Query 002410
Match_columns 927
No_of_seqs 866 out of 4468
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 01:15:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 6.4E-50 2.2E-54 444.6 20.1 260 605-883 41-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-50 7.3E-55 442.4 15.5 261 604-883 12-290 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 3.6E-50 1.2E-54 442.5 16.9 264 600-882 21-306 (308)
4 3omv_A RAF proto-oncogene seri 100.0 9.3E-49 3.2E-53 429.8 20.6 259 605-882 36-300 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 5.3E-48 1.8E-52 428.0 20.0 260 607-891 60-325 (336)
6 4b9d_A Serine/threonine-protei 100.0 7.3E-48 2.5E-52 428.8 19.8 250 606-876 25-277 (350)
7 4fih_A Serine/threonine-protei 100.0 6.4E-48 2.2E-52 428.6 19.1 248 606-875 75-323 (346)
8 3fpq_A Serine/threonine-protei 100.0 4E-47 1.4E-51 413.8 21.4 244 608-875 29-282 (290)
9 3hmm_A TGF-beta receptor type- 100.0 2.8E-47 9.6E-52 419.7 18.8 268 607-884 5-299 (303)
10 4ase_A Vascular endothelial gr 100.0 1.2E-47 4.3E-52 429.7 15.6 267 601-885 60-350 (353)
11 4fie_A Serine/threonine-protei 100.0 7.2E-47 2.5E-51 430.3 20.5 248 606-875 152-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-47 5.1E-52 419.5 14.0 246 606-874 33-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 2.2E-46 7.4E-51 404.6 18.0 244 606-875 14-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-46 4.7E-51 411.6 10.8 246 606-875 25-281 (304)
15 4g31_A Eukaryotic translation 100.0 3.6E-45 1.2E-49 401.4 20.0 249 606-875 6-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 1E-42 3.5E-47 386.4 22.9 277 606-885 40-318 (321)
17 4b99_A Mitogen-activated prote 100.0 7E-43 2.4E-47 397.7 20.8 261 606-876 55-345 (398)
18 3uim_A Brassinosteroid insensi 100.0 2.3E-42 7.9E-47 384.0 18.0 287 597-883 20-312 (326)
19 4f9c_A Cell division cycle 7-r 100.0 7.2E-42 2.5E-46 385.2 21.8 194 606-810 22-249 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 1.4E-41 4.9E-46 405.2 20.5 250 606-875 158-410 (573)
21 3v5w_A G-protein coupled recep 100.0 3.3E-41 1.1E-45 400.2 20.3 247 606-875 190-449 (689)
22 3p86_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 367.8 18.4 263 602-884 34-300 (309)
23 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-40 5.7E-45 366.5 19.1 258 605-884 10-284 (310)
24 2psq_A Fibroblast growth facto 100.0 5.1E-40 1.7E-44 372.5 21.8 264 604-886 80-368 (370)
25 4hcu_A Tyrosine-protein kinase 100.0 4E-40 1.4E-44 355.7 18.8 257 605-883 10-267 (269)
26 3fxz_A Serine/threonine-protei 100.0 7.7E-40 2.6E-44 359.5 20.9 248 606-875 21-269 (297)
27 3kul_A Ephrin type-A receptor 100.0 3E-40 1E-44 367.7 17.8 264 601-885 45-316 (325)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.7E-40 9.2E-45 356.7 16.8 260 603-884 6-266 (268)
