Query 002409
Match_columns 927
No_of_seqs 686 out of 4713
Neff 7.9
Searched_HMMs 29240
Date Tue Mar 26 01:12:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002409.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002409hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.1E-49 3.7E-54 443.0 18.6 257 602-878 44-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 5E-50 1.7E-54 439.7 15.2 257 602-878 16-289 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 1.6E-50 5.6E-55 445.5 9.5 257 600-876 27-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1.1E-48 3.9E-53 429.4 18.1 254 602-876 39-298 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 8.4E-48 2.9E-52 426.6 18.3 250 602-878 61-316 (336)
6 4fih_A Serine/threonine-protei 100.0 6.3E-48 2.1E-52 428.9 15.6 248 601-872 76-324 (346)
7 3hmm_A TGF-beta receptor type- 100.0 1.4E-47 4.8E-52 422.2 16.5 266 602-878 6-297 (303)
8 4ase_A Vascular endothelial gr 100.0 8.3E-48 2.8E-52 431.3 14.4 265 596-879 61-348 (353)
9 3fpq_A Serine/threonine-protei 100.0 1E-46 3.5E-51 410.9 20.1 247 602-872 29-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 8E-48 2.7E-52 428.7 11.1 249 601-872 26-277 (350)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-47 4.1E-52 420.6 11.5 247 601-872 34-285 (311)
12 4fie_A Serine/threonine-protei 100.0 8.4E-47 2.9E-51 430.0 17.5 248 601-872 153-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.7E-46 5.7E-51 405.7 14.6 245 600-872 14-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-46 4E-51 412.5 9.2 246 601-872 26-282 (304)
15 4g31_A Eukaryotic translation 100.0 2.4E-44 8.2E-49 395.1 16.8 249 601-872 7-280 (299)
16 2qkw_B Protein kinase; three-h 100.0 1.9E-42 6.4E-47 384.3 23.4 274 602-879 42-316 (321)
17 3uim_A Brassinosteroid insensi 100.0 1.2E-42 4.1E-47 386.3 18.0 288 589-876 18-309 (326)
18 4b99_A Mitogen-activated prote 100.0 2.3E-42 7.9E-47 393.7 18.7 263 601-872 56-345 (398)
19 3uto_A Twitchin; kinase, muscl 100.0 9.9E-42 3.4E-46 406.8 17.0 250 601-872 159-411 (573)
20 4f9c_A Cell division cycle 7-r 100.0 1.7E-41 5.7E-46 382.3 17.3 194 601-806 23-250 (361)
21 3v5w_A G-protein coupled recep 100.0 5.1E-41 1.8E-45 398.8 15.9 246 602-872 192-450 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 5.6E-40 1.9E-44 362.3 18.0 256 601-879 12-283 (310)
23 3p86_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 361.7 17.0 258 600-879 38-299 (309)
24 3kul_A Ephrin type-A receptor 100.0 2.3E-40 7.8E-45 368.6 11.0 261 596-879 46-314 (325)
25 3fxz_A Serine/threonine-protei 100.0 1.5E-39 5E-44 357.3 16.6 248 601-872 22-270 (297)
26 2nru_A Interleukin-1 receptor- 100.0 1.2E-38 4E-43 350.9 23.6 281 588-877 12-305 (307)
27 2psq_A Fibroblast growth facto 100.0 1.1E-39 3.7E-44 369.9 15.2 261 600-880 82-366 (370)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.7E-40 2.6E-44 353.1 13.0 256 600-879 9-265 (268)
29 4hcu_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44 352.4 13.6 254 601-878 12-266 (269)
30 3zgw_A Maternal embryonic leuc 100.0 1.4E-39 4.7E-44 365.5 14.4 247 601-872 12-261 (347)
31 2qol_A Ephrin receptor; recept 100.0 6.5E-40 2.2E-44 372.1 11.2 257 600-879 46-310 (373)
32 2c30_A Serine/threonine-protei 100.0 8E-39 2.7E-43 355.5 19.7 260 589-872 23-295 (321)
33 3gen_A Tyrosine-protein kinase 100.0 1E-39 3.5E-44 355.0 11.8 256 600-879 25-281 (283)
34 3soc_A Activin receptor type-2 100.0 2.2E-39 7.5E-44 360.1 14.6 266 601-878 26-318 (322)
35 3ugc_A Tyrosine-protein kinase 100.0 4.6E-40 1.6E-44 360.2 8.0 265 599-878 10-291 (295)
36 3fe3_A MAP/microtubule affinit 100.0 3.8E-39 1.3E-43 359.3 14.0 245 601-872 17-265 (328)
37 4euu_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 347.9 23.0 271 601-877 11-308 (319)
38 3cbl_A C-FES, proto-oncogene t 100.0 2.3E-39 7.8E-44 368.2 12.1 255 601-878 116-374 (377)
39 4eqm_A Protein kinase; transfe 100.0 5.3E-39 1.8E-43 352.3 14.4 259 600-878 12-275 (294)
40 2ivs_A Proto-oncogene tyrosine 100.0 6.2E-39 2.1E-43 353.8 14.0 260 600-879 24-312 (314)
41 3vhe_A Vascular endothelial gr 100.0 4.8E-39 1.7E-43 362.0 13.0 263 598-879 21-356 (359)
42 1o6l_A RAC-beta serine/threoni 100.0 1.5E-38 5.3E-43 355.7 16.9 245 602-872 8-261 (337)
43 2yab_A Death-associated protei 100.0 1.3E-38 4.6E-43 359.5 16.4 249 601-872 14-273 (361)
44 2y0a_A Death-associated protei 100.0 2.2E-38 7.6E-43 352.7 17.8 251 599-872 11-272 (326)
45 3q4u_A Activin receptor type-1 100.0 1.4E-38 4.8E-43 348.8 15.9 257 601-876 10-300 (301)
46 3niz_A Rhodanese family protei 100.0 2E-38 6.9E-43 350.6 17.1 264 601-872 23-301 (311)
47 3tt0_A Basic fibroblast growth 100.0 5.2E-39 1.8E-43 365.8 12.4 262 599-880 69-354 (382)
48 3c0i_A Peripheral plasma membr 100.0 1.3E-38 4.4E-43 358.4 15.1 256 598-872 23-287 (351)
49 1mp8_A Focal adhesion kinase 1 100.0 4.4E-39 1.5E-43 350.0 10.5 257 600-880 16-278 (281)
50 1qcf_A Haematopoetic cell kina 100.0 9.5E-39 3.2E-43 372.2 13.6 254 600-877 189-443 (454)
51 3l9p_A Anaplastic lymphoma kin 100.0 5.3E-39 1.8E-43 363.8 11.1 261 600-880 72-347 (367)
52 3kfa_A Tyrosine-protein kinase 100.0 8.9E-39 3E-43 348.3 12.0 259 599-880 13-273 (288)
53 3lxl_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 358.8 8.8 265 600-880 24-305 (327)
54 3poz_A Epidermal growth factor 100.0 1.5E-38 5.3E-43 354.0 13.7 256 601-880 17-280 (327)
55 1opk_A P150, C-ABL, proto-onco 100.0 3.9E-39 1.3E-43 379.4 9.3 255 601-878 222-478 (495)
56 1tki_A Titin; serine kinase, m 100.0 2.7E-38 9.3E-43 351.4 15.2 249 601-872 7-258 (321)
57 1rjb_A FL cytokine receptor; k 100.0 2.8E-38 9.6E-43 353.8 15.3 263 599-880 45-336 (344)
58 3dtc_A Mitogen-activated prote 100.0 1.4E-38 5E-43 343.5 12.5 251 601-876 9-271 (271)
59 3lxp_A Non-receptor tyrosine-p 100.0 2.3E-38 7.7E-43 351.2 14.3 270 602-881 34-313 (318)
60 1ob3_A PFPK5, cell division co 100.0 2.8E-38 9.7E-43 345.1 14.9 263 602-872 5-281 (288)
61 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-38 4.1E-43 358.9 12.2 246 601-872 25-281 (353)
62 2izr_A Casein kinase I isoform 100.0 3.9E-38 1.3E-42 351.0 16.2 259 601-879 11-282 (330)
63 2zv2_A Calcium/calmodulin-depe 100.0 3.9E-38 1.3E-42 345.5 15.9 247 601-872 15-293 (298)
64 3qup_A Tyrosine-protein kinase 100.0 2.6E-38 9E-43 350.9 14.6 261 599-879 23-299 (323)
65 1t46_A HOMO sapiens V-KIT hard 100.0 1.8E-38 6.1E-43 350.0 13.1 260 600-878 24-307 (313)
66 1luf_A Muscle-specific tyrosin 100.0 1.3E-38 4.6E-43 355.9 12.2 259 600-878 48-335 (343)
67 3tki_A Serine/threonine-protei 100.0 2.1E-38 7E-43 352.6 13.6 250 601-872 9-262 (323)
68 1qpc_A LCK kinase; alpha beta 100.0 3.9E-38 1.3E-42 341.8 15.4 256 600-879 14-270 (279)
69 3t9t_A Tyrosine-protein kinase 100.0 1.8E-38 6.1E-43 341.7 12.5 254 601-878 10-264 (267)
70 3soa_A Calcium/calmodulin-depe 100.0 6.1E-38 2.1E-42 363.5 17.7 252 599-872 11-268 (444)
71 2bdw_A Hypothetical protein K1 100.0 5.9E-38 2E-42 354.5 17.1 252 598-872 28-285 (362)
72 1k9a_A Carboxyl-terminal SRC k 100.0 7E-38 2.4E-42 364.4 17.8 249 601-878 195-445 (450)
73 2x4f_A Myosin light chain kina 100.0 8.5E-38 2.9E-42 354.7 18.0 247 604-872 94-343 (373)
74 4e5w_A Tyrosine-protein kinase 100.0 8.2E-39 2.8E-43 351.1 9.1 264 599-877 21-301 (302)
75 2pmi_A Negative RE, cyclin-dep 100.0 9.2E-38 3.2E-42 346.2 17.6 267 600-872 6-294 (317)
76 3kex_A Receptor tyrosine-prote 100.0 2.3E-38 8E-43 352.2 12.8 256 601-880 15-278 (325)
77 1kob_A Twitchin; kinase, intra 100.0 9.2E-38 3.2E-42 355.8 17.8 251 600-872 52-305 (387)
78 4aw2_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 364.4 14.4 252 602-872 77-339 (437)
79 3qd2_B Eukaryotic translation 100.0 4.8E-38 1.7E-42 349.0 14.8 250 600-872 7-326 (332)
80 3o0g_A Cell division protein k 100.0 1.1E-37 3.7E-42 341.0 17.3 263 602-872 5-283 (292)
81 3lb7_A RAF proto-oncogene seri 100.0 2.9E-38 9.8E-43 348.8 12.3 263 595-878 32-300 (307)
82 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.2E-38 7.6E-43 368.8 12.0 254 600-877 185-439 (452)
83 3cc6_A Protein tyrosine kinase 100.0 4.8E-38 1.6E-42 341.6 13.8 259 601-883 14-278 (281)
84 3hko_A Calcium/calmodulin-depe 100.0 1E-37 3.5E-42 349.2 16.8 263 592-872 20-331 (345)
85 2i1m_A Macrophage colony-stimu 100.0 7.1E-38 2.4E-42 348.9 15.4 264 599-881 46-329 (333)
86 3p1a_A MYT1 kinase, membrane-a 100.0 7.4E-38 2.5E-42 346.0 15.4 252 592-872 50-305 (311)
87 3v8s_A RHO-associated protein 100.0 3.7E-38 1.3E-42 361.5 13.4 249 602-872 72-330 (410)
88 1fot_A TPK1 delta, CAMP-depend 100.0 6.8E-38 2.3E-42 347.6 14.9 243 601-872 8-259 (318)
89 4dc2_A Protein kinase C IOTA t 100.0 1.4E-37 4.6E-42 355.0 17.7 254 601-872 54-319 (396)
90 1csn_A Casein kinase-1; phosph 100.0 1.7E-37 5.9E-42 339.6 17.8 260 601-879 12-284 (298)
91 1u59_A Tyrosine-protein kinase 100.0 1.4E-37 4.7E-42 339.3 16.8 253 605-881 16-275 (287)
92 3kmu_A ILK, integrin-linked ki 100.0 9.3E-38 3.2E-42 336.4 15.1 249 601-877 12-269 (271)
93 2pvf_A Fibroblast growth facto 100.0 1E-37 3.5E-42 348.3 15.9 262 599-880 35-320 (334)
94 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.9E-38 1.7E-42 351.4 13.1 244 601-872 11-259 (336)
95 4f0f_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 338.6 16.6 250 601-876 21-287 (287)
96 4fvq_A Tyrosine-protein kinase 100.0 3.2E-38 1.1E-42 344.0 11.2 251 600-879 9-276 (289)
97 1xjd_A Protein kinase C, theta 100.0 3.2E-38 1.1E-42 354.2 11.2 246 601-872 19-270 (345)
98 2wqm_A Serine/threonine-protei 100.0 2.3E-37 8E-42 341.2 17.9 263 600-880 33-299 (310)
99 3kn6_A Ribosomal protein S6 ki 100.0 1E-37 3.4E-42 347.4 14.7 250 605-872 17-271 (325)
100 3a62_A Ribosomal protein S6 ki 100.0 1E-37 3.5E-42 347.5 14.7 247 600-872 18-277 (327)
101 3op5_A Serine/threonine-protei 100.0 1.2E-37 4.3E-42 352.0 15.4 266 600-879 36-330 (364)
102 4eut_A Serine/threonine-protei 100.0 2.8E-37 9.7E-42 353.3 18.5 273 601-879 11-310 (396)
103 2eva_A TAK1 kinase - TAB1 chim 100.0 1.9E-37 6.5E-42 342.1 16.4 253 601-878 10-263 (307)
104 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.1E-37 3.9E-42 350.5 14.8 243 601-872 43-294 (350)
105 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-37 7.4E-42 335.6 16.5 250 599-872 9-262 (277)
106 1mqb_A Ephrin type-A receptor 100.0 4.4E-38 1.5E-42 351.4 11.1 256 602-880 47-311 (333)
107 3mdy_A Bone morphogenetic prot 100.0 6.1E-37 2.1E-41 341.3 20.3 269 594-878 32-331 (337)
108 2xir_A Vascular endothelial gr 100.0 1.2E-37 4E-42 344.0 14.3 262 599-879 27-311 (316)
109 3uc3_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 352.4 14.1 251 600-872 21-275 (361)
110 3a8x_A Protein kinase C IOTA t 100.0 2.3E-37 7.9E-42 347.3 16.6 254 601-872 11-276 (345)
111 2i0e_A Protein kinase C-beta I 100.0 1.2E-37 4E-42 350.7 14.2 246 601-872 22-277 (353)
112 2vd5_A DMPK protein; serine/th 100.0 7.8E-38 2.7E-42 359.0 12.9 251 602-872 64-328 (412)
113 2buj_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 345.2 13.2 259 600-876 30-304 (317)
114 2a2a_A Death-associated protei 100.0 2.6E-37 8.8E-42 343.0 16.6 251 599-872 12-273 (321)
115 3g33_A Cell division protein k 100.0 1.4E-37 4.7E-42 342.8 14.3 269 595-872 5-297 (308)
116 3dbq_A Dual specificity protei 100.0 6.7E-38 2.3E-42 351.3 11.8 249 601-873 11-275 (343)
117 1b6c_B TGF-B superfamily recep 100.0 8.6E-37 2.9E-41 341.1 20.7 269 591-878 34-336 (342)
118 3lzb_A Epidermal growth factor 100.0 1.2E-37 4.2E-42 346.9 13.5 256 601-880 17-280 (327)
119 3og7_A AKAP9-BRAF fusion prote 100.0 9E-38 3.1E-42 341.3 11.8 262 595-877 20-287 (289)
120 3ll6_A Cyclin G-associated kin 100.0 8.4E-38 2.9E-42 347.8 11.8 255 600-879 29-309 (337)
121 1xbb_A Tyrosine-protein kinase 100.0 3E-37 1E-41 337.3 15.8 258 602-884 19-285 (291)
122 2w4o_A Calcium/calmodulin-depe 100.0 1.8E-37 6.1E-42 348.9 14.3 248 601-872 55-306 (349)
123 4fr4_A YANK1, serine/threonine 100.0 3.1E-37 1.1E-41 350.8 16.5 248 601-872 17-272 (384)
124 3is5_A Calcium-dependent prote 100.0 5E-37 1.7E-41 334.8 17.3 253 599-872 22-279 (285)
125 3gni_B Strad alpha; kinase fol 100.0 3E-37 1E-41 351.9 16.2 272 600-876 26-340 (389)
126 2h34_A Serine/threonine-protei 100.0 7.9E-37 2.7E-41 337.3 19.0 257 601-879 36-297 (309)
127 2h8h_A Proto-oncogene tyrosine 100.0 1.9E-38 6.4E-43 377.0 6.3 254 600-877 268-522 (535)
128 4ejn_A RAC-alpha serine/threon 100.0 9E-38 3.1E-42 363.1 11.8 246 601-872 150-405 (446)
129 4agu_A Cyclin-dependent kinase 100.0 3.2E-37 1.1E-41 340.0 15.6 263 602-872 6-285 (311)
130 3ork_A Serine/threonine protei 100.0 6.3E-38 2.2E-42 346.4 9.7 256 600-876 13-279 (311)
131 4hgt_A Casein kinase I isoform 100.0 6.7E-37 2.3E-41 334.4 17.6 262 599-879 9-281 (296)
132 3lm5_A Serine/threonine-protei 100.0 3.9E-37 1.3E-41 342.7 15.8 261 591-872 20-288 (327)
133 3f66_A Hepatocyte growth facto 100.0 3.4E-37 1.2E-41 337.7 14.9 255 601-878 27-291 (298)
134 3pls_A Macrophage-stimulating 100.0 4.4E-37 1.5E-41 336.4 15.6 254 604-879 26-288 (298)
135 3kk8_A Calcium/calmodulin depe 100.0 5.9E-37 2E-41 333.2 16.4 249 601-872 8-262 (284)
136 3c1x_A Hepatocyte growth facto 100.0 1.8E-37 6.2E-42 352.0 12.7 254 602-878 92-355 (373)
137 1fvr_A Tyrosine-protein kinase 100.0 2.2E-37 7.4E-42 344.4 13.1 256 601-878 27-300 (327)
138 2zmd_A Dual specificity protei 100.0 1.8E-37 6.1E-42 354.2 12.5 248 601-872 58-321 (390)
139 3gxj_A TGF-beta receptor type- 100.0 1.5E-38 5.1E-43 348.7 3.4 258 601-878 5-297 (303)
140 2eue_A Carbon catabolite derep 100.0 2.7E-37 9.2E-42 334.7 13.2 244 601-872 15-263 (275)
141 3g2f_A Bone morphogenetic prot 100.0 3.9E-37 1.3E-41 343.2 14.9 268 601-879 15-319 (336)
142 3bhy_A Death-associated protei 100.0 5.2E-37 1.8E-41 333.5 15.4 251 599-872 5-266 (283)
143 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-36 4.4E-41 332.3 18.6 260 601-879 11-281 (296)
144 2w1i_A JAK2; chromosomal rearr 100.0 1.2E-37 4.1E-42 346.5 10.4 264 600-878 42-322 (326)
145 1vzo_A Ribosomal protein S6 ki 100.0 1.9E-37 6.4E-42 349.5 12.0 252 601-873 56-323 (355)
146 3fdn_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 334.2 13.9 244 601-872 11-258 (279)
147 2r5t_A Serine/threonine-protei 100.0 2.2E-37 7.5E-42 351.0 12.5 242 601-868 40-286 (373)
148 2ozo_A Tyrosine-protein kinase 100.0 4.4E-37 1.5E-41 370.7 15.9 249 606-878 343-598 (613)
149 3cok_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 332.1 15.5 247 601-872 13-263 (278)
150 3brb_A Proto-oncogene tyrosine 100.0 4.6E-37 1.6E-41 339.3 14.7 261 599-879 34-309 (313)
151 2ac3_A MAP kinase-interacting 100.0 7.6E-37 2.6E-41 337.8 16.5 256 604-872 18-296 (316)
152 1x8b_A WEE1HU, WEE1-like prote 100.0 4.2E-37 1.4E-41 334.0 14.0 246 599-872 11-280 (289)
153 2a19_B Interferon-induced, dou 100.0 9.3E-37 3.2E-41 331.2 16.7 252 595-879 7-275 (284)
154 1u5q_A Serine/threonine protei 100.0 4.3E-37 1.5E-41 345.6 14.5 245 600-872 55-306 (348)
155 2jam_A Calcium/calmodulin-depe 100.0 5.7E-37 2E-41 337.2 15.1 250 599-872 9-262 (304)
156 1p4o_A Insulin-like growth fac 100.0 2.4E-37 8.3E-42 342.8 12.1 260 600-879 26-300 (322)
157 4fl3_A Tyrosine-protein kinase 100.0 3E-37 1E-41 373.1 14.0 249 605-878 375-631 (635)
158 2qr7_A Ribosomal protein S6 ki 100.0 3.9E-37 1.3E-41 345.1 13.7 251 599-872 22-278 (342)
159 2w5a_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42 336.6 10.3 254 601-875 8-271 (279)
160 2v62_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 345.1 13.8 263 599-876 37-326 (345)
161 2yex_A Serine/threonine-protei 100.0 9.2E-37 3.2E-41 330.0 15.8 251 600-872 8-262 (276)
162 2y94_A 5'-AMP-activated protei 100.0 5.8E-37 2E-41 357.8 15.3 245 601-872 18-267 (476)
163 1byg_A CSK, protein (C-termina 100.0 3.6E-37 1.2E-41 334.2 12.6 249 601-878 23-273 (278)
164 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.2E-37 1.1E-41 343.7 12.3 264 600-872 35-319 (329)
165 3dls_A PAS domain-containing s 100.0 5.4E-37 1.8E-41 343.0 14.1 241 599-872 24-275 (335)
166 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.2E-37 2.8E-41 360.9 16.4 251 604-872 190-449 (543)
167 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.7E-36 5.9E-41 342.7 18.4 252 600-879 66-340 (365)
168 4aaa_A Cyclin-dependent kinase 100.0 3.4E-37 1.2E-41 343.5 12.4 264 601-872 27-307 (331)
169 3llt_A Serine/threonine kinase 100.0 3E-37 1E-41 347.8 12.0 267 595-872 31-356 (360)
170 1nxk_A MAP kinase-activated pr 100.0 2.8E-36 9.5E-41 345.5 20.1 247 604-872 67-322 (400)
171 2acx_A G protein-coupled recep 100.0 8.7E-37 3E-41 361.7 16.2 250 602-872 187-445 (576)
172 3ttj_A Mitogen-activated prote 100.0 9.7E-37 3.3E-41 355.8 16.4 260 601-872 64-356 (464)
173 3oz6_A Mitogen-activated prote 100.0 2.6E-37 8.8E-42 352.5 10.7 263 600-872 10-329 (388)
174 3eb0_A Putative uncharacterize 100.0 5.1E-37 1.8E-41 349.5 12.7 267 600-876 8-328 (383)
175 2rku_A Serine/threonine-protei 100.0 1E-36 3.5E-41 333.4 14.5 246 601-872 17-266 (294)
176 2jii_A Serine/threonine-protei 100.0 1.1E-36 3.6E-41 342.7 14.9 262 600-879 43-337 (352)
177 1t4h_A Serine/threonine-protei 100.0 1.6E-36 5.5E-41 331.2 15.5 245 602-872 29-283 (290)
178 3byv_A Rhoptry kinase; malaria 100.0 2.6E-37 9.1E-42 351.1 9.4 240 602-872 76-360 (377)
179 2owb_A Serine/threonine-protei 100.0 1.1E-36 3.8E-41 340.2 14.1 246 601-872 43-292 (335)
180 3i6u_A CDS1, serine/threonine- 100.0 1.3E-36 4.6E-41 350.3 15.1 251 599-872 135-400 (419)
181 2yfx_A Tyrosine-protein kinase 100.0 5.8E-37 2E-41 340.9 11.7 263 598-880 29-306 (327)
182 3mtl_A Cell division protein k 100.0 3.7E-37 1.3E-41 342.4 9.8 262 602-872 5-282 (324)
183 2clq_A Mitogen-activated prote 100.0 2.8E-36 9.6E-41 329.5 16.5 248 605-872 28-279 (295)
184 2vgo_A Serine/threonine-protei 100.0 1.5E-36 5.2E-41 330.3 14.0 244 601-872 16-263 (284)
185 1j1b_A Glycogen synthase kinas 100.0 8.2E-37 2.8E-41 352.2 12.5 262 601-872 56-337 (420)
186 1ua2_A CAK, cell division prot 100.0 1.8E-36 6E-41 340.1 14.5 266 599-872 10-292 (346)
187 3a7i_A MST3 kinase, serine/thr 100.0 2.9E-36 1E-40 331.3 15.9 247 601-873 24-272 (303)
188 3lij_A Calcium/calmodulin depe 100.0 3.6E-36 1.2E-40 354.2 17.7 250 599-872 37-292 (494)
189 3mwu_A Calmodulin-domain prote 100.0 3.8E-36 1.3E-40 353.3 16.7 251 598-872 21-277 (486)
190 4e7w_A Glycogen synthase kinas 100.0 2.4E-36 8.2E-41 345.4 14.3 262 601-872 42-322 (394)
191 3nyv_A Calmodulin-domain prote 100.0 2.5E-36 8.6E-41 354.5 14.7 251 598-872 25-282 (484)
192 2h6d_A 5'-AMP-activated protei 100.0 2.6E-36 9E-41 326.7 13.7 245 601-872 13-262 (276)
193 2y7j_A Phosphorylase B kinase 100.0 1.2E-35 4.1E-40 336.1 19.6 250 600-872 95-360 (365)
194 1u46_A ACK-1, activated CDC42 100.0 1.1E-36 3.9E-41 331.9 10.7 256 600-878 19-284 (291)
195 3rp9_A Mitogen-activated prote 100.0 2.8E-36 9.5E-41 351.7 14.7 192 600-799 54-280 (458)
196 3fme_A Dual specificity mitoge 100.0 4.3E-37 1.5E-41 335.1 7.1 252 601-872 9-267 (290)
197 3mi9_A Cell division protein k 100.0 4.2E-36 1.4E-40 337.4 15.3 265 600-872 18-312 (351)
198 3eqc_A Dual specificity mitoge 100.0 1.6E-36 5.6E-41 342.0 11.9 264 600-872 34-325 (360)
199 1wak_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 344.7 12.9 274 589-872 27-392 (397)
200 1cm8_A Phosphorylated MAP kina 100.0 4E-36 1.4E-40 340.3 15.0 258 601-872 27-308 (367)
201 3n9x_A Phosphotransferase; mal 100.0 6.5E-36 2.2E-40 346.0 16.8 197 600-804 27-253 (432)
202 2r3i_A Cell division protein k 100.0 4.9E-36 1.7E-40 328.5 14.9 264 602-872 6-284 (299)
203 2vwi_A Serine/threonine-protei 100.0 1.8E-36 6E-41 332.2 11.3 261 601-872 17-288 (303)
204 3q60_A ROP5B; pseudokinase, tr 100.0 1.8E-36 6E-41 343.5 11.4 251 602-872 65-353 (371)
205 3com_A Serine/threonine-protei 100.0 7.2E-36 2.4E-40 329.7 16.0 251 598-872 28-279 (314)
206 3pfq_A PKC-B, PKC-beta, protei 100.0 3.3E-36 1.1E-40 366.5 14.6 246 601-872 343-598 (674)
207 3nsz_A CK II alpha, casein kin 100.0 6.7E-36 2.3E-40 332.4 15.9 256 600-872 37-320 (330)
208 1phk_A Phosphorylase kinase; g 100.0 8.1E-36 2.8E-40 326.5 16.3 249 601-872 19-284 (298)
209 3pg1_A Mitogen-activated prote 100.0 2.2E-36 7.5E-41 341.1 12.0 262 601-872 24-317 (362)
210 2ycf_A Serine/threonine-protei 100.0 6.8E-36 2.3E-40 331.6 15.7 252 598-872 9-275 (322)
211 2j7t_A Serine/threonine-protei 100.0 1.7E-36 5.8E-41 332.6 10.6 250 601-872 21-276 (302)
212 2xrw_A Mitogen-activated prote 100.0 1E-35 3.6E-40 337.2 17.0 260 601-872 27-319 (371)
213 3sv0_A Casein kinase I-like; t 100.0 1.2E-35 4.2E-40 347.3 17.7 260 601-879 9-279 (483)
214 3q5i_A Protein kinase; CDPK, m 100.0 8.1E-36 2.8E-40 352.1 16.2 249 600-872 37-302 (504)
215 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-36 1.2E-40 337.2 12.3 256 601-872 33-323 (348)
216 3kvw_A DYRK2, dual specificity 100.0 4.8E-36 1.6E-40 346.7 13.7 197 600-807 98-303 (429)
217 2j0j_A Focal adhesion kinase 1 100.0 5.6E-36 1.9E-40 363.4 14.7 258 599-880 390-653 (656)
218 3qyz_A Mitogen-activated prote 100.0 1.2E-35 4.3E-40 335.6 16.3 263 600-872 28-314 (364)
219 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-35 3.6E-40 330.1 15.2 249 601-872 26-287 (326)
220 3an0_A Dual specificity mitoge 100.0 2E-36 6.9E-41 338.3 9.1 252 601-872 53-311 (340)
221 2wtk_C Serine/threonine-protei 100.0 1.2E-35 4.3E-40 326.2 14.7 248 601-872 7-264 (305)
222 3e3p_A Protein kinase, putativ 100.0 7E-36 2.4E-40 336.3 13.0 266 600-872 24-315 (360)
223 2fst_X Mitogen-activated prote 100.0 1.1E-35 3.7E-40 336.6 14.2 258 601-872 31-312 (367)
224 1zy4_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 321.3 17.6 250 600-872 7-284 (303)
225 1blx_A Cyclin-dependent kinase 100.0 1.1E-35 3.7E-40 329.8 13.7 264 601-872 13-297 (326)
226 2b9h_A MAP kinase FUS3, mitoge 100.0 5.9E-36 2E-40 336.0 11.4 263 601-872 13-306 (353)
227 3rgf_A Cyclin-dependent kinase 100.0 2.1E-35 7.2E-40 338.7 16.0 263 604-872 26-334 (405)
228 2y4i_B KSR2, HKSR2, kinase sup 100.0 9.6E-36 3.3E-40 329.3 11.7 254 601-879 35-303 (319)
229 2i6l_A Mitogen-activated prote 100.0 1.6E-35 5.5E-40 327.0 13.4 262 601-872 13-306 (320)
230 3cek_A Dual specificity protei 100.0 1.1E-35 3.6E-40 328.5 11.7 250 600-873 29-294 (313)
231 4exu_A Mitogen-activated prote 100.0 3.7E-35 1.3E-39 332.7 15.9 258 601-872 44-324 (371)
232 1z57_A Dual specificity protei 100.0 4.2E-35 1.4E-39 326.1 15.9 262 600-872 15-329 (339)
233 2wei_A Calmodulin-domain prote 100.0 4.2E-35 1.4E-39 319.6 15.5 254 595-872 18-277 (287)
234 3coi_A Mitogen-activated prote 100.0 8.3E-35 2.9E-39 327.2 16.2 257 601-872 26-306 (353)
235 2rio_A Serine/threonine-protei 100.0 8.4E-35 2.9E-39 336.8 16.5 249 604-872 20-296 (434)
236 2vx3_A Dual specificity tyrosi 100.0 1.9E-34 6.7E-39 328.0 19.2 199 600-807 55-262 (382)
237 1q8y_A SR protein kinase; tran 100.0 6.7E-35 2.3E-39 329.8 14.5 263 600-872 20-334 (373)
238 2iwi_A Serine/threonine-protei 100.0 2.4E-35 8.2E-40 325.4 10.0 245 594-872 26-284 (312)
239 2eu9_A Dual specificity protei 100.0 8.4E-35 2.9E-39 326.1 14.3 264 598-872 18-334 (355)
240 3aln_A Dual specificity mitoge 100.0 6.4E-35 2.2E-39 324.3 13.2 254 602-872 25-286 (327)
241 3fhr_A MAP kinase-activated pr 100.0 1.7E-34 5.7E-39 322.8 15.7 247 604-872 34-288 (336)
242 3a99_A Proto-oncogene serine/t 100.0 3.5E-35 1.2E-39 325.9 8.7 240 599-872 43-294 (320)
243 2dyl_A Dual specificity mitoge 100.0 6.8E-34 2.3E-38 314.1 15.2 248 602-872 28-284 (318)
244 3p23_A Serine/threonine-protei 100.0 2.8E-34 9.4E-39 332.0 12.5 247 601-872 26-284 (432)
245 2pzi_A Probable serine/threoni 100.0 1.8E-33 6.2E-38 343.9 19.5 240 599-878 80-328 (681)
246 3uqc_A Probable conserved tran 100.0 2.8E-34 9.7E-39 313.7 10.8 236 596-880 28-267 (286)
247 3qa8_A MGC80376 protein; kinas 100.0 3.9E-34 1.3E-38 342.4 12.4 268 599-878 14-309 (676)
248 3dzo_A Rhoptry kinase domain; 100.0 7.9E-34 2.7E-38 326.5 13.7 243 603-876 82-370 (413)
249 2vuw_A Serine/threonine-protei 100.0 3E-33 1E-37 312.3 11.7 245 597-872 18-332 (336)
250 3m2w_A MAP kinase-activated pr 100.0 5E-32 1.7E-36 297.3 17.7 226 604-872 23-257 (299)
251 4azs_A Methyltransferase WBDD; 99.9 4E-27 1.4E-31 280.7 5.3 186 606-803 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 2.1E-24 7.3E-29 255.8 8.6 182 604-803 341-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 1.7E-21 5.7E-26 212.0 7.6 141 604-777 95-253 (282)
254 1zth_A RIO1 serine protein kin 99.7 7.6E-18 2.6E-22 180.6 8.2 134 603-752 51-219 (258)
255 1ogq_A PGIP-2, polygalacturona 99.6 3E-16 1E-20 173.0 9.6 144 373-518 6-160 (313)
256 4gyi_A RIO2 kinase; protein ki 99.6 1.5E-15 5.2E-20 170.1 7.0 135 602-751 98-264 (397)
257 4ecn_A Leucine-rich repeat pro 99.5 3E-15 1E-19 185.7 7.7 141 373-518 269-526 (876)
258 4eco_A Uncharacterized protein 99.5 5.7E-15 2E-19 178.8 7.6 139 373-518 30-284 (636)
259 3rgz_A Protein brassinosteroid 99.5 1.3E-14 4.5E-19 179.6 7.9 113 412-524 630-744 (768)
260 1w8a_A SLIT protein; signaling 99.4 6.6E-13 2.3E-17 135.4 10.0 123 402-524 9-143 (192)
261 3e6j_A Variable lymphocyte rec 99.4 1.2E-12 4.1E-17 137.4 11.2 121 394-518 15-146 (229)
262 3rgz_A Protein brassinosteroid 99.4 2.4E-13 8.3E-18 168.2 6.7 124 373-503 12-169 (768)
263 2jwp_A Malectin, MGC80075; sug 99.3 2.6E-12 8.9E-17 128.8 11.1 139 33-176 8-171 (174)
264 4fcg_A Uncharacterized protein 99.3 2.1E-13 7.3E-18 151.2 3.5 139 373-517 27-193 (328)
265 2wfh_A SLIT homolog 2 protein 99.3 2.6E-12 8.8E-17 131.2 11.0 120 403-524 12-143 (193)
266 2o6r_A Variable lymphocyte rec 99.3 3.9E-12 1.3E-16 127.5 11.1 121 402-523 8-140 (177)
267 2v70_A SLIT-2, SLIT homolog 2 99.3 2.5E-12 8.7E-17 134.0 9.1 113 412-524 55-170 (220)
268 2v9t_B SLIT homolog 2 protein 99.3 5.9E-12 2E-16 131.3 10.4 113 412-524 54-169 (220)
269 1ogq_A PGIP-2, polygalacturona 99.3 1.4E-12 4.8E-17 143.6 5.4 109 416-524 199-308 (313)
270 1w8a_A SLIT protein; signaling 99.3 4.4E-12 1.5E-16 129.2 7.7 113 412-524 52-166 (192)
271 3g39_A Variable lymphocyte rec 99.3 1.2E-11 4.2E-16 123.4 9.8 84 415-498 31-115 (170)
272 3oja_A Leucine-rich immune mol 99.2 2.8E-12 9.5E-17 150.1 5.6 108 413-523 143-253 (487)
273 2v9t_B SLIT homolog 2 protein 99.2 2.1E-11 7.2E-16 127.0 9.6 118 402-519 12-140 (220)
274 3e6j_A Variable lymphocyte rec 99.2 3E-11 1E-15 126.7 10.6 111 412-524 62-176 (229)
275 2o6s_A Variable lymphocyte rec 99.2 3.5E-11 1.2E-15 123.8 10.9 116 402-518 8-135 (208)
276 3g39_A Variable lymphocyte rec 99.2 2.2E-11 7.5E-16 121.5 8.9 105 416-524 11-119 (170)
277 2v70_A SLIT-2, SLIT homolog 2 99.2 3.5E-11 1.2E-15 125.3 9.7 118 402-519 12-141 (220)
278 3m19_A Variable lymphocyte rec 99.2 5.3E-11 1.8E-15 126.4 11.0 111 412-522 81-194 (251)
279 2je0_A Acidic leucine-rich nuc 99.2 1.8E-11 6E-16 119.0 5.9 105 413-518 16-124 (149)
280 2o6s_A Variable lymphocyte rec 99.2 8.1E-11 2.8E-15 121.1 11.2 112 412-524 50-165 (208)
281 2r9u_A Variable lymphocyte rec 99.2 5.1E-11 1.7E-15 119.4 9.4 103 417-523 15-121 (174)
282 2r9u_A Variable lymphocyte rec 99.2 5.3E-11 1.8E-15 119.3 9.4 91 414-505 33-124 (174)
283 2ell_A Acidic leucine-rich nuc 99.2 3.1E-11 1.1E-15 119.8 7.4 104 413-518 23-131 (168)
284 3rfs_A Internalin B, repeat mo 99.2 8.1E-11 2.8E-15 126.6 11.3 113 412-524 107-222 (272)
285 4fcg_A Uncharacterized protein 99.2 3.2E-11 1.1E-15 133.6 8.3 107 413-520 182-290 (328)
286 1p9a_G Platelet glycoprotein I 99.1 9.5E-11 3.2E-15 127.5 10.9 112 412-524 98-212 (290)
287 3m19_A Variable lymphocyte rec 99.1 1.5E-10 5.1E-15 122.9 10.7 105 413-518 58-166 (251)
288 2o6q_A Variable lymphocyte rec 99.1 1.2E-10 3.9E-15 125.2 9.7 105 414-518 37-144 (270)
289 4g8a_A TOLL-like receptor 4; l 99.1 1E-10 3.4E-15 140.6 8.9 113 405-518 35-159 (635)
290 2ifg_A High affinity nerve gro 99.1 9.8E-11 3.4E-15 130.4 8.0 102 419-523 13-119 (347)
291 3tm0_A Aminoglycoside 3'-phosp 99.1 2.8E-10 9.5E-15 121.5 10.8 138 603-750 18-212 (263)
292 2xot_A Amphoterin-induced prot 99.1 1.7E-10 5.9E-15 129.4 8.7 92 413-505 63-155 (361)
293 2o6q_A Variable lymphocyte rec 99.1 4.3E-10 1.5E-14 120.8 11.4 112 412-524 107-222 (270)
294 2o6r_A Variable lymphocyte rec 99.1 2.9E-10 9.9E-15 113.8 9.1 91 412-502 50-141 (177)
295 3v47_A TOLL-like receptor 5B a 99.1 1.5E-10 5.1E-15 133.7 7.8 114 406-519 15-141 (455)
296 3rfs_A Internalin B, repeat mo 99.0 4.3E-10 1.5E-14 120.9 10.7 107 412-518 83-192 (272)
297 1ozn_A Reticulon 4 receptor; N 99.0 2.1E-10 7.3E-15 124.0 8.3 113 412-524 127-242 (285)
298 1p9a_G Platelet glycoprotein I 99.0 4.2E-10 1.4E-14 122.4 10.4 107 411-519 74-184 (290)
299 4g8a_A TOLL-like receptor 4; l 99.0 1.8E-10 6.2E-15 138.3 8.0 113 412-524 467-584 (635)
300 3v47_A TOLL-like receptor 5B a 99.0 2.4E-10 8.3E-15 131.9 8.5 112 412-524 297-412 (455)
301 2ifg_A High affinity nerve gro 99.0 2.9E-10 1E-14 126.6 8.7 98 402-500 9-118 (347)
302 2z66_A Variable lymphocyte rec 99.0 2.5E-10 8.5E-15 124.7 7.6 113 412-524 148-265 (306)
303 2z81_A CD282 antigen, TOLL-lik 99.0 1.8E-10 6.1E-15 136.4 6.8 105 414-518 26-134 (549)
304 2jwp_A Malectin, MGC80075; sug 99.0 2E-10 6.7E-15 115.0 5.7 156 193-367 6-171 (174)
305 4ezg_A Putative uncharacterize 99.0 2.5E-10 8.4E-15 116.6 6.5 105 413-518 87-192 (197)
306 2wfh_A SLIT homolog 2 protein 99.0 5E-10 1.7E-14 114.1 8.5 91 412-502 52-143 (193)
307 2xot_A Amphoterin-induced prot 99.0 4.3E-10 1.5E-14 126.2 8.3 116 403-518 20-147 (361)
308 1dce_A Protein (RAB geranylger 99.0 3.8E-10 1.3E-14 134.2 8.2 85 413-499 462-547 (567)
309 1dce_A Protein (RAB geranylger 99.0 3.6E-10 1.2E-14 134.4 7.9 101 415-519 442-545 (567)
310 3oja_B Anopheles plasmodium-re 99.0 6.1E-10 2.1E-14 133.6 9.4 88 415-502 76-164 (597)
311 4b8c_D Glucose-repressible alc 99.0 3.7E-10 1.3E-14 138.4 7.6 91 413-505 246-336 (727)
312 1nd4_A Aminoglycoside 3'-phosp 99.0 1.4E-09 4.6E-14 115.4 10.9 130 606-750 26-213 (264)
313 2z62_A TOLL-like receptor 4, v 99.0 7.8E-10 2.7E-14 118.9 9.2 105 414-518 28-135 (276)
314 4eco_A Uncharacterized protein 99.0 5.1E-10 1.7E-14 135.4 8.3 108 414-523 488-603 (636)
315 1a9n_A U2A', U2A'; complex (nu 99.0 7.1E-10 2.4E-14 111.0 8.0 102 414-519 19-125 (176)
316 1ozn_A Reticulon 4 receptor; N 99.0 9.5E-10 3.3E-14 118.8 9.5 106 413-518 104-212 (285)
317 3vq2_A TLR4, TOLL-like recepto 99.0 3.9E-10 1.3E-14 135.3 7.0 112 412-524 446-562 (606)
318 2je0_A Acidic leucine-rich nuc 99.0 2.2E-10 7.6E-15 111.1 3.7 89 412-502 40-130 (149)
319 3vq2_A TLR4, TOLL-like recepto 99.0 9.9E-10 3.4E-14 131.7 9.8 124 395-518 4-139 (606)
320 2z80_A TOLL-like receptor 2, v 98.9 5.9E-10 2E-14 124.5 7.2 121 394-518 26-160 (353)
321 3zyi_A Leucine-rich repeat-con 98.9 1.2E-09 4.3E-14 126.2 10.1 116 402-518 55-182 (452)
322 2z62_A TOLL-like receptor 4, v 98.9 1.3E-09 4.5E-14 117.1 9.6 105 413-517 51-159 (276)
323 1wwl_A Monocyte differentiatio 98.9 2.9E-10 9.8E-15 124.9 4.1 87 414-500 95-188 (312)
324 2id5_A Lingo-1, leucine rich r 98.9 1.2E-09 4.1E-14 127.1 9.6 117 402-518 12-139 (477)
325 3zyj_A Leucine-rich repeat-con 98.9 1.1E-09 3.8E-14 126.2 9.0 110 412-524 183-296 (440)
326 2ell_A Acidic leucine-rich nuc 98.9 9.5E-10 3.3E-14 109.0 7.3 83 414-498 49-133 (168)
327 4ecn_A Leucine-rich repeat pro 98.9 9.2E-10 3.2E-14 136.6 8.4 104 415-520 729-840 (876)
328 1a9n_A U2A', U2A'; complex (nu 98.9 5.4E-10 1.9E-14 111.8 4.5 100 414-517 42-150 (176)
329 4b8c_D Glucose-repressible alc 98.9 5.1E-10 1.8E-14 137.1 5.0 104 412-519 222-328 (727)
330 2z63_A TOLL-like receptor 4, v 98.9 1.3E-09 4.3E-14 129.6 8.1 113 412-524 419-535 (570)
331 2z66_A Variable lymphocyte rec 98.9 1.5E-09 5E-14 118.5 7.5 108 412-519 124-235 (306)
332 3oja_B Anopheles plasmodium-re 98.9 2.7E-09 9.4E-14 127.9 10.4 106 412-518 97-203 (597)
333 3zyi_A Leucine-rich repeat-con 98.9 1.6E-09 5.5E-14 125.3 8.1 110 412-524 194-307 (452)
334 1xku_A Decorin; proteoglycan, 98.9 2.1E-09 7.2E-14 118.7 8.4 105 414-520 192-306 (330)
335 3j0a_A TOLL-like receptor 5; m 98.9 1.6E-09 5.4E-14 135.4 8.2 90 414-503 24-115 (844)
336 3o6n_A APL1; leucine-rich repe 98.9 1.2E-09 4.1E-14 123.6 6.0 109 413-523 247-355 (390)
337 2z7x_B TOLL-like receptor 1, v 98.9 1.4E-09 4.9E-14 127.9 6.9 107 412-518 322-432 (520)
338 3o6n_A APL1; leucine-rich repe 98.9 4.4E-09 1.5E-13 118.9 10.4 106 412-518 91-197 (390)
339 3t6q_A CD180 antigen; protein- 98.9 2.5E-09 8.4E-14 128.3 8.8 116 404-519 15-141 (606)
340 3zyj_A Leucine-rich repeat-con 98.9 3.5E-09 1.2E-13 121.9 9.5 117 402-519 44-172 (440)
341 3dxp_A Putative acyl-COA dehyd 98.9 7.4E-09 2.5E-13 115.9 11.8 140 605-751 44-248 (359)
342 2id5_A Lingo-1, leucine rich r 98.9 2.8E-09 9.6E-14 123.9 8.5 105 413-517 55-162 (477)
343 1wwl_A Monocyte differentiatio 98.8 9.6E-10 3.3E-14 120.7 4.1 106 412-518 119-239 (312)
344 4ezg_A Putative uncharacterize 98.8 3E-09 1E-13 108.4 7.6 103 413-518 65-170 (197)
345 3t6q_A CD180 antigen; protein- 98.8 2.4E-09 8.1E-14 128.4 7.8 111 413-524 448-564 (606)
346 3cvr_A Invasion plasmid antige 98.8 1.5E-09 5.1E-14 128.8 5.4 114 389-518 35-151 (571)
347 3a79_B TLR6, VLRB.59, TOLL-lik 98.8 4.8E-09 1.6E-13 124.8 9.4 102 414-518 52-157 (562)
348 3a79_B TLR6, VLRB.59, TOLL-lik 98.8 3.4E-09 1.1E-13 126.1 8.0 107 412-518 351-461 (562)
349 3o53_A Protein LRIM1, AGAP0063 98.8 3E-09 1E-13 117.0 6.9 108 413-523 143-253 (317)
350 4glp_A Monocyte differentiatio 98.8 4.4E-09 1.5E-13 115.2 7.7 105 413-518 116-235 (310)
351 4glp_A Monocyte differentiatio 98.8 1.1E-09 3.7E-14 120.1 2.6 105 413-518 168-283 (310)
352 2z7x_B TOLL-like receptor 1, v 98.8 2.3E-09 7.9E-14 126.0 5.3 101 414-517 21-125 (520)
353 1ziw_A TOLL-like receptor 3; i 98.8 7.3E-09 2.5E-13 126.0 9.8 106 413-518 72-182 (680)
354 2ft3_A Biglycan; proteoglycan, 98.8 8.1E-09 2.8E-13 114.1 9.1 113 402-518 34-158 (332)
355 2z63_A TOLL-like receptor 4, v 98.8 8.1E-09 2.8E-13 122.6 9.6 94 412-505 74-169 (570)
356 3j0a_A TOLL-like receptor 5; m 98.8 6.8E-09 2.3E-13 129.6 9.4 106 412-517 71-184 (844)
357 3oja_A Leucine-rich immune mol 98.8 3.4E-09 1.1E-13 123.9 6.0 105 412-518 56-180 (487)
358 2z81_A CD282 antigen, TOLL-lik 98.8 4.3E-09 1.5E-13 124.5 6.7 90 414-503 50-141 (549)
359 1h6u_A Internalin H; cell adhe 98.8 4.9E-09 1.7E-13 114.9 6.4 102 412-518 127-228 (308)
360 1ziw_A TOLL-like receptor 3; i 98.8 9.1E-09 3.1E-13 125.1 9.4 104 414-517 49-155 (680)
361 1xku_A Decorin; proteoglycan, 98.8 9.6E-09 3.3E-13 113.4 8.5 114 402-518 32-156 (330)
362 2xwt_C Thyrotropin receptor; s 98.8 7E-09 2.4E-13 108.9 6.8 104 413-518 79-190 (239)
363 1xeu_A Internalin C; cellular 98.7 1.7E-08 5.7E-13 108.0 9.3 99 413-518 62-161 (263)
364 4fmz_A Internalin; leucine ric 98.7 8.5E-09 2.9E-13 114.4 6.7 104 412-518 241-344 (347)
365 1h6t_A Internalin B; cell adhe 98.7 1.4E-08 4.9E-13 110.2 8.3 81 413-498 111-191 (291)
366 2ft3_A Biglycan; proteoglycan, 98.7 9.5E-09 3.3E-13 113.6 7.0 101 415-519 34-135 (332)
367 2z80_A TOLL-like receptor 2, v 98.7 9.2E-09 3.1E-13 114.7 6.7 105 413-517 99-208 (353)
368 1h6t_A Internalin B; cell adhe 98.7 1.3E-08 4.3E-13 110.6 7.6 81 413-498 133-213 (291)
369 1h6u_A Internalin H; cell adhe 98.7 1.9E-08 6.4E-13 110.2 8.4 103 412-519 105-207 (308)
370 3cvr_A Invasion plasmid antige 98.7 2.3E-08 7.8E-13 118.6 9.2 91 415-518 121-218 (571)
371 1m9s_A Internalin B; cell inva 98.7 1.9E-08 6.5E-13 120.4 8.5 103 412-520 107-210 (605)
372 1m9s_A Internalin B; cell inva 98.7 2.7E-08 9.1E-13 119.1 9.7 89 412-506 129-217 (605)
373 3sg8_A APH(2'')-ID; antibiotic 98.7 8E-09 2.7E-13 112.9 4.4 184 605-805 26-289 (304)
374 1xeu_A Internalin C; cellular 98.7 3.7E-08 1.3E-12 105.3 9.1 99 413-518 40-139 (263)
375 2xwt_C Thyrotropin receptor; s 98.6 2.9E-08 1E-12 104.2 7.5 102 416-518 132-237 (239)
376 4ay9_X Follicle-stimulating ho 98.6 2.7E-08 9.3E-13 110.9 6.8 103 402-505 10-124 (350)
377 3o53_A Protein LRIM1, AGAP0063 98.6 1.1E-08 3.7E-13 112.5 2.9 98 414-518 34-131 (317)
378 1o6v_A Internalin A; bacterial 98.6 4.6E-08 1.6E-12 113.4 8.0 102 413-519 286-387 (466)
379 3bz5_A Internalin-J, INLJ; leu 98.6 9.4E-08 3.2E-12 110.6 10.0 78 414-499 170-247 (457)
380 1ds9_A Outer arm dynein; leuci 98.6 9.4E-10 3.2E-14 112.3 -6.2 101 413-519 47-152 (198)
381 1o6v_A Internalin A; bacterial 98.6 6E-08 2.1E-12 112.5 8.0 99 414-517 243-341 (466)
382 1ds9_A Outer arm dynein; leuci 98.6 1E-09 3.5E-14 112.0 -6.3 99 415-517 19-125 (198)
383 3bz5_A Internalin-J, INLJ; leu 98.5 1.4E-07 4.7E-12 109.3 9.8 96 413-517 63-158 (457)
384 4fmz_A Internalin; leucine ric 98.5 1.2E-07 4.1E-12 105.1 7.7 102 413-519 220-323 (347)
385 1jl5_A Outer protein YOPM; leu 98.5 2.2E-07 7.7E-12 107.4 9.3 96 414-518 131-226 (454)
386 2ca6_A RAN GTPase-activating p 98.4 2E-08 6.7E-13 113.5 -0.5 105 414-518 187-314 (386)
387 3g06_A SSPH2 (leucine-rich rep 98.4 1.2E-07 3.9E-12 113.8 6.1 85 414-506 221-305 (622)
388 1jl5_A Outer protein YOPM; leu 98.4 1.5E-07 5.1E-12 108.8 6.5 85 414-505 317-418 (454)
389 2ca6_A RAN GTPase-activating p 98.4 1.9E-08 6.6E-13 113.6 -1.1 105 414-518 159-285 (386)
390 2ast_B S-phase kinase-associat 98.4 5.6E-08 1.9E-12 107.2 1.0 103 414-517 70-178 (336)
391 3g06_A SSPH2 (leucine-rich rep 98.3 1.1E-06 3.8E-11 105.3 9.5 73 416-498 42-114 (622)
392 2ast_B S-phase kinase-associat 98.3 8.2E-08 2.8E-12 105.8 -0.7 112 402-519 38-154 (336)
393 3goz_A Leucine-rich repeat-con 98.3 1E-07 3.4E-12 106.8 -0.2 88 415-502 23-126 (362)
394 3rw6_A Nuclear RNA export fact 98.3 3.3E-07 1.1E-11 97.7 3.7 78 413-491 169-257 (267)
395 3d1u_A Putative fructosamine-3 98.3 4.2E-06 1.5E-10 90.5 12.2 75 605-683 21-98 (288)
396 3r70_A Aminoglycoside phosphot 98.2 2.9E-06 1E-10 93.2 11.0 131 605-751 43-237 (320)
397 3goz_A Leucine-rich repeat-con 98.1 4.4E-07 1.5E-11 101.5 0.6 101 418-518 2-120 (362)
398 3tdw_A Gentamicin resistance p 98.1 1.5E-05 5.1E-10 86.9 12.1 134 605-750 25-223 (306)
399 3rw6_A Nuclear RNA export fact 98.1 4.6E-07 1.6E-11 96.5 -0.5 67 435-503 167-238 (267)
400 3ats_A Putative uncharacterize 98.0 1.4E-05 4.7E-10 89.0 10.2 80 605-684 26-122 (357)
401 4ay9_X Follicle-stimulating ho 98.0 6.5E-06 2.2E-10 91.5 7.2 105 414-519 128-235 (350)
402 4gkh_A Aminoglycoside 3'-phosp 98.0 2.7E-05 9.1E-10 82.9 11.6 134 606-750 31-222 (272)
403 1z7x_W Ribonuclease inhibitor; 97.9 9.8E-07 3.4E-11 101.6 -1.7 105 413-517 255-380 (461)
404 3ovc_A Hygromycin-B 4-O-kinase 97.9 3.4E-05 1.2E-09 86.2 10.9 73 605-683 47-122 (362)
405 1z7x_W Ribonuclease inhibitor; 97.9 8.6E-07 2.9E-11 102.1 -2.9 89 414-502 28-130 (461)
406 2q83_A YTAA protein; 2635576, 97.7 0.00013 4.4E-09 80.2 11.2 140 606-750 39-251 (346)
407 2olc_A MTR kinase, methylthior 97.6 0.00015 5.3E-09 81.8 11.1 74 605-680 36-120 (397)
408 3sb4_A Hypothetical leucine ri 97.6 5.3E-05 1.8E-09 83.3 6.9 92 414-508 226-319 (329)
409 3f7w_A Putative fructosamine-3 97.6 0.00024 8.3E-09 76.4 11.6 74 605-682 21-97 (288)
410 3un9_A NLR family member X1; l 97.6 4.8E-06 1.7E-10 93.5 -2.6 84 415-498 156-252 (372)
411 3un9_A NLR family member X1; l 97.6 6.1E-06 2.1E-10 92.7 -2.2 84 415-498 127-224 (372)
412 3jr1_A Putative fructosamine-3 97.4 0.00052 1.8E-08 74.8 11.5 74 605-682 42-118 (312)
413 1io0_A Tropomodulin; LRR prote 97.3 1.8E-05 6E-10 79.6 -1.6 86 414-499 36-137 (185)
414 3ogk_B Coronatine-insensitive 97.3 2.7E-05 9.1E-10 92.6 -1.0 105 414-518 403-524 (592)
415 1io0_A Tropomodulin; LRR prote 97.1 3.7E-05 1.3E-09 77.3 -2.0 86 413-498 64-164 (185)
416 2pyw_A Uncharacterized protein 97.0 0.0019 6.4E-08 73.5 10.3 78 721-800 232-313 (420)
417 2ppq_A HSK, HK, homoserine kin 96.9 0.0025 8.7E-08 69.3 10.3 143 605-750 28-216 (322)
418 3e4g_A ATP synthase subunit S, 96.8 0.00015 5.2E-09 71.8 -0.6 85 414-498 61-153 (176)
419 2p1m_B Transport inhibitor res 96.8 0.00018 6E-09 85.5 -0.4 83 414-496 105-195 (594)
420 1zyl_A Hypothetical protein YI 96.8 0.0048 1.6E-07 67.2 11.0 141 606-750 33-222 (328)
421 3ogk_B Coronatine-insensitive 96.8 0.00049 1.7E-08 81.6 3.1 56 414-469 192-251 (592)
422 3csv_A Aminoglycoside phosphot 96.7 0.0032 1.1E-07 68.9 9.2 141 606-751 25-217 (333)
423 2p1m_B Transport inhibitor res 96.7 0.00012 4E-09 87.0 -2.8 105 413-518 396-517 (594)
424 3dxq_A Choline/ethanolamine ki 96.7 0.0041 1.4E-07 67.1 9.7 70 605-682 24-95 (301)
425 1nw1_A Choline kinase (49.2 KD 96.6 0.0057 2E-07 69.7 10.1 72 605-682 79-159 (429)
426 2ra8_A Uncharacterized protein 96.4 0.0006 2E-08 76.0 0.6 105 413-517 192-317 (362)
427 3sb4_A Hypothetical leucine ri 96.3 0.0038 1.3E-07 68.2 6.4 77 414-492 250-328 (329)
428 3feg_A Choline/ethanolamine ki 96.3 0.012 4E-07 65.9 10.2 141 605-750 56-253 (379)
429 2qg7_A Ethanolamine kinase PV0 96.1 0.026 9E-07 64.7 12.2 74 605-683 114-189 (458)
430 3rfe_A Platelet glycoprotein I 96.1 0.0062 2.1E-07 57.2 5.8 37 462-498 32-68 (130)
431 2ra8_A Uncharacterized protein 96.1 0.00065 2.2E-08 75.7 -1.3 86 413-498 218-320 (362)
432 3c5i_A Choline kinase; choline 96.0 0.014 4.8E-07 64.9 9.2 73 605-682 39-121 (369)
433 3rfe_A Platelet glycoprotein I 95.9 0.0081 2.8E-07 56.4 5.5 55 418-474 12-68 (130)
434 3i1a_A Spectinomycin phosphotr 95.6 0.075 2.6E-06 58.3 12.8 68 608-682 32-108 (339)
435 4fdw_A Leucine rich hypothetic 94.9 0.04 1.4E-06 62.1 7.7 59 433-492 266-330 (401)
436 3f2s_A CK, chetk-alpha, cholin 94.4 0.14 4.9E-06 57.4 10.8 141 606-750 59-279 (401)
437 4fdw_A Leucine rich hypothetic 94.2 0.05 1.7E-06 61.3 6.3 89 413-505 270-364 (401)
438 2yle_A Protein spire homolog 1 94.0 0.19 6.4E-06 51.1 9.3 103 680-802 33-135 (229)
439 3mes_A Choline kinase; malaria 93.9 0.14 4.6E-06 58.0 9.4 73 605-682 76-157 (424)
440 3e4g_A ATP synthase subunit S, 92.7 0.022 7.7E-07 56.2 0.3 82 438-519 61-151 (176)
441 1pgv_A TMD-1, tropomodulin TMD 92.7 0.015 5.3E-07 58.5 -0.9 82 414-495 41-136 (197)
442 1pgv_A TMD-1, tropomodulin TMD 88.8 0.061 2.1E-06 54.1 -0.8 86 413-498 69-170 (197)
443 4fs7_A Uncharacterized protein 87.3 0.53 1.8E-05 52.4 5.5 79 414-495 297-376 (394)
444 4h09_A Hypothetical leucine ri 87.1 0.93 3.2E-05 49.9 7.4 77 415-494 264-342 (379)
445 3g15_A CK, chetk-alpha, cholin 86.2 1.5 5.2E-05 49.0 8.5 29 722-750 245-279 (401)
446 4gt6_A Cell surface protein; l 85.4 1.1 3.9E-05 49.6 7.0 81 414-498 288-370 (394)
447 4gt6_A Cell surface protein; l 83.5 1.7 5.6E-05 48.3 7.2 99 414-517 265-367 (394)
448 4h09_A Hypothetical leucine ri 82.7 2.1 7.1E-05 47.1 7.6 89 414-506 240-329 (379)
449 4ann_A ESSB; membrane protein, 77.7 5 0.00017 40.5 7.6 117 653-805 43-159 (215)
450 4fs7_A Uncharacterized protein 74.8 1.9 6.5E-05 47.8 4.1 73 414-490 320-393 (394)
451 4ano_A ESSB; membrane protein, 73.2 6.7 0.00023 39.7 7.2 115 653-804 48-163 (219)
452 3cxl_A N-chimerin; SH2, RHO-GA 68.6 0.54 1.9E-05 53.8 -2.3 59 604-665 147-214 (463)
453 2ks1_B Epidermal growth factor 57.7 2 6.7E-05 31.7 -0.2 26 532-557 12-38 (44)
454 2jwa_A Receptor tyrosine-prote 56.1 1.2 4.1E-05 32.8 -1.6 28 530-557 11-38 (44)
455 2l2t_A Receptor tyrosine-prote 47.7 2.3 7.8E-05 31.3 -1.2 7 533-539 12-18 (44)
456 2w3j_A Carbohydrate binding mo 30.9 3.2E+02 0.011 25.1 10.8 89 89-181 42-134 (145)
457 2w47_A Lipolytic enzyme, G-D-S 26.5 3.7E+02 0.013 24.5 10.5 85 89-177 43-132 (144)
458 1nrp_R Receptor based peptide 26.1 23 0.00077 21.8 0.9 16 205-220 6-21 (26)
459 1nro_R Receptor based peptide 25.4 26 0.00087 21.8 1.0 17 205-221 6-22 (27)
460 1cja_A Protein (actin-fragmin 23.4 5.5E+02 0.019 27.4 11.7 77 669-751 156-237 (342)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=442.95 Aligned_cols=257 Identities=26% Similarity=0.418 Sum_probs=206.3
Q ss_pred HHhccccccCceEEEEEEEC------CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+||||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 35688999999999999875 477899999987766667889999999999999999999999999999999999
Q ss_pred eccCCchhhhcccccc-----------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEE
Q 002409 676 FMHNGTLKEHLYGTLT-----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 744 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~-----------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~ 744 (927)
||++|+|.++++.... ....++|.+++.|+.|+|+||+|||++ +|+||||||+||||++++++||+
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence 9999999999965321 234689999999999999999999998 99999999999999999999999
Q ss_pred eecCcccccCCCC-ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhh
Q 002409 745 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 745 DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
|||+|+....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||...... .+...+.
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~i~-- 274 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----EAIDCIT-- 274 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH----HHHHHHH--
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH----HHHHHHH--
Confidence 9999986544322 23345679999999999999999999999999999999999 89999765421 2222221
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
++.. ...+.....++.+|+.+|++.||++||||.||+++|+.+.+
T Consensus 275 --~g~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 275 --QGRE---------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp --HTCC---------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --cCCC---------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 1211 01122234568899999999999999999999999998764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5e-50 Score=439.72 Aligned_cols=257 Identities=26% Similarity=0.471 Sum_probs=211.7
Q ss_pred HHhccccccCceEEEEEEEC------CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+||||
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 46789999999999999874 467899999987766667889999999999999999999999999999999999
Q ss_pred eccCCchhhhccccc---------ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEee
Q 002409 676 FMHNGTLKEHLYGTL---------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 746 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~---------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DF 746 (927)
||++|+|.++|+... .....++|.+++.|+.|+|+||+|||++ +|+||||||+|||+++++++||+||
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCc
Confidence 999999999996532 2345799999999999999999999998 9999999999999999999999999
Q ss_pred cCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhc
Q 002409 747 GLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 747 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
|+|+........ ......||+.|||||++.++.|+.++|||||||+||||+| |+.||...... .+...+ .
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~i----~ 244 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIECI----T 244 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHHH----H
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHH----H
Confidence 999865443222 2234569999999999999999999999999999999999 89999765422 222222 2
Q ss_pred cCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 825 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 825 ~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
.+... ..+.....++.+|+.+|++.||++||||.||++.|+++..
T Consensus 245 ~~~~~---------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 245 QGRVL---------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22211 1122234568899999999999999999999999998643
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.6e-50 Score=445.47 Aligned_cols=257 Identities=21% Similarity=0.372 Sum_probs=210.6
Q ss_pred HHHHhccccccCceEEEEEEEC------CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
...|.++||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3457789999999999999873 46789999997543 3345789999999999999999999999999999999
Q ss_pred EEEeccCCchhhhccccc------------ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc
Q 002409 673 VYEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 740 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~ 740 (927)
|||||++|+|.++|.... .....++|..++.|+.|||+||+|||++ +|+||||||+||||+++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 999999999999995432 1235689999999999999999999998 9999999999999999999
Q ss_pred EEEEeecCcccccCCC-CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHH
Q 002409 741 AKVSDFGLSKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQW 818 (927)
Q Consensus 741 vkL~DFGla~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~ 818 (927)
+||+|||+|+...... ........||+.|||||++.++.|+.++|||||||+||||+| |+.||..... ..+.+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~----~~~~~~ 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDVVEM 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----HHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----HHHHHH
Confidence 9999999998654332 223344679999999999999999999999999999999998 8999976542 233333
Q ss_pred HHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 819 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 819 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
+. .+... ..+..+...+.+|+.+|++.+|++||||.||+++|+..
T Consensus 260 i~----~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IR----NRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HH----TTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HH----cCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22 22211 11223445688999999999999999999999999854
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=429.40 Aligned_cols=254 Identities=31% Similarity=0.512 Sum_probs=199.8
Q ss_pred HHhccccccCceEEEEEEECCCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 602 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.++||+|+||+||+|+++ ..||||+++.. ..+..+.|.+|+++|++++|||||+++|+|.+ +..+||||||++
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~g 115 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEG 115 (307)
T ss_dssp CEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSS
T ss_pred EEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCC
Confidence 46788999999999999876 36999998754 23445779999999999999999999999865 568999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC-Cc
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-SH 758 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~-~~ 758 (927)
|+|.++|+.. ...+++..++.|+.|+|+||+|||++ +|+||||||+||||++++++||+|||+|+...... ..
T Consensus 116 GsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 116 SSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999643 45699999999999999999999998 99999999999999999999999999998654322 22
Q ss_pred eeeeeccCCCccCcccccc---CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 759 VSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 759 ~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
......||+.|||||++.. +.|+.++|||||||+||||+||+.||...... ..+...+..... .+.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~---~~~~~~~~~~~~--------~p~ 258 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR---DQIIFMVGRGYA--------SPD 258 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHTTCC--------CCC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH---HHHHHHHhcCCC--------CCC
Confidence 3345679999999999964 46899999999999999999999999754311 111111111111 111
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
+ ..........+.+|+.+|++.+|++||||.||+++|+.+
T Consensus 259 ~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 259 L-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp S-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred c-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1 111223345788999999999999999999999999865
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8.4e-48 Score=426.65 Aligned_cols=250 Identities=22% Similarity=0.275 Sum_probs=204.3
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCC
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 680 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~g 680 (927)
.+.++||+|+||+||+|+++ +|+.||||+++... ...+|+.+|++++|||||++++++.+++..+||||||++|
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 34678999999999999986 68999999997542 2347999999999999999999999999999999999999
Q ss_pred chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC-cEEEEeecCcccccCCCCc-
Q 002409 681 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGASH- 758 (927)
Q Consensus 681 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~-~vkL~DFGla~~~~~~~~~- 758 (927)
+|.++|.. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.++ ++||+|||+|+........
T Consensus 136 ~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 136 SLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp BHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 99999953 45799999999999999999999998 999999999999999987 6999999999865433211
Q ss_pred ---eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 759 ---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 759 ---~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
.....+||+.|||||++.+..|+.++|||||||+||||++|+.||......+....+.. +...
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~--------~~~~------ 274 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS--------EPPP------ 274 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH--------SCCG------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc--------CCCC------
Confidence 12345799999999999999999999999999999999999999976553332222221 1000
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
....+......+.+++.+|++.||++|||+.|++++|..++.
T Consensus 275 -~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 275 -IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp -GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 001122233468899999999999999999999999998765
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.3e-48 Score=428.94 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=206.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
|.+.++||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..+||||||++
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 155 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 344578999999999999986 6899999999866555567789999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.++++||+|||+|+....... .
T Consensus 156 g~L~~~l~-----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 226 (346)
T 4fih_A 156 GALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 226 (346)
T ss_dssp EEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-C
T ss_pred CcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-c
Confidence 99999884 34689999999999999999999998 999999999999999999999999999986644322 3
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .+...+.. +. .+.+..
