256 (317)
T d1vyhc1 184 ------HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-DNWVRGVLFH 256 (317)
T ss_dssp ------CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEC
T ss_pred ------CCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCC-CCCEEEEEEC
Confidence 88999999998864 46999999999999999999999999988 7889999999
Q ss_pred CCCCCCcccccccc---eeEEEcCCCceEEEEEcCCcceEEEEec---cceeeecccCCCeeeee
Q 002405 360 PNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERVLIFSF---GKCCLNRGVSGMTYARQ 418 (927)
Q Consensus 360 p~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~v~~~~~---~~~~~s~s~d~~~~~w~ 418 (927)
|++ ..+++|+ ++++|+..+++++..+.+|.+.|..+.+ ++.+++++.|+++++|+
T Consensus 257 ~~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 257 SGG----KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp SSS----SCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCC----CEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 998 7887775 8999999999999999999999966655 78999999999999996
No 12
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.94 E-value=3.9e-25 Score=236.61 Aligned_cols=280 Identities=13% Similarity=0.128 Sum_probs=183.5
Q ss_pred hcccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEee--ccCC
Q 002405 66 REGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIV--SDNK 143 (927)
Q Consensus 66 ~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~--~~~~ 143 (927)
|.+.+.+++|+|||++||+++.||+|++||++.+...... ...+...|++++ +++
T Consensus 11 H~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~----------------------~~~h~~~v~~v~~~~~g- 67 (299)
T d1nr0a2 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF----------------------PDVHATMITGIKTTSKG- 67 (299)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS----------------------SCSCSSCEEEEEECTTS-
T ss_pred CCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE----------------------cCCCCCcEEEEEeeccc-
Confidence 4577899999999999999999999999998644322111 112233455543 444
Q ss_pred eEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceE
Q 002405 144 HMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLL 223 (927)
Q Consensus 144 ~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 223 (927)
.+++++.|+.+++|........... .....+...+.++
T Consensus 68 ~~~~~~~d~~v~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~--------- 105 (299)
T d1nr0a2 68 DLFTVSWDDHLKVVPAGGSGVDSSK---------------------------------AVANKLSSQPLGL--------- 105 (299)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTS---------------------------------CCEEECSSCEEEE---------
T ss_pred eeecccceeeEEEeccCCccccccc---------------------------------ccccccccccccc---------
Confidence 5777788999987654322111000 0001122334444
Q ss_pred EEEEeCCcEEEEeeecCccceeeecccceecCCCCeEEEEEcCCCcEEEEEecCCeEEEEeccCCCcceE-EEeeecCCC
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIR-TVSLYDWGY 302 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~~~h~~~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~-~l~~~~~~~ 302 (927)
.+++||+.++.+. ++.+.+|+..............+++|+|+++++|+|+.||.|++||+++ +.... ....
T Consensus 106 -~~s~~g~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~-~~~~~~~~~~----- 177 (299)
T d1nr0a2 106 -AVSADGDIAVAAC-YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG-ASVSEVKTIV----- 177 (299)
T ss_dssp -EECTTSSCEEEEE-SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEET-TEEEEEEEEE-----
T ss_pred -ccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccc-----
Confidence 4577888666554 4567888754433322223334899999999999999999999999986 44332 2234
Q ss_pred CCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEe---ccccccceecceecCCCCCCcccccccceeEEEc
Q 002405 303 SMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTI---RQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD 379 (927)
Q Consensus 303 ~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l---~~~~~~~v~s~~~sp~~~~~~~~l~sg~~~~~W~ 379 (927)
|.++|++++|+|+|++|++|+.|+.+++||+.++...... .+| ...|++++|+|+
T Consensus 178 ---~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~s~~------------------ 235 (299)
T d1nr0a2 178 ---HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFH-TAKVACVSWSPD------------------ 235 (299)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCC-SSCEEEEEECTT------------------
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccc------------------
Confidence 8999999999999999999999999999999765433211 112 222333333222
Q ss_pred CCCceEEEEEcCCcceEEEEeccceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEE
Q 002405 380 EYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVA 459 (927)
Q Consensus 380 ~~~~~l~~~~~~~~~~v~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va 459 (927)
++.+++++.|+++++|++........ ......+..+|.++
T Consensus 236 ----------------------~~~l~sgs~dg~i~iwd~~~~~~~~~-----------------~~~~~~~~~~v~~~- 275 (299)
T d1nr0a2 236 ----------------------NVRLATGSLDNSVIVWNMNKPSDHPI-----------------IIKGAHAMSSVNSV- 275 (299)
T ss_dssp ----------------------SSEEEEEETTSCEEEEETTCTTSCCE-----------------EETTSSTTSCEEEE-
T ss_pred ----------------------ccceEEEcCCCEEEEEECCCCCcceE-----------------EEecCCCCCcEEEE-
Confidence 45667888899999999776544210 01112344566665
Q ss_pred EccCCCEEEEEeCCceE-EEEc
Q 002405 460 ASKDGMFLAVAGLHGLI-LYDI 480 (927)
Q Consensus 460 ~spdG~~la~ag~dg~i-~wd~ 480 (927)
++++|++|++||.||.+ +||+
T Consensus 276 ~~~~~~~l~s~s~D~~i~iWdl 297 (299)
T d1nr0a2 276 IWLNETTIVSAGQDSNIKFWNV 297 (299)
T ss_dssp EEEETTEEEEEETTSCEEEEEC
T ss_pred EECCCCEEEEEeCCCEEEEEec
Confidence 45678899999999999 9997
No 13
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=2.6e-24 Score=233.34 Aligned_cols=275 Identities=13% Similarity=0.177 Sum_probs=194.3
Q ss_pred CceEEEEEecCeEEEEEc-cCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEec
Q 002405 21 SQQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT 99 (927)
Q Consensus 21 ~~~iv~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~ 99 (927)
....++|+|||++||+++ |++|+|||.. .+..+..+.. +.+.+.+++|+||++++++++.|+.+++|+....
T Consensus 57 ~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~-~~~~~~~~~~------~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~ 129 (340)
T d1tbga_ 57 KIYAMHWGTDSRLLVSASQDGKLIIWDSY-TTNKVHAIPL------RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETT-TTEEEEEEEC------SCSCEEEEEECTTSSEEEEEETTCCEEEEESSSS
T ss_pred CEEEEEECCCCCEEEEEECCCceeeeecc-cceeEEEEec------ccccEEeeEeeccceeeeeecccceeeccccccc
Confidence 455589999999999995 8899999996 5555544431 3467889999999999999999999999987533
Q ss_pred CceeecCCCCCCCccceeeeEEeecccccccccceEE-EeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCcc
Q 002405 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS-NIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSV 178 (927)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~ 178 (927)
...... .... .+...... .....+..+.....++....+.........
T Consensus 130 ~~~~~~-------------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 178 (340)
T d1tbga_ 130 EGNVRV-------------SREL------AGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT------------ 178 (340)
T ss_dssp CSCCCE-------------EEEE------CCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEE------------
T ss_pred cccccc-------------ceec------ccccccccccccccccccccccccccccccccccccccc------------
Confidence 211000 0000 11111111 112223444555555555443322111000
Q ss_pred cccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee---cC
Q 002405 179 AALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LG 255 (927)
Q Consensus 179 i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~ 255 (927)
........+.. ....+++..++++..|+.+++||..+++.. .+
T Consensus 179 ------------------------~~~~~~~~~~~----------~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~ 224 (340)
T d1tbga_ 179 ------------------------TFTGHTGDVMS----------LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp ------------------------EEECCSSCEEE----------EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECC
T ss_pred ------------------------cccccceeEee----------eccccccceeEEeecCceEEEEECCCCcEEEEEeC
Confidence 00111222333 344678888899999999999998776543 68
Q ss_pred CCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEE
Q 002405 256 SGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVW 334 (927)
Q Consensus 256 h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW 334 (927)
|.+.+ +++|+|++++||+|+.||+|++|++.. ......+... .|..+|++++|+|+|++|++|+.||.|++|
T Consensus 225 h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~-~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~g~~dg~i~iw 297 (340)
T d1tbga_ 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSHD------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCT------TCCSCEEEEEECSSSCEEEEEETTSCEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc-cccccccccc------cccCceEEEEECCCCCEEEEEECCCEEEEE
Confidence 99999 999999999999999999999999987 5555544331 267889999999999999999999999999
Q ss_pred EccCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEc
Q 002405 335 SVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWD 379 (927)
Q Consensus 335 ~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~ 379 (927)
|+.+++++.++.+| .+.|++++|+|++ ..+++|+ ++++|+
T Consensus 298 d~~~~~~~~~~~~H-~~~V~~l~~s~d~----~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 298 DALKADRAGVLAGH-DNRVSCLGVTDDG----MAVATGSWDSFLKIWN 340 (340)
T ss_dssp ETTTCCEEEEECCC-SSCEEEEEECTTS----SCEEEEETTSCEEEEC
T ss_pred ECCCCcEEEEEcCC-CCCEEEEEEeCCC----CEEEEEccCCEEEEeC
Confidence 99999999999998 7889999999987 6666654 566664
No 14
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=4.7e-24 Score=230.74 Aligned_cols=313 Identities=13% Similarity=0.142 Sum_probs=215.3
Q ss_pred CceEE-EEEecCeEEEEEc-cCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEe
Q 002405 21 SQQII-YFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQI 98 (927)
Q Consensus 21 ~~~iv-~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~ 98 (927)
..+|+ ++++||++||+++ |++|+|||.. .+..+..+. .+.+.+.+++|+|+ .|++++.|+.+++|+...
T Consensus 16 ~~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~-~~~~~~~~~------~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~ 86 (342)
T d2ovrb2 16 DDHVITCLQFCGNRIVSGSDDNTLKVWSAV-TGKCLRTLV------GHTGGVWSSQMRDN--IIISGSTDRTLKVWNAET 86 (342)
T ss_dssp TTSCEEEEEEETTEEEEEETTSCEEEEETT-TCCEEEECC------CCSSCEEEEEEETT--EEEEEETTSCEEEEETTT
T ss_pred CCceEEEEEECCCEEEEEeCCCeEEEEECC-CCCEEEEEe------CCCCCEEEEEeCCC--ccccceeccccccccccc
Confidence 35554 5899999999985 7899999995 655554432 24578889999986 899999999999998753
Q ss_pred cCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCcc
Q 002405 99 TEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSV 178 (927)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~ 178 (927)
....... ......+............+..++.+.+++.........
T Consensus 87 ~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~----------- 132 (342)
T d2ovrb2 87 GECIHTL-----------------------YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV----------- 132 (342)
T ss_dssp TEEEEEE-----------------------CCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEE-----------
T ss_pred ccceecc-----------------------cccceeEeeeecccccccccccceeEEEeecccccceee-----------
Confidence 2211110 011112333444566778888888887765432111000
Q ss_pred cccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee---cC
Q 002405 179 AALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LG 255 (927)
Q Consensus 179 i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~ 255 (927)
+.............+..+++++.++.+++|+....... .+
T Consensus 133 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~ 175 (342)
T d2ovrb2 133 -------------------------------------LMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 175 (342)
T ss_dssp -------------------------------------EECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECC
T ss_pred -------------------------------------eecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcC
Confidence 00000111223466777888888999999988765433 56
Q ss_pred CCCeEEEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEE
Q 002405 256 SGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWS 335 (927)
Q Consensus 256 h~~~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~ 335 (927)
|...+ ..+++++..+++|+.||+|++||+.. ++.+..+.. |...|.++++++ ++|++|+.||.|++||
T Consensus 176 ~~~~~-~~~~~~~~~l~s~~~dg~i~~~d~~~-~~~~~~~~~--------~~~~v~~~~~~~--~~l~s~s~d~~i~iwd 243 (342)
T d2ovrb2 176 HTNRV-YSLQFDGIHVVSGSLDTSIRVWDVET-GNCIHTLTG--------HQSLTSGMELKD--NILVSGNADSTVKIWD 243 (342)
T ss_dssp CSSCE-EEEEECSSEEEEEETTSCEEEEETTT-CCEEEEECC--------CCSCEEEEEEET--TEEEEEETTSCEEEEE
T ss_pred ccccc-ccccCCCCEEEEEeCCCeEEEeeccc-ceeeeEecc--------cccceeEEecCC--CEEEEEcCCCEEEEEe
Confidence 65554 44556788999999999999999987 777787777 999999887764 6999999999999999
Q ss_pred ccCCeeEEEeccccccceecceecCCCCCCcccccccceeEEEcCCCceEEEEEcCCcceEEEEec-cceeeecccCCCe
Q 002405 336 VSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSF-GKCCLNRGVSGMT 414 (927)
Q Consensus 336 ~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~~~~~W~~~~~~l~~~~~~~~~~v~~~~~-~~~~~s~s~d~~~ 414 (927)
....+....+..+. .|...+..+++ ++.+++++.|+++
T Consensus 244 ~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~s~s~Dg~i 282 (342)
T d2ovrb2 244 IKTGQCLQTLQGPN-----------------------------------------KHQSAVTCLQFNKNFVITSSDDGTV 282 (342)
T ss_dssp TTTCCEEEEECSTT-----------------------------------------SCSSCEEEEEECSSEEEEEETTSEE
T ss_pred cccccccccccccc-----------------------------------------eeeeceeecccCCCeeEEEcCCCEE
Confidence 98876665554430 12222333344 5567888999999
Q ss_pred eeeeeeecCCeEEEeecCCCCcceEEEeecC-cccccCCCceEEEEEccCCCEEEEEeCCce----E-EEEccC
Q 002405 415 YARQVIYGEDRLLVVQSEDTDELKILHLNLP-VSYISQNWPVQHVAASKDGMFLAVAGLHGL----I-LYDIRQ 482 (927)
Q Consensus 415 ~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~-~~~~~~~~~I~~va~spdG~~la~ag~dg~----i-~wd~~s 482 (927)
++|++..++.- . .++ ....+|..+|++++|+|+|.++|+|+.||+ + +||+..
T Consensus 283 ~iwd~~tg~~i-~---------------~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 283 KLWDLKTGEFI-R---------------NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EEEETTTCCEE-E---------------EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEECCCCCEE-E---------------EEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 99998655431 0 011 122468889999999999999999999995 6 999753
No 15
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.93 E-value=1.6e-24 Score=231.75 Aligned_cols=278 Identities=12% Similarity=0.116 Sum_probs=198.1
Q ss_pred ecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcE
Q 002405 253 ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGL 331 (927)
Q Consensus 253 ~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v 331 (927)
..||.++| +++|+|++++||+|+.||+|++||+++ +...+.+.. .|.++|++++|+|||+++ +++.|+++
T Consensus 8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~-~~~~~~~~~-------~h~~~v~~v~~~~~g~~~-~~~~d~~v 78 (299)
T d1nr0a2 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-GISNRVFPD-------VHATMITGIKTTSKGDLF-TVSWDDHL 78 (299)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEECSSC-------SCSSCEEEEEECTTSCEE-EEETTTEE
T ss_pred cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEcC-------CCCCcEEEEEeeccceee-cccceeeE
Confidence 47999999 999999999999999999999999987 665554432 389999999999999755 55668999
Q ss_pred EEEEccCCeeEE---EeccccccceecceecCCCCCCcccccccc--eeEEEcCCCceEEEEEcCCcceEEEEec-ccee
Q 002405 332 TVWSVSGCRLMS---TIRQISLSSISSPIVKPNQDCKYEPLMSGT--SMMQWDEYGYRLYAIEEGSSERVLIFSF-GKCC 405 (927)
Q Consensus 332 ~vW~~~~~~~~~---~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~--~~~~W~~~~~~l~~~~~~~~~~v~~~~~-~~~~ 405 (927)
++|+..+..... ....+ ...+.+++++|++ ..++++. .+.+|+.. +.......+....+++++ ++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~g----~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l 151 (299)
T d1nr0a2 79 KVVPAGGSGVDSSKAVANKL-SSQPLGLAVSADG----DIAVAACYKHIAIYSHG--KLTEVPISYNSSCVALSNDKQFV 151 (299)
T ss_dssp EEECSSSSSSCTTSCCEEEC-SSCEEEEEECTTS----SCEEEEESSEEEEEETT--EEEEEECSSCEEEEEECTTSCEE
T ss_pred EEeccCCccccccccccccc-ccccccccccccc----ccccccccccccccccc--ccccccccccccccccccccccc
Confidence 999986543211 11122 4567888999987 5555444 78888743 444455556666677777 8889
Q ss_pred eecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEEccCCc
Q 002405 406 LNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKK 484 (927)
Q Consensus 406 ~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd~~s~~ 484 (927)
++++.|+.+++|++..+... ......|..+|++++|+|+|++|++++.||.+ +||+.+++
T Consensus 152 ~~g~~dg~i~~~d~~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~ 212 (299)
T d1nr0a2 152 AVGGQDSKVHVYKLSGASVS-------------------EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF 212 (299)
T ss_dssp EEEETTSEEEEEEEETTEEE-------------------EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT
T ss_pred cccccccccccccccccccc-------------------ccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999997643321 12345688899999999999999999999999 99998876
Q ss_pred EEeeCCccceeeeEEEEEEee--CCEEEEEEeecCCCeEEEEEeeCCCCCccceeEEEecCCccE--EEEccCCEEEEEE
Q 002405 485 WRVFGDITQEQKIQSKGLLWL--GKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPI--VMDVYEDYILVTY 560 (927)
Q Consensus 485 w~~f~~~~~e~~~~v~~~~W~--~~~li~~~~~~~~~~~~l~l~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~l~v~~ 560 (927)
..........+.-.+..++|. ++++++++ .+..+++|+..................++ ...+.++.|++++
T Consensus 213 ~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s 287 (299)
T d1nr0a2 213 ELAHTNSWTFHTAKVACVSWSPDNVRLATGS-----LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287 (299)
T ss_dssp EESCCCCCCCCSSCEEEEEECTTSSEEEEEE-----TTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEE
T ss_pred cccccccccccccccccccccccccceEEEc-----CCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEe
Confidence 543222222222346778886 45666663 23569999875322222222211122222 3456788999999
Q ss_pred cCCeEEEEEE
Q 002405 561 RPFDVHIFHV 570 (927)
Q Consensus 561 ~d~~i~l~~~ 570 (927)
.|++|++|++
T Consensus 288 ~D~~i~iWdl 297 (299)
T d1nr0a2 288 QDSNIKFWNV 297 (299)
T ss_dssp TTSCEEEEEC
T ss_pred CCCEEEEEec
Confidence 9999999986
No 16
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=3.1e-24 Score=237.92 Aligned_cols=232 Identities=15% Similarity=0.104 Sum_probs=180.3
Q ss_pred EEEEEeCCcEEEEeeecCccceeeecccce-----ecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEe
Q 002405 223 LFVLYSNGQLMSCSVSKKGLKLAEFIKIDK-----ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVS 296 (927)
Q Consensus 223 ~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~-----~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~ 296 (927)
+++++|||+.+++++.++.+++|+....+. +.+|.++| +++|+|++++||+|+.|++|+|||+.+ +.....+.
T Consensus 12 ~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~-~~~~~~~~ 90 (371)
T d1k8kc_ 12 CHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG-RTWKPTLV 90 (371)
T ss_dssp EEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET-TEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecc-cccccccc
Confidence 345689999999999999999999865431 26899999 999999999999999999999999986 44333332
Q ss_pred eecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCee----EEEeccccccceecceecCCCCCCccccccc
Q 002405 297 LYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRL----MSTIRQISLSSISSPIVKPNQDCKYEPLMSG 372 (927)
Q Consensus 297 ~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~----~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg 372 (927)
.. +|.++|++++|+|||+.|++|+.|+++++|++..... ......| ...|.+++|+|++ ..+++|
T Consensus 91 ~~------~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~p~~----~~l~s~ 159 (371)
T d1k8kc_ 91 IL------RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI-RSTVLSLDWHPNS----VLLAAG 159 (371)
T ss_dssp CC------CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC-CSCEEEEEECTTS----SEEEEE
T ss_pred cc------cccccccccccccccccceeecccCcceeeeeeccccccccccccccc-ccccccccccccc----cceecc
Confidence 21 2889999999999999999999999999999865432 2233344 6789999999998 788877
Q ss_pred c---eeEEEcCCC------------------ceEEEEEcCCcceEEEE--ec-cceeeecccCCCeeeeeeeecCCeEEE
Q 002405 373 T---SMMQWDEYG------------------YRLYAIEEGSSERVLIF--SF-GKCCLNRGVSGMTYARQVIYGEDRLLV 428 (927)
Q Consensus 373 ~---~~~~W~~~~------------------~~l~~~~~~~~~~v~~~--~~-~~~~~s~s~d~~~~~w~~~~~~~~~~~ 428 (927)
+ ++++|+... ++++....+|...+..+ ++ ++.+++++.|+++++|++..+..
T Consensus 160 s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~---- 235 (371)
T d1k8kc_ 160 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA---- 235 (371)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE----
T ss_pred ccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccc----
Confidence 6 889998653 24566667788888554 44 88999999999999999865443
Q ss_pred eecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceEEEEc--cCCcEE
Q 002405 429 VQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLILYDI--RQKKWR 486 (927)
Q Consensus 429 ~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i~wd~--~s~~w~ 486 (927)
...+..|..+|.+++|+|||++||+|+.+...+|+. ..++|.
T Consensus 236 ----------------~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~~~~~ 279 (371)
T d1k8kc_ 236 ----------------VATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279 (371)
T ss_dssp ----------------EEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEE
T ss_pred ----------------eeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeCCCceEE
Confidence 345667889999999999999998766444335544 444443
No 17
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.91 E-value=5.3e-23 Score=229.78 Aligned_cols=342 Identities=10% Similarity=0.089 Sum_probs=197.6
Q ss_pred CceEEEEEecCeEEEEE-ccCeEEEeecCCce-----eEEEEEeeChHhhhhcccccEEEEcC-CccEEEEEecCcEEEE
Q 002405 21 SQQIIYFKVNNGLLLIA-SPCHIELWSSSQHK-----VRLGKYKRDSESVQREGENLQAVWSP-DTKLIAVVTSSLYLHI 93 (927)
Q Consensus 21 ~~~iv~fs~dg~lla~~-~~~~v~IW~~~~~~-----~~l~~~~r~~~sl~~~G~~~~v~wsp-Dg~~Lav~t~dg~l~i 93 (927)
...|.+++..+++++++ .|++|+||+..... ..............+......+.+++ ++..+++++.||.+++
T Consensus 14 ~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~ 93 (393)
T d1sq9a_ 14 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 93 (393)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEE
T ss_pred cCccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEE
Confidence 56776666777888888 58899999963110 01111000000000000111222222 3456888999999999
Q ss_pred EEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeec-----cCCeEEEEecCCcEEEEecCCcccccee
Q 002405 94 FKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVS-----DNKHMLLGLSDGSLYSISWKGEFYGAFE 168 (927)
Q Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~-----~~~~l~v~~~dg~i~~~~w~~~~~~~~~ 168 (927)
|++..+........+. .... ............++.. ....+++++.||.+.+|+..........
T Consensus 94 w~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~ 162 (393)
T d1sq9a_ 94 YRITREDETKKVIFEK----------LDLL-DSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 162 (393)
T ss_dssp EEEEECTTTCCEEEEE----------ECCS-CTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEccCCCceeeeeccc----------ccee-eeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccce
Confidence 9997654321110000 0000 0000000011112222 2356788889999998765432211110
Q ss_pred ecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeec
Q 002405 169 LVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFI 248 (927)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~ 248 (927)
.. ........ + .........+...+. .++++||| ++++++.|+++++||..
T Consensus 163 ~~---~~~~~~~~--------~-------~~~~~~~~~~~~~~~----------~v~~s~dg-~lasgs~Dg~i~iwd~~ 213 (393)
T d1sq9a_ 163 LT---LNWSPTLE--------L-------QGTVESPMTPSQFAT----------SVDISERG-LIATGFNNGTVQISELS 213 (393)
T ss_dssp TT---TCCCCEEE--------E-------EEEECCSSSSCCCCC----------EEEECTTS-EEEEECTTSEEEEEETT
T ss_pred ee---eeecccee--------c-------ccceecccCCCCcEE----------EEEECCCC-EEEEEeCCCcEEEEeec
Confidence 00 00000000 0 000000111222233 34567888 77899999999999987
Q ss_pred ccce---------ecCCCCeE-EEEEcCCCcEEEEEecCC---eEEEEeccCCCcceEEEeeecC-----CCCCCCCCCe
Q 002405 249 KIDK---------ELGSGDAV-CASIAPEQQILAVGTRRG---VVELYDLAESASLIRTVSLYDW-----GYSMDDTGPV 310 (927)
Q Consensus 249 ~~~~---------~~~h~~~v-~v~~sp~~~~la~g~~Dg---~V~vwd~~~~~~~~~~l~~~~~-----~~~~~h~~~V 310 (927)
+++. ..+|.++| +++|+|++++||+|+.|+ .|++||+++ +..+.++..... ....+|.+.|
T Consensus 214 ~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~-g~~~~~l~~~~~~~~~~~~~~gH~~~V 292 (393)
T d1sq9a_ 214 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWV 292 (393)
T ss_dssp TTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCE
T ss_pred ccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeeccccc-ceeeeeeccccccccceeeeecccCce
Confidence 5433 25799999 999999999999999997 499999988 777776653221 1223699999
Q ss_pred eEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEecccccccee----cceecCCCCCCcccccccceeEE-EcCCCceE
Q 002405 311 SCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSIS----SPIVKPNQDCKYEPLMSGTSMMQ-WDEYGYRL 385 (927)
Q Consensus 311 ~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~----s~~~sp~~~~~~~~l~sg~~~~~-W~~~~~~l 385 (927)
++++|+|||++||||+.|++|+|||+.+++++.++++| ...|. .++|+|++ ..++++....+ |...+.+.
T Consensus 293 ~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH-~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 367 (393)
T d1sq9a_ 293 MSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH-CDDIEIEEDILAVDEHG----DSLAEPGVFDVKFLKKGWRS 367 (393)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-GGGCSSGGGCCCBCTTS----CBCSSCCEEEEEEECTTTSB
T ss_pred eeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCc-CCcccCCccEEEECCCC----CEEEEcccceEEECccCcee
Confidence 99999999999999999999999999999999999998 66665 46788887 66665542211 21111110
Q ss_pred EEEEcCCcceEEEEeccceeeecccCCCeeeee
Q 002405 386 YAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQ 418 (927)
Q Consensus 386 ~~~~~~~~~~v~~~~~~~~~~s~s~d~~~~~w~ 418 (927)
.......+.+++++.|+.++.|.
T Consensus 368 ----------~~~~~~~~~~~~~~~d~~ir~~~ 390 (393)
T d1sq9a_ 368 ----------GMGADLNESLCCVCLDRSIRWFR 390 (393)
T ss_dssp ----------STTCTTSCEEEEEETTTEEEEEE
T ss_pred ----------ccccCCCCEEEEEEcCCeEEEEe
Confidence 00001134567778888888765
No 18
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.90 E-value=2.7e-22 Score=217.82 Aligned_cols=250 Identities=11% Similarity=0.107 Sum_probs=171.8
Q ss_pred eEEEEEecCeEEEEEccCe--EEEeecCCce-eEEEEEeeChHhhhh-cccccEEEEcC--CccEEEEEecCcEEEEEEE
Q 002405 23 QIIYFKVNNGLLLIASPCH--IELWSSSQHK-VRLGKYKRDSESVQR-EGENLQAVWSP--DTKLIAVVTSSLYLHIFKV 96 (927)
Q Consensus 23 ~iv~fs~dg~lla~~~~~~--v~IW~~~~~~-~~l~~~~r~~~sl~~-~G~~~~v~wsp--Dg~~Lav~t~dg~l~i~~l 96 (927)
..++|+|+|+.||.++++. ++.|+..... .....+. .+ ...+++++|+| ||++||+++.||.|+||++
T Consensus 21 t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~------gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~ 94 (325)
T d1pgua1 21 THLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFT------GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGW 94 (325)
T ss_dssp CCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEEC------TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEe------CCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeee
Confidence 3478999999999886555 4556542111 1122221 12 24578999998 6789999999999999999
Q ss_pred EecCceeecCCCCCCCccceeeeEEeecccccccccceEEEe--eccCCeEEEEec--CCcEEEEecCCccccceeeccc
Q 002405 97 QITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNI--VSDNKHMLLGLS--DGSLYSISWKGEFYGAFELVHS 172 (927)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~~~~~l~v~~~--dg~i~~~~w~~~~~~~~~~~~~ 172 (927)
..+...... ...... ......++|.++ .+++..+++++. ++.+.++.|+... ..