29 2nru_A Interleukin-1 receptor- 100.0 3.3E-39 1.1E-43 355.3 25.1 280 595-882 13-306 (307)
30 3soc_A Activin receptor type-2 100.0 2.3E-40 8E-45 367.9 15.0 267 605-884 24-320 (322)
31 4eqm_A Protein kinase; transfe 100.0 9E-40 3.1E-44 358.4 19.2 264 605-886 11-279 (294)
32 3ugc_A Tyrosine-protein kinase 100.0 6E-41 2.1E-45 367.2 9.4 267 602-882 7-291 (295)
33 3gen_A Tyrosine-protein kinase 100.0 8.5E-40 2.9E-44 355.7 18.4 261 602-884 21-282 (283)
34 3q4u_A Activin receptor type-1 100.0 1.7E-39 5.9E-44 356.1 19.4 260 605-880 8-300 (301)
35 2c30_A Serine/threonine-protei 100.0 6.4E-39 2.2E-43 356.3 24.1 247 608-876 48-295 (321)
36 3zgw_A Maternal embryonic leuc 100.0 1.9E-39 6.4E-44 364.3 19.1 249 605-876 10-261 (347)
37 3fe3_A MAP/microtubule affinit 100.0 2.2E-39 7.4E-44 361.2 19.2 246 606-876 16-265 (328)
38 3tt0_A Basic fibroblast growth 100.0 2E-39 7E-44 369.2 19.1 273 601-892 65-362 (382)
39 4euu_A Serine/threonine-protei 100.0 1.7E-38 5.9E-43 352.0 25.4 273 606-883 10-310 (319)
40 2qol_A Ephrin receptor; recept 100.0 1.1E-39 3.9E-44 370.1 15.3 263 601-884 41-311 (373)
41 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-39 3.8E-44 370.7 14.6 259 604-883 113-375 (377)
42 1opk_A P150, C-ABL, proto-onco 100.0 1.6E-39 5.6E-44 382.5 16.4 259 603-882 218-478 (495)
43 1qcf_A Haematopoetic cell kina 100.0 9.3E-40 3.2E-44 380.6 14.0 260 603-884 186-446 (454)
44 1csn_A Casein kinase-1; phosph 100.0 1.4E-38 4.9E-43 348.3 22.4 264 605-885 10-286 (298)
45 1mp8_A Focal adhesion kinase 1 100.0 2.4E-39 8.3E-44 352.1 16.0 261 602-884 12-278 (281)
46 1o6l_A RAC-beta serine/threoni 100.0 9.6E-39 3.3E-43 357.2 20.9 247 606-876 6-261 (337)
47 3t9t_A Tyrosine-protein kinase 100.0 5E-39 1.7E-43 346.1 17.9 256 605-882 8-264 (267)
48 3niz_A Rhodanese family protei 100.0 9.9E-39 3.4E-43 353.1 20.5 261 605-875 21-300 (311)
49 3kfa_A Tyrosine-protein kinase 100.0 3.1E-39 1.1E-43 351.9 16.1 263 601-884 9-273 (288)
50 4e5w_A Tyrosine-protein kinase 100.0 7.9E-40 2.7E-44 359.2 11.1 268 601-882 17-302 (302)
51 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-38 3.8E-43 352.0 20.1 262 605-889 8-270 (307)
52 2ivs_A Proto-oncogene tyrosine 100.0 5E-39 1.7E-43 354.6 17.0 262 603-883 21-312 (314)
53 3tki_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 355.7 18.2 251 606-876 8-262 (323)
54 3dtc_A Mitogen-activated prote 100.0 4.3E-39 1.5E-43 347.6 15.5 250 605-880 7-271 (271)
55 1luf_A Muscle-specific tyrosin 100.0 7.5E-39 2.6E-43 358.0 17.9 262 604-884 46-337 (343)
56 3vhe_A Vascular endothelial gr 100.0 2.8E-39 9.6E-44 364.0 14.4 264 602-883 19-356 (359)
57 2bdw_A Hypothetical protein K1 100.0 1.6E-38 5.6E-43 359.0 20.6 255 601-876 25-285 (362)