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~~----~~-----~~~~~~- 292 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIRD----NL-----PPRLKN- 292 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHH----SS-----CCCCSC-
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHHc----CC-----CCCCCc-
Confidence 34567999999999999999999999999999999999999999765421 22221111 10 111110
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
......++.+++.+||+.||++|||+.|+++|
T Consensus 293 -~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 293 -LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11223468899999999999999999999876
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-47 Score=422.23 Aligned_cols=266 Identities=23% Similarity=0.346 Sum_probs=202.0
Q ss_pred HHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecC----eEEEEEEec
Q 002409 602 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEFM 677 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~----~~~lV~E~~ 677 (927)
.+.++||+|+||+||+|++. |+.||||+++.... ....++.|+..+.+++|||||+++++|.+++ ..+||||||
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 35688999999999999985 89999999965422 2233455677778899999999999998764 579999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC-----CCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
++|+|.++|+. ..++|..+++++.|+++||+|||+++ .++|+||||||+||||+.++++||+|||+|+..
T Consensus 84 ~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 84 EHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp TTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999953 45899999999999999999999862 358999999999999999999999999999866
Q ss_pred cCCCCce---eeeeccCCCccCccccccC------cCCCccceeeHHHHHHHHHhCCCcccccccccc-cch------hh
Q 002409 753 VDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISGQEAISNEKFGAN-CRN------IV 816 (927)
Q Consensus 753 ~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~-~~~------l~ 816 (927)
....... .....||+.|||||++.+. .++.++|||||||+||||+||+.|+......+. +.. ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 5443322 2345699999999998754 467899999999999999999888754321110 000 01
Q ss_pred HHHHhhhccCCcccccCCcccCcc-CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 817 QWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 817 ~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
+.......+ ..+++.+.... +.+....+.+|+.+|++.||++||||.||++.|+++.+
T Consensus 239 ~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 239 EEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111111111 11233332222 34566788999999999999999999999999998764
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.3e-48 Score=431.34 Aligned_cols=265 Identities=26% Similarity=0.398 Sum_probs=213.3
Q ss_pred HHHHHHHHhccccccCceEEEEEEECC------CcEEEEEEeecCCc-hhhHhHHHHHHHHhhccC-CCccceecceeec
Q 002409 596 IEDATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHH-RNLVQFLGYCQEE 667 (927)
Q Consensus 596 i~~~~~~~~~~IG~G~fG~Vy~~~~~~------g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~H-pnIv~l~g~~~~~ 667 (927)
+....+.+.+.||+|+||+||+|++.. ++.||||+++.... ...+.|.+|+++|.+++| ||||+++|+|.+.
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 444556678899999999999998652 36799999976543 335679999999999965 9999999999764
Q ss_pred -CeEEEEEEeccCCchhhhcccccc------------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeE
Q 002409 668 -GRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 734 (927)
Q Consensus 668 -~~~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NIL 734 (927)
+..++|||||++|+|.++|+.... ....+++..++.++.|||+||+|||++ +|+||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcccee
Confidence 568999999999999999965321 134589999999999999999999998 9999999999999
Q ss_pred ECCCCcEEEEeecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCccccccccccc
Q 002409 735 LDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANC 812 (927)
Q Consensus 735 l~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~ 812 (927)
+++++.+||+|||+|+........ ......||+.|||||++.++.|+.++|||||||+||||+| |+.||......+
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-- 295 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-- 295 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--
Confidence 999999999999999866544333 3345679999999999999999999999999999999998 999997654221
Q ss_pred chhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 813 RNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 813 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.+.. .+.++... ..+.....++.+++.+|++.||++|||+.||+++|+++++.
T Consensus 296 -~~~~----~i~~g~~~---------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 296 -EFCR----RLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp -HHHH----HHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHHH----HHHcCCCC---------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 1222 12222111 11122234688999999999999999999999999998764
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-46 Score=410.85 Aligned_cols=247 Identities=28% Similarity=0.439 Sum_probs=196.5
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceee----cCeEEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 674 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~----~~~~~lV~ 674 (927)
.+.++||+|+||+||+|++. +++.||||++... .....+.|.+|+++|++++|||||++++++.. ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 35678999999999999876 5889999999754 23345679999999999999999999999865 34679999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC-CCcEEEEeecCccccc
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAV 753 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~-~~~vkL~DFGla~~~~ 753 (927)
|||++|+|.+++.. ...+++..+..++.||+.||+|||++. ++|+||||||+||||+. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999953 457899999999999999999999971 13999999999999984 7999999999998543
Q ss_pred CCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 754 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 754 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
. ......+||+.|||||++. +.|+.++|||||||+||||++|+.||...... ..+.. .+..+.....+
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~---~~~~~----~i~~~~~~~~~- 251 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA---AQIYR----RVTSGVKPASF- 251 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---HHHHH----HHTTTCCCGGG-
T ss_pred C---CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH---HHHHH----HHHcCCCCCCC-
Confidence 2 2334567999999999886 46999999999999999999999999654311 11212 11122111111
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+.....++.+++.+|++.||++|||+.|+++|
T Consensus 252 -------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 252 -------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11122357899999999999999999999875
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8e-48 Score=428.73 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=199.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
|.+.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..+||||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~ 105 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 556789999999999999876 68999999997543 334567899999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++|+|.++|... ....+++..++.++.||+.||+|||++ +|+||||||+||||+.++++||+|||+|+..... .
T Consensus 106 ~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 106 EGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp TTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 999999999542 244578899999999999999999998 9999999999999999999999999999865322 1
Q ss_pred ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCccc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 837 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 837 (927)
......+||+.|||||++.+..|+.++|||||||+||||++|+.||......+ +...+ ..+... .+.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~~i----~~~~~~-----~~~ 246 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN----LVLKI----ISGSFP-----PVS 246 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHH----HHTCCC-----CCC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHHH----HcCCCC-----CCC
Confidence 22344579999999999999999999999999999999999999997654221 22111 112211 111
Q ss_pred CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 838 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 838 ~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. ....++.+|+.+||+.||++|||+.|++++
T Consensus 247 ~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 L----HYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c----cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 223468899999999999999999999875
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-47 Score=420.56 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=205.9
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||+||+|+.. +++.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 567899999999999999876 68999999997542 23346789999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
|++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 114 ~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 114 AKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred CCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999994 346799999999999999999999998 99999999999999999999999999998765432
Q ss_pred -CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 757 -SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 757 -~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+....+. .+.+ .
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~--------~~~~------~ 252 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII--------KLEY------D 252 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--------HTCC------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--------cCCC------C
Confidence 233455679999999999999999999999999999999999999997654222222221 1111 0
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+... ...++.+|+.+||+.||++|||+.|+..+
T Consensus 253 ~p~~----~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 253 FPEK----FFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp CCTT----CCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCcc----cCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 1111 22357899999999999999999987543
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.4e-47 Score=429.96 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=206.5
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
|.+.++||+|+||.||+|++. +|+.||||++........+.+.+|+++|++++|||||++++++.+.+..+||||||++
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 344678999999999999986 6899999999876666667899999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+....... .
T Consensus 233 G~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 303 (423)
T 4fie_A 233 GALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 303 (423)
T ss_dssp EEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-C
T ss_pred CcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-c
Confidence 99999884 34589999999999999999999998 999999999999999999999999999986644332 3
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .+...+.. +. .+.+..
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~~----~~-----~~~~~~- 369 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIRD----NL-----PPRLKN- 369 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHH----SC-----CCCCSC-
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHHc----CC-----CCCCcc-
Confidence 34567999999999999999999999999999999999999999765421 22221111 11 011110
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.......+.+|+.+||+.||++|||+.|+++|
T Consensus 370 -~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 -LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11122468899999999999999999999876
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-46 Score=405.73 Aligned_cols=245 Identities=23% Similarity=0.382 Sum_probs=189.9
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.|.+.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+++|++++||||+++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3567789999999999999875 68999999997542 2234678999999999999999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+...+.
T Consensus 94 y~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 94 YA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp CC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred CC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99 6899998843 45799999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
. ......||+.|||||++.+..+ +.++||||+||++|||++|+.||......+ +.+.+ ..+...
T Consensus 166 ~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~----~~~~i----~~~~~~----- 230 (275)
T 3hyh_A 166 N--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFKNI----SNGVYT----- 230 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH----HHTCCC-----
T ss_pred C--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH----HHHHH----HcCCCC-----
Confidence 2 2344679999999999998876 579999999999999999999997654222 22211 112110
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+... ...++.+++.+|++.||++|||+.|+++|
T Consensus 231 -~p~~----~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 231 -LPKF----LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -CCCC----CCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1111 22457899999999999999999999875
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.2e-46 Score=412.48 Aligned_cols=246 Identities=26% Similarity=0.330 Sum_probs=194.6
Q ss_pred HHHhccccccCceEEEEEEEC----CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~----~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
|.+.+.||+|+||+||+|+.. .++.||||+++... ......+.+|+++|++++|||||++++++.+++..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 557789999999999999863 46789999997542 223446889999999999999999999999999999999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
|||++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+|+....
T Consensus 106 Ey~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 106 DFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp CCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 9999999999984 345799999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ +...+. ++..
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----~~~~i~----~~~~------ 243 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----TMTMIL----KAKL------ 243 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHH----HCCC------
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----HHHHHH----cCCC------
Confidence 322 2344679999999999999999999999999999999999999997654222 222111 1111
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPs-----m~eV~~~ 872 (927)
. ++.....++.+++.+||+.||++||| ++|+++|
T Consensus 244 ~----~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 G----MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred C----CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 0 11112246789999999999999998 4677654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.4e-44 Score=395.06 Aligned_cols=249 Identities=24% Similarity=0.328 Sum_probs=186.7
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeecC----------
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG---------- 668 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~---------- 668 (927)
|.+.+.||+|+||+||+|+.+ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 445689999999999999876 689999999975543 33567899999999999999999999987544
Q ss_pred --eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEee
Q 002409 669 --RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 746 (927)
Q Consensus 669 --~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DF 746 (927)
..++|||||++|+|.+++.... ......+..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 3689999999999999996532 223456677889999999999999998 9999999999999999999999999
Q ss_pred cCcccccCCCCc-----------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchh
Q 002409 747 GLSKFAVDGASH-----------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 815 (927)
Q Consensus 747 Gla~~~~~~~~~-----------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l 815 (927)
|+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||.... ..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------~~ 233 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ER 233 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------HH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------HH
Confidence 999865432211 1233569999999999999999999999999999999996 665322 01
Q ss_pred hHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 816 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 816 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.... .......... ........+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~-~~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 VRTL-TDVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHH-HHHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHH-HHHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1100 1111111111 011222346789999999999999999999875
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.9e-42 Score=384.29 Aligned_cols=274 Identities=42% Similarity=0.744 Sum_probs=240.1
Q ss_pred HHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCCc
Q 002409 602 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 681 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gs 681 (927)
.+.+.||+|+||.||+|++++++.||||++........+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 121 (321)
T 2qkw_B 42 DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121 (321)
T ss_dssp SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCB
T ss_pred CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc
Confidence 34678999999999999988899999999887666667789999999999999999999999999999999999999999
Q ss_pred hhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC-CCcee
Q 002409 682 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG-ASHVS 760 (927)
Q Consensus 682 L~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~-~~~~~ 760 (927)
|.+++.........+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .....
T Consensus 122 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp TGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 9999976544455789999999999999999999998 9999999999999999999999999999754332 22223
Q ss_pred eeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCcc
Q 002409 761 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 840 (927)
Q Consensus 761 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 840 (927)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||.... +.....+..|.......+.+...+++.+....
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS-SSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC-cHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 34568999999999999999999999999999999999999997654 33344667777777777788888888888888
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 841 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 841 ~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
..+....+.+++.+|++.+|++|||+.||+++|+.++..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 888899999999999999999999999999999998753
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-42 Score=386.33 Aligned_cols=288 Identities=35% Similarity=0.656 Sum_probs=248.0
Q ss_pred cccCHHHHHHHHHH--HhccccccCceEEEEEEECCCcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceeccee
Q 002409 589 HCFTLSDIEDATKM--LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 665 (927)
Q Consensus 589 ~~~~~~ei~~~~~~--~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~ 665 (927)
..+++.++.....+ +.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 44666666655443 4688999999999999988899999999876532 23446899999999999999999999999
Q ss_pred ecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEe
Q 002409 666 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 745 (927)
Q Consensus 666 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~D 745 (927)
..+..++||||+++|+|.+++.........+++..+..++.|++.||+|||+++.++|+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999977655566799999999999999999999998667999999999999999999999999
Q ss_pred ecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccc-ccccchhhHHHHhhhc
Q 002409 746 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-GANCRNIVQWAKLHIE 824 (927)
Q Consensus 746 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~-~~~~~~l~~~~~~~~~ 824 (927)
||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.+|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 999987655555555556699999999999988999999999999999999999999974332 2233467778888888
Q ss_pred cCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 825 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 825 ~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
...+....+..+...+..+....+.+++.+|++.+|++|||+.||+++|++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 8888888998888888899999999999999999999999999999999864
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=393.67 Aligned_cols=263 Identities=19% Similarity=0.280 Sum_probs=198.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceee------cCeEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRSV 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~------~~~~~ 671 (927)
|.+.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+..+
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 556789999999999999876 68999999997543 2334678899999999999999999998753 36789
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
||||||+ |+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 136 ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 136 VVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 9999996 68988884 346799999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCC---CceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 752 AVDGA---SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 752 ~~~~~---~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||......+....+......... ..
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~-~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP-AV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG-GG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh-HH
Confidence 54321 2233456799999999998875 5689999999999999999999999765422222222221110000 00
Q ss_pred ccc-----------ccCCcccC---ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 828 IQG-----------IIDPSLLD---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 828 ~~~-----------~~d~~l~~---~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... .+.+.... ........++.+|+.+||+.||++|||+.|+++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 00000000 0001112467899999999999999999999886
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.9e-42 Score=406.77 Aligned_cols=250 Identities=24% Similarity=0.357 Sum_probs=206.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
|.+.+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|++++||||+++++++.+.+..+||||||++
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g 238 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence 456789999999999999886 6899999999876655667889999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC--CcEEEEeecCcccccCCCC
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH--MRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~--~~vkL~DFGla~~~~~~~~ 757 (927)
|+|.++|.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 239 g~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 239 GELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 999998853 245689999999999999999999998 99999999999999854 89999999999876443
Q ss_pred ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCccc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 837 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 837 (927)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+. ...+. .+.. .++....
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----~~~i~----~~~~--~~~~~~~ 380 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVK----SCDW--NMDDSAF 380 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHH----TTCC--CCCSGGG
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHH----hCCC--CCCcccc
Confidence 233456799999999999999999999999999999999999999976542221 11111 1110 0111111
Q ss_pred CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 838 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 838 ~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. ....+.+|+.+||+.||++|||+.|+++|
T Consensus 381 ~~----~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 SG----ISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cC----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 22357899999999999999999999986
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.7e-41 Score=382.35 Aligned_cols=194 Identities=25% Similarity=0.376 Sum_probs=165.5
Q ss_pred HHHhccccccCceEEEEEEEC----CCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~----~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
|.+.++||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|+++ +||||+++++++.+.++.++|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 556789999999999999764 46789999986543 345678999999998 69999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC-CcEEEEeecCcccccC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAVD 754 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~-~~vkL~DFGla~~~~~ 754 (927)
|+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 101 ~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 101 YLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp CCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred CCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 999999999883 478889999999999999999998 99999999999999877 7999999999975433
Q ss_pred CCC---------------------------ceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCccccc
Q 002409 755 GAS---------------------------HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNE 806 (927)
Q Consensus 755 ~~~---------------------------~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~ 806 (927)
... ......+||+.|||||++.+. .|+.++||||+||++|||++|+.||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 211 112234699999999999775 5899999999999999999999999543
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.1e-41 Score=398.82 Aligned_cols=246 Identities=25% Similarity=0.319 Sum_probs=196.5
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHH---HHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTN---EVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~---Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
.+.+.||+|+||+||+|+.+ +|+.||||++.+.. ......+.+ ++.+++.++|||||++++++.+.+..+|||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVm 271 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEE
Confidence 34678999999999999886 68999999997532 112223333 466777889999999999999999999999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
|||+||+|.++|. ....+++..+..++.||+.||+|||++ +|+||||||+||||+.+|++||+|||+|+....
T Consensus 272 Ey~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 272 DLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred ecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999994 346799999999999999999999998 999999999999999999999999999986644
Q ss_pred CCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
.. ....+||+.|||||++.. ..|+.++|+|||||+||||++|+.||........ ..+..... ...+
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~i~----~~~~----- 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTL----TMAV----- 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHHHH----HCCC-----
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhhc----CCCC-----
Confidence 32 234579999999999975 5799999999999999999999999976542211 11222111 1111
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPs-----m~eV~~~ 872 (927)
.+... ...++.+|+.+||+.||++|++ +.||.+|
T Consensus 412 -~~p~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 412 -ELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -CCCTT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -CCCcc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 11111 2235789999999999999998 7888876
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=362.32 Aligned_cols=256 Identities=25% Similarity=0.394 Sum_probs=209.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
+.+.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 91 (310)
T 3s95_A 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91 (310)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCC
Confidence 345689999999999999886 5889999998776666678899999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 92 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 92 GTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999998642 45689999999999999999999998 99999999999999999999999999998654332211
Q ss_pred -------------eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccccccc--chhhHHHHhhhc
Q 002409 760 -------------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC--RNIVQWAKLHIE 824 (927)
Q Consensus 760 -------------~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~--~~l~~~~~~~~~ 824 (927)
.....||+.|+|||.+.+..++.++|||||||++|||++|..|+......... ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-- 243 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY-- 243 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--
Confidence 11456999999999999999999999999999999999999998654321111 0111111100
Q ss_pred cCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 825 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 825 ~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.+......+.+++.+|++.+|++|||+.|+++.|+.+...
T Consensus 244 ---------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 ---------------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp ---------------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0111223588999999999999999999999999988653
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.9e-40 Score=361.71 Aligned_cols=258 Identities=31% Similarity=0.475 Sum_probs=201.5
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 38 ~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 116 (309)
T 3p86_A 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYL 116 (309)
T ss_dssp GEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECC
T ss_pred HceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecC
Confidence 4456789999999999999885 8899999987553 233467889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCc--eecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
++|+|.+++... .....+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+|||+++.....
T Consensus 117 ~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 117 SRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp TTCBHHHHHHST-THHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCcHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 999999998643 2234589999999999999999999998 7 999999999999999999999999999754332
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+...+.......
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~----~~~~~~~~~~~~~--------- 258 (309)
T 3p86_A 193 F-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAVGFKCKRL--------- 258 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHHHHSCCCC---------
T ss_pred c-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCCC---------
Confidence 1 2233456999999999999999999999999999999999999999764421 1222211111111
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
..+......+.+++.+|++.+|++|||+.||++.|+.++..
T Consensus 259 ---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 259 ---EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11112234688999999999999999999999999998754
No 24
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=368.62 Aligned_cols=261 Identities=26% Similarity=0.442 Sum_probs=209.0
Q ss_pred HHHHHHHHhccccccCceEEEEEEEC----CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeE
Q 002409 596 IEDATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 670 (927)
Q Consensus 596 i~~~~~~~~~~IG~G~fG~Vy~~~~~----~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~ 670 (927)
+....+.+.+.||+|+||.||+|++. .+..||||+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 33445566789999999999999985 34569999997653 34456799999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 671 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 9999999999999998532 35689999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCc--eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCC
Q 002409 751 FAVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 751 ~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+.. +.
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~~----~~ 271 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----DVISSVEE----GY 271 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH----HHHHHHHT----TC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHHHc----CC
Confidence 65443222 2223346788999999998999999999999999999999 99999764421 22221111 10
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
....+......+.+++.+|++.+|++||++.||++.|+.++..
T Consensus 272 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 272 ---------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ---------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 0111122334688999999999999999999999999998753
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-39 Score=357.34 Aligned_cols=248 Identities=24% Similarity=0.345 Sum_probs=203.9
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
|.+.+.||+|+||.||+|+.. +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 101 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence 445678999999999999864 6899999999766555567789999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 102 ~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 102 GSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 999999843 3588999999999999999999998 999999999999999999999999999986544332 2
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+.... ..+.. .. .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~----~~~~~-~~-------~ 237 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---ALYLIA----TNGTP-EL-------Q 237 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHH----HHCSC-CC-------S
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHH----hCCCC-CC-------C
Confidence 334569999999999999999999999999999999999999997544111 111111 11100 00 0
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+......+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111223468899999999999999999999886
No 26
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.2e-38 Score=350.92 Aligned_cols=281 Identities=35% Similarity=0.579 Sum_probs=226.7
Q ss_pred ccccCHHHHHHHHHHHh--------ccccccCceEEEEEEECCCcEEEEEEeecCC----chhhHhHHHHHHHHhhccCC
Q 002409 588 AHCFTLSDIEDATKMLE--------KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHR 655 (927)
Q Consensus 588 ~~~~~~~ei~~~~~~~~--------~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~----~~~~~~~~~Ei~iL~~l~Hp 655 (927)
.+.+++.++...+.++. +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 35688899998888774 5699999999999987 48899999987532 23356789999999999999
Q ss_pred CccceecceeecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE
Q 002409 656 NLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 735 (927)
Q Consensus 656 nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl 735 (927)
||+++++++...+..++||||+++|+|.+++... .....+++..++.++.|++.||+|||++ +|+||||||+|||+
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999998643 2345689999999999999999999998 99999999999999
Q ss_pred CCCCcEEEEeecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccch
Q 002409 736 DKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 814 (927)
Q Consensus 736 ~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~ 814 (927)
+.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||++|||++|+.||...........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 99999999999999865443222 2334568999999998764 588999999999999999999999986553333222
Q ss_pred hhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 815 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 815 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
+.+.... ....+.+.+++.+. .........+.+++.+|++.+|++||++.||+++|+++.
T Consensus 246 ~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 246 IKEEIED--EEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHHT--TSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHhhh--hhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 2221111 12233444444442 345667778999999999999999999999999999863
No 27
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-39 Score=369.90 Aligned_cols=261 Identities=24% Similarity=0.430 Sum_probs=210.3
Q ss_pred HHHHhccccccCceEEEEEEEC--------CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhc-cCCCccceecceeecCe
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 669 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~--------~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~ 669 (927)
.+.+.+.||+|+||.||+|++. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 161 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence 3456789999999999999863 345799999976533 3356789999999999 89999999999999999
Q ss_pred EEEEEEeccCCchhhhcccccc------------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC
Q 002409 670 SVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 737 (927)
Q Consensus 670 ~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~ 737 (927)
.++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.
T Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 238 (370)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECC
Confidence 9999999999999999965321 234588999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchh
Q 002409 738 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 815 (927)
Q Consensus 738 ~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l 815 (927)
++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----~~ 314 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----EL 314 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GH
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----HH
Confidence 999999999999865433221 2223457889999999999999999999999999999999 99999764422 22
Q ss_pred hHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 816 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 816 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
..... .+.. ...+......+.+++.+|++.+|++||++.|++++|++++...
T Consensus 315 ~~~~~----~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 315 FKLLK----EGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHHH----TTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHh----cCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 22111 1111 1111223346889999999999999999999999999998653
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.7e-40 Score=353.08 Aligned_cols=256 Identities=29% Similarity=0.462 Sum_probs=209.7
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.+.||+|+||.||+|+.+++..||||+++.... ...++.+|++++++++||||+++++++...+..++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (268)
T 3sxs_A 9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN 87 (268)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred heeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence 3456789999999999999999888999999975543 356789999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 88 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 88 GCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred CcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999998542 34689999999999999999999998 99999999999999999999999999998665543333
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+ .... ...+. ....+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~----~~~~~--~~~~~---- 227 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE----VVLK----VSQGH--RLYRP---- 227 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHHH----HHTTC--CCCCC----
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH----HHHH----HHcCC--CCCCC----
Confidence 334456778999999998899999999999999999999 999997544211 1111 11111 00011
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
......+.+++.+|++.+|++|||+.|++++|+.+...
T Consensus 228 ---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 ---HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ---TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ---CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11123688999999999999999999999999987543
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-39 Score=352.37 Aligned_cols=254 Identities=28% Similarity=0.466 Sum_probs=208.5
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 680 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~g 680 (927)
+.+.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence 445688999999999999998899999999975543 3567899999999999999999999999999999999999999
Q ss_pred chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCcee
Q 002409 681 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 760 (927)
Q Consensus 681 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 760 (927)
+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 91 ~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 91 CLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp BHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999998542 34689999999999999999999998 999999999999999999999999999986543322222
Q ss_pred eeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 761 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 761 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
....+|+.|+|||.+....++.++||||||+++|||++ |+.||...... .+...... +. ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~----~~~~~~~~----~~--~~~~------ 228 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIST----GF--RLYK------ 228 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHHHT----TC--CCCC------
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH----HHHHHHhc----Cc--cCCC------
Confidence 33456788999999998999999999999999999999 99999764421 12221111 10 0001
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
+......+.+++.+|++.+|++||++.|++++|+++..
T Consensus 229 -~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 229 -PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 11123468899999999999999999999999999864
No 30
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=365.51 Aligned_cols=247 Identities=21% Similarity=0.333 Sum_probs=194.4
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~ 91 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCP 91 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence 445789999999999999875 789999999976532 334578899999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 758 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 758 (927)
+|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.........
T Consensus 92 gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 92 GGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp TCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 9999999843 45689999999999999999999998 9999999999999999999999999998765444333
Q ss_pred eeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCccc
Q 002409 759 VSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 837 (927)
Q Consensus 759 ~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 837 (927)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......+ +... +..+...
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~----~~~~----i~~~~~~-------- 228 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA----LYKK----IMRGKYD-------- 228 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHTCCC--------
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHH----HHcCCCC--------
Confidence 3445679999999999988775 889999999999999999999997654221 1111 1111110
Q ss_pred CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 838 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 838 ~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+......+.+++.+|++.||++|||+.|++++
T Consensus 229 --~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 229 --VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 011122357889999999999999999999886
No 31
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.5e-40 Score=372.12 Aligned_cols=257 Identities=24% Similarity=0.420 Sum_probs=197.9
Q ss_pred HHHHhccccccCceEEEEEEEC----CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~----~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
.+.+.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 4456789999999999999875 56789999997653 334567999999999999999999999999999999999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 126 e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 126 EYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp ECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred eCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999532 34689999999999999999999998 999999999999999999999999999986544
Q ss_pred CCCce--eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 755 GASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 755 ~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
..... .....+++.|+|||++....++.++|||||||++|||++ |+.||...... .+...+....
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~----~~~~~i~~~~-------- 267 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGY-------- 267 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH----HHHHHHHTTE--------
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCC--------
Confidence 32221 122335778999999999999999999999999999998 99999754421 2222211110
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
....+......+.+++.+|++.+|++||++.||++.|++++..
T Consensus 268 -----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 -----RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0111122345688999999999999999999999999998754
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8e-39 Score=355.54 Aligned_cols=260 Identities=23% Similarity=0.361 Sum_probs=211.6
Q ss_pred cccCHHHHHHHHHH------------HhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCC
Q 002409 589 HCFTLSDIEDATKM------------LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR 655 (927)
Q Consensus 589 ~~~~~~ei~~~~~~------------~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hp 655 (927)
..++..++..++.. ..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677787777653 2457999999999999987 7999999999876666667899999999999999
Q ss_pred CccceecceeecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE
Q 002409 656 NLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 735 (927)
Q Consensus 656 nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl 735 (927)
||+++++++...+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999884 24589999999999999999999998 99999999999999
Q ss_pred CCCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchh
Q 002409 736 DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 815 (927)
Q Consensus 736 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l 815 (927)
+.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----~~ 249 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----QA 249 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HH
T ss_pred CCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HH
Confidence 9999999999999976543322 223456999999999999999999999999999999999999999754311 11
Q ss_pred hHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 816 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 816 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...... ... +.+.. .......+.+++.+|++.+|++|||+.|++++
T Consensus 250 ~~~~~~----~~~-----~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRD----SPP-----PKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHH----SSC-----CCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhc----CCC-----CCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 110 11111 11123468899999999999999999999986
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1e-39 Score=355.00 Aligned_cols=256 Identities=28% Similarity=0.455 Sum_probs=207.0
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.+.||+|+||.||++++.++..||||+++.... ..+++.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 103 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence 4556789999999999999999888999999975543 356789999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 104 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 104 GCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred CcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999998542 35689999999999999999999998 99999999999999999999999999998654322222
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....+|+.|+|||.+....++.++||||||+++|||++ |+.||......+ ...... .+. . .
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~----~~~~~~----~~~-----~----~ 240 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIA----QGL-----R----L 240 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHHHHH----TTC-----C----C
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH----HHHHHh----ccc-----C----C
Confidence 233446788999999998899999999999999999998 999997644211 111111 110 0 0
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
..+......+.+++.+|++.+|++|||+.|++++|++++..
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 01111124688999999999999999999999999998754
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-39 Score=360.07 Aligned_cols=266 Identities=27% Similarity=0.358 Sum_probs=204.7
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecC----eEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~----~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ..++||||
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~ 103 (322)
T 3soc_A 26 LQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF 103 (322)
T ss_dssp EEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred chhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence 446789999999999999987 8999999996543 23445677999999999999999999998754 36999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC-------CCceecCCCCCCCeEECCCCcEEEEeecCc
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-------VPAIIHRDLKSSNILLDKHMRAKVSDFGLS 749 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------~~~ivHrDLkp~NILl~~~~~vkL~DFGla 749 (927)
+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 104 ~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 104 HEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp CTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999843 45899999999999999999999852 238999999999999999999999999999
Q ss_pred ccccCCCCc-eeeeeccCCCccCcccccc-----CcCCCccceeeHHHHHHHHHhCCCcccccccccccc---------h
Q 002409 750 KFAVDGASH-VSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR---------N 814 (927)
Q Consensus 750 ~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~---------~ 814 (927)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 765443222 2233569999999999976 356678899999999999999999997543211100 1
Q ss_pred hhHHHHhhhccCCcccccCCcccCcc-CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 815 IVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 815 l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
...+..... ... ..+.+.... .......+.+++.+|++.||++|||+.||++.|+++..
T Consensus 259 ~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVV-HKK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHT-TSC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhh-ccc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111111111 111 111111111 22455679999999999999999999999999998854
No 35
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.6e-40 Score=360.16 Aligned_cols=265 Identities=27% Similarity=0.395 Sum_probs=205.1
Q ss_pred HHHHHhccccccCceEEEEEEEC-----CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceee--cCeEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSV 671 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-----~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~~~ 671 (927)
..+.+.+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 34556789999999999999852 588999999987666666789999999999999999999999854 45689
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 90 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 999999999999998543 34589999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCc--eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccc--------cccchhhHHHHh
Q 002409 752 AVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG--------ANCRNIVQWAKL 821 (927)
Q Consensus 752 ~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~--------~~~~~l~~~~~~ 821 (927)
....... ......++..|+|||.+.+..++.++|||||||++|||++|..|+...... ............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 5433221 222334677899999999999999999999999999999999988643210 000011111111
Q ss_pred hhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 822 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 822 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
....+. ....+......+.+++.+|++.+|++|||+.||++.|+++..
T Consensus 244 ~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 244 LLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccC---------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 111111 111122334578899999999999999999999999998864
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.8e-39 Score=359.28 Aligned_cols=245 Identities=24% Similarity=0.407 Sum_probs=201.9
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
|.+.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 445689999999999999884 7899999999754 2334567889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 97 SGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp TTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 99999999843 45689999999999999999999998 99999999999999999999999999998654332
Q ss_pred ceeeeeccCCCccCccccccCcCC-CccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
......||+.|+|||++.+..+. .++|||||||++|||++|+.||...... .+.+. +..+...
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~----i~~~~~~------- 232 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK----ELRER----VLRGKYR------- 232 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHCCCC-------
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH----HHHHH----HHhCCCC-------
Confidence 23345699999999999888765 7899999999999999999999765422 11111 1111110
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+......+.+++.+|++.||++|||+.|++++
T Consensus 233 ---~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 233 ---IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ---CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ---CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011122457899999999999999999999886
No 37
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=347.94 Aligned_cols=271 Identities=21% Similarity=0.289 Sum_probs=210.8
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecC--eEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~--~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 445789999999999999887 48999999997543 233567889999999999999999999987655 77999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE----CCCCcEEEEeecCcccc
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl----~~~~~vkL~DFGla~~~ 752 (927)
+++|+|.+++.... ....+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999996532 223489999999999999999999998 99999999999999 78888999999999865
Q ss_pred cCCCCceeeeeccCCCccCccccc--------cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhc
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYI--------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...........+.........
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 44322 23346999999999986 467899999999999999999999999754433222222222221111
Q ss_pred cCCccccc-----------CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 825 SGDIQGII-----------DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 825 ~~~~~~~~-----------d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
...+.... +..............+.+++.+|++.||++|||+.|++++.++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 11111000 001112334566678899999999999999999999999998754
No 38
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.3e-39 Score=368.19 Aligned_cols=255 Identities=29% Similarity=0.429 Sum_probs=206.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
+.+.+.||+|+||.||+|++. +++.||||+++... ......+.+|+++|++++||||+++++++...+..++||||++
T Consensus 116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 195 (377)
T 3cbl_A 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 195 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence 345789999999999999987 78999999987543 2334578899999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 758 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 758 (927)
+|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 196 ~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 196 GGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp TCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999999853 234689999999999999999999998 9999999999999999999999999999754332111
Q ss_pred ee-eeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 759 VS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 759 ~~-~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.. ....+++.|+|||.+....++.++|||||||++|||++ |+.||...... .+.+.+ ..+..
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~~~~~~----~~~~~-------- 333 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----QTREFV----EKGGR-------- 333 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----HHHHHH----HTTCC--------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCC--------
Confidence 11 12235778999999998999999999999999999998 99999764421 122211 11110
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
...+......+.+++.+|++.+|++|||+.||++.|+++..
T Consensus 334 -~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 334 -LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 01111223468899999999999999999999999998754
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.3e-39 Score=352.29 Aligned_cols=259 Identities=24% Similarity=0.386 Sum_probs=203.6
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.|.+.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 3456789999999999999876 688999999865432 334678899999999999999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 92 YIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp CCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred CCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999843 35689999999999999999999998 9999999999999999999999999999865544
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
.........||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ......... . +.
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-------~~~~~~~~~-~-----~~ 231 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-------IAIKHIQDS-V-----PN 231 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH-------HHHHHHSSC-C-----CC
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHhhcc-C-----CC
Confidence 3333444569999999999999999999999999999999999999997644111 111111111 1 01
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCC-cHHHHHHHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIV 878 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RP-sm~eV~~~L~~~~~ 878 (927)
............+.+++.+|++.+|++|| ++.++.+.|+.++.
T Consensus 232 ~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 11111222335688999999999999999 99999999987653
No 40
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.2e-39 Score=353.83 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=209.7
Q ss_pred HHHHhccccccCceEEEEEEEC------CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
.+.+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 103 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLL 103 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEE
Confidence 3456789999999999999862 45789999997543 3345678999999999999999999999999999999
Q ss_pred EEEeccCCchhhhcccccc--------------------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCC
Q 002409 673 VYEFMHNGTLKEHLYGTLT--------------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 732 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~--------------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~N 732 (927)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~N 180 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARN 180 (314)
T ss_dssp EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchhe
Confidence 9999999999999965322 224589999999999999999999998 99999999999
Q ss_pred eEECCCCcEEEEeecCcccccCCCCce-eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCccccccccc
Q 002409 733 ILLDKHMRAKVSDFGLSKFAVDGASHV-SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGA 810 (927)
Q Consensus 733 ILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~ 810 (927)
||++.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 259 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE- 259 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 999999999999999998654433222 233457889999999999899999999999999999999 99999765422
Q ss_pred ccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 811 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 811 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.+...... +.. ...+......+.+++.+|++.+|++||++.||+++|++++..
T Consensus 260 ---~~~~~~~~----~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 260 ---RLFNLLKT----GHR---------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ---GHHHHHHT----TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---HHHHHhhc----CCc---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 22222111 110 011122234688999999999999999999999999998753
No 41
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.8e-39 Score=362.02 Aligned_cols=263 Identities=27% Similarity=0.409 Sum_probs=207.9
Q ss_pred HHHHHHhccccccCceEEEEEEEC------CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhc-cCCCccceecceeecC-
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG- 668 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~- 668 (927)
...+.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 344556789999999999999742 457899999976533 3346799999999999 8999999999988755
Q ss_pred eEEEEEEeccCCchhhhccccccc--------------------------------------------------------
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLTH-------------------------------------------------------- 692 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~~-------------------------------------------------------- 692 (927)
..++||||+++|+|.+++......
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 489999999999999999654221
Q ss_pred ------ccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC-ceeeeecc
Q 002409 693 ------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRG 765 (927)
Q Consensus 693 ------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~g 765 (927)
...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .......|
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 12288999999999999999999998 999999999999999999999999999986544322 23344568
Q ss_pred CCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccCccCHHH
Q 002409 766 TVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQS 844 (927)
Q Consensus 766 t~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 844 (927)
|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .+... ...+... . .+...
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~----~~~~~~~-----~----~~~~~ 321 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFCRR----LKEGTRM-----R----APDYT 321 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HHHHH----HHHTCCC-----C----CCTTC
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH---HHHHH----HHcCCCC-----C----CCCCC
Confidence 999999999999999999999999999999998 999997654221 11111 1111110 0 11112
Q ss_pred HHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 845 MWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 845 ~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
..++.+++.+|++.+|++|||+.||+++|++++..
T Consensus 322 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 24688999999999999999999999999998754
No 42
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.5e-38 Score=355.66 Aligned_cols=245 Identities=23% Similarity=0.321 Sum_probs=201.7
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.||+|+||.||+++.+ +++.||+|+++... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~ 87 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 45688999999999999886 68999999997542 233456889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 88 ~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 159 (337)
T 1o6l_A 88 NGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp TTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred CCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence 9999999884 345689999999999999999999998 99999999999999999999999999998533222
Q ss_pred ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCccc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 837 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 837 (927)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+.+. .+.+ .
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~----~~~~------~-- 223 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFELIL----MEEI------R-- 223 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HCCC------C--
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH----HHHHHHH----cCCC------C--
Confidence 2234456999999999999999999999999999999999999999754422 1111111 1111 0
Q ss_pred CccCHHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHHH
Q 002409 838 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 872 (927)
Q Consensus 838 ~~~~~~~~~~l~~L~~~Cl~~dP~~RP-----sm~eV~~~ 872 (927)
++......+.+++.+|++.+|++|| ++.||++|
T Consensus 224 --~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 224 --FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1112234688999999999999999 89999887
No 43
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.3e-38 Score=359.46 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=202.7
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch------hhHhHHHHHHHHhhccCCCccceecceeecCeEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 673 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~------~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV 673 (927)
|.+.+.||+|+||.||+++.. +|+.||+|++...... ....+.+|+.+|++++||||+++++++.+.+..++|
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence 456789999999999999886 6899999999765322 246789999999999999999999999999999999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC----cEEEEeecCc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFGLS 749 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~----~vkL~DFGla 749 (927)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++ .+||+|||++
T Consensus 94 ~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 94 LELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999843 45689999999999999999999998 999999999999998877 7999999999
Q ss_pred ccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 750 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 750 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
+...... ......||+.|+|||++....++.++|||||||++|||++|+.||......+ +...+ ..+...
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~----~~~~i----~~~~~~ 236 (361)
T 2yab_A 167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI----TAVSYD 236 (361)
T ss_dssp EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHH----HTTCCC
T ss_pred eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHH----HhcCCC
Confidence 8654432 2234569999999999998899999999999999999999999997654221 11111 111100
Q ss_pred cccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 830 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 830 ~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+++.... .....+.+++.+|+..||++|||+.|+++|
T Consensus 237 --~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 237 --FDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp --CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --CCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111 122457899999999999999999999875
No 44
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=352.75 Aligned_cols=251 Identities=24% Similarity=0.325 Sum_probs=203.6
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch------hhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~------~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
..|.+.+.||+|+||.||+++.. +++.||+|++...... ....+.+|+.++++++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45667889999999999999886 6889999999754322 3567899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC----cEEEEeec
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 747 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~----~vkL~DFG 747 (927)
+||||+++|+|.+++.. ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999843 45689999999999999999999998 999999999999999887 89999999
Q ss_pred CcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 748 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 748 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
+++...... ......||+.|+|||++....++.++|||||||++|||++|+.||......+ ....... ..
T Consensus 164 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~~~~----~~ 233 (326)
T 2y0a_A 164 LAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVSA----VN 233 (326)
T ss_dssp TCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHHH----TC
T ss_pred CCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHHHHHh----cC
Confidence 998654322 2233569999999999998999999999999999999999999997544211 1111110 00
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. .............+.+++.+|++.+|++|||+.|++++
T Consensus 234 ~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 Y------EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp C------CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred C------CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00000001122467899999999999999999999986
No 45
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.4e-38 Score=348.82 Aligned_cols=257 Identities=22% Similarity=0.363 Sum_probs=197.6
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhh--ccCCCccceecceee----cCeEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQE----EGRSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~g~~~~----~~~~~lV~ 674 (927)
+.+.+.||+|+||.||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++.. ....++||
T Consensus 10 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 45678999999999999998 4899999998643 23455666666666 799999999998754 34579999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHh--------hCCCCceecCCCCCCCeEECCCCcEEEEee
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSDF 746 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDLkp~NILl~~~~~vkL~DF 746 (927)
||+++|+|.+++. ...+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 86 e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 86 HYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp CCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999984 346899999999999999999999 66 9999999999999999999999999
Q ss_pred cCcccccCCCCce---eeeeccCCCccCccccccC------cCCCccceeeHHHHHHHHHhC----------CCcccccc
Q 002409 747 GLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEK 807 (927)
Q Consensus 747 Gla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwSlGvvL~elltG----------~~p~~~~~ 807 (927)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997655443322 2234699999999999876 556789999999999999999 77775433
Q ss_pred cccccchhhHHHHhhhccCCcccccCCccc-CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 808 FGANCRNIVQWAKLHIESGDIQGIIDPSLL-DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 808 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
..... ...........+. .+.+. ..........+.+++.+|++.+|++|||+.||++.|+++
T Consensus 238 ~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPS--FEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCC--HHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcc--hhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 21111 1111111111111 11111 112334567899999999999999999999999999975
No 46
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2e-38 Score=350.62 Aligned_cols=264 Identities=21% Similarity=0.256 Sum_probs=199.7
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
|.+.+.||+|+||+||+|+..+++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 102 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC
Confidence 445689999999999999998899999999875432 224678899999999999999999999999999999999998
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 758 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 758 (927)
+ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 103 ~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 103 K-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp E-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred C-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 5 787777532 34589999999999999999999998 999999999999999999999999999986543322
Q ss_pred eeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccC-----------
Q 002409 759 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG----------- 826 (927)
Q Consensus 759 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~----------- 826 (927)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+...........
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhh
Confidence 2233458999999999876 5689999999999999999999999976553332222222111100000
Q ss_pred -CcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 827 -DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 827 -~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
......+.............++.+++.+|++.||++|||+.|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000000000111122467899999999999999999999875
No 47
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=365.83 Aligned_cols=262 Identities=25% Similarity=0.427 Sum_probs=211.3
Q ss_pred HHHHHhccccccCceEEEEEEEC--------CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhc-cCCCccceecceeecC
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 668 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~--------~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~ 668 (927)
..+.+.+.||+|+||.||+|+.. .++.||||+++.... .....+.+|+++++++ +||||+++++++...+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 34556789999999999999863 235799999976533 3346789999999999 9999999999999999
Q ss_pred eEEEEEEeccCCchhhhcccccc------------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 736 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~ 736 (927)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEc
Confidence 99999999999999999965421 134689999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCcccccCCCC-ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccch
Q 002409 737 KHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 814 (927)
Q Consensus 737 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~ 814 (927)
.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~----~ 301 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----E 301 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----H
Confidence 999999999999986543322 22233457889999999999999999999999999999999 99999754421 2
Q ss_pred hhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 815 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 815 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
+.+.+.. +... ..+.....++.+++.+|++.+|++||++.||+++|++++...
T Consensus 302 ~~~~~~~----~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 302 LFKLLKE----GHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHT----TCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHc----CCCC---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 2222211 1110 111122346889999999999999999999999999987643
No 48
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.3e-38 Score=358.39 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=204.7
Q ss_pred HHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-----chhhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-----~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
...|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 446677899999999999999876 68999999986431 123567899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc---EEEEeecC
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGL 748 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~---vkL~DFGl 748 (927)
+||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865433344689999999999999999999998 9999999999999987654 99999999
Q ss_pred cccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCc
Q 002409 749 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 828 (927)
Q Consensus 749 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 828 (927)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+...+ ..+..
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~i----~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-----ERLFEGI----IKGKY 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-----HHHHHHH----HHTCC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-----HHHHHHH----HcCCC
Confidence 98654432 22334569999999999999999999999999999999999999997543 1111111 11111
Q ss_pred ccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 829 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 829 ~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. .++.... .....+.+++.+|++.||++|||+.|++++
T Consensus 250 ~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0110011 122468899999999999999999999875
No 49
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.4e-39 Score=350.02 Aligned_cols=257 Identities=21% Similarity=0.334 Sum_probs=196.0
Q ss_pred HHHHhccccccCceEEEEEEECC----CcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~----g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
.+.+.+.||+|+||.||+|++.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. .+..++||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 94 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM 94 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEE
Confidence 45567899999999999998753 4569999987543 334567899999999999999999999985 45688999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 95 ELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp ECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999998532 34688999999999999999999998 999999999999999999999999999986654
Q ss_pred CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
..........+|+.|+|||.+....++.++|||||||++|||++ |+.||...... .+...+. .+...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~~~i~----~~~~~---- 236 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIE----NGERL---- 236 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH----TTCCC----
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHHHHHH----cCCCC----
Confidence 33333334457889999999998899999999999999999996 99999765422 2222211 11110
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
..+......+.+++.+|++.+|++||++.|++++|++++..+
T Consensus 237 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 -----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111223346889999999999999999999999999987654
No 50
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.5e-39 Score=372.15 Aligned_cols=254 Identities=23% Similarity=0.387 Sum_probs=206.8
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.+.||+|+||.||+|++++++.||||+++... ...+.+.+|+++|++++||||+++++++. .+..++||||+++
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~ 266 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAK 266 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTT
T ss_pred HeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCC
Confidence 345678999999999999999988999999997654 34678999999999999999999999986 5678999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 267 g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 267 GSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp CBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred CcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 9999999643 234678889999999999999999998 99999999999999999999999999998654322112
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....+|..|+|||++....++.++|||||||++|||++ |+.||...... .+.+.+... ..+
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i~~~---~~~---------- 404 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRALERG---YRM---------- 404 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHHHT---CCC----------
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcC---CCC----------
Confidence 223346789999999998999999999999999999999 99999764422 222221111 010
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
..+......+.+++.+|++.+|++|||+.+|++.|+.+.
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 011223356889999999999999999999999999764
No 51
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=363.80 Aligned_cols=261 Identities=26% Similarity=0.393 Sum_probs=208.4
Q ss_pred HHHHhccccccCceEEEEEEEC------CCcEEEEEEeecC-CchhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
.+.+.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++......++
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 3456789999999999999853 4668999999754 33445678899999999999999999999999999999
Q ss_pred EEEeccCCchhhhccccc---ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC---cEEEEee
Q 002409 673 VYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDF 746 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~---~vkL~DF 746 (927)
||||+++|+|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++ .+||+||
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCC
Confidence 999999999999996532 2234689999999999999999999998 999999999999999555 5999999
Q ss_pred cCcccccCC-CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhc
Q 002409 747 GLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 747 Gla~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
|+++..... .........||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+..
T Consensus 229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~----~~~~~i~~--- 301 (367)
T 3l9p_A 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS--- 301 (367)
T ss_dssp HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHHT---
T ss_pred ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHc---
Confidence 999754222 1122234458999999999999999999999999999999998 99999765421 22222111
Q ss_pred cCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 825 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 825 ~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
+.. ...+......+.+++.+|++.+|++||++.||+++|+.+....
T Consensus 302 -~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 302 -GGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -CCC---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 110 0111122346889999999999999999999999999886544
No 52
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.9e-39 Score=348.32 Aligned_cols=259 Identities=27% Similarity=0.415 Sum_probs=213.6
Q ss_pred HHHHHhccccccCceEEEEEEECC-CcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~~-g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
..+.+.+.||+|+||.||+|++.. ++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 344567899999999999999874 7889999997543 34577899999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 92 TYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp TTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred CCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 999999998543 245689999999999999999999998 999999999999999999999999999986655444
Q ss_pred ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+.+......
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~~~~~~~~~~------------- 229 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLEKDY------------- 229 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHHTTC-------------
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHhccC-------------
Confidence 44444567889999999998999999999999999999999 99999765422 2222211110
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
....+......+.+++.+|++.+|++||++.|+++.|+.++...
T Consensus 230 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01111222346889999999999999999999999999988654
No 53
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.6e-39 Score=358.80 Aligned_cols=265 Identities=25% Similarity=0.363 Sum_probs=208.6
Q ss_pred HHHHhccccccCceEEEEEEE-----CCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceeccee--ecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~-----~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~~~l 672 (927)
.+.+.+.||+|+||.||++++ .+++.||||++........+.+.+|++++++++||||+++++++. +....++
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 103 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL 103 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence 445678999999999999985 367899999998776666678999999999999999999999886 4567899
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 104 VMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999998532 34689999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCc--eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccccc--------ccchhhHHHHhh
Q 002409 753 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA--------NCRNIVQWAKLH 822 (927)
Q Consensus 753 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~--------~~~~l~~~~~~~ 822 (927)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....... ....
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 256 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR-LLEL 256 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH-HHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH-HHHH
Confidence 443322 1233457888999999998899999999999999999999999986533110 0000011 1111
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
...+ .....+......+.+++.+|++.+|++|||+.|++++|+.+....
T Consensus 257 ~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 257 LEEG---------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred hhcc---------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111 111122333456889999999999999999999999999986543
No 54
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.5e-38 Score=354.03 Aligned_cols=256 Identities=23% Similarity=0.365 Sum_probs=199.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCc----EEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~----~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
+.+.+.||+|+||.||+|++. +++ +||+|.++... ....+.+.+|+.++++++||||++++++|.... .++|+
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEE
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEE
Confidence 456789999999999999865 344 35888775432 344578999999999999999999999998765 78999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+.+|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 96 QLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp ECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999998643 35689999999999999999999998 999999999999999999999999999986544
Q ss_pred CCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 755 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 755 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
.... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...... +.
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~----~~----- 236 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEK----GE----- 236 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHHT----TC-----
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----HHHHHHHc----CC-----
Confidence 3322 2233457889999999999999999999999999999999 99999765422 12221111 11
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
....+......+.+++.+|++.+|++||++.||+++|+.+....
T Consensus 237 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 237 ----RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp ----CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred ----CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 00111223346889999999999999999999999999986543
No 55
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.9e-39 Score=379.35 Aligned_cols=255 Identities=27% Similarity=0.418 Sum_probs=209.6
Q ss_pred HHHhccccccCceEEEEEEECC-CcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~-g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
+.+.+.||+|+||.||+|+++. ++.||||+++.... ..+.|.+|+++|++++||||++++++|...+..++||||+++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~ 300 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence 4567899999999999999874 78999999975533 367799999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 301 g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 301 GNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp CBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 9999999643 235588999999999999999999998 99999999999999999999999999998654432222
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....++..|+|||++....++.++|||||||++|||++ |+.||...... .+.+.+.. +. ..
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~~~~----~~---------~~ 438 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLEK----DY---------RM 438 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHHT----TC---------CC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHc----CC---------CC
Confidence 233446789999999999999999999999999999999 99999765422 22222111 10 11
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
..+......+.+++.+|++.+|++|||+.||++.|+.++.
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1122233568899999999999999999999999998753
No 56
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-38 Score=351.35 Aligned_cols=249 Identities=18% Similarity=0.295 Sum_probs=202.5
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
|.+.+.||+|+||.||+++.. +++.+|+|++.... .....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 85 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG 85 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCC
Confidence 445688999999999999876 57889999987443 3456788999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC--CCcEEEEeecCcccccCCCC
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~--~~~vkL~DFGla~~~~~~~~ 757 (927)
|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++......
T Consensus 86 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 86 LDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999998532 34689999999999999999999998 9999999999999997 7899999999998654432
Q ss_pred ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCccc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 837 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 837 (927)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+.. +... .+....
T Consensus 159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~----~~~~--~~~~~~ 227 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ----QIIENIMN----AEYT--FDEEAF 227 (321)
T ss_dssp -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHH----TCCC--CCHHHH
T ss_pred -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH----HHHHHHHc----CCCC--CChhhh
Confidence 234456999999999999888999999999999999999999999765422 11111111 1100 000001
Q ss_pred CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 838 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 838 ~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. ....++.+++.+|++.||++|||+.|++++
T Consensus 228 ~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 K----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 123468899999999999999999999986
No 57
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=353.84 Aligned_cols=263 Identities=25% Similarity=0.378 Sum_probs=206.6
Q ss_pred HHHHHhccccccCceEEEEEEE------CCCcEEEEEEeecCC-chhhHhHHHHHHHHhhc-cCCCccceecceeecCeE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 670 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~------~~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~ 670 (927)
..+.+.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4455678999999999999986 245689999997542 33456789999999999 899999999999999999
Q ss_pred EEEEEeccCCchhhhccccccc-------------------ccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCC
Q 002409 671 VLVYEFMHNGTLKEHLYGTLTH-------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 731 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~~-------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~ 731 (927)
++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~ 201 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAAR 201 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGG
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChh
Confidence 9999999999999999653211 13478999999999999999999998 9999999999
Q ss_pred CeEECCCCcEEEEeecCcccccCCCC-ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccc
Q 002409 732 NILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 809 (927)
Q Consensus 732 NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~ 809 (927)
|||++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 99999999999999999986544332 22334557889999999999999999999999999999998 99999765422
Q ss_pred cccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 810 ANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 810 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
. .+..... .+.. ...+......+.+++.+|++.+|++||++.||+++|+.++...
T Consensus 282 ~---~~~~~~~----~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 282 A---NFYKLIQ----NGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp H---HHHHHHH----TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred H---HHHHHHh----cCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 1 1111111 1100 0111122346889999999999999999999999999986543
No 58
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.4e-38 Score=343.47 Aligned_cols=251 Identities=30% Similarity=0.431 Sum_probs=191.8
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCc----hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY----QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~----~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+|++. ++.||||+++.... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEEC
T ss_pred eeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEc
Confidence 345688999999999999986 89999999875432 2246788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC--------CCcEEEEeecC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--------HMRAKVSDFGL 748 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~--------~~~vkL~DFGl 748 (927)
+++++|.+++. ...+++..++.++.|++.||+|||++...+|+||||||+|||++. ++.+||+|||+
T Consensus 88 ~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 88 ARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp CTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred CCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999884 346899999999999999999999982222999999999999986 67899999999
Q ss_pred cccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCc
Q 002409 749 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 828 (927)
Q Consensus 749 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 828 (927)
++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ....... ....
T Consensus 163 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~----~~~~ 231 (271)
T 3dtc_A 163 AREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL----AVAYGVA----MNKL 231 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHHH----TSCC
T ss_pred cccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHhhh----cCCC
Confidence 97544322 22346899999999999989999999999999999999999999754311 1111110 0111
Q ss_pred ccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 829 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 829 ~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
....+......+.+++.+|++.+|++|||+.|++++|+++
T Consensus 232 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 --------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0111122334688999999999999999999999999853
No 59
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.3e-38 Score=351.16 Aligned_cols=270 Identities=23% Similarity=0.361 Sum_probs=207.4
Q ss_pred HHhccccccCceEEEEEEEC-----CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeec--CeEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLV 673 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-----~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~--~~~~lV 673 (927)
.+.+.||+|+||.||++++. +++.||||+++... ......+.+|++++++++||||+++++++.+. ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 56789999999999998753 57889999998653 33456789999999999999999999999874 678999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccccc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~ 753 (927)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp ECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999843 3488999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCCc--eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 754 DGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 754 ~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
..... ......||..|+|||.+.+..++.++|||||||++|||++|+.||........ ....+.........+.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL--ELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh--hhhcccccchhHHHHHHH
Confidence 43322 22334578889999999998999999999999999999999999875431100 000000000000000111
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 881 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~~ 881 (927)
++.......+......+.+++.+|++.+|++|||+.|+++.|+++....+
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 11111112222334578999999999999999999999999999876543
No 60
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.8e-38 Score=345.05 Aligned_cols=263 Identities=21% Similarity=0.292 Sum_probs=197.5
Q ss_pred HHhccccccCceEEEEEEECCCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 602 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.||+|+||.||+|+..+++.||+|++..... .....+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (288)
T 1ob3_A 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred hhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence 45678999999999999998899999999875432 2246788999999999999999999999999999999999975
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 85 -~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 85 -DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp -EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred -CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 888887532 35688999999999999999999998 99999999999999999999999999997654322 12
Q ss_pred eeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccC--Cc--ccccCC
Q 002409 760 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG--DI--QGIIDP 834 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~--~~--~~~~d~ 834 (927)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.+......... .. ....++
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence 233458999999999976 4589999999999999999999999976542222112211110000000 00 000111
Q ss_pred ccc-------CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLL-------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~-------~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... ..+.......+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 110 11111233467899999999999999999999875
No 61
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=358.89 Aligned_cols=246 Identities=25% Similarity=0.352 Sum_probs=197.7
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..+++++ +||||+++++++.+.+..++|||
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E 104 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVME 104 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEe
Confidence 456789999999999999876 58899999997542 22345678899999988 79999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 105 FVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999998843 45689999999999999999999998 9999999999999999999999999999753322
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. +..
T Consensus 178 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--------~~~------- 241 (353)
T 3txo_A 178 -GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN--------DEV------- 241 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--------CCC-------
T ss_pred -CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHc--------CCC-------
Confidence 2233445799999999999999999999999999999999999999976542222211111 111
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcH------HHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm------~eV~~~ 872 (927)
.++......+.+++.+|++.+|++||++ .|+++|
T Consensus 242 ---~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 242 ---VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred ---CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 1111122457899999999999999998 778775
No 62
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.9e-38 Score=350.98 Aligned_cols=259 Identities=18% Similarity=0.204 Sum_probs=206.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 345688999999999999874 68899999987543 235688999999999 9999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc-----EEEEeecCccccc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAV 753 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~-----vkL~DFGla~~~~ 753 (927)
+++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++...
T Consensus 88 ~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999998542 45789999999999999999999998 9999999999999999887 9999999998654
Q ss_pred CCCCc------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 754 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 754 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~-~~~~~i~~~~~~~~ 240 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK-ERYQKIGDTKRATP 240 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH-HHHHHHHHHHHHSC
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH-HHHHHHHhhhccCC
Confidence 43221 123456999999999999999999999999999999999999999865422211 11111111100000
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
. ........ ++.+++..|++.+|++||++.+|.+.|+++...
T Consensus 241 ~---------~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 241 I---------EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp H---------HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H---------HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0 00001112 789999999999999999999999999987654
No 63
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=345.55 Aligned_cols=247 Identities=25% Similarity=0.341 Sum_probs=193.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch--------------------------hhHhHHHHHHHHhhcc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------------------------GKREFTNEVTLLSRIH 653 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~--------------------------~~~~~~~Ei~iL~~l~ 653 (927)
|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 446789999999999999876 6889999998754211 1356889999999999
Q ss_pred CCCccceecceee--cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCC
Q 002409 654 HRNLVQFLGYCQE--EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 731 (927)
Q Consensus 654 HpnIv~l~g~~~~--~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~ 731 (927)
||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 9999999999986 568899999999999988653 34689999999999999999999998 9999999999
Q ss_pred CeEECCCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCc---CCCccceeeHHHHHHHHHhCCCccccccc
Q 002409 732 NILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKF 808 (927)
Q Consensus 732 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwSlGvvL~elltG~~p~~~~~~ 808 (927)
|||++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999986544322 233456999999999997654 47789999999999999999999975431
Q ss_pred ccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 809 GANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 809 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. .+... +....... .... .....+.+++.+|++.||++||++.|++++
T Consensus 246 ~----~~~~~----~~~~~~~~----~~~~----~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 M----CLHSK----IKSQALEF----PDQP----DIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp H----HHHHH----HHHCCCCC----CSSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred H----HHHHH----HhcccCCC----CCcc----ccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1 11111 11111100 0011 122468899999999999999999999865
No 64
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.6e-38 Score=350.86 Aligned_cols=261 Identities=24% Similarity=0.377 Sum_probs=194.9
Q ss_pred HHHHHhccccccCceEEEEEEECCCc----EEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceeecCeE--
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLKDGK----EIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS-- 670 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~~g~----~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~-- 670 (927)
..+.+.+.||+|+||.||+|++.... .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 34566789999999999999876432 7999998754 334467799999999999999999999999877655
Q ss_pred ----EEEEEeccCCchhhhcccccc--cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEE
Q 002409 671 ----VLVYEFMHNGTLKEHLYGTLT--HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 744 (927)
Q Consensus 671 ----~lV~E~~~~gsL~~~L~~~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~ 744 (927)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEEC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEe
Confidence 999999999999999854321 122589999999999999999999998 99999999999999999999999
Q ss_pred eecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhh
Q 002409 745 DFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 745 DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+ +......
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~~~~~- 254 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----IYNYLIG- 254 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHHHT-
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----HHHHHhc-
Confidence 99999865433221 2223447889999999999999999999999999999999 999997654221 1111111
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
+.. ...+......+.+++.+|++.+|++|||+.|+++.|++++..
T Consensus 255 ---~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 255 ---GNR---------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp ---TCC---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---CCC---------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 110 011122334688999999999999999999999999998763
No 65
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.8e-38 Score=350.00 Aligned_cols=260 Identities=25% Similarity=0.385 Sum_probs=209.3
Q ss_pred HHHHhccccccCceEEEEEEE------CCCcEEEEEEeecCCc-hhhHhHHHHHHHHhhc-cCCCccceecceeecCeEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~------~~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~ 671 (927)
.+.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++...+..+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 103 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence 445678999999999999985 2467899999975543 3456789999999999 9999999999999999999
Q ss_pred EEEEeccCCchhhhcccccc--------------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC
Q 002409 672 LVYEFMHNGTLKEHLYGTLT--------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 737 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~ 737 (927)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 180 (313)
T 1t46_A 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTH 180 (313)
T ss_dssp EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEET
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcC
Confidence 99999999999999864321 123589999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchh
Q 002409 738 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 815 (927)
Q Consensus 738 ~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l 815 (927)
++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |+.||........ +
T Consensus 181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~ 257 (313)
T 1t46_A 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK---F 257 (313)
T ss_dssp TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH---H
T ss_pred CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH---H
Confidence 999999999999865544322 2233457889999999999999999999999999999999 9999976542211 1
Q ss_pred hHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 816 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 816 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
......... . ..+......+.+++.+|++.+|++|||+.|++++|++++.
T Consensus 258 ~~~~~~~~~---------~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 258 YKMIKEGFR---------M----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHHTCC---------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhccCCC---------C----CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111111100 0 0111223468899999999999999999999999999875
No 66
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=355.90 Aligned_cols=259 Identities=25% Similarity=0.431 Sum_probs=208.0
Q ss_pred HHHHhccccccCceEEEEEEEC------CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
.+.+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 127 (343)
T 1luf_A 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 127 (343)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEE
Confidence 3456788999999999999875 34789999997653 3345679999999999999999999999999999999
Q ss_pred EEEeccCCchhhhccccccc--------------------ccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCC
Q 002409 673 VYEFMHNGTLKEHLYGTLTH--------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 732 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~--------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~N 732 (927)
||||+++|+|.+++...... ...+++..++.++.|++.||.|||++ +|+||||||+|
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~N 204 (343)
T 1luf_A 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN 204 (343)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcce
Confidence 99999999999998653211 25689999999999999999999998 99999999999
Q ss_pred eEECCCCcEEEEeecCcccccCCCC-ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCccccccccc
Q 002409 733 ILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGA 810 (927)
Q Consensus 733 ILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~ 810 (927)
||++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 283 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE- 283 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-
Confidence 9999999999999999975433221 12233457899999999998899999999999999999999 99999754411
Q ss_pred ccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 811 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 811 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
.+... +..+.... .+......+.+++.+|++.+|++||++.||+++|+++..
T Consensus 284 ---~~~~~----~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 284 ---EVIYY----VRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp ---HHHHH----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ---HHHHH----HhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 12221 11222111 111223468899999999999999999999999998864
No 67
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-38 Score=352.60 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=199.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 345688999999999999877 788999999865432 334678899999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC-C
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-S 757 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~-~ 757 (927)
+|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 89 ~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 89 GGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999884 345689999999999999999999998 99999999999999999999999999997543322 1
Q ss_pred ceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ......|..... . ..+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~~---~----~~~-- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKEKKT---Y----LNP-- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT--SHHHHHHHTTCT---T----STT--
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHhcccc---c----CCc--
Confidence 22234569999999999987765 77899999999999999999999754411 111222211110 0 000
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.......+.+++.+|++.+|++|||+.|++++
T Consensus 231 ----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 ----WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01123467899999999999999999999876
No 68
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.9e-38 Score=341.80 Aligned_cols=256 Identities=25% Similarity=0.405 Sum_probs=207.7
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.+.||+|+||.||+|+..+++.||||++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~ 91 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMEN 91 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCC
Confidence 345678999999999999999888899999987543 335678999999999999999999999864 458999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 92 ~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 92 GSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp CBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 9999998542 234689999999999999999999998 99999999999999999999999999998665433222
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....++..|+|||.+....++.++|||||||++|||++ |+.||...... .+.+... .+.. .
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~~----~~~~-----~---- 229 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLE----RGYR-----M---- 229 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHH----TTCC-----C----
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH----HHHHHHh----cccC-----C----
Confidence 333457889999999998889999999999999999999 99999754421 1222111 1100 0
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
..+......+.+++.+|++.+|++|||+.|+++.|+++...
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 01112234688999999999999999999999999998754
No 69
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-38 Score=341.74 Aligned_cols=254 Identities=28% Similarity=0.446 Sum_probs=207.4
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 680 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~g 680 (927)
+.+.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence 345688999999999999998889999999976543 3467899999999999999999999999999999999999999
Q ss_pred chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCcee
Q 002409 681 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 760 (927)
Q Consensus 681 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 760 (927)
+|.+++... ...+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..........
T Consensus 89 ~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 89 CLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp BHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred cHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999998542 34688999999999999999999998 999999999999999999999999999976533221222
Q ss_pred eeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 761 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 761 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
....++..|+|||.+....++.++||||||+++|||++ |+.||...... .+..... .+.. . .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~i~----~~~~-----~----~ 225 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDIS----TGFR-----L----Y 225 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHHH----TTCC-----C----C
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH----HHHHHHh----cCCc-----C----C
Confidence 23447788999999998899999999999999999999 89999764421 1222111 1100 0 0
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
.+......+.+++.+|++.+|++||++.|++++|+++..
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011123468899999999999999999999999998864
No 70
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=363.51 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=202.3
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
..|.+.+.||+|+||.||++... +++.+|+|++..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 45667889999999999999875 688999999975532 334568899999999999999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC---CCCcEEEEeecCcccc
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFA 752 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~---~~~~vkL~DFGla~~~ 752 (927)
|+++|+|.+.+.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+++..
T Consensus 91 ~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 91 LVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred eCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999998853 45689999999999999999999998 999999999999998 4678999999999765
Q ss_pred cCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .+.+.+. .+... .
T Consensus 164 ~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~----~~~~~i~----~~~~~--~ 232 (444)
T 3soa_A 164 EGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH----RLYQQIK----AGAYD--F 232 (444)
T ss_dssp CTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHH----HTCCC--C
T ss_pred cCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH----HHHHHHH----hCCCC--C
Confidence 44322 223456999999999999989999999999999999999999999765421 1222111 11110 0
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...... .....+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~----~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSPEWD----TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTTTTT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred Cccccc----cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000011 123468899999999999999999999986
No 71
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.9e-38 Score=354.54 Aligned_cols=252 Identities=24% Similarity=0.346 Sum_probs=203.4
Q ss_pred HHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
...|.+.+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 345667889999999999999876 68899999997543 233467889999999999999999999999999999999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC---CcEEEEeecCccc
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKF 751 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~---~~vkL~DFGla~~ 751 (927)
||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 108 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999998843 45689999999999999999999998 99999999999999865 4599999999986
Q ss_pred ccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+. .+...
T Consensus 181 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~----~~~~~i~----~~~~~-- 248 (362)
T 2bdw_A 181 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQIK----AGAYD-- 248 (362)
T ss_dssp CTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HTCCC--
T ss_pred ecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHH----hCCCC--
Confidence 54332 223456999999999999989999999999999999999999999764421 1222111 11110
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
....... .....+.+++.+|++.||++||++.|++++
T Consensus 249 ~~~~~~~----~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 YPSPEWD----TVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCTTGGG----GSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCccccc----CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000011 123468899999999999999999999876
No 72
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7e-38 Score=364.38 Aligned_cols=249 Identities=28% Similarity=0.428 Sum_probs=203.4
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecC-eEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-RSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~-~~~lV~E~~~~ 679 (927)
+.+.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|+++|++++||||+++++++.... ..++||||+++
T Consensus 195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~ 271 (450)
T 1k9a_A 195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 271 (450)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence 345688999999999999987 7899999997543 4567999999999999999999999987665 78999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 272 g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 342 (450)
T 1k9a_A 272 GSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 342 (450)
T ss_dssp CBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence 9999999643 223478899999999999999999998 9999999999999999999999999999854321
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....++..|+|||.+....++.++|||||||++|||++ |+.||...... .+...+ ..+.. .