T Consensus 95 ~~~~~~~~~-------------~~~~~~--~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~--~~----- 152 (325)
T d1pgua1 95 TFDKESNSV-------------EVNVKS--EFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN--SL----- 152 (325)
T ss_dssp EEEGGGTEE-------------EEEEEE--EEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC--EE-----
T ss_pred cCCcceeee-------------eccccc--ccccccCcEEEEEECCCCCccceeeccccceEEEEeecccc--cc-----
Confidence 755421111 001000 012233445544 566777777654 5577888886322 11
Q ss_pred CCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCc-EEEEeeecCccceeeecccc
Q 002405 173 SNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQ-LMSCSVSKKGLKLAEFIKID 251 (927)
Q Consensus 173 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~-~~~~~~~d~~~~~w~~~~~~ 251 (927)
.....|...|.++.| ++++. .+++++.|+.+++|+....+
T Consensus 153 -----------------------------~~~~~h~~~v~~~~~----------~~~~~~~~~~~~~d~~v~~~d~~~~~ 193 (325)
T d1pgua1 153 -----------------------------GEVSGHSQRINACHL----------KQSRPMRSMTVGDDGSVVFYQGPPFK 193 (325)
T ss_dssp -----------------------------EECCSCSSCEEEEEE----------CSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred -----------------------------eeeeecccccccccc----------cccccceEEEeecccccccccccccc
Confidence 112345667877776 55655 35667778888888865443
Q ss_pred ee------cCCCCeE-EEEEcCC-CcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEEC---CCCC
Q 002405 252 KE------LGSGDAV-CASIAPE-QQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWT---PDNS 320 (927)
Q Consensus 252 ~~------~~h~~~v-~v~~sp~-~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~s---pdg~ 320 (927)
.. .+|...+ +++|+|+ +.++|+|+.||+|++||+.+ ++.+.++.+ |..+|.++.|+ |||+
T Consensus 194 ~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~-~~~~~~l~~--------~~~~v~~~~~s~~~~dg~ 264 (325)
T d1pgua1 194 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS-GEFLKYIED--------DQEPVQGGIFALSWLDSQ 264 (325)
T ss_dssp EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT-CCEEEECCB--------TTBCCCSCEEEEEESSSS
T ss_pred cceecccccCCCCccEEeeeccccceeccccccccceeeeeecc-ccccccccc--------cccccccceeeeeccCCC
Confidence 21 4678888 9999996 68999999999999999987 778888877 77776666665 7899
Q ss_pred EEEEEEcCCcEEEEEccCCeeEEEeccc
Q 002405 321 AFAVGWKSRGLTVWSVSGCRLMSTIRQI 348 (927)
Q Consensus 321 ~Lasg~~Dg~v~vW~~~~~~~~~~l~~~ 348 (927)
+|++|+.|++|+|||+.+++++.++..+
T Consensus 265 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~ 292 (325)
T d1pgua1 265 KFATVGADATIRVWDVTTSKCVQKWTLD 292 (325)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEEeCCCeEEEEECCCCCEEEEEEec
Confidence 9999999999999999999888877654
No 19
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.90 E-value=2.7e-22 Score=217.86 Aligned_cols=318 Identities=11% Similarity=0.085 Sum_probs=221.8
Q ss_pred cccccce-EEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccC
Q 002405 128 FAEKGLS-VSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFP 206 (927)
Q Consensus 128 ~~~~~~~-v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 206 (927)
++++... ++|++++++.|++|+.||.|++|+.... ... ..+.+
T Consensus 8 L~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~--~~~----------------------------------~~l~~ 51 (355)
T d1nexb2 8 LRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINK--KFL----------------------------------LQLSG 51 (355)
T ss_dssp EECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTT--EEE----------------------------------EEEEC
T ss_pred ECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCC--cEE----------------------------------EEEEC
Confidence 3455444 5789999999999999999999765421 111 11345
Q ss_pred CCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee-----cCCCCeE-EEEEcCCCcEEEEEecCCeE
Q 002405 207 ISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE-----LGSGDAV-CASIAPEQQILAVGTRRGVV 280 (927)
Q Consensus 207 ~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~-----~~h~~~v-~v~~sp~~~~la~g~~Dg~V 280 (927)
|...|.+++| +++ ..+++++.|+++++|+....+.. ..+.... ...++++++.+++|+.||+|
T Consensus 52 H~~~V~~l~~----------s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 120 (355)
T d1nexb2 52 HDGGVWALKY----------AHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120 (355)
T ss_dssp CSSCEEEEEE----------ETT-TEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEE
T ss_pred CCCCEEEEEE----------cCC-CEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcE
Confidence 6778888775 454 47888899999999987765432 2233333 67788999999999999999
Q ss_pred EEEeccCCCcceEEEeeecC-------C--------CCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEe
Q 002405 281 ELYDLAESASLIRTVSLYDW-------G--------YSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTI 345 (927)
Q Consensus 281 ~vwd~~~~~~~~~~l~~~~~-------~--------~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l 345 (927)
++|++.+ ............ . ....|...| ..+.++|+.++++..|+.+++||+.+++.....
T Consensus 121 ~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~ 197 (355)
T d1nexb2 121 HVWKLPK-ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV--RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 197 (355)
T ss_dssp EEEECCC------------CCCEEESCTTTCTTEEEEEECCSSCE--EEEEEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEccC-Cceeccccccceeccceeccccccceeeeeeeccccc--cccccccceeeeecccceeeeeecccccceeee
Confidence 9999976 322211111000 0 001244444 346678999999999999999999999888888
Q ss_pred ccccccceecceecCCCCCCcccccccc---eeEEEcCCCceEEEEEcCCcceEEEEec-cceeeecccCCCeeeeeeee
Q 002405 346 RQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERVLIFSF-GKCCLNRGVSGMTYARQVIY 421 (927)
Q Consensus 346 ~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~v~~~~~-~~~~~s~s~d~~~~~w~~~~ 421 (927)
.++ ...+.+..++|++ ..+++++ ++++|+..++.++....+|...|.++.+ ++.+++++.|+++++|++..
T Consensus 198 ~~~-~~~~~~~~~~~~~----~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~ 272 (355)
T d1nexb2 198 SGH-TDRIYSTIYDHER----KRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAND 272 (355)
T ss_dssp CCC-SSCEEEEEEETTT----TEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTT
T ss_pred ecc-ccccccccccccc----eeeecccccceEEeeeccccccccccccccccccccccccceeeeeecccccccccccc
Confidence 776 6678888999987 6666554 8999999999999999999999988888 88999999999999999754
Q ss_pred cCCeEEEeecCCCCcceEEEeecCcccccCCCceEEE-EEccCCCEEEEEeCCceE-EEEccCCcEEeeCCccceeeeEE
Q 002405 422 GEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHV-AASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQS 499 (927)
Q Consensus 422 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~v-a~spdG~~la~ag~dg~i-~wd~~s~~w~~f~~~~~e~~~~v 499 (927)
... .+..|...+.++ +++++++++++|+ ||.+ +||+++++.-......+. -.|
T Consensus 273 ~~~----------------------~~~~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~--~~V 327 (355)
T d1nexb2 273 YSR----------------------KFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDA--DQI 327 (355)
T ss_dssp CCE----------------------EEEEECTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTC--SEE
T ss_pred cce----------------------ecccccCCceEEEEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCC--CCE
Confidence 332 233444455444 5688888877665 7888 999999874211111122 347
Q ss_pred EEEEeeCCEEEEEEeecCCCeEEEEEee
Q 002405 500 KGLLWLGKIIVVCNYIDSSNTYELLFYP 527 (927)
Q Consensus 500 ~~~~W~~~~li~~~~~~~~~~~~l~l~~ 527 (927)
..++|.++.+++++.. ++..-|.+|+
T Consensus 328 ~~v~~~~~~~~~~~s~--dg~~~l~~~d 353 (355)
T d1nexb2 328 WSVNFKGKTLVAAVEK--DGQSFLEILD 353 (355)
T ss_dssp EEEEEETTEEEEEEES--SSCEEEEEEE
T ss_pred EEEEEcCCeEEEEEEC--CCcEEEEEEe
Confidence 7889999988776443 3333455554
No 20
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.90 E-value=1.6e-22 Score=219.57 Aligned_cols=272 Identities=17% Similarity=0.117 Sum_probs=189.0
Q ss_pred EEeCCcEEEEeeecC-ccceeeecccc-----eecCC-CCeE-EEEEcC--CCcEEEEEecCCeEEEEeccCCCcceEEE
Q 002405 226 LYSNGQLMSCSVSKK-GLKLAEFIKID-----KELGS-GDAV-CASIAP--EQQILAVGTRRGVVELYDLAESASLIRTV 295 (927)
Q Consensus 226 ~s~dG~~~~~~~~d~-~~~~w~~~~~~-----~~~~h-~~~v-~v~~sp--~~~~la~g~~Dg~V~vwd~~~~~~~~~~l 295 (927)
++|+|..++.++.+. .++.|+..... ...+| ...+ +++|+| ++++||+|+.||+|+|||+.. +.....+
T Consensus 25 ~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~-~~~~~~~ 103 (325)
T d1pgua1 25 YDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF-DKESNSV 103 (325)
T ss_dssp EETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE-EGGGTEE
T ss_pred ECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecC-Ccceeee
Confidence 467777776655443 24455543221 22566 4567 999998 578999999999999999976 3322222
Q ss_pred eeecCCCCCCCCCCeeEEEECCCCCEEEEEEc--CCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc
Q 002405 296 SLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWK--SRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT 373 (927)
Q Consensus 296 ~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~--Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~ 373 (927)
..........|.++|.+++|+|||+.|++++. ++.+.+|+..+++++.++.+| ...|++++|+|++. ..+++++
T Consensus 104 ~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~---~~~~~~~ 179 (325)
T d1pgua1 104 EVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGH-SQRINACHLKQSRP---MRSMTVG 179 (325)
T ss_dssp EEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSC-SSCEEEEEECSSSS---CEEEEEE
T ss_pred ecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeec-cccccccccccccc---ceEEEee
Confidence 21100001128899999999999999988765 678999999999999999888 78899999999872 2344443
Q ss_pred ---eeEEEcCCCceEEEEEc---CCcceEEE--Eec--cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEee
Q 002405 374 ---SMMQWDEYGYRLYAIEE---GSSERVLI--FSF--GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLN 443 (927)
Q Consensus 374 ---~~~~W~~~~~~l~~~~~---~~~~~v~~--~~~--~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~ 443 (927)
.+++|+....+...... +|...|.. +++ ++.+++++.|+.+++|++..+..
T Consensus 180 ~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~------------------- 240 (325)
T d1pgua1 180 DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF------------------- 240 (325)
T ss_dssp TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE-------------------
T ss_pred cccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccc-------------------
Confidence 78999988877666553 45666754 444 57889999999999999765443
Q ss_pred cCcccccCCCceEEEEEc---cCCCEEEEEeCCceE-EEEccCCcEE-eeCCccceeeeEEEEEEeeCC-EEEEEEeecC
Q 002405 444 LPVSYISQNWPVQHVAAS---KDGMFLAVAGLHGLI-LYDIRQKKWR-VFGDITQEQKIQSKGLLWLGK-IIVVCNYIDS 517 (927)
Q Consensus 444 ~~~~~~~~~~~I~~va~s---pdG~~la~ag~dg~i-~wd~~s~~w~-~f~~~~~e~~~~v~~~~W~~~-~li~~~~~~~ 517 (927)
...+.+|..++..+.|+ |||++|++||.||.+ +||+.+++.. .+....++......++.|.++ .+++++
T Consensus 241 -~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s---- 315 (325)
T d1pgua1 241 -LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS---- 315 (325)
T ss_dssp -EEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE----
T ss_pred -cccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEE----
Confidence 33455677777666555 799999999999999 9999988742 233222222223446777754 666552
Q ss_pred CCeEEEEEee
Q 002405 518 SNTYELLFYP 527 (927)
Q Consensus 518 ~~~~~l~l~~ 527 (927)
.+..|++|+
T Consensus 316 -~dg~i~vwd 324 (325)
T d1pgua1 316 -LDGTLNFYE 324 (325)
T ss_dssp -TTSCEEEEE
T ss_pred -CCCEEEEEE
Confidence 335688885
No 21
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.90 E-value=1.9e-22 Score=220.65 Aligned_cols=302 Identities=12% Similarity=0.045 Sum_probs=203.5
Q ss_pred EEEEe-cCeEEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCc--EEEEEEEEecCc
Q 002405 25 IYFKV-NNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSL--YLHIFKVQITEK 101 (927)
Q Consensus 25 v~fs~-dg~lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg--~l~i~~l~~~~~ 101 (927)
-.||| ||+++|+++.+.|+||+.. .+... + +.+.+.+.+++|||||+.|++++.++ .|++|+++.+.
T Consensus 8 ~~fSP~dG~~~a~~~~g~v~v~d~~-~~~~~----~----~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~- 77 (360)
T d1k32a3 8 EDFSPLDGDLIAFVSRGQAFIQDVS-GTYVL----K----VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK- 77 (360)
T ss_dssp EEEEECGGGCEEEEETTEEEEECTT-SSBEE----E----CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC-
T ss_pred ccccCCCCCEEEEEECCeEEEEECC-CCcEE----E----ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc-
Confidence 56999 9999999999999999996 33221 1 23456788999999999999876553 57777653110
Q ss_pred eeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCccccc
Q 002405 102 SIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAAL 181 (927)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~ 181 (927)
+.. +
T Consensus 78 ----------------------------------------------------~~~--~---------------------- 81 (360)
T d1k32a3 78 ----------------------------------------------------AEK--F---------------------- 81 (360)
T ss_dssp ----------------------------------------------------EEE--C----------------------
T ss_pred ----------------------------------------------------EEE--e----------------------
Confidence 000 0
Q ss_pred ccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee---cCCCC
Q 002405 182 SHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGSGD 258 (927)
Q Consensus 182 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h~~ 258 (927)
..+...+.++. ++|||+.+++++.++.+.+|+....+.. ..|..
T Consensus 82 -----------------------~~~~~~v~~~~----------~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (360)
T d1k32a3 82 -----------------------EENLGNVFAMG----------VDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA 128 (360)
T ss_dssp -----------------------CCCCCSEEEEE----------ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred -----------------------eCCCceEEeee----------ecccccccceeccccccccccccccceeeeeecccc
Confidence 11222344443 5899999999999999999988765543 56777
Q ss_pred eE-EEEEcCCCcEEEEEe----------cCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEc
Q 002405 259 AV-CASIAPEQQILAVGT----------RRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWK 327 (927)
Q Consensus 259 ~v-~v~~sp~~~~la~g~----------~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~ 327 (927)
.+ +++|+|+|++||.++ .++.+++|++.+ ++ ...+.. |...+.+++|+|||+.|++++.
T Consensus 129 ~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~-~~-~~~~~~--------~~~~~~~~~~spdg~~l~~~s~ 198 (360)
T d1k32a3 129 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG-RK-IFAATT--------ENSHDYAPAFDADSKNLYYLSY 198 (360)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT-TE-EEECSC--------SSSBEEEEEECTTSCEEEEEES
T ss_pred cccchhhccceeeeeeeccccccceeeccccceeeecccc-Cc-eeeecc--------cccccccccccCCCCEEEEEeC
Confidence 77 999999999999654 455799999976 43 222333 6788899999999999999999
Q ss_pred CCcEEEEEccCCee-------EEEeccccccceecceecCCCCCCccccccc------c--eeEEEcCCCceEEEEEcCC
Q 002405 328 SRGLTVWSVSGCRL-------MSTIRQISLSSISSPIVKPNQDCKYEPLMSG------T--SMMQWDEYGYRLYAIEEGS 392 (927)
Q Consensus 328 Dg~v~vW~~~~~~~-------~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg------~--~~~~W~~~~~~l~~~~~~~ 392 (927)
|+.+++|+...... ...+..+ ...+..+.+++++ ..+.++ . .+..+...+++.... ..+
T Consensus 199 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 272 (360)
T d1k32a3 199 RSLDPSPDRVVLNFSFEVVSKPFVIPLI-PGSPNPTKLVPRS----MTSEAGEYDLNDMYKRSSPINVDPGDYRMI-IPL 272 (360)
T ss_dssp CCCCCEECSSSSCEECCSCBEEEEEESS-TTCCCGGGCCCGG----GSCCCCCCCCTTGGGGCEECSCCCBCEEEE-EEC
T ss_pred CCceEcccccccceeeccccceEEEecc-cCccccceECCCc----CcccccceeecccccceeecccCcCceeEe-eec
Confidence 99999999754322 2222223 3445566677765 222221 1 233333344433222 222
Q ss_pred cceEEEEec------cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCE
Q 002405 393 SERVLIFSF------GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMF 466 (927)
Q Consensus 393 ~~~v~~~~~------~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~ 466 (927)
.+.+..+.+ ...+++++.++.+++|++..++. ..|.+.|.+++|||||++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------------------------~~~~~~v~~~~~SpDG~~ 328 (360)
T d1k32a3 273 ESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV------------------------TEVKNNLTDLRLSADRKT 328 (360)
T ss_dssp SSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE------------------------EEEEEEEEEEEECTTSCE
T ss_pred CCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE------------------------EEecCCcCEEEECCCCCE
Confidence 333322222 33567888888999998653321 223456899999999999
Q ss_pred EEEEeCCceE-EEEccCCcE
Q 002405 467 LAVAGLHGLI-LYDIRQKKW 485 (927)
Q Consensus 467 la~ag~dg~i-~wd~~s~~w 485 (927)
|++++.||.+ +||+.++..
T Consensus 329 l~~~~~Dg~i~v~d~~~~~~ 348 (360)
T d1k32a3 329 VMVRKDDGKIYTFPLEKPED 348 (360)
T ss_dssp EEEEETTSCEEEEESSCTTS
T ss_pred EEEEECCCeEEEEECCCCCc
Confidence 9999999999 999988753
No 22
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.89 E-value=9.9e-22 Score=219.32 Aligned_cols=277 Identities=10% Similarity=0.078 Sum_probs=177.6
Q ss_pred hcccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeeccccccc-ccceEEEeeccC--
Q 002405 66 REGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAE-KGLSVSNIVSDN-- 142 (927)
Q Consensus 66 ~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~i~~~~-- 142 (927)
|.+.+.++++++ +++++++.|++|+||+........... .... ..... ... ..........++
T Consensus 13 H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~---------~~~~-~~~~~--~~~~~~~~~~~~~~~~~~ 78 (393)
T d1sq9a_ 13 HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKD---------KSYS-HFVHK--SGLHHVDVLQAIERDAFE 78 (393)
T ss_dssp SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGG---------GEEE-EECCT--TCEEEEEEEEEEETTTEE
T ss_pred ccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccc---------eeEe-eeecc--CCceEeeeEeeeccCCCC
Confidence 568888999875 689999999999999976433211000 0000 00000 000 000111222222
Q ss_pred -CeEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcc
Q 002405 143 -KHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMR 221 (927)
Q Consensus 143 -~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 221 (927)
..++.++.||.+.+|+............ ... .......+...+..+.+.+...
T Consensus 79 ~~~~~s~~~dg~v~~w~~~~~~~~~~~~~-----------~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 132 (393)
T d1sq9a_ 79 LCLVATTSFSGDLLFYRITREDETKKVIF-----------EKL---------------DLLDSDMKKHSFWALKWGASND 132 (393)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEE-----------EEE---------------CCSCTTGGGSCEEEEEEECCC-
T ss_pred CcEEEEEeCCCcEEEEEccCCCceeeeec-----------ccc---------------ceeeeccCCCceEEEEEecCCC
Confidence 2355677799998875432211110000 000 0000011223344444433221
Q ss_pred eEEEEEeCCcEEEEeeecCccceeeecccce---------------------ecCCCCeE-EEEEcCCCcEEEEEecCCe
Q 002405 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDK---------------------ELGSGDAV-CASIAPEQQILAVGTRRGV 279 (927)
Q Consensus 222 ~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~---------------------~~~h~~~v-~v~~sp~~~~la~g~~Dg~ 279 (927)
.+.+.++++++.|+++++|+...... ...+...+ |++|+|++ +||+|+.||+
T Consensus 133 -----~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~ 206 (393)
T d1sq9a_ 133 -----RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT 206 (393)
T ss_dssp --------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE
T ss_pred -----cccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCc
Confidence 23456777778888888887642110 02344556 99999998 8999999999
Q ss_pred EEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCc---EEEEEccCCeeEEEec----------
Q 002405 280 VELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRG---LTVWSVSGCRLMSTIR---------- 346 (927)
Q Consensus 280 V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~---v~vW~~~~~~~~~~l~---------- 346 (927)
|+|||+.+ ++.+..+.... ...+|.++|++++|||||++||+|+.|++ |++||+.++.++.++.
T Consensus 207 i~iwd~~~-~~~~~~~~~~~--~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~ 283 (393)
T d1sq9a_ 207 VQISELST-LRPLYNFESQH--SMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASL 283 (393)
T ss_dssp EEEEETTT-TEEEEEEECCC-----CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------
T ss_pred EEEEeecc-ccccccccccc--ccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeecccccccccee
Confidence 99999987 66655544311 11249999999999999999999999975 8999999988888775
Q ss_pred ---cccccceecceecCCCCCCcccccccc---eeEEEcCCCceEEEEEcCCcceE
Q 002405 347 ---QISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSERV 396 (927)
Q Consensus 347 ---~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~v 396 (927)
+| ...|++++|+|++ +.++||+ ++++|+..+++++.++.+|.+.|
T Consensus 284 ~~~gH-~~~V~~l~fspd~----~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v 334 (393)
T d1sq9a_ 284 GEFAH-SSWVMSLSFNDSG----ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 334 (393)
T ss_dssp CCBSB-SSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred eeecc-cCceeeeccCCCC----CeeEEECCCCEEEEEECCCCCEEEEECCcCCcc
Confidence 45 7889999999998 8899887 99999999999999999998876
No 23
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.87 E-value=1.2e-21 Score=207.91 Aligned_cols=269 Identities=10% Similarity=0.037 Sum_probs=179.0
Q ss_pred hcccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeecc-CCe
Q 002405 66 REGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSD-NKH 144 (927)
Q Consensus 66 ~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~-~~~ 144 (927)
|.+++++++|+| |++|+.||+|++|++.... . .+...|.++... +..
T Consensus 12 H~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~-----------------------~h~~~V~~~~~~~~~~ 59 (287)
T d1pgua2 12 HNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----Q-----------------------DHSNLIVSLDNSKAQE 59 (287)
T ss_dssp CSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----C-----------------------CCCSCEEEEECCSTTC
T ss_pred CCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----C-----------------------CCCCCEEEEEecCCCe
Confidence 557889999998 9999999999999865321 1 112234444333 355
Q ss_pred EEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEE
Q 002405 145 MLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLF 224 (927)
Q Consensus 145 l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 224 (927)
++.++.|+.+++ |+.... .. ...+..+.
T Consensus 60 ~~s~s~D~~v~~--w~~~~~-~~----------------------------------------~~~~~~~~--------- 87 (287)
T d1pgua2 60 YSSISWDDTLKV--NGITKH-EF----------------------------------------GSQPKVAS--------- 87 (287)
T ss_dssp CEEEETTTEEEE--TTEEEE-EC----------------------------------------SSCEEEEE---------
T ss_pred EEEEeecccccc--cccccc-cc----------------------------------------ccceeeee---------
Confidence 677788888876 442110 00 11122322
Q ss_pred EEEeCCcEEEEeeecCccceeeecccceecC-CCCeEEEEEcCCCcEEEEEecCC-eEEEEeccCCCcceEEEeeecCCC
Q 002405 225 VLYSNGQLMSCSVSKKGLKLAEFIKIDKELG-SGDAVCASIAPEQQILAVGTRRG-VVELYDLAESASLIRTVSLYDWGY 302 (927)
Q Consensus 225 ~~s~dG~~~~~~~~d~~~~~w~~~~~~~~~~-h~~~v~v~~sp~~~~la~g~~Dg-~V~vwd~~~~~~~~~~l~~~~~~~ 302 (927)
+.++|..++++. +..+.+|+..+.+.... .....+.+++|+++.+++|+.|+ .|++|++.. ......+..
T Consensus 88 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~-~~~~~~~~~----- 159 (287)
T d1pgua2 88 -ANNDGFTAVLTN-DDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSD-LEVSFDLKT----- 159 (287)
T ss_dssp -ECSSSEEEEEET-TSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTE-EEEEEECSS-----
T ss_pred -eccCCceEEEee-cccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccc-cceeeeeee-----
Confidence 345555555433 33455565544433211 11122456788888999988875 799999865 332222221
Q ss_pred CCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEE-eccccccceecceecCCCCCCcccccccceeEEEcCC
Q 002405 303 SMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMST-IRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEY 381 (927)
Q Consensus 303 ~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~-l~~~~~~~v~s~~~sp~~~~~~~~l~sg~~~~~W~~~ 381 (927)
.|.++|++++|+|||.+||+|+.||.|++||+.++..... +.+| ...|.+++|+|.+ ....
T Consensus 160 --~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h-~~~v~~~~~~p~~----~~~~----------- 221 (287)
T d1pgua2 160 --PLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR-TSKINAISWKPAE----KGAN----------- 221 (287)
T ss_dssp --CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC-SSCEEEEEECCCC-------------------
T ss_pred --ccCCceeEEEeccCccccccccccccccceeeccccccccccccc-ccccceeeecccc----cccc-----------
Confidence 2788999999999999999999999999999988876554 3344 6778888887775 1111
Q ss_pred CceEEEEEcCCcceEEEEec-cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEE
Q 002405 382 GYRLYAIEEGSSERVLIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAA 460 (927)
Q Consensus 382 ~~~l~~~~~~~~~~v~~~~~-~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~ 460 (927)
.... +..+++|+.|+++++|++...... ...+.+|..+|++++|
T Consensus 222 ----------------~~~~~~~~l~sgs~D~~i~iw~~~~~~~~-------------------~~~~~~h~~~V~~v~~ 266 (287)
T d1pgua2 222 ----------------EEEIEEDLVATGSLDTNIFIYSVKRPMKI-------------------IKALNAHKDGVNNLLW 266 (287)
T ss_dssp ------------------CCSCCEEEEEETTSCEEEEESSCTTCC-------------------EEETTSSTTCEEEEEE
T ss_pred ----------------cccCCCCeeEeecCCCeEEEEECCCCCeE-------------------EEEeCCCCCCeEEEEE
Confidence 0011 456789999999999998654431 3445689999999999
Q ss_pred ccCCCEEEEEeCCceE-EEEc
Q 002405 461 SKDGMFLAVAGLHGLI-LYDI 480 (927)
Q Consensus 461 spdG~~la~ag~dg~i-~wd~ 480 (927)
+|++ .++++|.||.+ +|++
T Consensus 267 ~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 267 ETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp EETT-EEEEEETTSCEEEEEE
T ss_pred CCCC-EEEEEECCCeEEEEEE
Confidence 9987 58899999999 9986
No 24
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=8.8e-20 Score=196.58 Aligned_cols=295 Identities=12% Similarity=0.174 Sum_probs=209.0
Q ss_pred EEeCCcEEEEeeecCccceeeeccccee---cCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCC
Q 002405 226 LYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWG 301 (927)
Q Consensus 226 ~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~ 301 (927)
+++||+++++++.|+++++||..+++.. .+|...| +++|+|+ +|++|+.|+++++|+... .........
T Consensus 23 ~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~-~~~~~~~~~---- 95 (342)
T d2ovrb2 23 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAET-GECIHTLYG---- 95 (342)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTT-TEEEEEECC----
T ss_pred EEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceeccccccccccc-ccceecccc----
Confidence 3678999999999999999998876643 7899999 9999985 899999999999999876 433333333
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEE
Q 002405 302 YSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQW 378 (927)
Q Consensus 302 ~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W 378 (927)
+...+..... .+..++.+..|+.+.+|+..++.....+... ...... ..+.. ..++.+. .+++|
T Consensus 96 ----~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~----~~~~~~~~d~~i~~~ 162 (342)
T d2ovrb2 96 ----HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGH-VAAVRC--VQYDG----RRVVSGAYDFMVKVW 162 (342)
T ss_dssp ----CSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECC-SSCEEE--EEECS----SCEEEEETTSCEEEE
T ss_pred ----cceeEeeeec--ccccccccccceeEEEeecccccceeeeecc-ccccee--ecccc----ceeeeecCCCeEEEe
Confidence 4555555443 4567888999999999999988777666543 111111 11222 2333332 88999
Q ss_pred cCCCceEEEEEcCCcceEEEEec-cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEE
Q 002405 379 DEYGYRLYAIEEGSSERVLIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQH 457 (927)
Q Consensus 379 ~~~~~~l~~~~~~~~~~v~~~~~-~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~ 457 (927)
+....+.+....+|...+..+.+ ++.+++++.|+++++|++..+.. ...+.+|...+.+
T Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~--------------------~~~~~~~~~~v~~ 222 (342)
T d2ovrb2 163 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC--------------------IHTLTGHQSLTSG 222 (342)
T ss_dssp EGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCE--------------------EEEECCCCSCEEE
T ss_pred ecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeeccccee--------------------eeEecccccceeE
Confidence 99999999999999888888888 88999999999999999765433 3456678888876
Q ss_pred EEEccCCCEEEEEeCCceE-EEEccCCcEEe-eCCccceeeeEEEEEEeeCCEEEEEEeecCCCeEEEEEeeCCCCCccc
Q 002405 458 VAASKDGMFLAVAGLHGLI-LYDIRQKKWRV-FGDITQEQKIQSKGLLWLGKIIVVCNYIDSSNTYELLFYPRYHLDQSS 535 (927)
Q Consensus 458 va~spdG~~la~ag~dg~i-~wd~~s~~w~~-f~~~~~e~~~~v~~~~W~~~~li~~~~~~~~~~~~l~l~~~~~l~~~~ 535 (927)
+++ ++++|++|+.||.+ +||....+... +.. .......+..+.+.++.+++|+ .+..|++|+.. +..
T Consensus 223 ~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~s-----~Dg~i~iwd~~---tg~ 291 (342)
T d2ovrb2 223 MEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQG-PNKHQSAVTCLQFNKNFVITSS-----DDGTVKLWDLK---TGE 291 (342)
T ss_dssp EEE--ETTEEEEEETTSCEEEEETTTCCEEEEECS-TTSCSSCEEEEEECSSEEEEEE-----TTSEEEEEETT---TCC
T ss_pred Eec--CCCEEEEEcCCCEEEEEecccccccccccc-cceeeeceeecccCCCeeEEEc-----CCCEEEEEECC---CCC
Confidence 665 46799999999999 99998776432 322 1222234567788888888773 34679999874 122
Q ss_pred eeEEEec------CCcc--EEEEccCCEEEEEEcCCe----EEEEEEE
Q 002405 536 LLCRKSL------LAKP--IVMDVYEDYILVTYRPFD----VHIFHVK 571 (927)
Q Consensus 536 ~~~~~~~------~~~~--~~~~~~~~~l~v~~~d~~----i~l~~~~ 571 (927)
.+.+... ...+ +.+++.+..+++++.||+ +.+|++.