58 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.9E-39 1E-43 376.1 14.9 261 603-885 182-443 (452)
59 3poz_A Epidermal growth factor 100.0 6.3E-39 2.1E-43 357.1 16.9 259 603-883 13-279 (327)
60 2izr_A Casein kinase I isoform 100.0 1.9E-38 6.6E-43 353.5 20.8 261 606-884 10-283 (330)
61 2y0a_A Death-associated protei 100.0 2.1E-38 7E-43 353.0 20.8 252 604-876 10-272 (326)
62 3l9p_A Anaplastic lymphoma kin 100.0 2.8E-39 9.6E-44 366.0 13.8 266 601-885 67-348 (367)
63 3lb7_A RAF proto-oncogene seri 100.0 1.5E-38 5E-43 351.1 19.0 265 601-884 32-302 (307)
64 2yab_A Death-associated protei 100.0 3.8E-38 1.3E-42 355.7 22.7 249 606-875 13-272 (361)
65 3qup_A Tyrosine-protein kinase 100.0 7.5E-39 2.6E-43 355.3 16.7 264 603-885 21-301 (323)
66 4f0f_A Serine/threonine-protei 100.0 2.1E-38 7.2E-43 345.4 19.9 254 603-880 17-287 (287)
67 3lxl_A Tyrosine-protein kinase 100.0 1.2E-39 4E-44 362.7 10.1 269 604-886 22-307 (327)
68 1t46_A HOMO sapiens V-KIT hard 100.0 1E-38 3.6E-43 351.9 17.6 265 602-884 20-309 (313)
69 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-38 4.5E-43 370.4 19.3 253 605-884 193-447 (450)
70 3gni_B Strad alpha; kinase fol 100.0 3E-38 1E-42 360.2 21.8 269 606-880 26-340 (389)
71 1qpc_A LCK kinase; alpha beta 100.0 7.5E-39 2.6E-43 347.5 16.0 261 602-884 10-271 (279)
72 3qd2_B Eukaryotic translation 100.0 2.5E-38 8.4E-43 351.4 20.0 250 605-875 6-325 (332)
73 3c0i_A Peripheral plasma membr 100.0 1.2E-38 4E-43 358.7 17.6 256 602-875 21-286 (351)
74 4fvq_A Tyrosine-protein kinase 100.0 8.1E-39 2.8E-43 348.8 15.4 256 602-884 5-277 (289)
75 1ob3_A PFPK5, cell division co 100.0 1.8E-38 6E-43 346.7 18.1 259 607-875 4-280 (288)
76 1rjb_A FL cytokine receptor; k 100.0 1.1E-38 3.9E-43 357.0 16.9 267 601-885 41-337 (344)
77 2zv2_A Calcium/calmodulin-depe 100.0 3.3E-38 1.1E-42 346.1 20.3 247 606-875 14-292 (298)
78 3lxp_A Non-receptor tyrosine-p 100.0 5.6E-39 1.9E-43 356.0 14.0 261 608-884 34-312 (318)
79 1tki_A Titin; serine kinase, m 100.0 1.6E-38 5.6E-43 353.1 17.7 250 606-876 6-258 (321)
80 3cc6_A Protein tyrosine kinase 100.0 1.9E-38 6.6E-43 344.8 17.8 259 605-885 12-276 (281)
81 3soa_A Calcium/calmodulin-depe 100.0 3.9E-38 1.3E-42 365.0 21.3 253 604-876 10-268 (444)
82 2pvf_A Fibroblast growth facto 100.0 1.8E-38 6.3E-43 354.3 17.7 266 602-886 32-322 (334)
83 3o0g_A Cell division protein k 100.0 2.7E-38 9.2E-43 345.8 18.5 260 607-875 4-282 (292)
84 3mdy_A Bone morphogenetic prot 100.0 9.6E-38 3.3E-42 347.9 23.0 269 600-884 32-333 (337)
85 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.2E-39 2.8E-43 360.1 14.3 250 602-875 20-280 (353)
86 3kmu_A ILK, integrin-linked ki 100.0 4.4E-38 1.5E-42 339.0 19.4 252 605-882 10-270 (271)
87 4dc2_A Protein kinase C IOTA t 100.0 4.1E-38 1.4E-42 359.1 20.0 249 605-870 52-307 (396)