T Consensus 343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i----~~~~~---------~ 405 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPRV----EKGYK---------M 405 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----THHHHH----HTTCC---------C
T ss_pred ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCC---------C
Confidence 122357889999999999999999999999999999998 99999765422 122211 11110 1
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
..+......+.+++.+|++.+|++|||+.||++.|+.+..
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1122234578899999999999999999999999998764
No 73
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=354.69 Aligned_cols=247 Identities=25% Similarity=0.372 Sum_probs=197.2
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCCch
Q 002409 604 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 682 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 682 (927)
.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 457999999999999875 6899999999876656677899999999999999999999999999999999999999999
Q ss_pred hhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE--CCCCcEEEEeecCcccccCCCCcee
Q 002409 683 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL--DKHMRAKVSDFGLSKFAVDGASHVS 760 (927)
Q Consensus 683 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl--~~~~~vkL~DFGla~~~~~~~~~~~ 760 (927)
.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...... ..
T Consensus 174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~ 245 (373)
T 2x4f_A 174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KL 245 (373)
T ss_dssp HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BC
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cc
Confidence 998853 235689999999999999999999998 99999999999999 567899999999998654432 22
Q ss_pred eeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCcc
Q 002409 761 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 840 (927)
Q Consensus 761 ~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 840 (927)
....||+.|+|||++....++.++|||||||++|||++|+.||......+....+.. ... . +.......
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~---~~~---~----~~~~~~~~- 314 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA---CRW---D----LEDEEFQD- 314 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TCC---C----SCSGGGTT-
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---ccC---C----CChhhhcc-
Confidence 334599999999999988999999999999999999999999976542211111111 100 0 00111111
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 841 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 841 ~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
....+.+++.+|++.+|++||++.|++++
T Consensus 315 ---~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 315 ---ISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp ---SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---CCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 22468899999999999999999999985
No 74
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.2e-39 Score=351.07 Aligned_cols=264 Identities=25% Similarity=0.381 Sum_probs=204.8
Q ss_pred HHHHHhccccccCceEEEEEEE-----CCCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeec--CeE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRS 670 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~-----~~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~--~~~ 670 (927)
..+.+.+.||+|+||.||+|++ .+++.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3355678999999999999984 368899999997543 23356789999999999999999999999876 668
Q ss_pred EEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 671 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 101 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 9999999999999998532 34589999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCc--eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccc-------ccccchhhHHHHh
Q 002409 751 FAVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF-------GANCRNIVQWAKL 821 (927)
Q Consensus 751 ~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~-------~~~~~~l~~~~~~ 821 (927)
........ ......||..|+|||.+.+..++.++|||||||++|||++|+.|+..... +............
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 65543321 22334588889999999999999999999999999999999998753210 0000000111111
Q ss_pred hhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 822 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 822 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
....+. ....+......+.+++.+|++.+|++|||+.|+++.|++++
T Consensus 255 ~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGK---------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccC---------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 11112223356889999999999999999999999999875
No 75
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.2e-38 Score=346.20 Aligned_cols=267 Identities=22% Similarity=0.286 Sum_probs=191.6
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4566789999999999999876 688999999975532 23467889999999999999999999999999999999999
Q ss_pred cCCchhhhccccc--ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 678 HNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 678 ~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
+ |+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 8 59998885432 1224588999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccc----
Q 002409 756 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG---- 830 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~---- 830 (927)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.+...... ......
T Consensus 162 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 239 (317)
T 2pmi_A 162 VN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN-ESLWPSVTKL 239 (317)
T ss_dssp CC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC-TTTCGGGGGC
T ss_pred cc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC-hhHhhhhhhh
Confidence 22 2233468999999999976 4689999999999999999999999976542222222221110000 000000
Q ss_pred -ccCCcc------------cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 831 -IIDPSL------------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 831 -~~d~~l------------~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...+.+ ...........+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000 000011123468899999999999999999999876
No 76
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.3e-38 Score=352.16 Aligned_cols=256 Identities=23% Similarity=0.386 Sum_probs=200.8
Q ss_pred HHHhccccccCceEEEEEEEC-CCcE----EEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~----VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
+.+.+.||+|+||.||+|++. +++. ||+|++.... ......+.+|+.++++++||||+++++++. .+..++||
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~ 93 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVT 93 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEE
Confidence 345688999999999999875 3443 7888875442 333456788999999999999999999986 45688999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+.+|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 94 QYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp ECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999998543 35688899999999999999999998 999999999999999999999999999986644
Q ss_pred CCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 755 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 755 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
.... ......||..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+..... .+...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~----~~~~~--- 236 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPDLLE----KGERL--- 236 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHHHHH----TTCBC---
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHHHHH----cCCCC---
Confidence 3322 2344568889999999999999999999999999999999 99999765422 1222111 11100
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
..+......+.+++.+|++.+|++||++.|++++|+.+....
T Consensus 237 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 237 ------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 001111224778999999999999999999999999886543
No 77
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-38 Score=355.85 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=205.0
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
.|.+.+.||+|+||.||+|... +++.||+|++..........+.+|+++|++++||||+++++++.+....++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 3556789999999999999886 688999999987655556789999999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC--CCcEEEEeecCcccccCCC
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~--~~~vkL~DFGla~~~~~~~ 756 (927)
+|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++......
T Consensus 132 gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 132 GGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999988532 34689999999999999999999998 9999999999999974 4789999999998654432
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. +.. ..++..
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~i~~----~~~--~~~~~~ 273 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----ETLQNVKR----CDW--EFDEDA 273 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHHH----CCC--CCCSST
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH----HHHHHHHh----CCC--CCCccc
Confidence 233456999999999999999999999999999999999999999764421 11111111 110 011111
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. .....+.+++.+|++.||++|||+.|++++
T Consensus 274 ~~----~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FS----SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cc----cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11 123468899999999999999999999986
No 78
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.6e-38 Score=364.38 Aligned_cols=252 Identities=22% Similarity=0.287 Sum_probs=204.6
Q ss_pred HHhccccccCceEEEEEEECC-CcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 602 MLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~~-g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.++||+|+||+||+|+++. ++.||||++++... .....+.+|..++.+++||||+++++++.+.+..++||||+
T Consensus 77 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~ 156 (437)
T 4aw2_A 77 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 156 (437)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecC
Confidence 346789999999999999874 78899999975321 22344889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 157 ~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 157 VGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 999999999542 45689999999999999999999998 999999999999999999999999999986655444
Q ss_pred ceeeeeccCCCccCccccc-----cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 758 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+... -.+..
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~----~~~p~-- 304 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER----FQFPT-- 304 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH----CCCCS--
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc----ccCCc--
Confidence 4445567999999999997 567899999999999999999999999865533333333332111 01111
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 872 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~--RPsm~eV~~~ 872 (927)
.... ....+.+++.+|+..+|++ ||++.|+++|
T Consensus 305 ---~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 305 ---QVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---SCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---cccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0011 2235789999999988888 9999999987
No 79
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.8e-38 Score=349.04 Aligned_cols=250 Identities=23% Similarity=0.318 Sum_probs=196.3
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecC---------
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--------- 668 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~--------- 668 (927)
.+.+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 3456789999999999999987 78999999997543 334577999999999999999999999886543
Q ss_pred ------------------------------------------------eEEEEEEeccCCchhhhcccccccccccCHHH
Q 002409 669 ------------------------------------------------RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIK 700 (927)
Q Consensus 669 ------------------------------------------------~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~ 700 (927)
..++||||+++|+|.+++.... ......+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~ 165 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHGV 165 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhHH
Confidence 3799999999999999996543 334457778
Q ss_pred HHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC-----------ceeeeeccCCCc
Q 002409 701 RLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-----------HVSSIVRGTVGY 769 (927)
Q Consensus 701 ~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~-----------~~~~~~~gt~~Y 769 (927)
++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 899999999999999998 999999999999999999999999999986544321 112334699999
Q ss_pred cCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHH
Q 002409 770 LDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIE 849 (927)
Q Consensus 770 ~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 849 (927)
+|||++.+..++.++|||||||++|||++|..|+.... .+... ...+... .........+.
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~------~~~~~----~~~~~~~---------~~~~~~~~~~~ 303 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV------RIITD----VRNLKFP---------LLFTQKYPQEH 303 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH------HHHHH----HHTTCCC---------HHHHHHCHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH------HHHHH----hhccCCC---------cccccCChhHH
Confidence 99999999999999999999999999999977653221 11111 1111110 11122334678
Q ss_pred HHHhhhcCCCCCCCCcHHHHHHH
Q 002409 850 EKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 850 ~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+++.+|++.+|++||++.|++++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999999875
No 80
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.1e-37 Score=341.02 Aligned_cols=263 Identities=20% Similarity=0.258 Sum_probs=196.7
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
.+.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC
Confidence 45688999999999999886 588999999975432 234678899999999999999999999999999999999997
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 758 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 758 (927)
+ +|.+.+.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 85 ~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 156 (292)
T 3o0g_A 85 Q-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp E-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred C-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence 6 55555532 245689999999999999999999998 99999999999999999999999999998654332 2
Q ss_pred eeeeeccCCCccCccccccCc-CCCccceeeHHHHHHHHHhCCCcccccc-cccccchhhHHHHhhhccC--CcccccC-
Q 002409 759 VSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEK-FGANCRNIVQWAKLHIESG--DIQGIID- 833 (927)
Q Consensus 759 ~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvvL~elltG~~p~~~~~-~~~~~~~l~~~~~~~~~~~--~~~~~~d- 833 (927)
......||+.|+|||++.+.. ++.++|||||||++|||++|+.|+.... ..+....+.+.......+. ......+
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence 223446899999999998765 7999999999999999999988864322 1111111111100000000 0000000
Q ss_pred --------CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 834 --------PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 834 --------~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..............+.+++.+|++.||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000001112233567899999999999999999999875
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.9e-38 Score=348.82 Aligned_cols=263 Identities=31% Similarity=0.500 Sum_probs=202.0
Q ss_pred HHHHHHHHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 595 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 595 ei~~~~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
++....+.+.+.||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 344445667889999999999999875 468999887543 3345678999999999999999999998754 55789
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 109 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred EEecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 9999999999999853 245689999999999999999999998 9999999999999999999999999999754
Q ss_pred cCC-CCceeeeeccCCCccCccccc---cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCc
Q 002409 753 VDG-ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 828 (927)
Q Consensus 753 ~~~-~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 828 (927)
... .........||+.|+|||++. ...++.++|||||||++|||++|+.||......+ .+............+
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---~~~~~~~~~~~~~~~ 259 (307)
T 3lb7_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFMVGRGYASPDL 259 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHHTCCCCCS
T ss_pred ccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH---HHHHHHhcCCCCcch
Confidence 321 122233456999999999986 5678889999999999999999999997544211 111111111111111
Q ss_pred ccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 829 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 829 ~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
.. + .......+.+++.+|++.+|++||++.||+++|+.+..
T Consensus 260 ~~-----~----~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 260 SK-----L----YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp TT-----S----CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred hh-----h----hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 11 1 11223468899999999999999999999999998753
No 82
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.2e-38 Score=368.77 Aligned_cols=254 Identities=25% Similarity=0.419 Sum_probs=202.1
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.+.||+|+||.||+|+++++..||||+++... ...+.+.+|+++|++++||||+++++++.+ +..++||||+++
T Consensus 185 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~ 262 (452)
T 1fmk_A 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 262 (452)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred HceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcC
Confidence 345678999999999999999988889999997544 335679999999999999999999999876 678999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 263 gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 263 GSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp CBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 9999999542 234588999999999999999999998 99999999999999999999999999998654433222
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....++..|+|||.+....++.++|||||||++|||++ |+.||...... .+.+.+ ..+.. .
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i----~~~~~---------~ 400 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQV----ERGYR---------M 400 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHH----HTTCC---------C
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCC---------C
Confidence 333457889999999999999999999999999999999 99999754421 122211 11110 1
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
..+......+.+++.+|++.+|++|||+.+|++.|+.+.
T Consensus 401 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 111223456889999999999999999999999999875
No 83
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.8e-38 Score=341.64 Aligned_cols=259 Identities=23% Similarity=0.367 Sum_probs=203.9
Q ss_pred HHHhccccccCceEEEEEEECC----CcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~----g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+|++.. +..||||++.... ....+.+.+|+.++++++||||+++++++.+. ..++|||
T Consensus 14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e 92 (281)
T 3cc6_A 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIME 92 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEE
T ss_pred eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEe
Confidence 4457899999999999998652 2359999987653 33457789999999999999999999998654 5689999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 93 LYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp CCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred cCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999998532 34588999999999999999999998 9999999999999999999999999999865543
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
.........+|+.|+|||.+....++.++|||||||++|||++ |+.||...... .+...... +....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~~~~~~----~~~~~---- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIGVLEK----GDRLP---- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHHHHHHH----TCCCC----
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHHHHHhc----CCCCC----
Confidence 3333344457889999999998899999999999999999998 99999754322 12221111 11000
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIEREA 883 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~~~~ 883 (927)
.+......+.+++.+|++.+|++||++.|++++|+++...+.+.
T Consensus 235 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~i 278 (281)
T 3cc6_A 235 -----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI 278 (281)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhhh
Confidence 01112346889999999999999999999999999998776543
No 84
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-37 Score=349.21 Aligned_cols=263 Identities=22% Similarity=0.270 Sum_probs=200.1
Q ss_pred CHHHHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecC-----CchhhHhHHHHHHHHhhccCCCccceeccee
Q 002409 592 TLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-----SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ 665 (927)
Q Consensus 592 ~~~ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~-----~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~ 665 (927)
++.++. ..|.+.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 20 ~~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 20 SLLELQ-KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp CHHHHH-HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhh-hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 334433 44566889999999999999875 6789999998653 2334567899999999999999999999999
Q ss_pred ecCeEEEEEEeccCCchhhhcccccc------------------------------------cccccCHHHHHHHHHHHH
Q 002409 666 EEGRSVLVYEFMHNGTLKEHLYGTLT------------------------------------HEQRINWIKRLEIAEDAA 709 (927)
Q Consensus 666 ~~~~~~lV~E~~~~gsL~~~L~~~~~------------------------------------~~~~l~~~~~~~i~~qia 709 (927)
+.+..++||||+++|+|.+++..... ....+++..++.++.|++
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999852111 122346778889999999
Q ss_pred hHhHHHhhCCCCceecCCCCCCCeEECCCC--cEEEEeecCcccccCCCC---ceeeeeccCCCccCcccccc--CcCCC
Q 002409 710 KGIEYLHTGCVPAIIHRDLKSSNILLDKHM--RAKVSDFGLSKFAVDGAS---HVSSIVRGTVGYLDPEYYIS--QQLTD 782 (927)
Q Consensus 710 ~gL~yLH~~~~~~ivHrDLkp~NILl~~~~--~vkL~DFGla~~~~~~~~---~~~~~~~gt~~Y~aPE~~~~--~~~s~ 782 (927)
.||+|||++ +|+||||||+|||++.++ .+||+|||+++....... .......||+.|+|||.+.. ..++.
T Consensus 179 ~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999998 999999999999998776 899999999985533221 12334569999999999975 67899
Q ss_pred ccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCC
Q 002409 783 KSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHM 862 (927)
Q Consensus 783 ~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~ 862 (927)
++|||||||++|||++|+.||......+....+.. .. .. .. ..........+.+++.+|++.+|++
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~-------~~-~~--~~----~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN-------KK-LC--FE----NPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-------CC-CC--TT----SGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHh-------cc-cc--cC----CcccccCCHHHHHHHHHHcCCChhH
Confidence 99999999999999999999976542211111111 00 00 00 0000112346889999999999999
Q ss_pred CCcHHHHHHH
Q 002409 863 RPSISEVLKD 872 (927)
Q Consensus 863 RPsm~eV~~~ 872 (927)
||++.|++++
T Consensus 322 Rps~~~~l~h 331 (345)
T 3hko_A 322 RFDAMRALQH 331 (345)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhcC
Confidence 9999999875
No 85
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.1e-38 Score=348.92 Aligned_cols=264 Identities=24% Similarity=0.372 Sum_probs=209.6
Q ss_pred HHHHHhccccccCceEEEEEEECC------CcEEEEEEeecCCc-hhhHhHHHHHHHHhhc-cCCCccceecceeecCeE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 670 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~~------g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~ 670 (927)
..+.+.+.||+|+||.||+|+... .+.||+|++..... ...+.+.+|+++++++ +||||+++++++...+..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 344567899999999999998752 24799999976533 3456789999999999 899999999999999999
Q ss_pred EEEEEeccCCchhhhcccccc----------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc
Q 002409 671 VLVYEFMHNGTLKEHLYGTLT----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 740 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~----------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~ 740 (927)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCe
Confidence 999999999999999864321 134578999999999999999999998 9999999999999999999
Q ss_pred EEEEeecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHH
Q 002409 741 AKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQW 818 (927)
Q Consensus 741 vkL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~ 818 (927)
+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||........ +...
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~~~ 279 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK---FYKL 279 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH---HHHH
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH---HHHH
Confidence 999999999865443222 2233457889999999998899999999999999999998 9999975442211 1111
Q ss_pred HHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHHH
Q 002409 819 AKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 881 (927)
Q Consensus 819 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~~ 881 (927)
...... ...+......+.+++.+|++.+|++|||+.||+++|+++....+
T Consensus 280 ~~~~~~-------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 280 VKDGYQ-------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp HHHTCC-------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HhcCCC-------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 111110 00111123468899999999999999999999999999876543
No 86
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=346.01 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=196.3
Q ss_pred CHHHHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhc-cCCCccceecceeec
Q 002409 592 TLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE 667 (927)
Q Consensus 592 ~~~ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~ 667 (927)
...++....+.+.++||+|+||+||+|+.. +++.||||++..... ........|+..+.++ +||||+++++++.+.
T Consensus 50 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~ 129 (311)
T 3p1a_A 50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG 129 (311)
T ss_dssp SSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred CccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC
Confidence 344556667777899999999999999987 789999999865422 2334455566666555 899999999999999
Q ss_pred CeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeec
Q 002409 668 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 747 (927)
Q Consensus 668 ~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFG 747 (927)
+..++||||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred CEEEEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 9999999999 67898887543 35689999999999999999999998 99999999999999999999999999
Q ss_pred CcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 748 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 748 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
+++..... .......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... . | ..+..+.
T Consensus 203 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~------~---~--~~~~~~~ 268 (311)
T 3p1a_A 203 LLVELGTA--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE------G---W--QQLRQGY 268 (311)
T ss_dssp TCEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH------H---H--HHHTTTC
T ss_pred eeeecccC--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc------H---H--HHHhccC
Confidence 98765432 22334559999999998875 78999999999999999999977664322 0 1 0111111
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. ..+.......+.+++.+|++.+|++|||+.|++++
T Consensus 269 ~~--------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 269 LP--------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp CC--------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CC--------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 11 11111223468899999999999999999999874
No 87
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.7e-38 Score=361.45 Aligned_cols=249 Identities=22% Similarity=0.267 Sum_probs=202.2
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.||+|+||.||+|+.+ +++.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~ 151 (410)
T 3v8s_A 72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM 151 (410)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 34578999999999999987 58899999997532 122345889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++|+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 152 ~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 152 PGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999998843 3588999999999999999999998 999999999999999999999999999986654433
Q ss_pred ceeeeeccCCCccCccccccCc----CCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQ----LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
.......||+.|+|||++.... ++.++|||||||++|||++|+.||......+....+..+.... .+..
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----~~p~--- 296 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL----TFPD--- 296 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC----CCCT---
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc----cCCC---
Confidence 3344567999999999998655 8899999999999999999999998655333333333221110 0000
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCC--CCcHHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHM--RPSISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~--RPsm~eV~~~ 872 (927)
.. .....+.+|+.+|++.+|++ ||++.||++|
T Consensus 297 ---~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 ---DN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---TC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00 11236789999999999998 9999999987
No 88
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-38 Score=347.64 Aligned_cols=243 Identities=24% Similarity=0.382 Sum_probs=200.8
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+++.. +|+.||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence 345688999999999999886 68999999997542 12345678899999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 88 IEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 999999999853 35688999999999999999999998 9999999999999999999999999999865332
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. +.+ .
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~--------~~~------~- 221 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN--------AEL------R- 221 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--------CCC------C-
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--------CCC------C-
Confidence 2345699999999999999999999999999999999999999976442211111111 111 0
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RP-----sm~eV~~~ 872 (927)
++.....++.+++.+|++.+|++|| ++.||++|
T Consensus 222 ---~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 222 ---FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1111224688999999999999999 88999876
No 89
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-37 Score=354.99 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=199.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+++.+ +++.||||++++.. ......+..|..++.++ +||||+++++++.+.+..++|||
T Consensus 54 y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E 133 (396)
T 4dc2_A 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence 446789999999999999987 57789999997642 22335578899999887 89999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 134 YVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999998843 45689999999999999999999998 9999999999999999999999999999853322
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccccccc-chhhHHHHhhhccCCcccccCC
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-RNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ....+.....+..+.+
T Consensus 207 -~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 279 (396)
T 4dc2_A 207 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 279 (396)
T ss_dssp -TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------
T ss_pred -CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------
Confidence 22334567999999999999999999999999999999999999999643211110 1111111111111111
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcH------HHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm------~eV~~~ 872 (927)
.++.....++.+++.+|++.||++||++ .||++|
T Consensus 280 ----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 280 ----RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ----CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 1111223467899999999999999985 666665
No 90
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.7e-37 Score=339.64 Aligned_cols=260 Identities=16% Similarity=0.218 Sum_probs=207.1
Q ss_pred HHHhccccccCceEEEEEEE-CCCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~-~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+|+.+++++ +|+|++++++++......++||||+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 45578899999999999986 468999999986442 345688999999999 8999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc-----EEEEeecCccccc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFAV 753 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~-----vkL~DFGla~~~~ 753 (927)
+++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++...
T Consensus 89 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999998542 34589999999999999999999998 9999999999999987776 9999999998655
Q ss_pred CCCCc------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 754 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 754 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....+........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QKYERIGEKKQSTP 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HHHHHHHHHHHHSC
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-HHHHHHHhhccCcc
Confidence 43221 223456999999999999999999999999999999999999999764422111 11111111111011
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
... ........+.+++.+|++.+|++||++.||++.|++++..
T Consensus 242 ~~~---------~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 242 LRE---------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHH---------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHH---------HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 100 0112234688999999999999999999999999998753
No 91
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=339.26 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=205.4
Q ss_pred ccccccCceEEEEEEEC---CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCC
Q 002409 605 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 680 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~---~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~g 680 (927)
+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999864 57789999998653 33456789999999999999999999999 556789999999999
Q ss_pred chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce-
Q 002409 681 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV- 759 (927)
Q Consensus 681 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~- 759 (927)
+|.+++.. ....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 95 ~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 95 PLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 99999853 245689999999999999999999998 99999999999999999999999999998654433222
Q ss_pred -eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCccc
Q 002409 760 -SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 837 (927)
Q Consensus 760 -~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 837 (927)
.....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...+. .+..
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~i~----~~~~--------- 231 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAFIE----QGKR--------- 231 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHHHHHH----TTCC---------
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHHh----cCCc---------
Confidence 122346889999999988889999999999999999998 99999764421 2222211 1111
Q ss_pred CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHHH
Q 002409 838 DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIER 881 (927)
Q Consensus 838 ~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~~ 881 (927)
...+......+.+++.+|++.+|++||++.|++++|+++.....
T Consensus 232 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 232 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 11112233578899999999999999999999999999876443
No 92
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=9.3e-38 Score=336.43 Aligned_cols=249 Identities=21% Similarity=0.309 Sum_probs=200.9
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeec--CeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~--~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+|+++ ++.||||+++... ....+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred hHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 445789999999999999986 8999999997553 33456799999999999999999999999877 788999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCc--eecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
+++|+|.+++... ....+++..++.++.|++.||+|||++ + ++||||||+|||++.++.++|+|||++.....
T Consensus 91 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 91 MPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp CTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999643 233589999999999999999999997 7 99999999999999999999999998753222
Q ss_pred CCCceeeeeccCCCccCccccccCcCCC---ccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTD---KSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~---~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.||......+ ... .....+.
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~---~~~~~~~---- 228 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----IGM---KVALEGL---- 228 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH----HHH---HHHHSCC----
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH----HHH---HHHhcCC----
Confidence 2235899999999998765555 7999999999999999999997544211 111 1111110
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
.+.+ +......+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 229 -~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 229 -RPTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp -CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred -CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1111 1222346889999999999999999999999999863
No 93
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1e-37 Score=348.28 Aligned_cols=262 Identities=24% Similarity=0.430 Sum_probs=209.3
Q ss_pred HHHHHhccccccCceEEEEEEEC--------CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhc-cCCCccceecceeecC
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 668 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~--------~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~ 668 (927)
..+.+.+.||+|+||.||+|++. +++.||||+++.... .....+.+|+++++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 44566789999999999999873 467899999975532 3456788999999999 8999999999999999
Q ss_pred eEEEEEEeccCCchhhhcccccc------------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 736 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~ 736 (927)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 191 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEc
Confidence 99999999999999999965421 123589999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccch
Q 002409 737 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRN 814 (927)
Q Consensus 737 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~ 814 (927)
.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~ 267 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----E 267 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----H
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----H
Confidence 9999999999999865443221 1223457889999999998899999999999999999999 99999754421 2
Q ss_pred hhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 815 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 815 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
+...... +... ..+......+.+++.+|++.+|++||++.||+++|++++...
T Consensus 268 ~~~~~~~----~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 268 LFKLLKE----GHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHHHHHH----TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhc----CCCC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 2221111 1110 111122346889999999999999999999999999998654
No 94
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.9e-38 Score=351.41 Aligned_cols=244 Identities=22% Similarity=0.348 Sum_probs=199.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 445789999999999999974 68899999987532 12245788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+ +|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 91 ~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 91 A-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp C-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred C-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9 7899888843 45689999999999999999999998 99999999999999999999999999998654332
Q ss_pred CceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...........+ ..+.
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--------~~~~-------- 224 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--------NSCV-------- 224 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--------CSSC--------
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--------HcCC--------
Confidence 2234569999999999988776 67999999999999999999999765432221111 0000
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...+......+.+++.+|++.||++|||+.|++++
T Consensus 225 --~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 --YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp --CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred --CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00111123467899999999999999999999886
No 95
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.5e-37 Score=338.57 Aligned_cols=250 Identities=32% Similarity=0.555 Sum_probs=198.5
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchh-------hHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG-------KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~-------~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
+.+.+.||+|+||.||+|++. +++.||||++....... .+.+.+|++++++++||||+++++++.+.. ++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~l 98 (287)
T 4f0f_A 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RM 98 (287)
T ss_dssp EEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EE
T ss_pred ceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eE
Confidence 456788999999999999885 78899999986543221 167889999999999999999999987665 69
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCc--eecCCCCCCCeEECCCCc-----EEEEe
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMR-----AKVSD 745 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLkp~NILl~~~~~-----vkL~D 745 (927)
||||+++|+|.+++.. ....+++..++.++.|++.||+|||++ + |+||||||+|||++.++. +||+|
T Consensus 99 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred EEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 9999999999988854 245689999999999999999999998 7 999999999999988776 99999
Q ss_pred ecCcccccCCCCceeeeeccCCCccCccccc--cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 746 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYI--SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 746 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
||+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||........ .......
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~--- 243 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIR--- 243 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHHHHH---
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHHHHh---
Confidence 999974332 233456999999999983 45678899999999999999999999975442211 1111111
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
..+ . .+ ..+......+.+++.+|++.+|++||++.||++.|+++
T Consensus 244 ~~~-~----~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEG-L----RP----TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSC-C----CC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccC-C----CC----CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111 1 11 11122334688999999999999999999999999863
No 96
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.2e-38 Score=344.05 Aligned_cols=251 Identities=24% Similarity=0.411 Sum_probs=200.4
Q ss_pred HHHHhccccccCceEEEEEEECC-C-------cEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKD-G-------KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~-g-------~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
.+.+.+.||+|+||.||+|+... + +.||+|++........+.+.+|++++++++||||+++++++...+..+
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI 88 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCE
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCE
Confidence 34567899999999999998663 3 479999997666566778999999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc--------EEE
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--------AKV 743 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~--------vkL 743 (927)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++. +||
T Consensus 89 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 89 LVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp EEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred EEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999542 34489999999999999999999998 9999999999999998887 999
Q ss_pred EeecCcccccCCCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhh
Q 002409 744 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 744 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
+|||++..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|..|+...... ........
T Consensus 163 ~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~---~~~~~~~~-- 232 (289)
T 4fvq_A 163 SDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS---QRKLQFYE-- 232 (289)
T ss_dssp CCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHHHHHH--
T ss_pred ccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch---HHHHHHhh--
Confidence 99999864422 123458999999999987 77899999999999999999965544322211 11111111
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
....+.. . ....+.+++.+|++.+|++|||+.|++++|++++..
T Consensus 233 -~~~~~~~--------~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 233 -DRHQLPA--------P----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp -TTCCCCC--------C----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred -ccCCCCC--------C----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1111111 1 122478899999999999999999999999998653
No 97
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.2e-38 Score=354.19 Aligned_cols=246 Identities=25% Similarity=0.395 Sum_probs=200.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..+++++ +||||+++++++.+.+..++|||
T Consensus 19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E 98 (345)
T 1xjd_A 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME 98 (345)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 445789999999999999986 58899999997542 22345677899999887 99999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 99 YLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999999843 35689999999999999999999998 9999999999999999999999999999754322
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+.+. .+. +.
T Consensus 172 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~----~~~------~~ 236 (345)
T 1xjd_A 172 D-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE----ELFHSIR----MDN------PF 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HCC------CC
T ss_pred C-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH----HHHHHHH----hCC------CC
Confidence 2 2234557999999999999999999999999999999999999999765422 1222111 111 01
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHH-HHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSIS-EVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~-eV~~~ 872 (927)
++......+.+++.+|++.+|++||++. ||.+|
T Consensus 237 ----~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 237 ----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp ----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ----CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1111224688999999999999999997 77654
No 98
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.3e-37 Score=341.16 Aligned_cols=263 Identities=24% Similarity=0.372 Sum_probs=199.8
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.|.+.+.||+|+||.||+|+.. +++.||||+++... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 3566789999999999999875 78999999997532 3345678899999999999999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++++|.+++.........+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 9999999999865444456689999999999999999999998 9999999999999999999999999998755432
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
.. ......|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ....... ....+......
T Consensus 190 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~-~~~~~~~~~~~--- 259 (310)
T 2wqm_A 190 TT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCK-KIEQCDYPPLP--- 259 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHH-HHHTTCSCCCC---
T ss_pred Cc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHH-HhhcccCCCCc---
Confidence 22 22334589999999999998999999999999999999999999975431 1111111 11122111111
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
.. .....+.+++.+|++.||++||++.||++.|+++....
T Consensus 260 -~~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 260 -SD----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp -TT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -cc----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 11 12246889999999999999999999999999986543
No 99
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-37 Score=347.36 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=180.3
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-CCCccceecceeecCeEEEEEEeccCCch
Q 002409 605 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 682 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 682 (927)
+.||+|+||.||+|+.. +++.||||++... ....+.+|+.+++++. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 67999999999999886 6889999998643 3466789999999997 99999999999999999999999999999
Q ss_pred hhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC---cEEEEeecCcccccCCCCce
Q 002409 683 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 683 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~---~vkL~DFGla~~~~~~~~~~ 759 (927)
.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++...... ..
T Consensus 94 ~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~ 165 (325)
T 3kn6_A 94 FERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QP 165 (325)
T ss_dssp HHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cc
Confidence 999853 45689999999999999999999998 999999999999998765 89999999998554332 22
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.............+. ...+..+... ....
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~-~~~i~~~~~~------~~~~ 238 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI-MKKIKKGDFS------FEGE 238 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH-HHHHTTTCCC------CCSH
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH-HHHHHcCCCC------CCcc
Confidence 33456899999999999999999999999999999999999999765422211122221 1222222211 0011
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.......++.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 011223468899999999999999999998765
No 100
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1e-37 Score=347.50 Aligned_cols=247 Identities=22% Similarity=0.320 Sum_probs=192.1
Q ss_pred HHHHhccccccCceEEEEEEE----CCCcEEEEEEeecCC----chhhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~----~~g~~VAVK~l~~~~----~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
.+.+.+.||+|+||.||+++. .+++.||+|+++... ......+.+|++++++++||||+++++++...+..+
T Consensus 18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 97 (327)
T 3a62_A 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLY 97 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEE
Confidence 345678999999999999987 478999999997542 223456788999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 98 LILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999998843 45688899999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +.+.+. .+..
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~----~~~~--- 238 (327)
T 3a62_A 171 SIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----TIDKIL----KCKL--- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHH----HTCC---
T ss_pred cccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----HHHHHH----hCCC---
Confidence 43222 12234569999999999999999999999999999999999999997654221 111111 1110
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 872 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RP-----sm~eV~~~ 872 (927)
. .+......+.+++.+|++.+|++|| ++.|+++|
T Consensus 239 ---~----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 ---N----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---C----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---C----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0 1111234688999999999999999 78888876
No 101
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.2e-37 Score=351.98 Aligned_cols=266 Identities=16% Similarity=0.232 Sum_probs=203.9
Q ss_pred HHHHhccccccCceEEEEEEECC------CcEEEEEEeecCCchhh-----------HhHHHHHHHHhhccCCCccceec
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSYQGK-----------REFTNEVTLLSRIHHRNLVQFLG 662 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~------g~~VAVK~l~~~~~~~~-----------~~~~~Ei~iL~~l~HpnIv~l~g 662 (927)
.|.+.+.||+|+||.||+|++.. ++.||||++........ ..+..|+..++.++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 45567899999999999998864 47899999876532211 12344666777888999999999
Q ss_pred ceeec----CeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC--
Q 002409 663 YCQEE----GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-- 736 (927)
Q Consensus 663 ~~~~~----~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~-- 736 (927)
++... ...++||||+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 98764 4589999999 99999998542 35689999999999999999999998 999999999999999
Q ss_pred CCCcEEEEeecCcccccCCCCc------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccccc
Q 002409 737 KHMRAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA 810 (927)
Q Consensus 737 ~~~~vkL~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~ 810 (927)
.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999755432211 1123459999999999999999999999999999999999999998543211
Q ss_pred ccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 811 NCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 811 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
....+...... ..+.+++++.+... ....++.+++..|++.+|++||++.+|++.|++++..
T Consensus 269 ---~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 269 ---KYVRDSKIRYR-ENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp ---HHHHHHHHHHH-HCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhh-hhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 22222222111 12333333333211 1234688999999999999999999999999998764
No 102
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=353.26 Aligned_cols=273 Identities=21% Similarity=0.279 Sum_probs=211.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecC--eEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~--~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 446789999999999999987 48999999997543 233566789999999999999999999988755 77999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE----CCCCcEEEEeecCcccc
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl----~~~~~vkL~DFGla~~~ 752 (927)
+++|+|.+++.... ....+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 91 CPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred CCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999996532 223489999999999999999999998 99999999999999 77888999999999865
Q ss_pred cCCCCceeeeeccCCCccCcccccc--------CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhc
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYIS--------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
.... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||.....+.....+.........
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 167 EDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred cCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 4322 2233569999999999865 56788999999999999999999999754432222222222211111
Q ss_pred cCCccccc-----------CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 825 SGDIQGII-----------DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 825 ~~~~~~~~-----------d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
...+...- +..............+.+++.+|++.||++||++.|+++.+++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111000 00111223456667889999999999999999999999999998763
No 103
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=342.10 Aligned_cols=253 Identities=29% Similarity=0.464 Sum_probs=195.6
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 680 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~g 680 (927)
+.+.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++|
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~ 84 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGG 84 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTC
T ss_pred eeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCC
Confidence 345688999999999999986 789999998643 345678999999999999999999999874 478999999999
Q ss_pred chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc-EEEEeecCcccccCCCCce
Q 002409 681 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-AKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 681 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~-vkL~DFGla~~~~~~~~~~ 759 (927)
+|.+++.... ....+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++.....
T Consensus 85 ~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---- 159 (307)
T 2eva_A 85 SLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---- 159 (307)
T ss_dssp BHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----
Confidence 9999996432 2345788899999999999999999932228999999999999998886 799999998754322
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....|... .+.. +.....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~---~~~~-----~~~~~~ 228 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA---FRIMWAVH---NGTR-----PPLIKN 228 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH---HHHHHHHH---TTCC-----CCCBTT
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH---HHHHHHHh---cCCC-----CCcccc
Confidence 123458999999999999999999999999999999999999997543111 11111111 1111 111111
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
....+.+++.+|++.+|++|||+.|++++|+.+..
T Consensus 229 ----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 229 ----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred ----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 22468899999999999999999999999998754
No 104
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.1e-37 Score=350.54 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=201.0
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+++.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 122 (350)
T 1rdq_E 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence 345688999999999999986 68999999997542 22345688999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 123 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 123 VAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp CTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 999999999853 35689999999999999999999998 9999999999999999999999999999865332
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+. .+.+ .
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~--------~~~~------~- 256 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV--------SGKV------R- 256 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--------HCCC------C-
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHH--------cCCC------C-
Confidence 234569999999999999999999999999999999999999997654221111111 1111 0
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPs-----m~eV~~~ 872 (927)
++......+.+++.+|++.||++||+ +.||++|
T Consensus 257 ---~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 257 ---FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 11122346889999999999999998 8888876
No 105
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.2e-37 Score=335.56 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=202.3
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
..|.+.+.||+|+||.||+|+.. +++.+|+|++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 34566789999999999999887 46789999998765556778999999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE---CCCCcEEEEeecCcccccC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl---~~~~~vkL~DFGla~~~~~ 754 (927)
++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||++.....
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 89 TGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999998843 45689999999999999999999998 99999999999999 7889999999999976543
Q ss_pred CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
.. ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||......+ +... ...+... ...
T Consensus 162 ~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~----~~~~~~~--~~~ 228 (277)
T 3f3z_A 162 GK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE----VMLK----IREGTFT--FPE 228 (277)
T ss_dssp TS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHCCCC--CCH
T ss_pred cc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH----HHHH----HHhCCCC--CCc
Confidence 32 2234469999999998865 48999999999999999999999997644211 1111 1111110 000
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... ......+.+++.+|++.+|++||++.|++++
T Consensus 229 ~~~----~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 229 KDW----LNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hhh----hcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0123468899999999999999999999875
No 106
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-38 Score=351.38 Aligned_cols=256 Identities=25% Similarity=0.418 Sum_probs=200.1
Q ss_pred HHhccccccCceEEEEEEECC-----CcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~~-----g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.+.+.||+|+||.||+|++.. +..||||+++.... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 126 (333)
T 1mqb_A 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE 126 (333)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEe
Confidence 345789999999999998653 23599999975532 335578999999999999999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 127 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 127 YMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999998532 35689999999999999999999998 9999999999999999999999999999865433
Q ss_pred CCc--eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 756 ASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 756 ~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
... ......+|+.|+|||.+....++.++|||||||++|||++ |+.||...... .+...+ ..+..
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~~~~----~~~~~---- 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH----EVMKAI----NDGFR---- 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHH----HTTCC----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH----HHHHHH----HCCCc----
Confidence 221 1222346789999999998899999999999999999999 99999654321 122211 11110
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
...+......+.+++.+|++.+|++||++.||+++|++++...
T Consensus 269 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 269 -----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp -----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -----CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 0011123346889999999999999999999999999987643
No 107
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-37 Score=341.34 Aligned_cols=269 Identities=24% Similarity=0.360 Sum_probs=201.0
Q ss_pred HHHHHHHHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhh--ccCCCccceecceeec----
Q 002409 594 SDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEE---- 667 (927)
Q Consensus 594 ~ei~~~~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~g~~~~~---- 667 (927)
.+.....+.+.+.||+|+||.||+|++. ++.||||++.... ...+..|.+++.. ++||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3444556777899999999999999987 8999999986432 3344455555555 4999999999999877
Q ss_pred CeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC-----CCceecCCCCCCCeEECCCCcEE
Q 002409 668 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAK 742 (927)
Q Consensus 668 ~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDLkp~NILl~~~~~vk 742 (927)
...++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+++ .++|+||||||+|||++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 788999999999999999843 46899999999999999999999852 23899999999999999999999
Q ss_pred EEeecCcccccCCCCce---eeeeccCCCccCccccccCcCCCc------cceeeHHHHHHHHHhC----------CCcc
Q 002409 743 VSDFGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQQLTDK------SDVYSFGVILLELISG----------QEAI 803 (927)
Q Consensus 743 L~DFGla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~s~~------sDVwSlGvvL~elltG----------~~p~ 803 (927)
|+|||+++......... .....||+.|+|||++.+.....+ +|||||||++|||++| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997554332221 123469999999999987766665 9999999999999999 5555
Q ss_pred cccccccccchhhHHHHhhhccCCcccccCCcccCcc-CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 804 SNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 804 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
......... . ........... ..+...... ......++.+++.+|++.+|++|||+.||+++|+.+..
T Consensus 263 ~~~~~~~~~--~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 263 HDLVPSDPS--Y-EDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTTSCSSCC--H-HHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhcCCCCc--h-hhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 432211111 0 10111111111 111111111 12566789999999999999999999999999999865
No 108
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-37 Score=343.96 Aligned_cols=262 Identities=27% Similarity=0.416 Sum_probs=207.9
Q ss_pred HHHHHhccccccCceEEEEEEE------CCCcEEEEEEeecCCc-hhhHhHHHHHHHHhhc-cCCCccceecceeecC-e
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG-R 669 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~------~~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~-~ 669 (927)
..+.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++...+ .
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 106 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 106 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence 3455678999999999999975 2467899999976543 3356789999999999 7999999999987654 5
Q ss_pred EEEEEEeccCCchhhhccccccc------------ccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC
Q 002409 670 SVLVYEFMHNGTLKEHLYGTLTH------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 737 (927)
Q Consensus 670 ~~lV~E~~~~gsL~~~L~~~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~ 737 (927)
.++||||+++|+|.+++...... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE 183 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECC
Confidence 89999999999999999654321 12388999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchh
Q 002409 738 HMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 815 (927)
Q Consensus 738 ~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l 815 (927)
++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||....... .+
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~ 260 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EF 260 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH---HH
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH---HH
Confidence 999999999999865443322 2334558899999999999999999999999999999998 999997644221 11
Q ss_pred hHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 816 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 816 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
... ...+... .. +......+.+++.+|++.+|++|||+.||+++|+.++..
T Consensus 261 ~~~----~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 261 CRR----LKEGTRM-----RA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHH----HHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH----hccCccC-----CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 111 1111110 01 111234688999999999999999999999999998764
No 109
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-37 Score=352.38 Aligned_cols=251 Identities=26% Similarity=0.318 Sum_probs=192.9
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
.|.+.+.||+|+||.||+++.. +++.||||++..... ....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 3556789999999999999987 788999999975432 34668899999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc--EEEEeecCcccccCCC
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKFAVDGA 756 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~--vkL~DFGla~~~~~~~ 756 (927)
+|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++.....
T Consensus 100 ~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 100 GGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp SCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 9999998843 45689999999999999999999998 9999999999999987765 999999999743222
Q ss_pred CceeeeeccCCCccCccccccCcCCCc-cceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDK-SDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~-sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...........+.+..... ...+.
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~~------ 242 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV--KYSIP------ 242 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTT--CCCCC------
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcC--CCCCC------
Confidence 12233469999999999988877665 899999999999999999998655333333332221111 00000
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. .......+.+++.+|++.+|++|||+.|+++|
T Consensus 243 --~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 --D--DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp --T--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred --C--cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 01122467899999999999999999999987
No 110
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.3e-37 Score=347.34 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=199.8
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+++.+ +++.||||+++... ....+.+.+|..+++++ +||||+++++++.+.+..++|||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e 90 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 90 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence 345688999999999999986 58899999997542 23345688899999988 89999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++.....
T Consensus 91 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 91 YVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999998843 35689999999999999999999998 9999999999999999999999999999853322
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccccccc-chhhHHHHhhhccCCcccccCC
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC-RNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..........+..+..
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 2 2234457999999999999999999999999999999999999999653211110 0111111111111111
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcH------HHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSI------SEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm------~eV~~~ 872 (927)
. ++......+.+++.+|++.+|++||++ .|+++|
T Consensus 237 ~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 237 R----IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred C----CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 0 111223468899999999999999985 666665
No 111
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.2e-37 Score=350.67 Aligned_cols=246 Identities=24% Similarity=0.305 Sum_probs=200.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+|+.+ +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++|||
T Consensus 22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E 101 (353)
T 2i0e_A 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 101 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEe
Confidence 445689999999999999987 47889999997542 22345678899999987 89999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 102 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999999843 35689999999999999999999998 9999999999999999999999999999853322
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. +..
T Consensus 175 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--------~~~------- 238 (353)
T 2i0e_A 175 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME--------HNV------- 238 (353)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--------CCC-------
T ss_pred C-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHh--------CCC-------
Confidence 2 223445799999999999999999999999999999999999999976542221111111 111
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCc-----HHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPS-----ISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPs-----m~eV~~~ 872 (927)
.++......+.+++.+|++.+|++||+ +.||++|
T Consensus 239 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 239 ---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 011122346889999999999999994 6788776
No 112
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=358.97 Aligned_cols=251 Identities=23% Similarity=0.261 Sum_probs=201.8
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.||+|+||.||+++.+ +++.||||++++.. ......+.+|..++.+++||||+++++++.+.+..++||||+
T Consensus 64 ~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~ 143 (412)
T 2vd5_A 64 EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYY 143 (412)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCC
Confidence 34678999999999999986 68999999997532 122345889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.......
T Consensus 144 ~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 144 VGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999999532 24689999999999999999999998 999999999999999999999999999986654433
Q ss_pred ceeeeeccCCCccCccccc-------cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccc
Q 002409 758 HVSSIVRGTVGYLDPEYYI-------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 830 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~-------~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 830 (927)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+..+.... .+
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~----~~-- 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL----SL-- 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC----CC--
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc----CC--
Confidence 3344567999999999997 3578999999999999999999999997655333333333321110 00
Q ss_pred ccCCcccCccCHHHHHHHHHHHhhhcCCCCCCC---CcHHHHHHH
Q 002409 831 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR---PSISEVLKD 872 (927)
Q Consensus 831 ~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~R---Psm~eV~~~ 872 (927)
+.... ....++.+++.+|+. +|++| |++.||++|
T Consensus 292 ---p~~~~----~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 ---PLVDE----GVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ---C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ---Ccccc----CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11111 122468899999999 99998 689999876
No 113
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=345.19 Aligned_cols=259 Identities=22% Similarity=0.306 Sum_probs=203.1
Q ss_pred HHHHhccccccCceEEEEEEE-CCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceeccee----ecCeEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ----EEGRSVLVY 674 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~-~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~----~~~~~~lV~ 674 (927)
.|.+.+.||+|+||.||+++. .+++.||||++........+.+.+|++++++++||||+++++++. .....++||
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 109 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence 455678999999999999987 478999999987666666778999999999999999999999986 334789999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999976544567799999999999999999999998 999999999999999999999999999874422
Q ss_pred CCCc--------eeeeeccCCCccCccccccCc---CCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 755 GASH--------VSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 755 ~~~~--------~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
.... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||........ .+.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~- 263 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--SVALAVQNQ- 263 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--CHHHHHHCC-
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--hhhHHhhcc-
Confidence 1100 011234799999999987543 78999999999999999999999965321111 111111110
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
... .........+.+++.+|++.+|++||++.||+++|+.+
T Consensus 264 --~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 264 --LSI----------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp ----C----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred --CCC----------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 000 00112234688999999999999999999999999976
No 114
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.6e-37 Score=343.03 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=203.7
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch------hhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~------~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45667899999999999999886 6889999999754322 2567899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC----cEEEEeec
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 747 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~----~vkL~DFG 747 (927)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999853 35688999999999999999999998 999999999999999888 79999999
Q ss_pred CcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 748 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 748 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ ...... .+.
T Consensus 165 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~i~----~~~ 234 (321)
T 2a2a_A 165 LAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANIT----SVS 234 (321)
T ss_dssp TCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHH----TTC
T ss_pred cceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHH----hcc
Confidence 998654432 2233458999999999999999999999999999999999999997544211 111111 110
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. ..++.... .....+.+++.+|++.+|++|||+.|++++
T Consensus 235 ~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 Y--DFDEEFFS----HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp C--CCCHHHHT----TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred c--ccChhhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 01111111 122468899999999999999999999986
No 115
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=342.85 Aligned_cols=269 Identities=22% Similarity=0.299 Sum_probs=199.7
Q ss_pred HHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-----hhhHhHHHHHHHHhhcc---CCCccceeccee
Q 002409 595 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-----QGKREFTNEVTLLSRIH---HRNLVQFLGYCQ 665 (927)
Q Consensus 595 ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-----~~~~~~~~Ei~iL~~l~---HpnIv~l~g~~~ 665 (927)
++....|.+.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++ ||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 344455667889999999999999874 688999999874321 12346778888887775 999999999997
Q ss_pred ecC-----eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc
Q 002409 666 EEG-----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR 740 (927)
Q Consensus 666 ~~~-----~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~ 740 (927)
... ..++||||+. |+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 755 5799999997 5999988543 233489999999999999999999998 9999999999999999999
Q ss_pred EEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHH
Q 002409 741 AKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK 820 (927)
Q Consensus 741 vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~ 820 (927)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.+...
T Consensus 159 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 236 (308)
T 3g33_A 159 VKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236 (308)
T ss_dssp EEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHC
T ss_pred EEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999998554322 22345689999999999999999999999999999999999999976542222222222111
Q ss_pred hhhccCCcccc-------cCCc---ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 821 LHIESGDIQGI-------IDPS---LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 821 ~~~~~~~~~~~-------~d~~---l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..... ..... +.+. .......+....+.+++.+|++.||++|||+.|+++|
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 237 LPPED-DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCTT-TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCChh-hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 11000 00000 0000 0000111233568899999999999999999999876
No 116
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=351.27 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=193.8
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhccC--CCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHH--RNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~H--pnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||++...+++.||||++.... ....+.+.+|+++|++++| +||+++++++...+..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 44578999999999999999889999999987543 3334678999999999976 999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+.+|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++ ++.+||+|||+++......
T Consensus 90 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999853 45688999999999999999999998 999999999999997 5789999999998654432
Q ss_pred Cc-eeeeeccCCCccCcccccc-----------CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhc
Q 002409 757 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 757 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .+.. ....
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~-~~~~-- 233 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISK-LHAI-- 233 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHH-HHHH--
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHH-HHHH--
Confidence 22 2334569999999999865 6788899999999999999999999965321 1111 1111
Q ss_pred cCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 002409 825 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 873 (927)
Q Consensus 825 ~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L 873 (927)
+++.....++......+.+++.+|++.+|++|||+.|++++-
T Consensus 234 -------~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 234 -------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp -------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -------hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111111112222234688999999999999999999999873
No 117
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.6e-37 Score=341.09 Aligned_cols=269 Identities=23% Similarity=0.379 Sum_probs=210.1
Q ss_pred cCHHHHHHHHHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhh--ccCCCccceecceeecC
Q 002409 591 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG 668 (927)
Q Consensus 591 ~~~~ei~~~~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~g~~~~~~ 668 (927)
+...+.....+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+|+++++. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 4445566667778899999999999999985 899999998643 34567788888887 79999999999998776
Q ss_pred ----eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHh--------hCCCCceecCCCCCCCeEEC
Q 002409 669 ----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLD 736 (927)
Q Consensus 669 ----~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDLkp~NILl~ 736 (927)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 78999999999999999843 35889999999999999999999 66 999999999999999
Q ss_pred CCCcEEEEeecCcccccCCCCc---eeeeeccCCCccCccccccC------cCCCccceeeHHHHHHHHHhC--------
Q 002409 737 KHMRAKVSDFGLSKFAVDGASH---VSSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG-------- 799 (927)
Q Consensus 737 ~~~~vkL~DFGla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwSlGvvL~elltG-------- 799 (927)
.++++||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999865544322 12344699999999998765 344689999999999999999
Q ss_pred --CCcccccccccccchhhHHHHhhhccCCcccccCCcccCc-cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 800 --QEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE-YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 800 --~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
+.||........ ....+.... .... ..+.+... ...+....+.+++.+|++.+|++|||+.||+++|+++
T Consensus 262 ~~~~p~~~~~~~~~--~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 262 DYQLPYYDLVPSDP--SVEEMRKVV-CEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CCCCTTTTTSCSSC--CHHHHHHHH-TTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCccccCcCcc--cHHHHHHHH-HHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 667754332111 111111111 1111 11222211 1345667899999999999999999999999999998
Q ss_pred HH
Q 002409 877 IV 878 (927)
Q Consensus 877 ~~ 878 (927)
..
T Consensus 335 ~~ 336 (342)
T 1b6c_B 335 SQ 336 (342)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 118
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=346.89 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=198.2
Q ss_pred HHHhccccccCceEEEEEEEC-CCcE----EEEEEeecC-CchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~----VAVK~l~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
|.+.+.||+|+||.||+|++. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .++|+
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~ 95 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT 95 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEE
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEE
Confidence 456789999999999999875 3443 577777543 3345678999999999999999999999998765 78999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+.+|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 ~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 96 QLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp CCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999998643 35688999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 755 GASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 755 ~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
.... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...... +..
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~~----~~~---- 237 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILEK----GER---- 237 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHHT----TCC----
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHHHHHc----CCC----
Confidence 3221 2233446889999999999999999999999999999999 99999765422 12221111 110
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
...+......+.+++.+|++.+|++||++.|+++.|+++....
T Consensus 238 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 238 -----LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -----CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -----CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 0111222346889999999999999999999999999987543
No 119
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9e-38 Score=341.28 Aligned_cols=262 Identities=32% Similarity=0.542 Sum_probs=195.4
Q ss_pred HHHHHHHHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 595 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 595 ei~~~~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
|+....+.+.++||+|+||.||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++ .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 344445667789999999999999865 369999987543 33456789999999999999999999966 4556899
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 97 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 99999999999988532 45689999999999999999999998 9999999999999999999999999999754
Q ss_pred cCCC-CceeeeeccCCCccCccccc---cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCc
Q 002409 753 VDGA-SHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 828 (927)
Q Consensus 753 ~~~~-~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 828 (927)
.... ........||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ..+..... .+..
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~----~~~~ 243 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEMVG----RGSL 243 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHHHH----HTSC
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHHhc----cccc
Confidence 3321 22233456899999999986 567888999999999999999999999764311 12222211 1111
Q ss_pred ccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 829 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 829 ~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
..... .........+.+++.+|++.+|++||++.|+++.|+++.
T Consensus 244 ~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 244 SPDLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred Ccchh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 11110 111223356899999999999999999999999999874
No 120
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=347.83 Aligned_cols=255 Identities=25% Similarity=0.315 Sum_probs=187.3
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-CCCccceeccee--------ecCe
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQ--------EEGR 669 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~--------~~~~ 669 (927)
.+.+.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 4556789999999999999975 68999999987766666778999999999996 999999999983 3445
Q ss_pred EEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCc--eecCCCCCCCeEECCCCcEEEEeec
Q 002409 670 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFG 747 (927)
Q Consensus 670 ~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLkp~NILl~~~~~vkL~DFG 747 (927)
.++||||+. |+|.+++.... ....+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+|||
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred EEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence 799999996 79998885432 245689999999999999999999998 7 9999999999999999999999999
Q ss_pred CcccccCCCCce-----------eeeeccCCCccCcccc---ccCcCCCccceeeHHHHHHHHHhCCCcccccccccccc
Q 002409 748 LSKFAVDGASHV-----------SSIVRGTVGYLDPEYY---ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 813 (927)
Q Consensus 748 la~~~~~~~~~~-----------~~~~~gt~~Y~aPE~~---~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~ 813 (927)
+++......... .....||+.|+|||++ ....++.++|||||||++|||++|+.||......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---- 259 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---- 259 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence 998654332211 1134589999999998 5667889999999999999999999999754311
Q ss_pred hhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 814 NIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 814 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.+.. +... ..........+.+++.+|++.+|++||++.|++++|+.+...
T Consensus 260 ~~~~--------~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 260 RIVN--------GKYS--------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp --------------CC--------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Hhhc--------Cccc--------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111 0000 000011112477899999999999999999999999988653
No 121
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3e-37 Score=337.26 Aligned_cols=258 Identities=26% Similarity=0.385 Sum_probs=205.0
Q ss_pred HHhc-cccccCceEEEEEEEC---CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 602 MLEK-KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 602 ~~~~-~IG~G~fG~Vy~~~~~---~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.+.+ .||+|+||.||+|.+. .++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 19 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e 97 (291)
T 1xbb_A 19 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVME 97 (291)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEE
Confidence 3445 8999999999999653 46789999997543 23356799999999999999999999999 5667899999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 98 MAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp CCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 9999999999853 34588999999999999999999998 9999999999999999999999999999865443
Q ss_pred CCcee--eeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 756 ASHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 756 ~~~~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
..... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+...+. .+..
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~~~----~~~~---- 238 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVTAMLE----KGER---- 238 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHH----TTCC----
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHHHH----cCCC----
Confidence 33222 22346789999999998889999999999999999999 99999764421 2222211 1111
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHHHHHh
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIEREAA 884 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~~~~~ 884 (927)
...+......+.+++.+|++.+|++||++.||++.|+++........
T Consensus 239 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 239 -----MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 11112233468899999999999999999999999999987665443
No 122
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=348.88 Aligned_cols=248 Identities=24% Similarity=0.351 Sum_probs=185.9
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
+.+.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 132 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence 456789999999999999987 57889999997543 345688999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC---CCcEEEEeecCcccccCCC
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~---~~~vkL~DFGla~~~~~~~ 756 (927)
|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 133 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 133 GELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 999998843 35689999999999999999999998 9999999999999975 889999999999855332
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+... +..+... .. ...
T Consensus 205 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~----i~~~~~~-~~-~~~ 274 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFRR----ILNCEYY-FI-SPW 274 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---HHHHH----HHTTCCC-CC-TTT
T ss_pred -cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---HHHHH----HHhCCCc-cC-Cch
Confidence 22234568999999999999899999999999999999999999996543111 11111 1111110 00 011
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. ......+.+++.+|++.||++|||+.|++++
T Consensus 275 ~----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 W----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp T----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred h----hhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1223468899999999999999999999875
No 123
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=350.75 Aligned_cols=248 Identities=23% Similarity=0.309 Sum_probs=200.0
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+++|++++||||+++++++.+.+..++||||
T Consensus 17 y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~ 96 (384)
T 4fr4_A 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDL 96 (384)
T ss_dssp EEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence 456789999999999999876 57889999987542 22346788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+.+|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 97 LLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 999999999853 45689999999999999999999998 9999999999999999999999999999865433
Q ss_pred CceeeeeccCCCccCcccccc---CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 757 SHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ....+...... ..
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-~~~~~~~~~~~----~~------ 236 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-SSKEIVHTFET----TV------ 236 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-CHHHHHHHHHH----CC------
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-cHHHHHHHHhh----cc------
Confidence 22344569999999999974 45899999999999999999999999754321 11122221111 10
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCc-HHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPS-ISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPs-m~eV~~~ 872 (927)
..++......+.+++.+|++.+|++||+ +.+|.++
T Consensus 237 ----~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 237 ----VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred ----cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 0111222346889999999999999998 7777653
No 124
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5e-37 Score=334.77 Aligned_cols=253 Identities=22% Similarity=0.365 Sum_probs=198.9
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
..+.+.+.||+|+||.||+++.. +++.+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 35667899999999999999876 68899999987653 33457789999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE---CCCCcEEEEeecCccccc
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl---~~~~~vkL~DFGla~~~~ 753 (927)
+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999865544456799999999999999999999998 99999999999999 456789999999997554
Q ss_pred CCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 754 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 754 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
... ......||+.|+|||.+. +.++.++|||||||++|||++|+.||...... .+....... ..... ..
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~----~~~~~~~~~--~~~~~--~~ 247 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE----EVQQKATYK--EPNYA--VE 247 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHC--CCCCC--C-
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH----HHHhhhccC--Ccccc--cc
Confidence 322 223456899999999875 56889999999999999999999999764421 111111111 00000 00
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... ....+.+++.+|++.||++|||+.||+++
T Consensus 248 ---~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 ---CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---cCc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001 12367899999999999999999999874
No 125
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3e-37 Score=351.93 Aligned_cols=272 Identities=18% Similarity=0.247 Sum_probs=203.4
Q ss_pred HHHHhcccccc--CceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 600 TKMLEKKIGSG--GFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 600 ~~~~~~~IG~G--~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
.|.+.+.||+| +||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 35567899999 99999999987 68999999997543 333467888999999999999999999999999999999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+.....
T Consensus 106 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 106 SFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp ECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999998543 234589999999999999999999998 999999999999999999999999998864322
Q ss_pred CCC------ceeeeeccCCCccCcccccc--CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh-c-
Q 002409 755 GAS------HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI-E- 824 (927)
Q Consensus 755 ~~~------~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~-~- 824 (927)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+........ .
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 111 11122468999999999987 6799999999999999999999999976442221111110000000 0
Q ss_pred -----------------cCCcccccCC---c------ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH--HHHH
Q 002409 825 -----------------SGDIQGIIDP---S------LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDA 876 (927)
Q Consensus 825 -----------------~~~~~~~~d~---~------l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~--L~~~ 876 (927)
...+.+.+.. . ....+.......+.+++.+|++.||++|||+.|++++ ++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 0000000000 0 0000112223468899999999999999999999987 5544
No 126
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.9e-37 Score=337.32 Aligned_cols=257 Identities=16% Similarity=0.243 Sum_probs=197.0
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 2h34_A 36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRL 115 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEe
Confidence 456789999999999999976 688999999875432 2246788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 116 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 116 INGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999999853 35689999999999999999999998 99999999999999999999999999997654433
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .+....... .....
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~---~~~~~------ 255 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS----VMGAHINQA---IPRPS------ 255 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH----HHHHHHHSC---CCCGG------
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH----HHHHHhccC---CCCcc------
Confidence 33333456899999999999999999999999999999999999999764411 111111110 00000
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCC-cHHHHHHHHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIVI 879 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RP-sm~eV~~~L~~~~~~ 879 (927)
.........+.+++.+|++.+|++|| ++.++++.|++++..
T Consensus 256 --~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 256 --TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp --GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred --ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 11112223688999999999999999 999999999987654
No 127
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=377.02 Aligned_cols=254 Identities=25% Similarity=0.419 Sum_probs=206.3
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.+.||+|+||.||+|+++++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+++
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~ 345 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 345 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred hhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcC
Confidence 345678999999999999999988899999997654 335679999999999999999999999876 678999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++... ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 346 gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 346 GSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp EEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred CcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 9999999542 234588999999999999999999998 99999999999999999999999999998654321111
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....++..|+|||.+....++.++|||||||+||||++ |+.||...... .+.+.+ ..+.. .
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~----~~~~~i----~~~~~---------~ 483 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQV----ERGYR---------M 483 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH----HHHHHH----HTTCC---------C
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH----HcCCC---------C
Confidence 223346789999999999999999999999999999999 99999754311 222221 11110 0
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAI 877 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~ 877 (927)
..+......+.+++.+|++.+|++|||+.+|++.|+.+.
T Consensus 484 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111223346889999999999999999999999999875
No 128
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9e-38 Score=363.07 Aligned_cols=246 Identities=23% Similarity=0.303 Sum_probs=192.5
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecC---CchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~---~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+|+.. +++.||||++... .......+.+|+.++++++||||+++++++...+..++||||
T Consensus 150 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~ 229 (446)
T 4ejn_A 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229 (446)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECC
T ss_pred cEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEee
Confidence 455789999999999999876 6889999999753 223345678899999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhh-CCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
+++|+|.+++. ....+++..+..++.|++.||+|||+ + +|+||||||+|||++.++.+||+|||+++.....
T Consensus 230 ~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 230 ANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CSSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred CCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999884 34568999999999999999999998 7 9999999999999999999999999999754332
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+.. ....+
T Consensus 303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~~--~~~~~------- 368 (446)
T 4ejn_A 303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELILM--EEIRF------- 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH--CCCCC-------
T ss_pred C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHHHh--CCCCC-------
Confidence 2 2233456999999999999999999999999999999999999999765422 12221111 11111
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RP-----sm~eV~~~ 872 (927)
+......+.+++.+|++.||++|| ++.|+++|
T Consensus 369 -----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 369 -----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 111224688999999999999999 99999986
No 129
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=340.04 Aligned_cols=263 Identities=22% Similarity=0.284 Sum_probs=195.9
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD 85 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCC
Confidence 45688999999999999986 589999999865432 234668899999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 758 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 758 (927)
+++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 86 HTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp EEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 9999888742 35688999999999999999999998 999999999999999999999999999986543222
Q ss_pred eeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHh-------hhccCC-cc
Q 002409 759 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL-------HIESGD-IQ 829 (927)
Q Consensus 759 ~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~-------~~~~~~-~~ 829 (927)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+...... ...... ..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 2234468999999999976 67899999999999999999999999765422211111111000 000000 00
Q ss_pred --cccCCcccCc---cCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 830 --GIIDPSLLDE---YDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 830 --~~~d~~l~~~---~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...++.-... ........+.+++.+|++.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000 001223468899999999999999999999986
No 130
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.3e-38 Score=346.36 Aligned_cols=256 Identities=24% Similarity=0.379 Sum_probs=192.6
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCe----EE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR----SV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~----~~ 671 (927)
.|.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++..... .+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 92 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence 3456789999999999999874 688999999976532 234568899999999999999999999876543 49
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999853 45689999999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCCc--eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 752 AVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 752 ~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-------~~~~~~~~~~~~ 238 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-------VAYQHVREDPIP 238 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-------HHHHHHHCCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHhcCCCCC
Confidence 5433221 2233568999999999999999999999999999999999999997644211 111111111100
Q ss_pred cccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHH-HHHHH
Q 002409 830 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLK-DIQDA 876 (927)
Q Consensus 830 ~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~-~L~~~ 876 (927)
+ ..........+.+++.+|++.||++||++.++++ .|...
T Consensus 239 ----~---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 239 ----P---SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ----H---HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ----c---ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0 0001112346889999999999999997666554 45443
No 131
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.7e-37 Score=334.37 Aligned_cols=262 Identities=21% Similarity=0.313 Sum_probs=203.7
Q ss_pred HHHHHhccccccCceEEEEEEE-CCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecce-eecCeEEEEEEe
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEF 676 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~-~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~~~lV~E~ 676 (927)
..|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+|++++++++|++++..++++ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 3456678999999999999987 468899999876443 234688999999999988887777766 566778999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE---CCCCcEEEEeecCccccc
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl---~~~~~vkL~DFGla~~~~ 753 (927)
+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 87 L-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp C-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred c-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9 99999998532 34689999999999999999999998 99999999999999 788999999999998654
Q ss_pred CCCCc------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 754 DGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 754 ~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.......... .
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~ 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-P 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-C
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-h
Confidence 43221 2234569999999999999999999999999999999999999997654322222222221111110 0
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.. .+... ....+.+++.+|++.+|++||++.||++.|++++..
T Consensus 239 ~~-----~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 239 IE-----VLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HH-----HHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh-----hhhcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00 00011 124688999999999999999999999999998754
No 132
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.9e-37 Score=342.67 Aligned_cols=261 Identities=22% Similarity=0.298 Sum_probs=203.9
Q ss_pred cCHHHHHHHHHHHh-ccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhc-cCCCccceeccee
Q 002409 591 FTLSDIEDATKMLE-KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQ 665 (927)
Q Consensus 591 ~~~~ei~~~~~~~~-~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~ 665 (927)
+...+.....|.+. +.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++++ +||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 44445555555554 88999999999999877 68999999987542 23356789999999999 5699999999999
Q ss_pred ecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC---CCcEE
Q 002409 666 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAK 742 (927)
Q Consensus 666 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~---~~~vk 742 (927)
..+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+|
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 999999999999999999998542 245689999999999999999999998 9999999999999998 78999
Q ss_pred EEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhh
Q 002409 743 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 743 L~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
|+|||+++...... ......||+.|+|||++....++.++|||||||++|||++|+.||......+....+.. .
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~----~ 248 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ----V 248 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----T
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh----c
Confidence 99999998654322 22335699999999999999999999999999999999999999976542211111111 0
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.... ...........+.+++.+|++.+|++|||+.|++++
T Consensus 249 --~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 249 --NVDY--------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --CCCC--------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --cccc--------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0000 011111223468899999999999999999999876
No 133
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.4e-37 Score=337.73 Aligned_cols=255 Identities=30% Similarity=0.474 Sum_probs=198.4
Q ss_pred HHHhccccccCceEEEEEEECC----CcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceeccee-ecCeEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~----g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-~~~~~~lV~ 674 (927)
+.+.+.||+|+||.||+|++.+ ...+|+|.+.... ....+.+.+|+.++++++||||+++++++. ..+..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 3456889999999999998653 2358999987543 334567899999999999999999999864 456789999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
||+++|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 107 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 107 PYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp ECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred eCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999954 245678999999999999999999998 999999999999999999999999999975543
Q ss_pred CCC---ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCccc
Q 002409 755 GAS---HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQG 830 (927)
Q Consensus 755 ~~~---~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 830 (927)
... .......||+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+...... +..
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~~~~~~----~~~-- 250 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYLLQ----GRR-- 250 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----THHHHHHT----TCC--
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HHHHHHhc----CCC--
Confidence 221 12233457889999999999999999999999999999999 55555543311 11111111 110
Q ss_pred ccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 831 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 831 ~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
... +......+.+++.+|++.+|++||++.|+++.|++++.