T Consensus 292 ~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~ 339 (342)
T d2ovrb2 292 FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339 (342)
T ss_dssp EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence 3322211 1112 345666667778887875 7777664
No 25
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.86 E-value=2.7e-20 Score=200.20 Aligned_cols=289 Identities=11% Similarity=0.031 Sum_probs=181.7
Q ss_pred ceEEEEEecCeEEEEEc-cCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCc-cEEEEEecCcEEEEEEEEec
Q 002405 22 QQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDT-KLIAVVTSSLYLHIFKVQIT 99 (927)
Q Consensus 22 ~~iv~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg-~~Lav~t~dg~l~i~~l~~~ 99 (927)
..-|+|||||++||+++ |++|+||+.+ .......+... ..+.+++.+++|+|++ ..|++|+.||.+++|++...
T Consensus 14 I~~l~fsp~~~~L~s~s~Dg~v~iwd~~-~~~~~~~~~~~---~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~ 89 (342)
T d1yfqa_ 14 ISDIKIIPSKSLLLITSWDGSLTVYKFD-IQAKNVDLLQS---LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEE-TTTTEEEEEEE---EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred EEEEEEeCCCCEEEEEECCCeEEEEEcc-CCCcceEEEEe---cCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccc
Confidence 45599999999999985 8999999985 22222222211 2345788999999975 57999999999999998654
Q ss_pred CceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCccc
Q 002405 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVA 179 (927)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i 179 (927)
........+. ...........+...++.++.++.+.+|+............
T Consensus 90 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--------- 140 (342)
T d1yfqa_ 90 PSFQALTNNE--------------------ANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVK--------- 140 (342)
T ss_dssp SSEEECBSCC--------------------CCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEE---------
T ss_pred cccccccccc--------------------cccccccccccccccccccccccccceeeccccccceeeec---------
Confidence 4322211111 00112223345567788888999998854322111111000
Q ss_pred ccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee------
Q 002405 180 ALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE------ 253 (927)
Q Consensus 180 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~------ 253 (927)
. ........ ......+.+++..+++++.|+.+++|+.......
T Consensus 141 -~--------------------~~~~~~~~----------~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~ 189 (342)
T d1yfqa_ 141 -N--------------------LNSNNTKV----------KNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEE 189 (342)
T ss_dssp -E--------------------SCSSSSSS----------CCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEE
T ss_pred -c--------------------cccccccc----------eeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeee
Confidence 0 00000000 0112345678888899999999999987654322
Q ss_pred cCCCCeE-EEEEc-CCCcEEEEEecCCeEEEEeccCCCc-----ceEEEeee-cCCCCCCCCCCeeEEEECCCCCEEEEE
Q 002405 254 LGSGDAV-CASIA-PEQQILAVGTRRGVVELYDLAESAS-----LIRTVSLY-DWGYSMDDTGPVSCIAWTPDNSAFAVG 325 (927)
Q Consensus 254 ~~h~~~v-~v~~s-p~~~~la~g~~Dg~V~vwd~~~~~~-----~~~~l~~~-~~~~~~~h~~~V~~l~~spdg~~Lasg 325 (927)
..+.... +.++. +++..+++++.||.+.+|+.+.... ....+... ......+|...|++++|+|+|++||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg 269 (342)
T d1yfqa_ 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred cccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEE
Confidence 2333334 55554 5788999999999999999875221 11111111 111223578899999999999999999
Q ss_pred EcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEcC
Q 002405 326 WKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDE 380 (927)
Q Consensus 326 ~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~ 380 (927)
+.||.|++||+.+++.+.++..++. +..++++|++ ..++.++ +.+.|..
T Consensus 270 ~~Dg~v~vWD~~~~~~l~~~~~~~~--~~~~~~s~~~----~~l~~a~sdd~~~~~~~ 321 (342)
T d1yfqa_ 270 GSDGIISCWNLQTRKKIKNFAKFNE--DSVVKIACSD----NILCLATSDDTFKTNAA 321 (342)
T ss_dssp ETTSCEEEEETTTTEEEEECCCCSS--SEEEEEEECS----SEEEEEEECTHHHHCSS
T ss_pred CCCCEEEEEECCCCcEEEEecCCCC--CEEEEEEeCC----CEEEEEEcCCcEEEeee
Confidence 9999999999999998888865433 4456677776 5555443 4455543
No 26
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.5e-19 Score=188.26 Aligned_cols=271 Identities=13% Similarity=0.173 Sum_probs=200.8
Q ss_pred ccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCcc
Q 002405 131 KGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSA 210 (927)
Q Consensus 131 ~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 210 (927)
....|+|++++++.|++|+.||.|++|+.+.. ... ..+.+|...
T Consensus 14 ~~~~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~--~~~----------------------------------~~l~~H~~~ 57 (293)
T d1p22a2 14 TSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTL--ECK----------------------------------RILTGHTGS 57 (293)
T ss_dssp SCCCEEEEECCSSEEEEEESSSCEEEEESSSC--CEE----------------------------------EEECCCSSC
T ss_pred CCCCEEEEEEcCCEEEEEeCCCeEEEEECCCC--cEE----------------------------------EEEecCCCC
Confidence 34568899999999999999999999765421 111 112456667
Q ss_pred EEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee--cCCCCeEEEEEcCCCcEEEEEecCCeEEEEeccCC
Q 002405 211 IIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE--LGSGDAVCASIAPEQQILAVGTRRGVVELYDLAES 288 (927)
Q Consensus 211 i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~--~~h~~~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~ 288 (927)
|.++. .|++++++++.|+++++|+....... ..+.......+.+....++++..++.+++|+....
T Consensus 58 V~~v~------------~~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (293)
T d1p22a2 58 VLCLQ------------YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 125 (293)
T ss_dssp EEEEE------------CCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSS
T ss_pred Eeeee------------cccceeecccccccccccccccccccccccccccccccccccccceeecccccceeEeecccc
Confidence 76654 47889999999999999998766443 12222224556677788999999999999999862
Q ss_pred Ccc--eEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCc
Q 002405 289 ASL--IRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKY 366 (927)
Q Consensus 289 ~~~--~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~ 366 (927)
... ...+.. |...|.++.+.+ ..+++++.|+.+++||+.+++++.++.++ ...+..+.+++
T Consensus 126 ~~~~~~~~~~~--------~~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~------ 188 (293)
T d1p22a2 126 TDITLRRVLVG--------HRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGH-KRGIACLQYRD------ 188 (293)
T ss_dssp SCCEEEEEECC--------CSSCEEEEEEET--TEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEET------
T ss_pred ccccccccccc--------cccccccceecc--cccccccCCCceeeecCCCCcEEEEEccc-ccccccccCCC------
Confidence 222 222233 888898888765 57889999999999999999999998877 55666666543
Q ss_pred ccccccc---eeEEEcCCCceEEEEEcCCcceEEEEec-cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEe
Q 002405 367 EPLMSGT---SMMQWDEYGYRLYAIEEGSSERVLIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHL 442 (927)
Q Consensus 367 ~~l~sg~---~~~~W~~~~~~l~~~~~~~~~~v~~~~~-~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~ 442 (927)
..++++. ++++|+..+.+.+....+|...+..+++ .+.+++++.|+.+++|++....... ... ..
T Consensus 189 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~------~~~-----~~ 257 (293)
T d1p22a2 189 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR------APA-----GT 257 (293)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTT------SCT-----TT
T ss_pred CeEEEecCCCEEEEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCCCcccc------ccC-----Cc
Confidence 3455544 8999999999999999888888887777 8889999999999999986543310 000 00
Q ss_pred ecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEE
Q 002405 443 NLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYD 479 (927)
Q Consensus 443 ~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd 479 (927)
.....+.+|.++|.+++| ||++||+||.||.+ +||
T Consensus 258 ~~~~~~~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 258 LCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp TEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred eeeEEecCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence 012346689999999888 57899999999999 997
No 27
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.3e-19 Score=186.48 Aligned_cols=254 Identities=12% Similarity=0.177 Sum_probs=185.2
Q ss_pred EEcCCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCc
Q 002405 74 VWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGS 153 (927)
Q Consensus 74 ~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~ 153 (927)
+++|||++||+|+.||+|+|||+..+..... +.++.+.|+++++++..+++++.||.
T Consensus 20 c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~-----------------------l~~H~~~V~~v~~~~~~l~s~s~D~~ 76 (293)
T d1p22a2 20 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRI-----------------------LTGHTGSVLCLQYDERVIITGSSDST 76 (293)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEE-----------------------ECCCSSCEEEEECCSSEEEEEETTSC
T ss_pred EEEEcCCEEEEEeCCCeEEEEECCCCcEEEE-----------------------EecCCCCEeeeecccceeeccccccc
Confidence 4577999999999999999999864332111 23455678899999999999999999
Q ss_pred EEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEE
Q 002405 154 LYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLM 233 (927)
Q Consensus 154 i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~ 233 (927)
+.+|++......... ....... ....+....+
T Consensus 77 i~~~~~~~~~~~~~~------------------------------------~~~~~~~------------~~~~~~~~~~ 108 (293)
T d1p22a2 77 VRVWDVNTGEMLNTL------------------------------------IHHCEAV------------LHLRFNNGMM 108 (293)
T ss_dssp EEEEESSSCCEEEEE------------------------------------CCCCSCE------------EEEECCTTEE
T ss_pred ccccccccccccccc------------------------------------ccccccc------------ccccccccce
Confidence 998765533211110 0000111 1223455566
Q ss_pred EEeeecCccceeeecccce------ecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCC
Q 002405 234 SCSVSKKGLKLAEFIKIDK------ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDD 306 (927)
Q Consensus 234 ~~~~~d~~~~~w~~~~~~~------~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h 306 (927)
+++..++.+.+|+...... ...|...+ +..+. ...+++++.|++|++||+.+ ++.+..+.+ |
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~-~~~~~~~~~--------~ 177 (293)
T d1p22a2 109 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTST-CEFVRTLNG--------H 177 (293)
T ss_dssp EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTT-CCEEEEEEC--------C
T ss_pred eecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCC-CcEEEEEcc--------c
Confidence 7777777777887654322 15677777 55554 45688999999999999987 777888877 8
Q ss_pred CCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEcCC--
Q 002405 307 TGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEY-- 381 (927)
Q Consensus 307 ~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~-- 381 (927)
...|..+.++ +..+++++.||+|++||+.+...+....++ ...+.. ++++. ..+++|+ ++++|+..
T Consensus 178 ~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~--~~~~~----~~l~sg~~dg~i~iwd~~~~ 248 (293)
T d1p22a2 178 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRC--IRFDN----KRIVSGAYDGKIKVWDLVAA 248 (293)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEE--EECCS----SEEEEEETTSCEEEEEHHHH
T ss_pred ccccccccCC--CCeEEEecCCCEEEEEecccceeeeeeccc-ceeeee--ccccc----eEEEEEcCCCEEEEEECCCC
Confidence 8888887775 568999999999999999998888888776 444543 34444 5666665 89999753
Q ss_pred -------CceEEEEEcCCcceEEEEec-cceeeecccCCCeeeee
Q 002405 382 -------GYRLYAIEEGSSERVLIFSF-GKCCLNRGVSGMTYARQ 418 (927)
Q Consensus 382 -------~~~l~~~~~~~~~~v~~~~~-~~~~~s~s~d~~~~~w~ 418 (927)
+...+..+.+|.+.|..+++ ++.++|+|.|+++++||
T Consensus 249 ~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 249 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred ccccccCCceeeEEecCCCCCEEEEEEcCCEEEEEecCCEEEEeC
Confidence 23567788899999988888 78899999999999997
No 28
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=7e-19 Score=188.97 Aligned_cols=280 Identities=13% Similarity=0.106 Sum_probs=182.3
Q ss_pred cCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeecccce----e--cCCCCeE-EEEEcCC-CcEEEEEec
Q 002405 205 FPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDK----E--LGSGDAV-CASIAPE-QQILAVGTR 276 (927)
Q Consensus 205 ~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~----~--~~h~~~v-~v~~sp~-~~~la~g~~ 276 (927)
..|...|+++.| +|||+++++++.|+++++|+...... . .+|..+| +++|+|+ +.+|++|+.
T Consensus 8 ~~h~d~I~~l~f----------sp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~ 77 (342)
T d1yfqa_ 8 QAPKDYISDIKI----------IPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp SCCSSCEEEEEE----------EGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET
T ss_pred CCCCCCEEEEEE----------eCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccc
Confidence 456777888775 89999999999999999999764322 1 4799999 9999986 568999999
Q ss_pred CCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCee----EEEecccc-cc
Q 002405 277 RGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRL----MSTIRQIS-LS 351 (927)
Q Consensus 277 Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~----~~~l~~~~-~~ 351 (927)
||+|++|++.. ......... .+........+.+++..+++++.|+++++||+..+.. ......+. ..
T Consensus 78 d~~v~~w~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T d1yfqa_ 78 QGEILKVDLIG-SPSFQALTN-------NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp TSCEEEECSSS-SSSEEECBS-------CCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred ccceeeeeccc-ccccccccc-------cccccccccccccccccccccccccccceeeccccccceeeecccccccccc
Confidence 99999999987 444443333 1344456667788899999999999999999854322 22222210 11
Q ss_pred ceecceecCCCCCCcccccccc---eeEEEcCCCceE---EEEEcCCcceE--EEE-ec-cceeeecccCCCeeeeeeee
Q 002405 352 SISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRL---YAIEEGSSERV--LIF-SF-GKCCLNRGVSGMTYARQVIY 421 (927)
Q Consensus 352 ~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l---~~~~~~~~~~v--~~~-~~-~~~~~s~s~d~~~~~w~~~~ 421 (927)
......+.+.+ ..+++++ .+++|+....+. ......+.... ... +. +..+++++.|+.+.+|.+..
T Consensus 150 ~~~~~~~~~~~----~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~ 225 (342)
T d1yfqa_ 150 KNKIFTMDTNS----SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp CCCEEEEEECS----SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred eeeeeeeeccC----CceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecC
Confidence 11122233333 3444443 888998765432 12222222222 222 22 66788899999998887653
Q ss_pred cCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEEccCCcEE-eeCCccceeeeEE
Q 002405 422 GEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWR-VFGDITQEQKIQS 499 (927)
Q Consensus 422 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd~~s~~w~-~f~~~~~e~~~~v 499 (927)
..... ..................+|..+|++++|||+|++||+||.||.+ +||+.+++.- .+.. .+...+
T Consensus 226 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~---~~~~~~ 297 (342)
T d1yfqa_ 226 QGDDY-----NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK---FNEDSV 297 (342)
T ss_dssp TCCST-----TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC---CSSSEE
T ss_pred Cccee-----eccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecC---CCCCEE
Confidence 32210 000000111111223445678899999999999999999999999 9999987642 2322 122346
Q ss_pred EEEEeeCCEEEEEEe
Q 002405 500 KGLLWLGKIIVVCNY 514 (927)
Q Consensus 500 ~~~~W~~~~li~~~~ 514 (927)
..+.+.++.+++++.
T Consensus 298 ~~~s~~~~~l~~a~s 312 (342)
T d1yfqa_ 298 VKIACSDNILCLATS 312 (342)
T ss_dssp EEEEECSSEEEEEEE
T ss_pred EEEEeCCCEEEEEEc
Confidence 788899999888754
No 29
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.80 E-value=8.3e-19 Score=185.58 Aligned_cols=237 Identities=14% Similarity=0.156 Sum_probs=155.6
Q ss_pred CceEEEEEecCeEEEEE-ccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEec
Q 002405 21 SQQIIYFKVNNGLLLIA-SPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT 99 (927)
Q Consensus 21 ~~~iv~fs~dg~lla~~-~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~ 99 (927)
+...++|+| |+++ .|++|++|+.. ... + .+.+.+.++.|++++ .+++++.|+++++|++...
T Consensus 15 ~I~~l~~s~----l~sgs~Dg~v~~Wd~~-~~~------~-----~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~ 77 (287)
T d1pgua2 15 GITALTVNP----LISGSYDGRIMEWSSS-SMH------Q-----DHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKH 77 (287)
T ss_dssp CEEEEETTT----TEEEETTSCEEETTTT-EEE------C-----CCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEE
T ss_pred ceEEEEECc----EEEEeCCCeEEEEECC-CCC------C-----CCCCCEEEEEecCCC-eEEEEeecccccccccccc
Confidence 344467765 5666 58999999996 311 1 234667899999765 5788999999999998632
Q ss_pred CceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCccc
Q 002405 100 EKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVA 179 (927)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i 179 (927)
... ......++..++ .+++...++.+..+ +.......
T Consensus 78 ~~~----------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~------------ 114 (287)
T d1pgua2 78 EFG----------------------------SQPKVASANNDG-FTAVLTNDDDLLIL--QSFTGDII------------ 114 (287)
T ss_dssp ECS----------------------------SCEEEEEECSSS-EEEEEETTSEEEEE--ETTTCCEE------------
T ss_pred ccc----------------------------cceeeeeeccCC-ceEEEeecccceee--eccceeee------------
Confidence 100 000111222233 34444555555543 22221111
Q ss_pred ccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecC-ccceeeeccccee----c
Q 002405 180 ALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKK-GLKLAEFIKIDKE----L 254 (927)
Q Consensus 180 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~-~~~~w~~~~~~~~----~ 254 (927)
..+.+.. ...++++++..++++..++ .+++|+....... .
T Consensus 115 --------------------------------~~~~~~~---~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~ 159 (287)
T d1pgua2 115 --------------------------------KSVRLNS---PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKT 159 (287)
T ss_dssp --------------------------------EEEECSS---CEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSS
T ss_pred --------------------------------eeccccc---eeeeeeccCcceeeeccccceeeeeeccccceeeeeee
Confidence 0111110 1134567888777777664 6888886543321 4
Q ss_pred CCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceE-EEeeecCCCCCCCCCCeeEEEECCC----------CCEE
Q 002405 255 GSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIR-TVSLYDWGYSMDDTGPVSCIAWTPD----------NSAF 322 (927)
Q Consensus 255 ~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~-~l~~~~~~~~~~h~~~V~~l~~spd----------g~~L 322 (927)
.|...+ +++|+|++++||+|+.||.|++||+.+ +.... .+.. |.++|++++|+|+ +.+|
T Consensus 160 ~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~-~~~~~~~~~~--------h~~~v~~~~~~p~~~~~~~~~~~~~~l 230 (287)
T d1pgua2 160 PLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAF--------RTSKINAISWKPAEKGANEEEIEEDLV 230 (287)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCC--------CSSCEEEEEECCCC------CCSCCEE
T ss_pred ccCCceeEEEeccCccccccccccccccceeecc-cccccccccc--------cccccceeeecccccccccccCCCCee
Confidence 567778 999999999999999999999999986 43322 2333 9999999999974 5689
Q ss_pred EEEEcCCcEEEEEccC-CeeEEEeccccccceecceecCCC
Q 002405 323 AVGWKSRGLTVWSVSG-CRLMSTIRQISLSSISSPIVKPNQ 362 (927)
Q Consensus 323 asg~~Dg~v~vW~~~~-~~~~~~l~~~~~~~v~s~~~sp~~ 362 (927)
|+|+.|++|++||+.. .+++..+.+| ...|++++|+|++
T Consensus 231 ~sgs~D~~i~iw~~~~~~~~~~~~~~h-~~~V~~v~~~~~~ 270 (287)
T d1pgua2 231 ATGSLDTNIFIYSVKRPMKIIKALNAH-KDGVNNLLWETPS 270 (287)
T ss_dssp EEEETTSCEEEEESSCTTCCEEETTSS-TTCEEEEEEEETT
T ss_pred EeecCCCeEEEEECCCCCeEEEEeCCC-CCCeEEEEECCCC
Confidence 9999999999999865 5566777777 6778887777764
No 30
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.79 E-value=4.6e-19 Score=193.35 Aligned_cols=308 Identities=9% Similarity=0.040 Sum_probs=198.0
Q ss_pred EEEe-CCcEEEEeeecCccceeeeccccee-cCCCCeE-EEEEcCCCcEEEEEecCC--eEEEEeccCCCcceEEEeeec
Q 002405 225 VLYS-NGQLMSCSVSKKGLKLAEFIKIDKE-LGSGDAV-CASIAPEQQILAVGTRRG--VVELYDLAESASLIRTVSLYD 299 (927)
Q Consensus 225 ~~s~-dG~~~~~~~~d~~~~~w~~~~~~~~-~~h~~~v-~v~~sp~~~~la~g~~Dg--~V~vwd~~~~~~~~~~l~~~~ 299 (927)
-||| ||+.+++++ ++.+.+|+...+... .+|...+ +++|+|||++|++++.+. .|++||+++ + ....+..
T Consensus 9 ~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~-~-~~~~~~~-- 83 (360)
T d1k32a3 9 DFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT-G-KAEKFEE-- 83 (360)
T ss_dssp EEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT-C-CEEECCC--
T ss_pred cccCCCCCEEEEEE-CCeEEEEECCCCcEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC-C-cEEEeeC--
Confidence 3688 899888765 467888987665433 6788889 999999999999877664 799999976 4 3445555
Q ss_pred CCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccc--------
Q 002405 300 WGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMS-------- 371 (927)
Q Consensus 300 ~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~s-------- 371 (927)
|.+.|.+++|||||++|++++.++.+++|++.++.+...+..+ ...+.+++|+|++ +.++.
T Consensus 84 ------~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~spdg----~~la~~~~~~~~~ 152 (360)
T d1k32a3 84 ------NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR-EAMITDFTISDNS----RFIAYGFPLKHGE 152 (360)
T ss_dssp ------CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTS----CEEEEEEEECSST
T ss_pred ------CCceEEeeeecccccccceeccccccccccccccceeeeeecc-cccccchhhccce----eeeeeeccccccc
Confidence 8999999999999999999999999999999999888888776 6788999999998 55432
Q ss_pred --cc---eeEEEcCCCceEEEEEcCC-cceEEEEec-cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeec
Q 002405 372 --GT---SMMQWDEYGYRLYAIEEGS-SERVLIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNL 444 (927)
Q Consensus 372 --g~---~~~~W~~~~~~l~~~~~~~-~~~v~~~~~-~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~ 444 (927)
+. .+.+|+..+++.......+ ......+++ ++.+++++.++.++.|+....... +.. ...
T Consensus 153 ~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~---~~~----------~~~ 219 (360)
T d1k32a3 153 TDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFS---FEV----------VSK 219 (360)
T ss_dssp TCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEE---CCS----------CBE
T ss_pred eeeccccceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEccccccccee---ecc----------ccc
Confidence 22 5778999888766554332 222356666 899999999999998875432110 000 000
Q ss_pred CcccccCCCceEEEEEccCCCEEEEEeCCce-----E-EEEccCCcEEeeCCccceeeeEEEEEEee--CCEEEEEEeec
Q 002405 445 PVSYISQNWPVQHVAASKDGMFLAVAGLHGL-----I-LYDIRQKKWRVFGDITQEQKIQSKGLLWL--GKIIVVCNYID 516 (927)
Q Consensus 445 ~~~~~~~~~~I~~va~spdG~~la~ag~dg~-----i-~wd~~s~~w~~f~~~~~e~~~~v~~~~W~--~~~li~~~~~~ 516 (927)
+.....|...+..+.++|+|+.++++..+.. + .++...++...+.... .. +..+.+. +..... ...
T Consensus 220 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~--~~~ 293 (360)
T d1k32a3 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLE-SS---ILIYSVPVHGEFAAY--YQG 293 (360)
T ss_dssp EEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECS-SE---EEEEECCCCCSHHHH--HHC
T ss_pred eEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecC-CC---ceEEEEEecCCCeeE--EEe
Confidence 1112234444555677888877765543321 1 2222222211110000 00 0001111 000000 011
Q ss_pred CCCeEEEEEeeCCCCCccceeEEEecCCccEEEEccCCEEEEEEcCCeEEEEEEE
Q 002405 517 SSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVK 571 (927)
Q Consensus 517 ~~~~~~l~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~~i~l~~~~ 571 (927)
......+++|+.+.... ..+... -.-+.++++|.+|+++..||.|++|+++
T Consensus 294 ~~~~~~i~~~d~~~~~~--~~~~~~--v~~~~~SpDG~~l~~~~~Dg~i~v~d~~ 344 (360)
T d1k32a3 294 APEKGVLLKYDVKTRKV--TEVKNN--LTDLRLSADRKTVMVRKDDGKIYTFPLE 344 (360)
T ss_dssp CCCCEEEEEEETTTCCE--EEEEEE--EEEEEECTTSCEEEEEETTSCEEEEESS
T ss_pred cCCCCEEEEEECCCCeE--EEecCC--cCEEEECCCCCEEEEEECCCeEEEEECC
Confidence 23456788998752111 111111 1246789999999999999999999875
No 31
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.78 E-value=1.4e-17 Score=187.59 Aligned_cols=354 Identities=8% Similarity=-0.045 Sum_probs=212.3
Q ss_pred CeEEEEE-ccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEecCceeecCCCC
Q 002405 31 NGLLLIA-SPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQ 109 (927)
Q Consensus 31 g~lla~~-~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~ 109 (927)
+-++++. .+++|.|||.. ++..+..+.- ...+..++|||||+++++++.||++++||+..+......
T Consensus 32 ~~~~v~~~d~g~v~v~D~~-t~~v~~~~~~-------g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~---- 99 (432)
T d1qksa2 32 NLFSVTLRDAGQIALIDGS-TYEIKTVLDT-------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA---- 99 (432)
T ss_dssp GEEEEEETTTTEEEEEETT-TCCEEEEEEC-------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE----
T ss_pred cEEEEEEcCCCEEEEEECC-CCcEEEEEeC-------CCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEE----
Confidence 3344555 47799999996 6666655431 123568999999999999999999999998754422110
Q ss_pred CCCccceeeeEEeecccccccccceEE--EeeccCCeEEE-EecCCcEEEEecCCccccceeecccCCCCcccccccccC
Q 002405 110 PSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNKHMLL-GLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFP 186 (927)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~~~~~~l~v-~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~ 186 (927)
.... .....+.+. .+++|++.+++ +..++.+.+|+.+........ . .+....
T Consensus 100 -----------~i~~---~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~-~---~~~~~~------- 154 (432)
T d1qksa2 100 -----------EIKI---GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ-S---TRGMTY------- 154 (432)
T ss_dssp -----------EEEC---CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE-E---CCEECT-------
T ss_pred -----------EEec---CCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeee-c---cCCccc-------
Confidence 0000 001111222 34678888754 566889988654432211110 0 000000
Q ss_pred CCCCccccCCCceecccccCCCccEEEEEEccCc-ceEEEEEeCCcEEEEe-eecCccceeeeccccee----cCCCCeE
Q 002405 187 SNGLASVDTSGAFVSDHKFPISSAIIWLELCLPM-RLLFVLYSNGQLMSCS-VSKKGLKLAEFIKIDKE----LGSGDAV 260 (927)
Q Consensus 187 ~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~~~~~s~dG~~~~~~-~~d~~~~~w~~~~~~~~----~~h~~~v 260 (927)
..+.+.+.. ...+.+++||+.++.+ ..++.+.+|+....+.. ..+....
T Consensus 155 -------------------------~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~ 209 (432)
T d1qksa2 155 -------------------------DEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFL 209 (432)
T ss_dssp -------------------------TTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSE
T ss_pred -------------------------cceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCcc
Confidence 000111221 1234567888765544 44567777775544321 2344555
Q ss_pred -EEEEcCCCcEEEEEecC-CeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEE-cCCcEEEEEcc
Q 002405 261 -CASIAPEQQILAVGTRR-GVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGW-KSRGLTVWSVS 337 (927)
Q Consensus 261 -~v~~sp~~~~la~g~~D-g~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~-~Dg~v~vW~~~ 337 (927)
+++|+|+|+++++++.+ +.+.+++.++ +.....+... ....|.+......+.+.|...++.. .|+++.+|+..
T Consensus 210 ~~~~~spdg~~~~va~~~~~~v~v~d~~~-~~~~~~~~~g---~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~ 285 (432)
T d1qksa2 210 HDGGLDGSHRYFITAANARNKLVVIDTKE-GKLVAIEDTG---GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 285 (432)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECS---SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred ccceECCCCCEEEEeccccceEEEeeccc-ceEEEEeccC---ccccccCcccceecCCCCceecccccCCceEEecccc
Confidence 99999999987777654 5889999876 5555444331 1122555566667776676666554 37889999875
Q ss_pred CCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEcCCCceEEEEEcCCcc--eEEEEeccceeeecccCC
Q 002405 338 GCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEEGSSE--RVLIFSFGKCCLNRGVSG 412 (927)
Q Consensus 338 ~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~~~~~--~v~~~~~~~~~~s~s~d~ 412 (927)
... +..+ ...+....++|++ ..+++++ +..+|..... ..|.. ..+++.-++.+++++.|+
T Consensus 286 ~~~----~~~~-~~~v~~~~~~~~g----~~~~~~s~p~~~~lw~~~~~------~~~~~~~~sv~vpDg~~la~~s~d~ 350 (432)
T d1qksa2 286 PEG----HPDN-AWKILDSFPALGG----GSLFIKTHPNSQYLYVDATL------NPEAEISGSVAVFDIKAMTGDGSDP 350 (432)
T ss_dssp TTT----CTTT-BTSEEEEEECSCS----CCCCEECCTTCSEEEEECTT------CSSHHHHTCEEEEEGGGCCCSSSCC
T ss_pred ccc----cccc-ccEEEEEEEcCCC----CeEEEEecCCccceeecccC------CCCCCeeeEEEEEechhhcccccCC
Confidence 542 1223 3456667777776 4444333 5566754322 12221 123442288999999999
Q ss_pred CeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEEe-----CCceE-EEEccCCcE-
Q 002405 413 MTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAG-----LHGLI-LYDIRQKKW- 485 (927)
Q Consensus 413 ~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag-----~dg~i-~wd~~s~~w- 485 (927)
++++|++..+. .+..|...|.+++|||||++++++. .+|.+ +||..+++-
T Consensus 351 ~~k~w~~~~~~-----------------------~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~ 407 (432)
T d1qksa2 351 EFKTLPIAEWA-----------------------GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELK 407 (432)
T ss_dssp CEEEECHHHHH-----------------------TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred ceEeccccccc-----------------------ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEE
Confidence 99999864332 2335667899999999999997664 46777 999999873
Q ss_pred Eee
Q 002405 486 RVF 488 (927)
Q Consensus 486 ~~f 488 (927)
+.+
T Consensus 408 ~~i 410 (432)
T d1qksa2 408 HVI 410 (432)
T ss_dssp EEE
T ss_pred eEe
Confidence 444
No 32
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.74 E-value=2.9e-16 Score=176.46 Aligned_cols=341 Identities=10% Similarity=-0.008 Sum_probs=192.1
Q ss_pred EEEecCe--EEEEE-ccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEecCce
Q 002405 26 YFKVNNG--LLLIA-SPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKS 102 (927)
Q Consensus 26 ~fs~dg~--lla~~-~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~~~ 102 (927)
.++.|.+ ++++. .+++|+|||.. .+..+..+. .......++|||||++|++++.||++++||+.++...
T Consensus 25 ~~~~d~~~~~~V~~~~dg~v~vwD~~-t~~~~~~l~-------~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~ 96 (426)
T d1hzua2 25 LNDLDLPNLFSVTLRDAGQIALVDGD-SKKIVKVID-------TGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT 96 (426)
T ss_dssp CSCCCGGGEEEEEETTTTEEEEEETT-TCSEEEEEE-------CCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE
T ss_pred cccCCCCeEEEEEEcCCCEEEEEECC-CCcEEEEEe-------CCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCcee
Confidence 3666643 44555 47899999996 665555443 2234568999999999999999999999999765432
Q ss_pred eecCCCCCCCccceeeeEEeecccccccccceEE--EeeccCCeEEEEe-cCCcEEEEecCCccccceeecccCCCCccc
Q 002405 103 IQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVS--NIVSDNKHMLLGL-SDGSLYSISWKGEFYGAFELVHSSNDSSVA 179 (927)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~~~~~~l~v~~-~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i 179 (927)
... .... ..+..+.+. ++++|+++++++. .++.+.++ +.........
T Consensus 97 ~~~---------------~i~~---~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~--d~~~~~~~~~---------- 146 (426)
T d1hzua2 97 KVA---------------EIKI---GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM--DGETLEPKQI---------- 146 (426)
T ss_dssp EEE---------------EEEC---CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEE--ETTTCCEEEE----------
T ss_pred EEE---------------EEeC---CCCCcceEEeeeecCCCCEEEEeecCCCeEEEE--cCCccceeEE----------
Confidence 111 0000 001111222 3457888877765 56677664 4333221100
Q ss_pred ccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeecccceecCCCCe
Q 002405 180 ALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDA 259 (927)
Q Consensus 180 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~~~h~~~ 259 (927)
...+...+.. ..+.++|..
T Consensus 147 ------------------------~~~~~~~~~~----------~~~~~~~~~--------------------------- 165 (426)
T d1hzua2 147 ------------------------VSTRGMTVDT----------QTYHPEPRV--------------------------- 165 (426)
T ss_dssp ------------------------EECCEECSSS----------CCEESCCCE---------------------------
T ss_pred ------------------------eeccCCCccc----------eeecCCCce---------------------------
Confidence 0000000000 001122211
Q ss_pred EEEEEcCCCcEEEEEec-CCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC-CcEEEEEcc
Q 002405 260 VCASIAPEQQILAVGTR-RGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS-RGLTVWSVS 337 (927)
Q Consensus 260 v~v~~sp~~~~la~g~~-Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D-g~v~vW~~~ 337 (927)
..+++++++..+..... .+.+.+++..+.......... +...+..++|+|+|+++.++..+ ..+.+|+..
T Consensus 166 ~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~ 237 (426)
T d1hzua2 166 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG--------AAPFLADGGWDSSHRYFMTAANNSNKVAVIDSK 237 (426)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEE--------CCSSEEEEEECTTSCEEEEEETTCSEEEEEETT
T ss_pred eEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEec--------cCCccEeeeECCCCcEEEeeeecccceeeeecc
Confidence 13555666665554433 356666666552222222333 67788999999999988887754 678999999
Q ss_pred CCeeEEEecccc-ccceecceecCCCCCCcc-ccccc-ceeEEEcC-------CCceEEEEEcCCcceE--EEEec-cce
Q 002405 338 GCRLMSTIRQIS-LSSISSPIVKPNQDCKYE-PLMSG-TSMMQWDE-------YGYRLYAIEEGSSERV--LIFSF-GKC 404 (927)
Q Consensus 338 ~~~~~~~l~~~~-~~~v~s~~~sp~~~~~~~-~l~sg-~~~~~W~~-------~~~~l~~~~~~~~~~v--~~~~~-~~~ 404 (927)
.+.......... ........+.+.+..... ...++ ..+..|+. ...++...+.+|...+ +++++ ++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~ 317 (426)
T d1hzua2 238 DRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH 317 (426)
T ss_dssp TTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSE
T ss_pred cccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCce
Confidence 888776654321 111111222111100000 00000 13334433 3346777788888777 66777 787
Q ss_pred ee-------ecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEEEEccCCCEEEEE-----eC
Q 002405 405 CL-------NRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVA-----GL 472 (927)
Q Consensus 405 ~~-------s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~a-----g~ 472 (927)
++ +++.|+++++|++.+++....+.. . .-+.....|...|.+++|||||++++++ +.
T Consensus 318 l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~----------~-~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~ 386 (426)
T d1hzua2 318 LYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP----------I-AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKND 386 (426)
T ss_dssp EEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC----------H-HHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTS
T ss_pred EEEeecCCCCcccCCEEEEEECCCCCcCeEEec----------c-chhcccCCCCccEEEEEECCCCCEEEEEEecCCCC
Confidence 77 456788999999876654110000 0 0011223456679999999999988654 35
Q ss_pred CceE-EEEccCCc
Q 002405 473 HGLI-LYDIRQKK 484 (927)
Q Consensus 473 dg~i-~wd~~s~~ 484 (927)
+|.+ +||..+++
T Consensus 387 ~~~i~v~D~~T~k 399 (426)
T d1hzua2 387 SSALVVVDDKTLK 399 (426)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCeEEEEECCCCe
Confidence 7888 99999986
No 33
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.71 E-value=9.2e-17 Score=180.58 Aligned_cols=311 Identities=10% Similarity=0.045 Sum_probs=163.1
Q ss_pred CceEEEEEecCeEEEEEc-cCeEEEeecCCceeEEEEE-eeChHhhhhcccccEEEEcCCccEEEEEe-cCcEEEEEEEE
Q 002405 21 SQQIIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKY-KRDSESVQREGENLQAVWSPDTKLIAVVT-SSLYLHIFKVQ 97 (927)
Q Consensus 21 ~~~iv~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~-~r~~~sl~~~G~~~~v~wspDg~~Lav~t-~dg~l~i~~l~ 97 (927)
....++|||||+++++++ |+++++||+. ........ .+.. ..+.+-..+++|||||+++++++ .++.+++||..
T Consensus 63 ~~~~vafSPDGk~l~~~~~d~~v~vwd~~-t~~~~~~~~i~~~--~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~ 139 (426)
T d1hzua2 63 AVHISRMSASGRYLLVIGRDARIDMIDLW-AKEPTKVAEIKIG--IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 139 (426)
T ss_dssp SEEEEEECTTSCEEEEEETTSEEEEEETT-SSSCEEEEEEECC--SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred CeeEEEECCCCCEEEEEeCCCCEEEEEcc-CCceeEEEEEeCC--CCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCC
Confidence 345589999999998885 7899999985 43322211 1111 12334456788999999976654 78999999976
Q ss_pred ecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecC-CcEEEEecCCccccceeecccCCCC
Q 002405 98 ITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSD-GSLYSISWKGEFYGAFELVHSSNDS 176 (927)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~d-g~i~~~~w~~~~~~~~~~~~~~~~~ 176 (927)
..........+... .....+.. .........+.++..++++..+ +.+..+.-......... ..+ ..
T Consensus 140 ~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~-~~ 206 (426)
T d1hzua2 140 TLEPKQIVSTRGMT---VDTQTYHP-------EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT--SIG-AA 206 (426)
T ss_dssp TCCEEEEEECCEEC---SSSCCEES-------CCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEE--EEE-CC
T ss_pred ccceeEEeeccCCC---ccceeecC-------CCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeE--Eec-cC
Confidence 54432222111100 00000000 0011112333444555544432 33332221111100000 000 11
Q ss_pred cccccccccCCCCCc-cccCCCceecccccCCCccEEEEE------------Ec-cCcc--eEEEEEeCCcEEEEeeecC
Q 002405 177 SVAALSHHFPSNGLA-SVDTSGAFVSDHKFPISSAIIWLE------------LC-LPMR--LLFVLYSNGQLMSCSVSKK 240 (927)
Q Consensus 177 ~~i~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~i~~i~------------~~-~~~~--~~~~~s~dG~~~~~~~~d~ 240 (927)
.......+.++.+.. ...................+..+. +. +... ..+..++||.+.+.+....
T Consensus 207 ~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~ 286 (426)
T d1hzua2 207 PFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPK 286 (426)
T ss_dssp SSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTT
T ss_pred CccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeecccc
Confidence 112222333333211 111111111111111111111111 11 1111 1122234566666666555
Q ss_pred ccceeeecccceecCCCCeE-EEEEcCCCcEEEE-------EecCCeEEEEeccCCCcceEEEee-ecCCCCCCCCCCee
Q 002405 241 GLKLAEFIKIDKELGSGDAV-CASIAPEQQILAV-------GTRRGVVELYDLAESASLIRTVSL-YDWGYSMDDTGPVS 311 (927)
Q Consensus 241 ~~~~w~~~~~~~~~~h~~~v-~v~~sp~~~~la~-------g~~Dg~V~vwd~~~~~~~~~~l~~-~~~~~~~~h~~~V~ 311 (927)
..+.|+......+.+|...+ .++|+|++++|++ |+.|++|+|||+++ ++...++.. .++.....|.+.|.
T Consensus 287 ~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t-~~~~~~~~~~~~~~~~~~~~~rv~ 365 (426)
T d1hzua2 287 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN-LDAKYQVLPIAEWADLGEGAKRVV 365 (426)
T ss_dssp TCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTC-TTSCCEEECHHHHHCCCSSCCCEE
T ss_pred ccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCC-CCcCeEEeccchhcccCCCCccEE
Confidence 55555444444457898888 9999999999994 66789999999987 655544432 11111223677899
Q ss_pred EEEECCCCCEEE-EE----EcCCcEEEEEccCCeeEEEeccc
Q 002405 312 CIAWTPDNSAFA-VG----WKSRGLTVWSVSGCRLMSTIRQI 348 (927)
Q Consensus 312 ~l~~spdg~~La-sg----~~Dg~v~vW~~~~~~~~~~l~~~ 348 (927)
+++|||||+++. ++ +.|+.|+|||..+.++...++++
T Consensus 366 ~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~ 407 (426)
T d1hzua2 366 QPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 407 (426)
T ss_dssp EEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred EEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCC
Confidence 999999999764 43 35788999999999998888765
No 34
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.61 E-value=7.6e-14 Score=147.09 Aligned_cols=225 Identities=10% Similarity=0.073 Sum_probs=156.8
Q ss_pred EEEEeCCcEE-EEeeecCccceeeeccccee---cCCCCeEEEEEcCCCcEEE-EEecCCeEEEEeccCCCcceEEEeee
Q 002405 224 FVLYSNGQLM-SCSVSKKGLKLAEFIKIDKE---LGSGDAVCASIAPEQQILA-VGTRRGVVELYDLAESASLIRTVSLY 298 (927)
Q Consensus 224 ~~~s~dG~~~-~~~~~d~~~~~w~~~~~~~~---~~h~~~v~v~~sp~~~~la-~g~~Dg~V~vwd~~~~~~~~~~l~~~ 298 (927)
++++|||+++ +++..++.+.+||..+.+.. ..+..+..++++++++.++ ++..++.+.+|+..+ ++....+..
T Consensus 37 va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 114 (301)
T d1l0qa2 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS-NTVAGTVKT- 114 (301)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEEC-
T ss_pred EEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccccccccccccccccccccccceeeeccccc-ceeeeeccc-
Confidence 4568999976 56667889999998876543 4566666999999998654 566778999999987 666666554
Q ss_pred cCCCCCCCCCCeeEEEECCCCCEEEE-EEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc----
Q 002405 299 DWGYSMDDTGPVSCIAWTPDNSAFAV-GWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---- 373 (927)
Q Consensus 299 ~~~~~~~h~~~V~~l~~spdg~~Las-g~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---- 373 (927)
.....+++|+|||..++. +..++.+.+|+..+......+..+ .....++++|++ ..+..+.
T Consensus 115 --------~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~ 180 (301)
T d1l0qa2 115 --------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--RSPKGIAVTPDG----TKVYVANFDSM 180 (301)
T ss_dssp --------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC--SSEEEEEECTTS----SEEEEEETTTT
T ss_pred --------cccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC--CCceEEEeeccc----cceeeeccccc
Confidence 456789999999997755 556788999999998888877654 446778888887 4333222
Q ss_pred eeEEEcCCCceEEEEEcCCcceE-EEEec-cceeeec---ccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCccc
Q 002405 374 SMMQWDEYGYRLYAIEEGSSERV-LIFSF-GKCCLNR---GVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSY 448 (927)
Q Consensus 374 ~~~~W~~~~~~l~~~~~~~~~~v-~~~~~-~~~~~s~---s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 448 (927)
....|.....++......+.... ..+.. ++.+..+ ..++++++||...++. ...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~--------------------~~~~ 240 (301)
T d1l0qa2 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI--------------------TARI 240 (301)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE--------------------EEEE
T ss_pred ccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeE--------------------EEEE
Confidence 56677777777766655443322 44555 5554433 3445678887543322 1111
Q ss_pred ccCCCceEEEEEccCCCEEE-EEeCCceE-EEEccCCcE
Q 002405 449 ISQNWPVQHVAASKDGMFLA-VAGLHGLI-LYDIRQKKW 485 (927)
Q Consensus 449 ~~~~~~I~~va~spdG~~la-~ag~dg~i-~wd~~s~~w 485 (927)
.+...+..++|||||++|. +++.++.+ +||+.+++.
T Consensus 241 -~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~ 278 (301)
T d1l0qa2 241 -PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI 278 (301)
T ss_dssp -ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred -cCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 2234578999999999875 56678999 999998863
No 35
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.60 E-value=1.3e-13 Score=145.28 Aligned_cols=264 Identities=11% Similarity=0.036 Sum_probs=152.2
Q ss_pred ccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEE-EecCcEEEEEEEEecCceeecCCCCCCCccce
Q 002405 38 SPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAV-VTSSLYLHIFKVQITEKSIQIGGKQPSGLFFI 116 (927)
Q Consensus 38 ~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav-~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~ 116 (927)
.+++|.|||.. .+..+.... ..+....++|||||++|++ +..++.|++||+...........+
T Consensus 10 ~~~~v~v~D~~-t~~~~~~i~-------~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~-------- 73 (301)
T d1l0qa2 10 ESDNISVIDVT-SNKVTATIP-------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-------- 73 (301)
T ss_dssp TTTEEEEEETT-TTEEEEEEE-------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS--------
T ss_pred CCCEEEEEECC-CCeEEEEEE-------CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecc--------
Confidence 67899999996 555444432 1233468999999998865 557889999998643321111100
Q ss_pred eeeEEeecccccccccceEEEeeccCCeEEEEec-CCcEEEEecCCccccceeecccCCCCcccccccccCCCCCc-ccc
Q 002405 117 KISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLS-DGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLA-SVD 194 (927)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~-dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~-~~~ 194 (927)
....-..+..++..++++.. ++.+.+++....... ..+. . ........+.++.... ...
T Consensus 74 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~~~dg~~~~~~~ 134 (301)
T d1l0qa2 74 --------------SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA-GTVK---T-GKSPLGLALSPDGKKLYVTN 134 (301)
T ss_dssp --------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-EEEE---C-SSSEEEEEECTTSSEEEEEE
T ss_pred --------------ccccccccccccccccccccccceeeecccccceee-eecc---c-cccceEEEeecCCCeeeeee
Confidence 01111245666776666655 445555444322211 1111 1 1112223334443321 111
Q ss_pred CCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCc-cceeeeccccee---cCCCCeEEEEEcCCCcE
Q 002405 195 TSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKG-LKLAEFIKIDKE---LGSGDAVCASIAPEQQI 270 (927)
Q Consensus 195 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~-~~~w~~~~~~~~---~~h~~~v~v~~sp~~~~ 270 (927)
........+.......+..+... .....+++++|++.++++..+.. ...|+....+.. ..+..+..++++++++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (301)
T d1l0qa2 135 NGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTK 213 (301)
T ss_dssp TTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSE
T ss_pred ccccceeeeeccccceeeecccC-CCceEEEeeccccceeeecccccccccccccceeeeecccccCCcceeeccccccc
Confidence 11111112222223333333222 22345677889888777765543 334443332221 23334448999999998
Q ss_pred EEEEecC---CeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEE-EEEEcCCcEEEEEccCCeeEEEec
Q 002405 271 LAVGTRR---GVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAF-AVGWKSRGLTVWSVSGCRLMSTIR 346 (927)
Q Consensus 271 la~g~~D---g~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~L-asg~~Dg~v~vW~~~~~~~~~~l~ 346 (927)
+++++.| ++|++||..+ ++.+..+.. .+.+.+++|||||++| ++++.|++|++||+.+++++.++.
T Consensus 214 ~~v~~~~~~~~~v~v~D~~t-~~~~~~~~~---------~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~ 283 (301)
T d1l0qa2 214 AYVTNVDKYFNTVSMIDTGT-NKITARIPV---------GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283 (301)
T ss_dssp EEEEEECSSCCEEEEEETTT-TEEEEEEEC---------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccccceeeeeeeeecCC-CeEEEEEcC---------CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 8776544 6899999987 666666654 3567999999999977 577788999999999999888875
Q ss_pred c
Q 002405 347 Q 347 (927)
Q Consensus 347 ~ 347 (927)
-
T Consensus 284 v 284 (301)
T d1l0qa2 284 V 284 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 36
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.60 E-value=2.6e-14 Score=160.36 Aligned_cols=299 Identities=9% Similarity=-0.020 Sum_probs=188.1
Q ss_pred EEEEeCCcEEEEeeecCccceeeeccccee--------cCCCCeE-EEEEcCCCcEE-EEEecCCeEEEEeccCCCcceE
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDKE--------LGSGDAV-CASIAPEQQIL-AVGTRRGVVELYDLAESASLIR 293 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~--------~~h~~~v-~v~~sp~~~~l-a~g~~Dg~V~vwd~~~~~~~~~ 293 (927)
+++||||+++++++.|+++++||..+.+.. .+|.+.+ +.+|||||++| |+++.+++|++||..+ ++.+.
T Consensus 67 v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t-~~~~~ 145 (432)
T d1qksa2 67 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-LEPKK 145 (432)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-CCEEE
T ss_pred EEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcc-cccee
Confidence 456999999999999999999997654321 2344455 66788999975 7888999999999987 77777
Q ss_pred EEeeecCC---CCCCCCCCeeEEEECCCCCEEE-EEEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccc
Q 002405 294 TVSLYDWG---YSMDDTGPVSCIAWTPDNSAFA-VGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPL 369 (927)
Q Consensus 294 ~l~~~~~~---~~~~h~~~V~~l~~spdg~~La-sg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l 369 (927)
.+...... ....+.+....+.+||||..++ +.+.++.+.+|+..+.+.......+.......++|+|++ ..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg----~~~ 221 (432)
T d1qksa2 146 IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH----RYF 221 (432)
T ss_dssp EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS----CEE
T ss_pred eeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCC----CEE
Confidence 66542211 1223566778899999998765 455679999999987654433222213456788999998 655
Q ss_pred cccc----eeEEEcCCCceEEEEEcC-----CcceEE--EEec-cceeeec-ccCCCeeeeeeeecCCeEEEeecCCCCc
Q 002405 370 MSGT----SMMQWDEYGYRLYAIEEG-----SSERVL--IFSF-GKCCLNR-GVSGMTYARQVIYGEDRLLVVQSEDTDE 436 (927)
Q Consensus 370 ~sg~----~~~~W~~~~~~l~~~~~~-----~~~~v~--~~~~-~~~~~s~-s~d~~~~~w~~~~~~~~~~~~~~~~~~~ 436 (927)
+.++ .+.+|+..+.++...... |..... ...- +....+. ..++++.+|...
T Consensus 222 ~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~---------------- 285 (432)
T d1qksa2 222 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD---------------- 285 (432)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC----------------
T ss_pred EEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccc----------------
Confidence 4433 778888888877666532 111111 1111 2222222 124444444321
Q ss_pred ceEEEeecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEEccCCcEEeeCCccceeeeEEEEEEeeCCEEEEEEee
Q 002405 437 LKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWLGKIIVVCNYI 515 (927)
Q Consensus 437 ~~w~~~~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd~~s~~w~~f~~~~~e~~~~v~~~~W~~~~li~~~~~ 515 (927)
+.....|.+.+...+++|+|..+++++.++.. +|+..+.. . ++....... .|.+..+.++
T Consensus 286 --------~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~------~-~~~~~~sv~-vpDg~~la~~--- 346 (432)
T d1qksa2 286 --------PEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLN------P-EAEISGSVA-VFDIKAMTGD--- 346 (432)
T ss_dssp --------TTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTC------S-SHHHHTCEE-EEEGGGCCCS---
T ss_pred --------cccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCC------C-CCCeeeEEE-EEechhhccc---
Confidence 33445688899999999999999999999888 99876532 1 111001111 2555555544
Q ss_pred cCCCeEEEEEeeCC---CCCccceeEEEecCCccEEEEccCCEEEEEE-----cCCeEEEEEE
Q 002405 516 DSSNTYELLFYPRY---HLDQSSLLCRKSLLAKPIVMDVYEDYILVTY-----RPFDVHIFHV 570 (927)
Q Consensus 516 ~~~~~~~l~l~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~l~v~~-----~d~~i~l~~~ 570 (927)
..+..+++|+.. .+.+..- . ..-+.++++|+++++.. .++.|.||+-
T Consensus 347 --s~d~~~k~w~~~~~~~l~~~~~---~---v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~ 401 (432)
T d1qksa2 347 --GSDPEFKTLPIAEWAGITEGQP---R---VVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 401 (432)
T ss_dssp --SSCCCEEEECHHHHHTCCSSCC---E---EEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred --ccCCceEecccccccccCCCCC---c---EEEeEECCCCCEEEEEEecCCCCCCcEEEEEC
Confidence 234567888652 2221110 0 00145789998887754 3577888853
No 37
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.57 E-value=2.5e-14 Score=154.03 Aligned_cols=295 Identities=9% Similarity=-0.001 Sum_probs=163.6
Q ss_pred EEEEecCeEEEEEc-cCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEE-ecCcEEEEEEEEecCce
Q 002405 25 IYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVV-TSSLYLHIFKVQITEKS 102 (927)
Q Consensus 25 v~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~-t~dg~l~i~~l~~~~~~ 102 (927)
++||++|++|++++ +++|.|||.. ....+..+.- .+.+...+++|+|||++++++ ..++.|.+||+..++..
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~-t~~~~~t~~~-----~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~ 75 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVA-SDTVYKSCVM-----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 75 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETT-TTEEEEEEEC-----SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECC-CCCEEEEEEc-----CCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeee
Confidence 46899999999985 7899999996 5554444431 122345699999999988654 57899999998644322
Q ss_pred eecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCcccccc
Q 002405 103 IQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAALS 182 (927)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~ 182 (927)
.......... . ......-.++++|++.++++..+.....+...... .... ..
T Consensus 76 ~~~~~~~~~~--------~-------~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~-~~i~------------~~ 127 (346)
T d1jmxb_ 76 FHANLSSVPG--------E-------VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP-PRLE------------VF 127 (346)
T ss_dssp EEEESCCSTT--------E-------EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECC-CEEE------------EE
T ss_pred eeeccccccc--------c-------cCCceEEEEEecCCCEEEEEecCCcceeeeeccCc-ceEE------------EE
Confidence 1111000000 0 00000113567788888777654322111000000 0000 00
Q ss_pred cccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee---cCC---
Q 002405 183 HHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGS--- 256 (927)
Q Consensus 183 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h--- 256 (927)
... .............+.....+..++||++++++ ..+.+|+..+++.. ..+
T Consensus 128 ~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 185 (346)
T d1jmxb_ 128 STA-------------------DGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNWN 185 (346)
T ss_dssp EGG-------------------GGGGBCCSEEEECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTCC
T ss_pred ecc-------------------cceeeeEEEeeeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCCCc
Confidence 000 00000000111222222233344555554432 22333333222111 001
Q ss_pred ------------------CCeE-----EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEE
Q 002405 257 ------------------GDAV-----CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCI 313 (927)
Q Consensus 257 ------------------~~~v-----~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l 313 (927)
...+ ...+.+....++++..++.+.+|+..+.......... |...+.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 257 (346)
T d1jmxb_ 186 RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD--------LTELYFTG 257 (346)
T ss_dssp CTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE--------CSSCEEEE
T ss_pred cceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeec--------ccceeEEE
Confidence 1111 1122234445566677778888998773333334445 78889999
Q ss_pred EECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEcCCCceEEEEEc
Q 002405 314 AWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLYAIEE 390 (927)
Q Consensus 314 ~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~~~~~ 390 (927)
.++|++..++.+.. +.+.+||..+++.+..+... ..+.+++|+||+ ..+.++. ++.+||.++++.+....
T Consensus 258 ~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~--~~~~~va~s~DG----~~l~v~~~d~~v~v~D~~t~~~i~~i~ 330 (346)
T d1jmxb_ 258 LRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLD--HTYYCVAFDKKG----DKLYLGGTFNDLAVFNPDTLEKVKNIK 330 (346)
T ss_dssp EECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECS--SCCCEEEECSSS----SCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCC--CCEEEEEEcCCC----CEEEEEeCCCcEEEEECccCCEEEEEE
Confidence 99999999888776 58999999999888877643 468899999999 6666554 89999999999887765
No 38
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.57 E-value=3.1e-14 Score=152.56 Aligned_cols=243 Identities=13% Similarity=0.032 Sum_probs=152.7
Q ss_pred cEEEEeeecCccceeeeccccee-----cCCCCeE-EEEEcCCCcEE-EEEecCCeEEEEeccCCCcceEEEeeecCCCC
Q 002405 231 QLMSCSVSKKGLKLAEFIKIDKE-----LGSGDAV-CASIAPEQQIL-AVGTRRGVVELYDLAESASLIRTVSLYDWGYS 303 (927)
Q Consensus 231 ~~~~~~~~d~~~~~w~~~~~~~~-----~~h~~~v-~v~~sp~~~~l-a~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~ 303 (927)
.++++++.|+++.+||..+.+.. ..+...+ +++|+|||+++ ++++.|++|.+||+.+ ++.+..+.....
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t-~~~~~~~~~~~~--- 77 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-GETLGRIDLSTP--- 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-CCEEEEEECCBT---
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCC-CcEEEEEecCCC---
Confidence 35777788888888998876543 2333444 89999999987 5778899999999998 777776665110
Q ss_pred CCCCCCeeEEEECCCCCEEEEEEc------------CCcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccc
Q 002405 304 MDDTGPVSCIAWTPDNSAFAVGWK------------SRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMS 371 (927)
Q Consensus 304 ~~h~~~V~~l~~spdg~~Lasg~~------------Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~s 371 (927)
..+...+..++|+|||+.++++.. +..+.+||..+++....+..+ ..+..++++|++ ..+..
T Consensus 78 ~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg----~~l~~ 151 (337)
T d1pbyb_ 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDG----SKLYG 151 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTS----SCEEE
T ss_pred cccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecccc--CCceEEEEcCCC----CEEEE
Confidence 012234567999999999988763 578899999998888877653 557889999998 55554
Q ss_pred cc-eeEEEcCCCceEEEEEcCCcce---------------------EEEEe----c-cceeeecccCCCeeeeeeeecCC
Q 002405 372 GT-SMMQWDEYGYRLYAIEEGSSER---------------------VLIFS----F-GKCCLNRGVSGMTYARQVIYGED 424 (927)
Q Consensus 372 g~-~~~~W~~~~~~l~~~~~~~~~~---------------------v~~~~----~-~~~~~s~s~d~~~~~w~~~~~~~ 424 (927)
++ ...+|+..++++......+... ..... . ......++.++.+.+|+...+..
T Consensus 152 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T d1pbyb_ 152 LGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp ESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred EcCCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE
Confidence 44 7778998888777665332100 00000 0 11111222223344444332221
Q ss_pred eEEEeecCC-------------------CCcceEEEe--ecCcccccCCCceEEEEEccCCCEEEEEeCCceE-EEEccC
Q 002405 425 RLLVVQSED-------------------TDELKILHL--NLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQ 482 (927)
Q Consensus 425 ~~~~~~~~~-------------------~~~~~w~~~--~~~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd~~s 482 (927)
......... .....|... +... ...+...+.+++|||||++|++++.+|.+ +||..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t 310 (337)
T d1pbyb_ 232 AMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIK-RVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEE-EEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred EEEEecCCCcceEEEEecccceEEEEccccEEEEECCCCcEEE-EEcCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 111111100 001112210 1111 12344567899999999999999999999 999988
Q ss_pred Cc
Q 002405 483 KK 484 (927)
Q Consensus 483 ~~ 484 (927)
++
T Consensus 311 ~~ 312 (337)
T d1pbyb_ 311 LE 312 (337)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 39
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.54 E-value=2.8e-12 Score=139.88 Aligned_cols=212 Identities=10% Similarity=-0.011 Sum_probs=120.1
Q ss_pred EEeCCcEEEEeee--cCccceeeecccceecCCCCeE-EEEEcCCCcE-EEEEecCCeEEEEeccCCCcceEEEeeecCC
Q 002405 226 LYSNGQLMSCSVS--KKGLKLAEFIKIDKELGSGDAV-CASIAPEQQI-LAVGTRRGVVELYDLAESASLIRTVSLYDWG 301 (927)
Q Consensus 226 ~s~dG~~~~~~~~--d~~~~~w~~~~~~~~~~h~~~v-~v~~sp~~~~-la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~ 301 (927)
+++||+.++.... +..+.+|+....+. ..+.... +++++|+++. +++++.||++.+|+... +...........