T Consensus 251 ~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 251 LLQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp CCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000 11122468899999999999999999999999999875
No 134
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-37 Score=336.38 Aligned_cols=254 Identities=24% Similarity=0.354 Sum_probs=200.2
Q ss_pred hccccccCceEEEEEEECC-C---cEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeecCeE-EEEEEec
Q 002409 604 EKKIGSGGFGVVYYGKLKD-G---KEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS-VLVYEFM 677 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~~-g---~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~-~lV~E~~ 677 (927)
.+.||+|+||.||+|++.+ + ..+|+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 5789999999999998642 2 3699999875433 3456789999999999999999999999876655 9999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC-
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA- 756 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~- 756 (927)
.+|+|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 106 CHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp TTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred cCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 99999999854 245688999999999999999999998 99999999999999999999999999997543321
Q ss_pred --CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 757 --SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 757 --~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
........+|+.|+|||.+.+..++.++|||||||++|||++|..|+...... ..+....... ..
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~---~~~~~~~~~~----~~------ 246 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP---FDLTHFLAQG----RR------ 246 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG---GGHHHHHHTT----CC------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH---HHHHHHhhcC----CC------
Confidence 11223345788999999999999999999999999999999966654332211 1222221111 10
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
...+......+.+++.+|++.+|++|||+.|+++.|++++..
T Consensus 247 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 247 ---LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 001111234688999999999999999999999999998753
No 135
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.9e-37 Score=333.21 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=200.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 87 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence 345688999999999999876 58899999987543 233467889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc---EEEEeecCcccccC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVD 754 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~---vkL~DFGla~~~~~ 754 (927)
++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++.....
T Consensus 88 ~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 88 TGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999888843 45689999999999999999999998 9999999999999986655 99999999976543
Q ss_pred CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .+..... .+.... ..+
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~----~~~~~~-~~~ 229 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQIK----AGAYDY-PSP 229 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HTCCCC-CTT
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh----HHHHHHH----hccccC-Cch
Confidence 322 23356899999999999999999999999999999999999999764421 1111111 111100 000
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... .....+.+++.+|++.+|++|||+.|++++
T Consensus 230 -~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 -EWD----TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TTT----TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -hhc----ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 011 122468899999999999999999999886
No 136
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=351.95 Aligned_cols=254 Identities=30% Similarity=0.478 Sum_probs=192.6
Q ss_pred HHhccccccCceEEEEEEEC--CC--cEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceee-cCeEEEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLK--DG--KEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-EGRSVLVYE 675 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~--~g--~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-~~~~~lV~E 675 (927)
.+.+.||+|+||.||+|++. ++ ..||||.++... ....+.+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 34678999999999999864 22 358999886543 3445779999999999999999999998754 567899999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++... ...+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 172 ~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 172 YMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999532 34578899999999999999999998 9999999999999999999999999999855432
Q ss_pred CCc---eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 756 ASH---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 756 ~~~---~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .+..... .+.. .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~~~~----~~~~--~ 315 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITVYLL----QGRR--L 315 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHHHHH----TTCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHHHHH----cCCC--C
Confidence 211 1233457889999999999999999999999999999999 67777654322 1222111 1110 0
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
.. +......+.+++.+|++.+|++||++.|++++|++++.
T Consensus 316 ~~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 316 LQ-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp CC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00 11223468899999999999999999999999999864
No 137
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.2e-37 Score=344.41 Aligned_cols=256 Identities=28% Similarity=0.446 Sum_probs=202.4
Q ss_pred HHHhccccccCceEEEEEEEC-CCcE--EEEEEeecC-CchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKE--IAVKVLTSN-SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~--VAVK~l~~~-~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+|+.. ++.. +|+|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 106 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 106 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEe
Confidence 456789999999999999875 4554 499988754 233456789999999999 99999999999999999999999
Q ss_pred eccCCchhhhccccc------------ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEE
Q 002409 676 FMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 743 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL 743 (927)
|+++|+|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEE
Confidence 999999999986542 2234689999999999999999999998 9999999999999999999999
Q ss_pred EeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhh
Q 002409 744 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 744 ~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
+|||+++..... .......+++.|+|||.+....++.++|||||||++|||++ |+.||...... .+.+.
T Consensus 184 ~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~~~---- 253 (327)
T 1fvr_A 184 ADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEK---- 253 (327)
T ss_dssp CCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHH----
T ss_pred cccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH----HHHHH----
Confidence 999998733211 11223347889999999988889999999999999999998 99999764421 11111
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
+..+.. ...+......+.+++.+|++.+|++||++.|++++|++++.
T Consensus 254 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 254 LPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp GGGTCC---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCC---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 111110 01111223468899999999999999999999999999875
No 138
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.8e-37 Score=354.23 Aligned_cols=248 Identities=23% Similarity=0.322 Sum_probs=193.9
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhcc--CCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~--HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||++...+++.||||++.... ......+.+|+++|++++ ||||+++++++...+..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 55678999999999999998889999999987543 334567899999999996 5999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+.+++|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++ ++.+||+|||+++......
T Consensus 137 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 668899999853 34688889999999999999999998 999999999999995 5899999999998654332
Q ss_pred Cc-eeeeeccCCCccCcccccc-----------CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhc
Q 002409 757 SH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 757 ~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~~~~- 281 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAII- 281 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHH-
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHHHHh-
Confidence 22 2334569999999999865 3688899999999999999999999965321 111111111
Q ss_pred cCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 825 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 825 ~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
++.....++......+.+++.+|++.+|++||++.|++++
T Consensus 282 --------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 --------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111111111123468899999999999999999999976
No 139
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-38 Score=348.71 Aligned_cols=258 Identities=23% Similarity=0.403 Sum_probs=185.4
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhh--ccCCCccceecceeecC----eEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG----RSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~g~~~~~~----~~~lV~ 674 (927)
+.+.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 80 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEE
Confidence 446789999999999999876 899999998643 34567778888877 79999999999998876 789999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHh--------hCCCCceecCCCCCCCeEECCCCcEEEEee
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSDF 746 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDLkp~NILl~~~~~vkL~DF 746 (927)
||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 81 e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp ECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred eccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999843 35778888999999999999999 76 9999999999999999999999999
Q ss_pred cCcccccCCCCce---eeeeccCCCccCccccccC------cCCCccceeeHHHHHHHHHhC----------CCcccccc
Q 002409 747 GLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISNEK 807 (927)
Q Consensus 747 Gla~~~~~~~~~~---~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwSlGvvL~elltG----------~~p~~~~~ 807 (927)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433221 2334699999999999765 445689999999999999999 55554322
Q ss_pred ccc-ccchhhHHHHhhhccCCcccccCCcccCcc-CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 808 FGA-NCRNIVQWAKLHIESGDIQGIIDPSLLDEY-DIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 808 ~~~-~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
... ....+...+ .... ..+.....+ ..+....+.+++.+|++.||++|||+.||++.|+++..
T Consensus 233 ~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 233 PSDPSVEEMRKVV----CEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp C-CCCCC-CHHHH----TTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCCccHHHHHHHH----HHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 111 111111111 1111 111111111 23566789999999999999999999999999998754
No 140
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.7e-37 Score=334.66 Aligned_cols=244 Identities=23% Similarity=0.379 Sum_probs=177.8
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 345678999999999999865 68899999987542 23356788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+ +++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 95 A-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp C-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred c-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9 6788877743 35689999999999999999999998 99999999999999999999999999997554332
Q ss_pred CceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....... +... ...+.. .
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~----~~~~~~------~ 230 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFKN----ISNGVY------T 230 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----HHHTCC------C
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH----HHHH----HHhCCC------C
Confidence 2233458999999999987765 689999999999999999999997654221 1111 111111 0
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+......+.+++.+|++.+|++|||+.|++++
T Consensus 231 ----~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 ----LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 111122357899999999999999999999875
No 141
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=343.23 Aligned_cols=268 Identities=24% Similarity=0.379 Sum_probs=194.0
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHH--HHHHhhccCCCccceeccee-----ecCeEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNE--VTLLSRIHHRNLVQFLGYCQ-----EEGRSVLV 673 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~E--i~iL~~l~HpnIv~l~g~~~-----~~~~~~lV 673 (927)
+.+.+.||+|+||.||+|+.. ++.||||++.... ...+..| +..+..++||||+++++.+. .....++|
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 15 LKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp EEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hheeeecccCCCeEEEEEEEC-CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 345689999999999999874 8999999987443 2333444 44455689999999998543 23367899
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC------CCceecCCCCCCCeEECCCCcEEEEeec
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------VPAIIHRDLKSSNILLDKHMRAKVSDFG 747 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------~~~ivHrDLkp~NILl~~~~~vkL~DFG 747 (927)
|||+++|+|.+++.. ...++..++.++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 91 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp ECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 999999999999843 34588899999999999999999862 2389999999999999999999999999
Q ss_pred CcccccCCC-------CceeeeeccCCCccCcccccc-------CcCCCccceeeHHHHHHHHHhCCCcccccccccccc
Q 002409 748 LSKFAVDGA-------SHVSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR 813 (927)
Q Consensus 748 la~~~~~~~-------~~~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~ 813 (927)
+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+..........
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998654321 111223469999999999976 456778999999999999999987764332111111
Q ss_pred hhhH----------HHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 814 NIVQ----------WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 814 ~l~~----------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.... ..............+..... ........+.+++.+|++.+|++|||+.||++.|++++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 1110 00000001110011111110 1233556799999999999999999999999999999864
No 142
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.2e-37 Score=333.48 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=200.3
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch------hhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~------~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
..|.+.+.||+|+||.||+++.. +++.||+|++...... ..+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 34567789999999999999987 6899999998754221 3567899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC----cEEEEeec
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFG 747 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~----~vkL~DFG 747 (927)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +++||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999843 45689999999999999999999998 999999999999999877 89999999
Q ss_pred CcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 748 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 748 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
+++...... ......||+.|+|||.+....++.++||||||+++|||++|+.||......+ ..... ....
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~----~~~~ 227 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNI----SAVN 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHH----HTTC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH----HHHHh----Hhcc
Confidence 997654322 1233458999999999998999999999999999999999999997644211 11111 1110
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. ..++... ......+.+++.+|++.+|++||++.|++++
T Consensus 228 ~--~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 Y--DFDEEYF----SNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C--CCCHHHH----TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred c--CCcchhc----ccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 0000111 1123468899999999999999999999985
No 143
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.3e-36 Score=332.35 Aligned_cols=260 Identities=22% Similarity=0.310 Sum_probs=203.6
Q ss_pred HHHhccccccCceEEEEEEE-CCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecce-eecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~-~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~-~~~~~~~lV~E~~~ 678 (927)
|.+.+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.++++++|++++..+.++ ...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 34568899999999999987 4789999999875432 35688999999999998877777666 5567789999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC---CCCcEEEEeecCcccccCC
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~---~~~~vkL~DFGla~~~~~~ 755 (927)
+++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 88 ~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 89999998532 34689999999999999999999998 999999999999994 7889999999999865543
Q ss_pred CCc------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 756 ASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 756 ~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+......... ....
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~ 240 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPIE 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-CchH
Confidence 321 123456999999999999999999999999999999999999999864422222222111111111 0000
Q ss_pred cccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 830 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 830 ~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.+.. .....+.+++.+|++.+|++||++.||++.|+++...
T Consensus 241 -----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 241 -----VLCK----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp -----HHTT----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred -----HHHh----hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 0011 1224688999999999999999999999999998653
No 144
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=346.50 Aligned_cols=264 Identities=27% Similarity=0.398 Sum_probs=206.8
Q ss_pred HHHHhccccccCceEEEEEEE-----CCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecC--eEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~-----~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~--~~~l 672 (927)
.+.+.+.||+|+||.||++++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++
T Consensus 42 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 121 (326)
T 2w1i_A 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121 (326)
T ss_dssp GEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEE
T ss_pred HceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEE
Confidence 345678999999999999984 368899999998766666778999999999999999999999886644 6799
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 122 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 122 IMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999998543 34589999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCce--eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccc--------cccchhhHHHHhh
Q 002409 753 VDGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG--------ANCRNIVQWAKLH 822 (927)
Q Consensus 753 ~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~--------~~~~~l~~~~~~~ 822 (927)
....... .....++..|+|||.+.+..++.++|||||||++|||++|+.|+...... .............
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 4433221 12334678899999999888999999999999999999999988643200 0000011111111
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
...+.. ...+......+.+++.+|++.+|++||++.||++.|+++..
T Consensus 276 ~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 276 LKNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCCC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111110 11112233568899999999999999999999999998864
No 145
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-37 Score=349.51 Aligned_cols=252 Identities=24% Similarity=0.321 Sum_probs=201.1
Q ss_pred HHHhccccccCceEEEEEEE----CCCcEEEEEEeecCC----chhhHhHHHHHHHHhhc-cCCCccceecceeecCeEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~----~~g~~VAVK~l~~~~----~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~ 671 (927)
|.+.+.||+|+||.||+++. .+++.||||+++... ......+.+|+++++++ +||||+++++++...+..+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 135 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH 135 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence 45678999999999999987 368999999986532 22345677899999999 6999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 136 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 99999999999999853 35689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCceeeeeccCCCccCcccccc--CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.+.....
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~------- 281 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS------- 281 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-------
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc-------
Confidence 54433333444579999999999985 457889999999999999999999997544222222222211110
Q ss_pred cccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHHHH
Q 002409 830 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKDI 873 (927)
Q Consensus 830 ~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RP-----sm~eV~~~L 873 (927)
.+ .++......+.+++.+|++.||++|| ++.|++++.
T Consensus 282 ---~~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 ---EP----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---CC----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---CC----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 01 11122234678999999999999999 999999875
No 146
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.8e-37 Score=334.23 Aligned_cols=244 Identities=25% Similarity=0.403 Sum_probs=197.2
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 345688999999999999876 56789999986542 12246688999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 91 APLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 999999998843 35688999999999999999999998 9999999999999999999999999988643322
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+....+ .....
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~-------- 224 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--------SRVEF-------- 224 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--------HHTCC--------
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH--------HhCCC--------
Confidence 223346899999999999999999999999999999999999999765422111111 11100
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.++......+.+++.+|++.+|++||++.|++++
T Consensus 225 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 --TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0111123467899999999999999999999987
No 147
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.2e-37 Score=351.02 Aligned_cols=242 Identities=26% Similarity=0.325 Sum_probs=189.5
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHH-HhhccCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~i-L~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+++.+ +++.||||+++.... .....+..|..+ ++.++||||+++++++.+.+..++|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 456789999999999999987 578899999976532 223456667766 577899999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.....
T Consensus 120 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 120 YINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999998843 45688899999999999999999998 9999999999999999999999999999854332
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.. +.+ .
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--------~~~------~ 257 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN--------KPL------Q 257 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHH--------SCC------C
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh--------ccc------C
Confidence 2 233455799999999999999999999999999999999999999976542222222211 111 0
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISE 868 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~e 868 (927)
+... ....+.+++.+|++.+|++||++.+
T Consensus 258 ~~~~----~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 258 LKPN----ITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CCSS----SCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCC----CCHHHHHHHHHHcccCHHhCCCCCC
Confidence 1111 2235789999999999999999853
No 148
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=370.66 Aligned_cols=249 Identities=26% Similarity=0.415 Sum_probs=200.0
Q ss_pred cccccCceEEEEEEEC---CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCCc
Q 002409 606 KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 681 (927)
Q Consensus 606 ~IG~G~fG~Vy~~~~~---~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gs 681 (927)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+++|++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999874 45679999997653 3346789999999999999999999999976 56899999999999
Q ss_pred hhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCcee-
Q 002409 682 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS- 760 (927)
Q Consensus 682 L~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~- 760 (927)
|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99998542 45689999999999999999999998 999999999999999999999999999986543322211
Q ss_pred -eeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 761 -SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 761 -~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
....+|+.|+|||++....++.++|||||||++|||++ |+.||...... .+.+.+ ..+.. .
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~~~i----~~~~~---------~ 558 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAFI----EQGKR---------M 558 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----HHHHHH----HTTCC---------C
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHHHH----HcCCC---------C
Confidence 22335689999999999999999999999999999998 99999765422 222221 11211 1
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
..+......+.+++.+|++.+|++||++.+|++.|+.+..
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1122334578899999999999999999999999998764
No 149
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.2e-37 Score=332.13 Aligned_cols=247 Identities=23% Similarity=0.362 Sum_probs=179.9
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 345688999999999999874 789999999865421 2236788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 93 CHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred CCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999998532 35689999999999999999999998 99999999999999999999999999997654322
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+ ... +...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~------~~~~ 231 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV--------VLA------DYEM 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C--------CSS------CCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH--------hhc------ccCC
Confidence 1 223346899999999999888999999999999999999999999764422111100 000 0011
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+......+.+++.+|++.+|++||++.|++++
T Consensus 232 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 232 ----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ----ccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 11123467899999999999999999999875
No 150
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.6e-37 Score=339.31 Aligned_cols=261 Identities=27% Similarity=0.407 Sum_probs=197.1
Q ss_pred HHHHHhccccccCceEEEEEEEC----CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecC----
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG---- 668 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~----~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~---- 668 (927)
..+.+.+.||+|+||.||+|++. .++.||||+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 34556788999999999999765 24579999987542 233467899999999999999999999997655
Q ss_pred -eEEEEEEeccCCchhhhccccc--ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEe
Q 002409 669 -RSVLVYEFMHNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 745 (927)
Q Consensus 669 -~~~lV~E~~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~D 745 (927)
..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEee
Confidence 3499999999999999984322 2345689999999999999999999998 999999999999999999999999
Q ss_pred ecCcccccCCCC-ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhh
Q 002409 746 FGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 746 FGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+......
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~~~-- 264 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMYDYLLH-- 264 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHHHT--
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHHHHHHc--
Confidence 999976543321 12233457889999999999999999999999999999999 88898765422 12221111
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
+... ..+......+.+++.+|++.+|++||++.|++++|++++..
T Consensus 265 --~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 265 --GHRL---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp --TCCC---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCC---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1100 11112234688999999999999999999999999998753
No 151
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.6e-37 Score=337.84 Aligned_cols=256 Identities=23% Similarity=0.322 Sum_probs=194.8
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEEeccCCc
Q 002409 604 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 681 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E~~~~gs 681 (927)
.+.||+|+||.||+|+.. +++.||||++..........+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 367999999999999865 6899999999876555567889999999985 79999999999999999999999999999
Q ss_pred hhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc---EEEEeecCcccccCCC--
Q 002409 682 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVDGA-- 756 (927)
Q Consensus 682 L~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~---vkL~DFGla~~~~~~~-- 756 (927)
|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++......
T Consensus 98 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 98 ILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999853 35688999999999999999999998 9999999999999998776 9999999987543211
Q ss_pred ----CceeeeeccCCCccCcccccc-----CcCCCccceeeHHHHHHHHHhCCCcccccccccccc-------hhhHHHH
Q 002409 757 ----SHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCR-------NIVQWAK 820 (927)
Q Consensus 757 ----~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~-------~l~~~~~ 820 (927)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||......+... .......
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 111223459999999999875 568999999999999999999999997643211000 0000011
Q ss_pred hhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 821 LHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 821 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..+..+... +..... ......+.+++.+|++.||++|||+.|++++
T Consensus 251 ~~i~~~~~~--~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKYE--FPDKDW----AHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCCC--CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCcc--cCchhc----ccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111110 000000 0123468899999999999999999999986
No 152
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.2e-37 Score=334.01 Aligned_cols=246 Identities=19% Similarity=0.302 Sum_probs=198.0
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
..|.+.+.||+|+||.||+|+.. +++.||||++... .......+.+|+..+.++ +||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 44566789999999999999887 7899999999754 233456788999999999 9999999999999999999999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC----------------
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---------------- 738 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~---------------- 738 (927)
||+++++|.+++.........+++..++.++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 99999999999965433336689999999999999999999998 99999999999999844
Q ss_pred ---CcEEEEeecCcccccCCCCceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccch
Q 002409 739 ---MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 814 (927)
Q Consensus 739 ---~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~ 814 (927)
..+||+|||++....... ...||+.|+|||.+.+. .++.++|||||||++|||++|..++.... .
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~ 236 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------Q 236 (289)
T ss_dssp --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------H
T ss_pred CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------H
Confidence 479999999998654322 23489999999999765 56679999999999999999988764332 1
Q ss_pred hhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 815 IVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 815 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... ...+... .+... ....+.+++.+|++.+|++|||+.|++++
T Consensus 237 ~~~-----~~~~~~~-----~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHE-----IRQGRLP-----RIPQV----LSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHH-----HHTTCCC-----CCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHH-----HHcCCCC-----CCCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111 1112111 11112 22468899999999999999999999875
No 153
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.3e-37 Score=331.18 Aligned_cols=252 Identities=28% Similarity=0.435 Sum_probs=204.9
Q ss_pred HHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceee-------
Q 002409 595 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------- 666 (927)
Q Consensus 595 ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~------- 666 (927)
+.....+.+.+.||+|+||.||+|+.. +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 344455667889999999999999987 78999999987543 457789999999999999999998854
Q ss_pred ---------cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC
Q 002409 667 ---------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK 737 (927)
Q Consensus 667 ---------~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~ 737 (927)
....++||||+++|+|.+++... ....+++..++.++.|++.||.|||++ +|+||||||+|||++.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 44579999999999999999643 235689999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhH
Q 002409 738 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 817 (927)
Q Consensus 738 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~ 817 (927)
++.+||+|||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|..|+.... ....
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~~~ 229 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------KFFT 229 (284)
T ss_dssp TTEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------HHHH
T ss_pred CCCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------HHHH
Confidence 9999999999998654432 2233458999999999999999999999999999999999998875322 1111
Q ss_pred HHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 818 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 818 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
....+.+. ..++ ..+.+++.+|++.+|++||++.|++++|+.+...
T Consensus 230 ----~~~~~~~~--------~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 230 ----DLRDGIIS--------DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp ----HHHTTCCC--------TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ----Hhhccccc--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 11112111 1122 3578999999999999999999999999987543
No 154
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.3e-37 Score=345.62 Aligned_cols=245 Identities=24% Similarity=0.381 Sum_probs=196.6
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.+.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 3455678999999999999874 788999999975432 223568899999999999999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+. |+|.+++.. ....+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 135 YCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp CCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred cCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 997 688877743 235689999999999999999999998 9999999999999999999999999999755332
Q ss_pred CCceeeeeccCCCccCccccc---cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
....||+.|+|||++. ...++.++|||||||++|||++|+.||....... .+.. .. .+....
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~---~~~~----~~-~~~~~~-- 272 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---ALYH----IA-QNESPA-- 272 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHH----HH-HSCCCC--
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHH----HH-hcCCCC--
Confidence 2346899999999985 5678999999999999999999999997543111 1111 11 111111
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... ......+.+++.+|++.+|++|||+.|++++
T Consensus 273 ---~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 273 ---LQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---CCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CCC---CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111 1122357899999999999999999999876
No 155
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.7e-37 Score=337.25 Aligned_cols=250 Identities=23% Similarity=0.380 Sum_probs=200.6
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
..|.+.+.||+|+||.||+++.. +++.||+|+++.........+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 45566789999999999999886 68999999998665445567899999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE---CCCCcEEEEeecCcccccC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl---~~~~~vkL~DFGla~~~~~ 754 (927)
++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++....
T Consensus 89 ~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 89 SGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999998843 35688999999999999999999998 99999999999999 7889999999999875432
Q ss_pred CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.... .++... ...
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~i----~~~~~~--~~~ 228 (304)
T 2jam_A 162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES----KLFEKI----KEGYYE--FES 228 (304)
T ss_dssp B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHH----HHCCCC--CCT
T ss_pred C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHH----HcCCCC--CCc
Confidence 2 223345899999999999989999999999999999999999999754421 111111 111110 011
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... ......+.+++.+|++.+|++||++.|++++
T Consensus 229 ~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 PFW----DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTT----TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111 1223468899999999999999999999875
No 156
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.4e-37 Score=342.75 Aligned_cols=260 Identities=23% Similarity=0.403 Sum_probs=207.4
Q ss_pred HHHHhccccccCceEEEEEEEC------CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
.+.+.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++...+..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 4556789999999999999765 367899999875433 334568899999999999999999999999999999
Q ss_pred EEEeccCCchhhhcccccc------cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEee
Q 002409 673 VYEFMHNGTLKEHLYGTLT------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 746 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DF 746 (927)
||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Df 182 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 182 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcC
Confidence 9999999999999864321 114568899999999999999999998 9999999999999999999999999
Q ss_pred cCcccccCCCCc-eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhc
Q 002409 747 GLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 747 Gla~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
|+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...+ .
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~----~ 254 (322)
T 1p4o_A 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVLRFV----M 254 (322)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH----HHHHHH----H
T ss_pred ccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH----HHHHHH----H
Confidence 999755432221 1223346889999999998899999999999999999999 88998754321 122211 1
Q ss_pred cCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 825 SGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 825 ~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
.+.... .+......+.+++.+|++.+|++||++.|++++|++++..
T Consensus 255 ~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 255 EGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp TTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred cCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 111111 1112234688999999999999999999999999987653
No 157
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3e-37 Score=373.14 Aligned_cols=249 Identities=27% Similarity=0.412 Sum_probs=199.0
Q ss_pred ccccccCceEEEEEEEC---CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 605 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~---~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
+.||+|+||.||+|.+. .++.||||+++... ....+++.+|+++|++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46789999997643 2335789999999999999999999999964 458899999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc-
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH- 758 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~- 758 (927)
|+|.+++. ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999994 345689999999999999999999998 9999999999999999999999999999865443221
Q ss_pred -eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 759 -VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 759 -~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
......+|+.|+|||++....++.++|||||||++|||++ |+.||...... .+.+. +..+..
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~~~~~----i~~~~~-------- 590 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EVTAM----LEKGER-------- 590 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHH----HHTTCC--------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HHcCCC--------
Confidence 2233446789999999999999999999999999999998 99999765421 12221 111211
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
...+.....++.+++.+|++.+|++||++.+|++.|+++..
T Consensus 591 -~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 591 -MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11122233578899999999999999999999999998764
No 158
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.9e-37 Score=345.12 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=198.9
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEEe
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
..|.+.+.||+|+||.||+++.+ +++.||||++.... ....+|++++.++ +||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 34566789999999999999886 68899999997543 2345788888888 799999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC----CcEEEEeecCcccc
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKFA 752 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~----~~vkL~DFGla~~~ 752 (927)
+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+..+ +.+||+|||+++..
T Consensus 98 ~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 98 MKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999998843 35689999999999999999999998 99999999999998543 35999999999865
Q ss_pred cCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+... +..+.+.
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~~~~~~~----i~~~~~~--- 241 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-DDTPEEILAR----IGSGKFS--- 241 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-TSCHHHHHHH----HHHCCCC---
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-cCCHHHHHHH----HccCCcc---
Confidence 44322 2334568999999999988889999999999999999999999997532 1111122221 1222211
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+...+.......+.+++.+|++.||++||++.|+++|
T Consensus 242 ---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 ---LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111111223468899999999999999999999876
No 159
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.7e-37 Score=336.59 Aligned_cols=254 Identities=24% Similarity=0.332 Sum_probs=202.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceeccee--ecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~--~~~~~~lV~E 675 (927)
|.+.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++|||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 345688999999999999886 68899999997543 334567899999999999999999999874 4678899999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCc-----eecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA-----IIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-----ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
|+++++|.+++.........+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 9999999999965443445589999999999999999999998 6 9999999999999999999999999997
Q ss_pred cccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccc
Q 002409 751 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 830 (927)
Q Consensus 751 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 830 (927)
...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .+... +..+....
T Consensus 165 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~----i~~~~~~~ 235 (279)
T 2w5a_A 165 ILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----ELAGK----IREGKFRR 235 (279)
T ss_dssp HC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHTCCCC
T ss_pred eecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH----HHHHH----Hhhccccc
Confidence 654322 1222346899999999999889999999999999999999999999764411 12221 11222111
Q ss_pred ccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHH
Q 002409 831 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQD 875 (927)
Q Consensus 831 ~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~ 875 (927)
+ +......+.+++.+|++.+|++||++.||++++..
T Consensus 236 -----~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 236 -----I----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----C----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1 11223468899999999999999999999997764
No 160
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=345.12 Aligned_cols=263 Identities=19% Similarity=0.213 Sum_probs=196.0
Q ss_pred HHHHHhccccccCceEEEEEEEC----CCcEEEEEEeecCCch-----------hhHhHHHHHHHHhhccCCCccceecc
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNLVQFLGY 663 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~----~g~~VAVK~l~~~~~~-----------~~~~~~~Ei~iL~~l~HpnIv~l~g~ 663 (927)
..|.+.+.||+|+||.||+|+.. .+..+|||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 34566789999999999999986 4678999998765322 12346678889999999999999999
Q ss_pred eee----cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC
Q 002409 664 CQE----EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 739 (927)
Q Consensus 664 ~~~----~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~ 739 (927)
+.. ....++||||+ +++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 987 67889999999 9999999853 33789999999999999999999998 999999999999999887
Q ss_pred --cEEEEeecCcccccCCCC------ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccc
Q 002409 740 --RAKVSDFGLSKFAVDGAS------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 811 (927)
Q Consensus 740 --~vkL~DFGla~~~~~~~~------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~ 811 (927)
.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~- 267 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP- 267 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-
Confidence 999999999975533211 11134569999999999999899999999999999999999999996432111
Q ss_pred cchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHH
Q 002409 812 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDA 876 (927)
Q Consensus 812 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~ 876 (927)
......+..... .+...+..... ......++.+++.+|++.+|++||++.||++.|+++
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 --VAVQTAKTNLLD-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp --HHHHHHHHHHHH-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred --HHHHHHHHhhcc-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 111111111110 01110100000 002234688999999999999999999999999975
No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.2e-37 Score=330.02 Aligned_cols=251 Identities=22% Similarity=0.360 Sum_probs=201.5
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence 4556789999999999999886 68999999987543 334567899999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++++|.+++.. ...+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 88 SGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp TTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred CCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999998843 45689999999999999999999998 999999999999999999999999999975433221
Q ss_pred -ceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 758 -HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 758 -~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
.......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...... ......|.... .. ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~---~~----~~-- 229 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWKEKK---TY----LN-- 229 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT--SHHHHHHHTTC---TT----ST--
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHhhhcc---cc----cC--
Confidence 12234568999999999987665 77899999999999999999999764311 11122221111 00 00
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. ......+.+++.+|++.+|++|||+.|++++
T Consensus 230 ~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 PW----KKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TG----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ch----hhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00 1123467899999999999999999999875
No 162
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.8e-37 Score=357.85 Aligned_cols=245 Identities=24% Similarity=0.397 Sum_probs=201.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|++. +|+.||||++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 456789999999999999986 789999999975421 2245788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 98 VSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999843 45689999999999999999999998 99999999999999999999999999998654432
Q ss_pred CceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+... +..+...
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~~----i~~~~~~------ 234 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----TLFKK----ICDGIFY------ 234 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----HHHHH----HHTTCCC------
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----HHHHH----HhcCCcC------
Confidence 2334569999999999988765 67999999999999999999999765422 11111 1111110
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+......+.+++.+|++.||++|||+.|++++
T Consensus 235 ----~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 ----TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 011112358899999999999999999999975
No 163
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.6e-37 Score=334.20 Aligned_cols=249 Identities=30% Similarity=0.452 Sum_probs=196.1
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeec-CeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-GRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~-~~~~lV~E~~~~ 679 (927)
+.+.+.||+|+||.||+++.. ++.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||+++
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 99 (278)
T 1byg_A 23 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 99 (278)
T ss_dssp EEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred ceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCC
Confidence 456789999999999999886 8999999987543 356789999999999999999999987554 578999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
++|.+++... ....+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 170 (278)
T 1byg_A 100 GSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 170 (278)
T ss_dssp EEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence 9999998542 223478899999999999999999998 9999999999999999999999999998754332
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+... ...+.. .
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~----~~~~~~-----~---- 233 (278)
T 1byg_A 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVVPR----VEKGYK-----M---- 233 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----GHHHH----HTTTCC-----C----
T ss_pred ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHH----HhcCCC-----C----
Confidence 122357889999999998899999999999999999998 99999765421 12211 111110 1
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
..+......+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 1112233468899999999999999999999999998754
No 164
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.2e-37 Score=343.73 Aligned_cols=264 Identities=19% Similarity=0.209 Sum_probs=190.6
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
.|.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 3556789999999999999866 688999999975432 2245678999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE-----CCCCcEEEEeecCccc
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL-----DKHMRAKVSDFGLSKF 751 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl-----~~~~~vkL~DFGla~~ 751 (927)
++ |+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 115 ~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 115 AE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred CC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 97 599988843 34589999999999999999999998 99999999999999 4556699999999986
Q ss_pred ccCCCCceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccC----
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG---- 826 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~---- 826 (927)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+.+.........
T Consensus 187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhh
Confidence 543222 22334589999999999874 589999999999999999999999976542221111111100000000
Q ss_pred --------CcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 827 --------DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 827 --------~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.........+..........++.+++.+|++.||++|||+.|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000000000000011123567899999999999999999999874
No 165
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=342.97 Aligned_cols=241 Identities=23% Similarity=0.342 Sum_probs=198.8
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--------hhhHhHHHHHHHHhhccCCCccceecceeecCe
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 669 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--------~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~ 669 (927)
..|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+.+.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 34556789999999999999865 688999999976532 123467889999999999999999999999999
Q ss_pred EEEEEEeccCC-chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecC
Q 002409 670 SVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 748 (927)
Q Consensus 670 ~~lV~E~~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGl 748 (927)
.++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 99999999777 99988843 45689999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 749 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 749 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ...
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~---------- 238 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVE---------- 238 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTT----------
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHh----------
Confidence 986544322 234569999999999988776 7889999999999999999999964320 000
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..... +......+.+++.+|++.+|++|||+.|++++
T Consensus 239 ------~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 ------AAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ------TCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ------hccCC--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 01122368899999999999999999999987
No 166
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.2e-37 Score=360.90 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=202.7
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 604 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.||+|+||.||+++.+ +|+.||||++..... .....+..|++++++++||||+++++++...+..++||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 467999999999999986 689999999975422 2345688999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++.........+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-K 345 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-C
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-c
Confidence 999999866544456799999999999999999999998 999999999999999999999999999986544322 2
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCc
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDE 839 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 839 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.+.+.. +.. .
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~----~~~----------~ 411 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE----QAV----------T 411 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH----CCC----------C
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh----ccc----------C
Confidence 23457999999999999999999999999999999999999999765322111222221111 110 1
Q ss_pred cCHHHHHHHHHHHhhhcCCCCCCCCcH-----HHHHHH
Q 002409 840 YDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 872 (927)
Q Consensus 840 ~~~~~~~~l~~L~~~Cl~~dP~~RPsm-----~eV~~~ 872 (927)
++......+.+++.+|++.+|++||++ .||.+|
T Consensus 412 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 412 YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 111223467899999999999999975 666654
No 167
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=342.67 Aligned_cols=252 Identities=18% Similarity=0.161 Sum_probs=202.0
Q ss_pred HHHHhccccccCceEEEEEE------ECCCcEEEEEEeecCCchhhHhHHHHHHHHhhcc---CCCccceecceeecCeE
Q 002409 600 TKMLEKKIGSGGFGVVYYGK------LKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRS 670 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~------~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~---HpnIv~l~g~~~~~~~~ 670 (927)
.+.+.+.||+|+||.||+|. ..+++.||||+++... ..++..|++++++++ |+||+++++++...+..
T Consensus 66 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 66 LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp EEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred EEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 34556889999999999994 3468899999987543 456777888877776 99999999999999999
Q ss_pred EEEEEeccCCchhhhcccccc-cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC-----------C
Q 002409 671 VLVYEFMHNGTLKEHLYGTLT-HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----------H 738 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~-----------~ 738 (927)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccccc
Confidence 999999999999999964322 345699999999999999999999998 9999999999999998 8
Q ss_pred CcEEEEeecCcccccC-CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhH
Q 002409 739 MRAKVSDFGLSKFAVD-GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 817 (927)
Q Consensus 739 ~~vkL~DFGla~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~ 817 (927)
+.+||+|||+++.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----- 294 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----- 294 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-----
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-----
Confidence 9999999999975432 2233445567999999999999999999999999999999999999999654311100
Q ss_pred HHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCC-CcHHHHHHHHHHHHHH
Q 002409 818 WAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMR-PSISEVLKDIQDAIVI 879 (927)
Q Consensus 818 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~R-Psm~eV~~~L~~~~~~ 879 (927)
++..+.... ....+.+++..|++.+|.+| |++.++.+.|++.+..
T Consensus 295 --------------~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 --------------PEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --------------ECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------------echhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 011111111 12356688899999999988 5889999999988764
No 168
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.4e-37 Score=343.52 Aligned_cols=264 Identities=22% Similarity=0.326 Sum_probs=198.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 106 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence 445689999999999999886 588999999865432 23456889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 ~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 107 DHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp SEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988763 234689999999999999999999998 99999999999999999999999999997554322
Q ss_pred ceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHH------------hhh-
Q 002409 758 HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK------------LHI- 823 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~------------~~~- 823 (927)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+..... ...
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 222344689999999999775 789999999999999999999999976542222111111100 000
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
....+...................+.+++.+|++.||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0001111111111011111234578999999999999999999999986
No 169
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3e-37 Score=347.83 Aligned_cols=267 Identities=23% Similarity=0.283 Sum_probs=201.4
Q ss_pred HHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-----CCCccceecceeecC
Q 002409 595 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----HRNLVQFLGYCQEEG 668 (927)
Q Consensus 595 ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-----HpnIv~l~g~~~~~~ 668 (927)
++....|.+.++||+|+||.||+|+.. +++.||||+++.. ....+.+..|++++++++ ||||+++++++...+
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 333445667889999999999999885 6889999998743 334566788999999986 999999999999999
Q ss_pred eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC-----------
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK----------- 737 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~----------- 737 (927)
..++||||+ +++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred eeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchh
Confidence 999999999 89999998543 234588999999999999999999998 9999999999999975
Q ss_pred --------------CCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcc
Q 002409 738 --------------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 803 (927)
Q Consensus 738 --------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~ 803 (927)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 789999999999854332 22346899999999999999999999999999999999999999
Q ss_pred cccccccccchhhHHHHh-------hhccCCcccccC-CcccC--------------------ccCHHHHHHHHHHHhhh
Q 002409 804 SNEKFGANCRNIVQWAKL-------HIESGDIQGIID-PSLLD--------------------EYDIQSMWKIEEKALMC 855 (927)
Q Consensus 804 ~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~d-~~l~~--------------------~~~~~~~~~l~~L~~~C 855 (927)
......+....+...... ..........++ ..+.. .+.......+.+++.+|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 339 (360)
T 3llt_A 260 RTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSI 339 (360)
T ss_dssp CCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHH
Confidence 754422111111110000 000000000000 00000 00000114677999999
Q ss_pred cCCCCCCCCcHHHHHHH
Q 002409 856 VLPHGHMRPSISEVLKD 872 (927)
Q Consensus 856 l~~dP~~RPsm~eV~~~ 872 (927)
++.||++|||+.|++++
T Consensus 340 L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 340 LQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCSSGGGSCCHHHHTTS
T ss_pred hcCChhhCCCHHHHhcC
Confidence 99999999999999864
No 170
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.8e-36 Score=345.48 Aligned_cols=247 Identities=21% Similarity=0.253 Sum_probs=188.5
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhh-ccCCCccceecceee----cCeEEEEEEec
Q 002409 604 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSR-IHHRNLVQFLGYCQE----EGRSVLVYEFM 677 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~-l~HpnIv~l~g~~~~----~~~~~lV~E~~ 677 (927)
.+.||+|+||+||+++.. +++.||||++.. ...+.+|++++.+ .+||||+++++++.. ....++||||+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 368999999999999876 688999999863 2456788888754 589999999998865 56789999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC---CCcEEEEeecCcccccC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~---~~~vkL~DFGla~~~~~ 754 (927)
++|+|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 142 ~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 142 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred CCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 999999999643 234689999999999999999999998 9999999999999998 78999999999985543
Q ss_pred CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+. .+.... -.+
T Consensus 217 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~~~-~~~ 289 (400)
T 1nxk_A 217 HN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQYEF-PNP 289 (400)
T ss_dssp ------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCCCC-CTT
T ss_pred CC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcccC-CCc
Confidence 22 22345689999999999999999999999999999999999999976542221111212111 111100 000
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. .....++.+++.+|++.||++|||+.|++++
T Consensus 290 -~~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 -EW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -TT----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 1123468899999999999999999999987
No 171
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.7e-37 Score=361.69 Aligned_cols=250 Identities=28% Similarity=0.374 Sum_probs=203.7
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++|++++||||+++++++.+.+..++||||+
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~ 266 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 266 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence 34678999999999999886 68999999997542 223456889999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~- 340 (576)
T 2acx_A 267 NGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 340 (576)
T ss_dssp CSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc-
Confidence 999999998643 234589999999999999999999998 99999999999999999999999999998654432
Q ss_pred ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCccc
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLL 837 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 837 (927)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.+.+.. ..
T Consensus 341 -~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~----~~---------- 405 (576)
T 2acx_A 341 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----VP---------- 405 (576)
T ss_dssp -CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH----CC----------
T ss_pred -cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc----cc----------
Confidence 223457999999999999999999999999999999999999999765422222222222111 10
Q ss_pred CccCHHHHHHHHHHHhhhcCCCCCCCC-----cHHHHHHH
Q 002409 838 DEYDIQSMWKIEEKALMCVLPHGHMRP-----SISEVLKD 872 (927)
Q Consensus 838 ~~~~~~~~~~l~~L~~~Cl~~dP~~RP-----sm~eV~~~ 872 (927)
..++......+.+++.+|++.||++|| ++.||++|
T Consensus 406 ~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 011112234688999999999999999 88999876
No 172
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=9.7e-37 Score=355.81 Aligned_cols=260 Identities=22% Similarity=0.288 Sum_probs=192.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceeec------CeEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~------~~~~ 671 (927)
|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+|++++||||+++++++... ...+
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 455788999999999999876 6889999999754 333456788999999999999999999998654 4579
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||++++ |.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 144 lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 144 LVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999764 555552 2378899999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHH-----------
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK----------- 820 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~----------- 820 (927)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.+...
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 5432 223445699999999999999999999999999999999999999976542221111111100
Q ss_pred ----hhhcc------CCcccccCCcccC---ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 821 ----LHIES------GDIQGIIDPSLLD---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 821 ----~~~~~------~~~~~~~d~~l~~---~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..... ..+...+...+.. .........+.+|+.+||+.||++|||+.|+++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000001000000 0011124568999999999999999999999986
No 173
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-37 Score=352.50 Aligned_cols=263 Identities=24% Similarity=0.374 Sum_probs=188.2
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhcc-CCCccceecceeecC--eEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEG--RSVLV 673 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~~~~--~~~lV 673 (927)
.|.+.+.||+|+||.||+|... +++.||||++... .......+.+|+.+++++. ||||+++++++...+ ..++|
T Consensus 10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv 89 (388)
T 3oz6_A 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89 (388)
T ss_dssp TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence 4456789999999999999875 6899999998643 2334566789999999997 999999999997544 68999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccccc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~ 753 (927)
||||+ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 90 FDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred ecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99997 589888843 4688899999999999999999998 99999999999999999999999999998543
Q ss_pred CC--------------------CCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCccccccccccc
Q 002409 754 DG--------------------ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 812 (927)
Q Consensus 754 ~~--------------------~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~ 812 (927)
.. .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 1112233569999999999976 67899999999999999999999999765422222
Q ss_pred chhhHHHHhhhccCCccccc------------------CCcccCcc------------CHHHHHHHHHHHhhhcCCCCCC
Q 002409 813 RNIVQWAKLHIESGDIQGII------------------DPSLLDEY------------DIQSMWKIEEKALMCVLPHGHM 862 (927)
Q Consensus 813 ~~l~~~~~~~~~~~~~~~~~------------------d~~l~~~~------------~~~~~~~l~~L~~~Cl~~dP~~ 862 (927)
..+....... ....+..+- .......+ .......+.+|+.+|++.||++
T Consensus 241 ~~i~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 241 ERIIGVIDFP-SNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHCCC-CHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHhcCCC-CHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 1221110000 000000000 00000000 0012346889999999999999
Q ss_pred CCcHHHHHHH
Q 002409 863 RPSISEVLKD 872 (927)
Q Consensus 863 RPsm~eV~~~ 872 (927)
|||+.|+++|
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999987
No 174
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.1e-37 Score=349.46 Aligned_cols=267 Identities=20% Similarity=0.244 Sum_probs=199.9
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceee------------
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------------ 666 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~------------ 666 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++.... ....+|++++++++||||+++++++..
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 3456789999999999999875 78999999987542 223479999999999999999999843
Q ss_pred --------------------------cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCC
Q 002409 667 --------------------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV 720 (927)
Q Consensus 667 --------------------------~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~ 720 (927)
....++||||++ |+|.+.+.........+++..+..++.|+++||+|||++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 160 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-- 160 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 334789999998 588888765545567799999999999999999999998
Q ss_pred CceecCCCCCCCeEEC-CCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHh
Q 002409 721 PAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELIS 798 (927)
Q Consensus 721 ~~ivHrDLkp~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~ellt 798 (927)
+|+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||++|||++
T Consensus 161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 999999999999998 688999999999986544322 2334589999999998764 58999999999999999999
Q ss_pred CCCcccccccccccchhhHHHHh-----------hhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHH
Q 002409 799 GQEAISNEKFGANCRNIVQWAKL-----------HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSIS 867 (927)
Q Consensus 799 G~~p~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~ 867 (927)
|+.||......+....++..... ...+..+...........++......+.+++.+|++.+|++|||+.
T Consensus 238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 317 (383)
T 3eb0_A 238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY 317 (383)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 99999765422222222211100 0000111111111111112223345689999999999999999999
Q ss_pred HHHHH--HHHH
Q 002409 868 EVLKD--IQDA 876 (927)
Q Consensus 868 eV~~~--L~~~ 876 (927)
|+++| ++++
T Consensus 318 e~l~hp~f~~~ 328 (383)
T 3eb0_A 318 EAMAHPFFDHL 328 (383)
T ss_dssp HHHTSGGGHHH
T ss_pred HHhcCHHHHHH
Confidence 99976 5544
No 175
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1e-36 Score=333.40 Aligned_cols=246 Identities=21% Similarity=0.345 Sum_probs=201.0
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+++.. +++.+|+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence 345688999999999999987 57889999987542 23456788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++++|.+++. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 97 CRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp CTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999874 245689999999999999999999998 99999999999999999999999999998654322
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+. .. ....+.. .+
T Consensus 170 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~----~~~~~~~------~~ 234 (294)
T 2rku_A 170 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YL----RIKKNEY------SI 234 (294)
T ss_dssp -CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HH----HHHTTCC------CC
T ss_pred -cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HH----HHhhccC------CC
Confidence 222345689999999999988899999999999999999999999976442111 11 1111111 01
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. .....+.+++.+|++.+|++||++.|++++
T Consensus 235 ~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 PK----HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cc----ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11 122467899999999999999999999876
No 176
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=342.68 Aligned_cols=262 Identities=14% Similarity=0.202 Sum_probs=202.8
Q ss_pred HHHHhccccccCceEEEEEEECC---------CcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccc-----------
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQ----------- 659 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~---------g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~----------- 659 (927)
.|.+.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 34567899999999999998864 788999998743 46889999999999999998
Q ss_pred ----eecceee-cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeE
Q 002409 660 ----FLGYCQE-EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 734 (927)
Q Consensus 660 ----l~g~~~~-~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NIL 734 (927)
+++++.. .+..++||||+ +++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 4556655 67889999999 99999999643 246799999999999999999999998 9999999999999
Q ss_pred ECCCC--cEEEEeecCcccccCCCCc------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccc
Q 002409 735 LDKHM--RAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 806 (927)
Q Consensus 735 l~~~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~ 806 (927)
++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999755432211 112346999999999999989999999999999999999999999765
Q ss_pred ccccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 807 KFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 807 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
... ...+......... ......+..... ......+.+++.+|++.+|++||++.||++.|++++..
T Consensus 272 ~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 272 LPN--TEDIMKQKQKFVD--KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTC--HHHHHHHHHHHHH--SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcC--HHHHHHHHHhccC--Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 311 1122222111111 111111111110 01124688999999999999999999999999998754
No 177
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.6e-36 Score=331.20 Aligned_cols=245 Identities=28% Similarity=0.438 Sum_probs=194.8
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceee----cCeEEEEE
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 674 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~----~~~~~lV~ 674 (927)
.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++||
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 108 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence 45678999999999999876 57889999987542 3345678999999999999999999998865 35689999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCc--eecCCCCCCCeEEC-CCCcEEEEeecCccc
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLD-KHMRAKVSDFGLSKF 751 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDLkp~NILl~-~~~~vkL~DFGla~~ 751 (927)
||+++|+|.+++.. ...+++..++.++.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++..
T Consensus 109 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999843 35688999999999999999999998 7 99999999999998 789999999999975
Q ss_pred ccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
.... ......||+.|+|||.+. +.++.++|||||||++|||++|+.||...... ..+... ...+....
T Consensus 182 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~~----~~~~~~~~- 249 (290)
T 1t4h_A 182 KRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA---AQIYRR----VTSGVKPA- 249 (290)
T ss_dssp CCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---HHHHHH----HTTTCCCG-
T ss_pred cccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH---HHHHHH----HhccCCcc-
Confidence 4332 223456999999999876 56899999999999999999999999754311 111111 11111111
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..+......+.+++.+|++.+|++|||+.|++++
T Consensus 250 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 -------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1111122468899999999999999999999875
No 178
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-37 Score=351.07 Aligned_cols=240 Identities=13% Similarity=0.127 Sum_probs=185.2
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecC---CchhhHhHHHHH---HHHhhccCCCcccee-------cceeec
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEV---TLLSRIHHRNLVQFL-------GYCQEE 667 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~---~~~~~~~~~~Ei---~iL~~l~HpnIv~l~-------g~~~~~ 667 (927)
.+.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+ +++++++||||++++ +++...
T Consensus 76 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~ 155 (377)
T 3byv_A 76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 155 (377)
T ss_dssp EEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECT
T ss_pred EEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhcc
Confidence 34688999999999999864 6899999999743 333457788999 555566899999998 444443
Q ss_pred C-----------------eEEEEEEeccCCchhhhccccc---ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCC
Q 002409 668 G-----------------RSVLVYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRD 727 (927)
Q Consensus 668 ~-----------------~~~lV~E~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrD 727 (927)
+ ..++||||+ +|+|.+++.... .....+++..++.|+.|++.||+|||++ +|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 231 (377)
T 3byv_A 156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTY 231 (377)
T ss_dssp TSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 3 278999999 689999986421 1123455688889999999999999998 999999
Q ss_pred CCCCCeEECCCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccC-----------cCCCccceeeHHHHHHHH
Q 002409 728 LKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-----------QLTDKSDVYSFGVILLEL 796 (927)
Q Consensus 728 Lkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~s~~sDVwSlGvvL~el 796 (927)
|||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 999999999999999999999985322 3334557 999999999887 899999999999999999
Q ss_pred HhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 797 ISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 797 ltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
++|+.||...........+.. . ... ....+.+++.+|++.||++||++.|++++
T Consensus 307 ltg~~Pf~~~~~~~~~~~~~~--------~----------~~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 307 WCADLPITKDAALGGSEWIFR--------S----------CKN----IPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHSSCCC------CCSGGGGS--------S----------CCC----CCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHCCCCCcccccccchhhhhh--------h----------ccC----CCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 999999975442211111100 0 011 12468899999999999999999999975
No 179
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-36 Score=340.16 Aligned_cols=246 Identities=21% Similarity=0.337 Sum_probs=201.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+++.. +++.+|+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 122 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 122 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEec
Confidence 445789999999999999887 47889999987542 23456788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 123 ~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 123 CRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 999999998742 45689999999999999999999998 99999999999999999999999999998654322
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... ...+.. .+
T Consensus 196 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~----~~~~~~------~~ 260 (335)
T 2owb_A 196 -ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYLR----IKKNEY------SI 260 (335)
T ss_dssp -CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHH----HHHTCC------CC
T ss_pred -ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH----HHHH----HhcCCC------CC
Confidence 22234568999999999999899999999999999999999999997544211 1111 111111 01
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... ....+.+++.+|++.||++||++.|++++
T Consensus 261 ~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 PKH----INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CTT----SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred Ccc----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 22357899999999999999999999875
No 180
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-36 Score=350.28 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=189.5
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--------chhhHhHHHHHHHHhhccCCCccceecceeecCe
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--------YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR 669 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--------~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~ 669 (927)
..|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+++|++++||||+++++++.. +.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence 34566789999999999999876 57899999987532 1122358899999999999999999999754 55
Q ss_pred EEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC---CcEEEEee
Q 002409 670 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDF 746 (927)
Q Consensus 670 ~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~---~~vkL~DF 746 (927)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 214 ~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp EEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred eEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 799999999999999884 345689999999999999999999998 99999999999999754 45999999
Q ss_pred cCcccccCCCCceeeeeccCCCccCcccccc---CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 747 GLSKFAVDGASHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 747 Gla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
|+++..... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... .+....
T Consensus 287 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~i---- 357 (419)
T 3i6u_A 287 GHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQI---- 357 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC---CHHHHH----
T ss_pred ccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH---HHHHHH----
Confidence 999865432 22344569999999999863 567889999999999999999999997543221 111111
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..+.... .+... ......+.+++.+|++.+|++||++.|+++|
T Consensus 358 ~~~~~~~--~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TSGKYNF--IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HTTCCCC--CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hcCCCCC--Cchhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111100 00000 1123468899999999999999999999986
No 181
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.8e-37 Score=340.94 Aligned_cols=263 Identities=25% Similarity=0.393 Sum_probs=204.8
Q ss_pred HHHHHHhccccccCceEEEEEEEC------CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeE
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 670 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~------~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~ 670 (927)
...+.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 344567789999999999999842 56789999997543 34456789999999999999999999999999999
Q ss_pred EEEEEeccCCchhhhcccccc---cccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC---CCcEEEE
Q 002409 671 VLVYEFMHNGTLKEHLYGTLT---HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVS 744 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~---~~~vkL~ 744 (927)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999965421 224589999999999999999999998 9999999999999994 4569999
Q ss_pred eecCcccccCCCC-ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhh
Q 002409 745 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 745 DFGla~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...+..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~- 260 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTS- 260 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHHT-
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH----HHHHHHhc-
Confidence 9999975433221 12233457899999999998899999999999999999998 99999754311 22222211
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
+... ..+......+.+++.+|++.+|++||++.||+++|+.+....
T Consensus 261 ---~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 261 ---GGRM---------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp ---TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ---CCCC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1110 011122346889999999999999999999999999886543
No 182
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=342.41 Aligned_cols=262 Identities=21% Similarity=0.299 Sum_probs=192.7
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch-hhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 83 (324)
T 3mtl_A 5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD- 83 (324)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence 45678999999999999986 6889999998754322 22345679999999999999999999999999999999997
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 84 ~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~ 156 (324)
T 3mtl_A 84 KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 156 (324)
T ss_dssp EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cc
Confidence 5888887532 34688999999999999999999998 99999999999999999999999999997543322 22
Q ss_pred eeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC----
Q 002409 760 SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP---- 834 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~---- 834 (927)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.+..... ...........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP-TEETWPGILSNEEFK 235 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC-CTTTSTTGGGCHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC-ChHhchhhhcchhhc
Confidence 233458999999999876 568999999999999999999999997654222221221111100 00001110000
Q ss_pred -----cccC----ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 -----SLLD----EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 -----~l~~----~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.... .........+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 0011223467899999999999999999999986
No 183
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=329.49 Aligned_cols=248 Identities=24% Similarity=0.383 Sum_probs=195.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccCCchh
Q 002409 605 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 683 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL~ 683 (927)
..||+|+||.||+|+.. +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 47999999999999875 67899999998766555678999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC-CCcEEEEeecCcccccCCCCceeee
Q 002409 684 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVSSI 762 (927)
Q Consensus 684 ~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~~ 762 (927)
+++.... ....+++..+..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++...... .....
T Consensus 108 ~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 182 (295)
T 2clq_A 108 ALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTET 182 (295)
T ss_dssp HHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Ccccc
Confidence 9986432 234567888999999999999999998 9999999999999987 8999999999997654322 12234
Q ss_pred eccCCCccCccccccCc--CCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCcc
Q 002409 763 VRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEY 840 (927)
Q Consensus 763 ~~gt~~Y~aPE~~~~~~--~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 840 (927)
..||+.|+|||.+.... ++.++|||||||++|||++|+.||........ .... .... . ..+.+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~--~~~~--~-----~~~~~---- 247 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA--AMFK--VGMF--K-----VHPEI---- 247 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH--HHHH--HHHH--C-----CCCCC----
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH--HHHh--hccc--c-----ccccc----
Confidence 46899999999997643 78899999999999999999999975431110 1111 0000 0 01111
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 841 DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 841 ~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+......+.+++.+|++.+|++||++.|++++
T Consensus 248 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 248 PESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11223468899999999999999999999875
No 184
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-36 Score=330.31 Aligned_cols=244 Identities=24% Similarity=0.367 Sum_probs=200.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 95 (284)
T 2vgo_A 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF 95 (284)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEe
Confidence 445789999999999999886 57789999986532 22246788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 96 APRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 999999998843 34688999999999999999999998 99999999999999999999999999987543321
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+. .. .+..... .+
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~----~~~~~~~------~~ 231 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET----HR----RIVNVDL------KF 231 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HH----HHHTTCC------CC
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH----HH----HHhcccc------CC
Confidence 2334689999999999999999999999999999999999999975442111 11 1111110 11
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+......+.+++.+|++.+|++||++.|++++
T Consensus 232 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 ----PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 11122467899999999999999999999886
No 185
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=8.2e-37 Score=352.18 Aligned_cols=262 Identities=23% Similarity=0.266 Sum_probs=194.0
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeec------CeEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSVLV 673 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~------~~~~lV 673 (927)
|.+.+.||+|+||.||+|++. +++.||||++.... +...+|+++|++++||||+++++++... ...++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 345688999999999999986 58999999986542 2345799999999999999999988542 236799
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC-CcEEEEeecCcccc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFA 752 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~-~~vkL~DFGla~~~ 752 (927)
|||+++ +|.+.+.........+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 66666644333456789999999999999999999998 99999999999999965 67899999999865
Q ss_pred cCCCCceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHh----hhc--c
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL----HIE--S 825 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~----~~~--~ 825 (927)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....++..... .+. .
T Consensus 208 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 208 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp CTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred ccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 44322 2234689999999998764 7899999999999999999999999765422211122211000 000 0
Q ss_pred CCcccccCCccc-----CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 826 GDIQGIIDPSLL-----DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 826 ~~~~~~~d~~l~-----~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
....+..-+.+. ..+......++.+|+.+|++.||++||++.|+++|
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 011111111111 11122233578999999999999999999999976
No 186
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-36 Score=340.12 Aligned_cols=266 Identities=21% Similarity=0.230 Sum_probs=196.9
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch-----hhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~-----~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 34566789999999999999876 5899999998753221 13468899999999999999999999999999999
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
||||+++ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 90 v~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999986 888877532 34578888999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccC-----
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG----- 826 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~----- 826 (927)
.... .......||+.|+|||.+.+. .++.++|||||||++|||++|..||......+....+...........
T Consensus 163 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 163 GSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred cCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence 4332 223345689999999998754 588899999999999999999999876542222212221111000000
Q ss_pred CcccccCCcccCccC-----HHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 827 DIQGIIDPSLLDEYD-----IQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 827 ~~~~~~d~~l~~~~~-----~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...+.+........+ ......+.+++.+|++.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000000001 1223578999999999999999999999886
No 187
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.9e-36 Score=331.28 Aligned_cols=247 Identities=25% Similarity=0.408 Sum_probs=202.8
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++......++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 445688999999999999875 68899999997553 3345778999999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 758 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 758 (927)
+++|.+++. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 104 ~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 104 GGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp TEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred CCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 999999884 24689999999999999999999998 99999999999999999999999999997654332 1
Q ss_pred eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccC
Q 002409 759 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLD 838 (927)
Q Consensus 759 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 838 (927)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ...... ..+.. +.+..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~----~~~~~-----~~~~~ 241 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLI----PKNNP-----PTLEG 241 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHH----HHSCC-----CCCCS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH----HHHHHh----hcCCC-----CCCcc
Confidence 223456899999999999999999999999999999999999999754311 111111 11111 11112
Q ss_pred ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 002409 839 EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 873 (927)
Q Consensus 839 ~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L 873 (927)
.+ ...+.+++.+|++.+|++|||+.|++++.
T Consensus 242 ~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 NY----SKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SC----CHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred cc----CHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 22 23588999999999999999999999864
No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.6e-36 Score=354.18 Aligned_cols=250 Identities=26% Similarity=0.387 Sum_probs=197.4
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
..|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45667889999999999999986 68899999997653 2335678999999999999999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC---CcEEEEeecCcccc
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKFA 752 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~---~~vkL~DFGla~~~ 752 (927)
|+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.. +.+||+|||+++..
T Consensus 117 ~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 117 CYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999988843 45688999999999999999999998 99999999999999764 55999999999865
Q ss_pred cCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
.... ......||+.|+|||++. +.++.++||||+||++|||++|+.||...... .+...+. .+... .
T Consensus 190 ~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~----~~~~~--~ 256 (494)
T 3lij_A 190 ENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ----EILRKVE----KGKYT--F 256 (494)
T ss_dssp BTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HTCCC--C
T ss_pred CCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH----hCCCC--C
Confidence 4332 233456999999999876 57999999999999999999999999765422 1222111 11110 0
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+..... .....+.+++.+|++.+|++|||+.|++++
T Consensus 257 ~~~~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 DSPEWK----NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CSGGGT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred Cchhcc----cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 101111 122468899999999999999999999987
No 189
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.8e-36 Score=353.26 Aligned_cols=251 Identities=27% Similarity=0.365 Sum_probs=200.5
Q ss_pred HHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEE
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 674 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~ 674 (927)
...|.+.+.||+|+||+||+|+.. +++.||||++... .......+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 345677899999999999999886 6899999998643 2234567899999999999999999999999999999999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC---CCCcEEEEeecCccc
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKF 751 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~---~~~~vkL~DFGla~~ 751 (927)
||+.+|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999988843 45689999999999999999999998 999999999999995 456799999999986
Q ss_pred ccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .+...+ ..+....
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i----~~~~~~~- 241 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILKRV----ETGKYAF- 241 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH----HHTCCCS-
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH----HhCCCCC-
Confidence 54322 2234569999999999865 5899999999999999999999999764421 122211 1111110
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+.... ......+.+++.+|++.+|++|||+.|++++
T Consensus 242 -~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 -DLPQW----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -CSGGG----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -CCccc----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 1123468899999999999999999999986
No 190
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-36 Score=345.37 Aligned_cols=262 Identities=22% Similarity=0.264 Sum_probs=194.8
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecC------eEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSVLVY 674 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~------~~~lV~ 674 (927)
|.+.+.||+|+||.||+|++..+..+|+|++.... ....+|++++++++||||+++++++...+ ..++||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 45678999999999999999878889999886442 22347999999999999999999986543 378999
Q ss_pred EeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC-CCCcEEEEeecCccccc
Q 002409 675 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 675 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~-~~~~vkL~DFGla~~~~ 753 (927)
||++++.+ +.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++ .++.+||+|||+++...
T Consensus 118 e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 118 EYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp ECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99987543 33332223356789999999999999999999998 999999999999999 78999999999998654
Q ss_pred CCCCceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHH-----------h
Q 002409 754 DGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-----------L 821 (927)
Q Consensus 754 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~-----------~ 821 (927)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+..... .
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 4332 2234589999999998764 589999999999999999999999976542222222221110 0
Q ss_pred hhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 822 HIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 822 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
......+...-...+...+......++.+++.+|++.||++|||+.|+++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000111111111111111222234578999999999999999999999987
No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.5e-36 Score=354.54 Aligned_cols=251 Identities=27% Similarity=0.388 Sum_probs=203.3
Q ss_pred HHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEE
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 673 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV 673 (927)
...|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 456677899999999999999887 78999999997542 23456789999999999999999999999999999999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE---CCCCcEEEEeecCcc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSK 750 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl---~~~~~vkL~DFGla~ 750 (927)
|||+.+|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999998843 45689999999999999999999998 99999999999999 567899999999998
Q ss_pred cccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccc
Q 002409 751 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 830 (927)
Q Consensus 751 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 830 (927)
...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... .+...+. .+...-
T Consensus 178 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~----~~~~~~ 246 (484)
T 3nyv_A 178 HFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY----DILKKVE----KGKYTF 246 (484)
T ss_dssp HBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HCCCCC
T ss_pred Eccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHH----cCCCCC
Confidence 654432 2233469999999999865 6899999999999999999999999765421 2222111 111110
Q ss_pred ccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 831 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 831 ~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+.... ......+.+++.+|++.+|++|||+.|+++|
T Consensus 247 --~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 --ELPQW----KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --CSGGG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00000 1223468899999999999999999999876
No 192
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.6e-36 Score=326.66 Aligned_cols=245 Identities=24% Similarity=0.413 Sum_probs=192.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence 445788999999999999987 78999999987542 22345788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++++|.+++.. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 93 VSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred cCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999999843 34688999999999999999999998 99999999999999999999999999997654322
Q ss_pred CceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... .+.+... .+.. .
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~----~~~~------~ 229 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP----TLFKKIR----GGVF------Y 229 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH----HCCC------C
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHHHhh----cCcc------c
Confidence 2233458999999999987665 67999999999999999999999754321 1111111 1110 0
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+ +......+.+++.+|++.+|++|||+.|++++
T Consensus 230 ~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 I----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred C----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 11122468899999999999999999999986
No 193
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.2e-35 Score=336.08 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=199.0
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--------hhhHhHHHHHHHHhhc-cCCCccceecceeecCe
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 669 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--------~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~ 669 (927)
.|.+.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+.+++++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 3444689999999999999986 699999999875431 1134678899999999 79999999999999999
Q ss_pred EEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCc
Q 002409 670 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 749 (927)
Q Consensus 670 ~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla 749 (927)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 175 ~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 9999999999999999843 45689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCceeeeeccCCCccCcccccc------CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 750 KFAVDGASHVSSIVRGTVGYLDPEYYIS------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 750 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+
T Consensus 248 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----~~~~~i---- 317 (365)
T 2y7j_A 248 CHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI----LMLRMI---- 317 (365)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH----
T ss_pred cccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH----HHHHHH----
Confidence 7654332 2234569999999999863 35888999999999999999999999754311 111111
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..+.... ..+ ... .....+.+++.+|++.+|++||++.|++++
T Consensus 318 ~~~~~~~-~~~-~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEGQYQF-SSP-EWD----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHTCCCC-CHH-HHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCCCC-CCc-ccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111100 000 001 112358899999999999999999999875
No 194
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.1e-36 Score=331.93 Aligned_cols=256 Identities=26% Similarity=0.369 Sum_probs=194.4
Q ss_pred HHHHhccccccCceEEEEEEEC--CCc--EEEEEEeecCC---chhhHhHHHHHHHHhhccCCCccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK--DGK--EIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~--~g~--~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~l 672 (927)
.+.+.+.||+|+||.||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++.... .++
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 97 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKM 97 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEE
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-cee
Confidence 3456789999999999999864 233 68999987542 334567899999999999999999999998765 789
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
|+||+++++|.+++... ...+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++..
T Consensus 98 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence 99999999999998542 35688999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCce--eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 753 VDGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 753 ~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
....... .....+|..|+|||.+....++.++||||||+++|||++ |+.||...... .+..... ..+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~~~---~~~~~- 243 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----QILHKID---KEGER- 243 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHHH---TSCCC-
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH----HHHHHHH---ccCCC-
Confidence 4433221 223457889999999998889999999999999999999 99999754421 1222111 11100
Q ss_pred cccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHH
Q 002409 830 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIV 878 (927)
Q Consensus 830 ~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~ 878 (927)
..........+.+++.+|++.+|++||++.|++++|+++..
T Consensus 244 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 244 --------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred --------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 00111223468899999999999999999999999998643
No 195
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-36 Score=351.67 Aligned_cols=192 Identities=24% Similarity=0.368 Sum_probs=150.8
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceee-----cCeEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-----EGRSV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~-----~~~~~ 671 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+++|++++||||+++++++.. ....+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 3556789999999999999876 6889999998654 23345678899999999999999999999843 35789
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+ +|+|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 134 lv~e~~-~~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEECCC-SEEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEecc-ccchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 999998 568988884 345689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC--------------------------ceeeeeccCCCccCcccc-ccCcCCCccceeeHHHHHHHHHhC
Q 002409 752 AVDGAS--------------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISG 799 (927)
Q Consensus 752 ~~~~~~--------------------------~~~~~~~gt~~Y~aPE~~-~~~~~s~~sDVwSlGvvL~elltG 799 (927)
...... .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 542211 112334689999999986 456799999999999999999993
No 196
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.3e-37 Score=335.13 Aligned_cols=252 Identities=24% Similarity=0.315 Sum_probs=185.9
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-h-hhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-Q-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-~-~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
+.+.+.||+|+||.||+|+.. +++.||||+++.... . ..+.+.++...++.++||||+++++++.+.+..++||||+
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (290)
T 3fme_A 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECC
T ss_pred hhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehh
Confidence 445789999999999999875 688999999975432 2 2334455566688899999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
+ |+|.+++.........+++..++.++.|++.||+|||++ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 164 (290)
T 3fme_A 89 D-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV- 164 (290)
T ss_dssp S-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred c-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccccc-
Confidence 7 588888765444567799999999999999999999985 289999999999999999999999999997654322
Q ss_pred ceeeeeccCCCccCcccc----ccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 758 HVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~----~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
......||+.|+|||.+ ....++.++|||||||++|||++|+.||...... ...+... ..... ....