T Consensus 132 ~s~dg~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~-~~~~~~~~~~~~- 208 (373)
T d2madh_ 132 NTPNNADLLFFQFAAGPAVGLVVQGGSSD-DQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAG-GAAGAGLVGAML- 208 (373)
T ss_pred EEeCCCcEEEEEEcCCCceEEeeccCCeE-EEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCC-ceeeEEEeeecc-
Confidence 4566664443332 23444555544332 2233333 8899999875 57889999999999886 544444333110
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEE--eccccccceecceecCCCCCCcccccccceeEEEc
Q 002405 302 YSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMST--IRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD 379 (927)
Q Consensus 302 ~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~--l~~~~~~~v~s~~~sp~~~~~~~~l~sg~~~~~W~ 379 (927)
..++......+.+++++..++. +.++++.+|+..+...... ...+ ........+.|.. .....|.
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~ 275 (373)
T d2madh_ 209 -TAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDAL-SGGRKADTWRPGG----------WQQVAYL 275 (373)
T ss_pred -ccCccceeeeEEECCCceEEEe-cCCceEEEEEcCCCeEEEEEeeccc-cCcEEeeeeccCc----------ceeeEEe
Confidence 0112233456677777766654 4678999999877643322 1111 1111111111111 1222333
Q ss_pred CCCceEEEEEcCCcceEEEEec-cceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeecCcccccCCCceEEE
Q 002405 380 EYGYRLYAIEEGSSERVLIFSF-GKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHV 458 (927)
Q Consensus 380 ~~~~~l~~~~~~~~~~v~~~~~-~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~I~~v 458 (927)
..+.. ++.... +...++...++.+.+|+...++. .....+...+..+
T Consensus 276 ~d~~~-----------~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~---------------------~~~~~~~~~~~~~ 323 (373)
T d2madh_ 276 KSSDG-----------IYLLTSEQSAWKLHAAAKEVTSVTGLVGQT---------------------SSQISLGHDVDAI 323 (373)
T ss_pred cCCCe-----------EEEecCCCceEEeecCCCeEEEEECCCCcE---------------------EEEecCCCCeeEE
Confidence 33322 222222 44556677777888888665443 1122345568899
Q ss_pred EEccCCCE--EEEEeCCceE-EEEccCCcE
Q 002405 459 AASKDGMF--LAVAGLHGLI-LYDIRQKKW 485 (927)
Q Consensus 459 a~spdG~~--la~ag~dg~i-~wd~~s~~w 485 (927)
+|||||+. +++++.|+.+ +||+.+++-
T Consensus 324 a~spDG~~~l~vt~~~d~~v~v~D~~tg~~ 353 (373)
T d2madh_ 324 SVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence 99999994 4678899999 999999873
No 40
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.52 E-value=3.3e-13 Score=144.42 Aligned_cols=275 Identities=12% Similarity=0.053 Sum_probs=150.0
Q ss_pred eEEEEEecCeEEEEE--ccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEecC
Q 002405 23 QIIYFKVNNGLLLIA--SPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITE 100 (927)
Q Consensus 23 ~iv~fs~dg~lla~~--~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~~~ 100 (927)
..++|||||+++.++ .++.|.+||.. .+..+......... ........++|+||++.++++..+.....|......
T Consensus 37 ~~i~~spDg~~l~v~~~~~~~v~v~D~~-t~~~~~~~~~~~~~-~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T d1pbyb_ 37 MVPMVAPGGRIAYATVNKSESLVKIDLV-TGETLGRIDLSTPE-ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETT-TCCEEEEEECCBTT-EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred cEEEECCCCCEEEEEECCCCeEEEEECC-CCcEEEEEecCCCc-ccccceeeEEEcCCCcEEEEeecCCcceeeeccccc
Confidence 348999999976544 47899999996 65555554433221 122344689999999999998876655555443322
Q ss_pred ceeecC-CCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccceeecccCCCCccc
Q 002405 101 KSIQIG-GKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVA 179 (927)
Q Consensus 101 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~~~~~~~~~~~~~i 179 (927)
...... .... .... .... .....-.++++++..++++..+ +..+++...... ..+. ... ..
T Consensus 115 ~~~~~~d~~~~--~~~~----~~~~-----~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~-~~~~---~~~-~~ 176 (337)
T d1pbyb_ 115 TRVALYDAETL--SRRK----AFEA-----PRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLV-EDKP---IQS-WE 176 (337)
T ss_dssp CEEEEEETTTT--EEEE----EEEC-----CSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEE-EEEC---STT-TT
T ss_pred cceeeccccCC--eEEE----eccc-----cCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEE-EEee---cCC-cc
Confidence 221110 0000 0000 0000 1111224677888888887644 444444322111 1110 000 00
Q ss_pred ccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeeccccee----cC
Q 002405 180 ALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKE----LG 255 (927)
Q Consensus 180 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~----~~ 255 (927)
....+.++... ............... .....+.........+..+..|+...+... ..
T Consensus 177 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T d1pbyb_ 177 AETYAQPDVLA-----------VWNQHESSGVMATPF-------YTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp TTTBCCCBCCC-----------CCCCCTTTTEEEEEE-------EEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred ccceecCCcce-----------eeccccccceeeeee-------eeeeeccceeeecccCccEEEEEcCCCcEEEEEecC
Confidence 00001111100 000011111111100 011112221122222333444544433211 34
Q ss_pred CCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEE
Q 002405 256 SGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVW 334 (927)
Q Consensus 256 h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW 334 (927)
+.... +++++|++.+++++ ++.|++||+.+ ++.+..+. +.+.+.+++|||||++|++|+.|++|+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~-~~~~~~~~---------~~~~~~~~~~s~dG~~l~v~~~~~~i~v~ 306 (337)
T d1pbyb_ 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-NASIKRVP---------LPHSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-TEEEEEEE---------CSSCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred CCcceEEEEecccceEEEEc--cccEEEEECCC-CcEEEEEc---------CCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 55566 89999999998765 58999999988 66666654 46678999999999999999999999999
Q ss_pred EccCCeeEEEecc
Q 002405 335 SVSGCRLMSTIRQ 347 (927)
Q Consensus 335 ~~~~~~~~~~l~~ 347 (927)
|+.+.+.+.+++-
T Consensus 307 D~~t~~~v~~i~~ 319 (337)
T d1pbyb_ 307 DAETLEKKGQVDL 319 (337)
T ss_dssp ETTTCCEEEEEEC
T ss_pred ECCCCcEEEEEEC
Confidence 9999888887764
No 41
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.48 E-value=6.2e-13 Score=142.75 Aligned_cols=294 Identities=13% Similarity=-0.010 Sum_probs=170.5
Q ss_pred EEEeCCcEEEEeeecCccceeeeccccee----cCCCCeE-EEEEcCCCcEE-EEEecCCeEEEEeccCCCcceEEEeee
Q 002405 225 VLYSNGQLMSCSVSKKGLKLAEFIKIDKE----LGSGDAV-CASIAPEQQIL-AVGTRRGVVELYDLAESASLIRTVSLY 298 (927)
Q Consensus 225 ~~s~dG~~~~~~~~d~~~~~w~~~~~~~~----~~h~~~v-~v~~sp~~~~l-a~g~~Dg~V~vwd~~~~~~~~~~l~~~ 298 (927)
+++++|+++++++.++++.+||..+.+.. ..|.... +++|+|||+++ ++++.++.|++||+.+ ++.+..+...
T Consensus 3 a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t-~~~~~~~~~~ 81 (346)
T d1jmxb_ 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-CKNTFHANLS 81 (346)
T ss_dssp CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEESC
T ss_pred cCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCcc-Ceeeeeeccc
Confidence 46899999999999999999999887654 2445445 99999999986 5667899999999987 6666655441
Q ss_pred cCCCCCCCCCCeeEEEECCCCCEEEEEE------------cCCcEEEEEccCCeeEEEecccc-ccceecceecCCCCCC
Q 002405 299 DWGYSMDDTGPVSCIAWTPDNSAFAVGW------------KSRGLTVWSVSGCRLMSTIRQIS-LSSISSPIVKPNQDCK 365 (927)
Q Consensus 299 ~~~~~~~h~~~V~~l~~spdg~~Lasg~------------~Dg~v~vW~~~~~~~~~~l~~~~-~~~v~s~~~sp~~~~~ 365 (927)
.. ...+...+..++|||||++++++. .++.+.+|+..+++....+..+. ...+..+.+++++
T Consensus 82 ~~--~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 156 (346)
T d1jmxb_ 82 SV--PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG--- 156 (346)
T ss_dssp CS--TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS---
T ss_pred cc--ccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCC---
Confidence 11 001223467899999999998875 36778889887765443333221 1234445555655
Q ss_pred cccccccceeEEEcCCCceEEEEEcCCcceE-EEEeccceeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeec
Q 002405 366 YEPLMSGTSMMQWDEYGYRLYAIEEGSSERV-LIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNL 444 (927)
Q Consensus 366 ~~~l~sg~~~~~W~~~~~~l~~~~~~~~~~v-~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~ 444 (927)
..+.++....+|+..+++.......+.... ..+++ ++. .+|..........
T Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~----------------- 208 (346)
T d1jmxb_ 157 -SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAP---------DVL-YFWPHQSPRHEFS----------------- 208 (346)
T ss_dssp -CEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCC---------BCC-CCCCCCCTTCEEE-----------------
T ss_pred -EEEEeCCcceEEEccCCCEEEEEecCCCccceEEec---------ccc-EEEEEecCCCceE-----------------
Confidence 555565677888888777766654332110 11111 111 1111111111000
Q ss_pred CcccccCCCceEEEEEccCCCEEEEEeCCceE-EEEccCCcEEeeCCccceeeeEEEEEEee--CCEEEEEEeecCCCeE
Q 002405 445 PVSYISQNWPVQHVAASKDGMFLAVAGLHGLI-LYDIRQKKWRVFGDITQEQKIQSKGLLWL--GKIIVVCNYIDSSNTY 521 (927)
Q Consensus 445 ~~~~~~~~~~I~~va~spdG~~la~ag~dg~i-~wd~~s~~w~~f~~~~~e~~~~v~~~~W~--~~~li~~~~~~~~~~~ 521 (927)
.......+.+++..++++..++.+ +|+..++.........+. ..+....+. +..++.+ ...
T Consensus 209 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------~~~ 272 (346)
T d1jmxb_ 209 --------MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLT--ELYFTGLRSPKDPNQIYG------VLN 272 (346)
T ss_dssp --------EEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECS--SCEEEEEECSSCTTEEEE------EES
T ss_pred --------eeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeeccc--ceeEEEEEeCCCCEEEEe------cCC
Confidence 001112334456666777777777 999888764322111111 113333443 2233322 123
Q ss_pred EEEEeeCCCCCccceeEEEecCC--ccEEEEccCCEEEEEEcCCeEEEEEEE
Q 002405 522 ELLFYPRYHLDQSSLLCRKSLLA--KPIVMDVYEDYILVTYRPFDVHIFHVK 571 (927)
Q Consensus 522 ~l~l~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~l~v~~~d~~i~l~~~~ 571 (927)
.+++|+.. ....+....... .-+.++++|..|+++..|++|.+|+.+
T Consensus 273 ~v~v~d~~---~~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~ 321 (346)
T d1jmxb_ 273 RLAKYDLK---QRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321 (346)
T ss_dssp EEEEEETT---TTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred eEEEEECC---CCcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECc
Confidence 67888763 223333333333 246789999999999999999999763
No 42
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.45 E-value=2.4e-12 Score=139.21 Aligned_cols=263 Identities=10% Similarity=0.032 Sum_probs=143.5
Q ss_pred CceEEEEEecCeEEEEEc-----------cCeEEEeecCCceeEEEEEeeChHhhhhc-ccccEEEEcCCccEEEEEe--
Q 002405 21 SQQIIYFKVNNGLLLIAS-----------PCHIELWSSSQHKVRLGKYKRDSESVQRE-GENLQAVWSPDTKLIAVVT-- 86 (927)
Q Consensus 21 ~~~iv~fs~dg~lla~~~-----------~~~v~IW~~~~~~~~l~~~~r~~~sl~~~-G~~~~v~wspDg~~Lav~t-- 86 (927)
..+.++|||||++|++++ ++.|+|||.. .+..+............. .....++|+|||+.++++.
T Consensus 48 ~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~ 126 (355)
T d2bbkh_ 48 FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV-TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 126 (355)
T ss_dssp SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECC-CCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCC
Confidence 345689999999887653 5689999996 655555543322111111 2235689999999988875
Q ss_pred cCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEecCCccccc
Q 002405 87 SSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGA 166 (927)
Q Consensus 87 ~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~w~~~~~~~ 166 (927)
.+..+.+|+.............. ............+..+.||....+.........
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~ 182 (355)
T d2bbkh_ 127 PAPAVGVVDLEGKAFKRMLDVPD------------------------CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE 182 (355)
T ss_dssp SSCEEEEEETTTTEEEEEEECCS------------------------EEEEEEEETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred CCceeeeeecCCCcEeeEEecCC------------------------cceEeecCCcceEEEcCCCCEEEEEecCCCeEE
Confidence 45678888765332111110000 000111112222333344433332211111000
Q ss_pred eeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceee
Q 002405 167 FELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAE 246 (927)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~ 246 (927)
.. . ... ....+...+....+.+....++..+.+|++++.....+.+..++
T Consensus 183 ~~-~----------~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 232 (355)
T d2bbkh_ 183 IT-H----------TEV-------------------FHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP 232 (355)
T ss_dssp EE-E----------CCC-------------------CSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECC
T ss_pred EE-e----------ccc-------------------ccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEe
Confidence 00 0 000 00000001111123333334444455666666555555544443
Q ss_pred eccccee----cC-CCCeE-EEEEcCCCcEEEEEecCC----------eEEEEeccCCCcceEEEeeecCCCCCCCCCCe
Q 002405 247 FIKIDKE----LG-SGDAV-CASIAPEQQILAVGTRRG----------VVELYDLAESASLIRTVSLYDWGYSMDDTGPV 310 (927)
Q Consensus 247 ~~~~~~~----~~-h~~~v-~v~~sp~~~~la~g~~Dg----------~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V 310 (927)
....... .+ ..... .++++|++..++....++ +|.+||..+ ++.+.++.. .+.+
T Consensus 233 ~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t-~~~~~~~~~---------~~~~ 302 (355)
T d2bbkh_ 233 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM---------GHEI 302 (355)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE---------EEEE
T ss_pred ccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCC-CcEEEEecC---------CCCE
Confidence 3221110 00 01122 588999999888776543 799999987 777766654 3558
Q ss_pred eEEEECCCCC--EEEEEEcCCcEEEEEccCCeeEEEeccc
Q 002405 311 SCIAWTPDNS--AFAVGWKSRGLTVWSVSGCRLMSTIRQI 348 (927)
Q Consensus 311 ~~l~~spdg~--~Lasg~~Dg~v~vW~~~~~~~~~~l~~~ 348 (927)
.+++|||||+ ++++++.|++|.|||+.+++.+.++.++
T Consensus 303 ~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~ 342 (355)
T d2bbkh_ 303 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342 (355)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred EEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCc
Confidence 8999999998 4566777999999999999999998765
No 43
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.43 E-value=4e-12 Score=137.38 Aligned_cols=299 Identities=10% Similarity=0.011 Sum_probs=177.1
Q ss_pred EEEEEecCeEEEEEc------cCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEe----------c
Q 002405 24 IIYFKVNNGLLLIAS------PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVT----------S 87 (927)
Q Consensus 24 iv~fs~dg~lla~~~------~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t----------~ 87 (927)
+.+.||||+.+++.. .+++.+||.. .+..+.... -|....++|||||+.|++++ .
T Consensus 6 ~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~-tg~~~~~~~--------~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~ 76 (355)
T d2bbkh_ 6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGE-AGRVIGMID--------GGFLPNPVVADDGSFIAHASTVFSRIARGER 76 (355)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETT-TTEEEEEEE--------ECSSCEEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred eEeeCCCCCEEEEEecccCCCcCeEEEEECC-CCcEEEEEE--------CCCCCceEEcCCCCEEEEEeCCCccccccCC
Confidence 346789998766542 4479999996 666555442 13445799999999998864 3
Q ss_pred CcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecC--CcEEEEecCCcccc
Q 002405 88 SLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSD--GSLYSISWKGEFYG 165 (927)
Q Consensus 88 dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~d--g~i~~~~w~~~~~~ 165 (927)
+|.|++||+..+........+..... . .+......+++++++.++++... ..+.+++.. ...
T Consensus 77 d~~v~v~D~~t~~~~~~~~~~~~~~~-------------~-~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~--~~~ 140 (355)
T d2bbkh_ 77 TDYVEVFDPVTLLPTADIELPDAPRF-------------L-VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE--GKA 140 (355)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCC-------------C-BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT--TTE
T ss_pred CCEEEEEECCCCCEEEEEecCCccee-------------e-cCCCCceEEEecCCCeeEEecCCCCceeeeeecC--CCc
Confidence 68899999865442211111110000 0 01111123677888888877543 344444332 221
Q ss_pred ceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeec-Cccce
Q 002405 166 AFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSK-KGLKL 244 (927)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d-~~~~~ 244 (927)
... . .. . .... ..+.......+++++||+.++....+ +.+..
T Consensus 141 ~~~------------~--------------------~~-~--~~~~--~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~ 183 (355)
T d2bbkh_ 141 FKR------------M--------------------LD-V--PDCY--HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 183 (355)
T ss_dssp EEE------------E--------------------EE-C--CSEE--EEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred Eee------------E--------------------Ee-c--CCcc--eEeecCCcceEEEcCCCCEEEEEecCCCeEEE
Confidence 110 0 00 0 0000 01222234456788999987765543 33444
Q ss_pred eeecccceecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcc--eEEEeeecCC--CCCCCCCCeeEEEECCCC
Q 002405 245 AEFIKIDKELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASL--IRTVSLYDWG--YSMDDTGPVSCIAWTPDN 319 (927)
Q Consensus 245 w~~~~~~~~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~--~~~l~~~~~~--~~~~h~~~V~~l~~spdg 319 (927)
.+..... ..+...+ +.++++++..++.++.+|.+.+|++.. +.. +......... ......+....++++|||
T Consensus 184 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~ 260 (355)
T d2bbkh_ 184 THTEVFH--PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS-GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 260 (355)
T ss_dssp EECCCCS--CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTT-SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred Eeccccc--ceecceeeeccccCCCCeEEEecCCCeEEEEecCC-CcEEEEeccCCcccceEeeeeeccceEEEEEeCCC
Confidence 4333221 3445555 678888999999999999999999986 322 1111110000 000011234568999999
Q ss_pred CEEEEEEcCC----------cEEEEEccCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEcCCCceEE
Q 002405 320 SAFAVGWKSR----------GLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRLY 386 (927)
Q Consensus 320 ~~Lasg~~Dg----------~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l~ 386 (927)
..++....++ .|.+||..+++.+.++..+ ..+.+++|+|++ +...++++. ++.+||..+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~--~~~~~~a~spDG--~~~l~v~~~~d~~i~v~D~~tg~~~ 336 (355)
T d2bbkh_ 261 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDE--KPLLYALSTGDKTLYIHDAESGEEL 336 (355)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSS--SCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC--CCEEEEEEcCCC--CeEEEEEECCCCEEEEEECCCCCEE
Confidence 9888776543 6999999999888887643 457889999998 111344442 8999999999988
Q ss_pred EEEcC
Q 002405 387 AIEEG 391 (927)
Q Consensus 387 ~~~~~ 391 (927)
..+.+
T Consensus 337 ~~i~~ 341 (355)
T d2bbkh_ 337 RSVNQ 341 (355)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 87754
No 44
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.41 E-value=1.1e-11 Score=132.32 Aligned_cols=271 Identities=13% Similarity=0.126 Sum_probs=149.3
Q ss_pred EEEEeeecCccceeeecccce---e--cCCCCeE-EEEEcCCCcEEEE-EecCCeEEEEeccCCCcceEEEeeecCCCCC
Q 002405 232 LMSCSVSKKGLKLAEFIKIDK---E--LGSGDAV-CASIAPEQQILAV-GTRRGVVELYDLAESASLIRTVSLYDWGYSM 304 (927)
Q Consensus 232 ~~~~~~~d~~~~~w~~~~~~~---~--~~h~~~v-~v~~sp~~~~la~-g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~ 304 (927)
++++++.++++++|+...... . .+|.+.+ .++|||||++|++ +..|+.|++|+++. .....++....
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~-~~~~~~~~~~~----- 79 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP-DDGALTFAAES----- 79 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECT-TTCCEEEEEEE-----
T ss_pred EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeC-CCCcEEEeeec-----
Confidence 456677888889998754221 1 3567777 9999999998855 45589999999986 33222222211
Q ss_pred CCCCCeeEEEECCCCCEEEEEEc-CCcEEEEEccCCeeEEEecc-ccccceecceecCCCCCCcccccccc----eeEEE
Q 002405 305 DDTGPVSCIAWTPDNSAFAVGWK-SRGLTVWSVSGCRLMSTIRQ-ISLSSISSPIVKPNQDCKYEPLMSGT----SMMQW 378 (927)
Q Consensus 305 ~h~~~V~~l~~spdg~~Lasg~~-Dg~v~vW~~~~~~~~~~l~~-~~~~~v~s~~~sp~~~~~~~~l~sg~----~~~~W 378 (927)
.+...+..++|+|||++|++++. ++.+.+|+............ .+...+.++.++|++ ..+..+. .+..|
T Consensus 80 ~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~----~~~~~~~~~~~~i~~~ 155 (333)
T d1ri6a_ 80 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN----RTLWVPALKQDRICLF 155 (333)
T ss_dssp ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS----SEEEEEEGGGTEEEEE
T ss_pred ccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecc----eeeeccccccceeeEE
Confidence 03455678999999999999885 57899999877654443321 225567889999998 4443332 56666
Q ss_pred cCCCceEEEEE------c--CCcceEEEEec-cceee-ecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEe-ecCcc
Q 002405 379 DEYGYRLYAIE------E--GSSERVLIFSF-GKCCL-NRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHL-NLPVS 447 (927)
Q Consensus 379 ~~~~~~l~~~~------~--~~~~~v~~~~~-~~~~~-s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~-~~~~~ 447 (927)
+.......... . +....-..++. ++... +....+...++....... ........ ..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~~~~~~~~~~~~ 225 (333)
T d1ri6a_ 156 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG----------NIECVQTLDMMPEN 225 (333)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS----------CCEEEEEEECSCTT
T ss_pred EeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeeccccc----------ceeeeeeeeeeecC
Confidence 65432211110 0 11111233333 22222 222222233332211111 01111111 12222
Q ss_pred cccCCCceEEEEEccCCCEEEEEeC-CceE-EEEccCCc--EEeeCCccceeeeEEEEEEee--CCEEEEEEeecCCCeE
Q 002405 448 YISQNWPVQHVAASKDGMFLAVAGL-HGLI-LYDIRQKK--WRVFGDITQEQKIQSKGLLWL--GKIIVVCNYIDSSNTY 521 (927)
Q Consensus 448 ~~~~~~~I~~va~spdG~~la~ag~-dg~i-~wd~~s~~--w~~f~~~~~e~~~~v~~~~W~--~~~li~~~~~~~~~~~ 521 (927)
.. ........+++|||+++.+++. ++.+ +|++.... .+..+.. .......+++|. |+++++++. ...
T Consensus 226 ~~-~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~a~spDGk~l~va~~----~~~ 298 (333)
T d1ri6a_ 226 FS-DTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ--PTETQPRGFNVDHSGKYLIAAGQ----KSH 298 (333)
T ss_dssp CC-SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE--ECSSSCCCEEECTTSSEEEEECT----TTC
T ss_pred CC-ccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEe--CCCCCeeEEEEeCCCCEEEEEEC----CCC
Confidence 22 2334567899999998877655 4566 88875432 1111100 000113357775 667777632 346
Q ss_pred EEEEeeCC
Q 002405 522 ELLFYPRY 529 (927)
Q Consensus 522 ~l~l~~~~ 529 (927)
.+++|..+
T Consensus 299 ~v~v~~id 306 (333)
T d1ri6a_ 299 HISVYEIV 306 (333)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 79999663
No 45
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.39 E-value=9.3e-11 Score=124.91 Aligned_cols=282 Identities=13% Similarity=0.105 Sum_probs=157.5
Q ss_pred EEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEe-cCcEEEEEEEEecCceeecCCCCCC
Q 002405 33 LLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVT-SSLYLHIFKVQITEKSIQIGGKQPS 111 (927)
Q Consensus 33 lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t-~dg~l~i~~l~~~~~~~~~~~~~~~ 111 (927)
+++...+++|+||+++..+ .+....+ +++.|.+..++|||||++|+++. .++.|++|++..........
T Consensus 7 ~v~~~~~~~I~v~~~~~~~-~l~~~~~----~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~----- 76 (333)
T d1ri6a_ 7 YIASPESQQIHVWNLNHEG-ALTLTQV----VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA----- 76 (333)
T ss_dssp EEEEGGGTEEEEEEECTTS-CEEEEEE----EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-----
T ss_pred EEECCCCCcEEEEEEcCCC-CeEEEEE----EcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEe-----
Confidence 3444468899999986222 2222221 23446778999999999997665 47999999997543221110
Q ss_pred CccceeeeEEeecccccccccceEEEeeccCCeEEEEec-CCcEEEEecCCccccceeecccCCCCcccccccccCCCCC
Q 002405 112 GLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLS-DGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGL 190 (927)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~-dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 190 (927)
.... .+....-.+++++++.++++.. ++.+..+.++........
T Consensus 77 ------------~~~~-~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~---------------------- 121 (333)
T d1ri6a_ 77 ------------AESA-LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV---------------------- 121 (333)
T ss_dssp ------------EEEE-CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE----------------------
T ss_pred ------------eecc-cCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecc----------------------
Confidence 0000 0011111367889999999876 557776665533211110
Q ss_pred ccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeee-cCccceeeecccce---------ecCCCCeE
Q 002405 191 ASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVS-KKGLKLAEFIKIDK---------ELGSGDAV 260 (927)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~-d~~~~~w~~~~~~~---------~~~h~~~v 260 (927)
....+...+. .+.+++||+.++++.. +..+.+|+...... ........
T Consensus 122 ------------~~~~~~~~~~----------~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p 179 (333)
T d1ri6a_ 122 ------------DVVEGLDGCH----------SANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGP 179 (333)
T ss_dssp ------------EEECCCTTBC----------CCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCE
T ss_pred ------------cccCCCccce----------EEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCc
Confidence 0001111122 2345777776665553 33455555432211 12233344
Q ss_pred -EEEEcCCCcEEEEE-ecCCeEEEEeccCCCcceEEE-eeecCCCCCCCCCCeeEEEECCCCCEEEEE-EcCCcEEEEEc
Q 002405 261 -CASIAPEQQILAVG-TRRGVVELYDLAESASLIRTV-SLYDWGYSMDDTGPVSCIAWTPDNSAFAVG-WKSRGLTVWSV 336 (927)
Q Consensus 261 -~v~~sp~~~~la~g-~~Dg~V~vwd~~~~~~~~~~l-~~~~~~~~~~h~~~V~~l~~spdg~~Lasg-~~Dg~v~vW~~ 336 (927)
.++|++++..+... ...+...+|+........... .....+...........++++|||+++.++ ..++++.+|++
T Consensus 180 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~ 259 (333)
T d1ri6a_ 180 RHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSV 259 (333)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEE
Confidence 89999999887654 456788899876522222211 111112222244567889999999976655 45689999998
Q ss_pred cCCeeEEEeccc--cccceecceecCCCCCCcccc-cccc---eeEEE--cCCCceE
Q 002405 337 SGCRLMSTIRQI--SLSSISSPIVKPNQDCKYEPL-MSGT---SMMQW--DEYGYRL 385 (927)
Q Consensus 337 ~~~~~~~~l~~~--~~~~v~s~~~sp~~~~~~~~l-~sg~---~~~~W--~~~~~~l 385 (927)
...........+ ......+++|+|++ +.+ +++. ++.+| +.+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~p~~~a~spDG----k~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 260 SEDGSVLSKEGFQPTETQPRGFNVDHSG----KYLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp CTTSCCEEEEEEEECSSSCCCEEECTTS----SEEEEECTTTCEEEEEEEETTTTEE
T ss_pred cCCCCEEEEEEEeCCCCCeeEEEEeCCC----CEEEEEECCCCeEEEEEEECCCCcE
Confidence 654322222221 12446778999998 544 3332 66776 4455554
No 46
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.35 E-value=1.1e-10 Score=126.89 Aligned_cols=261 Identities=8% Similarity=-0.009 Sum_probs=141.0
Q ss_pred CceEEEEEecCeEEEEEc-----------cCeEEEeecCCceeEEEEEeeChHhh-hhcccccEEEEcCCccEEEEEe--
Q 002405 21 SQQIIYFKVNNGLLLIAS-----------PCHIELWSSSQHKVRLGKYKRDSESV-QREGENLQAVWSPDTKLIAVVT-- 86 (927)
Q Consensus 21 ~~~iv~fs~dg~lla~~~-----------~~~v~IW~~~~~~~~l~~~~r~~~sl-~~~G~~~~v~wspDg~~Lav~t-- 86 (927)
..+.++|||||++|++++ ++.|.|||.. ....+.......... .-......+.|+||++.+++..
T Consensus 67 ~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~ 145 (373)
T d2madh_ 67 FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV-TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred CCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECC-CCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEc
Confidence 345689999999998874 3679999996 554444332211110 0112234689999999877765
Q ss_pred cCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeE-EEEecCCcEEEEecCCcccc
Q 002405 87 SSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHM-LLGLSDGSLYSISWKGEFYG 165 (927)
Q Consensus 87 ~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l-~v~~~dg~i~~~~w~~~~~~ 165 (927)
.++.+.+|+.......... . ...-..+.++++.+ ++...+|.+.+++.......
T Consensus 146 ~~~~~~~~~~~~~~~~~~~-------------------~------~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~ 200 (373)
T d2madh_ 146 AGPAVGLVVQGGSSDDQLL-------------------S------SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAG 200 (373)
T ss_pred CCCceEEeeccCCeEEEEe-------------------c------cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceee
Confidence 3456777776532210000 0 00112455666655 45677888887665433221
Q ss_pred ceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCcccee
Q 002405 166 AFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLA 245 (927)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w 245 (927)
.... ...+ ............+++. ...++.+.+++.++.......+...
T Consensus 201 ~~~~-----------~~~~-------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~ 249 (373)
T d2madh_ 201 AGLV-----------GAML-------------------TAAQNLLTQPAQANKS-GRIVWPVYSGKILQADISAAGATNK 249 (373)
T ss_pred EEEe-----------eecc-------------------ccCccceeeeEEECCC-ceEEEecCCceEEEEEcCCCeEEEE
Confidence 1100 0000 0000011111122211 1223334444444443333322211
Q ss_pred ---eeccccee--cCCCCeE-EEEEcCC----------CcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCC
Q 002405 246 ---EFIKIDKE--LGSGDAV-CASIAPE----------QQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGP 309 (927)
Q Consensus 246 ---~~~~~~~~--~~h~~~v-~v~~sp~----------~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~ 309 (927)
+....... ....... .++++|+ +..++++..++.+.+||..+ ++.+..+. +...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t-~~~~~~~~---------~~~~ 319 (373)
T d2madh_ 250 APIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQIS---------LGHD 319 (373)
T ss_pred EeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCC-CcEEEEec---------CCCC
Confidence 11110000 0000111 3344444 44455667788999999987 66666553 4667
Q ss_pred eeEEEECCCCCE--EEEEEcCCcEEEEEccCCeeEEEeccc
Q 002405 310 VSCIAWTPDNSA--FAVGWKSRGLTVWSVSGCRLMSTIRQI 348 (927)
Q Consensus 310 V~~l~~spdg~~--Lasg~~Dg~v~vW~~~~~~~~~~l~~~ 348 (927)
+.+++|||||+. +++++.|++|+|||+.+++.+.++.++
T Consensus 320 ~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~ 360 (373)
T d2madh_ 320 VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVEL 360 (373)
T ss_pred eeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCC
Confidence 899999999984 478889999999999999999999876
No 47
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.25 E-value=5.2e-11 Score=129.83 Aligned_cols=258 Identities=9% Similarity=-0.018 Sum_probs=141.9
Q ss_pred ceEEEEEecCeEEEEEc-----------cCeEEEeecCCceeEEEEEeeChHhhhhcc-cccEEEEcCCccEEEEEe-cC
Q 002405 22 QQIIYFKVNNGLLLIAS-----------PCHIELWSSSQHKVRLGKYKRDSESVQREG-ENLQAVWSPDTKLIAVVT-SS 88 (927)
Q Consensus 22 ~~iv~fs~dg~lla~~~-----------~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G-~~~~v~wspDg~~Lav~t-~d 88 (927)
.+.+++||||+.+++++ +++|.+||.. ...++.............| .-..++|||||++|+++. .+
T Consensus 67 ~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~-t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~ 145 (368)
T d1mdah_ 67 LSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp TCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT-TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred CCcceECCCCCEEEEEcccCccccccccCCeEEEEECC-CCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCC
Confidence 34688999999888764 4579999995 6655555432211111112 124699999999999886 57
Q ss_pred cEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEee-ccCCeEEEEecCCcEEEEecCCccccce
Q 002405 89 LYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIV-SDNKHMLLGLSDGSLYSISWKGEFYGAF 167 (927)
Q Consensus 89 g~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~-~~~~~l~v~~~dg~i~~~~w~~~~~~~~ 167 (927)
+.+.+||+...+.......+ .. . .+. ......+..+.||.+..+..........
T Consensus 146 ~~v~~~d~~~~~~~~~~~~~---------------------~~--~--~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~ 200 (368)
T d1mdah_ 146 SAAAGLSVPGASDDQLTKSA---------------------SC--F--HIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp SCEEEEEETTTEEEEEEECS---------------------SC--C--CCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred CeEEEEECCCCcEeEEeecc---------------------Cc--c--eEccCCCceEEEEcCCCCEEEEEecCCceeee
Confidence 89999998743311111000 00 0 011 1123344445566665554443222111
Q ss_pred eecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeee
Q 002405 168 ELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEF 247 (927)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~ 247 (927)
... ... ...+...+....+.+. ....+..+|+.++.....+.+..++.
T Consensus 201 ~~~----------~~~--------------------~~~~~~~~~~~~~~~~--g~~~~~~~~~v~~~~~~~~~~~~~~~ 248 (368)
T d1mdah_ 201 IVG----------AQC--------------------TGAQNCSSQAAQANYP--GMLVWAVASSILQGDIPAAGATMKAA 248 (368)
T ss_dssp ECC----------CCS--------------------CTTSCBCSCCEEETTT--TEEEECBSSCCEEEECCSSCCEEECC
T ss_pred eee----------ccc--------------------ccccccceeecccccC--cEEEEecCCCEEEEeecCCceEEEee
Confidence 000 000 0000111111112221 12233445555555444444444433
Q ss_pred ccccee----cC-CCCeE-EEEEcCCCcEEEEEecC---------CeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeE
Q 002405 248 IKIDKE----LG-SGDAV-CASIAPEQQILAVGTRR---------GVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSC 312 (927)
Q Consensus 248 ~~~~~~----~~-h~~~v-~v~~sp~~~~la~g~~D---------g~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~ 312 (927)
...... .+ ..... .++++|++..+.+...+ ..|.+||..+ ++.+.++.. .+.+.+
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t-~~~~~~~~~---------~~~~~~ 318 (368)
T d1mdah_ 249 IDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISN---------GHDSDA 318 (368)
T ss_dssp CCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEE---------EEEECE
T ss_pred cccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCC-CcEeEEecC---------CCceeE
Confidence 221110 00 01112 57889998877665433 3588999987 666655543 456889
Q ss_pred EEECCCCCE--EEEEEcCCcEEEEEccCCeeEEEecc
Q 002405 313 IAWTPDNSA--FAVGWKSRGLTVWSVSGCRLMSTIRQ 347 (927)
Q Consensus 313 l~~spdg~~--Lasg~~Dg~v~vW~~~~~~~~~~l~~ 347 (927)
++|||||+. +++++.|++|+|||..+++.+.+++-
T Consensus 319 ~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~ 355 (368)
T d1mdah_ 319 IIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred EEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEEC
Confidence 999999973 46677789999999999999888874
No 48
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=98.98 E-value=5e-08 Score=109.41 Aligned_cols=107 Identities=7% Similarity=0.021 Sum_probs=66.0
Q ss_pred EEEEecCeEEEEEccCeEEEeecCCceeEEEEEeeChHhhhhc-ccccEEEEcCCccEEEEEec---------CcEEEEE
Q 002405 25 IYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQRE-GENLQAVWSPDTKLIAVVTS---------SLYLHIF 94 (927)
Q Consensus 25 v~fs~dg~lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~-G~~~~v~wspDg~~Lav~t~---------dg~l~i~ 94 (927)
+..++|++++. ..++.+.+|+.. .+.....+.. ..+..+ ..+.++.|||||++|+.++. ++.+.+|
T Consensus 22 ~~W~~d~~~~~-~~~~~~~~~~~~-t~~~~~~~~~--~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~ 97 (470)
T d2bgra1 22 LRWISDHEYLY-KQENNILVFNAE-YGNSSVFLEN--STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (470)
T ss_dssp CEECSSSEEEE-ESSSCEEEEETT-TCCEEEEECT--TTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CEeCCCCEEEE-EcCCcEEEEECC-CCCEEEEEch--hhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence 66888998765 467889999996 5443332222 233443 45679999999999998853 4667788
Q ss_pred EEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEecCCcEEEEe
Q 002405 95 KVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSIS 158 (927)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~dg~i~~~~ 158 (927)
|++.+... ....+. .......+++|++.++.. .++.+.++.
T Consensus 98 d~~~~~~~-~l~~~~---------------------~~~~~~~~SPDG~~ia~~-~~~~l~~~~ 138 (470)
T d2bgra1 98 DLNKRQLI-TEERIP---------------------NNTQWVTWSPVGHKLAYV-WNNDIYVKI 138 (470)
T ss_dssp ETTTTEEC-CSSCCC---------------------TTEEEEEECSSTTCEEEE-ETTEEEEES
T ss_pred ECCCCccc-ccccCC---------------------ccccccccccCcceeeEe-ecccceEEE
Confidence 87643211 111111 111223678888887774 456666543
No 49
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.89 E-value=1.2e-08 Score=110.42 Aligned_cols=119 Identities=14% Similarity=-0.056 Sum_probs=76.9
Q ss_pred EeCCcEEEE---eeecCc--cceeeeccccee---cCCCCeEEEEEcCCCcEEEEEe----------cCCeEEEEeccCC
Q 002405 227 YSNGQLMSC---SVSKKG--LKLAEFIKIDKE---LGSGDAVCASIAPEQQILAVGT----------RRGVVELYDLAES 288 (927)
Q Consensus 227 s~dG~~~~~---~~~d~~--~~~w~~~~~~~~---~~h~~~v~v~~sp~~~~la~g~----------~Dg~V~vwd~~~~ 288 (927)
.+||+.... ...+++ +.++|..+++.. .++... .++|+|||+.|++.+ .|++|++||..+
T Consensus 28 ~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~-~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t- 105 (368)
T d1mdah_ 28 GAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT- 105 (368)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT-
T ss_pred CCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC-cceECCCCCEEEEEcccCccccccccCCeEEEEECCC-
Confidence 466664322 233444 334465555433 223333 588999999998864 478899999987
Q ss_pred CcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEE-cCCcEEEEEccCCeeEEEeccc
Q 002405 289 ASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGW-KSRGLTVWSVSGCRLMSTIRQI 348 (927)
Q Consensus 289 ~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~-~Dg~v~vW~~~~~~~~~~l~~~ 348 (927)
++.+..+........ ........++|||||++|+++. .++.+.+||+.+++....+..+
T Consensus 106 ~~~~~~i~~p~~~~~-~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~ 165 (368)
T d1mdah_ 106 FLPIADIELPDAPRF-SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA 165 (368)
T ss_dssp CCEEEEEEETTSCSC-CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECS
T ss_pred CcEeeeecCCcccee-cccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeecc
Confidence 777766654211000 0111234689999999998886 4699999999999888776543
No 50
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=98.79 E-value=1.3e-07 Score=105.97 Aligned_cols=107 Identities=14% Similarity=0.194 Sum_probs=80.3
Q ss_pred EeCCcEEEEeeecCccceeeeccccee--------cCCCCeE-EEEEcCCCcEEEEEec---------CCeEEEEeccCC
Q 002405 227 YSNGQLMSCSVSKKGLKLAEFIKIDKE--------LGSGDAV-CASIAPEQQILAVGTR---------RGVVELYDLAES 288 (927)
Q Consensus 227 s~dG~~~~~~~~d~~~~~w~~~~~~~~--------~~h~~~v-~v~~sp~~~~la~g~~---------Dg~V~vwd~~~~ 288 (927)
.+||+++. .+++++.+|+..+++.. .+|...+ +++|||||++||+++. ++.+.+||+.+
T Consensus 25 ~~d~~~~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~- 101 (470)
T d2bgra1 25 ISDHEYLY--KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK- 101 (470)
T ss_dssp CSSSEEEE--ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-
T ss_pred CCCCEEEE--EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCC-
Confidence 46676554 34666777877665432 4566778 9999999999999854 57788999986
Q ss_pred CcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEec
Q 002405 289 ASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR 346 (927)
Q Consensus 289 ~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~ 346 (927)
+. ...+.. |.+.+..++|||||+.+|... |+.+.+|+..++.......
T Consensus 102 ~~-~~~l~~--------~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~ 149 (470)
T d2bgra1 102 RQ-LITEER--------IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW 149 (470)
T ss_dssp TE-ECCSSC--------CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS
T ss_pred Cc-cccccc--------CCccccccccccCcceeeEee-cccceEEECCCCceeeeee
Confidence 43 333444 788899999999999999965 5799999998887655443
No 51
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=98.66 E-value=3.6e-05 Score=82.27 Aligned_cols=76 Identities=9% Similarity=-0.008 Sum_probs=51.7
Q ss_pred EEEEcCCCcEEEEEec-CCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEE-cCCcEEEEEccC
Q 002405 261 CASIAPEQQILAVGTR-RGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGW-KSRGLTVWSVSG 338 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~-Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~-~Dg~v~vW~~~~ 338 (927)
+++|+|+|++++++.. ...|.+|+.+..+.....-.... .........++|+|||+++.+.. .+++|.+|++.+
T Consensus 149 ~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~----~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~ 224 (365)
T d1jofa_ 149 GMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDA----PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC----SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceee----cCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC
Confidence 8999999998777654 45888998765333322111111 01234568999999999886655 568999999866
Q ss_pred Ce
Q 002405 339 CR 340 (927)
Q Consensus 339 ~~ 340 (927)
+.
T Consensus 225 ~~ 226 (365)
T d1jofa_ 225 AT 226 (365)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 52
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=98.54 E-value=2.1e-07 Score=101.08 Aligned_cols=65 Identities=15% Similarity=0.203 Sum_probs=43.7
Q ss_pred EEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEE-EEEcCCcEEEEEccC
Q 002405 263 SIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFA-VGWKSRGLTVWSVSG 338 (927)
Q Consensus 263 ~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~La-sg~~Dg~v~vW~~~~ 338 (927)
+++|+|+++.++ .++.+.+++... ...+..+.. ..+ ...+++||||++++ ++..|++|.|||+..
T Consensus 224 ~~~~dGk~~~v~-~~~v~vvd~~~~-~~v~~~IPv--------gks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k 289 (441)
T d1qnia2 224 AAVKAGNFKTIG-DSKVPVVDGRGE-SEFTRYIPV--------PKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289 (441)
T ss_dssp HHHHTTCCBCCT-TCCCCEEECSSS-CSSEEEECC--------BSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred EEecCCCEEEeC-CCCcEEEEcccC-CceEEEEeC--------CCC-ccCceECCCCCEEEEeCCcCCcEEEEEeeh
Confidence 455666665553 356666666554 455555554 333 36689999999775 567789999999865
No 53
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=98.31 E-value=4.6e-05 Score=81.44 Aligned_cols=264 Identities=8% Similarity=-0.030 Sum_probs=129.6
Q ss_pred eEEEEEecCeEEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEec---CcEEEEEEEEec
Q 002405 23 QIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTS---SLYLHIFKVQIT 99 (927)
Q Consensus 23 ~iv~fs~dg~lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~---dg~l~i~~l~~~ 99 (927)
+-++|+|||++|.++..+.+..|..+.....+...... .-+....+.++||++.+.+.+. .+.+..+.+...
T Consensus 43 s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~ 117 (365)
T d1jofa_ 43 SWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP-----IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp SEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE-----CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeec-----CCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence 45899999998887777788888775222222221111 1133457899999996655442 344544443211
Q ss_pred Ccee-ecCCCCCCCccceeeeEEeecccccccccceEEEeeccCCeEEEEec-CCcEEEEecCCccccceeecccCCCCc
Q 002405 100 EKSI-QIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLS-DGSLYSISWKGEFYGAFELVHSSNDSS 177 (927)
Q Consensus 100 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~l~v~~~-dg~i~~~~w~~~~~~~~~~~~~~~~~~ 177 (927)
.... ....... ..+.......... ......-..+.+++++++++.. ...|.++.++........ .
T Consensus 118 ~~~~~~~~~~~~--~~~~~~~~~~~~q---~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~-~------- 184 (365)
T d1jofa_ 118 AGYGNVFSVSET--GKLEKNVQNYEYQ---ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELV-G------- 184 (365)
T ss_dssp CCEEEEEEECTT--CCEEEEEEEEECC---TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE-E-------
T ss_pred CCcceeEeeeec--ceecCcccCcccC---CCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeec-c-------
Confidence 1110 0000000 0011100011100 0101112356788888887754 446766665532211110 0
Q ss_pred ccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEEEEeCCcEEEEee-ecCccceeeecccce----
Q 002405 178 VAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSV-SKKGLKLAEFIKIDK---- 252 (927)
Q Consensus 178 ~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~s~dG~~~~~~~-~d~~~~~w~~~~~~~---- 252 (927)
...........+.+.| +|||+++.+.. .+.++.+++......
T Consensus 185 -----------------------~~~~~~~g~gPr~i~f----------~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~ 231 (365)
T d1jofa_ 185 -----------------------SVDAPDPGDHPRWVAM----------HPTGNYLYALMEAGNRICEYVIDPATHMPVY 231 (365)
T ss_dssp -----------------------EEECSSTTCCEEEEEE----------CTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred -----------------------ceeecCCCCceEEEEE----------CCCCceEEEeccCCCEEEEEEecCCCceEEE
Confidence 0001112334555555 45555333222 233344443321100
Q ss_pred -------e-----------cCCCCeE-EEEEcCCCcEEEEEec------CCeEEEEeccCCCcceEEEeeecCCCCCCCC
Q 002405 253 -------E-----------LGSGDAV-CASIAPEQQILAVGTR------RGVVELYDLAESASLIRTVSLYDWGYSMDDT 307 (927)
Q Consensus 253 -------~-----------~~h~~~v-~v~~sp~~~~la~g~~------Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~ 307 (927)
. ..+.... .+.++|+|++|.++.. .+.|..|++...+........... ....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~---~~~G 308 (365)
T d1jofa_ 232 THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT---PTSG 308 (365)
T ss_dssp EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC---SSCC
T ss_pred EeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEE---EcCC
Confidence 0 1112233 7899999999887643 234888888763332222211110 0022
Q ss_pred CCeeEEEECC-CCCEEEEEE-cCCcEEEEEccCCe
Q 002405 308 GPVSCIAWTP-DNSAFAVGW-KSRGLTVWSVSGCR 340 (927)
Q Consensus 308 ~~V~~l~~sp-dg~~Lasg~-~Dg~v~vW~~~~~~ 340 (927)
+.-..++++| ||++|+++. .+++|.||++.+..
T Consensus 309 ~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~ 343 (365)
T d1jofa_ 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred CCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence 3457799998 899887775 56899999986654
No 54
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=98.28 E-value=1.9e-06 Score=93.39 Aligned_cols=228 Identities=8% Similarity=-0.053 Sum_probs=134.9
Q ss_pred EEeCCcEEEEee-ecCccceeeeccccee----cCCCCeE-EEEEcCCCc--EEEEEecCCe-----------------E
Q 002405 226 LYSNGQLMSCSV-SKKGLKLAEFIKIDKE----LGSGDAV-CASIAPEQQ--ILAVGTRRGV-----------------V 280 (927)
Q Consensus 226 ~s~dG~~~~~~~-~d~~~~~w~~~~~~~~----~~h~~~v-~v~~sp~~~--~la~g~~Dg~-----------------V 280 (927)
++|||++++++. .+..+.++|..+.+.. ..+.... .++|+|+++ +++.++++.. +
T Consensus 79 gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~ 158 (441)
T d1qnia2 79 GRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMF 158 (441)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEE
T ss_pred ccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceE
Confidence 479999876554 5667888887765432 3455667 899999998 5555554432 2
Q ss_pred EEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCC-cEEEEEccCCeeEEEeccccccceecceec
Q 002405 281 ELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSR-GLTVWSVSGCRLMSTIRQISLSSISSPIVK 359 (927)
Q Consensus 281 ~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg-~v~vW~~~~~~~~~~l~~~~~~~v~s~~~s 359 (927)
..+|..+ .+....+.. .+....++|+|||+++++++.+. .+..++..+......+... ..-..+.+.
T Consensus 159 ~~iD~~t-~~v~~qI~v---------~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~--n~p~~~~~~ 226 (441)
T d1qnia2 159 TAIDAET-MDVAWQVIV---------DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF--NVERIAAAV 226 (441)
T ss_dssp EEEETTT-CSEEEEEEE---------SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEE--EHHHHHHHH
T ss_pred EeecCcc-ceeeEEEec---------CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeC--CccceEEEe
Confidence 3355544 333334433 24467899999999999888763 3444444444333222211 122334566
Q ss_pred CCCCCCccccccc--ceeEEEcCCCceEEEEEcCCcceE-EEEec-ccee-eecccCCCeeeeeeeecCCeEEEeecCCC
Q 002405 360 PNQDCKYEPLMSG--TSMMQWDEYGYRLYAIEEGSSERV-LIFSF-GKCC-LNRGVSGMTYARQVIYGEDRLLVVQSEDT 434 (927)
Q Consensus 360 p~~~~~~~~l~sg--~~~~~W~~~~~~l~~~~~~~~~~v-~~~~~-~~~~-~s~s~d~~~~~w~~~~~~~~~~~~~~~~~ 434 (927)
|++ .....+ ....++.....+++.....+...- +.+++ |+++ +++..++++.+|++.+..+. ..+.-
T Consensus 227 ~dG----k~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~---~~~~~- 298 (441)
T d1qnia2 227 KAG----NFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDL---FEDKI- 298 (441)
T ss_dssp HTT----CCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHH---TTTSS-
T ss_pred cCC----CEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhH---hhccC-
Confidence 777 333322 256667666666655554433322 67777 8865 67889999999997643210 00000
Q ss_pred CcceEEEeecCcccccC---CCceEEEEEccCCCEEEEEeCCceE-EEEcc
Q 002405 435 DELKILHLNLPVSYISQ---NWPVQHVAASKDGMFLAVAGLHGLI-LYDIR 481 (927)
Q Consensus 435 ~~~~w~~~~~~~~~~~~---~~~I~~va~spdG~~la~ag~dg~i-~wd~~ 481 (927)
+ ......++ .--....+|+++|....+.+-|..+ .|++.
T Consensus 299 -~-------~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 299 -E-------LRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp -C-------GGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred -C-------cceEEEeecccccCcccceecCCceEEEcccccceEEEeccc
Confidence 0 00000011 1113456899999999999999999 99984
No 55
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.25 E-value=0.00012 Score=73.96 Aligned_cols=62 Identities=21% Similarity=0.240 Sum_probs=43.7
Q ss_pred CCeE-EEEEcCCCcEEEEEecCC---eEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC
Q 002405 257 GDAV-CASIAPEQQILAVGTRRG---VVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS 328 (927)
Q Consensus 257 ~~~v-~v~~sp~~~~la~g~~Dg---~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D 328 (927)
...+ .-+|||||+.||...... .+.+.+.. +.....+.. +.+......|||||+.++.....
T Consensus 38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~--~~~~~~~~~--------~~~~~~~~~~spdg~~i~~~~~~ 103 (269)
T d2hqsa1 38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA--NGAVRQVAS--------FPRHNGAPAFSPDGSKLAFALSK 103 (269)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--TCCEEEEEC--------CSSCEEEEEECTTSSEEEEEECT
T ss_pred CCceeeeEECCCCCEEEEEEeeccCcceeeeecc--cCceeEEee--------eecccccceecCCCCeeeEeeec
Confidence 3445 889999999999765443 34444443 334444554 77888999999999988876643
No 56
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.24 E-value=5.3e-05 Score=76.65 Aligned_cols=94 Identities=12% Similarity=0.096 Sum_probs=60.3
Q ss_pred CCCeE-EEEEcCCCcEEEEEecCC-eEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC---Cc
Q 002405 256 SGDAV-CASIAPEQQILAVGTRRG-VVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS---RG 330 (927)
Q Consensus 256 h~~~v-~v~~sp~~~~la~g~~Dg-~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D---g~ 330 (927)
+.... ...++|+++.++..+.++ ...+|..+..+...+ ... +.+......|||||+.||-.+.. ..
T Consensus 169 ~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~--------~~~~~~~p~~SPDG~~i~f~s~~~~~~~ 239 (269)
T d2hqsa1 169 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS--------STFLDETPSLAPNGTMVIYSSSQGMGSV 239 (269)
T ss_dssp SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECC--------CSSSCEEEEECTTSSEEEEEEEETTEEE
T ss_pred ccccccccccccccceeEEEeecCCceeeeEeecccccce-Eee--------cCccccceEECCCCCEEEEEEcCCCCcE
Confidence 34444 789999999988776654 555555544233332 223 46677888999999988765543 35
Q ss_pred EEEEEccCCeeEEEeccccccceecceecC
Q 002405 331 LTVWSVSGCRLMSTIRQISLSSISSPIVKP 360 (927)
Q Consensus 331 v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp 360 (927)
+.++++.++... .+... ...+..++|||
T Consensus 240 l~~~~~dg~~~~-~lt~~-~g~~~~p~WSP 267 (269)
T d2hqsa1 240 LNLVSTDGRFKA-RLPAT-DGQVKFPAWSP 267 (269)
T ss_dssp EEEEETTSCCEE-ECCCS-SSEEEEEEECC
T ss_pred EEEEECCCCCEE-EEeCC-CCcEEeEEeCC
Confidence 778898887543 34333 34566667766
No 57
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=98.12 E-value=0.00013 Score=75.55 Aligned_cols=112 Identities=10% Similarity=0.023 Sum_probs=80.7
Q ss_pred EEEEeCCcEEEEeeecCccceeeecccce-ecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCC
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDK-ELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWG 301 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~-~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~ 301 (927)
++++|||+++++...++++..++...... ........ +++|+|+|++++++..++.+..++..........+...
T Consensus 33 iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~--- 109 (302)
T d2p4oa1 33 LASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL--- 109 (302)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC---
T ss_pred EEECCCCCEEEEeCCCCEEEEEeCCCCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeecccc---
Confidence 56789999999888888777665332211 12334556 99999999999999999999888876522233333221
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCee
Q 002405 302 YSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRL 341 (927)
Q Consensus 302 ~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~ 341 (927)
...+..+.+++.+||+++++.+.++.+..++..++..
T Consensus 110 ---~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~ 146 (302)
T d2p4oa1 110 ---PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 146 (302)
T ss_dssp ---TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ---CCccccceeEEccCCCEEeeccccccceeeeccCCcc
Confidence 1345689999999999999888888888888877643
No 58
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=98.06 E-value=0.00017 Score=74.57 Aligned_cols=66 Identities=8% Similarity=0.007 Sum_probs=46.8
Q ss_pred EEEEEecCeEEEEEc-cCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEecCcEEEEEEEEe
Q 002405 24 IIYFKVNNGLLLIAS-PCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQI 98 (927)
Q Consensus 24 iv~fs~dg~lla~~~-~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t~dg~l~i~~l~~ 98 (927)
-++++|||+++++.. +++|.-|+.+. ....+.. ..+...+++|+|||+.+++...++.+..++...
T Consensus 32 ~iAv~pdG~l~vt~~~~~~I~~i~p~g---~~~~~~~------~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~ 98 (302)
T d2p4oa1 32 NLASAPDGTIFVTNHEVGEIVSITPDG---NQQIHAT------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK 98 (302)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTC---CEEEEEE------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CEEECCCCCEEEEeCCCCEEEEEeCCC---CEEEEEc------CCCCcceEEEcCCCCeEEEecCCceEEEEEecc
Confidence 378999999988874 66676666542 1222221 124557899999999988888888888887764
No 59
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=97.90 E-value=0.0018 Score=67.03 Aligned_cols=67 Identities=7% Similarity=0.103 Sum_probs=50.9
Q ss_pred EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEE-EEcCCcEEEEEc
Q 002405 261 CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAV-GWKSRGLTVWSV 336 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Las-g~~Dg~v~vW~~ 336 (927)
.+++.++|++.++....+.|.+||-+. +.....+.. .....++++|.||++.|.+ .+.+|.|.-.++
T Consensus 230 GiavD~~GnlyVa~~~~g~I~~~dp~~-g~~~~~i~~--------p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~ 297 (314)
T d1pjxa_ 230 GMDFDEDNNLLVANWGSSHIEVFGPDG-GQPKMRIRC--------PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTTC-BSCSEEEEC--------SSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred eeEEecCCcEEEEEcCCCEEEEEeCCC-CEEEEEEEC--------CCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence 789999999988888889999999775 555555655 4566899999999986544 445566655555
No 60
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.83 E-value=0.00031 Score=70.73 Aligned_cols=114 Identities=7% Similarity=0.050 Sum_probs=69.1
Q ss_pred CCeEEEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEc
Q 002405 257 GDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSV 336 (927)
Q Consensus 257 ~~~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~ 336 (927)
..+..+++++++.+.++...++.+++++-.+ ...+ ... .......++++.++|+..++-..+..+..++.
T Consensus 57 ~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~-~~~~--~~~-------~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~ 126 (260)
T d1rwia_ 57 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSN-NQTV--LPF-------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA 126 (260)
T ss_dssp CSCCCEEECTTCCEEEEETTTEEEEECTTCS-CCEE--CCC-------CSCCSEEEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred cCceEEEEcCCCCEEEeeeeeceeeeeeecc-ceee--eee-------eeeeecccccccccceeEeecccccccccccc
Confidence 3445789999999988888877777765433 2221 111 02345689999999998887766677777777
Q ss_pred cCCeeEEEeccccccceecceecCCCCCCcccccccc---eeEEEcCCCceE
Q 002405 337 SGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGT---SMMQWDEYGYRL 385 (927)
Q Consensus 337 ~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l~sg~---~~~~W~~~~~~l 385 (927)
.+..... ....+......++++|++ ..+++.. .+..++.++...