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~----~~~~~-~~~~- 235 (290)
T 3fme_A 165 -AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQV----VEEPS-PQLP- 235 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--HHHHHHH----HHSCC-CCCC-
T ss_pred -cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch--HHHHHHH----hccCC-CCcc-
Confidence 22334589999999996 4567888999999999999999999999753211 1111111 11111 0000
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.......+.+++.+|++.+|++|||+.|++++
T Consensus 236 -------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 236 -------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp -------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 11123468899999999999999999999885
No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.2e-36 Score=337.39 Aligned_cols=265 Identities=19% Similarity=0.268 Sum_probs=197.2
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceee--------cC
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQE--------EG 668 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--------~~ 668 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 3556789999999999999985 789999999865432 234568899999999999999999999876 44
Q ss_pred eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecC
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 748 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGl 748 (927)
..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 68999999975 777766432 34589999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCC---CceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhc
Q 002409 749 SKFAVDGA---SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIE 824 (927)
Q Consensus 749 a~~~~~~~---~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~ 824 (927)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.+.... ..
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~ 249 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS-IT 249 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC-CC
Confidence 98654221 122234568999999999876 56899999999999999999999999765422222122111110 00
Q ss_pred cCCcccc--------cCCcccCccCH-H------HHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 825 SGDIQGI--------IDPSLLDEYDI-Q------SMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 825 ~~~~~~~--------~d~~l~~~~~~-~------~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
....... +.......... + ....+.+++.+|++.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000000 00000000000 0 12357899999999999999999999886
No 198
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.6e-36 Score=341.95 Aligned_cols=264 Identities=22% Similarity=0.301 Sum_probs=199.7
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEec
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
.+.+.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 113 (360)
T 3eqc_A 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113 (360)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECC
Confidence 3445678999999999999887 68899999997653 334567899999999999999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++++|.+++.. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 114 ~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 114 DGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp TTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 99999999843 346889999999999999999999841 7999999999999999999999999998754322
Q ss_pred ceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHH--------hhhccC---
Q 002409 758 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK--------LHIESG--- 826 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~--------~~~~~~--- 826 (927)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+..... .....+
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 12234689999999999999999999999999999999999999975432111000000000 000000
Q ss_pred -----------CcccccC----CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 827 -----------DIQGIID----PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 827 -----------~~~~~~d----~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...+.++ ..............+.+++.+|++.+|++|||+.|+++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000 000000001123468899999999999999999999987
No 199
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.1e-36 Score=344.71 Aligned_cols=274 Identities=22% Similarity=0.284 Sum_probs=204.7
Q ss_pred cccCHHHHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc--------CCCccc
Q 002409 589 HCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH--------HRNLVQ 659 (927)
Q Consensus 589 ~~~~~~ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~--------HpnIv~ 659 (927)
+.+..+++....|.+.++||+|+||.||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||++
T Consensus 27 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~ 105 (397)
T 1wak_A 27 HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ 105 (397)
T ss_dssp CSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred eEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence 344455555556777899999999999999875 5788999999743 334567889999999995 788999
Q ss_pred eeccee----ecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE
Q 002409 660 FLGYCQ----EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL 735 (927)
Q Consensus 660 l~g~~~----~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl 735 (927)
+++++. .....++||||+ +++|.+++... ....+++..++.++.||+.||+|||+++ +|+||||||+|||+
T Consensus 106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll 180 (397)
T 1wak_A 106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL 180 (397)
T ss_dssp EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEE
T ss_pred eecceeecCCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeE
Confidence 999987 556789999999 55666665432 2356899999999999999999999953 89999999999999
Q ss_pred CCCC-------------------------------------------------cEEEEeecCcccccCCCCceeeeeccC
Q 002409 736 DKHM-------------------------------------------------RAKVSDFGLSKFAVDGASHVSSIVRGT 766 (927)
Q Consensus 736 ~~~~-------------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~gt 766 (927)
+.++ .+||+|||+++..... .....||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt 256 (397)
T 1wak_A 181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQT 256 (397)
T ss_dssp CCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSC
T ss_pred eccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCC
Confidence 9775 7999999999865432 2234589
Q ss_pred CCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchh--hHHHHhhhc-------------------c
Q 002409 767 VGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI--VQWAKLHIE-------------------S 825 (927)
Q Consensus 767 ~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l--~~~~~~~~~-------------------~ 825 (927)
+.|+|||++.+..++.++|||||||++|||++|+.||......+..... ......... .
T Consensus 257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 336 (397)
T 1wak_A 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK 336 (397)
T ss_dssp GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCc
Confidence 9999999999999999999999999999999999999754422211111 110000000 0
Q ss_pred CCcccccCCcc---------cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 826 GDIQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 826 ~~~~~~~d~~l---------~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+....+.+..- ....+......+.+|+.+|++.||++|||+.|+++|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00101000000 012245566789999999999999999999999875
No 200
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-36 Score=340.26 Aligned_cols=258 Identities=21% Similarity=0.287 Sum_probs=191.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecC------eEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~------~~~ 671 (927)
|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 445688999999999999875 68999999986432 233567889999999999999999999987653 459
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+ +++|.+++.. ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 999999 7899998843 4688999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhh-------h
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------I 823 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~-------~ 823 (927)
.... .....||+.|+|||++.+ ..++.++||||+||+++||++|+.||......+....+....... +
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~ 253 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 5332 233468999999999887 689999999999999999999999997644221111111110000 0
Q ss_pred ccC-------CcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESG-------DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~-------~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... .+...-...+ ..........+.+++.+|++.||++|||+.|+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 254 QSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp SCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 0000000000 01111223468899999999999999999999986
No 201
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.5e-36 Score=345.96 Aligned_cols=197 Identities=24% Similarity=0.360 Sum_probs=163.6
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceeec-----CeEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~-----~~~~ 671 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+++|++++||||+++++++... ...+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 3456789999999999999876 5788999999754 223456788999999999999999999999766 5789
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+. |+|.+++.. ...+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 9999986 599998843 45689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC---------------------ceeeeeccCCCccCcccc-ccCcCCCccceeeHHHHHHHHHhCCCccc
Q 002409 752 AVDGAS---------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISGQEAIS 804 (927)
Q Consensus 752 ~~~~~~---------------------~~~~~~~gt~~Y~aPE~~-~~~~~s~~sDVwSlGvvL~elltG~~p~~ 804 (927)
...... .......||+.|+|||++ ....++.++||||+||++|||++|..|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 543221 112445699999999986 45679999999999999999998766654
No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.9e-36 Score=328.46 Aligned_cols=264 Identities=22% Similarity=0.276 Sum_probs=196.5
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++...+..++||||+.
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 85 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc
Confidence 34678999999999999886 689999999865432 234678899999999999999999999999999999999997
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCc
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 758 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 758 (927)
++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 86 -~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~ 158 (299)
T 2r3i_A 86 -QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-R 158 (299)
T ss_dssp -EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-B
T ss_pred -CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-c
Confidence 6999988543 234588899999999999999999998 99999999999999999999999999997553322 1
Q ss_pred eeeeeccCCCccCccccccCc-CCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhcc--------CCcc
Q 002409 759 VSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES--------GDIQ 829 (927)
Q Consensus 759 ~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~--------~~~~ 829 (927)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......+....+.......... ....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence 223345899999999998755 7899999999999999999999997654221111111110000000 0000
Q ss_pred cccCCcccCcc---CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 830 GIIDPSLLDEY---DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 830 ~~~d~~l~~~~---~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..+.......+ .......+.+++.+|++.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 01123468899999999999999999999874
No 203
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.8e-36 Score=332.19 Aligned_cols=261 Identities=24% Similarity=0.384 Sum_probs=183.4
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
+.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||++
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 96 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS 96 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCT
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhcc
Confidence 445789999999999999865 68899999886443 2335678899999999999999999999999999999999999
Q ss_pred CCchhhhccccc----ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccC
Q 002409 679 NGTLKEHLYGTL----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 679 ~gsL~~~L~~~~----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 754 (927)
+++|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173 (303)
T ss_dssp TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence 999999985321 1245589999999999999999999998 999999999999999999999999999875543
Q ss_pred CCC----ceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 755 GAS----HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 755 ~~~----~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
... .......||+.|+|||.+.. ..++.++|||||||++|||++|+.||....... ...............
T Consensus 174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~ 249 (303)
T 2vwi_A 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----VLMLTLQNDPPSLET 249 (303)
T ss_dssp --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HHHHHHTSSCCCTTC
T ss_pred CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----HHHHHhccCCCcccc
Confidence 211 11233468999999999876 568999999999999999999999997644211 111111100000001
Q ss_pred cccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 830 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 830 ~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...++.....+ ...+.+++.+|++.+|++||++.|++++
T Consensus 250 ~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 GVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11111122222 2468899999999999999999999975
No 204
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.8e-36 Score=343.47 Aligned_cols=251 Identities=11% Similarity=0.034 Sum_probs=177.6
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhc--cCCCcccee-------cceeec-
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI--HHRNLVQFL-------GYCQEE- 667 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l--~HpnIv~l~-------g~~~~~- 667 (927)
.+.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.+++.+ +||||++++ +++...
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 45688999999999999976 788999999987543 2345677885555554 699988755 333322
Q ss_pred ----------------CeEEEEEEeccCCchhhhcccccccccccCHHHH------HHHHHHHHhHhHHHhhCCCCceec
Q 002409 668 ----------------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKR------LEIAEDAAKGIEYLHTGCVPAIIH 725 (927)
Q Consensus 668 ----------------~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~~~~ivH 725 (927)
...++||||++ |+|.+++... ...+.+..+ +.++.|++.||+|||++ +|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH 217 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH 217 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence 33799999998 8999999643 223344455 67889999999999998 9999
Q ss_pred CCCCCCCeEECCCCcEEEEeecCcccccCCCCceeeeeccCCCccCcccccc--CcCCCccceeeHHHHHHHHHhCCCcc
Q 002409 726 RDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAI 803 (927)
Q Consensus 726 rDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvvL~elltG~~p~ 803 (927)
|||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999985532 1223457799999999987 78999999999999999999999999
Q ss_pred cccccccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 804 SNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 804 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
......... .|.. ......................+.+++.+|++.||++|||+.|++++
T Consensus 294 ~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 294 GLVTPGIKG----SWKR-----PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TBCCTTCTT----CCCB-----CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCcCccccc----chhh-----hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 765421100 0000 00000000111111111233568899999999999999999999875
No 205
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=329.72 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=198.0
Q ss_pred HHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEe
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 676 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~ 676 (927)
...+.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+|+.++++++||||+++++++...+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 334556789999999999999886 58999999997543 346788999999999999999999999999999999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 756 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 756 (927)
+++++|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 106 ~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 106 CGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp CTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred CCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 999999999852 245689999999999999999999998 99999999999999999999999999997654332
Q ss_pred CceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcc
Q 002409 757 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSL 836 (927)
Q Consensus 757 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 836 (927)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..... ...........
T Consensus 180 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~----~~~~~~~~~~~--- 247 (314)
T 3com_A 180 A-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM----RAIFM----IPTNPPPTFRK--- 247 (314)
T ss_dssp S-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHH----HHHSCCCCCSS---
T ss_pred c-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH----HHHHH----HhcCCCcccCC---
Confidence 2 223446899999999999989999999999999999999999999754311 11110 01111000000
Q ss_pred cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 837 LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 837 ~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+......+.+++.+|++.+|++||++.|++++
T Consensus 248 ----~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 248 ----PELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ----GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11123468899999999999999999999875
No 206
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.3e-36 Score=366.47 Aligned_cols=246 Identities=24% Similarity=0.305 Sum_probs=201.0
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC---chhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
+.+.+.||+|+||.||+|+.. +++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++|||
T Consensus 343 f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E 422 (674)
T 3pfq_A 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422 (674)
T ss_dssp EEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred eEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence 445689999999999999876 57889999997542 22345678899999887 79999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+||||+.++++||+|||+++.....
T Consensus 423 ~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 423 YVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred CcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999853 35689999999999999999999998 9999999999999999999999999999854322
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
. .......||+.|+|||++.+..++.++|||||||+||||++|+.||......+....+. .+.+
T Consensus 496 ~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~--------~~~~------- 559 (674)
T 3pfq_A 496 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--------EHNV------- 559 (674)
T ss_dssp T-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--------SSCC-------
T ss_pred C-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH--------hCCC-------
Confidence 2 23345679999999999999999999999999999999999999997654222111111 1111
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcH-----HHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSI-----SEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm-----~eV~~~ 872 (927)
.++.....++.+|+.+|++.||++||++ .||.+|
T Consensus 560 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 560 ---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ---CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1112223468899999999999999997 777765
No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.7e-36 Score=332.35 Aligned_cols=256 Identities=19% Similarity=0.297 Sum_probs=196.0
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-CCCccceecceee--cCeEEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQE--EGRSVLVYE 675 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~~--~~~~~lV~E 675 (927)
.|.+.+.||+|+||.||+|+.. +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ....++|||
T Consensus 37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred ceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 3456789999999999999874 6889999998743 3467899999999997 9999999999987 667899999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC-cEEEEeecCcccccC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVD 754 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~-~vkL~DFGla~~~~~ 754 (927)
|+.+++|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++....
T Consensus 114 ~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 114 HVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp CCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999998873 378889999999999999999998 999999999999999776 899999999986543
Q ss_pred CCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHh--------hhcc
Q 002409 755 GASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL--------HIES 825 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~--------~~~~ 825 (927)
... .....||..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+...... .+..
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch--HHHHHHHHHhcCCchhhhHHHH
Confidence 322 233468999999999977 67899999999999999999999999543211 0111111000 0000
Q ss_pred CC------ccc--------ccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 826 GD------IQG--------IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 826 ~~------~~~--------~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. +.+ .................+.+++.+|++.||++|||+.|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 000 000000111111234578999999999999999999999986
No 208
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.1e-36 Score=326.54 Aligned_cols=249 Identities=27% Similarity=0.304 Sum_probs=198.6
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---------hhhHhHHHHHHHHhhcc-CCCccceecceeecCe
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---------QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGR 669 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---------~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~~~~~ 669 (927)
|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++++. ||||+++++++...+.
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 98 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence 445688999999999999986 688999999975431 12356789999999995 9999999999999999
Q ss_pred EEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCc
Q 002409 670 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 749 (927)
Q Consensus 670 ~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla 749 (927)
.++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++
T Consensus 99 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 99 FFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999999843 45689999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCceeeeeccCCCccCccccc------cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 750 KFAVDGASHVSSIVRGTVGYLDPEYYI------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 750 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
+...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||....... +... +
T Consensus 172 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~----~ 241 (298)
T 1phk_A 172 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML----MLRM----I 241 (298)
T ss_dssp EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH----H
T ss_pred hhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH----HHHH----H
Confidence 7654332 223345899999999985 4568889999999999999999999997543111 1111 1
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..+.... ..+ ........+.+++.+|++.+|++||++.|++++
T Consensus 242 ~~~~~~~-~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 242 MSGNYQF-GSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHTCCCC-CTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred hcCCccc-Ccc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1111100 000 011223468899999999999999999999874
No 209
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.2e-36 Score=341.06 Aligned_cols=262 Identities=19% Similarity=0.226 Sum_probs=191.7
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCch-----------hhHhHHHHHHHHhhccCCCccceecceee---
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNLVQFLGYCQE--- 666 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~-----------~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--- 666 (927)
|.+.+.||+|+||.||+|+..+++.||||++...... ..+.+.+|++++++++||||+++++++..
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 103 (362)
T 3pg1_A 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEE 103 (362)
T ss_dssp CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCT
T ss_pred eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccC
Confidence 3456899999999999999888999999998643221 12678999999999999999999999843
Q ss_pred --cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEE
Q 002409 667 --EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 744 (927)
Q Consensus 667 --~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~ 744 (927)
....++||||+. |+|.+++.. ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+
T Consensus 104 ~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 104 PAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp TTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEE
Confidence 346799999998 688887753 245689999999999999999999998 99999999999999999999999
Q ss_pred eecCcccccCCCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 745 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 745 DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+........
T Consensus 177 Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 254 (362)
T 3pg1_A 177 DFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred ecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 99999744332 22234568999999999876 6789999999999999999999999976542222222222111000
Q ss_pred ---------------ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ---------------ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ---------------~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
....... ................+.+++.+|++.+|++|||+.|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 255 IEDVVMFSSPSARDYLRNSLSN-VPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHTSCHHHHHHTTTCCCC-CCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hHHhhhccchhhhHHHHhhccc-CChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000000 00000011112223468899999999999999999999986
No 210
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.8e-36 Score=331.57 Aligned_cols=252 Identities=24% Similarity=0.398 Sum_probs=195.4
Q ss_pred HHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc--------hhhHhHHHHHHHHhhccCCCccceecceeecC
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 668 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~--------~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~ 668 (927)
...|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 345667899999999999999876 578999999864321 12345889999999999999999999987655
Q ss_pred eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc---EEEEe
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSD 745 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~---vkL~D 745 (927)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 8999999999999998843 45689999999999999999999998 9999999999999987654 99999
Q ss_pred ecCcccccCCCCceeeeeccCCCccCccccc---cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhh
Q 002409 746 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 746 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .+.....
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~-- 233 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQIT-- 233 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHHH--
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHHH--
Confidence 9999865332 2223456899999999974 4678899999999999999999999997544221 1111111
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+... ..+.... .....+.+++.+|++.||++||++.|++++
T Consensus 234 --~~~~~--~~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 --SGKYN--FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --HTCCC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --hCccc--cCchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 11110 0001111 123468899999999999999999999975
No 211
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.7e-36 Score=332.59 Aligned_cols=250 Identities=22% Similarity=0.360 Sum_probs=195.2
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
|.+.+.||+|+||.||+|+.. +++.||+|++..........+.+|++++++++||||+++++++...+..++||||+++
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 100 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 100 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence 456788999999999999987 5889999999766555667899999999999999999999999999999999999999
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
++|.+++... ...+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++....... ..
T Consensus 101 ~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 173 (302)
T 2j7t_A 101 GAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QK 173 (302)
T ss_dssp EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC
T ss_pred CcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-cc
Confidence 9999988532 35689999999999999999999998 99999999999999999999999999875322110 11
Q ss_pred eeeeccCCCccCccccc-----cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 760 SSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
.....||+.|+|||.+. ...++.++|||||||++|||++|+.||....... .+.... .+.......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~-----~~~~~~~~~- 244 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---VLLKIA-----KSDPPTLLT- 244 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHHHHH-----HSCCCCCSS-
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHHHHh-----ccCCcccCC-
Confidence 22345899999999984 5678899999999999999999999997543111 111111 111111110
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+......+.+++.+|++.+|++|||+.|++++
T Consensus 245 ------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 245 ------PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ------ccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11223468899999999999999999999874
No 212
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1e-35 Score=337.24 Aligned_cols=260 Identities=22% Similarity=0.297 Sum_probs=189.2
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecC------eEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSV 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~------~~~ 671 (927)
|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 445688999999999999876 68899999997542 233467889999999999999999999987654 789
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 107 IVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999975 7877773 3478889999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhH--------------
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ-------------- 817 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~-------------- 817 (927)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+..
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 5332 122345689999999999999999999999999999999999999976442111111110
Q ss_pred -HHHhhhccC------CcccccCCcccC---ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 818 -WAKLHIESG------DIQGIIDPSLLD---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 818 -~~~~~~~~~------~~~~~~d~~l~~---~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
......... .+...+...... .........+.+++.+|++.||++|||+.|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 000000000000 0112234578999999999999999999999987
No 213
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-35 Score=347.29 Aligned_cols=260 Identities=20% Similarity=0.321 Sum_probs=203.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccC-CCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH-RNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~H-pnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
|.+.++||+|+||.||+|++. +++.||||++..... ..++..|+++++.++| +++..+..++...+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 445789999999999999874 689999998865432 3468899999999987 55555666667788889999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE---CCCCcEEEEeecCcccccCC
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl---~~~~~vkL~DFGla~~~~~~ 755 (927)
+++|.+++... ...+++..++.|+.||+.||+|||++ +|+||||||+|||| +.++.+||+|||+++.....
T Consensus 86 g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999998532 35689999999999999999999998 99999999999999 58899999999999865543
Q ss_pred CCc------eeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 756 ASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 756 ~~~------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
... ......||+.|+|||++.+..++.++|||||||+||||++|+.||...........+......... ..+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSIE 238 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccHH
Confidence 322 122456999999999999999999999999999999999999999765422222112111111110 1110
Q ss_pred cccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 830 GIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 830 ~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
. +... ...++.+++..|++.+|++||++.+|++.|++++..
T Consensus 239 ~-----l~~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 A-----LCRG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp H-----HHTT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H-----HhcC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0011 124689999999999999999999999999998764
No 214
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.1e-36 Score=352.05 Aligned_cols=249 Identities=28% Similarity=0.408 Sum_probs=197.4
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-------------hhhHhHHHHHHHHhhccCCCccceeccee
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------------QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 665 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-------------~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~ 665 (927)
.|.+.++||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.
T Consensus 37 ~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 116 (504)
T 3q5i_A 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE 116 (504)
T ss_dssp TEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred ceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 3556789999999999999886 578999999875421 22467889999999999999999999999
Q ss_pred ecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC---cEE
Q 002409 666 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAK 742 (927)
Q Consensus 666 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~---~vk 742 (927)
+.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+|
T Consensus 117 ~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 117 DKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred cCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 99999999999999999998843 45689999999999999999999998 999999999999998776 699
Q ss_pred EEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhh
Q 002409 743 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH 822 (927)
Q Consensus 743 L~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~ 822 (927)
|+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||...... .+...+
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i--- 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ----DIIKKV--- 259 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH---
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH---
Confidence 99999998654432 223456999999999986 56899999999999999999999999765422 122211
Q ss_pred hccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 823 IESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 823 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..+.... +..... .....+.+++.+|++.+|++|||+.|++++
T Consensus 260 -~~~~~~~--~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 -EKGKYYF--DFNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp -HHCCCCC--CHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HcCCCCC--CccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111100 000001 122468899999999999999999999875
No 215
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-36 Score=337.17 Aligned_cols=256 Identities=22% Similarity=0.288 Sum_probs=200.8
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchh-----------------hHhHHHHHHHHhhccCCCccceecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG-----------------KREFTNEVTLLSRIHHRNLVQFLGY 663 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~-----------------~~~~~~Ei~iL~~l~HpnIv~l~g~ 663 (927)
|.+.+.||+|+||.||+|+. +++.||||++....... ...+.+|++++++++||||++++++
T Consensus 33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 111 (348)
T 2pml_X 33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111 (348)
T ss_dssp EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEE
T ss_pred eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 45678999999999999999 79999999987542111 1779999999999999999999999
Q ss_pred eeecCeEEEEEEeccCCchhhh------cccccccccccCHHHHHHHHHHHHhHhHHHhh-CCCCceecCCCCCCCeEEC
Q 002409 664 CQEEGRSVLVYEFMHNGTLKEH------LYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLD 736 (927)
Q Consensus 664 ~~~~~~~~lV~E~~~~gsL~~~------L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDLkp~NILl~ 736 (927)
+...+..++||||+++|+|.++ +.. .....+++..++.++.|++.||+|||+ + +|+||||||+|||++
T Consensus 112 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 112 ITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMD 186 (348)
T ss_dssp EESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEEC
T ss_pred EeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEc
Confidence 9999999999999999999998 432 125678999999999999999999999 7 999999999999999
Q ss_pred CCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccC-cCCC-ccceeeHHHHHHHHHhCCCcccccccccccch
Q 002409 737 KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTD-KSDVYSFGVILLELISGQEAISNEKFGANCRN 814 (927)
Q Consensus 737 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~-~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~ 814 (927)
.++.+||+|||+++..... ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||...... ..
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~ 260 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---VE 260 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---HH
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---HH
Confidence 9999999999999865432 23345689999999999877 6666 999999999999999999999765421 11
Q ss_pred hhHHHHhhhccCCcccc------cCCcc---cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 815 IVQWAKLHIESGDIQGI------IDPSL---LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 815 l~~~~~~~~~~~~~~~~------~d~~l---~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+.+... .+..... ..+.. ...........+.+++.+|++.+|++||++.|++++
T Consensus 261 ~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 261 LFNNIR----TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHT----SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHh----ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222111 1111000 00000 000012233468899999999999999999999985
No 216
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.8e-36 Score=346.70 Aligned_cols=197 Identities=25% Similarity=0.339 Sum_probs=169.2
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhc------cCCCccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI------HHRNLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l------~HpnIv~l~g~~~~~~~~~l 672 (927)
.|.+.+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++...+..++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 3556789999999999999876 5889999999753 23356678888888887 56799999999999999999
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc--EEEEeecCcc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSK 750 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~--vkL~DFGla~ 750 (927)
||||+. ++|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+++
T Consensus 177 v~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 999996 6898888543 234589999999999999999999998 9999999999999999987 9999999997
Q ss_pred cccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccc
Q 002409 751 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 807 (927)
Q Consensus 751 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~ 807 (927)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 54322 223468999999999999999999999999999999999999997654
No 217
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.6e-36 Score=363.37 Aligned_cols=258 Identities=21% Similarity=0.333 Sum_probs=203.6
Q ss_pred HHHHHhccccccCceEEEEEEECC----CcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 673 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~~----g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV 673 (927)
..+.+.+.||+|+||.||+|++.. +..||||+++... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEE
Confidence 445567899999999999998752 4579999987543 3334678999999999999999999999854 568999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccccc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~ 753 (927)
|||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 469 ~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 469 MELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999998532 34588999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 754 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 754 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
...........+|+.|+|||++....++.++|||||||++|||++ |..||...... .+...+. .+...
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~----~~~~~i~----~~~~~--- 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIE----NGERL--- 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHHH----HTCCC---
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHH----cCCCC---
Confidence 443333334557889999999998899999999999999999997 99999764421 2222211 11110
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
..+......+.+++.+|++.+|++||++.||++.|++++..+
T Consensus 612 ------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 612 ------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 011223346889999999999999999999999999987644
No 218
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-35 Score=335.59 Aligned_cols=263 Identities=21% Similarity=0.281 Sum_probs=198.4
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-hhhHhHHHHHHHHhhccCCCccceecceeec-----CeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~-----~~~~l 672 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 3556789999999999999876 678899999975433 3346788999999999999999999998654 46899
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
||||+. |+|.+++. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 108 v~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 108 VQDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 999997 58988874 34589999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCce--eeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcc
Q 002409 753 VDGASHV--SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQ 829 (927)
Q Consensus 753 ~~~~~~~--~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~ 829 (927)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.........+ .+.
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE-DLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH-HHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH-HHH
Confidence 4322211 234569999999998765 458999999999999999999999997655333222222111000000 000
Q ss_pred ------------cccCCcc--cCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 830 ------------GIIDPSL--LDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 830 ------------~~~d~~l--~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
....+.. ...........+.+++.+|++.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 000011223468899999999999999999999986
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=330.12 Aligned_cols=249 Identities=23% Similarity=0.381 Sum_probs=192.1
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceee------cCeEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE------EGRSVL 672 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~------~~~~~l 672 (927)
|.+.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+.+++++ +||||+++++++.. .+..++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 345789999999999999885 68899999987543 3356788999999999 89999999999976 467899
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 105 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 99999999999998643 245688999999999999999999998 9999999999999999999999999998754
Q ss_pred cCCCCceeeeeccCCCccCccccc-----cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 753 VDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 753 ~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
.... .......||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ...... ....
T Consensus 180 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~----~~~~ 250 (326)
T 2x7f_A 180 DRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALFLI----PRNP 250 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHH----HHSC
T ss_pred CcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----HHHHHh----hcCc
Confidence 3321 1223346899999999987 567889999999999999999999999654311 111111 1111
Q ss_pred cccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 828 IQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 828 ~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..... ... ....+.+++.+|++.+|++||++.|++++
T Consensus 251 ~~~~~----~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 251 APRLK----SKK----WSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CCCCS----CSC----SCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccCC----ccc----cCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111 111 12468899999999999999999999885
No 220
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2e-36 Score=338.34 Aligned_cols=252 Identities=24% Similarity=0.344 Sum_probs=195.5
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHH-HhhccCCCccceecceeecCeEEEEEEec
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYEFM 677 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~i-L~~l~HpnIv~l~g~~~~~~~~~lV~E~~ 677 (927)
+.+.+.||+|+||.||+|+.. +|+.||||+++... .....++..|..+ ++.++||||+++++++...+..++||||+
T Consensus 53 ~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (340)
T 3an0_A 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 132 (340)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCC
T ss_pred eeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHh
Confidence 344678999999999999874 68899999997543 2334455556555 78889999999999999999999999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++ +|.+++.........+++..++.++.|++.||+|||++ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 ~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 207 (340)
T 3an0_A 133 DT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS-- 207 (340)
T ss_dssp SE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH--
T ss_pred hC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecccc--
Confidence 75 99988865444566799999999999999999999974 28999999999999999999999999999765332
Q ss_pred ceeeeeccCCCccCccccc----cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 758 HVSSIVRGTVGYLDPEYYI----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~----~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...+.. ......
T Consensus 208 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~--~~~~~~----~~~~~~------ 275 (340)
T 3an0_A 208 VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQ----VVEEPS------ 275 (340)
T ss_dssp HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--HHHHHH----HHHSCC------
T ss_pred cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch--HHHHHH----HhcCCC------
Confidence 1122346999999999964 347888999999999999999999999753211 111111 111110
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+... ......++.+++.+|++.+|++||++.||+++
T Consensus 276 ~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 PQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CCCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0010 01123468899999999999999999999885
No 221
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=326.20 Aligned_cols=248 Identities=22% Similarity=0.313 Sum_probs=194.4
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC----chhhHhHHHHHHHHhhccCCCccceecce--eecCeEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYC--QEEGRSVLV 673 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~----~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~--~~~~~~~lV 673 (927)
|.+.+.||+|+||.||++... +++.||+|++.... ......+.+|++++++++||||+++++++ .+....++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 445788999999999999875 68899999987542 23456789999999999999999999998 445678999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccccc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~ 753 (927)
|||++++ |.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 87 ~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 9999876 66666432 245689999999999999999999998 99999999999999999999999999998654
Q ss_pred CCC-CceeeeeccCCCccCccccccCc--CCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccc
Q 002409 754 DGA-SHVSSIVRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 830 (927)
Q Consensus 754 ~~~-~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 830 (927)
... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .+.+. +..+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~----i~~~~~-- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY----KLFEN----IGKGSY-- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHH----HHHCCC--
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH----HHHHH----HhcCCC--
Confidence 322 22233456899999999987643 477999999999999999999999764421 11111 111111
Q ss_pred ccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 831 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 831 ~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+.. .....+.+++.+|++.||++||++.|++++
T Consensus 231 ----~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ----AIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111 123467899999999999999999999986
No 222
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7e-36 Score=336.31 Aligned_cols=266 Identities=20% Similarity=0.259 Sum_probs=187.9
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceeecCe-------EE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-------SV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~-------~~ 671 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++.... .......+|++.++.++||||+++++++...+. .+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~ 102 (360)
T 3e3p_A 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN 102 (360)
T ss_dssp TEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEE
Confidence 4455789999999999999986 68999999986543 223456778888999999999999999866443 78
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHh--hCCCCceecCCCCCCCeEECC-CCcEEEEeecC
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--TGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGL 748 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--~~~~~~ivHrDLkp~NILl~~-~~~vkL~DFGl 748 (927)
+||||+++ +|.+.+.........+++..+..++.|++.||.||| ++ +|+||||||+|||++. ++.+||+|||+
T Consensus 103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 99999986 555555443345667889999999999999999999 76 9999999999999997 89999999999
Q ss_pred cccccCCCCceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHh------
Q 002409 749 SKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL------ 821 (927)
Q Consensus 749 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~------ 821 (927)
++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.+....
T Consensus 179 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 179 AKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp CBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHH
Confidence 986544322 2334589999999998764 4899999999999999999999999765432222222221100
Q ss_pred -hhcc-CCcccccCC------cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 822 -HIES-GDIQGIIDP------SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 822 -~~~~-~~~~~~~d~------~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.... .......+. .............+.+++.+|++.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 000000000 00111122245678999999999999999999999986
No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-35 Score=336.59 Aligned_cols=258 Identities=22% Similarity=0.302 Sum_probs=180.4
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecC--CchhhHhHHHHHHHHhhccCCCccceecceeec------CeEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRSV 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~------~~~~ 671 (927)
|.+.+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++... ...+
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 455688999999999999865 6889999998653 223456788999999999999999999998654 5679
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+|+|++ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 111 lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp EEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 999999 6899888742 4689999999999999999999998 999999999999999999999999999985
Q ss_pred ccCCCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhh-------h
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLH-------I 823 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~-------~ 823 (927)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.+..... +
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 257 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 4322 233468999999999877 678999999999999999999999997654221111111111000 0
Q ss_pred ccC-------CcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESG-------DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~-------~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... .+...-...+. .........+.+|+.+|++.||++|||+.|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHH-HHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhHHHHHHHhccCCCCCCCHH-HHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 00000000000 0001123468899999999999999999999886
No 224
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.6e-35 Score=321.27 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=190.1
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceee------------
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------------ 666 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~------------ 666 (927)
.+.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 4456789999999999999975 7899999998643 3345678899999999999999999998754
Q ss_pred -cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEe
Q 002409 667 -EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 745 (927)
Q Consensus 667 -~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~D 745 (927)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred cCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 45679999999999999999642 34678889999999999999999998 999999999999999999999999
Q ss_pred ecCcccccCCC-------------CceeeeeccCCCccCccccccC-cCCCccceeeHHHHHHHHHhCCCcccccccccc
Q 002409 746 FGLSKFAVDGA-------------SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGAN 811 (927)
Q Consensus 746 FGla~~~~~~~-------------~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~ 811 (927)
||+++...... ........||+.|+|||.+.+. .++.++|||||||++|||++ ||.... .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---~ 233 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---E 233 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---H
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---h
Confidence 99997553221 1122344589999999999754 78999999999999999998 443211 0
Q ss_pred cchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 812 CRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 812 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
...+..... ... ..+...++......+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 RVNILKKLR----SVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHH----STT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHhcc----ccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 011111111 110 111122333344568899999999999999999999986
No 225
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.1e-35 Score=329.85 Aligned_cols=264 Identities=21% Similarity=0.285 Sum_probs=197.7
Q ss_pred HHHhccccccCceEEEEEEEC--CCcEEEEEEeecCCc--hhhHhHHHHHHHHhhc---cCCCccceeccee-----ecC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI---HHRNLVQFLGYCQ-----EEG 668 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~--~g~~VAVK~l~~~~~--~~~~~~~~Ei~iL~~l---~HpnIv~l~g~~~-----~~~ 668 (927)
|.+.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.+++++ +||||+++++++. ...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 456789999999999999983 678899999875432 2234677888888777 8999999999987 556
Q ss_pred eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecC
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 748 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGl 748 (927)
..++||||+. |+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred eEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcc
Confidence 7899999998 6999988543 234588999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCc
Q 002409 749 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 828 (927)
Q Consensus 749 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 828 (927)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.............
T Consensus 167 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 167 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 9754322 12234568999999999999999999999999999999999999997654222221222111100000000
Q ss_pred cc------cc---CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 829 QG------II---DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 829 ~~------~~---d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. .+ .......+.......+.+++.+|++.+|++||++.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 00 0000011112233568899999999999999999999875
No 226
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.9e-36 Score=335.98 Aligned_cols=263 Identities=22% Similarity=0.276 Sum_probs=194.7
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeec-----CeEEEE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVLV 673 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~-----~~~~lV 673 (927)
+.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ...++|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence 345688999999999999886 68899999997543 23356788999999999999999999988654 678999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccccc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~ 753 (927)
|||+. |+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 93 QELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp ECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99997 589888742 4688999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCc---------eeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 754 DGASH---------VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 754 ~~~~~---------~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
..... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...........+........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 32111 1123468999999998764 6789999999999999999999999976542111111111000000
Q ss_pred ccCCcccccCC--------------cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESGDIQGIIDP--------------SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~~~~~~~d~--------------~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
..........+ .-...........+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 00000011223468899999999999999999999885
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=338.68 Aligned_cols=263 Identities=20% Similarity=0.267 Sum_probs=180.3
Q ss_pred hccccccCceEEEEEEEC---CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceee--cCeEEEEEEecc
Q 002409 604 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVLVYEFMH 678 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~---~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~--~~~~~lV~E~~~ 678 (927)
+++||+|+||.||+|+++ +++.||||++.... ....+.+|+++|++++||||+++++++.. ....++||||+.
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 468999999999999976 57889999986442 23568899999999999999999999954 678999999997
Q ss_pred CCchhhhccccc-----ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE----CCCCcEEEEeecCc
Q 002409 679 NGTLKEHLYGTL-----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLS 749 (927)
Q Consensus 679 ~gsL~~~L~~~~-----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl----~~~~~vkL~DFGla 749 (927)
|+|.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 47877774221 1223589999999999999999999998 99999999999999 67789999999999
Q ss_pred ccccCCCC--ceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCccccccccc-----ccchhhHHHHh
Q 002409 750 KFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGA-----NCRNIVQWAKL 821 (927)
Q Consensus 750 ~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~-----~~~~l~~~~~~ 821 (927)
+....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...........
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 86543221 22234568999999999987 458999999999999999999999996543210 00011111111
Q ss_pred hhccC---Ccccc------------cCCcccCcc---------CHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 822 HIESG---DIQGI------------IDPSLLDEY---------DIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 822 ~~~~~---~~~~~------------~d~~l~~~~---------~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+... ....+ +........ .......+.+|+.+||+.||++|||+.|+++|
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11000 00000 000000000 00012367899999999999999999999987
No 228
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=9.6e-36 Score=329.27 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=195.5
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
+.+.+.||+|+||.||+|+.+. .+|+|+++... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 35 ~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~ 112 (319)
T 2y4i_B 35 LEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCK 112 (319)
T ss_dssp EECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCC
T ss_pred eEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeeccc
Confidence 4467899999999999999863 59999987542 2234567889999999999999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCC--
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-- 756 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~-- 756 (927)
+++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++ ++.+||+|||+++......
T Consensus 113 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 113 GRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp SEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999998542 34688999999999999999999998 999999999999998 6799999999987542211
Q ss_pred --CceeeeeccCCCccCcccccc---------CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhcc
Q 002409 757 --SHVSSIVRGTVGYLDPEYYIS---------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES 825 (927)
Q Consensus 757 --~~~~~~~~gt~~Y~aPE~~~~---------~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~ 825 (927)
........||+.|+|||.+.. ..++.++|||||||++|||++|+.||...... .+... ...
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~----~~~ 257 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE----AIIWQ----MGT 257 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH----HHHHH----HHT
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHH----hcc
Confidence 112233458999999999864 35788999999999999999999999754421 11111 111
Q ss_pred CCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHH
Q 002409 826 GDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVI 879 (927)
Q Consensus 826 ~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~ 879 (927)
+........ . ....+.+++.+|++.+|++|||+.||++.|+++...
T Consensus 258 ~~~~~~~~~----~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 258 GMKPNLSQI----G----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp TCCCCCCCS----S----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred CCCCCCCcC----C----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 111111111 1 123588999999999999999999999999998654
No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=326.96 Aligned_cols=262 Identities=21% Similarity=0.260 Sum_probs=190.7
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceeccee--------------
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-------------- 665 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~-------------- 665 (927)
|.+.+.||+|+||.||+|+.. +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 345688999999999999987 48899999998766666778999999999999999999998873
Q ss_pred ecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC-CCCcEEEE
Q 002409 666 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVS 744 (927)
Q Consensus 666 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~-~~~~vkL~ 744 (927)
+....++||||++ |+|.+++. ...+++..++.++.|++.||+|||++ +|+||||||+|||++ +++.+||+
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 69999884 24588999999999999999999998 999999999999997 56799999
Q ss_pred eecCcccccCCCC--ceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHH-
Q 002409 745 DFGLSKFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK- 820 (927)
Q Consensus 745 DFGla~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~- 820 (927)
|||+++....... .......+|..|+|||.+.. ..++.++|||||||++|||++|+.||......+....+.....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 243 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999986543211 11233457999999998865 6789999999999999999999999976542211111111000
Q ss_pred ------hhhccCCcccccCCccc------CccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 821 ------LHIESGDIQGIIDPSLL------DEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 821 ------~~~~~~~~~~~~d~~l~------~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.... ..+...+..... ..........+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 244 VHEEDRQELL-SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCHHHHHHHH-TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Cchhhhhhhh-hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000 000000000000 00111223568899999999999999999999875
No 230
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.1e-35 Score=328.52 Aligned_cols=250 Identities=24% Similarity=0.319 Sum_probs=192.6
Q ss_pred HHHHhccccccCceEEEEEEECCCcEEEEEEeecCC--chhhHhHHHHHHHHhhcc--CCCccceecceeecCeEEEEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~--HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.|.+.+.||+|+||.||+++..+++.||||++.... ......+.+|++++++++ |+||+++++++...+..++|||
T Consensus 29 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 108 (313)
T 3cek_A 29 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108 (313)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe
Confidence 345678999999999999999889999999997543 334567899999999997 5999999999999999999999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
+.+++|.+++.. ...+++..++.++.|++.||.|||++ +|+||||||+|||+++ +.+||+|||+++.....
T Consensus 109 -~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 109 -CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp -CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred -cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 668899999853 35688999999999999999999998 9999999999999964 89999999999865433
Q ss_pred CCc-eeeeeccCCCccCcccccc-----------CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhh
Q 002409 756 ASH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI 823 (927)
Q Consensus 756 ~~~-~~~~~~gt~~Y~aPE~~~~-----------~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~ 823 (927)
... ......||+.|+|||.+.. ..++.++|||||||++|||++|+.||..... .. .......
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~-~~~~~~~ 253 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QI-SKLHAII 253 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HH-HHHHHHH
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HH-HHHHHHH
Confidence 221 2234468999999999865 4678899999999999999999999965331 11 1111111
Q ss_pred ccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHH
Q 002409 824 ESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDI 873 (927)
Q Consensus 824 ~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L 873 (927)
. +.....++......+.+++.+|++.+|++||++.|++++-
T Consensus 254 ~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 254 D---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp C---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred h---------cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1 1111111111234688999999999999999999999863
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.7e-35 Score=332.73 Aligned_cols=258 Identities=20% Similarity=0.288 Sum_probs=193.3
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeE------E
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS------V 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~------~ 671 (927)
|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+.. +
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 445688999999999999876 68899999997542 23356788999999999999999999999877654 9
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+. ++|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 124 lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 9999997 68887762 3488999999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhcc--CCc
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIES--GDI 828 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~--~~~ 828 (927)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.........+ ..+
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 269 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 269 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTC
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHh
Confidence 4322 233468999999999987 788999999999999999999999997654222222221110000000 000
Q ss_pred c--------cccCCcccC---ccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 829 Q--------GIIDPSLLD---EYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 829 ~--------~~~d~~l~~---~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. ..+...... .........+.+++.+|++.||++|||+.|++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 270 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp SCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 000000000 0011223568899999999999999999999986
No 232
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.2e-35 Score=326.09 Aligned_cols=262 Identities=20% Similarity=0.261 Sum_probs=199.6
Q ss_pred HHHHhccccccCceEEEEEEE-C-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCC------ccceecceeecCeEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKL-K-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGRSV 671 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~-~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn------Iv~l~g~~~~~~~~~ 671 (927)
.|.+.+.||+|+||.||+|.. . +++.||||+++.. ......+.+|++++++++|++ ++++++++...+..+
T Consensus 15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 456678999999999999987 3 6789999998743 234567889999999997765 999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC--------------
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------------- 737 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~-------------- 737 (927)
+||||+ +++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 94 lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 999999 88999988543 234688999999999999999999998 9999999999999987
Q ss_pred -----CCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccccccc
Q 002409 738 -----HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 812 (927)
Q Consensus 738 -----~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~ 812 (927)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 243 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 668999999999764332 22346899999999999999999999999999999999999999764422111
Q ss_pred chhhHHHH-------hhhccCCc------c------------cccCCcc-cCccCHHHHHHHHHHHhhhcCCCCCCCCcH
Q 002409 813 RNIVQWAK-------LHIESGDI------Q------------GIIDPSL-LDEYDIQSMWKIEEKALMCVLPHGHMRPSI 866 (927)
Q Consensus 813 ~~l~~~~~-------~~~~~~~~------~------------~~~d~~l-~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm 866 (927)
..+..... ........ . ....+.. ...........+.+++.+|++.||++|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 11111000 00000000 0 0000000 001123445678999999999999999999
Q ss_pred HHHHHH
Q 002409 867 SEVLKD 872 (927)
Q Consensus 867 ~eV~~~ 872 (927)
.|++++
T Consensus 324 ~ell~h 329 (339)
T 1z57_A 324 REALKH 329 (339)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999876
No 233
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.2e-35 Score=319.65 Aligned_cols=254 Identities=26% Similarity=0.362 Sum_probs=201.5
Q ss_pred HHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 595 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 595 ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
......|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 334456677899999999999999986 68899999987542 234567899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC---CcEEEEeecC
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGL 748 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~---~~vkL~DFGl 748 (927)
+|+||+++++|.+++.. ...+++..++.++.|++.||+|||++ +++||||||+||+++.+ +.+||+|||+
T Consensus 98 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 99999999999988843 34689999999999999999999998 99999999999999764 4799999999
Q ss_pred cccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCc
Q 002409 749 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDI 828 (927)
Q Consensus 749 a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 828 (927)
++....... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... .+... +..+..
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~----~~~~~~ 239 (287)
T 2wei_A 171 STCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILKR----VETGKY 239 (287)
T ss_dssp GGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHH----HHHCCC
T ss_pred ceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH----HHHHH----HHcCCC
Confidence 976543221 223458999999998865 5899999999999999999999999764411 11111 111111
Q ss_pred ccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 829 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 829 ~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. +...... ....+.+++.+|++.+|++|||+.|++++
T Consensus 240 ~~--~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 240 AF--DLPQWRT----ISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CC--CSGGGTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CC--Cchhhhh----cCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 10 0000011 22468899999999999999999999985
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=8.3e-35 Score=327.21 Aligned_cols=257 Identities=20% Similarity=0.303 Sum_probs=192.7
Q ss_pred HHHhccccccCceEEEEEEEC-CCcEEEEEEeecCC--chhhHhHHHHHHHHhhccCCCccceecceeecCe------EE
Q 002409 601 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------SV 671 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~------~~ 671 (927)
|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+. .+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 345678999999999999876 68899999997542 2234678899999999999999999999977654 49
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+. ++|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 106 lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 9999997 58888773 3488999999999999999999998 999999999999999999999999999975
Q ss_pred ccCCCCceeeeeccCCCccCcccccc-CcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHh-------hh
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKL-------HI 823 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~-------~~ 823 (927)
.... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+...... ..
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4322 223468999999999877 67899999999999999999999999765422111111111000 00
Q ss_pred ccC-------CcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 824 ESG-------DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 824 ~~~-------~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+. .+.....+.+ ..........+.+++.+|++.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 252 NDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp SCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0000000000 01112234578899999999999999999999876
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.4e-35 Score=336.81 Aligned_cols=249 Identities=24% Similarity=0.324 Sum_probs=184.7
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEEeccCCch
Q 002409 604 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 682 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 682 (927)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 5789999999998776677999999998643 234678899999886 89999999999999999999999995 699
Q ss_pred hhhcccccccccc---cCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCC-------------CcEEEEee
Q 002409 683 KEHLYGTLTHEQR---INWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-------------MRAKVSDF 746 (927)
Q Consensus 683 ~~~L~~~~~~~~~---l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~-------------~~vkL~DF 746 (927)
.+++......... ..+..++.++.|++.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9998654222111 13334578999999999999998 99999999999999754 48999999
Q ss_pred cCcccccCCCCc---eeeeeccCCCccCcccccc-------CcCCCccceeeHHHHHHHHHh-CCCcccccccccccchh
Q 002409 747 GLSKFAVDGASH---VSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNI 815 (927)
Q Consensus 747 Gla~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l 815 (927)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||...... ...+
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~i 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR--ESNI 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--HHHH
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--HHHH
Confidence 999866543222 1234569999999999965 678999999999999999999 99999654311 0111
Q ss_pred hHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 816 VQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 816 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
. ..... .. ............++.+++.+|++.+|++|||+.||+++
T Consensus 251 ~---~~~~~---~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 251 I---RGIFS---LD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp H---HTCCC---CC-----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred h---cCCCC---cc-----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1 11111 00 01111133455678999999999999999999999875
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.9e-34 Score=328.04 Aligned_cols=199 Identities=25% Similarity=0.299 Sum_probs=166.8
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-CC-----CccceecceeecCeEEE
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HR-----NLVQFLGYCQEEGRSVL 672 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-Hp-----nIv~l~g~~~~~~~~~l 672 (927)
.|.+.+.||+|+||.||+|+.. +++.||||+++.. .....++..|+++++.++ |+ +|+++++++...+..++
T Consensus 55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 133 (382)
T 2vx3_A 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL 133 (382)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence 4556789999999999999876 6788999999743 233566788999988885 44 49999999999999999
Q ss_pred EEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC--CCCcEEEEeecCcc
Q 002409 673 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KHMRAKVSDFGLSK 750 (927)
Q Consensus 673 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~--~~~~vkL~DFGla~ 750 (927)
||||+. |+|.+++... ....+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 134 v~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 134 VFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 999996 5999988643 224589999999999999999999952 13899999999999995 47789999999998
Q ss_pred cccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccc
Q 002409 751 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 807 (927)
Q Consensus 751 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~ 807 (927)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 65432 223468999999999999999999999999999999999999998654
No 237
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.7e-35 Score=329.79 Aligned_cols=263 Identities=21% Similarity=0.344 Sum_probs=196.6
Q ss_pred HHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-----------CCCccceecceeec
Q 002409 600 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----------HRNLVQFLGYCQEE 667 (927)
Q Consensus 600 ~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-----------HpnIv~l~g~~~~~ 667 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++... ......+.+|+.++++++ |+||+++++++...
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 4566789999999999999875 6889999998743 234567889999999886 89999999998765
Q ss_pred C----eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC------C
Q 002409 668 G----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD------K 737 (927)
Q Consensus 668 ~----~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~------~ 737 (927)
+ ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++ .
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 4 789999999 88999998543 2345889999999999999999999952 899999999999994 4
Q ss_pred CCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccc---cch
Q 002409 738 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN---CRN 814 (927)
Q Consensus 738 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~---~~~ 814 (927)
.+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 458999999999865432 2234689999999999999999999999999999999999999975431111 111
Q ss_pred hhHHHHhh-----------------hcc-CCcccccCCcc---------cCccCHHHHHHHHHHHhhhcCCCCCCCCcHH
Q 002409 815 IVQWAKLH-----------------IES-GDIQGIIDPSL---------LDEYDIQSMWKIEEKALMCVLPHGHMRPSIS 867 (927)
Q Consensus 815 l~~~~~~~-----------------~~~-~~~~~~~d~~l---------~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~ 867 (927)
+.+..... ... +....+..... ...++......+.+++.+|++.||++|||+.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 11111000 000 00000000000 0123456677899999999999999999999
Q ss_pred HHHHH
Q 002409 868 EVLKD 872 (927)
Q Consensus 868 eV~~~ 872 (927)
|++++
T Consensus 330 ell~h 334 (373)
T 1q8y_A 330 GLVNH 334 (373)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99885
No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=325.38 Aligned_cols=245 Identities=24% Similarity=0.397 Sum_probs=190.2
Q ss_pred HHHHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc------hhhHhHHHHHHHHhhc----cCCCccceec
Q 002409 594 SDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY------QGKREFTNEVTLLSRI----HHRNLVQFLG 662 (927)
Q Consensus 594 ~ei~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~------~~~~~~~~Ei~iL~~l----~HpnIv~l~g 662 (927)
.+.....|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3444556777899999999999999875 688999999975432 1234566799999998 8999999999
Q ss_pred ceeecCeEEEEEEe-ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC-CCCc
Q 002409 663 YCQEEGRSVLVYEF-MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMR 740 (927)
Q Consensus 663 ~~~~~~~~~lV~E~-~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~-~~~~ 740 (927)
++...+..++|+|+ +.+++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 99999999999999 789999999853 34689999999999999999999998 999999999999999 8899
Q ss_pred EEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCC-CccceeeHHHHHHHHHhCCCcccccccccccchhhHHH
Q 002409 741 AKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA 819 (927)
Q Consensus 741 vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~ 819 (927)
+||+|||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||.... .+..
T Consensus 179 ~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~-- 247 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILE-- 247 (312)
T ss_dssp EEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHH--
T ss_pred EEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhh--
Confidence 9999999998654322 2334589999999999876664 48999999999999999999996532 1111
Q ss_pred HhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 820 KLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 820 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
... . ++......+.+++.+|++.+|++||++.|++++
T Consensus 248 ------~~~------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 ------AEL------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------TCC------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------hcc------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0 111122467899999999999999999999985
No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=8.4e-35 Score=326.05 Aligned_cols=264 Identities=19% Similarity=0.247 Sum_probs=197.9
Q ss_pred HHHHHHhccccccCceEEEEEEEC-CC-cEEEEEEeecCCchhhHhHHHHHHHHhhccCCC------ccceecceeecCe
Q 002409 598 DATKMLEKKIGSGGFGVVYYGKLK-DG-KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGR 669 (927)
Q Consensus 598 ~~~~~~~~~IG~G~fG~Vy~~~~~-~g-~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn------Iv~l~g~~~~~~~ 669 (927)
...|.+.+.||+|+||.||+|+.. ++ +.||||+++.. ......+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 345667789999999999999875 34 68999999743 334567888999999998776 8899999999999
Q ss_pred EEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEE--------------
Q 002409 670 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL-------------- 735 (927)
Q Consensus 670 ~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl-------------- 735 (927)
.++||||+ +++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 56777766432 234689999999999999999999998 99999999999999
Q ss_pred -----CCCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccccccccc
Q 002409 736 -----DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGA 810 (927)
Q Consensus 736 -----~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~ 810 (927)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 56789999999999854332 223468999999999999999999999999999999999999997644221
Q ss_pred ccchhhHHHHh-------hhccCCcc----cccCC-------------cc--cCccCHHHHHHHHHHHhhhcCCCCCCCC
Q 002409 811 NCRNIVQWAKL-------HIESGDIQ----GIIDP-------------SL--LDEYDIQSMWKIEEKALMCVLPHGHMRP 864 (927)
Q Consensus 811 ~~~~l~~~~~~-------~~~~~~~~----~~~d~-------------~l--~~~~~~~~~~~l~~L~~~Cl~~dP~~RP 864 (927)
....+...... ........ ...+. .+ ...........+.+++.+|++.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 11111110000 00000000 00000 00 0011223345789999999999999999
Q ss_pred cHHHHHHH
Q 002409 865 SISEVLKD 872 (927)
Q Consensus 865 sm~eV~~~ 872 (927)
|+.|++++
T Consensus 327 t~~e~l~h 334 (355)
T 2eu9_A 327 TLAEALLH 334 (355)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999976
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.4e-35 Score=324.33 Aligned_cols=254 Identities=26% Similarity=0.327 Sum_probs=175.8
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc-hhhHhHHHHHH-HHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVT-LLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-~~~~~~~~Ei~-iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
.+.+.||+|+||.||+|+.. +++.||||+++.... ....++..|+. +++.++||||+++++++...+..++||||++
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~ 104 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS 104 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC
Confidence 34578999999999999986 688999999976532 33445555665 7778899999999999999999999999998
Q ss_pred CCchhhhccccc-ccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 679 NGTLKEHLYGTL-THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 679 ~gsL~~~L~~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
+ +|.+++.... .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++......
T Consensus 105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 180 (327)
T 3aln_A 105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI- 180 (327)
T ss_dssp E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc-
Confidence 5 7777764211 1245688999999999999999999995 389999999999999999999999999997654322
Q ss_pred ceeeeeccCCCccCcccc----ccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccC
Q 002409 758 HVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIID 833 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~----~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 833 (927)
......||+.|+|||++ .+..++.++|||||||++|||++|+.||...... .+.... ...+..
T Consensus 181 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~-~~~~~~----- 247 (327)
T 3aln_A 181 -AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV------FDQLTQ-VVKGDP----- 247 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CC-CCCSCC-----
T ss_pred -ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH------HHHHHH-HhcCCC-----
Confidence 12233589999999998 4567899999999999999999999999753311 000000 011111
Q ss_pred CcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 834 PSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 834 ~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
+.+...........+.+++.+|++.+|++||++.||+++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111111111233468899999999999999999999875
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.7e-34 Score=322.81 Aligned_cols=247 Identities=20% Similarity=0.253 Sum_probs=168.1
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCccceecceee----cCeEEEEEEecc
Q 002409 604 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVYEFMH 678 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~----~~~~~lV~E~~~ 678 (927)
.+.||+|+||.||+|+.. +++.||||++.... ....+....++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 456999999999999887 68999999986431 222223334566799999999999876 455899999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC---CCcEEEEeecCcccccCC
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~---~~~vkL~DFGla~~~~~~ 755 (927)
+|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 110 GGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999999643 234689999999999999999999998 9999999999999986 455999999999754332
Q ss_pred CCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCc
Q 002409 756 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPS 835 (927)
Q Consensus 756 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 835 (927)
......||+.|+|||++....++.++|||||||++|||++|+.||.............. ....+...
T Consensus 185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~~~~------ 251 (336)
T 3fhr_A 185 ---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR----RIRLGQYG------ 251 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------C------
T ss_pred ---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH----hhhccccc------
Confidence 22344689999999999888999999999999999999999999975442211111111 11111000
Q ss_pred ccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 836 LLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 836 l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
............+.+++.+|++.+|++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000011223468899999999999999999999985
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.5e-35 Score=325.94 Aligned_cols=240 Identities=22% Similarity=0.369 Sum_probs=195.6
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch------hhHhHHHHHHHHhhcc--CCCccceecceeecCe
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGR 669 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~------~~~~~~~Ei~iL~~l~--HpnIv~l~g~~~~~~~ 669 (927)
..|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.++++++ |+||+++++++...+.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 34556789999999999999865 6889999999754321 2345778999999996 5999999999999999
Q ss_pred EEEEEEeccC-CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEEC-CCCcEEEEeec
Q 002409 670 SVLVYEFMHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFG 747 (927)
Q Consensus 670 ~~lV~E~~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~-~~~~vkL~DFG 747 (927)
.++|+|++.+ ++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++ +++.+||+|||
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999986 899998843 45688999999999999999999998 999999999999999 78999999999
Q ss_pred CcccccCCCCceeeeeccCCCccCccccccCcC-CCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccC
Q 002409 748 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESG 826 (927)
Q Consensus 748 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~ 826 (927)
+++..... ......||+.|+|||++....+ +.++|||||||++|||++|+.||.... .+.. +
T Consensus 196 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~--------~ 258 (320)
T 3a99_A 196 SGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIR--------G 258 (320)
T ss_dssp TCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHH--------C
T ss_pred cccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhc--------c
Confidence 99865432 2233458999999999987665 678899999999999999999996532 1110 0
Q ss_pred CcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 827 DIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 827 ~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.. ..... ...++.+++.+|++.+|++||++.||+++
T Consensus 259 ~~------~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 QV------FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CC------CCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc------ccccc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00111 22468899999999999999999999986
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.8e-34 Score=314.06 Aligned_cols=248 Identities=24% Similarity=0.311 Sum_probs=175.3
Q ss_pred HHhccccccCceEEEEEEEC-CCcEEEEEEeecCCch-h-hHhHHHHHHHHhhccCCCccceecceeecCeEEEEEEecc
Q 002409 602 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-G-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 678 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~-~-~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E~~~ 678 (927)
.+.+.||+|+||.||+|+.. +++.||||++...... . .+.+.++..+++.++||||+++++++...+..++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 45678999999999999986 6899999999765322 2 234455556788889999999999999999999999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhh-CCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCC
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 757 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 757 (927)
++.+..+... ....+++..+..++.|++.||.|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 107 ~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 107 GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 4444444321 23568899999999999999999998 4 89999999999999999999999999997554322
Q ss_pred ceeeeeccCCCccCccccc-----cCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccccc
Q 002409 758 HVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGII 832 (927)
Q Consensus 758 ~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (927)
......||+.|+|||.+. ...++.++|||||||++|||++|+.||...... ...... ... +...
T Consensus 180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~---~~~-~~~~--- 248 (318)
T 2dyl_A 180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD---FEVLTK---VLQ-EEPP--- 248 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHH---HHH-SCCC---
T ss_pred -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc---HHHHHH---Hhc-cCCC---
Confidence 223345899999999994 456888999999999999999999999753311 111111 111 1100
Q ss_pred CCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 833 DPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 833 d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.+.. .......+.+++.+|++.+|++||++.|++++
T Consensus 249 --~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 --LLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --CCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --CCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000 01122468899999999999999999999876
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=332.04 Aligned_cols=247 Identities=24% Similarity=0.330 Sum_probs=183.0
Q ss_pred HHHhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEEEEeccC
Q 002409 601 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 679 (927)
Q Consensus 601 ~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV~E~~~~ 679 (927)
+.+.+.||+|+||+||.....+++.||||++.... ...+.+|+++|+++ +||||+++++++.+.+..++||||+.
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 34467899999999766556679999999986543 23467899999999 89999999999999999999999996
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC-----CCcEEEEeecCcccccC
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----HMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~-----~~~vkL~DFGla~~~~~ 754 (927)
|+|.+++.... ..+....++.++.|++.||+|||++ +|+||||||+|||++. ...+||+|||+++....
T Consensus 102 g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 69999986432 2234445678999999999999998 9999999999999953 34688999999986543
Q ss_pred CCC--ceeeeeccCCCccCccccc---cCcCCCccceeeHHHHHHHHHh-CCCcccccccccccchhhHHHHhhhccCCc
Q 002409 755 GAS--HVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELIS-GQEAISNEKFGANCRNIVQWAKLHIESGDI 828 (927)
Q Consensus 755 ~~~--~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvvL~ellt-G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~ 828 (927)
... .......||+.|+|||++. ...++.++|||||||++|||++ |..||..... .... ........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-----~~~~---~~~~~~~~ 247 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-----RQAN---ILLGACSL 247 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-----HHHH---HHTTCCCC
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-----HHHH---HHhccCCc
Confidence 321 2233456999999999997 4567889999999999999999 9999864321 1111 11111111
Q ss_pred ccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 829 QGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 829 ~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.... ........+.+++.+|++.||++|||+.||++|
T Consensus 248 -~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 -DCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp -TTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -cccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0000 112233457899999999999999999999965
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-33 Score=343.89 Aligned_cols=240 Identities=19% Similarity=0.290 Sum_probs=192.5
Q ss_pred HHHHHhccccccCceEEEEEEEC--CCcEEEEEEeecCC-chhhHhHHHHHHHHhhccCCCccceecceeecCe-----E
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-----S 670 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~--~g~~VAVK~l~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~-----~ 670 (927)
..|.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 34667789999999999999986 58999999986543 3445678899999999999999999999987665 6
Q ss_pred EEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 671 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
++||||+++++|.+++. ..+++..++.++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 99999999999988763 2689999999999999999999998 99999999999999986 89999999998
Q ss_pred cccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCccc
Q 002409 751 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQG 830 (927)
Q Consensus 751 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 830 (927)
..... ....||+.|+|||++.+.. +.++|||||||++|||++|..|+........ .
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----------------~- 285 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----------------P- 285 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----------------C-
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc-----------------c-
Confidence 65432 3346999999999987654 8899999999999999999888764321100 0
Q ss_pred ccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCC-cHHHHHHHHHHHHH
Q 002409 831 IIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRP-SISEVLKDIQDAIV 878 (927)
Q Consensus 831 ~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RP-sm~eV~~~L~~~~~ 878 (927)
...........+.+++.+|++.+|++|| ++.++.+.|..++.
T Consensus 286 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 ------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0000111224688999999999999999 56667777777654
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.8e-34 Score=313.66 Aligned_cols=236 Identities=14% Similarity=0.130 Sum_probs=183.4
Q ss_pred HHHHHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccCCCccceecceeecCeEE
Q 002409 596 IEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 671 (927)
Q Consensus 596 i~~~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~ 671 (927)
+....|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..+
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 33345667789999999999999986 489999999976532 23467899999999999999999999999999999
Q ss_pred EEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 672 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 672 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+||||+++++|.+++... ....++..++.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 108 lv~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~---- 174 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA---- 174 (286)
T ss_dssp EEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC----
T ss_pred EEEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc----
Confidence 999999999999998432 34556888999999999999998 99999999999999999999997443
Q ss_pred ccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccc
Q 002409 752 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGI 831 (927)
Q Consensus 752 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 831 (927)
|++| ++.++|||||||++|||++|+.||......+....... ... +..
T Consensus 175 -----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~----~~~-~~~--- 222 (286)
T 3uqc_A 175 -----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER----DTA-GQP--- 222 (286)
T ss_dssp -----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB----CTT-SCB---
T ss_pred -----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH----Hhc-cCC---
Confidence 3433 67899999999999999999999986542211100000 000 000
Q ss_pred cCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 002409 832 IDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKDIQDAIVIE 880 (927)
Q Consensus 832 ~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~L~~~~~~~ 880 (927)
.............+.+++.+|++.||++| |+.|+++.|+++....
T Consensus 223 ---~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 223 ---IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp ---CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred ---CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00001112233468899999999999999 9999999999886543
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.9e-34 Score=342.43 Aligned_cols=268 Identities=22% Similarity=0.329 Sum_probs=202.3
Q ss_pred HHHHHhccccccCceEEEEEEEC-CCcEEEEEEeecC-CchhhHhHHHHHHHHhhccCCCccceecceee------cCeE
Q 002409 599 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRS 670 (927)
Q Consensus 599 ~~~~~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~------~~~~ 670 (927)
..|.+.+.||+|+||.||+|... +|+.||||+++.. .......+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 45677899999999999999875 6889999998754 33445678999999999999999999998765 6678
Q ss_pred EEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCc---EEEEeec
Q 002409 671 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFG 747 (927)
Q Consensus 671 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~---vkL~DFG 747 (927)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 99999999999999986532 234588889999999999999999998 9999999999999997664 9999999
Q ss_pred CcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCC
Q 002409 748 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGD 827 (927)
Q Consensus 748 la~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~ 827 (927)
+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ....|.......+.
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~------~~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW------QPVQWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC------HHHHSSTTCC----
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc------chhhhhhhhhcccc
Confidence 998654432 2234569999999999999999999999999999999999999997543 11222111111110
Q ss_pred cccccCC------------cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHH-----HHHHHHHHHH
Q 002409 828 IQGIIDP------------SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISE-----VLKDIQDAIV 878 (927)
Q Consensus 828 ~~~~~d~------------~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~e-----V~~~L~~~~~ 878 (927)
....... .............+.+++.+|++.||++|||+.| ..+.++.++.
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0000000 0111233446678999999999999999999988 4455665554
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.9e-34 Score=326.54 Aligned_cols=243 Identities=13% Similarity=0.079 Sum_probs=181.2
Q ss_pred HhccccccCceEEEEEEEC-CCcEEEEEEeecCCc---hhhHhHHHHHHHHhhccC-CCccceecc--------------
Q 002409 603 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHH-RNLVQFLGY-------------- 663 (927)
Q Consensus 603 ~~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~---~~~~~~~~Ei~iL~~l~H-pnIv~l~g~-------------- 663 (927)
+.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|......+
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 3578999999999999965 689999999874322 225678999999999977 333222111
Q ss_pred -------eee-----cCeEEEEEEeccCCchhhhcccc---cccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCC
Q 002409 664 -------CQE-----EGRSVLVYEFMHNGTLKEHLYGT---LTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDL 728 (927)
Q Consensus 664 -------~~~-----~~~~~lV~E~~~~gsL~~~L~~~---~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDL 728 (927)
+.. ....+++|+++ +++|.+++... ......+++..++.++.|+++||+|||++ +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 111 12356777755 67999887421 22355688899999999999999999998 9999999
Q ss_pred CCCCeEECCCCcEEEEeecCcccccCCCCceeeeeccCCCccCcccc----------ccCcCCCccceeeHHHHHHHHHh
Q 002409 729 KSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYY----------ISQQLTDKSDVYSFGVILLELIS 798 (927)
Q Consensus 729 kp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~----------~~~~~s~~sDVwSlGvvL~ellt 798 (927)
||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|||++
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999998754322 334557 999999999 55568889999999999999999
Q ss_pred CCCcccccccccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH--HHHH
Q 002409 799 GQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD--IQDA 876 (927)
Q Consensus 799 G~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~--L~~~ 876 (927)
|+.||......+....+ +... ... ...+.+++.+|++.+|++||++.|++++ ++++
T Consensus 313 g~~Pf~~~~~~~~~~~~----------------~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 313 ADLPNTDDAALGGSEWI----------------FRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp SSCCCCTTGGGSCSGGG----------------GSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred CCCCCCCcchhhhHHHH----------------Hhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 99999765422211111 1100 011 2468899999999999999999998765 4444
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=3e-33 Score=312.27 Aligned_cols=245 Identities=18% Similarity=0.180 Sum_probs=184.8
Q ss_pred HHHHHHHhccccccCceEEEEEEECCCcEEEEEEeecCCc--------hhhHhHHHHHHHHhhcc---------------
Q 002409 597 EDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIH--------------- 653 (927)
Q Consensus 597 ~~~~~~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~--------~~~~~~~~Ei~iL~~l~--------------- 653 (927)
....|.+.+.||+|+||.||+|+. +++.||||++..... ...+.+.+|++++++++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 345677889999999999999998 589999999975531 22367889999999886
Q ss_pred -----------CCCccceecceee-------------cCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHH
Q 002409 654 -----------HRNLVQFLGYCQE-------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAA 709 (927)
Q Consensus 654 -----------HpnIv~l~g~~~~-------------~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia 709 (927)
||||+++++++.. .+..++||||+++|++.+.+.. ..+++..+..++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 5666666666554 6789999999999987776632 4578999999999999
Q ss_pred hHhHHHh-hCCCCceecCCCCCCCeEECCCC--------------------cEEEEeecCcccccCCCCceeeeeccCCC
Q 002409 710 KGIEYLH-TGCVPAIIHRDLKSSNILLDKHM--------------------RAKVSDFGLSKFAVDGASHVSSIVRGTVG 768 (927)
Q Consensus 710 ~gL~yLH-~~~~~~ivHrDLkp~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~ 768 (927)
.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 88 999999999999999887 8999999999865432 3469999
Q ss_pred ccCccccccCcCCCccceeeHHHH-HHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCCcccCccCHHHHHH
Q 002409 769 YLDPEYYISQQLTDKSDVYSFGVI-LLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDPSLLDEYDIQSMWK 847 (927)
Q Consensus 769 Y~aPE~~~~~~~s~~sDVwSlGvv-L~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 847 (927)
|+|||++.+.. +.++||||++++ .+++++|..||...... ..+.+...... .. ..............+
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~---~~----~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTDKMLKQM---TF----KTKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHHHHHHTC---CC----SSCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHHhhhhhh---cc----CcccchhhhhhcCHH
Confidence 99999998665 889999998777 78899999998542100 01111111000 00 011111122345567
Q ss_pred HHHHHhhhcCCCCCCCCcHHHHH-HH
Q 002409 848 IEEKALMCVLPHGHMRPSISEVL-KD 872 (927)
Q Consensus 848 l~~L~~~Cl~~dP~~RPsm~eV~-~~ 872 (927)
+.+++.+|++.+ |+.|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999966 888888 54
No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=5e-32 Score=297.31 Aligned_cols=226 Identities=21% Similarity=0.270 Sum_probs=173.9
Q ss_pred hccccccCceEEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHH-hhccCCCccceecceee----cCeEEEEEEec
Q 002409 604 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLL-SRIHHRNLVQFLGYCQE----EGRSVLVYEFM 677 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL-~~l~HpnIv~l~g~~~~----~~~~~lV~E~~ 677 (927)
.+.||+|+||.||++... +++.||||+++. ...+.+|++++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 367999999999999875 688999999863 24567888888 55699999999999876 67789999999
Q ss_pred cCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECC---CCcEEEEeecCcccccC
Q 002409 678 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 754 (927)
Q Consensus 678 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~---~~~vkL~DFGla~~~~~ 754 (927)
++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++...