T Consensus 127 ~~~~~~~-~~~~~~~~p~~i~~~~~g----~~~v~~~~~~~i~~~d~~~~~~ 173 (260)
T d1rwia_ 127 GSKTQTV-LPFTGLNDPDGVAVDNSG----NVYVTDTDNNRVVKLEAESNNQ 173 (260)
T ss_dssp TCSSCEE-CCCCSCCSCCEEEECTTC----CEEEEEGGGTEEEEECTTTCCE
T ss_pred ccceeee-eeecccCCcceeeecCCC----CEeeecccccccccccccccee
Confidence 5543222 211223445667777766 4433221 566666665443
No 61
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.83 E-value=0.009 Score=65.14 Aligned_cols=71 Identities=10% Similarity=0.167 Sum_probs=44.7
Q ss_pred EEEecCeEEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEe---------cCcEEEEEEE
Q 002405 26 YFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVT---------SSLYLHIFKV 96 (927)
Q Consensus 26 ~fs~dg~lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t---------~dg~l~i~~l 96 (927)
..++|+.++-.-.++.+.+|++. .+....... ...+... .+....|||||+.++.++ ..+.+.+||+
T Consensus 23 ~W~~~~~~~~~~~~g~i~~~~~~-~~~~~~l~~--~~~~~~~-~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~ 98 (465)
T d1xfda1 23 KWISDTEFIYREQKGTVRLWNVE-TNTSTVLIE--GKKIESL-RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (465)
T ss_dssp CBSSSSCBCCCCSSSCEEEBCGG-GCCCEEEEC--TTTTTTT-TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred EEeCCCcEEEEeCCCcEEEEECC-CCCEEEEEc--Ccccccc-ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEc
Confidence 45677776655567789999985 333221121 2223222 345788999999988875 3467888888
Q ss_pred EecC
Q 002405 97 QITE 100 (927)
Q Consensus 97 ~~~~ 100 (927)
..+.
T Consensus 99 ~~~~ 102 (465)
T d1xfda1 99 PHGD 102 (465)
T ss_dssp SSCC
T ss_pred cCCc
Confidence 7544
No 62
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.74 E-value=0.0044 Score=62.56 Aligned_cols=105 Identities=12% Similarity=0.111 Sum_probs=67.0
Q ss_pred EEEeCCcEEEEeeecCccceeeecccce--e--cCCCC-eEEEEEcCCCcEEEEEec-CCeEEEEeccCCCcceEEEeee
Q 002405 225 VLYSNGQLMSCSVSKKGLKLAEFIKIDK--E--LGSGD-AVCASIAPEQQILAVGTR-RGVVELYDLAESASLIRTVSLY 298 (927)
Q Consensus 225 ~~s~dG~~~~~~~~d~~~~~w~~~~~~~--~--~~h~~-~v~v~~sp~~~~la~g~~-Dg~V~vwd~~~~~~~~~~l~~~ 298 (927)
++.++|.++++....+.+..++...... + .+... +..+++.|+|+++++-+. ++.|.+|+.+ ++.+.++...
T Consensus 163 ~~d~~g~i~v~d~~~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~--G~~~~~~~~~ 240 (279)
T d1q7fa_ 163 VVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--GQLISALESK 240 (279)
T ss_dssp EECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--SCEEEEEEES
T ss_pred eeccceeEEeeeccccceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC--CCEEEEEeCC
Confidence 3456666666555555555554321100 1 23333 458999999998877543 5579999853 6777766542
Q ss_pred cCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccC
Q 002405 299 DWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSG 338 (927)
Q Consensus 299 ~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~ 338 (927)
. ..+....|++.|||++++ +..++.|++|....
T Consensus 241 ~------~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 241 V------KHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQ 273 (279)
T ss_dssp S------CCSCEEEEEEETTTEEEE-EETTTEEEEEECSC
T ss_pred C------CCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeee
Confidence 1 233568899999997554 56789999998754
No 63
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=97.67 E-value=0.0041 Score=62.20 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=59.3
Q ss_pred EEeC--CcEEEEeeecCccceeeecccc--eecCCCCeE-EEEEcCCCcEEEEEec-CC-----eEEEEeccCCCcceEE
Q 002405 226 LYSN--GQLMSCSVSKKGLKLAEFIKID--KELGSGDAV-CASIAPEQQILAVGTR-RG-----VVELYDLAESASLIRT 294 (927)
Q Consensus 226 ~s~d--G~~~~~~~~d~~~~~w~~~~~~--~~~~h~~~v-~v~~sp~~~~la~g~~-Dg-----~V~vwd~~~~~~~~~~ 294 (927)
.+|| |+.++..+. +.+.+.+...++ .+..+.... ..+|||||+.||..+. ++ .|.+++... + ....
T Consensus 6 ~sPdi~G~~v~f~~~-~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~-g-~~~~ 82 (281)
T d1k32a2 6 LNPDIHGDRIIFVCC-DDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN-G-EIKR 82 (281)
T ss_dssp EEEEEETTEEEEEET-TEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT-T-EEEE
T ss_pred cCCCCCCCEEEEEeC-CcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecC-C-ceEE
Confidence 3577 776665543 233333444332 233445555 8899999999996543 22 345555543 3 3332
Q ss_pred EeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC------CcEEEEEccCCee
Q 002405 295 VSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS------RGLTVWSVSGCRL 341 (927)
Q Consensus 295 l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D------g~v~vW~~~~~~~ 341 (927)
+..... ............+|+|||+.|+..... ..+...+..++..
T Consensus 83 lt~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (281)
T d1k32a2 83 ITYFSG-KSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINF 134 (281)
T ss_dssp CCCCCE-EEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEE
T ss_pred eeecCC-CccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCcee
Confidence 221000 000122345788999999999875432 1244555555543
No 64
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.60 E-value=0.0081 Score=60.53 Aligned_cols=79 Identities=14% Similarity=0.236 Sum_probs=57.3
Q ss_pred eEEEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEc-CCcEEEEEcc
Q 002405 259 AVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWK-SRGLTVWSVS 337 (927)
Q Consensus 259 ~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~-Dg~v~vW~~~ 337 (927)
+..+++.+++.++++....+.|++|+.+ ++.+.++.. .++......|++.|+|+.+++-+. ++.|.+++..
T Consensus 159 ~~~i~~d~~g~i~v~d~~~~~V~~~d~~--G~~~~~~g~------~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~ 230 (279)
T d1q7fa_ 159 PNGVVVNDKQEIFISDNRAHCVKVFNYE--GQYLRQIGG------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 230 (279)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEETT--CCEEEEESC------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred cceeeeccceeEEeeeccccceeeeecC--Cceeeeecc------cccccCCcccccccCCeEEEEECCCCcEEEEECCC
Confidence 3488999999999999999999999975 555555532 123445688999999997776544 4569999865
Q ss_pred CCeeEEEec
Q 002405 338 GCRLMSTIR 346 (927)
Q Consensus 338 ~~~~~~~l~ 346 (927)
+ +.+.++.
T Consensus 231 G-~~~~~~~ 238 (279)
T d1q7fa_ 231 G-QLISALE 238 (279)
T ss_dssp S-CEEEEEE
T ss_pred C-CEEEEEe
Confidence 4 5555554
No 65
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.52 E-value=0.0018 Score=64.85 Aligned_cols=104 Identities=5% Similarity=0.008 Sum_probs=64.3
Q ss_pred EEEeCCcEEEEeeecCccceeeeccccee----cCCCCeEEEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecC
Q 002405 225 VLYSNGQLMSCSVSKKGLKLAEFIKIDKE----LGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDW 300 (927)
Q Consensus 225 ~~s~dG~~~~~~~~d~~~~~w~~~~~~~~----~~h~~~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~ 300 (927)
++.++|+++++...+..+..++....... .+-..+..+++.++|++.++...++.|..++.+. .....+..
T Consensus 146 ~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~--~~~~~~~~--- 220 (260)
T d1rwia_ 146 AVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS--TTSTVLPF--- 220 (260)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTC--SCCEECCC---
T ss_pred eecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCC--CeEEEEcc---
Confidence 44567776666555555554543322111 1223445899999999999988889888887654 22222211
Q ss_pred CCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEcc
Q 002405 301 GYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVS 337 (927)
Q Consensus 301 ~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~ 337 (927)
..-.....|++++||+.+++-+.++.|+..+..
T Consensus 221 ----~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~ 253 (260)
T d1rwia_ 221 ----TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 253 (260)
T ss_dssp ----CSCCCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred ----CCCCCeEEEEEeCCCCEEEEECCCCEEEEEeCC
Confidence 022345789999999988776766766655543
No 66
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=97.45 E-value=0.0038 Score=62.42 Aligned_cols=53 Identities=13% Similarity=0.061 Sum_probs=37.4
Q ss_pred EEEec--CeEEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEe
Q 002405 26 YFKVN--NGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVT 86 (927)
Q Consensus 26 ~fs~d--g~lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t 86 (927)
..||| |+.+|-+.++.|.+.+.. .+. ...++. ..+.....+|||||+.||...
T Consensus 5 ~~sPdi~G~~v~f~~~~dl~~~d~~-~g~-~~~Lt~------~~~~~~~p~~SPDG~~iaf~~ 59 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCCDDLWEHDLK-SGS-TRKIVS------NLGVINNARFFPDGRKIAIRV 59 (281)
T ss_dssp CEEEEEETTEEEEEETTEEEEEETT-TCC-EEEEEC------SSSEEEEEEECTTSSEEEEEE
T ss_pred ccCCCCCCCEEEEEeCCcEEEEECC-CCC-EEEEec------CCCcccCEEECCCCCEEEEEE
Confidence 46899 999988887777777875 332 223322 235567899999999999754
No 67
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=97.40 E-value=0.024 Score=58.08 Aligned_cols=97 Identities=16% Similarity=0.220 Sum_probs=62.9
Q ss_pred EEEEcCCCc-----EEEEEecCCeEEEEeccCCCcceE--EEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEE
Q 002405 261 CASIAPEQQ-----ILAVGTRRGVVELYDLAESASLIR--TVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTV 333 (927)
Q Consensus 261 ~v~~sp~~~-----~la~g~~Dg~V~vwd~~~~~~~~~--~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~v 333 (927)
.++|+|++. +.++-+..+.|..|+++..+.... .+.. . ...+.+.-..+++.++|+..++.+..+.|.+
T Consensus 176 Gi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~--~--~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~ 251 (314)
T d1pjxa_ 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH--I--PGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE--C--CCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred eeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEE--c--cccccccceeeEEecCCcEEEEEcCCCEEEE
Confidence 578888764 556667788999998875332211 1111 0 1112333467999999999888888899999
Q ss_pred EEccCCeeEEEeccccccceecceecCCC
Q 002405 334 WSVSGCRLMSTIRQISLSSISSPIVKPNQ 362 (927)
Q Consensus 334 W~~~~~~~~~~l~~~~~~~v~s~~~sp~~ 362 (927)
||..++.....+... ....++++|.|++
T Consensus 252 ~dp~~g~~~~~i~~p-~~~~t~~afg~d~ 279 (314)
T d1pjxa_ 252 FGPDGGQPKMRIRCP-FEKPSNLHFKPQT 279 (314)
T ss_dssp ECTTCBSCSEEEECS-SSCEEEEEECTTS
T ss_pred EeCCCCEEEEEEECC-CCCEEEEEEeCCC
Confidence 999887766655543 2345556665554
No 68
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.24 E-value=0.02 Score=58.84 Aligned_cols=231 Identities=10% Similarity=0.073 Sum_probs=114.5
Q ss_pred EEEEeCCcEEEEeeecCccceeeeccccee---cCC-CCeEEEEEcCCCcEEEEEecC--CeEEEEeccCCCcceEEEee
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDKE---LGS-GDAVCASIAPEQQILAVGTRR--GVVELYDLAESASLIRTVSL 297 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~---~~h-~~~v~v~~sp~~~~la~g~~D--g~V~vwd~~~~~~~~~~l~~ 297 (927)
.++.++|+++++....+.+..++....+.. ... ..+..++++++|+++++...+ ....++.++..+..+.....
T Consensus 45 ~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~ 124 (319)
T d2dg1a1 45 LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE 124 (319)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred CEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeecc
Confidence 445788888777766776666654332211 222 234489999999988876543 23445544432333333322
Q ss_pred ecCCCCCCCCCCeeEEEECCCCCEEEEEEcC------CcEEEEEccCCeeEEEeccccccceecceecCCCCCCcccc-c
Q 002405 298 YDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS------RGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPL-M 370 (927)
Q Consensus 298 ~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D------g~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~~~~~~~l-~ 370 (927)
.. .-....+.+++.|+|++.++.... +.+..++..++. +..+... ...-+.++++|++ +.+ .
T Consensus 125 ~~-----~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~~-~~~pnGia~s~dg----~~lyv 193 (319)
T d2dg1a1 125 DL-----STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQN-ISVANGIALSTDE----KVLWV 193 (319)
T ss_dssp SS-----SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEE-ESSEEEEEECTTS----SEEEE
T ss_pred CC-----CcccCCcceeEEeccceeecccccccccCcceeEEEecccce-eEEEeec-cceeeeeeecccc----ceEEE
Confidence 00 012346889999999977764321 224444444432 2222111 2334567777776 322 2
Q ss_pred ccc---eeEEEcCCCc-eEEEEEcCCcceEEEEec-cc-eeeecccCCCeeeeeeeecCCeEEEeecCCCCcceEEEeec
Q 002405 371 SGT---SMMQWDEYGY-RLYAIEEGSSERVLIFSF-GK-CCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNL 444 (927)
Q Consensus 371 sg~---~~~~W~~~~~-~l~~~~~~~~~~v~~~~~-~~-~~~s~s~d~~~~~w~~~~~~~~~~~~~~~~~~~~~w~~~~~ 444 (927)
+-. .+..++.+.. ....... .. ....+ +. .---...|..-++|....+..++..+... ......+.+
T Consensus 194 ad~~~~~I~~~d~~~~g~~~~~~~---~~-~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~---G~~l~~i~~ 266 (319)
T d2dg1a1 194 TETTANRLHRIALEDDGVTIQPFG---AT-IPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR---GYPIGQILI 266 (319)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEE---EE-EEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT---SCEEEEEEC
T ss_pred ecccCCceEEEEEcCCCceecccc---ce-eeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCC---CcEEEEEeC
Confidence 211 3333332210 0000000 00 00000 00 00000112223456666666666666532 123355667
Q ss_pred CcccccCCCceEEEEEccCCCEEEEEeC
Q 002405 445 PVSYISQNWPVQHVAASKDGMFLAVAGL 472 (927)
Q Consensus 445 ~~~~~~~~~~I~~va~spdG~~la~ag~ 472 (927)
|..-.++...+.+++|.|++..+.+...
T Consensus 267 P~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 267 PGRDEGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence 8766667667889999998877766554
No 69
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.13 E-value=0.0043 Score=67.83 Aligned_cols=77 Identities=9% Similarity=0.210 Sum_probs=53.3
Q ss_pred EEEEcCCCcEEEEEec---------CCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcE
Q 002405 261 CASIAPEQQILAVGTR---------RGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGL 331 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~---------Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v 331 (927)
...||||++.++.+.. .+.+.+||+.+ +.. ..+.. .....+.+....|||||+.+|-... +.+
T Consensus 65 ~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~-~~~-~~l~~-----~~~~~~~l~~~~wSPDG~~iafv~~-~nl 136 (465)
T d1xfda1 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH-GDP-QSLDP-----PEVSNAKLQYAGWGPKGQQLIFIFE-NNI 136 (465)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS-CCC-EECCC-----TTCCSCCCSBCCBCSSTTCEEEEET-TEE
T ss_pred eeEECCCCCeEEEEEcccceeEeeccccEEEEEccC-Cce-eeccC-----ccCCccccceeeeccCCceEEEEec-ceE
Confidence 7789999999888743 56788999886 432 22221 0113445667899999999988764 678
Q ss_pred EEEEccCCeeEEEe
Q 002405 332 TVWSVSGCRLMSTI 345 (927)
Q Consensus 332 ~vW~~~~~~~~~~l 345 (927)
.+.+..++...+..
T Consensus 137 ~~~~~~~~~~~~lt 150 (465)
T d1xfda1 137 YYCAHVGKQAIRVV 150 (465)
T ss_dssp EEESSSSSCCEEEE
T ss_pred EEEecCCCceEEEe
Confidence 88888776554433
No 70
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.01 E-value=0.061 Score=54.93 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=59.5
Q ss_pred EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC----CcEEEEEc
Q 002405 261 CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS----RGLTVWSV 336 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D----g~v~vW~~ 336 (927)
.++|.++|++..+-..+|.|.-|+.+. +.....+.. ..+....++++|||+++++...+ +.+...+.
T Consensus 44 G~~~D~~G~Ly~~D~~~g~I~ri~p~g-~~~~~~~~~--------~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~ 114 (319)
T d2dg1a1 44 GLNFDRQGQLFLLDVFEGNIFKINPET-KEIKRPFVS--------HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 114 (319)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEEC--------SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred eCEECCCCCEEEEECCCCEEEEEECCC-CeEEEEEeC--------CCCCeeEEEECCCCCEEEEecCCCccceeEEEEcC
Confidence 688999999888888889888888764 333333333 45567899999999988776432 23444444
Q ss_pred cCCeeEEEecc-ccccceecceecCCC
Q 002405 337 SGCRLMSTIRQ-ISLSSISSPIVKPNQ 362 (927)
Q Consensus 337 ~~~~~~~~l~~-~~~~~v~s~~~sp~~ 362 (927)
.+......... ......+.+++.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~nd~~~d~~G 141 (319)
T d2dg1a1 115 NGDNLQDIIEDLSTAYCIDDMVFDSKG 141 (319)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTS
T ss_pred CCceeeeeccCCCcccCCcceeEEecc
Confidence 55443333322 112335566777777
No 71
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=96.79 E-value=0.091 Score=54.81 Aligned_cols=109 Identities=17% Similarity=0.047 Sum_probs=68.0
Q ss_pred EEEEeCCcEEEEeeecC-----------ccceeeeccccee------cCCCCeE-EEEEcCCCcEEEEEecC-CeEEEEe
Q 002405 224 FVLYSNGQLMSCSVSKK-----------GLKLAEFIKIDKE------LGSGDAV-CASIAPEQQILAVGTRR-GVVELYD 284 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~-----------~~~~w~~~~~~~~------~~h~~~v-~v~~sp~~~~la~g~~D-g~V~vwd 284 (927)
+++..||++++.+..+. .+.+||..+..-. ..|.... ..++.+++++++.|+.+ .++.+||
T Consensus 25 a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd 104 (387)
T d1k3ia3 25 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYD 104 (387)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEE
T ss_pred EEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEec
Confidence 44567899999887421 1346766543211 2233323 66788999999999766 5899999
Q ss_pred ccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC------CcEEEEEccCCe
Q 002405 285 LAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS------RGLTVWSVSGCR 340 (927)
Q Consensus 285 ~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D------g~v~vW~~~~~~ 340 (927)
..+ .... .+.. .+ ....-.+.+..+||+.++.|+.+ ..+.+||..+..
T Consensus 105 ~~~-~~w~-~~~~--~~----~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~ 158 (387)
T d1k3ia3 105 SSS-DSWI-PGPD--MQ----VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 158 (387)
T ss_dssp GGG-TEEE-ECCC--CS----SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred Ccc-Cccc-cccc--cc----ccccccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence 876 3221 1111 10 11222456778899999998753 358899987764
No 72
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.20 E-value=0.69 Score=45.99 Aligned_cols=128 Identities=11% Similarity=0.089 Sum_probs=75.2
Q ss_pred EEEeCCcEEEEeeecCc----cceeeecccce--e-cCCCCeEEEEEcCCCcEE-EEEecCCeEEEEeccCCCcc----e
Q 002405 225 VLYSNGQLMSCSVSKKG----LKLAEFIKIDK--E-LGSGDAVCASIAPEQQIL-AVGTRRGVVELYDLAESASL----I 292 (927)
Q Consensus 225 ~~s~dG~~~~~~~~d~~----~~~w~~~~~~~--~-~~h~~~v~v~~sp~~~~l-a~g~~Dg~V~vwd~~~~~~~----~ 292 (927)
.+.++|+++++...... -.++....++. . .+..-+-.++|+|+++.+ .+-+..+.|..|+++..... .
T Consensus 109 ~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~ 188 (295)
T d2ghsa1 109 RMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA 188 (295)
T ss_dssp EECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC
T ss_pred EECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeeecccccccccce
Confidence 34677777776543221 12232222211 1 222333478999998854 55567789999988642211 1
Q ss_pred EEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceec
Q 002405 293 RTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVK 359 (927)
Q Consensus 293 ~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~s 359 (927)
..+.. ..+..+....+++..+|++.++.+..+.|..||..+ +++..++-. ...+++++|-
T Consensus 189 ~~~~~-----~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~G-~~~~~i~lP-~~~~T~~~FG 248 (295)
T d2ghsa1 189 EVFID-----STGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG-NHIARYEVP-GKQTTCPAFI 248 (295)
T ss_dssp EEEEE-----CTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTC-CEEEEEECS-CSBEEEEEEE
T ss_pred EEEec-----cCcccccccceEEcCCCCEEeeeeCCCceEEecCCC-cEeeEecCC-CCceEEEEEe
Confidence 11111 001345568899999999998888888999999754 566666543 2346666663
No 73
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=90.00 E-value=9.2 Score=37.15 Aligned_cols=105 Identities=10% Similarity=-0.008 Sum_probs=58.4
Q ss_pred CCcEEEEeeecCccceeeeccccee-cCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCC
Q 002405 229 NGQLMSCSVSKKGLKLAEFIKIDKE-LGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDD 306 (927)
Q Consensus 229 dG~~~~~~~~d~~~~~w~~~~~~~~-~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h 306 (927)
+|+++.+....+.+..|+..+++.. ......+ ++++.++++++++ +.+ -+.++|..+ ++. ..+.... ....
T Consensus 29 ~~~l~wvDi~~~~I~r~d~~~g~~~~~~~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~t-g~~-~~l~~~~---~~~~ 101 (295)
T d2ghsa1 29 SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIA-SDD-GLFLRDTAT-GVL-TLHAELE---SDLP 101 (295)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTT-CCE-EEEECSS---TTCT
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCEEEE-EeC-ccEEeeccc-cee-eEEeeee---cCCC
Confidence 4555555445555555554443221 1112344 8899999988775 555 477888876 433 3332211 0012
Q ss_pred CCCeeEEEECCCCCEEEEEEcC----CcEEEEEccCCe
Q 002405 307 TGPVSCIAWTPDNSAFAVGWKS----RGLTVWSVSGCR 340 (927)
Q Consensus 307 ~~~V~~l~~spdg~~Lasg~~D----g~v~vW~~~~~~ 340 (927)
....+++...|+|++.++...+ +.-.+|....++
T Consensus 102 ~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~ 139 (295)
T d2ghsa1 102 GNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK 139 (295)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE
T ss_pred cccceeeEECCCCCEEEEeccccccccceeEeeecCCc
Confidence 2357899999999977765432 234455554444
No 74
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=89.81 E-value=12 Score=38.39 Aligned_cols=54 Identities=13% Similarity=0.091 Sum_probs=35.0
Q ss_pred EEEEecCeEEEEE-c---c--CeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEe
Q 002405 25 IYFKVNNGLLLIA-S---P--CHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVT 86 (927)
Q Consensus 25 v~fs~dg~lla~~-~---~--~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t 86 (927)
.++||||+++|.+ + + -++++.|+. .+..+..... ......++|++|++.|+-..
T Consensus 130 ~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~-tg~~~~~~i~-------~~~~~~~~W~~D~~~~~Y~~ 189 (430)
T d1qfma1 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVD-GAKELPDVLE-------RVKFSCMAWTHDGKGMFYNA 189 (430)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETT-TTEEEEEEEE-------EECSCCEEECTTSSEEEEEE
T ss_pred eEecCCCCEEEEEeccccCchheeEEeccC-cceecccccc-------cccccceEEcCCCCEEEEEE
Confidence 5789999998865 2 1 279999996 5544331111 01124789999999887554
No 75
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=88.68 E-value=5.7 Score=40.69 Aligned_cols=74 Identities=9% Similarity=0.233 Sum_probs=46.7
Q ss_pred EEEEecCCeEEEEeccCCCcceEEEeeec------CCCCCC------------------------C-CCCe--eEEEECC
Q 002405 271 LAVGTRRGVVELYDLAESASLIRTVSLYD------WGYSMD------------------------D-TGPV--SCIAWTP 317 (927)
Q Consensus 271 la~g~~Dg~V~vwd~~~~~~~~~~l~~~~------~~~~~~------------------------h-~~~V--~~l~~sp 317 (927)
+.+|+..|+|+||-+.. ++.++.+.... |+++.+ + .|.. -.+++..
T Consensus 16 f~SgG~sG~v~v~G~PS-mR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~Td 94 (459)
T d1fwxa2 16 FWSSGQSGEMRILGIPS-MRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 94 (459)
T ss_dssp EECCBTTCEEEEEEETT-CCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEET
T ss_pred EeeCCccceEEEEecCC-cceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccC
Confidence 66888999999999877 55555443211 111100 0 0111 2466654
Q ss_pred ---CCCEEEEEE-cCCcEEEEEccCCeeEEEe
Q 002405 318 ---DNSAFAVGW-KSRGLTVWSVSGCRLMSTI 345 (927)
Q Consensus 318 ---dg~~Lasg~-~Dg~v~vW~~~~~~~~~~l 345 (927)
||++|.+.. .+..|.+-|+...++...+
T Consensus 95 GtyDGrylFVNDkan~RVAvIdl~~fkt~kIi 126 (459)
T d1fwxa2 95 GKYDGRFLFMNDKANTRVARVRCDVMKCDAIL 126 (459)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccceeEEEEEcCCCceEEEEECcceeeeEEE
Confidence 899998877 4688999999888775533
No 76
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.30 E-value=23 Score=34.15 Aligned_cols=65 Identities=9% Similarity=0.160 Sum_probs=44.2
Q ss_pred CeEEEEEccCeEEEeecCCceeEEEEEeeChHhhhhcccccEEEEcCCccEEEEEe---cC----cEEEEEEEE
Q 002405 31 NGLLLIASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVT---SS----LYLHIFKVQ 97 (927)
Q Consensus 31 g~lla~~~~~~v~IW~~~~~~~~l~~~~r~~~sl~~~G~~~~v~wspDg~~Lav~t---~d----g~l~i~~l~ 97 (927)
.+.||.++++.|+=|+.+....+..-+.|... +. .-.+..-.-++|.+++++.+ .+ |.+.+|+++
T Consensus 113 ~~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~-L~-~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~e 184 (327)
T d1utca2 113 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSS-LA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 184 (327)
T ss_dssp SSEEEEECSSEEEEEESSSSCCCEEEEECCGG-GT-TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred CCEEEEEcCCceEEEcccCCCCchhhhhhccc-cc-CceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEec
Confidence 45789999999999999655566677777753 43 23345667788998877632 22 455667654
No 77
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=71.69 E-value=12 Score=37.48 Aligned_cols=71 Identities=10% Similarity=0.089 Sum_probs=47.4
Q ss_pred EEEcCCCcEEEEEecCC-----------eEEEEeccCCCcceE--EEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC
Q 002405 262 ASIAPEQQILAVGTRRG-----------VVELYDLAESASLIR--TVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS 328 (927)
Q Consensus 262 v~~sp~~~~la~g~~Dg-----------~V~vwd~~~~~~~~~--~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D 328 (927)
.+...+|++++.|+.+. .+.+||..+ +.-.. .... .|.......++.+||+.++.|+.+
T Consensus 25 a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t-~~w~~~~~~~~-------~~~~~~~~~~~~~~g~i~v~Gg~~ 96 (387)
T d1k3ia3 25 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST-GIVSDRTVTVT-------KHDMFCPGISMDGNGQIVVTGGND 96 (387)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT-CCBCCCEEEEC-------SCCCSSCEEEECTTSCEEEECSSS
T ss_pred EEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCC-CcEeecCCCCC-------CcccceeEEEEecCCcEEEeecCC
Confidence 44556888888888431 377899986 43221 2211 133334567899999999998766
Q ss_pred -CcEEEEEccCCe
Q 002405 329 -RGLTVWSVSGCR 340 (927)
Q Consensus 329 -g~v~vW~~~~~~ 340 (927)
..+.+||..+..
T Consensus 97 ~~~~~~yd~~~~~ 109 (387)
T d1k3ia3 97 AKKTSLYDSSSDS 109 (387)
T ss_dssp TTCEEEEEGGGTE
T ss_pred CcceeEecCccCc
Confidence 689999987764
No 78
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=68.42 E-value=78 Score=33.37 Aligned_cols=150 Identities=11% Similarity=0.093 Sum_probs=73.8
Q ss_pred cEEEEEecCCeEEEEeccCCCcceEEEeeecCC-------------------------CCC-CCCCC-eeEEEECCCCCE
Q 002405 269 QILAVGTRRGVVELYDLAESASLIRTVSLYDWG-------------------------YSM-DDTGP-VSCIAWTPDNSA 321 (927)
Q Consensus 269 ~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~-------------------------~~~-~h~~~-V~~l~~spdg~~ 321 (927)
..++.++.+|.+.++|..+ ++.+......... ..+ .+.+. -..++++|+...
T Consensus 328 ~~v~~~~k~G~l~~lDr~t-Ge~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~ 406 (573)
T d1kb0a2 328 KVILHAPKNGFFFVLDRTN-GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (573)
T ss_dssp EEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred eeeeeccccceeEEecccc-ccccccccccccccccccccccceeeeeeccccccceEEeecccCCccccccccCCCcce
Confidence 4678889999999999887 6655433221000 000 01111 123578888888
Q ss_pred EEEEEcCCcEEEEEccCCeeEEEeccccc--cceecceecCCCCCCccccccc--ceeEEEcCCCceEEEEEcCCcceE-
Q 002405 322 FAVGWKSRGLTVWSVSGCRLMSTIRQISL--SSISSPIVKPNQDCKYEPLMSG--TSMMQWDEYGYRLYAIEEGSSERV- 396 (927)
Q Consensus 322 Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~--~~v~s~~~sp~~~~~~~~l~sg--~~~~~W~~~~~~l~~~~~~~~~~v- 396 (927)
+.+...+....++.....+......+... .......+ +.+ ...... ..+..||+.+++++-.........
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~----~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~~g 481 (573)
T d1kb0a2 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF-FNA----EPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNG 481 (573)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE-ECS----SCCCSCCEEEEEEEETTTTEEEEEEEESSSCCC
T ss_pred EEeeccccceeeecccccccccCCCCccccccccccccc-ccc----CCCCCCCcccEEEeCCCCCceEeeecCCCCCCC
Confidence 87777766665555433221111010000 00000000 011 011111 267789998887765543211100
Q ss_pred EEEec-cceeeecccCCCeeeeeeeecCC
Q 002405 397 LIFSF-GKCCLNRGVSGMTYARQVIYGED 424 (927)
Q Consensus 397 ~~~~~-~~~~~s~s~d~~~~~w~~~~~~~ 424 (927)
-.+.. +..+..++.|+.++.+|..+++.
T Consensus 482 g~lstagglVF~G~~dg~l~A~Da~TGe~ 510 (573)
T d1kb0a2 482 GTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (573)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ceEEEcCCEEEEECCCCeEEEEECCCCcE
Confidence 11222 55666778888888887666554
No 79
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.70 E-value=46 Score=33.19 Aligned_cols=28 Identities=18% Similarity=0.080 Sum_probs=22.2
Q ss_pred CCceEEEEEecCeEEEEEccCeEEEeec
Q 002405 20 SSQQIIYFKVNNGLLLIASPCHIELWSS 47 (927)
Q Consensus 20 ~~~~iv~fs~dg~lla~~~~~~v~IW~~ 47 (927)
++...++.|....+||+++.+.+.|-+.
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~~l~V~~t 64 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGSKAVVGEL 64 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEH
T ss_pred cccceEEEeCCCCEEEEECCCEEEEEEH
Confidence 3567799999888888888888888764
No 80
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=61.58 E-value=86 Score=31.45 Aligned_cols=55 Identities=16% Similarity=0.280 Sum_probs=37.6
Q ss_pred EEEEcCCCcEEEEEec-C----CeEEEEeccCCCcceE-EEeeecCCCCCCCCCCeeEEEECCCCCEEEEEE
Q 002405 261 CASIAPEQQILAVGTR-R----GVVELYDLAESASLIR-TVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGW 326 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~-D----g~V~vwd~~~~~~~~~-~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~ 326 (927)
..++||+++++|.+-. + .+++++|+.+ ++.+. .+.. .....++|++|++.|.-..
T Consensus 129 ~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~t-g~~~~~~i~~----------~~~~~~~W~~D~~~~~Y~~ 189 (430)
T d1qfma1 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG-AKELPDVLER----------VKFSCMAWTHDGKGMFYNA 189 (430)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTT-TEEEEEEEEE----------ECSCCEEECTTSSEEEEEE
T ss_pred ceEecCCCCEEEEEeccccCchheeEEeccCc-ceeccccccc----------ccccceEEcCCCCEEEEEE
Confidence 6788999999995432 3 3799999998 65443 2222 1124689999999886544
No 81
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=59.67 E-value=23 Score=36.56 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=16.1
Q ss_pred CCCCCCeeEEEECCCCCEEEEEEc
Q 002405 304 MDDTGPVSCIAWTPDNSAFAVGWK 327 (927)
Q Consensus 304 ~~h~~~V~~l~~spdg~~Lasg~~ 327 (927)
..|.+ ..|+|.|||++.++.++
T Consensus 142 ~~H~g--g~l~fgpDG~LYvs~Gd 163 (450)
T d1crua_ 142 KDHQS--GRLVIGPDQKIYYTIGD 163 (450)
T ss_dssp SSCCE--EEEEECTTSCEEEEECC
T ss_pred ccccc--cceeEcCCCCEEEEecC
Confidence 34654 68999999987766654
No 82
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=57.67 E-value=1.2e+02 Score=31.82 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=39.2
Q ss_pred cEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECC---CCCEEEEEE-----cCCcEEEEEccCCe
Q 002405 269 QILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTP---DNSAFAVGW-----KSRGLTVWSVSGCR 340 (927)
Q Consensus 269 ~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~sp---dg~~Lasg~-----~Dg~v~vW~~~~~~ 340 (927)
..+..++.||.+.--|.++ ++..-.....+. +.+ ..+.-+| ++..++.++ .+|.|+-+|+.+++
T Consensus 116 ~~i~~~~~~g~l~alda~t-G~~~w~~~~~~~-----~~~--~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~ 187 (571)
T d2ad6a1 116 GQIVKKQANGHLLALDAKT-GKINWEVEVCDP-----KVG--STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp TEEEEECTTSEEEEEETTT-CCEEEEEECCCG-----GGT--CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred CeEEEEeCCCcEEeeehhh-hhhhcccccccc-----ccc--cceeecCeEeCCeEEEeeccccccccCcEEEEECCCCc
Confidence 3566778888887778877 655443332110 000 0111112 444443332 26789999999998
Q ss_pred eEEEec
Q 002405 341 LMSTIR 346 (927)
Q Consensus 341 ~~~~l~ 346 (927)
++.+..
T Consensus 188 ~~W~~~ 193 (571)
T d2ad6a1 188 LKWRAF 193 (571)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 877654
No 83
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=45.68 E-value=1.3e+02 Score=28.91 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=35.8
Q ss_pred eEEEEEcCCCcE-EEEE---ecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEE
Q 002405 259 AVCASIAPEQQI-LAVG---TRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAV 324 (927)
Q Consensus 259 ~v~v~~sp~~~~-la~g---~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Las 324 (927)
.+.+.-.++++. |++. ....+|.+|++...+..+.-..... .......++|+...||.+.+|
T Consensus 101 Gi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~----~~~~~~pNDv~~~~~g~fy~T 166 (340)
T d1v04a_ 101 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR----HKLLPSVNDIVAVGPEHFYAT 166 (340)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC----CTTCSSEEEEEEEETTEEEEE
T ss_pred ceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecC----CccccCccceEEecCCCEEEe
Confidence 344444666653 4433 2456899999876332222222111 012345789999999998888
No 84
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=39.47 E-value=38 Score=34.77 Aligned_cols=62 Identities=18% Similarity=0.152 Sum_probs=40.6
Q ss_pred CCCCeEEEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCC-CCCCCCCeeEEEECCC
Q 002405 255 GSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGY-SMDDTGPVSCIAWTPD 318 (927)
Q Consensus 255 ~h~~~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~-~~~h~~~V~~l~~spd 318 (927)
+...+.+++|.|+++++++--.+|.|++++.++ +. ...+....... ...-.+....|+|+||
T Consensus 25 ~L~~P~~la~~pdg~llVter~~G~i~~v~~~~-g~-~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPES-GS-VKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTT-CC-EEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCCceEEEEeCCCeEEEEEecCCEEEEEECCC-Cc-EeecccCCccccccCCCCceeeEEeCCC
Confidence 446677999999999998865689999988665 33 23333211111 1112466889999995
No 85
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}
Probab=36.20 E-value=1.1e+02 Score=30.86 Aligned_cols=92 Identities=7% Similarity=-0.006 Sum_probs=51.0
Q ss_pred EeCCcEEEEeee-cCccceeeeccccee----cCCCCeE-EEEE--cCCCcEEEEEecCC------------------eE
Q 002405 227 YSNGQLMSCSVS-KKGLKLAEFIKIDKE----LGSGDAV-CASI--APEQQILAVGTRRG------------------VV 280 (927)
Q Consensus 227 s~dG~~~~~~~~-d~~~~~w~~~~~~~~----~~h~~~v-~v~~--sp~~~~la~g~~Dg------------------~V 280 (927)
..||++++.... +..+-..|+...++. ....... .++. .|+-.+++.++.+. ++
T Consensus 96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~ 175 (459)
T d1fwxa2 96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 175 (459)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEE
T ss_pred ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEE
Confidence 468887776553 333444444433321 1122333 4444 45666777777643 24
Q ss_pred EEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcC
Q 002405 281 ELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKS 328 (927)
Q Consensus 281 ~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~D 328 (927)
.+.|.++ .+....... .+....++++|||+++++.+.+
T Consensus 176 t~ID~~t-m~V~~QV~V---------~g~ld~~~~s~dGK~af~TsyN 213 (459)
T d1fwxa2 176 TAVDADK-WEVAWQVLV---------SGNLDNCDADYEGKWAFSTSYN 213 (459)
T ss_dssp EEEETTT-TEEEEEEEE---------SSCCCCEEECSSSSEEEEEESC
T ss_pred EEEecCC-ceEEEEeee---------CCChhccccCCCCCEEEEEecc
Confidence 5566654 333333333 2345578999999998887764
No 86
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.98 E-value=1.6e+02 Score=26.87 Aligned_cols=217 Identities=10% Similarity=-0.042 Sum_probs=0.0
Q ss_pred ccEEEEcCCccEEEEE-ecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeecc--CCeEE
Q 002405 70 NLQAVWSPDTKLIAVV-TSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSD--NKHML 146 (927)
Q Consensus 70 ~~~v~wspDg~~Lav~-t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~~l~ 146 (927)
+.+++|.+..++|... ..++.|...++. .......+......+.+++.| ++.++
T Consensus 38 ~~~ld~D~~~~~iywsd~~~~~I~~~~l~-----------------------g~~~~~v~~~~~~~p~~iAvD~~~~~lY 94 (263)
T d1npea_ 38 IIGLAFDCVDKVVYWTDISEPSIGRASLH-----------------------GGEPTTIIRQDLGSPEGIALDHLGRTIF 94 (263)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESS-----------------------SCCCEEEECTTCCCEEEEEEETTTTEEE
T ss_pred EEEEEEEeCCCEEEEEECCCCeEEEEEcc-----------------------cCCcEEEEEeccccccEEEEeccCCeEE
Q ss_pred EEec-CCcEEEEecCCccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCcceEEE
Q 002405 147 LGLS-DGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFV 225 (927)
Q Consensus 147 v~~~-dg~i~~~~w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 225 (927)
.+-. .+.|...+.++...... ..........++.+|....+.+
T Consensus 95 ~~d~~~~~I~~~~~dg~~~~~l------------------------------------~~~~l~~p~~l~vdp~~g~ly~ 138 (263)
T d1npea_ 95 WTDSQLDRIEVAKMDGTQRRVL------------------------------------FDTGLVNPRGIVTDPVRGNLYW 138 (263)
T ss_dssp EEETTTTEEEEEETTSCSCEEE------------------------------------ECSSCSSEEEEEEETTTTEEEE
T ss_pred EeccCCCEEEEEecCCceEEEE------------------------------------ecccccCCcEEEEecccCcEEE
Q ss_pred EEeCCc---EEEEeeecCccceeeecccceecCCCCeEEEEEcCCCcEE-EEEecCCeEEEEeccCCCcceEEEeeecCC
Q 002405 226 LYSNGQ---LMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQIL-AVGTRRGVVELYDLAESASLIRTVSLYDWG 301 (927)
Q Consensus 226 ~s~dG~---~~~~~~~d~~~~~w~~~~~~~~~~h~~~v~v~~sp~~~~l-a~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~ 301 (927)
...... +.-...+.......-.... ..+..+++.+.++.| .+-...+.|...+++ +...+.+-.
T Consensus 139 t~~~~~~~~I~r~~~dG~~~~~i~~~~~------~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~--g~~~~~v~~---- 206 (263)
T d1npea_ 139 TDWNRDNPKIETSHMDGTNRRILAQDNL------GLPNGLTFDAFSSQLCWVDAGTHRAECLNPA--QPGRRKVLE---- 206 (263)
T ss_dssp EECCSSSCEEEEEETTSCCCEEEECTTC------SCEEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEEEEE----
T ss_pred eecCCCCcEEEEecCCCCCceeeeeecc------cccceEEEeecCcEEEEEeCCCCEEEEEECC--CCCeEEEEC----
Q ss_pred CCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCeeEEEeccccccceecceecCCC
Q 002405 302 YSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQ 362 (927)
Q Consensus 302 ~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~~~~~~v~s~~~sp~~ 362 (927)
....-.+|++. +++...+-+.++.|...+..+++....+..+.......++..++.
T Consensus 207 ----~~~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~~~~ 262 (263)
T d1npea_ 207 ----GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (263)
T ss_dssp ----CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred ----CCCCcEEEEEE-CCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEeCCC
No 87
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.05 E-value=44 Score=35.55 Aligned_cols=31 Identities=3% Similarity=0.025 Sum_probs=26.7
Q ss_pred CCCCEEEEEEcCCcEEEEEccCCeeEEEecc
Q 002405 317 PDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQ 347 (927)
Q Consensus 317 pdg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~ 347 (927)
..|..+++|+.||.++.+|..+|+.+.+++-
T Consensus 495 tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~ 525 (582)
T d1flga_ 495 TAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EcCCeEEEeCCCCeEEEEECCCCcEeEEEEC
Confidence 4677888899999999999999998887764
No 88
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=30.91 E-value=1.3e+02 Score=31.46 Aligned_cols=30 Identities=7% Similarity=0.049 Sum_probs=25.5
Q ss_pred CCCEEEEEEcCCcEEEEEccCCeeEEEecc
Q 002405 318 DNSAFAVGWKSRGLTVWSVSGCRLMSTIRQ 347 (927)
Q Consensus 318 dg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~ 347 (927)
.|.++++|..||.++.+|..+|+.+.+++-
T Consensus 468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l 497 (560)
T d1kv9a2 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (560)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEECCCCcEEEEECCCCcEeEEEEC
Confidence 466788899999999999999998877654
No 89
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=30.33 E-value=2.3e+02 Score=27.08 Aligned_cols=22 Identities=23% Similarity=0.222 Sum_probs=13.7
Q ss_pred CCCCC-EEEEEE---cCCcEEEEEcc
Q 002405 316 TPDNS-AFAVGW---KSRGLTVWSVS 337 (927)
Q Consensus 316 spdg~-~Lasg~---~Dg~v~vW~~~ 337 (927)
.+||+ +|++.. ...+|.+|++.
T Consensus 107 ~~dg~~~L~vvnH~~~~~~ieif~~~ 132 (340)
T d1v04a_ 107 DDDNTVYLLVVNHPGSSSTVEVFKFQ 132 (340)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEE
T ss_pred cCCCcEEEEEEeccCCCceeEEEEEe
Confidence 45676 455543 34578888874
No 90
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=29.45 E-value=56 Score=34.58 Aligned_cols=30 Identities=3% Similarity=-0.125 Sum_probs=25.0
Q ss_pred CCCEEEEEEcCCcEEEEEccCCeeEEEecc
Q 002405 318 DNSAFAVGWKSRGLTVWSVSGCRLMSTIRQ 347 (927)
Q Consensus 318 dg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~ 347 (927)
.|.++++|+.||.++.+|..+|+.+.+.+-
T Consensus 474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l 503 (571)
T d2ad6a1 474 KGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCCEEEEECCCCeEEEEECCCCcEEEEEEC
Confidence 466777899999999999999988877653
No 91
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.01 E-value=2.8e+02 Score=27.02 Aligned_cols=66 Identities=18% Similarity=0.139 Sum_probs=43.4
Q ss_pred EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEccCCe
Q 002405 261 CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCR 340 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~~~~ 340 (927)
.++|+-+ .|++. .++.+..++... -........ -..++..+.++|. .++....++.+.++++..+.
T Consensus 91 ~vafs~d--~l~v~-~~~~l~~~~~~~-l~~~~~~~~--------~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~ 156 (381)
T d1xipa_ 91 FVCFHGD--QVLVS-TRNALYSLDLEE-LSEFRTVTS--------FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS 156 (381)
T ss_dssp EEEEETT--EEEEE-ESSEEEEEESSS-TTCEEEEEE--------CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred EEEeeCC--EEEEE-eCCCEEEEEeec-ccccccccc--------ccccccceecCCc--eeEEEecCCCEEEEEeccCc
Confidence 7888755 45553 456788888765 222333232 3567888998885 45666677899999887654
No 92
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.85 E-value=44 Score=25.99 Aligned_cols=46 Identities=20% Similarity=0.231 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHhcchhHHHHhhhcccccccchHHhHhccCChHHHHHHHHhcCcHHHHhhHH
Q 002405 826 SLLEKTCNFIRNFPEYLNVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYI 887 (927)
Q Consensus 826 ~~l~~v~~~l~~~~~~l~ivv~c~RK~e~~~W~~lF~~~g~P~~lf~~cl~~~~l~~a~~yL 887 (927)
..|++|+++++++-++..- .-...|...|+ -++..||+.. .||+||
T Consensus 52 ~iL~kViey~~~h~~~~~~---~~~~~~~~efd------vd~~~l~eLi-------~AAnyL 97 (99)
T d1hv2a_ 52 HILEKAVEYLNYNLKYSGV---SEDDDEIPEFE------IPTEMSLELL-------LAADYL 97 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHH---CSSCSSCCCCC------CCHHHHHHHH-------HHHHHH
T ss_pred HHHHHHHHHHHHhhhCcCc---ccccccCCCCC------CCHHHHHHHH-------HHHhhh
Confidence 8899999999876554311 11223344442 3677888765 567776
No 93
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=24.80 E-value=2.2e+02 Score=25.02 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=34.5
Q ss_pred EEEEcCCCcEEEEEecCCeEEEEeccCCC-----cceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEE
Q 002405 261 CASIAPEQQILAVGTRRGVVELYDLAESA-----SLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAV 324 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~Dg~V~vwd~~~~~-----~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Las 324 (927)
.+-|.|+|.+-|+ ..| .+.-+.-.... ..-.++.. +|-..-.-+.|+|||++.++
T Consensus 138 ~lFFdP~G~LYaV-~~~-~l~k~~pP~~~~d~WL~~st~igr-------~~w~~~~fi~Fs~dG~L~~v 197 (235)
T d1tl2a_ 138 FLFFHPNGYLYAV-HGQ-QFYKALPPVSNQDNWLARATKIGQ-------GGWDTFKFLFFSSVGTLFGV 197 (235)
T ss_dssp EEEECTTSCEEEE-ETT-EEEEECCCSSTTCCHHHHCEEEES-------SSGGGEEEEEECTTSCEEEE
T ss_pred EEEECCCceEEEE-ECC-cEEEcCCCCCCCchhhhhhhhhcc-------CcccCceEEEECCCCcEEEE
Confidence 8899999999999 434 34444432211 01223332 15566678999999987666
No 94
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=24.73 E-value=2.2e+02 Score=25.01 Aligned_cols=64 Identities=17% Similarity=0.128 Sum_probs=38.6
Q ss_pred EEEEcCCCcEEEEEecCCeEEEEeccCCCcc----e--EEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEE
Q 002405 261 CASIAPEQQILAVGTRRGVVELYDLAESASL----I--RTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVW 334 (927)
Q Consensus 261 ~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~----~--~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW 334 (927)
-+-|.|+|-+-|+. ++ ++|.-..+... + .+.-+. ..-+.+..|-|.|+|.+-|+-+. .+.-+
T Consensus 91 flffdP~G~LyaVt--~~--~LYr~~pPtn~~q~W~g~a~~vG~------~gw~df~~lFFdP~G~LYaV~~~--~l~k~ 158 (235)
T d1tl2a_ 91 FLFFDPNGYLYAVS--KD--KLYKASPPQSDTDNWIARATEVGS------GGWSGFKFLFFHPNGYLYAVHGQ--QFYKA 158 (235)
T ss_dssp EEEECTTSCEEEEE--TT--EEEEESCCCSTTCCHHHHSEEEEC------SSGGGEEEEEECTTSCEEEEETT--EEEEE
T ss_pred EEEECCCceEEEec--Cc--ceecCCcCcccchhhhhhhhhhcc------CCcCceeEEEECCCceEEEEECC--cEEEc
Confidence 67899999998887 35 66765432110 0 011120 02245788999999998888433 35555
Q ss_pred Ec
Q 002405 335 SV 336 (927)
Q Consensus 335 ~~ 336 (927)
..
T Consensus 159 ~p 160 (235)
T d1tl2a_ 159 LP 160 (235)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 95
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=24.68 E-value=39 Score=36.02 Aligned_cols=54 Identities=19% Similarity=0.261 Sum_probs=37.6
Q ss_pred cCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCCCCCCCCCeeEEEECCCCC-EEEEEE
Q 002405 265 APEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNS-AFAVGW 326 (927)
Q Consensus 265 sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~-~Lasg~ 326 (927)
+..+.++.+|+.||.++.+|.++ ++.+-.++... ..+..+ +.|..||+ ++|+..
T Consensus 494 stagglVF~Gt~dg~l~A~Da~T-Ge~LW~~~~~~----~~~~~P---~ty~~~G~qYv~i~a 548 (582)
T d1flga_ 494 ATAGNLVFTGTGDGYFKAFDAKS-GKELWKFQTGS----GIVSPP---ITWEQDGEQYLGVTV 548 (582)
T ss_dssp EETTTEEEEECTTSEEEEEETTT-CCEEEEEECSS----CCCSCC---EEEEETTEEEEEEEE
T ss_pred EEcCCeEEEeCCCCeEEEEECCC-CcEeEEEECCC----CccccC---EEEEECCEEEEEEEe
Confidence 34677877899999999999998 88777666511 112333 67788996 555543
No 96
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.01 E-value=28 Score=27.08 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHhcchhHHHHhhhcccccccchHHhHhccCChHHHHHHHHhcCcHHHHhhHH
Q 002405 826 SLLEKTCNFIRNFPEYLNVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYI 887 (927)
Q Consensus 826 ~~l~~v~~~l~~~~~~l~ivv~c~RK~e~~~W~~lF~~~g~P~~lf~~cl~~~~l~~a~~yL 887 (927)
..|++|+++++.+-+|. ..+.|..-|+ -+|..|||.. .||+||
T Consensus 52 ~iL~kViey~~~h~~~~------~~~~~~~~fd------i~~~~l~eLi-------~AAnyL 94 (96)
T d2c9wc1 52 HVLSKVCMYFTYKVRYT------NSSTEIPEFP------IAPEIALELL-------MAANFL 94 (96)
T ss_dssp HHHHHHHHHHHHHHHTC----------CCCCCC------CCHHHHHHHH-------HHHHHH
T ss_pred HHHHHHHHHHHhhccCc------CCcCCCCCCc------CCHHHHHHHH-------HHHhhh
Confidence 78999999987554432 2355666663 2677888754 466665
No 97
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=22.14 E-value=71 Score=25.79 Aligned_cols=53 Identities=6% Similarity=-0.046 Sum_probs=44.0
Q ss_pred HHHHHHHHhcCcHHHHhhHHhhhhhccCcchhHHHHHHHHHHHHhhccHhhHH
Q 002405 868 TELFEECFQRRWYRTAACYILVIAKLEGPAVSQYSALRLLQATLDECLYELAG 920 (927)
Q Consensus 868 ~~lf~~cl~~~~l~~a~~yL~v~~~~~~~~~~~~~~~~ll~~al~~~~~~l~~ 920 (927)
.++|+++.+.|+.+-+..+=.++++=++...+.+.|+++++.|.+.++.+-|.
T Consensus 79 ~~~~~~aa~~g~~~a~~~Lg~~y~~G~gv~~d~~~A~~~~~~Aa~~G~~~A~~ 131 (133)
T d1klxa_ 79 AQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACG 131 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhhhhccCcchHHHHHHHHHHcCCccCCCHHHHHHHHHHHHHCCCHHHHH
Confidence 47899999999988888877888776665567888999999999999887654
No 98
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=21.57 E-value=83 Score=33.15 Aligned_cols=30 Identities=7% Similarity=0.010 Sum_probs=25.9
Q ss_pred CCCEEEEEEcCCcEEEEEccCCeeEEEecc
Q 002405 318 DNSAFAVGWKSRGLTVWSVSGCRLMSTIRQ 347 (927)
Q Consensus 318 dg~~Lasg~~Dg~v~vW~~~~~~~~~~l~~ 347 (927)
+|..+++|..||.++.+|..+|+.+.+++-
T Consensus 487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~ 516 (573)
T d1kb0a2 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (573)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCCEEEEECCCCeEEEEECCCCcEeEEEEC
Confidence 677888899999999999999998877653
No 99
>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}
Probab=20.98 E-value=2.8e+02 Score=24.98 Aligned_cols=104 Identities=13% Similarity=0.084 Sum_probs=47.8
Q ss_pred cEEEEEEccCcceEEEEEeCCcEEEEeeecCccceeeecccceecCCCCeEEEEEcCCCcEEEEEecCCeEEEEeccCCC
Q 002405 210 AIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESA 289 (927)
Q Consensus 210 ~i~~i~~~~~~~~~~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~~~h~~~v~v~~sp~~~~la~g~~Dg~V~vwd~~~~~ 289 (927)
.|..++- ....++++. ||+++.++.++...--. ... .....+.++--.. ..+|. .||++..|.-...+
T Consensus 27 ~i~~va~--G~~h~~al~-dG~v~~wG~N~~GQlG~--~~~----~~~~v~~v~~G~~-~~~al--~dg~v~~wG~~~~g 94 (273)
T d1jtdb_ 27 GVDAIAG--GYFHGLALK-GGKVLGWGANLNGQLTM--PAA----TQSGVDAIAAGNY-HSLAL--KDGEVIAWGGNEDG 94 (273)
T ss_dssp SEEEEEE--CSSEEEEEE-TTEEEEEECCTTSTTSC--CGG----GGSCCCEEEECSS-EEEEE--ETTEEEEEECCTTS
T ss_pred CcEEEEc--cCCEEEEEE-CCEEEEEeCCCCCceee--eec----ccccceEEecCCC-ceeee--eeeeeeccCCCcce
Confidence 3555542 333455565 89988888765421100 000 0011123433222 23333 58999999875533
Q ss_pred cceEEEeeecCCCCCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEcc
Q 002405 290 SLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVS 337 (927)
Q Consensus 290 ~~~~~l~~~~~~~~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~ 337 (927)
..... .. -...+..++-... ... +-.|+.+..|.-.
T Consensus 95 q~~~~-~~--------~~~~~~~i~~~~~-~~~--~~~dg~v~~~g~~ 130 (273)
T d1jtdb_ 95 QTTVP-AE--------ARSGVDAIAAGAW-ASY--ALKDGKVIAWGDD 130 (273)
T ss_dssp TTCCC-GG--------GGSSCCEEEEETT-EEE--EEETTEEEEEECC
T ss_pred eeccc-cc--------cccceeEEeeecc-ccc--ccccccceecccC
Confidence 32110 00 1223444443322 222 2357888888643
No 100
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.97 E-value=3.3e+02 Score=25.66 Aligned_cols=208 Identities=12% Similarity=0.058 Sum_probs=0.0
Q ss_pred CCccEEEEEecCcEEEEEEEEecCceeecCCCCCCCccceeeeEEeecccccccccceEEEeeccC-CeEEEEecCCcEE
Q 002405 77 PDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISLVLNEQLPFAEKGLSVSNIVSDN-KHMLLGLSDGSLY 155 (927)
Q Consensus 77 pDg~~Lav~t~dg~l~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~l~v~~~dg~i~ 155 (927)
||-..+++-|.+|+|+--.+..-.. ......-++..+.....+.+.. +.+++-+..|.++
T Consensus 3 ~~E~v~v~lS~~GyiKR~~~~~~~~-------------------~~~~~~~~k~~D~v~~~~~~~t~d~ll~fT~~Grvy 63 (323)
T d1wp5a_ 3 ASEDVIVTVTKDGYVKRTSLRSYAA-------------------SNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYL 63 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHH-------------------TTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEE
T ss_pred CCCCEEEEEeCCCeEEEeeHHHhhh-------------------cCCCCCcccCCceEEEEEEEcCCCEEEEEecCCEEE
Q ss_pred EE--------ecC--CccccceeecccCCCCcccccccccCCCCCccccCCCceecccccCCCccEEEEEEccCc--ceE
Q 002405 156 SI--------SWK--GEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPM--RLL 223 (927)
Q Consensus 156 ~~--------~w~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~ 223 (927)
.+ +|. +.....+ ..+......+..+...... ..+
T Consensus 64 ~l~v~eiP~~~~~s~G~pi~~l----------------------------------l~l~~~e~ii~~~~~~~~~~~~~l 109 (323)
T d1wp5a_ 64 YCPVHELPDIRWKDLGQHIANI----------------------------------IPIDRDEEIIKAIPINDFELNGYF 109 (323)
T ss_dssp EEEGGGSCBCCTTSCCEEGGGT----------------------------------SCCCTTCCEEEEEEESCTTSSCEE
T ss_pred EEeeccCcccccccccccceee----------------------------------ecccCCcceEEEeeccccccceeE
Q ss_pred EEEEeCCcEEEEeeecCccceeeecccceecCCCCeE-EEEEcCCCcEEEEEecCCeEEEEeccCCCcceEEEeeecCCC
Q 002405 224 FVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGY 302 (927)
Q Consensus 224 ~~~s~dG~~~~~~~~d~~~~~w~~~~~~~~~~h~~~v-~v~~sp~~~~la~g~~Dg~V~vwd~~~~~~~~~~l~~~~~~~ 302 (927)
+.++..|...-+...+.....-..........-.+.+ .+........++.++..|.+..++.+.-...-+.-.+...--
T Consensus 110 ~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV~~ik 189 (323)
T d1wp5a_ 110 LFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMN 189 (323)
T ss_dssp EEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCC
T ss_pred EEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEEEEecceeeEeecccccccCcccccccccc
Q ss_pred CCCCCCCeeEEEECCCCCEEEEEEcCCcEEEEEcc
Q 002405 303 SMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVS 337 (927)
Q Consensus 303 ~~~h~~~V~~l~~spdg~~Lasg~~Dg~v~vW~~~ 337 (927)
-.....-|......+++..|+..++.|..+.-++.
T Consensus 190 L~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~ 224 (323)
T d1wp5a_ 190 LKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp CCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred cccccccchhhhccccccceeeeeeeheeecccch
No 101
>d2pf1a2 g.32.1.1 (A:36-65) Prothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.27 E-value=25 Score=20.07 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=13.1
Q ss_pred ccCChHHHHHHHHhcC
Q 002405 863 AAGRSTELFEECFQRR 878 (927)
Q Consensus 863 ~~g~P~~lf~~cl~~~ 878 (927)
.+-+||+-|..|||.|
T Consensus 15 s~r~prekl~~clegn 30 (30)
T d2pf1a2 15 SARNPREKLNECLEGN 30 (30)
T ss_dssp TTCSSHHHHHHHHSTT
T ss_pred HhcCcHHHHHHHhcCC
Confidence 4568999999999864
Done!