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 98 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999998643 234689999999999999999999998 9999999999999998 7899999999986432
Q ss_pred CCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccccccccccchhhHHHHhhhccCCcccccCC
Q 002409 755 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIESGDIQGIIDP 834 (927)
Q Consensus 755 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 834 (927)
+..++.++|||||||++|||++|+.||...........+.. ....+..
T Consensus 172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~----~~~~~~~------ 219 (299)
T 3m2w_A 172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQY------ 219 (299)
T ss_dssp ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC----SSCTTCC------
T ss_pred ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH----HHhhccc------
Confidence 23467899999999999999999999975431111000000 0000000
Q ss_pred cccCccCHHHHHHHHHHHhhhcCCCCCCCCcHHHHHHH
Q 002409 835 SLLDEYDIQSMWKIEEKALMCVLPHGHMRPSISEVLKD 872 (927)
Q Consensus 835 ~l~~~~~~~~~~~l~~L~~~Cl~~dP~~RPsm~eV~~~ 872 (927)
.............+.+++.+|++.+|++|||+.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 220 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000001123468899999999999999999999986
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=4e-27 Score=280.68 Aligned_cols=186 Identities=16% Similarity=0.115 Sum_probs=130.4
Q ss_pred cccccCceEEEEEE-ECCCcEEEEEEeecCCc----------hhhHhHHHHHHHHhhc-cCCCccceecceeecCeEEEE
Q 002409 606 KIGSGGFGVVYYGK-LKDGKEIAVKVLTSNSY----------QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLV 673 (927)
Q Consensus 606 ~IG~G~fG~Vy~~~-~~~g~~VAVK~l~~~~~----------~~~~~~~~Ei~iL~~l-~HpnIv~l~g~~~~~~~~~lV 673 (927)
..+.|++|....++ .--|+.+|||++..... ...++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45667777666553 23488999999975421 1235699999999999 799999999999999999999
Q ss_pred EEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCccccc
Q 002409 674 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 753 (927)
Q Consensus 674 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~ 753 (927)
|||++|++|.++|.. ...++.. +|+.||+.||+|||++ |||||||||+|||++.++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999953 3445543 5889999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcc
Q 002409 754 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI 803 (927)
Q Consensus 754 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~ 803 (927)
.... ......||++|||||++.+ .+..++|+||+|+++++|.++..++
T Consensus 391 ~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 4322 2344679999999999865 5677899999999999888776554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2.1e-24 Score=255.75 Aligned_cols=182 Identities=18% Similarity=0.227 Sum_probs=145.0
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEeecCCch--------hhHhHHHHHHHHhhccCCCccceecceeecCeEEEEEE
Q 002409 604 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~--------~~~~~~~Ei~iL~~l~HpnIv~l~g~~~~~~~~~lV~E 675 (927)
.+.||+|+||.||+|+.. ++.+++|+....... ..+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999554 788999987543211 13458899999999999999977777777788899999
Q ss_pred eccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCC
Q 002409 676 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 755 (927)
Q Consensus 676 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 755 (927)
|+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. ++||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 420 YINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp CCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred CCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999853 457899999999999998 9999999999999999 9999999999866442
Q ss_pred CCce------eeeeccCCCccCcccccc--CcCCCccceeeHHHHHHHHHhCCCcc
Q 002409 756 ASHV------SSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAI 803 (927)
Q Consensus 756 ~~~~------~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvvL~elltG~~p~ 803 (927)
.... .....||+.|||||++.. ..|+..+|+||..+-..+.+.++.++
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2211 134579999999999986 67888899999998888888776654
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.83 E-value=1.7e-21 Score=211.96 Aligned_cols=141 Identities=17% Similarity=0.108 Sum_probs=115.1
Q ss_pred hccccccCceEEEEEEECCCcEEEEEEeecCCc------------------hhhHhHHHHHHHHhhccCCCccceeccee
Q 002409 604 EKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY------------------QGKREFTNEVTLLSRIHHRNLVQFLGYCQ 665 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~------------------~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~ 665 (927)
.+.||+|+||.||+|+..+|+.||||+++.... .....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 488999999999999997799999999864321 12456889999999999 5 67777554
Q ss_pred ecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEe
Q 002409 666 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSD 745 (927)
Q Consensus 666 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~D 745 (927)
. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ ++.+||+|
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEE
Confidence 4 55699999999999988 421 12346899999999999998 999999999999999 99999999
Q ss_pred ecCcccccCCCCceeeeeccCCCccCcccccc
Q 002409 746 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS 777 (927)
Q Consensus 746 FGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 777 (927)
||+++ .+..++|||++.+
T Consensus 236 FG~a~--------------~~~~~~a~e~l~r 253 (282)
T 1zar_A 236 FPQSV--------------EVGEEGWREILER 253 (282)
T ss_dssp CTTCE--------------ETTSTTHHHHHHH
T ss_pred CCCCe--------------ECCCCCHHHHHHH
Confidence 99986 2455789998753
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=7.6e-18 Score=180.61 Aligned_cols=134 Identities=24% Similarity=0.267 Sum_probs=102.3
Q ss_pred HhccccccCceEEEEEEE-CCCcE--EEEEEeecCCch------------------------hhHhHHHHHHHHhhccCC
Q 002409 603 LEKKIGSGGFGVVYYGKL-KDGKE--IAVKVLTSNSYQ------------------------GKREFTNEVTLLSRIHHR 655 (927)
Q Consensus 603 ~~~~IG~G~fG~Vy~~~~-~~g~~--VAVK~l~~~~~~------------------------~~~~~~~Ei~iL~~l~Hp 655 (927)
+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+.+|.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999988 67888 999997543111 113578899999999988
Q ss_pred Cc--cceecceeecCeEEEEEEeccC-C----chhhhcccccccccccCHHHHHHHHHHHHhHhHHHh-hCCCCceecCC
Q 002409 656 NL--VQFLGYCQEEGRSVLVYEFMHN-G----TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH-TGCVPAIIHRD 727 (927)
Q Consensus 656 nI--v~l~g~~~~~~~~~lV~E~~~~-g----sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~ivHrD 727 (927)
++ ..++++ +..+|||||+.+ | +|.+.... .++..+..++.|++.+|.||| +. +|+|||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 65 233322 356899999942 4 45444321 123456789999999999999 87 999999
Q ss_pred CCCCCeEECCCCcEEEEeecCcccc
Q 002409 728 LKSSNILLDKHMRAKVSDFGLSKFA 752 (927)
Q Consensus 728 Lkp~NILl~~~~~vkL~DFGla~~~ 752 (927)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.63 E-value=3e-16 Score=173.01 Aligned_cols=144 Identities=28% Similarity=0.496 Sum_probs=125.6
Q ss_pred CchHHHHHHHHhcC----CCCcCCCCCCCCCCCCcceeecCCCC-CCceEEEEecCCCCCc--cCCchhhcCCCCcEEec
Q 002409 373 GSIDAIVSVISLYS----SADWAQEGGDPCLPVPWSWLQCNSDP-QPSITVIHLSSKNLTG--NIPSDLTKLSSLVELWL 445 (927)
Q Consensus 373 ~~~dal~~~~~~~~----~~~w~~~~~dpC~~~~~~~v~C~~~~-~~~l~~L~L~~n~l~g--~ip~~i~~L~~L~~L~L 445 (927)
.+++|+.++|+.+. ..+|.. +.|||. ..|.||.|+... ..+|+.|+|++|+++| .+|..|+++++|++|+|
T Consensus 6 ~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~-~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L 83 (313)
T 1ogq_A 6 QDKQALLQIKKDLGNPTTLSSWLP-TTDCCN-RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYI 83 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGTTCCT-TSCTTT-TCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEE
T ss_pred HHHHHHHHHHHhcCCcccccCCCC-CCCCCc-CCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeC
Confidence 46789999999874 367965 578883 249999997532 3689999999999999 99999999999999999
Q ss_pred cC-CcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccccccccccccccccc--cccccccccCCc
Q 002409 446 DG-NSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNI 518 (927)
Q Consensus 446 s~-N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~--~~~~~l~~~~n~ 518 (927)
++ |.+.+.+|. +.++++|++|+|++|+++|.+|..+.++++|++|+|++|+|+|.+|..+. +.+..+.+.+|.
T Consensus 84 ~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 84 GGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred CCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 95 999999886 89999999999999999999999999999999999999999999998874 456777888874
No 256
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.57 E-value=1.5e-15 Score=170.05 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=95.0
Q ss_pred HHhccccccCceEEEEEEECCCcEEEEEEeecCCc-----h---------hhHhH--------HHHHHHHhhccCCCccc
Q 002409 602 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY-----Q---------GKREF--------TNEVTLLSRIHHRNLVQ 659 (927)
Q Consensus 602 ~~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~-----~---------~~~~~--------~~Ei~iL~~l~HpnIv~ 659 (927)
.+.++||+|+||.||+|...+|+.||||+++.... . ..... .+|...|.++.+.++..
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34678999999999999999999999999764210 0 01111 23455555554433321
Q ss_pred eecceeecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCC
Q 002409 660 FLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 739 (927)
Q Consensus 660 l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~ 739 (927)
..-+.. ...+|||||+++++|.++... .....++.|++.+|.+||+. +||||||||.|||+++++
T Consensus 178 p~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred Ceeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 111111 223799999999888765421 12346789999999999998 999999999999998876
Q ss_pred ----------cEEEEeecCccc
Q 002409 740 ----------RAKVSDFGLSKF 751 (927)
Q Consensus 740 ----------~vkL~DFGla~~ 751 (927)
.+.|+||+.+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999997754
No 257
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=3e-15 Score=185.69 Aligned_cols=141 Identities=18% Similarity=0.241 Sum_probs=122.4
Q ss_pred CchHHHHHHHHhcCCCCcCCCC----CCC--CCCCCc------------ceeecCCCCCCceEEEEecCCCCCccCCchh
Q 002409 373 GSIDAIVSVISLYSSADWAQEG----GDP--CLPVPW------------SWLQCNSDPQPSITVIHLSSKNLTGNIPSDL 434 (927)
Q Consensus 373 ~~~dal~~~~~~~~~~~w~~~~----~dp--C~~~~~------------~~v~C~~~~~~~l~~L~L~~n~l~g~ip~~i 434 (927)
.+++||.++++++...+|...+ .+| | .| .||.|+. ..+|+.|+|++|+|.|.+|+.|
T Consensus 269 ~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C---~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~G~ip~~l 343 (876)
T 4ecn_A 269 KDYKALKAIWEALDGKNWRYYSGTINNTIHSL---NWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAKGRVPDAI 343 (876)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCC---SCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCEEEECGGG
T ss_pred HHHHHHHHHHHHcCCCCCCcCCCcccccCCcc---ccccccccccccCcCceEecC--CCCEEEEECccCCCCCcCchHH
Confidence 4678999999999877997644 366 6 79 9999986 3699999999999999999999
Q ss_pred hcCCCCcEEec-cCCcCCCC------------------------------------------------------------
Q 002409 435 TKLSSLVELWL-DGNSLTGP------------------------------------------------------------ 453 (927)
Q Consensus 435 ~~L~~L~~L~L-s~N~l~g~------------------------------------------------------------ 453 (927)
++|++|+.|+| ++|.++|.
T Consensus 344 ~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l 423 (876)
T 4ecn_A 344 GQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRI 423 (876)
T ss_dssp GGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCC
T ss_pred hccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccccc
Confidence 99999999999 88866554
Q ss_pred ----------------CCC-CCCCCCccEEEecCCCcCC-----------------CCCcccc--CCCcccccccccccc
Q 002409 454 ----------------IPD-FSGCPDLRIIHLEDNQLTG-----------------PLPSSLM--NLPNLRELYVQNNML 497 (927)
Q Consensus 454 ----------------~p~-~~~l~~L~~L~Ls~N~l~g-----------------~~P~~l~--~l~~L~~L~l~~N~l 497 (927)
||. +.+|++|++|+|++|+|+| .+|+.++ +|++|+.|+|++|++
T Consensus 424 ~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l 503 (876)
T 4ecn_A 424 SLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPN 503 (876)
T ss_dssp CCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTT
T ss_pred chhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCC
Confidence 664 7889999999999999998 4999988 999999999999999
Q ss_pred ccccccccc--cccccccccCCc
Q 002409 498 SGTVPSSLL--SKNVVLNYAGNI 518 (927)
Q Consensus 498 ~g~iP~~l~--~~~~~l~~~~n~ 518 (927)
.|.+|..+. +.+..+++.+|.
T Consensus 504 ~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 504 MTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CCSCCGGGGGCSSCCEEECTTCT
T ss_pred CccChHHHhCCCCCCEEECcCCC
Confidence 999998874 456778888885
No 258
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.52 E-value=5.7e-15 Score=178.78 Aligned_cols=139 Identities=19% Similarity=0.259 Sum_probs=119.4
Q ss_pred CchHHHHHHHHhcCCC-------------CcCCCCCCCCCCCCc---ceeecCCCCCCceEEEEecCCCCCccCCchhhc
Q 002409 373 GSIDAIVSVISLYSSA-------------DWAQEGGDPCLPVPW---SWLQCNSDPQPSITVIHLSSKNLTGNIPSDLTK 436 (927)
Q Consensus 373 ~~~dal~~~~~~~~~~-------------~w~~~~~dpC~~~~~---~~v~C~~~~~~~l~~L~L~~n~l~g~ip~~i~~ 436 (927)
.+++||.+++.++... +|.. +.||| .| .||.|+.. .+|+.|+|++|+|+|.+|+.|++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c---~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELD---MWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGG---GTTCCTTEEECTT--CCEEEEECTTSCCEEEECGGGGG
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcc---cccCCCCeEEcCC--CCEEEEEecCcccCCcCChHHhc
Confidence 4678999999886543 4654 46788 68 99999764 69999999999999999999999
Q ss_pred CCCCcEEeccCCc-------------------------------------------------------------------
Q 002409 437 LSSLVELWLDGNS------------------------------------------------------------------- 449 (927)
Q Consensus 437 L~~L~~L~Ls~N~------------------------------------------------------------------- 449 (927)
|++|+.|+|++|.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 9999999999984
Q ss_pred -----------CCCCCCC-CCCCCCccEEEecCCCcCCC-----------------CCcccc--CCCccccccccccccc
Q 002409 450 -----------LTGPIPD-FSGCPDLRIIHLEDNQLTGP-----------------LPSSLM--NLPNLRELYVQNNMLS 498 (927)
Q Consensus 450 -----------l~g~~p~-~~~l~~L~~L~Ls~N~l~g~-----------------~P~~l~--~l~~L~~L~l~~N~l~ 498 (927)
|+| ||. ++++++|++|+|++|+|+|. +|+.++ ++++|++|+|++|+++
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 445 564 88899999999999999986 999999 9999999999999999
Q ss_pred cccccccc--cccccccccCCc
Q 002409 499 GTVPSSLL--SKNVVLNYAGNI 518 (927)
Q Consensus 499 g~iP~~l~--~~~~~l~~~~n~ 518 (927)
|.+|..+. +.+..+++.+|.
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCT
T ss_pred ccChHHHhcCCCCCEEECcCCC
Confidence 99998874 456778888885
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.50 E-value=1.3e-14 Score=179.56 Aligned_cols=113 Identities=28% Similarity=0.433 Sum_probs=105.0
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..+.|+.|||++|+++|.+|..|++|++|+.|+|++|+|+|.+|. ++++++|+.|||++|+++|.+|..+++|++|+.|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 356899999999999999999999999999999999999999997 8999999999999999999999999999999999
Q ss_pred ccccccccccccccc-ccccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l-~~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+|.||..- +.......+.||+++|+.+
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred ECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 999999999999763 5555677899999999875
No 260
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.39 E-value=6.6e-13 Score=135.37 Aligned_cols=123 Identities=24% Similarity=0.301 Sum_probs=105.7
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCc-hhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDN 471 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~-~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N 471 (927)
.|..+.|+... ..+++.|+|++|+|++..+. .+.++++|++|+|++|+|++.+|. |.++++|++|+|++|
T Consensus 9 ~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 9 EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 46778887532 24899999999999976664 489999999999999999999886 899999999999999
Q ss_pred CcCCCCCccccCCCccccccccccccccccccccc--cccccccccCCcccccCC
Q 002409 472 QLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 472 ~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~--~~~~~l~~~~n~~l~~~~ 524 (927)
+|++..|..+.++++|+.|+|++|+|++.+|..+. +.+..+.+.+|+-.|...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888899999999999999999988787763 456788899998777653
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.37 E-value=1.2e-12 Score=137.40 Aligned_cols=121 Identities=24% Similarity=0.335 Sum_probs=102.0
Q ss_pred CCCCCCCCCcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCcc
Q 002409 394 GGDPCLPVPWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR 464 (927)
Q Consensus 394 ~~dpC~~~~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~ 464 (927)
+.+.| +|.+|.|+... .++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++..+. +.++++|+
T Consensus 15 ~~~~C---s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 15 SQCSC---SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp TTCEE---ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCEE---eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 57888 69999997632 36799999999999988899999999999999999999877766 68899999
Q ss_pred EEEecCCCcCCCCCccccCCCccccccccccccccccccccc--cccccccccCCc
Q 002409 465 IIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNI 518 (927)
Q Consensus 465 ~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~--~~~~~l~~~~n~ 518 (927)
+|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+. ..+..+.+.+|.
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSC
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCc
Confidence 9999999999776777889999999999999999 8887763 345666777774
No 262
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.37 E-value=2.4e-13 Score=168.17 Aligned_cols=124 Identities=30% Similarity=0.500 Sum_probs=80.5
Q ss_pred CchHHHHHHHHhcC----CCCcCCCCCCCCCCCCcceeecCCCCCCceEEEEecCCCCCcc---CCchhhc---------
Q 002409 373 GSIDAIVSVISLYS----SADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNLTGN---IPSDLTK--------- 436 (927)
Q Consensus 373 ~~~dal~~~~~~~~----~~~w~~~~~dpC~~~~~~~v~C~~~~~~~l~~L~L~~n~l~g~---ip~~i~~--------- 436 (927)
.+++|+.++|+.+. +.+|.. +.||| .|.||+|+ ..+|+.|+|+++++.|. +|+.+++
T Consensus 12 ~~~~all~~k~~~~~~~~l~~W~~-~~~~C---~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 12 REIHQLISFKDVLPDKNLLPDWSS-NKNPC---TFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp HHHHHHHHHHTTCSCTTSSTTCCT-TSCGG---GSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred HHHHHHHHHHhhCCCcccccCCCC-CCCCc---CCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 46779999999874 678974 67899 79999998 36999999999999998 6655544
Q ss_pred --------------CCCCcEEeccCCcCCCCCCC---CCCCCCccEEEecCCCcCCCCCccc-cCCCccccccccccccc
Q 002409 437 --------------LSSLVELWLDGNSLTGPIPD---FSGCPDLRIIHLEDNQLTGPLPSSL-MNLPNLRELYVQNNMLS 498 (927)
Q Consensus 437 --------------L~~L~~L~Ls~N~l~g~~p~---~~~l~~L~~L~Ls~N~l~g~~P~~l-~~l~~L~~L~l~~N~l~ 498 (927)
|++|++|+|++|.++|.+|. ++++++|++|+|++|++++.+|..+ .++++|+.|+|++|+++
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred cCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 45555555555555554442 4445555555555555555555443 45555555555555555
Q ss_pred ccccc
Q 002409 499 GTVPS 503 (927)
Q Consensus 499 g~iP~ 503 (927)
|..|.
T Consensus 165 ~~~~~ 169 (768)
T 3rgz_A 165 GANVV 169 (768)
T ss_dssp EETHH
T ss_pred CcCCh
Confidence 44443
No 263
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.35 E-value=2.6e-12 Score=128.76 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=96.9
Q ss_pred eEecCCCCCccccCCCeEEccCCccc-cCcceeeec----C---cccccccceeeeecCCCCcceeeecccCCceEEEeE
Q 002409 33 VSLNCGGNENFTDEIGLQWIADDHLI-YGEISNISV----A---NETRKQYMTLRHFPADSRKYCYKLDVITRTRYLIRA 104 (927)
Q Consensus 33 ~~idcG~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~----~---~~~~~~~~tlR~Fp~~~~~~cy~l~~~~~~~ylvr~ 104 (927)
+.||||++.. +|..+++|.+|..|. .|..+.... . ....+.|+|.|.||. +.+|.+|+.++|+|+||+
T Consensus 8 ~~INcGg~~~-~d~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~---~~tY~f~v~~~G~Y~VrL 83 (174)
T 2jwp_A 8 WAVNAGGESH-VDVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED---SFGYDIPIKEEGEYVLVL 83 (174)
T ss_dssp EEEEETSSSE-EETTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS---CEEEEEECCSCEEEEEEE
T ss_pred EEEECCCCCc-cCCCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC---CeEEEEEeCCCeEEEEEE
Confidence 4799998875 567899999998886 343221110 1 112347899999995 579999999999999999
Q ss_pred EeeecCcCCCCCCCeeEEEECCcee-eEEeeC---CCCccEEEEEEEEe-------------cCCCceEEEecCCCCCce
Q 002409 105 TFLYGNFDNNNVYPKFDISLGPTHW-STIVIS---DAATIEVRELIFLA-------------SSPKIDVCLSNATTGQPF 167 (927)
Q Consensus 105 ~f~yg~~d~~~~~p~fd~~~~~~~w-~~v~~~---~~~~~~~~e~~~~~-------------~~~~~~vcl~~~~~~~pf 167 (927)
+|.--.|.. ....+||++|++..- .-.+.. ....+.+.|..+.+ .+..+.|.|.+...+.||
T Consensus 84 hF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~a~ 162 (174)
T 2jwp_A 84 KFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPK 162 (174)
T ss_dssp EEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCSSS
T ss_pred EEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCCcE
Confidence 998766654 456799999998532 112211 12335566666543 455688888865466899
Q ss_pred eeeeeeeec
Q 002409 168 ISTLELRQF 176 (927)
Q Consensus 168 is~le~~~l 176 (927)
||+||+++-
T Consensus 163 inaIEI~~~ 171 (174)
T 2jwp_A 163 VCALFIMKG 171 (174)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEEeC
Confidence 999999864
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.35 E-value=2.1e-13 Score=151.22 Aligned_cols=139 Identities=23% Similarity=0.315 Sum_probs=116.4
Q ss_pred CchHHHHHHHHhcC--C----CCcC---CCCCCCCCCCCcceeecCC-------CCCCceEEEEecCCCCCccCCchhhc
Q 002409 373 GSIDAIVSVISLYS--S----ADWA---QEGGDPCLPVPWSWLQCNS-------DPQPSITVIHLSSKNLTGNIPSDLTK 436 (927)
Q Consensus 373 ~~~dal~~~~~~~~--~----~~w~---~~~~dpC~~~~~~~v~C~~-------~~~~~l~~L~L~~n~l~g~ip~~i~~ 436 (927)
.+++|+.++++.+. . .+|. ...+++| .|.|+.|+. ...++|+.|+|++|+++ .+|+.+++
T Consensus 27 ~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~---~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 27 PYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE---TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC---CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred hHHHHHHHHHHhccCCchhhhhhhccccccccccc---ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 45678999988652 2 4563 2256777 699999952 34578999999999999 89999999
Q ss_pred CCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccccccccccccccccc----------
Q 002409 437 LSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---------- 505 (927)
Q Consensus 437 L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l---------- 505 (927)
|++|++|+|++|.|+ .+|. +.++++|++|+|++|+++ .+|..++++++|+.|+|++|++.|.+|..+
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 999999999999999 6665 889999999999999999 899999999999999999999999999987
Q ss_pred -ccccccccccCC
Q 002409 506 -LSKNVVLNYAGN 517 (927)
Q Consensus 506 -~~~~~~l~~~~n 517 (927)
+..+..+.+.+|
T Consensus 181 ~l~~L~~L~L~~n 193 (328)
T 4fcg_A 181 GLVNLQSLRLEWT 193 (328)
T ss_dssp ESTTCCEEEEEEE
T ss_pred cCCCCCEEECcCC
Confidence 445566666666
No 265
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.34 E-value=2.6e-12 Score=131.19 Aligned_cols=120 Identities=23% Similarity=0.285 Sum_probs=104.5
Q ss_pred cceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCc
Q 002409 403 WSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQL 473 (927)
Q Consensus 403 ~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l 473 (927)
+..+.|+... .+.|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+. |.++++|++|+|++|+|
T Consensus 12 ~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 12 DTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 5567786532 357999999999999 8999999999999999999999998886 89999999999999999
Q ss_pred CCCCCccccCCCccccccccccccccccccccc---cccccccccCCcccccCC
Q 002409 474 TGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 474 ~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~~ 524 (927)
++..|..|..+++|+.|+|++|+|+ .+|...+ ..+..+.+.+|+-.|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9888889999999999999999999 6776543 456778889999888664
No 266
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.33 E-value=3.9e-12 Score=127.55 Aligned_cols=121 Identities=24% Similarity=0.271 Sum_probs=103.4
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.|.++.|+... .++|+.|+|++|++++..+..+.++++|++|+|++|+|++.++. +.++++|++|+|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 68889997533 36899999999999976666789999999999999999988876 6899999999999999
Q ss_pred cCCCCCccccCCCccccccccccccccccccccc---cccccccccCCcccccC
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEG 523 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~ 523 (927)
|++..+..+.++++|+.|+|++|+|+ .+|...+ +.+..+.+.+|+-.|..
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99877777899999999999999999 6776653 45577888999876654
No 267
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.31 E-value=2.5e-12 Score=134.04 Aligned_cols=113 Identities=21% Similarity=0.254 Sum_probs=96.6
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.|++..+..|.++++|+.|+|++|+|++.+|. +.++++|++|+|++|+|++..|..+.++++|+.|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 356899999999999987777899999999999999999988886 8889999999999999998889999999999999
Q ss_pred cccccccccccccccc--cccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLL--SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~--~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|++..|..+. ..+..+.+.+|+-.|...
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999966676663 455778888998777654
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.29 E-value=5.9e-12 Score=131.27 Aligned_cols=113 Identities=24% Similarity=0.297 Sum_probs=94.5
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.|++..|..|.+|++|++|+|++|+|++..+. |.++++|++|+|++|+|++..|..+.++++|+.|
T Consensus 54 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 133 (220)
T 2v9t_B 54 PYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLL 133 (220)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEE
Confidence 356899999999999988889999999999999999999977776 6889999999999999998888899999999999
Q ss_pred ccccccccccccccc--ccccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|++..|..+ +..+..+.+.+|+-.|.+.
T Consensus 134 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 134 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 999999994444333 2345678889998877653
No 269
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.28 E-value=1.4e-12 Score=143.56 Aligned_cols=109 Identities=27% Similarity=0.317 Sum_probs=101.4
Q ss_pred eEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccccccc
Q 002409 416 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 495 (927)
Q Consensus 416 l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N 495 (927)
|+.|+|++|.+++.+|..+.++++|+.|+|++|++++.+|.+..+++|++|+|++|+|+|.+|..+.++++|+.|+|++|
T Consensus 199 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccc-ccccccccccCCcccccCC
Q 002409 496 MLSGTVPSSL-LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 496 ~l~g~iP~~l-~~~~~~l~~~~n~~l~~~~ 524 (927)
+|+|.+|..- ++.+..+.+.+|+.+|+.+
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cccccCCCCccccccChHHhcCCCCccCCC
Confidence 9999999862 3456778899999999864
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.27 E-value=4.4e-12 Score=129.21 Aligned_cols=113 Identities=22% Similarity=0.281 Sum_probs=97.2
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. +.++++|++|+|++|+|++.+|..+..+++|+.|
T Consensus 52 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (192)
T 1w8a_A 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp GCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred cCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEE
Confidence 357899999999999999999999999999999999999999887 8899999999999999999999999999999999
Q ss_pred ccccccccccccccccc-ccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLLS-KNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~~-~~~~l~~~~n~~l~~~~ 524 (927)
+|++|++++..+...+. .+....+.++...|..+
T Consensus 132 ~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 132 NLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp ECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred EeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999999887754432 22333445565666655
No 271
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.25 E-value=1.2e-11 Score=123.37 Aligned_cols=84 Identities=29% Similarity=0.351 Sum_probs=39.2
Q ss_pred ceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 415 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
+|+.|+|++|+|++..|..|.+|++|++|+|++|+|++.+|. |.++++|++|+|++|+|++..|..+.++++|+.|+|+
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 110 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLL 110 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeC
Confidence 344444444444444444444444444444444444444443 3444444444444444443333334444444444444
Q ss_pred ccccc
Q 002409 494 NNMLS 498 (927)
Q Consensus 494 ~N~l~ 498 (927)
+|+++
T Consensus 111 ~N~~~ 115 (170)
T 3g39_A 111 NNPWD 115 (170)
T ss_dssp SSCBC
T ss_pred CCCCC
Confidence 44444
No 272
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.25 E-value=2.8e-12 Score=150.11 Aligned_cols=108 Identities=15% Similarity=0.128 Sum_probs=90.5
Q ss_pred CCceEEEEecCCCCCccCCchhh-cCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~-~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.|++.+|..+. +|++|+.|+|++|.|++. |.+..+++|+.|+|++|+|++ +|+.+..+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 46899999999999988888886 799999999999999887 555579999999999999996 555688999999999
Q ss_pred ccccccccccccccc--cccccccccCCcccccC
Q 002409 492 VQNNMLSGTVPSSLL--SKNVVLNYAGNINLHEG 523 (927)
Q Consensus 492 l~~N~l~g~iP~~l~--~~~~~l~~~~n~~l~~~ 523 (927)
|++|+|+ .+|..+. +.+..+++.+|+..|+.
T Consensus 221 Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred ecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcc
Confidence 9999999 5887763 45677888999877654
No 273
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.21 E-value=2.1e-11 Score=127.03 Aligned_cols=118 Identities=20% Similarity=0.237 Sum_probs=99.0
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.|..+.|+... .++|+.|+|++|+|++..+..+..+++|+.|+|++|+|++..|. |.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 12 SNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp ETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred CCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 46778887533 24799999999999977777899999999999999999998886 8999999999999999
Q ss_pred cCCCCCccccCCCccccccccccccccccccccc--cccccccccCCcc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNIN 519 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~--~~~~~l~~~~n~~ 519 (927)
|++..+..+..+++|+.|+|++|+|++..|..+. ..+..+++.+|..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 140 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcC
Confidence 9965555678999999999999999966666553 4567778888853
No 274
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.21 E-value=3e-11 Score=126.66 Aligned_cols=111 Identities=24% Similarity=0.219 Sum_probs=96.1
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|+|++..+..+.+|++|+.|+|++|+|++..+. +..+++|++|+|++|+|+ .+|..+.++++|+.|
T Consensus 62 ~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 140 (229)
T 3e6j_A 62 SLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL 140 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE
T ss_pred CccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE
Confidence 357899999999999855556679999999999999999998887 688999999999999999 899999999999999
Q ss_pred cccccccccccccccc---cccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+ .+|...+ +.+..+.+.+|+-.|.+.
T Consensus 141 ~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 141 ALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ECCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999999 5665543 456778889998877663
No 275
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.21 E-value=3.5e-11 Score=123.84 Aligned_cols=116 Identities=25% Similarity=0.344 Sum_probs=93.9
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.|.++.|+... .++|+.|+|++|++++..+..+.++++|++|+|++|+|++..+. +.++++|++|+|++|+
T Consensus 8 ~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 8 SGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 68889997532 35789999999999966666788999999999999999987776 6889999999999999
Q ss_pred cCCCCCccccCCCcccccccccccccccccccc---ccccccccccCCc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNI 518 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l---~~~~~~l~~~~n~ 518 (927)
+++..+..+.++++|+.|+|++|+|+ .+|... +..+..+++.+|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~ 135 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQ 135 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCc
Confidence 99766667889999999999999999 455543 3455667777774
No 276
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.21 E-value=2.2e-11 Score=121.54 Aligned_cols=105 Identities=24% Similarity=0.299 Sum_probs=90.7
Q ss_pred eEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccccc
Q 002409 416 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 494 (927)
Q Consensus 416 l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~ 494 (927)
.+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..|. |.++++|++|+|++|+|++..|..+.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468999999999 6888774 8999999999999999886 89999999999999999977777789999999999999
Q ss_pred ccccccccccc---ccccccccccCCcccccCC
Q 002409 495 NMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 495 N~l~g~iP~~l---~~~~~~l~~~~n~~l~~~~ 524 (927)
|+|+ .+|... +..+..+.+.+|+-.|...
T Consensus 88 N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLK-SIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccC-EeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999 566553 3456788899998877763
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.19 E-value=3.5e-11 Score=125.33 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=99.6
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCc-hhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDN 471 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~-~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N 471 (927)
.|..+.|+... ...++.|+|++|+|++..|. .+.++++|+.|+|++|+|++..+. |.++++|++|+|++|
T Consensus 12 ~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 12 EGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 46678887543 24678999999999977654 589999999999999999998884 899999999999999
Q ss_pred CcCCCCCccccCCCccccccccccccccccccccc--cccccccccCCcc
Q 002409 472 QLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNIN 519 (927)
Q Consensus 472 ~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~--~~~~~l~~~~n~~ 519 (927)
+|++..|..+.++++|+.|+|++|+|++..|..+. ..+..+++.+|..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 141 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI 141 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcC
Confidence 99988888899999999999999999976676663 4567778888843
No 278
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.18 E-value=5.3e-11 Score=126.41 Aligned_cols=111 Identities=23% Similarity=0.279 Sum_probs=94.2
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|+|++..+..+..+++|++|+|++|+|++..+. +.++++|++|+|++|+|++..|..+.++++|+.|
T Consensus 81 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 160 (251)
T 3m19_A 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTL 160 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEE
Confidence 357899999999999977777889999999999999999988877 6889999999999999997777789999999999
Q ss_pred ccccccccccccccc--ccccccccccCCccccc
Q 002409 491 YVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHE 522 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~l~~ 522 (927)
+|++|+|++..|..+ ++.+..+.+.+|+-.|.
T Consensus 161 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 161 SLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999995444344 34567788899987776
No 279
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.17 E-value=1.8e-11 Score=119.03 Aligned_cols=105 Identities=19% Similarity=0.213 Sum_probs=89.0
Q ss_pred CCceEEEEecCCCCC-ccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~-g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. +.+.++++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 357999999999998 88999899999999999999999988 7789999999999999999988888888899999999
Q ss_pred ccccccccc-ccccc--ccccccccccCCc
Q 002409 492 VQNNMLSGT-VPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~-iP~~l--~~~~~~l~~~~n~ 518 (927)
|++|++++. .|..+ ++.+..+.+.+|.
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCc
Confidence 999999952 23444 3445677777774
No 280
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.17 E-value=8.1e-11 Score=121.10 Aligned_cols=112 Identities=24% Similarity=0.227 Sum_probs=93.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|++++..+..+.++++|++|+|++|+|++.++. +.++++|++|+|++|+|++..+..+.++++|+.|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 356899999999999966556678999999999999999988776 6889999999999999997777778999999999
Q ss_pred ccccccccccccccc---ccccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSL---LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l---~~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+ .+|... +..+..+.+.+|+..|..+
T Consensus 130 ~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 130 RLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp ECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred ECCCCccc-eeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99999999 555554 3456778888997766543
No 281
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.17 E-value=5.1e-11 Score=119.42 Aligned_cols=103 Identities=22% Similarity=0.348 Sum_probs=79.7
Q ss_pred EEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccccccc
Q 002409 417 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 495 (927)
Q Consensus 417 ~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N 495 (927)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+|. |.++++|++|+|++|+|++..+..+.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57888888886 7887664 7888888888888888775 778888888888888888655555688888888888888
Q ss_pred cccccccccc---ccccccccccCCcccccC
Q 002409 496 MLSGTVPSSL---LSKNVVLNYAGNINLHEG 523 (927)
Q Consensus 496 ~l~g~iP~~l---~~~~~~l~~~~n~~l~~~ 523 (927)
+|+ .+|... ++.+..+.+.+|+-.|..
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 888 566553 344567778888776655
No 282
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.16 E-value=5.3e-11 Score=119.29 Aligned_cols=91 Identities=23% Similarity=0.328 Sum_probs=81.9
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|++|+|++|+|++..+..+..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 5789999999999988899999999999999999999998877 689999999999999999766666999999999999
Q ss_pred ccccccccccccc
Q 002409 493 QNNMLSGTVPSSL 505 (927)
Q Consensus 493 ~~N~l~g~iP~~l 505 (927)
++|++. ..|..+
T Consensus 113 ~~N~~~-c~~~~~ 124 (174)
T 2r9u_A 113 YNNPWD-CECRDI 124 (174)
T ss_dssp CSSCBC-TTBGGG
T ss_pred CCCCcc-cccccH
Confidence 999999 455433
No 283
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.16 E-value=3.1e-11 Score=119.80 Aligned_cols=104 Identities=22% Similarity=0.266 Sum_probs=89.6
Q ss_pred CCceEEEEecCCCCC-ccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~-g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.|++. +.+..+++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 468999999999998 88999999999999999999999987 7789999999999999999988888888899999999
Q ss_pred ccccccccccc--ccc--ccccccccccCCc
Q 002409 492 VQNNMLSGTVP--SSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP--~~l--~~~~~~l~~~~n~ 518 (927)
|++|+|++ +| ..+ ++.+..+.+.+|.
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~ 131 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCE 131 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSG
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCc
Confidence 99999994 44 344 3455677777774
No 284
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.16 E-value=8.1e-11 Score=126.61 Aligned_cols=113 Identities=19% Similarity=0.143 Sum_probs=97.1
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|++++..+..+.++++|++|+|++|++++.++. +.++++|+.|+|++|++++..|..+.++++|+.|
T Consensus 107 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 107 KLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 457899999999999977777789999999999999999988887 6889999999999999998777788999999999
Q ss_pred ccccccccccccccc--ccccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|++..|..+ ++.+..+.+.+|+-.|..+
T Consensus 187 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999999996555433 3556778889998777664
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.16 E-value=3.2e-11 Score=133.58 Aligned_cols=107 Identities=18% Similarity=0.270 Sum_probs=90.8
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|+|+ .+|..++++++|+.|+|++|++++.++.+.++++|++|+|++|++.+.+|..++++++|+.|+|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 567889999999988 8888899999999999999999987777888899999999999998899998999999999999
Q ss_pred cccccccccccccc--cccccccccCCccc
Q 002409 493 QNNMLSGTVPSSLL--SKNVVLNYAGNINL 520 (927)
Q Consensus 493 ~~N~l~g~iP~~l~--~~~~~l~~~~n~~l 520 (927)
++|++.+.+|..+. +.+..+++.+|...
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 99988888888763 44567777887644
No 286
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.14 E-value=9.5e-11 Score=127.49 Aligned_cols=112 Identities=31% Similarity=0.383 Sum_probs=97.0
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. +..+++|+.|+|++|+|++..+..+.++++|+.|
T Consensus 98 ~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 356899999999999977677899999999999999999988776 6889999999999999996555567889999999
Q ss_pred cccccccccccccccccc--cccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLLSK--NVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~~~--~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+ .+|..++.. +..+.+.+|+-.|.+.
T Consensus 178 ~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 178 LLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp ECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred ECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 99999999 899888654 5677889999888764
No 287
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.12 E-value=1.5e-10 Score=122.91 Aligned_cols=105 Identities=24% Similarity=0.284 Sum_probs=66.2
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.|++..|..+.++++|++|+|++|+|++.++. +.++++|++|+|++|+|++..+..+.++++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 35667777777777766666666677777777777777666554 56667777777777777655555566677777777
Q ss_pred cccccccccccc-cc--ccccccccccCCc
Q 002409 492 VQNNMLSGTVPS-SL--LSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~-~l--~~~~~~l~~~~n~ 518 (927)
|++|+|+ .+|. .+ ++.+..+++.+|.
T Consensus 138 Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 138 LNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred CcCCcCC-ccCHHHcCcCcCCCEEECCCCc
Confidence 7777776 3433 22 2344555556653
No 288
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.11 E-value=1.2e-10 Score=125.22 Aligned_cols=105 Identities=25% Similarity=0.301 Sum_probs=82.6
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
+.++.|+|++|++++..+..+.++++|++|+|++|+|++..+. +.++++|++|+|++|++++..+..+.++++|+.|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 4588899999999866666888999999999999999876666 578999999999999998766667888899999999
Q ss_pred ccccccccccccc--ccccccccccCCc
Q 002409 493 QNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 493 ~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
++|++++..|..+ ++.+..+.+.+|.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 9999984443333 3455667777773
No 289
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.09 E-value=1e-10 Score=140.55 Aligned_cols=113 Identities=19% Similarity=0.132 Sum_probs=94.8
Q ss_pred eeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCC
Q 002409 405 WLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG 475 (927)
Q Consensus 405 ~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g 475 (927)
-+.|+..+ ++.++.|||++|+|++..|..|.+|++|++|+|++|+|++..|. |.+|++|++|+|++|+|++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 46787532 24789999999999977777899999999999999999998886 8999999999999999997
Q ss_pred CCCccccCCCcccccccccccccccccccc---ccccccccccCCc
Q 002409 476 PLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNI 518 (927)
Q Consensus 476 ~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l---~~~~~~l~~~~n~ 518 (927)
..|..|.+|++|++|+|++|+|+ .+|... ++.+..+++.+|.
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~ 159 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNL 159 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSC
T ss_pred CCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCc
Confidence 66678999999999999999999 555543 3455677777774
No 290
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.09 E-value=9.8e-11 Score=130.43 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=75.4
Q ss_pred EEecCC-CCCccCCchhhcCCCCcEEeccC-CcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccccccc
Q 002409 419 IHLSSK-NLTGNIPSDLTKLSSLVELWLDG-NSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 495 (927)
Q Consensus 419 L~L~~n-~l~g~ip~~i~~L~~L~~L~Ls~-N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N 495 (927)
++++++ +|+ .||. |..+++|+.|+|++ |+|++.+|. |.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 355555 677 4777 88888888888885 888877765 778888888888888888777777888888888888888
Q ss_pred ccccccccccccc--cccccccCCcccccC
Q 002409 496 MLSGTVPSSLLSK--NVVLNYAGNINLHEG 523 (927)
Q Consensus 496 ~l~g~iP~~l~~~--~~~l~~~~n~~l~~~ 523 (927)
+|+ .+|..++.. +..|.+.+|+-.|.+
T Consensus 91 ~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 91 ALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred ccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 888 566655443 456667777766654
No 291
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.08 E-value=2.8e-10 Score=121.45 Aligned_cols=138 Identities=18% Similarity=0.107 Sum_probs=107.3
Q ss_pred HhccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-CCCccceecceeecCeEEEEEEeccCCc
Q 002409 603 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGT 681 (927)
Q Consensus 603 ~~~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~~gs 681 (927)
+...++.|+.+.||+.... ++.+++|+...........+.+|+++++.+. |..+.++++++...+..++||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 3456788888999999865 7899999987532233456899999999984 6778889999988889999999999999
Q ss_pred hhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC------------------------------------------
Q 002409 682 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------ 719 (927)
Q Consensus 682 L~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------------ 719 (927)
|.+.+.. ......++.+++++|+.||+..
T Consensus 97 l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 97 CSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp HHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred hhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 8775311 1122367889999999999810
Q ss_pred --------------CCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 720 --------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 720 --------------~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
...++|+|++|.|||++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1369999999999999876566799999764
No 292
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.06 E-value=1.7e-10 Score=129.44 Aligned_cols=92 Identities=22% Similarity=0.263 Sum_probs=57.8
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|+|++..|..|.+|++|++|+|++|+|++..+. |.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 34566666666666655555566666666666666666665554 56666666666666666655566666666666666
Q ss_pred cccccccccccccc
Q 002409 492 VQNNMLSGTVPSSL 505 (927)
Q Consensus 492 l~~N~l~g~iP~~l 505 (927)
|++|+|+ .+|..+
T Consensus 143 L~~N~l~-~l~~~~ 155 (361)
T 2xot_A 143 LSQNQIS-RFPVEL 155 (361)
T ss_dssp CCSSCCC-SCCGGG
T ss_pred CCCCcCC-eeCHHH
Confidence 6666666 455544
No 293
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.06 E-value=4.3e-10 Score=120.75 Aligned_cols=112 Identities=23% Similarity=0.242 Sum_probs=97.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.+++..+..+.++++|++|+|++|.|++..+. +.++++|+.|+|++|++++..|..+.++++|+.|
T Consensus 107 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 186 (270)
T 2o6q_A 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTL 186 (270)
T ss_dssp TCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred cccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEE
Confidence 356899999999999987777899999999999999999988776 7899999999999999998777789999999999
Q ss_pred cccccccccccccccc---cccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+ .+|...+ ..+..+.+.+|+-.|.+.
T Consensus 187 ~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 187 KLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ECCCCcCC-cCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 99999999 5666543 455778899999888764
No 294
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.05 E-value=2.9e-10 Score=113.81 Aligned_cols=91 Identities=22% Similarity=0.317 Sum_probs=81.4
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.|++..+..+.++++|+.|+|++|+|++.++. +.++++|++|+|++|+|++..+..+..+++|+.|
T Consensus 50 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 129 (177)
T 2o6r_A 50 KLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 129 (177)
T ss_dssp TCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEE
Confidence 356899999999999966666789999999999999999998887 6889999999999999996655567899999999
Q ss_pred cccccccccccc
Q 002409 491 YVQNNMLSGTVP 502 (927)
Q Consensus 491 ~l~~N~l~g~iP 502 (927)
+|++|++++..|
T Consensus 130 ~l~~N~~~~~~~ 141 (177)
T 2o6r_A 130 WLHTNPWDCSCP 141 (177)
T ss_dssp ECCSSCBCCCHH
T ss_pred EecCCCeeccCc
Confidence 999999998776
No 295
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.05 E-value=1.5e-10 Score=133.73 Aligned_cols=114 Identities=22% Similarity=0.250 Sum_probs=98.3
Q ss_pred eecCCCC-------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC--CCCCCCccEEEecCCCcCCC
Q 002409 406 LQCNSDP-------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD--FSGCPDLRIIHLEDNQLTGP 476 (927)
Q Consensus 406 v~C~~~~-------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~--~~~l~~L~~L~Ls~N~l~g~ 476 (927)
+.|+... .++|++|+|++|.+++..|..|.+|++|++|+|++|.+.+.++. |.++++|++|+|++|++++.
T Consensus 15 ~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~ 94 (455)
T 3v47_A 15 AICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQL 94 (455)
T ss_dssp EECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEE
T ss_pred cCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCcc
Confidence 7787543 25799999999999988899999999999999999999987753 89999999999999999998
Q ss_pred CCccccCCCccccccccccccccccccc--c--ccccccccccCCcc
Q 002409 477 LPSSLMNLPNLRELYVQNNMLSGTVPSS--L--LSKNVVLNYAGNIN 519 (927)
Q Consensus 477 ~P~~l~~l~~L~~L~l~~N~l~g~iP~~--l--~~~~~~l~~~~n~~ 519 (927)
.|..++++++|+.|+|++|++++.+|.. + +..+..+.+.+|..
T Consensus 95 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l 141 (455)
T 3v47_A 95 ETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNI 141 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBC
T ss_pred ChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCcc
Confidence 8999999999999999999999877654 3 34566777777753
No 296
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.05 E-value=4.3e-10 Score=120.95 Aligned_cols=107 Identities=25% Similarity=0.241 Sum_probs=87.0
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.+++..+..+.++++|++|+|++|++++.++. +.++++|++|+|++|++++..|..+.++++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 356899999999999977777788999999999999999988877 6889999999999999997777778899999999
Q ss_pred ccccccccccccccc--ccccccccccCCc
Q 002409 491 YVQNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
+|++|+|++..|..+ ++.+..+.+.+|.
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 999999994444332 3455677777774
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.05 E-value=2.1e-10 Score=123.97 Aligned_cols=113 Identities=22% Similarity=0.286 Sum_probs=96.4
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.+++..+..+.++++|+.|+|++|++++..+. +.++++|++|+|++|++++..|..+.++++|+.|
T Consensus 127 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 206 (285)
T 1ozn_A 127 GLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206 (285)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEe
Confidence 356899999999999976666799999999999999999988776 8889999999999999999889999999999999
Q ss_pred ccccccccccccccc--ccccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|++..|..+ ++.+..+++.+|+-.|...
T Consensus 207 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 207 YLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp ECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred eCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 999999995433333 3456778889998877664
No 298
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.04 E-value=4.2e-10 Score=122.35 Aligned_cols=107 Identities=27% Similarity=0.309 Sum_probs=94.4
Q ss_pred CCCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccc
Q 002409 411 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 489 (927)
Q Consensus 411 ~~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~ 489 (927)
...++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++.+|. |.++++|++|+|++|+|++..|..+..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 35678999999999999 8999999999999999999999998876 899999999999999999777777899999999
Q ss_pred ccccccccccccccccc---cccccccccCCcc
Q 002409 490 LYVQNNMLSGTVPSSLL---SKNVVLNYAGNIN 519 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~ 519 (927)
|+|++|+|+ .+|...+ ..+..+.+.+|.-
T Consensus 153 L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 153 LSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp EECTTSCCS-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCC-ccCHHHhcCcCCCCEEECCCCcC
Confidence 999999999 7887764 3456777788753
No 299
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.04 E-value=1.8e-10 Score=138.30 Aligned_cols=113 Identities=19% Similarity=0.189 Sum_probs=100.7
Q ss_pred CCCceEEEEecCCCC-CccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccc
Q 002409 412 PQPSITVIHLSSKNL-TGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 489 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l-~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~ 489 (927)
..+.++.|+|++|.+ .+.+|..+..|++|+.|+|++|+|++.+|. |.++++|++|+|++|+|++..|..+.++++|+.
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 457899999999975 456788999999999999999999999887 899999999999999999888889999999999
Q ss_pred ccccccccccccccccc---cccccccccCCcccccCC
Q 002409 490 LYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~~ 524 (927)
|+|++|+|++..|..+. +.+..+++.+|+-.|.+.
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999987777764 456778999999998874
No 300
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.03 E-value=2.4e-10 Score=131.90 Aligned_cols=112 Identities=21% Similarity=0.235 Sum_probs=94.4
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.+++..|..+.++++|+.|+|++|.+++.+|. +.++++|++|+|++|++++..|..+.++++|+.|
T Consensus 297 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 376 (455)
T 3v47_A 297 HFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKEL 376 (455)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEE
Confidence 356899999999999988888899999999999999999888776 7889999999999999998888899999999999
Q ss_pred cccccccccccccccc---cccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+ .+|...+ +.+..+.+.+|+-.|..+
T Consensus 377 ~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 377 ALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp ECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999 4666543 455778888998877765
No 301
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.03 E-value=2.9e-10 Score=126.57 Aligned_cols=98 Identities=27% Similarity=0.277 Sum_probs=84.3
Q ss_pred CcceeecCCC----------CCCceEEEEecC-CCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEec
Q 002409 402 PWSWLQCNSD----------PQPSITVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLE 469 (927)
Q Consensus 402 ~~~~v~C~~~----------~~~~l~~L~L~~-n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls 469 (927)
.|..+.|+.. ..++|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++.+|. |.+|++|++|+|+
T Consensus 9 ~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred cCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 5778899765 235699999996 999987778999999999999999999999997 7999999999999
Q ss_pred CCCcCCCCCccccCCCccccccccccccccc
Q 002409 470 DNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 500 (927)
Q Consensus 470 ~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~ 500 (927)
+|+|++..|..+..++ |+.|+|++|+|...
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9999965555555555 99999999999843
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.02 E-value=2.5e-10 Score=124.74 Aligned_cols=113 Identities=19% Similarity=0.179 Sum_probs=97.0
Q ss_pred CCCceEEEEecCCCCCc-cCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccc
Q 002409 412 PQPSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 489 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g-~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~ 489 (927)
..++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.+|. +.++++|+.|+|++|++++..+..+..+++|+.
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 35689999999999987 6888999999999999999999998775 788999999999999999777778999999999
Q ss_pred cccccccccccccccccc---ccccccccCCcccccCC
Q 002409 490 LYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 524 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l~~---~~~~l~~~~n~~l~~~~ 524 (927)
|+|++|++++..|..+.. .+..+++.+|+-.|.+.
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 999999999888877643 45778889998777653
No 303
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.02 E-value=1.8e-10 Score=136.40 Aligned_cols=105 Identities=23% Similarity=0.197 Sum_probs=90.0
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
++|+.|+|++|++++..|..+.++++|++|+|++|++++.+|. +.++++|++|+|++|++++..|..++++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 5799999999999988888999999999999999999998875 899999999999999999877777999999999999
Q ss_pred ccccccc-cccccc--ccccccccccCCc
Q 002409 493 QNNMLSG-TVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 493 ~~N~l~g-~iP~~l--~~~~~~l~~~~n~ 518 (927)
++|++++ .+|..+ ++.+..+.+.+|.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCcccccchhhhhhccCCccEEECCCCc
Confidence 9999986 355544 3445666666664
No 304
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.01 E-value=2e-10 Score=115.03 Aligned_cols=156 Identities=17% Similarity=0.092 Sum_probs=94.1
Q ss_pred EEeeeccCCCCCCCccCCCCCCCCccccCccccccccccccCcccccccccccCCCCCCCChHHHHhhcccccCCceEEe
Q 002409 193 VSARINFGADSEAPVRYPDDPFDRIWESDSLKKANYLVDVAAGTEKVSTKLPIDLRSDELPPQKVMQTAVVGTNGSLTYR 272 (927)
Q Consensus 193 ~~~r~~~g~~~~~~iryp~D~~dR~W~p~~~~~~~~~~~~~~~~~~~st~~~i~~~~~~~pP~~V~qtA~t~~~~~l~~~ 272 (927)
.+.|.|||+.. +. |..+|.|++|......... ..... .+.....+.+|+.|+|||=... .+++|.
T Consensus 6 ~~~~INcGg~~---~~---d~~gr~w~~D~~~~~~g~~------~~~~~--~~~~~~~~~~~~~lY~TaR~~~-~~~tY~ 70 (174)
T 2jwp_A 6 VIWAVNAGGES---HV---DVHGIHYRKDPLEGRVGRA------SDYGM--KLPILRSNPEDQVLYQTERYNE-DSFGYD 70 (174)
T ss_dssp EEEEEEETSSS---EE---ETTTEEECSSCSSTTCCCC------CCCCT--TSCCSSSCHHHHHTTTCCCCCC-SCEEEE
T ss_pred EEEEEECCCCC---cc---CCCCCEEcCCcCcccCCcc------ccccc--ceEecccCCCCchhhhhhccCC-CCeEEE
Confidence 35699999843 22 6789999998532210100 00001 1111223456899999996643 468899
Q ss_pred ecCCCCCCcceeEEeeccccCCCCCcceEEEEEECCccccccceeccccccCcc-eEEecccccc---------ccccce
Q 002409 273 LNLDGFPGFGWAVTYFAEIEDLDPDESRKFRLVLPGQPDVSKAIVNIQENAQGK-YRVYEPGYTN---------LSLPFV 342 (927)
Q Consensus 273 ~~~~~~~~~~y~~~yFae~~~~~~~~~R~F~i~in~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~ 342 (927)
++++..- .+.+.|||+|+.. ...+.|+|||+|||+.+.+++++.-....... +.-+....++ ....+.
T Consensus 71 f~v~~~G-~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~ 148 (174)
T 2jwp_A 71 IPIKEEG-EYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGK 148 (174)
T ss_dssp EECCSCE-EEEEEEEEECCSC-CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSE
T ss_pred EEeCCCe-EEEEEEEEecccc-CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCe
Confidence 9876443 4467999999985 45789999999999998887665422221111 1111111000 012345
Q ss_pred eeeecccccccccCcccchhhhchh
Q 002409 343 LSFKFGKTYDSSRGPLLNAMEINKY 367 (927)
Q Consensus 343 ~~~~~~~t~~s~lpPlina~e~~~~ 367 (927)
+.+.+.+. ..-.|+|||+|+++-
T Consensus 149 L~I~f~p~--~~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 149 LSVEFVKG--YYDNPKVCALFIMKG 171 (174)
T ss_dssp EEEEEECS--SSCSSSEEEEEEESS
T ss_pred EEEEEecc--CCCCcEEEEEEEEeC
Confidence 67777753 356799999999853
No 305
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.01 E-value=2.5e-10 Score=116.58 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=82.8
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.+++..|..+++|++|++|+|++|++++..|. +..+++|++|+|++|++.+.+| .+..+++|+.|+
T Consensus 87 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 87 LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred CCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 46788999999999887888899999999999999999886665 7888999999999998444676 688889999999
Q ss_pred ccccccccccccccccccccccccCCc
Q 002409 492 VQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
|++|++++..+-.-++.+..+.+.+|+
T Consensus 166 l~~n~i~~~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 166 IQFDGVHDYRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CTTBCCCCCTTGGGCSSCCEEEECBC-
T ss_pred CCCCCCcChHHhccCCCCCEEEeeCcc
Confidence 999998853233334556777777775
No 306
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.00 E-value=5e-10 Score=114.09 Aligned_cols=91 Identities=23% Similarity=0.322 Sum_probs=82.1
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.|++..+..|.+|++|+.|+|++|+|++..|. |.++++|++|+|++|+|++..+..+..+++|+.|
T Consensus 52 ~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (193)
T 2wfh_A 52 NYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 131 (193)
T ss_dssp GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred cccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEE
Confidence 356899999999999987778899999999999999999999886 8999999999999999996666679999999999
Q ss_pred cccccccccccc
Q 002409 491 YVQNNMLSGTVP 502 (927)
Q Consensus 491 ~l~~N~l~g~iP 502 (927)
+|++|.+...-.
T Consensus 132 ~L~~N~~~C~c~ 143 (193)
T 2wfh_A 132 AIGANPLYCDCN 143 (193)
T ss_dssp ECCSSCEECSGG
T ss_pred EeCCCCeecCCc
Confidence 999999985443
No 307
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.99 E-value=4.3e-10 Score=126.21 Aligned_cols=116 Identities=22% Similarity=0.253 Sum_probs=96.2
Q ss_pred cceeecCCCC--------CCceEEEEecCCCCCccCCchhh-cCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 403 WSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 403 ~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~-~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
+..+.|+... ...++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|. |.++++|++|+|++|+
T Consensus 20 ~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 20 SNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp TTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 4557786533 24588999999999977777777 999999999999999998886 8999999999999999
Q ss_pred cCCCCCccccCCCcccccccccccccccccccc--ccccccccccCCc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
|++..+..|.++++|+.|+|++|+|++..|..+ +..+..|.+.+|.
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 147 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCc
Confidence 997777789999999999999999995555555 3455677777774
No 308
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.99 E-value=3.8e-10 Score=134.17 Aligned_cols=85 Identities=27% Similarity=0.344 Sum_probs=49.5
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCC-CccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL-PSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~-P~~l~~l~~L~~L~ 491 (927)
+++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|++ +|.+++|++|++|+|++|+|++.+ |..++.|++|+.|+
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 345556666666655 555556666666666666666655 345555566666666666665544 55555666666666
Q ss_pred cccccccc
Q 002409 492 VQNNMLSG 499 (927)
Q Consensus 492 l~~N~l~g 499 (927)
|++|+|++
T Consensus 540 L~~N~l~~ 547 (567)
T 1dce_A 540 LQGNSLCQ 547 (567)
T ss_dssp CTTSGGGG
T ss_pred ecCCcCCC
Confidence 66666653
No 309
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.99 E-value=3.6e-10 Score=134.42 Aligned_cols=101 Identities=32% Similarity=0.429 Sum_probs=89.1
Q ss_pred ceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccccc
Q 002409 415 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 494 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~ 494 (927)
.|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+..++.+++|++|+.|+|++|+|++ +| .+++|++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 48899999999996 787 999999999999999999443458999999999999999997 78 899999999999999
Q ss_pred ccccccc-cccc--ccccccccccCCcc
Q 002409 495 NMLSGTV-PSSL--LSKNVVLNYAGNIN 519 (927)
Q Consensus 495 N~l~g~i-P~~l--~~~~~~l~~~~n~~ 519 (927)
|+|++.. |..+ ++.+..+++.+|+-
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 9999776 8877 45567888888864
No 310
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.98 E-value=6.1e-10 Score=133.62 Aligned_cols=88 Identities=20% Similarity=0.290 Sum_probs=41.4
Q ss_pred ceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 415 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
+|+.|+|++|.|++..|..|+++++|+.|+|++|.|++.+|. |+++++|++|+|++|+|++..+..|+++++|+.|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 344444555555444444445555555555555555544443 3445555555555555543222233445555555555
Q ss_pred ccccccccc
Q 002409 494 NNMLSGTVP 502 (927)
Q Consensus 494 ~N~l~g~iP 502 (927)
+|.|++..|
T Consensus 156 ~N~l~~~~~ 164 (597)
T 3oja_B 156 NNNLERIED 164 (597)
T ss_dssp SSCCCBCCT
T ss_pred CCcCCCCCh
Confidence 555543333
No 311
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.98 E-value=3.7e-10 Score=138.40 Aligned_cols=91 Identities=32% Similarity=0.375 Sum_probs=60.9
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
+++|+.|+|++|.|+ .||..|++|++|+.|+|++|+|+..++.+.+|++|++|+|++|+|+ .+|..|++|++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 456667777777776 6676677777777777777777633223666777777777777665 66666777777777777
Q ss_pred ccccccccccccc
Q 002409 493 QNNMLSGTVPSSL 505 (927)
Q Consensus 493 ~~N~l~g~iP~~l 505 (927)
++|+|+|.+|..+
T Consensus 324 ~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 324 EGNPLEKQFLKIL 336 (727)
T ss_dssp TTSCCCSHHHHHH
T ss_pred CCCccCCCChHHH
Confidence 7777776666655
No 312
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.97 E-value=1.4e-09 Score=115.37 Aligned_cols=130 Identities=19% Similarity=0.127 Sum_probs=97.4
Q ss_pred ccc-ccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCc--cceecceeecCeEEEEEEeccCCch
Q 002409 606 KIG-SGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL--VQFLGYCQEEGRSVLVYEFMHNGTL 682 (927)
Q Consensus 606 ~IG-~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnI--v~l~g~~~~~~~~~lV~E~~~~gsL 682 (927)
.++ .|..+.||+....+|+.+++|+.... ....+..|+++++.+.+.++ .+++++....+..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55569999998777888999997643 23568899999999965554 4588888877788999999999888
Q ss_pred hhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC-------------------------------------------
Q 002409 683 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------- 719 (927)
Q Consensus 683 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------------- 719 (927)
. ... .. ...++.++++.|..||+..
T Consensus 103 ~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 103 L--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp T--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred C--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 4 211 01 1246677778888888642
Q ss_pred ------------CCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 720 ------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 720 ------------~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
...++|+|++|.|||++.++.+.|+||+.+.
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999875
No 313
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.97 E-value=7.8e-10 Score=118.90 Aligned_cols=105 Identities=18% Similarity=0.124 Sum_probs=88.3
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
++|+.|+|++|++++..+..+.++++|++|+|++|++++..+. +.++++|++|+|++|++++..|..+.++++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4699999999999977777899999999999999999987774 888999999999999999888888999999999999
Q ss_pred ccccccccccccc--ccccccccccCCc
Q 002409 493 QNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 493 ~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
++|++++..+..+ ++.+..+.+.+|.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 135 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNL 135 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCc
Confidence 9999995444343 3455667777774
No 314
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.97 E-value=5.1e-10 Score=135.35 Aligned_cols=108 Identities=22% Similarity=0.246 Sum_probs=98.0
Q ss_pred CceEEEEecCCCCCccCCchhh--cCCCCcEEeccCCcCCCCCCCCCCCCCccEEEe------cCCCcCCCCCccccCCC
Q 002409 414 PSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHL------EDNQLTGPLPSSLMNLP 485 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~--~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L------s~N~l~g~~P~~l~~l~ 485 (927)
++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++.++.+.++++|+.|+| ++|++.+.+|..+++++
T Consensus 488 ~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 488 YLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 48999999999999 8999998 999999999999999994334889999999999 56889999999999999
Q ss_pred ccccccccccccccccccccccccccccccCCcccccC
Q 002409 486 NLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 523 (927)
Q Consensus 486 ~L~~L~l~~N~l~g~iP~~l~~~~~~l~~~~n~~l~~~ 523 (927)
+|+.|+|++|+| +.+|..+.+.+..+++++|+..|..
T Consensus 567 ~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp SCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred CCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 999999999999 6999999988899999999877644
No 315
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.97 E-value=7.1e-10 Score=110.96 Aligned_cols=102 Identities=19% Similarity=0.158 Sum_probs=83.6
Q ss_pred CceEEEEecCCCCCccCCchhhcCC-CCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~-~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.+|+.|+|++|+++ .+|. +..+. +|+.|+|++|.|++. +.+.++++|++|+|++|+|++..|..+..+++|+.|+|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 47999999999999 5664 66665 999999999999986 78999999999999999999644444589999999999
Q ss_pred ccccccccccc--cc--ccccccccccCCcc
Q 002409 493 QNNMLSGTVPS--SL--LSKNVVLNYAGNIN 519 (927)
Q Consensus 493 ~~N~l~g~iP~--~l--~~~~~~l~~~~n~~ 519 (927)
++|+|+ .+|. .+ ++.+..+.+.+|+.
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCC
Confidence 999997 7776 44 34456778888864
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.97 E-value=9.5e-10 Score=118.82 Aligned_cols=106 Identities=21% Similarity=0.280 Sum_probs=87.3
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.+++..|..+.++++|++|+|++|.+++..+. +.++++|++|+|++|++++..+..+.++++|+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 46889999999999987788888899999999999999887776 78899999999999999866666788899999999
Q ss_pred ccccccccccccccc--cccccccccCCc
Q 002409 492 VQNNMLSGTVPSSLL--SKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~~l~--~~~~~l~~~~n~ 518 (927)
|++|++++..|..+. +.+..+++.+|.
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCc
Confidence 999999876676663 445667777774
No 317
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.96 E-value=3.9e-10 Score=135.26 Aligned_cols=112 Identities=16% Similarity=0.112 Sum_probs=91.9
Q ss_pred CCCceEEEEecCCCCCc-cCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccc
Q 002409 412 PQPSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 489 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g-~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~ 489 (927)
..++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.+|. +.++++|++|+|++|++++.+|..+.++++|+.
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 525 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLST 525 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCE
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCE
Confidence 45678888888888887 3788888888888888888888888776 788888899999999888888888888888999
Q ss_pred cccccccccccccccccc---ccccccccCCcccccCC
Q 002409 490 LYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 524 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l~~---~~~~l~~~~n~~l~~~~ 524 (927)
|+|++|+|+ .+|..+.. .+..+.+.+|+-.|.++
T Consensus 526 L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 526 LDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred EECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999888 78877543 35677888888877664
No 318
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.96 E-value=2.2e-10 Score=111.14 Aligned_cols=89 Identities=24% Similarity=0.322 Sum_probs=78.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCC-CCccccCCCcccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP-LPSSLMNLPNLRE 489 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~-~P~~l~~l~~L~~ 489 (927)
..++|+.|+|++|.+++. ..++++++|+.|+|++|.+++.+|. +.++++|++|+|++|++++. .|..+..+++|+.
T Consensus 40 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 40 EFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp TCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCE
T ss_pred hcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCE
Confidence 457899999999999965 7899999999999999999998887 45699999999999999973 4588999999999
Q ss_pred ccccccccccccc
Q 002409 490 LYVQNNMLSGTVP 502 (927)
Q Consensus 490 L~l~~N~l~g~iP 502 (927)
|++++|++++..+
T Consensus 118 L~l~~N~l~~~~~ 130 (149)
T 2je0_A 118 LDLFNCEVTNLND 130 (149)
T ss_dssp EECTTCGGGGSTT
T ss_pred EeCcCCcccchHH
Confidence 9999999995433
No 319
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.95 E-value=9.9e-10 Score=131.71 Aligned_cols=124 Identities=24% Similarity=0.237 Sum_probs=87.8
Q ss_pred CCCCCCC-CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCcc
Q 002409 395 GDPCLPV-PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR 464 (927)
Q Consensus 395 ~dpC~~~-~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~ 464 (927)
.+||... .-..+.|+... .++|+.|+|++|.+++..+..|.++++|++|+|++|++++..|. |.++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 4667421 11246776422 35688888888888877777888888888888888888887775 77888888
Q ss_pred EEEecCCCcCCCCCccccCCCcccccccccccccccccccc--ccccccccccCCc
Q 002409 465 IIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 465 ~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
+|+|++|++++..|..++++++|++|+|++|++++..|..+ +..+..+++.+|.
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 139 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNF 139 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSC
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCc
Confidence 88888888887778888888888888888888874443444 2344556666664
No 320
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.95 E-value=5.9e-10 Score=124.46 Aligned_cols=121 Identities=25% Similarity=0.230 Sum_probs=96.7
Q ss_pred CCCCCCCCCccee-ecCCC--------CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCc
Q 002409 394 GGDPCLPVPWSWL-QCNSD--------PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDL 463 (927)
Q Consensus 394 ~~dpC~~~~~~~v-~C~~~--------~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L 463 (927)
...+| .|.++ .|+.. -.++|+.|+|++|++++..+..+.++++|+.|+|++|++++..|. +.++++|
T Consensus 26 ~~~~C---~~~~~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (353)
T 2z80_A 26 ASLSC---DRNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL 102 (353)
T ss_dssp -CCEE---CTTSEEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cCCCC---CCCeEeeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCC
Confidence 35566 57775 33322 135899999999999976666899999999999999999998876 8999999
Q ss_pred cEEEecCCCcCCCCCccccCCCcccccccccccccccccc-cc---ccccccccccCCc
Q 002409 464 RIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPS-SL---LSKNVVLNYAGNI 518 (927)
Q Consensus 464 ~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~-~l---~~~~~~l~~~~n~ 518 (927)
++|+|++|++++..+..+.++++|+.|+|++|+++ .+|. .. ++.+..+.+.+|.
T Consensus 103 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp CEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESS
T ss_pred CEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCc
Confidence 99999999999654455999999999999999999 6776 33 3445666777763
No 321
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.95 E-value=1.2e-09 Score=126.21 Aligned_cols=116 Identities=24% Similarity=0.298 Sum_probs=97.5
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.+..+.|+... .++++.|+|++|+|++..|..|.+|++|+.|+|++|+|++..|. |.++++|++|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 35668887533 35799999999999998899999999999999999999998876 8999999999999999
Q ss_pred cCCCCCccccCCCccccccccccccccccccccc---cccccccccCCc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNI 518 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~ 518 (927)
|++..+..+.++++|+.|+|++|+|+ .+|...+ +.+..+.+.+|.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~ 182 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELK 182 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCC
Confidence 99776777999999999999999999 6776544 344556666643
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.95 E-value=1.3e-09 Score=117.11 Aligned_cols=105 Identities=24% Similarity=0.323 Sum_probs=57.5
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.+++..+..+.++++|++|+|++|.+++..+. +.++++|++|+|++|++++..+..+.++++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 34556666666666544444555566666666666666555543 55566666666666666554444555566666666
Q ss_pred cccccccc-ccccccc--cccccccccCC
Q 002409 492 VQNNMLSG-TVPSSLL--SKNVVLNYAGN 517 (927)
Q Consensus 492 l~~N~l~g-~iP~~l~--~~~~~l~~~~n 517 (927)
|++|++++ .+|..+. +.+..+++.+|
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred CcCCccceecCchhhccCCCCCEEECCCC
Confidence 66666553 2444442 23344444444
No 323
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.94 E-value=2.9e-10 Score=124.88 Aligned_cols=87 Identities=18% Similarity=0.206 Sum_probs=54.9
Q ss_pred CceEEEEecCCCCCccCCchh--hcCCCCcEEeccCCcCCCCCCCCCCC-----CCccEEEecCCCcCCCCCccccCCCc
Q 002409 414 PSITVIHLSSKNLTGNIPSDL--TKLSSLVELWLDGNSLTGPIPDFSGC-----PDLRIIHLEDNQLTGPLPSSLMNLPN 486 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i--~~L~~L~~L~Ls~N~l~g~~p~~~~l-----~~L~~L~Ls~N~l~g~~P~~l~~l~~ 486 (927)
++|+.|+|++|+++|.+|..+ ..+++|++|+|++|++++.++.+.++ ++|++|+|++|++++..|..++++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 456666666666666666655 66666666666666666662223333 66666666666666655566666666
Q ss_pred cccccccccccccc
Q 002409 487 LRELYVQNNMLSGT 500 (927)
Q Consensus 487 L~~L~l~~N~l~g~ 500 (927)
|+.|+|++|+++|.
T Consensus 175 L~~L~Ls~N~l~~~ 188 (312)
T 1wwl_A 175 LSTLDLSDNPELGE 188 (312)
T ss_dssp CCEEECCSCTTCHH
T ss_pred CCEEECCCCCcCcc
Confidence 66666666666654
No 324
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.94 E-value=1.2e-09 Score=127.09 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=96.6
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.|..|.|+... .+.++.|+|++|+|++..|..|.++++|+.|+|++|.+++..|. |.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 35678886533 35789999999999988888999999999999999999998775 8899999999999999
Q ss_pred cCCCCCccccCCCcccccccccccccccccccc--ccccccccccCCc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
+++..+..|.++++|+.|+|++|++++..|..+ +..+..+.+.+|.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~ 139 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTT
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCc
Confidence 996555678999999999999999996666655 3445667777764
No 325
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.94 E-value=1.1e-09 Score=126.20 Aligned_cols=110 Identities=26% Similarity=0.316 Sum_probs=97.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..|. |.++++|+.|+|++|++++..|..|.++++|+.|
T Consensus 183 ~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 260 (440)
T 3zyj_A 183 GLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260 (440)
T ss_dssp TCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEE
T ss_pred cccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEE
Confidence 3578999999999999 677 489999999999999999998886 8999999999999999999999999999999999
Q ss_pred cccccccccccccccc---cccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+ .+|...+ ..+..+.+.+|+-.|.+.
T Consensus 261 ~L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 261 NLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp ECTTSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ECCCCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999999 6666554 455778899999888874
No 326
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.93 E-value=9.5e-10 Score=108.95 Aligned_cols=83 Identities=25% Similarity=0.316 Sum_probs=42.1
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCC-CCCCCccEEEecCCCcCCC-CCccccCCCcccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF-SGCPDLRIIHLEDNQLTGP-LPSSLMNLPNLRELY 491 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~-~~l~~L~~L~Ls~N~l~g~-~P~~l~~l~~L~~L~ 491 (927)
++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|.+ .++++|++|+|++|++++. .+..+..+++|+.|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 3455555555555533 44555555555555555555544442 2355555555555555532 114455555555555
Q ss_pred ccccccc
Q 002409 492 VQNNMLS 498 (927)
Q Consensus 492 l~~N~l~ 498 (927)
|++|+++
T Consensus 127 l~~N~l~ 133 (168)
T 2ell_A 127 LFNCEVT 133 (168)
T ss_dssp CCSSGGG
T ss_pred eeCCcCc
Confidence 5555555
No 327
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.92 E-value=9.2e-10 Score=136.60 Aligned_cols=104 Identities=21% Similarity=0.307 Sum_probs=83.8
Q ss_pred ceEEEEecCCCCCccCCchhh--cCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecC------CCcCCCCCccccCCCc
Q 002409 415 SITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLED------NQLTGPLPSSLMNLPN 486 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~--~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~------N~l~g~~P~~l~~l~~ 486 (927)
+|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++.++.+.++++|+.|+|++ |++.+.+|..+.+|++
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~ 807 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSS
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCC
Confidence 7888888888888 7888887 88888888888888888433477888888888866 7788888888888888
Q ss_pred cccccccccccccccccccccccccccccCCccc
Q 002409 487 LRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINL 520 (927)
Q Consensus 487 L~~L~l~~N~l~g~iP~~l~~~~~~l~~~~n~~l 520 (927)
|+.|+|++|+| +.+|..+.+.+..+++++|+..
T Consensus 808 L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 808 LIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNI 840 (876)
T ss_dssp CCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTC
T ss_pred CCEEECCCCCC-CccCHhhcCCCCEEECCCCCCC
Confidence 88888888888 6888888777777888888643
No 328
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.91 E-value=5.4e-10 Score=111.83 Aligned_cols=100 Identities=20% Similarity=0.277 Sum_probs=84.7
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCC-CCCCCccEEEecCCCcCCCCCc--cccCCCccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF-SGCPDLRIIHLEDNQLTGPLPS--SLMNLPNLREL 490 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~-~~l~~L~~L~Ls~N~l~g~~P~--~l~~l~~L~~L 490 (927)
++|+.|+|++|.|++. +.+.++++|+.|+|++|+|++.+|.+ .++++|++|+|++|+|+ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999964 68999999999999999999887775 88999999999999996 6776 89999999999
Q ss_pred cccccccccccccc----c--ccccccccccCC
Q 002409 491 YVQNNMLSGTVPSS----L--LSKNVVLNYAGN 517 (927)
Q Consensus 491 ~l~~N~l~g~iP~~----l--~~~~~~l~~~~n 517 (927)
+|++|+++ .+|.. + ++.+..++..+|
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEEC
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcC
Confidence 99999998 67764 2 334455555555
No 329
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.91 E-value=5.1e-10 Score=137.15 Aligned_cols=104 Identities=31% Similarity=0.478 Sum_probs=91.8
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCC-CCCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..+.|+.|+|++|.|. .+|..+++|++|+.|+|++|.|+ .+| .+.+|++|++|+|++|+|+ .+|..|++|++|+.|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 4578999999999999 89999999999999999999999 555 4889999999999999999 889999999999999
Q ss_pred cccccccccccccccc--cccccccccCCcc
Q 002409 491 YVQNNMLSGTVPSSLL--SKNVVLNYAGNIN 519 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~--~~~~~l~~~~n~~ 519 (927)
+|++|.|+ .+|.++. ..+..|++.+|.-
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCC
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCcc
Confidence 99999998 8998863 4567778888853
No 330
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.90 E-value=1.3e-09 Score=129.60 Aligned_cols=113 Identities=21% Similarity=0.225 Sum_probs=97.6
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCC-CCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-GPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 489 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~-g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~ 489 (927)
..++|+.|+|++|.+.+.+|..+.++++|+.|+|++|.++ +.+|. +.++++|++|+|++|++++..|..+.++++|+.
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 4578999999999999999999999999999999999998 56775 888999999999999999888999999999999
Q ss_pred cccccccccccccccc--ccccccccccCCcccccCC
Q 002409 490 LYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~l~~~~ 524 (927)
|+|++|+|++..|..+ ++.+..+.+.+|+-.|..+
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999999996555444 3456778889998887765
No 331
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.89 E-value=1.5e-09 Score=118.54 Aligned_cols=108 Identities=24% Similarity=0.287 Sum_probs=93.2
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCC-CCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTG-PIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 489 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g-~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~ 489 (927)
..++|+.|+|++|.+.+..|..+.++++|+.|+|++|.+++ .+|. +.++++|++|+|++|++++..|..+.++++|+.
T Consensus 124 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 203 (306)
T 2z66_A 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 203 (306)
T ss_dssp TCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred hccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCE
Confidence 35689999999999999999999999999999999999998 4565 889999999999999999888999999999999
Q ss_pred cccccccccccccccc--ccccccccccCCcc
Q 002409 490 LYVQNNMLSGTVPSSL--LSKNVVLNYAGNIN 519 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~ 519 (927)
|+|++|++++..+..+ ++.+..+++.+|..
T Consensus 204 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 204 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp EECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred EECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 9999999995444344 34567778888854
No 332
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.89 E-value=2.7e-09 Score=127.93 Aligned_cols=106 Identities=20% Similarity=0.234 Sum_probs=93.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.|++..|..|++|++|++|+|++|.|++.++. |.++++|++|+|++|+|++..|..++++++|+.|
T Consensus 97 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 457899999999999988888899999999999999999988777 6899999999999999999888899999999999
Q ss_pred cccccccccccccccccccccccccCCc
Q 002409 491 YVQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
+|++|.|+ .+|...++.+..+.+.+|.
T Consensus 177 ~L~~N~l~-~~~~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 177 QLSSNRLT-HVDLSLIPSLFHANVSYNL 203 (597)
T ss_dssp ECTTSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred ECcCCCCC-CcChhhhhhhhhhhcccCc
Confidence 99999999 4676666777777776663
No 333
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.89 E-value=1.6e-09 Score=125.27 Aligned_cols=110 Identities=25% Similarity=0.319 Sum_probs=96.6
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|+|++ +| .+..+++|+.|+|++|.|++..|. +.++++|+.|+|++|++++..|..+.++++|+.|
T Consensus 194 ~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 271 (452)
T 3zyi_A 194 GLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271 (452)
T ss_dssp TCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEE
Confidence 35689999999999994 55 589999999999999999998886 8999999999999999999989999999999999
Q ss_pred cccccccccccccccc---cccccccccCCcccccCC
Q 002409 491 YVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~l~~~~ 524 (927)
+|++|+|+ .+|...+ +.+..+.+.+|+-.|.+.
T Consensus 272 ~L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 272 NLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECCSSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred ECCCCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99999999 6666553 455778899999888774
No 334
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.88 E-value=2.1e-09 Score=118.71 Aligned_cols=105 Identities=27% Similarity=0.389 Sum_probs=90.4
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
++|+.|+|++|.+++..|..+.++++|+.|+|++|.+++..+. +.++++|++|+|++|+++ .+|..+..+++|+.|+|
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 5899999999999988899999999999999999999998874 888999999999999999 89999999999999999
Q ss_pred cccccccccccccc---------cccccccccCCccc
Q 002409 493 QNNMLSGTVPSSLL---------SKNVVLNYAGNINL 520 (927)
Q Consensus 493 ~~N~l~g~iP~~l~---------~~~~~l~~~~n~~l 520 (927)
++|+|+ .+|...+ ..+..+.+.+|+..
T Consensus 271 ~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 271 HNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCCcCC-ccChhhcCCcccccccccccceEeecCccc
Confidence 999999 5655443 22345667777653
No 335
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.88 E-value=1.6e-09 Score=135.37 Aligned_cols=90 Identities=24% Similarity=0.214 Sum_probs=52.3
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCC-CC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI-PD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~-p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
++|+.|||++|.+++..|..|.+|++|+.|+|++|.+.+.+ |. |.+|++|++|+|++|++++..|..|.++++|+.|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 45666666666666555556666666666666666554444 22 55556666666666665555555555555666666
Q ss_pred cccccccccccc
Q 002409 492 VQNNMLSGTVPS 503 (927)
Q Consensus 492 l~~N~l~g~iP~ 503 (927)
|++|.+++.+|.
T Consensus 104 Ls~n~l~~~~~~ 115 (844)
T 3j0a_A 104 LYFCGLSDAVLK 115 (844)
T ss_dssp CTTCCCSSCCST
T ss_pred CcCCCCCccccc
Confidence 666655554443
No 336
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.87 E-value=1.2e-09 Score=123.61 Aligned_cols=109 Identities=20% Similarity=0.232 Sum_probs=94.4
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|.+++..|..+.++++|+.|+|++|++++..+.+..+++|++|+|++|+++ .+|..+..+++|+.|+|
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L 325 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEEC
Confidence 46899999999999988899999999999999999999987666778999999999999998 67888889999999999
Q ss_pred cccccccccccccccccccccccCCcccccC
Q 002409 493 QNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 523 (927)
Q Consensus 493 ~~N~l~g~iP~~l~~~~~~l~~~~n~~l~~~ 523 (927)
++|+|+ .+|...++.+..+++.+|+-.|.+
T Consensus 326 ~~N~i~-~~~~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 326 DHNSIV-TLKLSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp CSSCCC-CCCCCTTCCCSEEECCSSCEEHHH
T ss_pred CCCccc-eeCchhhccCCEEEcCCCCccchh
Confidence 999998 677777777888888999766543
No 337
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.87 E-value=1.4e-09 Score=127.85 Aligned_cols=107 Identities=20% Similarity=0.208 Sum_probs=92.5
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCC--CCCC-CCCCCCccEEEecCCCcCCCCCcc-ccCCCcc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTG--PIPD-FSGCPDLRIIHLEDNQLTGPLPSS-LMNLPNL 487 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g--~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~-l~~l~~L 487 (927)
..++|+.|+|++|.+++.+|..+.++++|+.|+|++|++++ .+|. +.++++|++|+|++|++++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 45789999999999998899999999999999999999997 4554 788999999999999999877765 7888999
Q ss_pred ccccccccccccccccccccccccccccCCc
Q 002409 488 RELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 488 ~~L~l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
+.|+|++|++++.+|..+...+..+++++|.
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLPPRIKVLDLHSNK 432 (520)
T ss_dssp CEEECCSSCCCGGGGGSCCTTCCEEECCSSC
T ss_pred CEEECcCCCCCcchhhhhcccCCEEECCCCc
Confidence 9999999999988888887777788888874
No 338
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.86 E-value=4.4e-09 Score=118.94 Aligned_cols=106 Identities=20% Similarity=0.234 Sum_probs=91.4
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
..++|+.|+|++|.+++..|..+.++++|++|+|++|+++..++. +.++++|++|+|++|++++..|..+.++++|+.|
T Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 91 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170 (390)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEE
T ss_pred CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEE
Confidence 457899999999999987788899999999999999999977666 5889999999999999998888889999999999
Q ss_pred cccccccccccccccccccccccccCCc
Q 002409 491 YVQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
+|++|+++ .++...++.+..+.+.+|.
T Consensus 171 ~l~~n~l~-~~~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 171 QLSSNRLT-HVDLSLIPSLFHANVSYNL 197 (390)
T ss_dssp ECCSSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred ECCCCcCC-ccccccccccceeeccccc
Confidence 99999999 4666666777777777663
No 339
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.86 E-value=2.5e-09 Score=128.25 Aligned_cols=116 Identities=18% Similarity=0.096 Sum_probs=95.8
Q ss_pred ceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcC
Q 002409 404 SWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLT 474 (927)
Q Consensus 404 ~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~ 474 (927)
.-+.|+... ...++.|+|++|.+++..|..|+++++|++|+|++|++++..|. |.++++|++|+|++|+++
T Consensus 15 ~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 94 (606)
T 3t6q_A 15 KTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCS
T ss_pred ceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccc
Confidence 347786532 35789999999999988888999999999999999999998886 899999999999999999
Q ss_pred CCCCccccCCCcccccccccccccccccccc--ccccccccccCCcc
Q 002409 475 GPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNIN 519 (927)
Q Consensus 475 g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~ 519 (927)
+..|..++++++|+.|+|++|++++..|..+ ++.+..+.+.+|..
T Consensus 95 ~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l 141 (606)
T 3t6q_A 95 FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI 141 (606)
T ss_dssp EECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCC
T ss_pred ccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcc
Confidence 8889999999999999999999995434444 34556677777743
No 340
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.86 E-value=3.5e-09 Score=121.95 Aligned_cols=117 Identities=21% Similarity=0.292 Sum_probs=96.6
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.+..|.|.... .+.++.|+|++|++++..+..|.+|++|+.|+|++|+|++..+. |.++++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 35568887533 35689999999999988889999999999999999999988775 8999999999999999
Q ss_pred cCCCCCccccCCCccccccccccccccccccccc---cccccccccCCcc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNIN 519 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~~ 519 (927)
|++..+..+..+++|+.|+|++|+|+ .+|...+ +.+..+.+.+|..
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~ 172 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKR 172 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTT
T ss_pred CCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCC
Confidence 99766668999999999999999999 6666443 3445666666543
No 341
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=7.4e-09 Score=115.89 Aligned_cols=140 Identities=16% Similarity=0.304 Sum_probs=104.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEee--cCC-chhhHhHHHHHHHHhhcc--CCCccceecceeec---CeEEEEEEe
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLT--SNS-YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEE---GRSVLVYEF 676 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~--~~~-~~~~~~~~~Ei~iL~~l~--HpnIv~l~g~~~~~---~~~~lV~E~ 676 (927)
+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46889999999999876 4678888765 322 123457889999999997 45577888888766 457999999
Q ss_pred ccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC-------------------------------------
Q 002409 677 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------- 719 (927)
Q Consensus 677 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------- 719 (927)
++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 123 VSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred cCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9998875422 123567778889999999999999721
Q ss_pred ------------------CCceecCCCCCCCeEECCCCc--EEEEeecCccc
Q 002409 720 ------------------VPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKF 751 (927)
Q Consensus 720 ------------------~~~ivHrDLkp~NILl~~~~~--vkL~DFGla~~ 751 (927)
...++|||+++.|||++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998863
No 342
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.85 E-value=2.8e-09 Score=123.95 Aligned_cols=105 Identities=21% Similarity=0.220 Sum_probs=69.2
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.+++..|..|.+|++|++|+|++|+|++..+. |.++++|++|+|++|++++..|..+.++++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 45677777777777766666777777777777777777766554 56677777777777777766666777777777777
Q ss_pred ccccccccccccccc--cccccccccCC
Q 002409 492 VQNNMLSGTVPSSLL--SKNVVLNYAGN 517 (927)
Q Consensus 492 l~~N~l~g~iP~~l~--~~~~~l~~~~n 517 (927)
|++|++++..|..+. ..+..+.+.+|
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n 162 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKC 162 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCC
Confidence 777777644444442 23444555555
No 343
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.85 E-value=9.6e-10 Score=120.67 Aligned_cols=106 Identities=23% Similarity=0.261 Sum_probs=83.2
Q ss_pred CCCceEEEEecCCCCCccCCchhhcC-----CCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCC--CCccc--
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKL-----SSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP--LPSSL-- 481 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L-----~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~--~P~~l-- 481 (927)
..++|+.|+|++|.+++. |..++.+ ++|++|+|++|++++.+|. +.++++|++|+|++|+++|. +|..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 456889999999999876 8888887 8899999999999888864 78899999999999998776 34455
Q ss_pred cCCCcccccccccccccc--ccccccc---cccccccccCCc
Q 002409 482 MNLPNLRELYVQNNMLSG--TVPSSLL---SKNVVLNYAGNI 518 (927)
Q Consensus 482 ~~l~~L~~L~l~~N~l~g--~iP~~l~---~~~~~l~~~~n~ 518 (927)
.++++|+.|+|++|+|++ .+|..++ +.+..+++++|.
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 788899999999999883 4444443 456677777774
No 344
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.85 E-value=3e-09 Score=108.42 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=71.2
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCC-CCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.++ .++.+..+++|++|+|++|++++..| .+.++++|++|+|++|++++..|..+.++++|+.|+
T Consensus 65 l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 356778888877554 33467778888888888888877444 477788888888888888777777777888888888
Q ss_pred cccccccccccccc--ccccccccccCCc
Q 002409 492 VQNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
|++|++.+.+| .+ ++.+..+.+.+|.
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBC
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCC
Confidence 88887333565 23 3344556666653
No 345
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.85 E-value=2.4e-09 Score=128.43 Aligned_cols=111 Identities=23% Similarity=0.240 Sum_probs=74.5
Q ss_pred CCceEEEEecCCCCCcc---CCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccc
Q 002409 413 QPSITVIHLSSKNLTGN---IPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR 488 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~---ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~ 488 (927)
.++|+.|+|++|.+++. .+..+..+++|+.|+|++|++++.+|. +.++++|+.|+|++|++++..|..+.++++|
T Consensus 448 l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L- 526 (606)
T 3t6q_A 448 LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI- 526 (606)
T ss_dssp CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-
T ss_pred CCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-
Confidence 45677777777777652 234566777777777777777776664 6667777777777777777777777777777
Q ss_pred ccccccccccccccccc--ccccccccccCCcccccCC
Q 002409 489 ELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 524 (927)
Q Consensus 489 ~L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~~l~~~~ 524 (927)
.|+|++|++++..|..+ ++.+..+++.+|+-.|.+.
T Consensus 527 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 77777777775545433 3445667777777766553
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.83 E-value=1.5e-09 Score=128.76 Aligned_cols=114 Identities=27% Similarity=0.397 Sum_probs=75.7
Q ss_pred CcCCCCCCCCCC--CCccee-ecCCCCCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccE
Q 002409 389 DWAQEGGDPCLP--VPWSWL-QCNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRI 465 (927)
Q Consensus 389 ~w~~~~~dpC~~--~~~~~v-~C~~~~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~ 465 (927)
+|.. +++||.. ..|.++ .|.. .+|+.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~-~~~~~~~~~~~~~~l~~C~~---~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip--~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEK-QALPGENRNEAVSLLKECLI---NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP--ELPASLEY 104 (571)
T ss_dssp HHHT-TCCTTCCHHHHHHHHHHHHH---TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC--CCCTTCCE
T ss_pred HHhc-cCCccccccchhhhcccccc---CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc--cccCCCCE
Confidence 4654 5778842 247777 5754 267788888888875 776663 67777777777777 455 45677777
Q ss_pred EEecCCCcCCCCCccccCCCccccccccccccccccccccccccccccccCCc
Q 002409 466 IHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 466 L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .++.+..+++++|.
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~ 151 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADNNQ 151 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCCCc
Confidence 7777777775 666 554 67777777777774 666 45555556665553
No 347
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.82 E-value=4.8e-09 Score=124.75 Aligned_cols=102 Identities=22% Similarity=0.224 Sum_probs=85.9
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
++|+.|+|++|.+++..|..|.++++|++|+|++|+|++..|. |.++++|++|+|++|+|+ .+|.. .+++|+.|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 6799999999999977778999999999999999999998776 888999999999999998 68876 8999999999
Q ss_pred ccccccc-ccccccc--cccccccccCCc
Q 002409 493 QNNMLSG-TVPSSLL--SKNVVLNYAGNI 518 (927)
Q Consensus 493 ~~N~l~g-~iP~~l~--~~~~~l~~~~n~ 518 (927)
++|++++ .+|..+. +.+..+++.+|.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~ 157 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAK 157 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSB
T ss_pred CCCCccccCchHhhcccCcccEEecCCCc
Confidence 9999985 3455553 455667777764
No 348
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.82 E-value=3.4e-09 Score=126.11 Aligned_cols=107 Identities=21% Similarity=0.224 Sum_probs=93.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCC--C-CCCCCCCccEEEecCCCcCCCCCcc-ccCCCcc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--P-DFSGCPDLRIIHLEDNQLTGPLPSS-LMNLPNL 487 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~--p-~~~~l~~L~~L~Ls~N~l~g~~P~~-l~~l~~L 487 (927)
..++|+.|+|++|.+++.+|..+.++++|+.|+|++|++++.. | .+.++++|++|+|++|++++.+|.. +..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 4578999999999999989999999999999999999999843 4 3788999999999999999877764 7889999
Q ss_pred ccccccccccccccccccccccccccccCCc
Q 002409 488 RELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 488 ~~L~l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
+.|+|++|+|+|.+|..+...+..+++++|.
T Consensus 431 ~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~ 461 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLPPKVKVLDLHNNR 461 (562)
T ss_dssp CEEECCSSCCCGGGGSSCCTTCSEEECCSSC
T ss_pred CEEECCCCCCCcchhhhhcCcCCEEECCCCc
Confidence 9999999999999988877777888888874
No 349
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.82 E-value=3e-09 Score=117.02 Aligned_cols=108 Identities=15% Similarity=0.128 Sum_probs=91.0
Q ss_pred CCceEEEEecCCCCCccCCchhh-cCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~-~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|++. |....+++|++|+|++|++++ +|..+..+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 46899999999999987777774 799999999999999877 555569999999999999995 666699999999999
Q ss_pred ccccccccccccccc--cccccccccCCcccccC
Q 002409 492 VQNNMLSGTVPSSLL--SKNVVLNYAGNINLHEG 523 (927)
Q Consensus 492 l~~N~l~g~iP~~l~--~~~~~l~~~~n~~l~~~ 523 (927)
|++|+|+ .+|..+. +.+..+.+.+|+..|..
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcC
Confidence 9999999 7887763 45677888999876643
No 350
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.81 E-value=4.4e-09 Score=115.18 Aligned_cols=105 Identities=16% Similarity=0.136 Sum_probs=59.0
Q ss_pred CCceEEEEecCCCCCccCC----chhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCC--CC--ccccC
Q 002409 413 QPSITVIHLSSKNLTGNIP----SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP--LP--SSLMN 483 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip----~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~--~P--~~l~~ 483 (927)
.++|+.|+|++|.+++..+ ..+..+++|++|+|++|++++.+|. +.++++|++|+|++|++++. ++ ..+++
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4556666666666665544 2334566666666666666665554 55666666666666665542 21 22355
Q ss_pred CCcccccccccccccccccc---cc---ccccccccccCCc
Q 002409 484 LPNLRELYVQNNMLSGTVPS---SL---LSKNVVLNYAGNI 518 (927)
Q Consensus 484 l~~L~~L~l~~N~l~g~iP~---~l---~~~~~~l~~~~n~ 518 (927)
+++|+.|+|++|+|+ .+|. .+ +..+..+++++|.
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~ 235 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNS 235 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCC
Confidence 666666666666665 3332 12 2344555555553
No 351
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.80 E-value=1.1e-09 Score=120.08 Aligned_cols=105 Identities=22% Similarity=0.239 Sum_probs=68.7
Q ss_pred CCceEEEEecCCCCCcc--C--CchhhcCCCCcEEeccCCcCCCCCCC----CCCCCCccEEEecCCCcCCCCCccccCC
Q 002409 413 QPSITVIHLSSKNLTGN--I--PSDLTKLSSLVELWLDGNSLTGPIPD----FSGCPDLRIIHLEDNQLTGPLPSSLMNL 484 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~--i--p~~i~~L~~L~~L~Ls~N~l~g~~p~----~~~l~~L~~L~Ls~N~l~g~~P~~l~~l 484 (927)
.++|+.|+|++|++.+. + +..+.++++|++|+|++|+++...+. +.++++|++|+|++|+|++.+|+.++.+
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 45677777777776642 2 22235677777777777777533221 3456777777777777777667666666
Q ss_pred ---CccccccccccccccccccccccccccccccCCc
Q 002409 485 ---PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 485 ---~~L~~L~l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
++|+.|+|++|+|+ .+|..+.+.+..+++++|.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNR 283 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCc
Confidence 57777777777777 6777776666666666663
No 352
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.80 E-value=2.3e-09 Score=126.03 Aligned_cols=101 Identities=20% Similarity=0.219 Sum_probs=59.5
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|. +.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 4566666666666655555666666666666666666665553 566666666666666666 45554 5666666666
Q ss_pred ccccccc-ccccccc--cccccccccCC
Q 002409 493 QNNMLSG-TVPSSLL--SKNVVLNYAGN 517 (927)
Q Consensus 493 ~~N~l~g-~iP~~l~--~~~~~l~~~~n 517 (927)
++|++++ .+|..+. +.+..+++.+|
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n 125 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTT 125 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEES
T ss_pred cCCccccccchhhhccCCcceEEEecCc
Confidence 6666664 3455442 33344444444
No 353
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.79 E-value=7.3e-09 Score=125.97 Aligned_cols=106 Identities=25% Similarity=0.286 Sum_probs=77.7
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|++++..+..|+++++|++|+|++|++++..|. +.++++|++|+|++|++++..|..++++++|+.|+
T Consensus 72 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 151 (680)
T 1ziw_A 72 LPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELL 151 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEE
T ss_pred ccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEE
Confidence 45788888888888843334688888888888888888777664 77788888888888888877777788888888888
Q ss_pred ccccccccccccccc----cccccccccCCc
Q 002409 492 VQNNMLSGTVPSSLL----SKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~~l~----~~~~~l~~~~n~ 518 (927)
|++|++++..|..+. ..+..+++.+|.
T Consensus 152 L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 152 LSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ccCCcccccCHHHhhccccccccEEECCCCc
Confidence 888888865554431 345566666663
No 354
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.79 E-value=8.1e-09 Score=114.12 Aligned_cols=113 Identities=24% Similarity=0.376 Sum_probs=90.3
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.|..+.|+... .++|+.|+|++|++++..|..+.++++|+.|+|++|++++..|. +.++++|++|+|++|+
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 47778886432 35789999999999977777899999999999999999988775 8889999999999999
Q ss_pred cCCCCCccccCCCcccccccccccccccccccc---ccccccccccCCc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNI 518 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l---~~~~~~l~~~~n~ 518 (927)
++ .+|..+. ++|+.|+|++|+++ .+|... ++.+..+.+.+|.
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~ 158 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNP 158 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCC
T ss_pred CC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCc
Confidence 98 7787766 78999999999998 566543 3445666777774
No 355
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.79 E-value=8.1e-09 Score=122.58 Aligned_cols=94 Identities=19% Similarity=0.245 Sum_probs=63.3
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCC-CCCCCCCccEEEecCCCcCC-CCCccccCCCcccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRE 489 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~ 489 (927)
..++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+ .++++++|++|+|++|++++ .+|..++++++|+.
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~ 153 (570)
T 2z63_A 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 153 (570)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCE
T ss_pred CchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCE
Confidence 34567777777777776566667777777777777777766555 36677777777777777765 46777777777777
Q ss_pred cccccccccccccccc
Q 002409 490 LYVQNNMLSGTVPSSL 505 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l 505 (927)
|++++|++++..|..+
T Consensus 154 L~l~~n~l~~~~~~~~ 169 (570)
T 2z63_A 154 LDLSSNKIQSIYCTDL 169 (570)
T ss_dssp EECTTSCCCEECGGGG
T ss_pred EeCcCCccceecHHHc
Confidence 7777777774444433
No 356
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.79 E-value=6.8e-09 Score=129.65 Aligned_cols=106 Identities=21% Similarity=0.230 Sum_probs=77.1
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC---CCCCCCccEEEecCCCcCCCCC-ccccCCCcc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD---FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNL 487 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~---~~~l~~L~~L~Ls~N~l~g~~P-~~l~~l~~L 487 (927)
..++|+.|+|++|.+++..|..|.+|++|++|+|++|.+++.+|. +.++++|++|+|++|++++..| ..+++|++|
T Consensus 71 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L 150 (844)
T 3j0a_A 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSL 150 (844)
T ss_dssp SCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSC
T ss_pred CCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCC
Confidence 345788888888888877788888888888888888888876553 6778888888888888876654 467888888
Q ss_pred ccccccccccccccccccc----cccccccccCC
Q 002409 488 RELYVQNNMLSGTVPSSLL----SKNVVLNYAGN 517 (927)
Q Consensus 488 ~~L~l~~N~l~g~iP~~l~----~~~~~l~~~~n 517 (927)
+.|+|++|++++..|..+. ..+..+.+.+|
T Consensus 151 ~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n 184 (844)
T 3j0a_A 151 KSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAAN 184 (844)
T ss_dssp CEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCS
T ss_pred CEEECCCCcCCeeCHHHcccccCCccceEECCCC
Confidence 8888888888776666553 23344444444
No 357
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.78 E-value=3.4e-09 Score=123.90 Aligned_cols=105 Identities=22% Similarity=0.149 Sum_probs=80.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-----------------CCCCCCccEEEecCCCcC
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-----------------FSGCPDLRIIHLEDNQLT 474 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-----------------~~~l~~L~~L~Ls~N~l~ 474 (927)
..++|+.|+|++|.+++.+| +..+++|++|+|++|.|++..+. ...+++|+.|+|++|+|+
T Consensus 56 ~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~ 133 (487)
T 3oja_A 56 PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKIT 133 (487)
T ss_dssp TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCC
T ss_pred CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCC
Confidence 45688888999888887655 88888888888888877764321 123567888888888888
Q ss_pred CCCCccccCCCccccccccccccccccccccc---cccccccccCCc
Q 002409 475 GPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNI 518 (927)
Q Consensus 475 g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~ 518 (927)
+..|..++++++|+.|+|++|+|+|.+|..+. +.+..+++++|.
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 88888888899999999999999988887764 455667777774
No 358
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.77 E-value=4.3e-09 Score=124.47 Aligned_cols=90 Identities=23% Similarity=0.254 Sum_probs=49.7
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCC-CCCccccCCCcccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELY 491 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g-~~P~~l~~l~~L~~L~ 491 (927)
++|++|+|++|++++..|..|.+|++|++|+|++|++++.+|. +.++++|++|+|++|++++ .+|..++++++|+.|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 4555555555555555555555555555555555555555554 5555555555555555554 2444555555555555
Q ss_pred cccccccccccc
Q 002409 492 VQNNMLSGTVPS 503 (927)
Q Consensus 492 l~~N~l~g~iP~ 503 (927)
|++|++.+.+|.
T Consensus 130 L~~n~~~~~~~~ 141 (549)
T 2z81_A 130 IGNVETFSEIRR 141 (549)
T ss_dssp EEESSSCCEECT
T ss_pred CCCCccccccCH
Confidence 555554444543
No 359
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.77 E-value=4.9e-09 Score=114.89 Aligned_cols=102 Identities=24% Similarity=0.382 Sum_probs=63.6
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
..++|+.|+|++|.+++ ++. +.++++|+.|+|++|++++..+ +.++++|+.|+|++|++++..| +..+++|+.|+
T Consensus 127 ~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~ 201 (308)
T 1h6u_A 127 GLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVH 201 (308)
T ss_dssp TCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEE
Confidence 34567777777777764 333 6677777777777777766444 6667777777777777764332 66677777777
Q ss_pred ccccccccccccccccccccccccCCc
Q 002409 492 VQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
|++|++++..|-.-++.+..+.+.+|+
T Consensus 202 L~~N~l~~~~~l~~l~~L~~L~l~~N~ 228 (308)
T 1h6u_A 202 LKNNQISDVSPLANTSNLFIVTLTNQT 228 (308)
T ss_dssp CTTSCCCBCGGGTTCTTCCEEEEEEEE
T ss_pred ccCCccCccccccCCCCCCEEEccCCe
Confidence 777777744432223444555556664
No 360
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.77 E-value=9.1e-09 Score=125.14 Aligned_cols=104 Identities=24% Similarity=0.246 Sum_probs=56.7
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
++|+.|+|++|.+++..|..+++|++|++|+|++|++++.++. |.++++|++|+|++|++++..|..++++++|+.|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 3455555555555555555555555555555555555554443 555666666666666665544455666666666666
Q ss_pred ccccccccccccc--ccccccccccCC
Q 002409 493 QNNMLSGTVPSSL--LSKNVVLNYAGN 517 (927)
Q Consensus 493 ~~N~l~g~iP~~l--~~~~~~l~~~~n 517 (927)
++|++++..|..+ ++.+..+.+.+|
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CCCcccccCchhhcccccCCEEEccCC
Confidence 6666655444433 223344444544
No 361
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.76 E-value=9.6e-09 Score=113.37 Aligned_cols=114 Identities=25% Similarity=0.362 Sum_probs=77.9
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCC
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 472 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 472 (927)
.+..+.|+... .+.++.|+|++|++++..+..|.++++|++|+|++|++++..|. +.++++|++|+|++|+
T Consensus 32 ~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp ETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred CCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 45667775422 34677788888888866666778888888888888888877664 7778888888888888
Q ss_pred cCCCCCccccCCCcccccccccccccccccccc--ccccccccccCCc
Q 002409 473 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNI 518 (927)
Q Consensus 473 l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l--~~~~~~l~~~~n~ 518 (927)
++ .+|..+. ++|+.|++++|++++..+..+ ++.+..+.+.+|.
T Consensus 112 l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 156 (330)
T 1xku_A 112 LK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNP 156 (330)
T ss_dssp CS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSC
T ss_pred CC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCc
Confidence 77 6676654 678888888888874333322 2334555556553
No 362
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.75 E-value=7e-09 Score=108.95 Aligned_cols=104 Identities=23% Similarity=0.217 Sum_probs=80.4
Q ss_pred CCceEEEEecC-CCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCcc---EEEecCC-CcCCCCCccccCCCcc
Q 002409 413 QPSITVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLR---IIHLEDN-QLTGPLPSSLMNLPNL 487 (927)
Q Consensus 413 ~~~l~~L~L~~-n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~---~L~Ls~N-~l~g~~P~~l~~l~~L 487 (927)
.++|+.|+|++ |.|++..+..+.++++|+.|+|++|.+++ +|.+.++++|+ +|+|++| ++++..+..+.++++|
T Consensus 79 l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L 157 (239)
T 2xwt_C 79 LSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE 157 (239)
T ss_dssp CTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSS
T ss_pred CcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcc
Confidence 45788888888 88886556678888888888888888887 56677777777 8888888 8886666678888888
Q ss_pred c-cccccccccccccccccccc--cccccccCCc
Q 002409 488 R-ELYVQNNMLSGTVPSSLLSK--NVVLNYAGNI 518 (927)
Q Consensus 488 ~-~L~l~~N~l~g~iP~~l~~~--~~~l~~~~n~ 518 (927)
+ .|+|++|+++ .+|...+.. +..+.+.+|.
T Consensus 158 ~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 158 TLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred eeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 8 8888888888 788765543 4556667774
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.74 E-value=1.7e-08 Score=107.99 Aligned_cols=99 Identities=30% Similarity=0.446 Sum_probs=69.5
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|.|++ +|+ +.+|++|+.|+|++|++++ +|.+.. ++|++|+|++|++++ +| .+.++++|+.|+|
T Consensus 62 l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 62 FTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcccc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 4678888888888884 444 8888888888888888877 344444 778888888888875 33 5778888888888
Q ss_pred ccccccccccc-ccccccccccccCCc
Q 002409 493 QNNMLSGTVPS-SLLSKNVVLNYAGNI 518 (927)
Q Consensus 493 ~~N~l~g~iP~-~l~~~~~~l~~~~n~ 518 (927)
++|+|++ +|. .-++.+..+++.+|.
T Consensus 136 s~N~i~~-~~~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 136 RNNKLKS-IVMLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp TTSCCCB-CGGGGGCTTCCEEECTTSC
T ss_pred CCCcCCC-ChHHccCCCCCEEECCCCc
Confidence 8888874 341 223445566666664
No 364
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.73 E-value=8.5e-09 Score=114.45 Aligned_cols=104 Identities=20% Similarity=0.318 Sum_probs=83.8
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
..++|+.|+|++|.+++ + +.+..+++|+.|+|++|.+++. |.+..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 241 ~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 241 NLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp TCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred cCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 35678888999888885 3 4688888899999999988875 6678888899999999998888888888888999999
Q ss_pred ccccccccccccccccccccccccCCc
Q 002409 492 VQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
|++|++++..|..-++.+..+++.+|+
T Consensus 318 L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 318 LSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred ccCCccccccChhhhhccceeehhhhc
Confidence 999998876664556666777777775
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.72 E-value=1.4e-08 Score=110.18 Aligned_cols=81 Identities=30% Similarity=0.495 Sum_probs=47.4
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|++++ + +.+..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 111 l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 111 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 3456666666666653 2 3455666666666666666554 445556666666666666654333 556666666666
Q ss_pred cccccc
Q 002409 493 QNNMLS 498 (927)
Q Consensus 493 ~~N~l~ 498 (927)
++|+|+
T Consensus 186 ~~N~i~ 191 (291)
T 1h6t_A 186 SKNHIS 191 (291)
T ss_dssp CSSCCC
T ss_pred CCCcCC
Confidence 666665
No 366
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.72 E-value=9.5e-09 Score=113.56 Aligned_cols=101 Identities=25% Similarity=0.366 Sum_probs=92.2
Q ss_pred ceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 415 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
+++.|++++++++ .+|..+. ++|+.|+|++|.+++..|. +.++++|++|+|++|++++..|..+.++++|+.|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6789999999999 8898774 7999999999999998874 8999999999999999998889999999999999999
Q ss_pred ccccccccccccccccccccccCCcc
Q 002409 494 NNMLSGTVPSSLLSKNVVLNYAGNIN 519 (927)
Q Consensus 494 ~N~l~g~iP~~l~~~~~~l~~~~n~~ 519 (927)
+|+++ .+|..+...+..+.+.+|..
T Consensus 111 ~n~l~-~l~~~~~~~L~~L~l~~n~i 135 (332)
T 2ft3_A 111 KNHLV-EIPPNLPSSLVELRIHDNRI 135 (332)
T ss_dssp SSCCC-SCCSSCCTTCCEEECCSSCC
T ss_pred CCcCC-ccCccccccCCEEECCCCcc
Confidence 99999 89999888888888888853
No 367
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.72 E-value=9.2e-09 Score=114.74 Aligned_cols=105 Identities=27% Similarity=0.181 Sum_probs=69.6
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCC--CCCCCCCccEEEecCCC-cCCCCCccccCCCcccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQ-LTGPLPSSLMNLPNLRE 489 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p--~~~~l~~L~~L~Ls~N~-l~g~~P~~l~~l~~L~~ 489 (927)
.++|+.|+|++|++++..+..+.++++|++|+|++|++++..+ .+.++++|++|+|++|+ +++..|..+.++++|+.
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 4567777777777774333337777777777777777776554 36677777777777774 55445566777777777
Q ss_pred cccccccccccccccccc--ccccccccCC
Q 002409 490 LYVQNNMLSGTVPSSLLS--KNVVLNYAGN 517 (927)
Q Consensus 490 L~l~~N~l~g~iP~~l~~--~~~~l~~~~n 517 (927)
|++++|++++..|..+.. .+..+.+.+|
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 208 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMK 208 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCC
Confidence 777777777665665532 3345555555
No 368
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.72 E-value=1.3e-08 Score=110.63 Aligned_cols=81 Identities=25% Similarity=0.392 Sum_probs=54.0
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|++++. +.+.++++|+.|+|++|++++..| +..+++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 133 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l 207 (291)
T 1h6t_A 133 LPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLEL 207 (291)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEE
T ss_pred CCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 45677777777777643 456667777777777777766555 6667777777777777763 44 3666777777777
Q ss_pred cccccc
Q 002409 493 QNNMLS 498 (927)
Q Consensus 493 ~~N~l~ 498 (927)
++|+++
T Consensus 208 ~~n~i~ 213 (291)
T 1h6t_A 208 FSQECL 213 (291)
T ss_dssp EEEEEE
T ss_pred cCCccc
Confidence 777766
No 369
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.70 E-value=1.9e-08 Score=110.22 Aligned_cols=103 Identities=28% Similarity=0.420 Sum_probs=83.5
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
..++|+.|+|++|++++ +|. +..+++|+.|+|++|.+++..+ +.++++|++|+|++|++++ +|. +.++++|+.|+
T Consensus 105 ~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 179 (308)
T 1h6u_A 105 GLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLK 179 (308)
T ss_dssp TCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEE
Confidence 35689999999999985 554 8999999999999999988665 8889999999999999985 444 89999999999
Q ss_pred ccccccccccccccccccccccccCCcc
Q 002409 492 VQNNMLSGTVPSSLLSKNVVLNYAGNIN 519 (927)
Q Consensus 492 l~~N~l~g~iP~~l~~~~~~l~~~~n~~ 519 (927)
|++|++++..|-.-++.+..+.+.+|.-
T Consensus 180 l~~n~l~~~~~l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 180 ADDNKISDISPLASLPNLIEVHLKNNQI 207 (308)
T ss_dssp CCSSCCCCCGGGGGCTTCCEEECTTSCC
T ss_pred CCCCccCcChhhcCCCCCCEEEccCCcc
Confidence 9999999544433345567777777743
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.69 E-value=2.3e-08 Score=118.57 Aligned_cols=91 Identities=29% Similarity=0.417 Sum_probs=57.1
Q ss_pred ceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccccc
Q 002409 415 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 494 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~ 494 (927)
+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. +. ++|+.|+|++
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~ 189 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVST 189 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCS
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcC
Confidence 56677777777765 555 56667777777777766 443 46667777777777765 665 54 6677777777
Q ss_pred ccccccccccccccc-------ccccccCCc
Q 002409 495 NMLSGTVPSSLLSKN-------VVLNYAGNI 518 (927)
Q Consensus 495 N~l~g~iP~~l~~~~-------~~l~~~~n~ 518 (927)
|+|+ .+|. +...+ ..+.+.+|.
T Consensus 190 N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~ 218 (571)
T 3cvr_A 190 NLLE-SLPA-VPVRNHHSEETEIFFRCRENR 218 (571)
T ss_dssp SCCS-SCCC-CC--------CCEEEECCSSC
T ss_pred CCCC-chhh-HHHhhhcccccceEEecCCCc
Confidence 7777 6666 44444 555566653
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.68 E-value=1.9e-08 Score=120.37 Aligned_cols=103 Identities=27% Similarity=0.402 Sum_probs=82.0
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.+++|+.|+|++|.|++ + +.+..|++|+.|+|++|.|++. +.+..|++|+.|+|++|+|++..| +..|++|+.|+
T Consensus 107 ~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 107 DLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp TCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred cCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 46789999999999985 4 4688899999999999999886 778889999999999999987666 88899999999
Q ss_pred cccccccccccc-ccccccccccccCCccc
Q 002409 492 VQNNMLSGTVPS-SLLSKNVVLNYAGNINL 520 (927)
Q Consensus 492 l~~N~l~g~iP~-~l~~~~~~l~~~~n~~l 520 (927)
|++|+|++ +|. .-++.+..|.+.+|+..
T Consensus 182 Ls~N~i~~-l~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 182 LSKNHISD-LRALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CCSSCCCB-CGGGTTCTTCSEEECCSEEEE
T ss_pred CcCCCCCC-ChHHccCCCCCEEEccCCcCc
Confidence 99999985 442 22445667777777543
No 372
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.68 E-value=2.7e-08 Score=119.10 Aligned_cols=89 Identities=24% Similarity=0.360 Sum_probs=71.7
Q ss_pred CCCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 412 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 412 ~~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.+++|+.|+|++|.|++. +.+..|++|+.|+|++|.|++.+| +..|++|+.|+|++|+|++ +| .+..|++|+.|+
T Consensus 129 ~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~ 203 (605)
T 1m9s_A 129 HLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLE 203 (605)
T ss_dssp GCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEE
T ss_pred CCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEE
Confidence 356888899999988854 678888899999999998888777 8888889999999998885 44 588888899999
Q ss_pred ccccccccccccccc
Q 002409 492 VQNNMLSGTVPSSLL 506 (927)
Q Consensus 492 l~~N~l~g~iP~~l~ 506 (927)
|++|+|++ .|....
T Consensus 204 L~~N~l~~-~p~~~~ 217 (605)
T 1m9s_A 204 LFSQECLN-KPINHQ 217 (605)
T ss_dssp CCSEEEEC-CCCCCC
T ss_pred ccCCcCcC-Cccccc
Confidence 99998883 454443
No 373
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.67 E-value=8e-09 Score=112.85 Aligned_cols=184 Identities=21% Similarity=0.247 Sum_probs=119.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-CCCc--cceecceeecC---eEEEEEEecc
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNL--VQFLGYCQEEG---RSVLVYEFMH 678 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnI--v~l~g~~~~~~---~~~lV~E~~~ 678 (927)
+.++.|....||+.. +.+++|+-... .....+.+|+++|+.+. +..+ .+.+......+ ..++|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 457899999999863 56888885422 34567889999998883 3332 33444433332 3478999999
Q ss_pred CCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhC----------------------------------------
Q 002409 679 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG---------------------------------------- 718 (927)
Q Consensus 679 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---------------------------------------- 718 (927)
|.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 100 G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 988865331 2355666677788888888888851
Q ss_pred ---------------CCCceecCCCCCCCeEECC--CCcEEEEeecCcccccCCCCceeeeeccCCCc---cCcccccc-
Q 002409 719 ---------------CVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGY---LDPEYYIS- 777 (927)
Q Consensus 719 ---------------~~~~ivHrDLkp~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y---~aPE~~~~- 777 (927)
..+.++|+|++|.||+++. ...+.|+||+.+..... ..... ....+ ..|+....
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~-~~Dl~----~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP-DNDFI----SLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT-THHHH----TTCCTTTSCCHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh-HHHHH----HHHhhccccCHHHHHHH
Confidence 1146899999999999998 45688999998864321 11110 01111 22222111
Q ss_pred ----C---------cCCCccceeeHHHHHHHHHhCCCcccc
Q 002409 778 ----Q---------QLTDKSDVYSFGVILLELISGQEAISN 805 (927)
Q Consensus 778 ----~---------~~s~~sDVwSlGvvL~elltG~~p~~~ 805 (927)
+ ......+.|+++.++|++.+|+.++..
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 0 011225889999999999999988743
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.66 E-value=3.7e-08 Score=105.34 Aligned_cols=99 Identities=20% Similarity=0.293 Sum_probs=83.0
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++..| +.++++|++|+|++|++++ +|.. .. ++|+.|+|
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L 113 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFL 113 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEEC
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEc
Confidence 468999999999999 677 79999999999999999999877 9999999999999999996 5543 33 89999999
Q ss_pred ccccccccccc-ccccccccccccCCc
Q 002409 493 QNNMLSGTVPS-SLLSKNVVLNYAGNI 518 (927)
Q Consensus 493 ~~N~l~g~iP~-~l~~~~~~l~~~~n~ 518 (927)
++|+|++ +|. .-++.+..+++++|.
T Consensus 114 ~~N~l~~-~~~l~~l~~L~~L~Ls~N~ 139 (263)
T 1xeu_A 114 DNNELRD-TDSLIHLKNLEILSIRNNK 139 (263)
T ss_dssp CSSCCSB-SGGGTTCTTCCEEECTTSC
T ss_pred cCCccCC-ChhhcCcccccEEECCCCc
Confidence 9999995 542 224456677777774
No 375
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.64 E-value=2.9e-08 Score=104.17 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=72.2
Q ss_pred eEEEEecCC-CCCccCCchhhcCCCCc-EEeccCCcCCCCCCCCCCCCCccEEEecCCC-cCCCCCccccCC-Ccccccc
Q 002409 416 ITVIHLSSK-NLTGNIPSDLTKLSSLV-ELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL-PNLRELY 491 (927)
Q Consensus 416 l~~L~L~~n-~l~g~ip~~i~~L~~L~-~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~-l~g~~P~~l~~l-~~L~~L~ 491 (927)
|+.|+|++| ++++..+..+.++++|+ .|+|++|+++...+.....++|+.|+|++|+ +++..+..+..+ ++|+.|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 448888888 78765555678888888 8888888887443333333788888888884 775555667777 8888888
Q ss_pred ccccccccccccccccccccccccCCc
Q 002409 492 VQNNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 492 l~~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
|++|+|+ .+|...+..+..+.+.++.
T Consensus 212 l~~N~l~-~l~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 212 VSQTSVT-ALPSKGLEHLKELIARNTW 237 (239)
T ss_dssp CTTCCCC-CCCCTTCTTCSEEECTTC-
T ss_pred CCCCccc-cCChhHhccCceeeccCcc
Confidence 8888888 6777666666666655543
No 376
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.62 E-value=2.7e-08 Score=110.91 Aligned_cols=103 Identities=19% Similarity=0.228 Sum_probs=84.3
Q ss_pred CcceeecCCCC--------CCceEEEEecCCCCCccCCc-hhhcCCCCcEEeccCCcCCCCCCC--CCCCCCccE-EEec
Q 002409 402 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD--FSGCPDLRI-IHLE 469 (927)
Q Consensus 402 ~~~~v~C~~~~--------~~~l~~L~L~~n~l~g~ip~-~i~~L~~L~~L~Ls~N~l~g~~p~--~~~l~~L~~-L~Ls 469 (927)
.+..|.|+... .++++.|+|++|+|+ .||+ .|.+|++|++|+|++|++.+.+|. |.++++|+. +.++
T Consensus 10 ~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 10 SNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp ETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45668896532 257899999999999 5654 689999999999999999988875 788988765 7778
Q ss_pred CCCcCCCCCccccCCCcccccccccccccccccccc
Q 002409 470 DNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL 505 (927)
Q Consensus 470 ~N~l~g~~P~~l~~l~~L~~L~l~~N~l~g~iP~~l 505 (927)
.|++++..|..|.++++|+.|++++|+|++..+...
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhh
Confidence 899998778899999999999999999994433333
No 377
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.61 E-value=1.1e-08 Score=112.49 Aligned_cols=98 Identities=24% Similarity=0.252 Sum_probs=77.9
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
++|+.|+|++|++++..|..+.++++|+.|+|++|.+++.+| +..+++|++|+|++|++++ +| .+++|+.|+++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l~ 107 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAA 107 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEECC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCcccc-cc----CCCCcCEEECC
Confidence 478899999999997777788999999999999999988776 8888999999999998884 22 34788888888
Q ss_pred ccccccccccccccccccccccCCc
Q 002409 494 NNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 494 ~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
+|++++ +|...+..+..+.+.+|.
T Consensus 108 ~n~l~~-~~~~~~~~L~~L~l~~N~ 131 (317)
T 3o53_A 108 NNNISR-VSCSRGQGKKNIYLANNK 131 (317)
T ss_dssp SSCCSE-EEECCCSSCEEEECCSSC
T ss_pred CCccCC-cCccccCCCCEEECCCCC
Confidence 888884 444456667777777774
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.59 E-value=4.6e-08 Score=113.43 Aligned_cols=102 Identities=25% Similarity=0.299 Sum_probs=75.5
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++. ..+.++++|+.|++
T Consensus 286 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 286 LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 360 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred CCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeC
Confidence 4678888888888875433 7778888888888888887766 67788888888888888764 46778888888888
Q ss_pred cccccccccccccccccccccccCCcc
Q 002409 493 QNNMLSGTVPSSLLSKNVVLNYAGNIN 519 (927)
Q Consensus 493 ~~N~l~g~iP~~l~~~~~~l~~~~n~~ 519 (927)
++|+++|..|..-++.+..+.+.+|.-
T Consensus 361 ~~n~l~~~~~~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 361 GHNQISDLTPLANLTRITQLGLNDQAW 387 (466)
T ss_dssp CSSCCCBCGGGTTCTTCCEEECCCEEE
T ss_pred CCCccCccchhhcCCCCCEEeccCCcc
Confidence 888888777744455566666666643
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.58 E-value=9.4e-08 Score=110.65 Aligned_cols=78 Identities=22% Similarity=0.253 Sum_probs=41.5
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
++|+.|+|++|++++ +| ++.+++|+.|+|++|++++. ++..+++|++|+|++|++++ +| ++.+++|+.|+++
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCS 241 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEee
Confidence 455555555555553 33 55555555555555555553 24555555555555555554 44 4555555555555
Q ss_pred cccccc
Q 002409 494 NNMLSG 499 (927)
Q Consensus 494 ~N~l~g 499 (927)
+|+|+|
T Consensus 242 ~N~l~~ 247 (457)
T 3bz5_A 242 VNPLTE 247 (457)
T ss_dssp SSCCSC
T ss_pred CCcCCC
Confidence 555553
No 380
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.58 E-value=9.4e-10 Score=112.30 Aligned_cols=101 Identities=29% Similarity=0.320 Sum_probs=72.7
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.++|+.|+|++|.+++ +| .+.++++|+.|+|++|.|+. +|. +..+++|++|+|++|++++ +| .+.++++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 4578888888888885 67 78888888888888888874 444 4556788888888888875 55 577788888888
Q ss_pred cccccccccccc--cc--ccccccccccCCcc
Q 002409 492 VQNNMLSGTVPS--SL--LSKNVVLNYAGNIN 519 (927)
Q Consensus 492 l~~N~l~g~iP~--~l--~~~~~~l~~~~n~~ 519 (927)
|++|+++ .+|. .+ ++.+..+.+.+|+.
T Consensus 122 l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 122 MSNNKIT-NWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp ESEEECC-CHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CCCCcCC-chhHHHHHhcCCCCCEEEecCCcc
Confidence 8888887 3433 22 33455666677753
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.57 E-value=6e-08 Score=112.48 Aligned_cols=99 Identities=31% Similarity=0.422 Sum_probs=57.5
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
++|+.|+|++|.+++..| +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECc
Confidence 456666666666664333 5666666666666666665444 5556666666666666664333 5566666666666
Q ss_pred ccccccccccccccccccccccCC
Q 002409 494 NNMLSGTVPSSLLSKNVVLNYAGN 517 (927)
Q Consensus 494 ~N~l~g~iP~~l~~~~~~l~~~~n 517 (927)
+|++++..|..-++.+..+.+.+|
T Consensus 318 ~n~l~~~~~~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 318 FNNISDISPVSSLTKLQRLFFYNN 341 (466)
T ss_dssp SSCCSCCGGGGGCTTCCEEECCSS
T ss_pred CCcCCCchhhccCccCCEeECCCC
Confidence 666665555443444455555555
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.57 E-value=1e-09 Score=112.05 Aligned_cols=99 Identities=26% Similarity=0.385 Sum_probs=58.7
Q ss_pred ceEEEEecCCCCCccCCc------hhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccc
Q 002409 415 SITVIHLSSKNLTGNIPS------DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR 488 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~------~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~ 488 (927)
+++.++|+.+.+.|.+|. .+.++++|+.|+|++|.+++ +|.+.++++|++|+|++|+++ .+|..+..+++|+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 344455555555555554 66666666666666666666 445566666666666666666 5666666666666
Q ss_pred ccccccccccccccccc--ccccccccccCC
Q 002409 489 ELYVQNNMLSGTVPSSL--LSKNVVLNYAGN 517 (927)
Q Consensus 489 ~L~l~~N~l~g~iP~~l--~~~~~~l~~~~n 517 (927)
.|+|++|+|++ +| .+ ++.+..+++.+|
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N 125 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNN 125 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEE
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCC
Confidence 66666666663 44 22 223344455554
No 383
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.54 E-value=1.4e-07 Score=109.30 Aligned_cols=96 Identities=25% Similarity=0.254 Sum_probs=55.4
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|++++ +| ++++++|++|+|++|.|++. | ++++++|++|+|++|++++ +| ++++++|+.|++
T Consensus 63 l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 63 LTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp CTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred cCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 3456666666666664 33 56666666666666666653 2 5566666666666666664 33 566666666666
Q ss_pred cccccccccccccccccccccccCC
Q 002409 493 QNNMLSGTVPSSLLSKNVVLNYAGN 517 (927)
Q Consensus 493 ~~N~l~g~iP~~l~~~~~~l~~~~n 517 (927)
++|+|++ +|.+-++.+..+.+.+|
T Consensus 135 ~~N~l~~-l~l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 135 ARNTLTE-IDVSHNTQLTELDCHLN 158 (457)
T ss_dssp TTSCCSC-CCCTTCTTCCEEECTTC
T ss_pred CCCccce-eccccCCcCCEEECCCC
Confidence 6666664 44333444455555555
No 384
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.50 E-value=1.2e-07 Score=105.07 Aligned_cols=102 Identities=22% Similarity=0.323 Sum_probs=82.9
Q ss_pred CCceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.++|+.|+|++|++++ ++. +..+++|+.|+|++|.+++. +.+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 220 ~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFL 294 (347)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEEC
Confidence 4689999999999984 444 88899999999999998874 6788899999999999999863 45888999999999
Q ss_pred ccccccccccccc--ccccccccccCCcc
Q 002409 493 QNNMLSGTVPSSL--LSKNVVLNYAGNIN 519 (927)
Q Consensus 493 ~~N~l~g~iP~~l--~~~~~~l~~~~n~~ 519 (927)
++|++++..|..+ ++.+..+.+.+|.-
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCcc
Confidence 9999987776655 34567777888853
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.47 E-value=2.2e-07 Score=107.39 Aligned_cols=96 Identities=34% Similarity=0.497 Sum_probs=75.3
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
++|+.|+|++|.+++ +| .++++++|++|+|++|++++ +|.. ..+|++|+|++|++++ +| .++++++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 578899999999986 77 58899999999999999887 5543 3588999999999886 66 58889999999999
Q ss_pred ccccccccccccccccccccccCCc
Q 002409 494 NNMLSGTVPSSLLSKNVVLNYAGNI 518 (927)
Q Consensus 494 ~N~l~g~iP~~l~~~~~~l~~~~n~ 518 (927)
+|++++ +|... ..+..+.+.+|.
T Consensus 204 ~N~l~~-l~~~~-~~L~~L~l~~n~ 226 (454)
T 1jl5_A 204 NNSLKK-LPDLP-LSLESIVAGNNI 226 (454)
T ss_dssp SSCCSS-CCCCC-TTCCEEECCSSC
T ss_pred CCcCCc-CCCCc-CcccEEECcCCc
Confidence 999884 66533 455666666663
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.45 E-value=2e-08 Score=113.48 Aligned_cols=105 Identities=20% Similarity=0.301 Sum_probs=63.6
Q ss_pred CceEEEEecCCCCC--c---cCCchhhcCCCCcEEeccCCcCC----CCCCC-CCCCCCccEEEecCCCcCCC----CCc
Q 002409 414 PSITVIHLSSKNLT--G---NIPSDLTKLSSLVELWLDGNSLT----GPIPD-FSGCPDLRIIHLEDNQLTGP----LPS 479 (927)
Q Consensus 414 ~~l~~L~L~~n~l~--g---~ip~~i~~L~~L~~L~Ls~N~l~----g~~p~-~~~l~~L~~L~Ls~N~l~g~----~P~ 479 (927)
++|+.|+|++|+++ | .+|..+.++++|+.|+|++|.|+ +.+|. +..+++|++|+|++|+|++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 45666777766666 2 23335666666777777777664 44443 55666677777777766654 455
Q ss_pred cc--cCCCcccccccccccccc----cccccc---ccccccccccCCc
Q 002409 480 SL--MNLPNLRELYVQNNMLSG----TVPSSL---LSKNVVLNYAGNI 518 (927)
Q Consensus 480 ~l--~~l~~L~~L~l~~N~l~g----~iP~~l---~~~~~~l~~~~n~ 518 (927)
.+ +++++|+.|+|++|+|++ .+|..+ ++.+..+.+.+|.
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 55 336667777777777665 366655 3445556666664
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.44 E-value=1.2e-07 Score=113.85 Aligned_cols=85 Identities=32% Similarity=0.397 Sum_probs=71.8
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 493 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~ 493 (927)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~--~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM--LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc--ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 578999999999985 77 456889999999999985 444 6788999999999998 788889999999999999
Q ss_pred ccccccccccccc
Q 002409 494 NNMLSGTVPSSLL 506 (927)
Q Consensus 494 ~N~l~g~iP~~l~ 506 (927)
+|+|+|.+|..+.
T Consensus 293 ~N~l~~~~~~~l~ 305 (622)
T 3g06_A 293 GNPLSERTLQALR 305 (622)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CCCCCCcCHHHHH
Confidence 9999988887664
No 388
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.43 E-value=1.5e-07 Score=108.84 Aligned_cols=85 Identities=31% Similarity=0.482 Sum_probs=41.8
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCC--CCCccccCC-------
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG--PLPSSLMNL------- 484 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g--~~P~~l~~l------- 484 (927)
++|+.|+|++|++++ +|.. +++|+.|+|++|++++ +|. .+++|++|+|++|++++ .+|.++.+|
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~ 389 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLA 389 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCcCCCChHHHHhhhhccccc
Confidence 366677777777764 5543 4667777777777764 444 46677777777777776 666666666
Q ss_pred ------Ccccccccccccccc--cccccc
Q 002409 485 ------PNLRELYVQNNMLSG--TVPSSL 505 (927)
Q Consensus 485 ------~~L~~L~l~~N~l~g--~iP~~l 505 (927)
++|+.|++++|+++| .+|.++
T Consensus 390 ~i~~~~~~L~~L~ls~N~l~~~~~iP~sl 418 (454)
T 1jl5_A 390 EVPELPQNLKQLHVETNPLREFPDIPESV 418 (454)
T ss_dssp -----------------------------
T ss_pred ccccccCcCCEEECCCCcCCccccchhhH
Confidence 666777777777665 566554
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.43 E-value=1.9e-08 Score=113.56 Aligned_cols=105 Identities=25% Similarity=0.373 Sum_probs=83.1
Q ss_pred CceEEEEecCCCCC-ccCC---chhhcCCCCcEEeccCCcCC--C---CCC-CCCCCCCccEEEecCCCcC----CCCCc
Q 002409 414 PSITVIHLSSKNLT-GNIP---SDLTKLSSLVELWLDGNSLT--G---PIP-DFSGCPDLRIIHLEDNQLT----GPLPS 479 (927)
Q Consensus 414 ~~l~~L~L~~n~l~-g~ip---~~i~~L~~L~~L~Ls~N~l~--g---~~p-~~~~l~~L~~L~Ls~N~l~----g~~P~ 479 (927)
++|+.|+|++|.++ +.+| ..+.++++|+.|+|++|+|+ | .+| .+..+++|+.|+|++|+++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 57889999999887 5556 46778889999999999888 4 456 5778889999999999986 67888
Q ss_pred cccCCCccccccccccccccc----ccccc----ccccccccccCCc
Q 002409 480 SLMNLPNLRELYVQNNMLSGT----VPSSL----LSKNVVLNYAGNI 518 (927)
Q Consensus 480 ~l~~l~~L~~L~l~~N~l~g~----iP~~l----~~~~~~l~~~~n~ 518 (927)
.+..+++|+.|+|++|+|++. +|..+ .+.+..+++.+|.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 285 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCc
Confidence 888888999999999998865 56655 4556777777774
No 390
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.38 E-value=5.6e-08 Score=107.18 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=68.7
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCC-CCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGP-IPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~-~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
++++.|+|++|.+.+.++. +.++++|+.|+|++|.+++. +|. +.++++|++|+|++|++++..|..++++++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5677777777777765544 55677777777777777664 554 56677777777777777777777777777777777
Q ss_pred cccc-ccccc-ccccc--ccccccccccCC
Q 002409 492 VQNN-MLSGT-VPSSL--LSKNVVLNYAGN 517 (927)
Q Consensus 492 l~~N-~l~g~-iP~~l--~~~~~~l~~~~n 517 (927)
|++| .+++. +|..+ ++.+..+++.+|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 7777 56652 44433 334455566655
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.29 E-value=1.1e-06 Score=105.34 Aligned_cols=73 Identities=34% Similarity=0.524 Sum_probs=31.5
Q ss_pred eEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCccccCCCcccccccccc
Q 002409 416 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 495 (927)
Q Consensus 416 l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N 495 (927)
++.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|. .+++|++|+|++|+|+ .+|. .+++|+.|+|++|
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~--~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA--LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC--CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC--cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCC
Confidence 444444444444 4444333 444444444444442 222 3344444444444444 2333 3344444444444
Q ss_pred ccc
Q 002409 496 MLS 498 (927)
Q Consensus 496 ~l~ 498 (927)
+|+
T Consensus 112 ~l~ 114 (622)
T 3g06_A 112 PLT 114 (622)
T ss_dssp CCC
T ss_pred cCC
Confidence 444
No 392
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.27 E-value=8.2e-08 Score=105.84 Aligned_cols=112 Identities=20% Similarity=0.289 Sum_probs=95.5
Q ss_pred CcceeecCCCCCCceEEEEecCCCCCccCCchhhcC--CCCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCC-CC
Q 002409 402 PWSWLQCNSDPQPSITVIHLSSKNLTGNIPSDLTKL--SSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGP-LP 478 (927)
Q Consensus 402 ~~~~v~C~~~~~~~l~~L~L~~n~l~g~ip~~i~~L--~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~-~P 478 (927)
.|..+.|+. ..++.|+|+++.+. |..+..+ ++|+.|+|++|.+++.++.+.++++|++|+|++|++++. +|
T Consensus 38 ~W~~~~~~~---~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 38 RWYRLASDE---SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp HHHHHHTCS---TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHhcCc---hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHH
Confidence 466666642 35789999999887 5778888 999999999999999999988999999999999999876 88
Q ss_pred ccccCCCccccccccccccccccccccc--cccccccccCCcc
Q 002409 479 SSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNIN 519 (927)
Q Consensus 479 ~~l~~l~~L~~L~l~~N~l~g~iP~~l~--~~~~~l~~~~n~~ 519 (927)
..+..+++|+.|+|++|++++.+|..+. +.+..+++.+|..
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~ 154 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSG 154 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBS
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCC
Confidence 8999999999999999999988887663 4557777777743
No 393
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.27 E-value=1e-07 Score=106.77 Aligned_cols=88 Identities=23% Similarity=0.225 Sum_probs=52.1
Q ss_pred ceEEEEecCCCCCccCC----chhhcCC-CCcEEeccCCcCCCCCCC-CCCC-----CCccEEEecCCCcCCCCCccccC
Q 002409 415 SITVIHLSSKNLTGNIP----SDLTKLS-SLVELWLDGNSLTGPIPD-FSGC-----PDLRIIHLEDNQLTGPLPSSLMN 483 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip----~~i~~L~-~L~~L~Ls~N~l~g~~p~-~~~l-----~~L~~L~Ls~N~l~g~~P~~l~~ 483 (927)
+|+.|||++|.+++..+ ..+.+++ +|+.|+|++|.|++..+. +..+ ++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46666666666665444 4555666 666666666666665443 3322 66666666666666555553333
Q ss_pred ----C-Cccccccccccccccccc
Q 002409 484 ----L-PNLRELYVQNNMLSGTVP 502 (927)
Q Consensus 484 ----l-~~L~~L~l~~N~l~g~iP 502 (927)
+ ++|+.|+|++|+|++..+
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~ 126 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSS 126 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCH
T ss_pred HHHhCCCCccEEECcCCcCCcHHH
Confidence 2 566666666666664433
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.27 E-value=3.3e-07 Score=97.67 Aligned_cols=78 Identities=26% Similarity=0.363 Sum_probs=42.4
Q ss_pred CCceEEEEecCCCCCc--cCCchhhcCCCCcEEeccCCcCCCC--CCCCCCCCCccEEEecCCCcCCCCCc-------cc
Q 002409 413 QPSITVIHLSSKNLTG--NIPSDLTKLSSLVELWLDGNSLTGP--IPDFSGCPDLRIIHLEDNQLTGPLPS-------SL 481 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g--~ip~~i~~L~~L~~L~Ls~N~l~g~--~p~~~~l~~L~~L~Ls~N~l~g~~P~-------~l 481 (927)
.++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. +..+..+ +|++|+|++|.+.+.+|+ .+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHHHH
Confidence 3456666666666665 4445555666666666666666653 1123333 566666666666655552 24
Q ss_pred cCCCcccccc
Q 002409 482 MNLPNLRELY 491 (927)
Q Consensus 482 ~~l~~L~~L~ 491 (927)
..+++|+.||
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 4555555543
No 395
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.25 E-value=4.2e-06 Score=90.51 Aligned_cols=75 Identities=20% Similarity=0.209 Sum_probs=59.6
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCC---CccceecceeecCeEEEEEEeccCCc
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQEEGRSVLVYEFMHNGT 681 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hp---nIv~l~g~~~~~~~~~lV~E~~~~gs 681 (927)
+.|+.|.++.||+++..+|+.++||+...........+..|++.|+.+++. .+.+++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 568999999999999988999999997543333346789999999999875 466676653 3689999999987
Q ss_pred hh
Q 002409 682 LK 683 (927)
Q Consensus 682 L~ 683 (927)
+.
T Consensus 97 ~~ 98 (288)
T 3d1u_A 97 PT 98 (288)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 396
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.25 E-value=2.9e-06 Score=93.17 Aligned_cols=131 Identities=16% Similarity=0.244 Sum_probs=93.0
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccC--C--CccceecceeecCeEEEEEEeccCC
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH--R--NLVQFLGYCQEEGRSVLVYEFMHNG 680 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~H--p--nIv~l~g~~~~~~~~~lV~E~~~~g 680 (927)
+.++.|....||+. ++.+++|+... ......+..|.++|+.+.+ . .+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 56899999999988 67788887642 2224568899999988865 1 22334433 4568999999998
Q ss_pred chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCC----------------------------------------
Q 002409 681 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV---------------------------------------- 720 (927)
Q Consensus 681 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~---------------------------------------- 720 (927)
++.+... ..++..++..++.++++.|+.||+...
T Consensus 113 ~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 113 RITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8864321 223455556667777777777774321
Q ss_pred --------------------CceecCCCCCCCeEECCCCcEEEEeecCccc
Q 002409 721 --------------------PAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 751 (927)
Q Consensus 721 --------------------~~ivHrDLkp~NILl~~~~~vkL~DFGla~~ 751 (927)
+.++|+|++|.|||++.+..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2469999999999999866679999998753
No 397
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.10 E-value=4.4e-07 Score=101.48 Aligned_cols=101 Identities=20% Similarity=0.180 Sum_probs=85.9
Q ss_pred EEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCC----C-CCCCC-CccEEEecCCCcCCCCCccccCC-----Cc
Q 002409 418 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP----D-FSGCP-DLRIIHLEDNQLTGPLPSSLMNL-----PN 486 (927)
Q Consensus 418 ~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p----~-~~~l~-~L~~L~Ls~N~l~g~~P~~l~~l-----~~ 486 (927)
.++|+.|+++|.+|..+...++|+.|+|++|.|++..+ . +.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999888888889999999999998876 3 67788 99999999999998888888776 99
Q ss_pred cccccccccccccccccccc-------cccccccccCCc
Q 002409 487 LRELYVQNNMLSGTVPSSLL-------SKNVVLNYAGNI 518 (927)
Q Consensus 487 L~~L~l~~N~l~g~iP~~l~-------~~~~~l~~~~n~ 518 (927)
|+.|+|++|+|++..+..+. +.+..+++++|.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 120 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWND 120 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCc
Confidence 99999999999977766442 355677777775
No 398
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.08 E-value=1.5e-05 Score=86.93 Aligned_cols=134 Identities=20% Similarity=0.244 Sum_probs=88.3
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCC---Cccceeccee-ecCeEEEEEEeccCC
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQ-EEGRSVLVYEFMHNG 680 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hp---nIv~l~g~~~-~~~~~~lV~E~~~~g 680 (927)
+.++.|....||+. ++.+++|+-. .......+..|.++|+.+.+. .+.+.+.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888899987 5678888742 223456788999999999653 2445555553 345678999999998
Q ss_pred chhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhC------------------------------------------
Q 002409 681 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG------------------------------------------ 718 (927)
Q Consensus 681 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~------------------------------------------ 718 (927)
++.+.... .++...+..++.++++.|+.||+.
T Consensus 99 ~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 87653211 112223333344444444444331
Q ss_pred ---------------CCCceecCCCCCCCeEECC---CCc-EEEEeecCcc
Q 002409 719 ---------------CVPAIIHRDLKSSNILLDK---HMR-AKVSDFGLSK 750 (927)
Q Consensus 719 ---------------~~~~ivHrDLkp~NILl~~---~~~-vkL~DFGla~ 750 (927)
..+.++|+|+++.|||++. ++. +.|+||+.+.
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2236799999999999997 455 5899999775
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.06 E-value=4.6e-07 Score=96.52 Aligned_cols=67 Identities=27% Similarity=0.467 Sum_probs=57.1
Q ss_pred hcCCCCcEEeccCCcCCC--CCCC-CCCCCCccEEEecCCCcCCCCCccccCCC--cccccccccccccccccc
Q 002409 435 TKLSSLVELWLDGNSLTG--PIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLP--NLRELYVQNNMLSGTVPS 503 (927)
Q Consensus 435 ~~L~~L~~L~Ls~N~l~g--~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~--~L~~L~l~~N~l~g~iP~ 503 (927)
.+|++|+.|+|++|+|++ .+|. +..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCc
Confidence 568999999999999999 5565 56799999999999999965 4455555 899999999999988873
No 400
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.00 E-value=1.4e-05 Score=88.97 Aligned_cols=80 Identities=4% Similarity=0.057 Sum_probs=55.8
Q ss_pred ccc-cccCceEEEEEEEC-------CCcEEEEEEeecCC---chhhHhHHHHHHHHhhccC---CCccceecceeec---
Q 002409 605 KKI-GSGGFGVVYYGKLK-------DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHH---RNLVQFLGYCQEE--- 667 (927)
Q Consensus 605 ~~I-G~G~fG~Vy~~~~~-------~g~~VAVK~l~~~~---~~~~~~~~~Ei~iL~~l~H---pnIv~l~g~~~~~--- 667 (927)
+.| +.|....+|+.... +++.+++|+-.... ......+..|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999988764 26778888764322 1123568889999998853 2456677777654
Q ss_pred CeEEEEEEeccCCchhh
Q 002409 668 GRSVLVYEFMHNGTLKE 684 (927)
Q Consensus 668 ~~~~lV~E~~~~gsL~~ 684 (927)
+..++|||+++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877654
No 401
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.99 E-value=6.5e-06 Score=91.54 Aligned_cols=105 Identities=19% Similarity=0.199 Sum_probs=66.5
Q ss_pred CceEEEEecC-CCCCccCCchhhcCC-CCcEEeccCCcCCCCCCCCCCCCCccEEEecCCCcCCCCCc-cccCCCccccc
Q 002409 414 PSITVIHLSS-KNLTGNIPSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPS-SLMNLPNLREL 490 (927)
Q Consensus 414 ~~l~~L~L~~-n~l~g~ip~~i~~L~-~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~~P~-~l~~l~~L~~L 490 (927)
.++..|++.+ +++....+..+..+. .|+.|+|++|+|+...+......+|+.|+|++|+..+.+|. .|..+++|+.|
T Consensus 128 ~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~L 207 (350)
T 4ay9_X 128 LQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVIL 207 (350)
T ss_dssp SSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEE
T ss_pred chhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchh
Confidence 3566677755 445533333455554 57777888887776666655566777777775433335554 56777778888
Q ss_pred cccccccccccccccccccccccccCCcc
Q 002409 491 YVQNNMLSGTVPSSLLSKNVVLNYAGNIN 519 (927)
Q Consensus 491 ~l~~N~l~g~iP~~l~~~~~~l~~~~n~~ 519 (927)
+|++|+|+ .+|...+..+..+....+.+
T Consensus 208 dLs~N~l~-~lp~~~~~~L~~L~~l~~~~ 235 (350)
T 4ay9_X 208 DISRTRIH-SLPSYGLENLKKLRARSTYN 235 (350)
T ss_dssp ECTTSCCC-CCCSSSCTTCCEEECTTCTT
T ss_pred hcCCCCcC-ccChhhhccchHhhhccCCC
Confidence 88888877 77777666666555554443
No 402
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.98 E-value=2.7e-05 Score=82.88 Aligned_cols=134 Identities=17% Similarity=0.118 Sum_probs=92.9
Q ss_pred cccccCce-EEEEEEEC-CCcEEEEEEeecCCchhhHhHHHHHHHHhhcc-CCCccceecceeecCeEEEEEEeccCCch
Q 002409 606 KIGSGGFG-VVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 682 (927)
Q Consensus 606 ~IG~G~fG-~Vy~~~~~-~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~g~~~~~~~~~lV~E~~~~gsL 682 (927)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+-++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34555555 68987765 456789998653 23567888999998884 33356788888888999999999999877
Q ss_pred hhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCC-------------------------------------------
Q 002409 683 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------- 719 (927)
Q Consensus 683 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------------- 719 (927)
.+..... ......++.+++..|+.||+..
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6543211 0112234455555555555421
Q ss_pred ------------CCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 720 ------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 720 ------------~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
.+.++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1248999999999999987777799999765
No 403
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.90 E-value=9.8e-07 Score=101.62 Aligned_cols=105 Identities=24% Similarity=0.180 Sum_probs=77.2
Q ss_pred CCceEEEEecCCCCCcc----CCchhhcCCCCcEEeccCCcCCCCCCC------CCCCCCccEEEecCCCcCCC----CC
Q 002409 413 QPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIPD------FSGCPDLRIIHLEDNQLTGP----LP 478 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~~p~------~~~l~~L~~L~Ls~N~l~g~----~P 478 (927)
.++|+.|+|++|.+++. ++..+.++++|+.|+|++|.+++..+. ....++|++|+|++|++++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 46788888888888854 677788888899999998888754332 12346888889988888865 56
Q ss_pred ccccCCCccccccccccccccccccccc-------cccccccccCC
Q 002409 479 SSLMNLPNLRELYVQNNMLSGTVPSSLL-------SKNVVLNYAGN 517 (927)
Q Consensus 479 ~~l~~l~~L~~L~l~~N~l~g~iP~~l~-------~~~~~l~~~~n 517 (927)
..+..+++|+.|+|++|++++..+..+. +.+..+++.+|
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 6777788888999998888865554443 24556666666
No 404
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.90 E-value=3.4e-05 Score=86.25 Aligned_cols=73 Identities=10% Similarity=0.118 Sum_probs=54.8
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCC--ccceecceeec-CeEEEEEEeccCCc
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEE-GRSVLVYEFMHNGT 681 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~g~~~~~-~~~~lV~E~~~~gs 681 (927)
+.++.|....+|+.+.. ++.+++|+.... ..+..|+.+++.+.... +.+++.++... +..++|||+++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~~-g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDVG-GRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEEC-CcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 45788999999998864 788999986432 25888999999886544 34566666554 56899999999876
Q ss_pred hh
Q 002409 682 LK 683 (927)
Q Consensus 682 L~ 683 (927)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 64
No 405
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.87 E-value=8.6e-07 Score=102.11 Aligned_cols=89 Identities=31% Similarity=0.393 Sum_probs=52.1
Q ss_pred CceEEEEecCCCCCc----cCCchhhcCCCCcEEeccCCcCCCCCCC-C-CCCC----CccEEEecCCCcCC----CCCc
Q 002409 414 PSITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPIPD-F-SGCP----DLRIIHLEDNQLTG----PLPS 479 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g----~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~-~~l~----~L~~L~Ls~N~l~g----~~P~ 479 (927)
++|+.|+|++|++++ .++..+..+++|++|+|++|.++...+. + ..++ +|++|+|++|+++. .+|.
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 356666666666663 3455566666666666666666553221 1 1232 56666666666662 4566
Q ss_pred cccCCCccccccccccccccccc
Q 002409 480 SLMNLPNLRELYVQNNMLSGTVP 502 (927)
Q Consensus 480 ~l~~l~~L~~L~l~~N~l~g~iP 502 (927)
.+.++++|+.|+|++|.+++..+
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~ 130 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGL 130 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHH
T ss_pred HHccCCceeEEECCCCcCchHHH
Confidence 66666666666666666664333
No 406
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.69 E-value=0.00013 Score=80.16 Aligned_cols=140 Identities=15% Similarity=0.224 Sum_probs=79.8
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCC--Cccceec------ceeecCeEEEEEEec
Q 002409 606 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR--NLVQFLG------YCQEEGRSVLVYEFM 677 (927)
Q Consensus 606 ~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hp--nIv~l~g------~~~~~~~~~lV~E~~ 677 (927)
.|+.|..+.||+....++ .+++|+.... ...+..|..+++.+... .+.+++. +....+..+++|||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 455577889999987644 5889988642 23445566666666321 2233332 123456789999999
Q ss_pred cCCchhh--------------hcccccc----c-c-----cccCHHHH-------------------------------H
Q 002409 678 HNGTLKE--------------HLYGTLT----H-E-----QRINWIKR-------------------------------L 702 (927)
Q Consensus 678 ~~gsL~~--------------~L~~~~~----~-~-----~~l~~~~~-------------------------------~ 702 (927)
+|..+.. .+|.... . . ..-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 9865530 1111100 0 0 00122111 0
Q ss_pred HHHHHHHhHhHHHhh----------CCCCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 703 EIAEDAAKGIEYLHT----------GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 703 ~i~~qia~gL~yLH~----------~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
.+..++..++++|++ .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 012489999999999999888899999999764
No 407
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.64 E-value=0.00015 Score=81.77 Aligned_cols=74 Identities=18% Similarity=0.152 Sum_probs=48.5
Q ss_pred ccccccCceEEEEEEEC-CCcEEEEEEeecCCc-------hhhHhHHHHHHHHhhccC--CCcc-ceecceeecCeEEEE
Q 002409 605 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------QGKREFTNEVTLLSRIHH--RNLV-QFLGYCQEEGRSVLV 673 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~-~g~~VAVK~l~~~~~-------~~~~~~~~Ei~iL~~l~H--pnIv-~l~g~~~~~~~~~lV 673 (927)
+.||.|..+.||+++.. +++.++||....... .....+..|.++|+.+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999764 468899998653211 123456789999888743 3333 44433 34456899
Q ss_pred EEeccCC
Q 002409 674 YEFMHNG 680 (927)
Q Consensus 674 ~E~~~~g 680 (927)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 408
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.63 E-value=5.3e-05 Score=83.26 Aligned_cols=92 Identities=22% Similarity=0.289 Sum_probs=76.8
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCcc-EEEecCCCcCCCCCccccCCCcccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR-IIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~-~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
++|+.|+|++|+++..-+..|.++++|+.|+|++| ++...+. |.+|++|+ .|+|++ +++..-+..|.+|++|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 57999999999999444457889999999999998 6654444 89999999 999999 77755567899999999999
Q ss_pred ccccccccccccccccc
Q 002409 492 VQNNMLSGTVPSSLLSK 508 (927)
Q Consensus 492 l~~N~l~g~iP~~l~~~ 508 (927)
|++|+++ .|+...+..
T Consensus 304 l~~n~i~-~I~~~aF~~ 319 (329)
T 3sb4_A 304 ATGDKIT-TLGDELFGN 319 (329)
T ss_dssp ECSSCCC-EECTTTTCT
T ss_pred eCCCccC-ccchhhhcC
Confidence 9999999 787766543
No 409
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.61 E-value=0.00024 Score=76.38 Aligned_cols=74 Identities=20% Similarity=0.244 Sum_probs=54.2
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCC-C--ccceecceeecCeEEEEEEeccCCc
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR-N--LVQFLGYCQEEGRSVLVYEFMHNGT 681 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hp-n--Iv~l~g~~~~~~~~~lV~E~~~~gs 681 (927)
+.+|.|..+.||+.+..||+.+++|+-..........|..|++.|+.+... . +.+.+++ + ..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeecccC
Confidence 468999999999999999999999987655444456688999999988432 2 2333433 2 2478999988764
Q ss_pred h
Q 002409 682 L 682 (927)
Q Consensus 682 L 682 (927)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 410
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.57 E-value=4.8e-06 Score=93.50 Aligned_cols=84 Identities=24% Similarity=0.207 Sum_probs=38.4
Q ss_pred ceEEEEecCCCCCc----cCCchhhcCCCCcEEeccCCcCCCCC----CC-CCCCCCccEEEecCCCcCC----CCCccc
Q 002409 415 SITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPI----PD-FSGCPDLRIIHLEDNQLTG----PLPSSL 481 (927)
Q Consensus 415 ~l~~L~L~~n~l~g----~ip~~i~~L~~L~~L~Ls~N~l~g~~----p~-~~~l~~L~~L~Ls~N~l~g----~~P~~l 481 (927)
.|+.|+|++|.|+. .++..+..+++|++|+|++|.|+..- +. +..+++|+.|+|++|+|+. .++..+
T Consensus 156 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L 235 (372)
T 3un9_A 156 QITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAA 235 (372)
T ss_dssp CCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHH
T ss_pred ccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHH
Confidence 45555555555542 13333344555555555555554311 11 3334455555555555542 122333
Q ss_pred cCCCccccccccccccc
Q 002409 482 MNLPNLRELYVQNNMLS 498 (927)
Q Consensus 482 ~~l~~L~~L~l~~N~l~ 498 (927)
...++|+.|+|++|.|+
T Consensus 236 ~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 236 REHPSLELLHLYFNELS 252 (372)
T ss_dssp HHCSSCCEEECTTSSCC
T ss_pred HhCCCCCEEeccCCCCC
Confidence 33445555555555554
No 411
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.55 E-value=6.1e-06 Score=92.70 Aligned_cols=84 Identities=23% Similarity=0.248 Sum_probs=45.8
Q ss_pred ceEEEEecCCCCCccCCchhh-----cCCCCcEEeccCCcCCCC----CCC-CCCCCCccEEEecCCCcCC----CCCcc
Q 002409 415 SITVIHLSSKNLTGNIPSDLT-----KLSSLVELWLDGNSLTGP----IPD-FSGCPDLRIIHLEDNQLTG----PLPSS 480 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~-----~L~~L~~L~Ls~N~l~g~----~p~-~~~l~~L~~L~Ls~N~l~g----~~P~~ 480 (927)
+|+.|+|++|+|+..-...+. ..++|+.|+|++|.|+.. ++. +..+++|++|+|++|+|+. .++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 466666666666533222222 245566666666666431 111 3445666666666666653 22344
Q ss_pred ccCCCccccccccccccc
Q 002409 481 LMNLPNLRELYVQNNMLS 498 (927)
Q Consensus 481 l~~l~~L~~L~l~~N~l~ 498 (927)
+..+++|+.|+|++|+|+
T Consensus 207 L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp GGGCSCCCEEECCSSCCC
T ss_pred HhcCCCcCeEECCCCCCC
Confidence 555566666666666665
No 412
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.44 E-value=0.00052 Score=74.82 Aligned_cols=74 Identities=19% Similarity=0.242 Sum_probs=58.7
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhcc---CCCccceecceeecCeEEEEEEeccCCc
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSVLVYEFMHNGT 681 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~---HpnIv~l~g~~~~~~~~~lV~E~~~~gs 681 (927)
+.|+.|....+|+.... ++.+++|+.... ....+..|.+.|+.+. ...+.+++.++...+..++|||++++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 35788999999998864 778899987532 3566889999998884 2557788888887788999999999876
Q ss_pred h
Q 002409 682 L 682 (927)
Q Consensus 682 L 682 (927)
+
T Consensus 118 ~ 118 (312)
T 3jr1_A 118 N 118 (312)
T ss_dssp C
T ss_pred C
Confidence 5
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.34 E-value=1.8e-05 Score=79.64 Aligned_cols=86 Identities=20% Similarity=0.327 Sum_probs=55.8
Q ss_pred CceEEEEecCC-CCCcc----CCchhhcCCCCcEEeccCCcCCCC----CCC-CCCCCCccEEEecCCCcCCC----CCc
Q 002409 414 PSITVIHLSSK-NLTGN----IPSDLTKLSSLVELWLDGNSLTGP----IPD-FSGCPDLRIIHLEDNQLTGP----LPS 479 (927)
Q Consensus 414 ~~l~~L~L~~n-~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~----~p~-~~~l~~L~~L~Ls~N~l~g~----~P~ 479 (927)
+.|+.|+|++| .+... +...+...++|++|+|++|.|... +.. +...+.|++|+|++|+|... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46777777777 76532 344555567777888888777542 111 34456777788888777642 455
Q ss_pred cccCCCccccccc--ccccccc
Q 002409 480 SLMNLPNLRELYV--QNNMLSG 499 (927)
Q Consensus 480 ~l~~l~~L~~L~l--~~N~l~g 499 (927)
.+...++|+.|+| ++|.|+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHhCCCceEEEecCCCCCCCH
Confidence 6666677777887 6777763
No 414
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.30 E-value=2.7e-05 Score=92.61 Aligned_cols=105 Identities=18% Similarity=0.089 Sum_probs=56.4
Q ss_pred CceEEEEec----CCCCCcc-----CCchhhcCCCCcEEeccCC--cCCCCCCC-C-CCCCCccEEEecCCCcCC-CCCc
Q 002409 414 PSITVIHLS----SKNLTGN-----IPSDLTKLSSLVELWLDGN--SLTGPIPD-F-SGCPDLRIIHLEDNQLTG-PLPS 479 (927)
Q Consensus 414 ~~l~~L~L~----~n~l~g~-----ip~~i~~L~~L~~L~Ls~N--~l~g~~p~-~-~~l~~L~~L~Ls~N~l~g-~~P~ 479 (927)
++|+.|+|+ .|.+++. ++..+.++++|+.|+|+.| .+++..+. + ..+++|++|+|++|++++ .++.
T Consensus 403 ~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 482 (592)
T 3ogk_B 403 KNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME 482 (592)
T ss_dssp CSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH
T ss_pred CCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH
Confidence 456666664 5555542 3333555666666666532 24443322 2 235666666666666664 2344
Q ss_pred cccCCCcccccccccccccccccccc---ccccccccccCCc
Q 002409 480 SLMNLPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGNI 518 (927)
Q Consensus 480 ~l~~l~~L~~L~l~~N~l~g~iP~~l---~~~~~~l~~~~n~ 518 (927)
.+..+++|+.|+|++|+|++.....+ ++.+..+.+++|.
T Consensus 483 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 483 FSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 44566666666666666654433222 3344555555554
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.12 E-value=3.7e-05 Score=77.27 Aligned_cols=86 Identities=10% Similarity=0.144 Sum_probs=68.7
Q ss_pred CCceEEEEecCCCCCcc----CCchhhcCCCCcEEeccCCcCCCC----C-CCCCCCCCccEEEe--cCCCcCCC----C
Q 002409 413 QPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGP----I-PDFSGCPDLRIIHL--EDNQLTGP----L 477 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~----~-p~~~~l~~L~~L~L--s~N~l~g~----~ 477 (927)
.+.|+.|+|++|.|... +...+...+.|++|+|++|.|+.. + ..+...+.|++|+| ++|.|... +
T Consensus 64 ~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l 143 (185)
T 1io0_A 64 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 143 (185)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHH
Confidence 35799999999999742 455566778999999999999863 2 23677889999999 88999843 4
Q ss_pred CccccCCCccccccccccccc
Q 002409 478 PSSLMNLPNLRELYVQNNMLS 498 (927)
Q Consensus 478 P~~l~~l~~L~~L~l~~N~l~ 498 (927)
...+...++|+.|+|++|.+.
T Consensus 144 ~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 144 ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeccCCCCC
Confidence 455666789999999999986
No 416
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.99 E-value=0.0019 Score=73.47 Aligned_cols=78 Identities=15% Similarity=0.202 Sum_probs=45.6
Q ss_pred CceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCceeeee-ccCCCccCccccccCc---CCCccceeeHHHHHHHH
Q 002409 721 PAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIV-RGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLEL 796 (927)
Q Consensus 721 ~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~---~s~~sDVwSlGvvL~el 796 (927)
..++|||+++.|||++.++ ++|+||+.+....... ...... .-...|++|+...... -....++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4899999999999998876 9999999886432110 110000 0012455555443111 11123455777777777
Q ss_pred HhCC
Q 002409 797 ISGQ 800 (927)
Q Consensus 797 ltG~ 800 (927)
+.+.
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 417
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.93 E-value=0.0025 Score=69.26 Aligned_cols=143 Identities=16% Similarity=0.201 Sum_probs=79.7
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCc--cceecc------eeecCeEEEEEEe
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL--VQFLGY------CQEEGRSVLVYEF 676 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnI--v~l~g~------~~~~~~~~lV~E~ 676 (927)
+.|+.|....+|+....++ .+++|+.... .....+..|+.+++.+....+ .+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3466788889999987755 6788987642 123456678888877743232 233321 1224567899999
Q ss_pred ccCCchhhh--------------ccccc---ccc-----cccCHHHHHH------------HHHHHHhHhHHHhhC----
Q 002409 677 MHNGTLKEH--------------LYGTL---THE-----QRINWIKRLE------------IAEDAAKGIEYLHTG---- 718 (927)
Q Consensus 677 ~~~gsL~~~--------------L~~~~---~~~-----~~l~~~~~~~------------i~~qia~gL~yLH~~---- 718 (927)
++|..+... ++... ... ....|..... +...+...++++++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 988654220 11100 000 0011222110 011133445555432
Q ss_pred CCCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 719 CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 719 ~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
....++|+|+++.|||++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12479999999999999987666899998764
No 418
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.82 E-value=0.00015 Score=71.80 Aligned_cols=85 Identities=12% Similarity=0.086 Sum_probs=65.5
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCc-CCC-CCCCCCCC----CCccEEEecCCC-cCCCCCccccCCCc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNS-LTG-PIPDFSGC----PDLRIIHLEDNQ-LTGPLPSSLMNLPN 486 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~-l~g-~~p~~~~l----~~L~~L~Ls~N~-l~g~~P~~l~~l~~ 486 (927)
.+|+.|||+++.++..--..+.++++|+.|+|++|. ++. .+..++.+ ++|++|+|+++. +|..=-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999875444567889999999999995 654 23334443 479999999984 77433346788999
Q ss_pred cccccccccc-cc
Q 002409 487 LRELYVQNNM-LS 498 (927)
Q Consensus 487 L~~L~l~~N~-l~ 498 (927)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999986 55
No 419
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.80 E-value=0.00018 Score=85.46 Aligned_cols=83 Identities=13% Similarity=0.185 Sum_probs=49.9
Q ss_pred CceEEEEecCCCCCccCCchhh-cCCCCcEEeccCC-cCCCC-CCCC-CCCCCccEEEecCCCcCCCCCcccc----CCC
Q 002409 414 PSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGN-SLTGP-IPDF-SGCPDLRIIHLEDNQLTGPLPSSLM----NLP 485 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~-~L~~L~~L~Ls~N-~l~g~-~p~~-~~l~~L~~L~Ls~N~l~g~~P~~l~----~l~ 485 (927)
++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++.+ .++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4566777777766665555555 5667777777766 44331 3333 3566777777777766654444333 445
Q ss_pred ccccccccccc
Q 002409 486 NLRELYVQNNM 496 (927)
Q Consensus 486 ~L~~L~l~~N~ 496 (927)
+|+.|+|++|.
T Consensus 185 ~L~~L~l~~~~ 195 (594)
T 2p1m_B 185 SLVSLNISCLA 195 (594)
T ss_dssp CCCEEECTTCC
T ss_pred cCcEEEecccC
Confidence 67777776665
No 420
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.78 E-value=0.0048 Score=67.23 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=80.6
Q ss_pred cccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCC--ccceecc-----eeecCeEEEEEEecc
Q 002409 606 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY-----CQEEGRSVLVYEFMH 678 (927)
Q Consensus 606 ~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~g~-----~~~~~~~~lV~E~~~ 678 (927)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.+++.. ....+..+++||+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789999877777789999986332 23456777888888875322 3334432 122456688999998
Q ss_pred CCchhh----h----------cccccc-----cccccCHHHH----------------------HHHHHHHHhHhHHHhh
Q 002409 679 NGTLKE----H----------LYGTLT-----HEQRINWIKR----------------------LEIAEDAAKGIEYLHT 717 (927)
Q Consensus 679 ~gsL~~----~----------L~~~~~-----~~~~l~~~~~----------------------~~i~~qia~gL~yLH~ 717 (927)
|..+.. . ++.... ....+++... ...+.+++..+.-+..
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 865431 0 111000 0111221110 0111122222221111
Q ss_pred -CCCCceecCCCCCCCeEECCCCcEEEEeecCcc
Q 002409 718 -GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 750 (927)
Q Consensus 718 -~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~ 750 (927)
.....++|+|+++.|||++ + .+.|+||+.+.
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1224789999999999999 4 89999998765
No 421
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.76 E-value=0.00049 Score=81.57 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=29.1
Q ss_pred CceEEEEecCCCCC----ccCCchhhcCCCCcEEeccCCcCCCCCCCCCCCCCccEEEec
Q 002409 414 PSITVIHLSSKNLT----GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLE 469 (927)
Q Consensus 414 ~~l~~L~L~~n~l~----g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls 469 (927)
++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+.+....+.++++|+.|+++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGG 251 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEEC
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhccc
Confidence 45666666666655 233444455566666666666555422223444444444444
No 422
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.73 E-value=0.0032 Score=68.93 Aligned_cols=141 Identities=13% Similarity=0.110 Sum_probs=71.8
Q ss_pred cccccCceE-EEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCC--ccceecceeecCeEEEEEEeccCCch
Q 002409 606 KIGSGGFGV-VYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEEGRSVLVYEFMHNGTL 682 (927)
Q Consensus 606 ~IG~G~fG~-Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~g~~~~~~~~~lV~E~~~~gsL 682 (927)
.|+.|+... +|+....+++.+++|...... ...+..|+.+++.+.... +.+++.+..+.+ +++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 455554444 667765446777777643221 134566788877774323 345565543333 789999876665
Q ss_pred hhhccccc---------------------cc-ccccCHHHHH--------------------HHHHHHHhHhHHHh---h
Q 002409 683 KEHLYGTL---------------------TH-EQRINWIKRL--------------------EIAEDAAKGIEYLH---T 717 (927)
Q Consensus 683 ~~~L~~~~---------------------~~-~~~l~~~~~~--------------------~i~~qia~gL~yLH---~ 717 (927)
.+.+.... .. ...++..... .....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 44331100 00 0011110000 00011111222221 1
Q ss_pred CCCCceecCCCCCCCeEECCC----CcEEEEeecCccc
Q 002409 718 GCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKF 751 (927)
Q Consensus 718 ~~~~~ivHrDLkp~NILl~~~----~~vkL~DFGla~~ 751 (927)
.....++|||+.+.|||++.+ +.+.|+||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 112489999999999999875 6899999998763
No 423
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.72 E-value=0.00012 Score=86.99 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCceEEEEec--C----CCCCc-----cCCchhhcCCCCcEEeccCCcCCCCCC-CCCC-CCCccEEEecCCCcCCCCCc
Q 002409 413 QPSITVIHLS--S----KNLTG-----NIPSDLTKLSSLVELWLDGNSLTGPIP-DFSG-CPDLRIIHLEDNQLTGPLPS 479 (927)
Q Consensus 413 ~~~l~~L~L~--~----n~l~g-----~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~-l~~L~~L~Ls~N~l~g~~P~ 479 (927)
.++|+.|+|+ + +++++ .++..+.++++|+.|+|++ .+++..+ .+.. +++|++|+|++|++++..+.
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~ 474 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMH 474 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHH
T ss_pred CCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHH
Confidence 3567777777 3 44542 1122256677777777766 4544322 2433 67777777777777655444
Q ss_pred cc-cCCCccccccccccccccccccccc---cccccccccCCc
Q 002409 480 SL-MNLPNLRELYVQNNMLSGTVPSSLL---SKNVVLNYAGNI 518 (927)
Q Consensus 480 ~l-~~l~~L~~L~l~~N~l~g~iP~~l~---~~~~~l~~~~n~ 518 (927)
.+ ..+++|+.|+|++|.+++..+..+. +.+..+.+.+|+
T Consensus 475 ~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 475 HVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 44 5577777777777777644443332 344556666664
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.71 E-value=0.0041 Score=67.12 Aligned_cols=70 Identities=11% Similarity=0.131 Sum_probs=44.5
Q ss_pred ccccccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCcc-ceecceeecCeEEEEEEec-cCCch
Q 002409 605 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLV-QFLGYCQEEGRSVLVYEFM-HNGTL 682 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv-~l~g~~~~~~~~~lV~E~~-~~gsL 682 (927)
+.|+.|....+|+. +.+++|+-..... .......|+.+++.+....+. ++++++ .+..++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 56888999999998 5688888754321 122345788888887544443 445443 33346899999 65544
No 425
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.58 E-value=0.0057 Score=69.70 Aligned_cols=72 Identities=14% Similarity=0.316 Sum_probs=49.2
Q ss_pred ccccccCceEEEEEEECC--------CcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCc-cceecceeecCeEEEEEE
Q 002409 605 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~--------g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~g~~~~~~~~~lV~E 675 (927)
+.|+.|-...+|+....+ ++.+++|+.... .....+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 457788889999998763 578999987432 111455679999988854444 456655432 28999
Q ss_pred eccCCch
Q 002409 676 FMHNGTL 682 (927)
Q Consensus 676 ~~~~gsL 682 (927)
|++|.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986554
No 426
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.41 E-value=0.0006 Score=76.00 Aligned_cols=105 Identities=18% Similarity=0.313 Sum_probs=61.2
Q ss_pred CCceEEEEecCCCCCccCCchhh--cCCCCcEEeccC--CcCCCC--C----CCC--CCCCCccEEEecCCCcCCCCCcc
Q 002409 413 QPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDG--NSLTGP--I----PDF--SGCPDLRIIHLEDNQLTGPLPSS 480 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~ip~~i~--~L~~L~~L~Ls~--N~l~g~--~----p~~--~~l~~L~~L~Ls~N~l~g~~P~~ 480 (927)
.++|+.|+|..+++.......+. .|++|+.|+|+. |...|. + +.+ ..+++|++|+|++|.+.+..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 35677777777766543333444 677888888753 222221 1 122 24778888888888876544333
Q ss_pred cc---CCCccccccccccccccc----ccccc--ccccccccccCC
Q 002409 481 LM---NLPNLRELYVQNNMLSGT----VPSSL--LSKNVVLNYAGN 517 (927)
Q Consensus 481 l~---~l~~L~~L~l~~N~l~g~----iP~~l--~~~~~~l~~~~n 517 (927)
+. .+++|+.|+|+.|.|++. ++..+ ++.+..+++..|
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 32 467788888888888753 23222 233455555555
No 427
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=96.32 E-value=0.0038 Score=68.25 Aligned_cols=77 Identities=21% Similarity=0.182 Sum_probs=65.2
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCc-EEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCcccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLV-ELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 491 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~-~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~ 491 (927)
.+|+.|+|.+| ++..-+..|.++++|+ .|+|++ +++...+. |.+|++|+.|+|++|+++..-+..|.++++|+.|+
T Consensus 250 ~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 250 KYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 57999999998 7744455789999999 999999 77765554 99999999999999999966666899999999886
Q ss_pred c
Q 002409 492 V 492 (927)
Q Consensus 492 l 492 (927)
.
T Consensus 328 ~ 328 (329)
T 3sb4_A 328 K 328 (329)
T ss_dssp C
T ss_pred c
Confidence 4
No 428
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.29 E-value=0.012 Score=65.85 Aligned_cols=141 Identities=18% Similarity=0.249 Sum_probs=79.9
Q ss_pred ccccccCceEEEEEEEC--------CCcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCc-cceecceeecCeEEEEEE
Q 002409 605 KKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~--------~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~g~~~~~~~~~lV~E 675 (927)
+.|..|-...+|+.... +++.+++|+.... ......+.+|.++++.+...++ .++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 34666777889998875 2478999985321 2234566789999988853333 455655543 28999
Q ss_pred eccCCchhhh-c----------------ccccc-cccccC--HHHHHHHHHHHHh-------------------HhHHHh
Q 002409 676 FMHNGTLKEH-L----------------YGTLT-HEQRIN--WIKRLEIAEDAAK-------------------GIEYLH 716 (927)
Q Consensus 676 ~~~~gsL~~~-L----------------~~~~~-~~~~l~--~~~~~~i~~qia~-------------------gL~yLH 716 (927)
|++|..|..- + |.... ...... |.+..++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998665421 1 11100 011111 2333333333221 122222
Q ss_pred ----hC-CCCceecCCCCCCCeEECCC----CcEEEEeecCcc
Q 002409 717 ----TG-CVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSK 750 (927)
Q Consensus 717 ----~~-~~~~ivHrDLkp~NILl~~~----~~vkL~DFGla~ 750 (927)
.. ....++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 21 12479999999999999876 789999998775
No 429
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.12 E-value=0.026 Score=64.69 Aligned_cols=74 Identities=12% Similarity=0.133 Sum_probs=48.1
Q ss_pred ccccccCceEEEEEEECC-CcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCcc-ceecceeecCeEEEEEEeccCCch
Q 002409 605 KKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLV-QFLGYCQEEGRSVLVYEFMHNGTL 682 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~-g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv-~l~g~~~~~~~~~lV~E~~~~gsL 682 (927)
+.|+.|-...+|+....+ ++.+++|+..... ........|..+++.+...++. ++++.+. + .+||||+++.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 467888889999998875 4788899864322 1112236889999988655553 5666552 2 259999987655
Q ss_pred h
Q 002409 683 K 683 (927)
Q Consensus 683 ~ 683 (927)
.
T Consensus 189 ~ 189 (458)
T 2qg7_A 189 S 189 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.12 E-value=0.0062 Score=57.20 Aligned_cols=37 Identities=32% Similarity=0.328 Sum_probs=18.6
Q ss_pred CccEEEecCCCcCCCCCccccCCCccccccccccccc
Q 002409 462 DLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 498 (927)
Q Consensus 462 ~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l~~N~l~ 498 (927)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3455555555555332334455555555555555543
No 431
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.10 E-value=0.00065 Score=75.68 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=60.7
Q ss_pred CCceEEEEecC--CCCCcc-----CCchh--hcCCCCcEEeccCCcCCCCCCC----CCCCCCccEEEecCCCcCCC---
Q 002409 413 QPSITVIHLSS--KNLTGN-----IPSDL--TKLSSLVELWLDGNSLTGPIPD----FSGCPDLRIIHLEDNQLTGP--- 476 (927)
Q Consensus 413 ~~~l~~L~L~~--n~l~g~-----ip~~i--~~L~~L~~L~Ls~N~l~g~~p~----~~~l~~L~~L~Ls~N~l~g~--- 476 (927)
.++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+....+. ...+++|++|+|+.|+|++.
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~ 297 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR 297 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH
Confidence 56788888853 222111 11222 3478999999999998754332 23578999999999998863
Q ss_pred -CCccccCCCccccccccccccc
Q 002409 477 -LPSSLMNLPNLRELYVQNNMLS 498 (927)
Q Consensus 477 -~P~~l~~l~~L~~L~l~~N~l~ 498 (927)
++..+.++++|+.|+|++|.|+
T Consensus 298 ~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 298 LLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHhhcccCCcceEEECCCCcCC
Confidence 4555667899999999999988
No 432
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.03 E-value=0.014 Score=64.87 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=44.5
Q ss_pred ccccccCceEEEEEEECC---------CcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCcc-ceecceeecCeEEEEE
Q 002409 605 KKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLV-QFLGYCQEEGRSVLVY 674 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~---------g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnIv-~l~g~~~~~~~~~lV~ 674 (927)
+.|+.|....+|+....+ ++.+++|+..... ........|.++++.+...+++ ++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457778888999998764 2688888865332 1122346788888888544443 555433 2 26899
Q ss_pred EeccCCch
Q 002409 675 EFMHNGTL 682 (927)
Q Consensus 675 E~~~~gsL 682 (927)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987554
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.90 E-value=0.0081 Score=56.35 Aligned_cols=55 Identities=31% Similarity=0.514 Sum_probs=45.9
Q ss_pred EEEecCCCCC-ccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcC
Q 002409 418 VIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLT 474 (927)
Q Consensus 418 ~L~L~~n~l~-g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~ 474 (927)
.++.++++|+ ..+|..|. .+|+.|+|++|+|+...+. |..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 7888899987 46775432 4799999999999987776 688999999999999875
No 434
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.61 E-value=0.075 Score=58.29 Aligned_cols=68 Identities=12% Similarity=0.201 Sum_probs=43.8
Q ss_pred cccCceEEEEEEECCCcEEEEEEeecCCchhhHhHHHHHHHHhhccC---CCccceecc------eeecCeEEEEEEecc
Q 002409 608 GSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH---RNLVQFLGY------CQEEGRSVLVYEFMH 678 (927)
Q Consensus 608 G~G~fG~Vy~~~~~~g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~H---pnIv~l~g~------~~~~~~~~lV~E~~~ 678 (927)
|.|....||+....+| .+++|+...... ..|+.+++.+.. |.+.+.+.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3333679999987766 899998765432 356666666532 224444432 233567799999999
Q ss_pred CCch
Q 002409 679 NGTL 682 (927)
Q Consensus 679 ~gsL 682 (927)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8766
No 435
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.87 E-value=0.04 Score=62.05 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=24.8
Q ss_pred hhhcCCCCcEEeccCCcCCC----CCCC--CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 433 DLTKLSSLVELWLDGNSLTG----PIPD--FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 433 ~i~~L~~L~~L~Ls~N~l~g----~~p~--~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.|.++++|+.|+|.+|.+.. .|+. |.+|++|+.|+|. |+++-.-...|.++++|+.|.|
T Consensus 266 aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~l 330 (401)
T 4fdw_A 266 AFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTI 330 (401)
T ss_dssp TTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEE
T ss_pred HhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEE
Confidence 44444455555554444431 1221 4444445554444 2233222223444444444444
No 436
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.44 E-value=0.14 Score=57.36 Aligned_cols=141 Identities=16% Similarity=0.250 Sum_probs=78.4
Q ss_pred cccccCceEEEEEEECC--------CcEEEEEEeecCCch------------------hhHhHHHHHHHHhhccCCCc-c
Q 002409 606 KIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQ------------------GKREFTNEVTLLSRIHHRNL-V 658 (927)
Q Consensus 606 ~IG~G~fG~Vy~~~~~~--------g~~VAVK~l~~~~~~------------------~~~~~~~Ei~iL~~l~HpnI-v 658 (927)
.|..|-...+|+....+ .+.|.+++.-..... .......|..+++.+...++ .
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 35456677999988763 367888876432111 01123358888888854444 4
Q ss_pred ceecceeecCeEEEEEEeccCCchhhh-c----------------ccc-cccccccC--HHHHHHHHHHHH---------
Q 002409 659 QFLGYCQEEGRSVLVYEFMHNGTLKEH-L----------------YGT-LTHEQRIN--WIKRLEIAEDAA--------- 709 (927)
Q Consensus 659 ~l~g~~~~~~~~~lV~E~~~~gsL~~~-L----------------~~~-~~~~~~l~--~~~~~~i~~qia--------- 709 (927)
++++++... +|+||+++-+|... + |.. ........ +....++..++.
T Consensus 139 kl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 566665422 89999997555321 1 111 00011112 122222222221
Q ss_pred -------------hHh----HHHhhC-CCCceecCCCCCCCeEECCC------CcEEEEeecCcc
Q 002409 710 -------------KGI----EYLHTG-CVPAIIHRDLKSSNILLDKH------MRAKVSDFGLSK 750 (927)
Q Consensus 710 -------------~gL----~yLH~~-~~~~ivHrDLkp~NILl~~~------~~vkL~DFGla~ 750 (927)
.-+ .+|... ....++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223221 12478999999999999887 789999998764
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.15 E-value=0.05 Score=61.25 Aligned_cols=89 Identities=15% Similarity=0.120 Sum_probs=65.1
Q ss_pred CCceEEEEecCCCCC-----ccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCc
Q 002409 413 QPSITVIHLSSKNLT-----GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPN 486 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~-----g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~ 486 (927)
.++|+.|+|.+|.+. -.-+..|..+++|+.|+|.+ +++..-.. |.+|++|+.|+|..| ++..-+..|.++ +
T Consensus 270 c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~ 346 (401)
T 4fdw_A 270 CPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-G 346 (401)
T ss_dssp CTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-C
T ss_pred CCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-C
Confidence 357889999887765 23345688899999999984 46554443 888999999999655 664445678888 9
Q ss_pred ccccccccccccccccccc
Q 002409 487 LRELYVQNNMLSGTVPSSL 505 (927)
Q Consensus 487 L~~L~l~~N~l~g~iP~~l 505 (927)
|+.|++++|.+. .++...
T Consensus 347 L~~l~l~~n~~~-~l~~~~ 364 (401)
T 4fdw_A 347 IKEVKVEGTTPP-QVFEKV 364 (401)
T ss_dssp CCEEEECCSSCC-BCCCSS
T ss_pred CCEEEEcCCCCc-cccccc
Confidence 999999999877 454443
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=93.96 E-value=0.19 Score=51.08 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=65.3
Q ss_pred CchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCCeEECCCCcEEEEeecCcccccCCCCce
Q 002409 680 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 759 (927)
Q Consensus 680 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 759 (927)
-+|.+.|.. .+..+++.++|.++.|.+.+|.-+-.+.. . ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 478888753 36789999999999999999877622110 1 1233456899999999888753 1110
Q ss_pred eeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCc
Q 002409 760 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEA 802 (927)
Q Consensus 760 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p 802 (927)
.....+.+||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123466888763 3456778899999999998864443
No 439
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.95 E-value=0.14 Score=58.05 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=47.8
Q ss_pred ccccccCceEEEEEEECC--------CcEEEEEEeecCCchhhHhHHHHHHHHhhccCCCc-cceecceeecCeEEEEEE
Q 002409 605 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 675 (927)
Q Consensus 605 ~~IG~G~fG~Vy~~~~~~--------g~~VAVK~l~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~g~~~~~~~~~lV~E 675 (927)
+.+..|-...+|+....+ ++.+++|+..... .......+|.++++.+...++ .++++.+ . -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 456667778999998763 5788998854322 222345678888888854344 3445432 2 268999
Q ss_pred eccCCch
Q 002409 676 FMHNGTL 682 (927)
Q Consensus 676 ~~~~gsL 682 (927)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998664
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=92.75 E-value=0.022 Score=56.18 Aligned_cols=82 Identities=10% Similarity=0.035 Sum_probs=55.5
Q ss_pred CCCcEEeccCCcCCCC-CCCCCCCCCccEEEecCCC-cCCCCCccccCC----Cccccccccccc-ccccccccc--ccc
Q 002409 438 SSLVELWLDGNSLTGP-IPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL----PNLRELYVQNNM-LSGTVPSSL--LSK 508 (927)
Q Consensus 438 ~~L~~L~Ls~N~l~g~-~p~~~~l~~L~~L~Ls~N~-l~g~~P~~l~~l----~~L~~L~l~~N~-l~g~iP~~l--~~~ 508 (927)
-.|+.|||+++.++.. +..+.+|++|+.|+|+++. ++..--..+..+ ++|+.|+|++|. +|..==..+ ++.
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 4799999999998763 4457899999999999995 764333445654 379999999985 772110111 234
Q ss_pred cccccccCCcc
Q 002409 509 NVVLNYAGNIN 519 (927)
Q Consensus 509 ~~~l~~~~n~~ 519 (927)
+..|.+.+.+.
T Consensus 141 L~~L~L~~c~~ 151 (176)
T 3e4g_A 141 LKYLFLSDLPG 151 (176)
T ss_dssp CCEEEEESCTT
T ss_pred CCEEECCCCCC
Confidence 45555555443
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=92.74 E-value=0.015 Score=58.46 Aligned_cols=82 Identities=15% Similarity=0.270 Sum_probs=51.8
Q ss_pred CceEEEEecCC-CCCc----cCCchhhcCCCCcEEeccCCcCCCCC----CC-CCCCCCccEEEecCCCcCCC----CCc
Q 002409 414 PSITVIHLSSK-NLTG----NIPSDLTKLSSLVELWLDGNSLTGPI----PD-FSGCPDLRIIHLEDNQLTGP----LPS 479 (927)
Q Consensus 414 ~~l~~L~L~~n-~l~g----~ip~~i~~L~~L~~L~Ls~N~l~g~~----p~-~~~l~~L~~L~Ls~N~l~g~----~P~ 479 (927)
+.|+.|+|++| +|.. .|-..+..-+.|+.|+|++|.|...- -+ +..-+.|+.|+|+.|+|... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 35778888875 5542 13344555677888888888886421 11 33446788888888887632 223
Q ss_pred cccCCCcccccccccc
Q 002409 480 SLMNLPNLRELYVQNN 495 (927)
Q Consensus 480 ~l~~l~~L~~L~l~~N 495 (927)
.|..-+.|+.|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 4444566888888765
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=88.83 E-value=0.061 Score=54.05 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=60.6
Q ss_pred CCceEEEEecCCCCCcc----CCchhhcCCCCcEEeccCCcCCCCCC-----CCCCCCCccEEEecCCCc--CC-----C
Q 002409 413 QPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIP-----DFSGCPDLRIIHLEDNQL--TG-----P 476 (927)
Q Consensus 413 ~~~l~~L~L~~n~l~g~----ip~~i~~L~~L~~L~Ls~N~l~g~~p-----~~~~l~~L~~L~Ls~N~l--~g-----~ 476 (927)
.+.|+.|+|++|.|... |...+..=+.|+.|+|++|.|+..-- .+..-+.|+.|+|++|.. .| .
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ 148 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 148 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHH
Confidence 35799999999999732 34445566899999999999985322 255566799999997632 12 2
Q ss_pred CCccccCCCccccccccccccc
Q 002409 477 LPSSLMNLPNLRELYVQNNMLS 498 (927)
Q Consensus 477 ~P~~l~~l~~L~~L~l~~N~l~ 498 (927)
|-+.+..-+.|+.|+|+.|.+.
T Consensus 149 ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 149 MMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhCCCcCeEeccCCCcc
Confidence 3344555577888888777654
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=87.26 E-value=0.53 Score=52.42 Aligned_cols=79 Identities=19% Similarity=0.164 Sum_probs=49.2
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
.+|+.+.+.++ ++-.-...+.++++|+.++|.++ ++..-.. |.+|++|+.++|..| ++..-...|.++++|+.++|
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 35667777654 55222345667788888888644 4433332 777888888888766 55333346777788887776
Q ss_pred ccc
Q 002409 493 QNN 495 (927)
Q Consensus 493 ~~N 495 (927)
..+
T Consensus 374 p~~ 376 (394)
T 4fs7_A 374 PKR 376 (394)
T ss_dssp EGG
T ss_pred CCC
Confidence 543
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=87.07 E-value=0.93 Score=49.92 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=45.7
Q ss_pred ceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCC-ccccCCCccccccc
Q 002409 415 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELYV 492 (927)
Q Consensus 415 ~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P-~~l~~l~~L~~L~l 492 (927)
.|+.+++.++ +.-.-...+..+++|+.+.|.+|.++..-+. |.+|.+|+.+.|..| ++ .|. .+|.++.+|+.+.+
T Consensus 264 ~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 264 ALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCC
T ss_pred hhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEE
Confidence 4556666433 4422223456677777777777766654443 677777777777644 44 333 35667777777766
Q ss_pred cc
Q 002409 493 QN 494 (927)
Q Consensus 493 ~~ 494 (927)
..
T Consensus 341 p~ 342 (379)
T 4h09_A 341 PK 342 (379)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 445
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=86.20 E-value=1.5 Score=48.96 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=24.6
Q ss_pred ceecCCCCCCCeEE------CCCCcEEEEeecCcc
Q 002409 722 AIIHRDLKSSNILL------DKHMRAKVSDFGLSK 750 (927)
Q Consensus 722 ~ivHrDLkp~NILl------~~~~~vkL~DFGla~ 750 (927)
.++|+|+.+.|||+ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 46799999999999 456779999998875
No 446
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=85.37 E-value=1.1 Score=49.61 Aligned_cols=81 Identities=23% Similarity=0.346 Sum_probs=52.2
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCC-ccccCCCcccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELY 491 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P-~~l~~l~~L~~L~ 491 (927)
..|+.+.+. ++++..-...|.++++|+.++|..| ++..-.. |.+|++|+.+.|..| ++ .|. ..|.++++|+.++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEE
Confidence 356777775 3455222345667888888888754 4433232 778888888888654 55 344 4677888888888
Q ss_pred ccccccc
Q 002409 492 VQNNMLS 498 (927)
Q Consensus 492 l~~N~l~ 498 (927)
+.+|...
T Consensus 364 ~~~~~~~ 370 (394)
T 4gt6_A 364 YSGSRSQ 370 (394)
T ss_dssp ESSCHHH
T ss_pred ECCceee
Confidence 8776543
No 447
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=83.47 E-value=1.7 Score=48.30 Aligned_cols=99 Identities=15% Similarity=0.334 Sum_probs=66.7
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
..|+.++|.++..+ .-...+.++++|+.+.+. +.++..... |.+|.+|+.++|..| ++..-..+|.++.+|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 35777888765443 334467789999999996 445543333 899999999999865 55333457889999999988
Q ss_pred ccccccccccccccc---ccccccccCC
Q 002409 493 QNNMLSGTVPSSLLS---KNVVLNYAGN 517 (927)
Q Consensus 493 ~~N~l~g~iP~~l~~---~~~~l~~~~n 517 (927)
..+ ++ .|....+. .+..+.+.+|
T Consensus 342 p~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 342 PSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred Ccc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 644 66 66665543 2344455554
No 448
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=82.66 E-value=2.1 Score=47.05 Aligned_cols=89 Identities=16% Similarity=0.201 Sum_probs=63.8
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCC-CCCCCCCccEEEecCCCcCCCCCccccCCCccccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 492 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L~l 492 (927)
..|+.+.+..+ ++..-...+.++.+|+.+.+..+ +..... .|.+|++|+.+.|.+|.++..-...|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 36778888765 55333446778899999999765 443333 2889999999999999888444457889999999988
Q ss_pred cccccccccccccc
Q 002409 493 QNNMLSGTVPSSLL 506 (927)
Q Consensus 493 ~~N~l~g~iP~~l~ 506 (927)
..+ ++ .|+...+
T Consensus 318 p~~-l~-~I~~~aF 329 (379)
T 4h09_A 318 PTA-LK-TIQVYAF 329 (379)
T ss_dssp CTT-CC-EECTTTT
T ss_pred Ccc-cc-EEHHHHh
Confidence 654 66 5655543
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.66 E-value=5 Score=40.49 Aligned_cols=117 Identities=8% Similarity=0.080 Sum_probs=78.3
Q ss_pred cCCCccceecceeecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhHHHhhCCCCceecCCCCCCC
Q 002409 653 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSN 732 (927)
Q Consensus 653 ~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDLkp~N 732 (927)
.||+.++. .+-.+.+...+.|+.-+. ...+ ..-+.++...+++++.+|+....+++.. +|--|.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f-----~~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPF-----DNIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEG-----GGGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCH-----HHHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 67888766 455566666666654432 2222 1234577889999999999998777765 788999999
Q ss_pred eEECCCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCcccc
Q 002409 733 ILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 805 (927)
Q Consensus 733 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~~ 805 (927)
++++.++.+++.-.|+...+.+.. +.+|-+ .-.+=|++..+++++..|+.
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P~~-------------~~ee~f----------L~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDPLP-------------VSEAEF----------LTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSCCC-------------CCHHHH----------HHHHHHHHHHHHCTTCCHHH
T ss_pred EEEcCCCCEEEEEccCccCCCCCC-------------CCHHHH----------HHHHHHHHHHHHcCCCCHHH
Confidence 999999999998777643221110 011111 22355788889999888863
No 450
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=74.79 E-value=1.9 Score=47.78 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=54.1
Q ss_pred CceEEEEecCCCCCccCCchhhcCCCCcEEeccCCcCCCCCCC-CCCCCCccEEEecCCCcCCCCCccccCCCccccc
Q 002409 414 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 490 (927)
Q Consensus 414 ~~l~~L~L~~n~l~g~ip~~i~~L~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~~P~~l~~l~~L~~L 490 (927)
.+|+.++|.++ ++-.-...|.++++|+.++|..| ++..-.. |.+|.+|+.++|..| ++ .+...+.++++|+.+
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 47889999754 66233457889999999999877 6543333 899999999999866 33 345678888888764
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.22 E-value=6.7 Score=39.72 Aligned_cols=115 Identities=10% Similarity=0.076 Sum_probs=76.2
Q ss_pred cCCCccceecceeecCeEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHHHhHhH-HHhhCCCCceecCCCCCC
Q 002409 653 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIE-YLHTGCVPAIIHRDLKSS 731 (927)
Q Consensus 653 ~HpnIv~l~g~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~-yLH~~~~~~ivHrDLkp~ 731 (927)
.||.. -..+-.+++...+.|+.-+++.=.+. -+.++...+++++.+|+.... +++.. +|--|.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-------i~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-------IRKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-------HHTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-------HHhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67777 44445667777777775544322222 245678889999999988877 66664 78899999
Q ss_pred CeEECCCCcEEEEeecCcccccCCCCceeeeeccCCCccCccccccCcCCCccceeeHHHHHHHHHhCCCccc
Q 002409 732 NILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 804 (927)
Q Consensus 732 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvvL~elltG~~p~~ 804 (927)
||+++.++.+++.-.|+-.. ++|.-+.. .-=.-.+=|++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~------------------lpP~e~~e-----e~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKES------------------LPPDEWDD-----ERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTT------------------BSSCSCCH-----HHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCccc------------------CCCCCCCH-----HHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988776432 22222110 0011235578888888887775
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=68.64 E-value=0.54 Score=53.77 Aligned_cols=59 Identities=5% Similarity=0.022 Sum_probs=17.1
Q ss_pred hccccccCceEEEEEEECC-CcEEEE------EEeecCC--chhhHhHHHHHHHHhhccCCCccceeccee
Q 002409 604 EKKIGSGGFGVVYYGKLKD-GKEIAV------KVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ 665 (927)
Q Consensus 604 ~~~IG~G~fG~Vy~~~~~~-g~~VAV------K~l~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~g~~~ 665 (927)
.+.|| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45666 99999998864 357888 6655322 222346788999999999999999988764
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=57.66 E-value=2 Score=31.74 Aligned_cols=26 Identities=31% Similarity=0.405 Sum_probs=9.7
Q ss_pred eeeccchh-hhhhhhhhheeeeeeecC
Q 002409 532 IIIGSSVG-AAVLLLATVVSCLFMHKG 557 (927)
Q Consensus 532 vii~~~~~-~~~lll~~~l~~~~~~~~ 557 (927)
.|++.+++ +++++++.++.+++++++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 34443443 333333333333334333
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=56.14 E-value=1.2 Score=32.78 Aligned_cols=28 Identities=25% Similarity=0.426 Sum_probs=11.9
Q ss_pred ceeeeccchhhhhhhhhhheeeeeeecC
Q 002409 530 LNIIIGSSVGAAVLLLATVVSCLFMHKG 557 (927)
Q Consensus 530 ~~vii~~~~~~~~lll~~~l~~~~~~~~ 557 (927)
...+++.++++++++++.+...+|.+|+
T Consensus 11 ~~~Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 11 LTSIISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHhheehh
Confidence 4445555555443333333333343333
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=47.74 E-value=2.3 Score=31.35 Aligned_cols=7 Identities=29% Similarity=0.610 Sum_probs=2.8
Q ss_pred eeccchh
Q 002409 533 IIGSSVG 539 (927)
Q Consensus 533 ii~~~~~ 539 (927)
|++.+++
T Consensus 12 IA~gVVg 18 (44)
T 2l2t_A 12 IAAGVIG 18 (44)
T ss_dssp HHHHHHH
T ss_pred EEEeehH
Confidence 3443443
No 456
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=30.92 E-value=3.2e+02 Score=25.13 Aligned_cols=89 Identities=9% Similarity=0.096 Sum_probs=53.0
Q ss_pred eeeecccCCceEEEeEEeeecCcCCCCCCCeeEEEECCceeeEEeeC-CCCccEEE--EEEEEecCCCceEEEecC-CCC
Q 002409 89 CYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHWSTIVIS-DAATIEVR--ELIFLASSPKIDVCLSNA-TTG 164 (927)
Q Consensus 89 cy~l~~~~~~~ylvr~~f~yg~~d~~~~~p~fd~~~~~~~w~~v~~~-~~~~~~~~--e~~~~~~~~~~~vcl~~~-~~~ 164 (927)
-|++.+.+.|.|.|+..|.=|.. ..-.++|.|+|+.-.+|... ..+...+. .+-+.-.+..-.+-|..+ +.|
T Consensus 42 ~~~V~v~~aG~Y~l~~ryang~~----~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~ntI~l~~~~~~g 117 (145)
T 2w3j_A 42 VWSLSAASAKTYTAQIRFGNGGT----SARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGTNSIKLVAETADG 117 (145)
T ss_dssp EEEEEESSCEEEEEEEEEECCSS----SCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEEEEEEEEECSTTC
T ss_pred EEEEECCCCeEEEEEEEEECCCC----CCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCceEEEEEEecCcC
Confidence 56777777899999887752222 23468999999876677652 22211121 222222333334555443 456
Q ss_pred CceeeeeeeeecCCccc
Q 002409 165 QPFISTLELRQFNGSVY 181 (927)
Q Consensus 165 ~pfis~le~~~l~~~~y 181 (927)
.|-|-.|+|.+.+....
T Consensus 118 ~~niD~i~v~~~~~~~~ 134 (145)
T 2w3j_A 118 LANIDSIRVTGNGITPA 134 (145)
T ss_dssp CCEEEEEEECSTTEEEC
T ss_pred CEEEEEEEEEcCCCCCC
Confidence 79999999987665443
No 457
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=26.48 E-value=3.7e+02 Score=24.46 Aligned_cols=85 Identities=12% Similarity=0.132 Sum_probs=51.2
Q ss_pred eeeecccCCceEEEeEEeeecCcCCCCCCCeeEEEECCcee-eEEeeC-CCCccEEEE--EEEEecCCCceEEEec-CCC
Q 002409 89 CYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHW-STIVIS-DAATIEVRE--LIFLASSPKIDVCLSN-ATT 163 (927)
Q Consensus 89 cy~l~~~~~~~ylvr~~f~yg~~d~~~~~p~fd~~~~~~~w-~~v~~~-~~~~~~~~e--~~~~~~~~~~~vcl~~-~~~ 163 (927)
-|++.+.+.|.|-|+..|.=|.. ..-.++|.|+|..- .+|... ..+...+.+ .-+.-....=.+.|.. .+.
T Consensus 43 ~~~V~v~~aG~Y~l~~ryan~~~----~~~~~~l~VNG~~~~~~v~~p~Tg~w~~w~~~~~~v~L~aG~ntI~l~~~~~~ 118 (144)
T 2w47_A 43 EWNVNAPSSGSYALIFRYANGTT----ANRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVANLNQGNNVIRATAIASD 118 (144)
T ss_dssp EEEEEESSSEEEEEEEEEECCSS----SCCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEEECSTT
T ss_pred EEEEECCCCcEEEEEEEEECCCC----CCeEEEEEECCeEeeeEEEecCCCCCCeeEEEEEEEEECCCccEEEEEEeCCC
Confidence 67777778899999888764332 23468999999863 455442 122112222 2222333344566653 345
Q ss_pred CCceeeeeeeeecC
Q 002409 164 GQPFISTLELRQFN 177 (927)
Q Consensus 164 ~~pfis~le~~~l~ 177 (927)
|.|.|..|+|.+.+
T Consensus 119 g~~niD~i~v~~~~ 132 (144)
T 2w47_A 119 GGPNVDYLKVFSAN 132 (144)
T ss_dssp CCCEEEEEEEEECT
T ss_pred CCEEEeEEEEEeCC
Confidence 67999999998754
No 458
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=26.11 E-value=23 Score=21.85 Aligned_cols=16 Identities=31% Similarity=0.846 Sum_probs=14.0
Q ss_pred CCccCCCCCCCCcccc
Q 002409 205 APVRYPDDPFDRIWES 220 (927)
Q Consensus 205 ~~iryp~D~~dR~W~p 220 (927)
+..|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 5679999999999985
No 459
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=25.44 E-value=26 Score=21.80 Aligned_cols=17 Identities=29% Similarity=0.849 Sum_probs=14.4
Q ss_pred CCccCCCCCCCCccccC
Q 002409 205 APVRYPDDPFDRIWESD 221 (927)
Q Consensus 205 ~~iryp~D~~dR~W~p~ 221 (927)
+..|-|+|.|.-+|+-.
T Consensus 6 fllrnpndkyepfwede 22 (27)
T 1nro_R 6 FLLRNPNDKYEPFWEDE 22 (27)
T ss_pred ccccCCCcccCccccch
Confidence 56799999999999853
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.36 E-value=5.5e+02 Score=27.43 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=43.3
Q ss_pred eEEEEEEeccCCchhhhcccccccccccCHHHHHHHHHHH--HhHhHHHhhCCCC-ce-ecCCCCCCCeEECCCCc-EEE
Q 002409 669 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDA--AKGIEYLHTGCVP-AI-IHRDLKSSNILLDKHMR-AKV 743 (927)
Q Consensus 669 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qi--a~gL~yLH~~~~~-~i-vHrDLkp~NILl~~~~~-vkL 743 (927)
..+++|||.+|..|.+.-+.. ....+.... +.++ +-++..+..+.+. +. .+.--.++|||++++.. +.+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~--~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ 229 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS--APEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVP 229 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS--HHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEE
T ss_pred cceehhhhcCCCccccchhhh--hhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEE
Confidence 567999999976665532211 011223222 2222 2345555555431 11 12235889999987654 888
Q ss_pred EeecCccc
Q 002409 744 SDFGLSKF 751 (927)
Q Consensus 744 ~DFGla~~ 751 (927)
+|-+++..
T Consensus 230 IDhn~af~ 237 (342)
T 1cja_A 230 IDSKIIPL 237 (342)
T ss_dssp CSCCCCCC
T ss_pred EcCCcccc
Confidence 99988753
Done!