88 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-38 9.2E-43 351.9 17.7 249 611-875 17-270 (325)
89 3og7_A AKAP9-BRAF fusion prote 100.0 2.5E-38 8.6E-43 345.6 16.7 264 600-882 19-288 (289)
90 4aw2_A Serine/threonine-protei 100.0 2.8E-38 9.4E-43 365.2 17.9 254 606-876 75-339 (437)
91 1kob_A Twitchin; kinase, intra 100.0 7.2E-38 2.5E-42 356.6 21.0 251 606-876 52-305 (387)
92 1b6c_B TGF-B superfamily recep 100.0 1.2E-37 4E-42 348.1 22.4 270 599-884 36-338 (342)
93 4eut_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 358.1 20.9 274 606-884 10-311 (396)
94 2pmi_A Negative RE, cyclin-dep 100.0 5.2E-38 1.8E-42 348.2 18.8 263 605-875 5-293 (317)
95 3a8x_A Protein kinase C IOTA t 100.0 7.3E-38 2.5E-42 351.3 20.2 248 606-870 10-264 (345)
96 3op5_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42 353.3 20.9 270 604-885 34-332 (364)
97 1fot_A TPK1 delta, CAMP-depend 100.0 1E-37 3.5E-42 346.2 21.0 244 606-876 7-259 (318)
98 3kex_A Receptor tyrosine-prote 100.0 3.8E-38 1.3E-42 350.4 17.6 257 605-883 13-277 (325)
99 2h34_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 344.2 21.1 259 605-884 34-298 (309)
100 2h8h_A Proto-oncogene tyrosine 100.0 9.2E-39 3.2E-43 379.6 13.3 261 602-884 264-525 (535)
101 3ll6_A Cyclin G-associated kin 100.0 4.6E-38 1.6E-42 350.0 18.2 261 602-885 25-311 (337)
102 1u59_A Tyrosine-protein kinase 100.0 9.1E-38 3.1E-42 340.7 20.1 258 607-886 11-276 (287)
103 4fr4_A YANK1, serine/threonine 100.0 1E-37 3.5E-42 354.6 21.0 249 605-875 15-271 (384)
104 4hgt_A Casein kinase I isoform 100.0 1.2E-37 4E-42 340.5 20.4 265 604-885 8-283 (296)
105 3v8s_A RHO-associated protein 100.0 2.4E-38 8.3E-43 362.8 15.7 251 606-876 70-330 (410)
106 2wqm_A Serine/threonine-protei 100.0 1.4E-37 4.6E-42 343.1 21.1 263 606-885 33-300 (310)
107 3a62_A Ribosomal protein S6 ki 100.0 6.4E-38 2.2E-42 349.1 18.4 249 604-876 16-277 (327)
108 3f66_A Hepatocyte growth facto 100.0 1.4E-37 4.9E-42 340.7 20.8 258 607-885 27-294 (298)
109 2x4f_A Myosin light chain kina 100.0 6.4E-38 2.2E-42 355.6 18.6 250 610-879 94-348 (373)
110 3uzp_A CKI-delta, CKID, casein 100.0 3E-37 1E-41 337.4 23.2 263 606-885 10-283 (296)
111 2buj_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 346.0 18.6 263 604-883 28-307 (317)
112 3p1a_A MYT1 kinase, membrane-a 100.0 1.9E-37 6.6E-42 342.7 21.5 250 599-875 51-304 (311)
113 3g33_A Cell division protein k 100.0 4.9E-38 1.7E-42 346.4 16.8 266 600-875 4-296 (308)
114 2a19_B Interferon-induced, dou 100.0 1.1E-37 3.9E-42 338.4 19.4 255 600-885 6-277 (284)
115 3f3z_A Calcium/calmodulin-depe 100.0 8.5E-38 2.9E-42 338.8 18.1 250 604-875 8-261 (277)
116 1p4o_A Insulin-like growth fac 100.0 2.4E-38 8.1E-43 350.9 14.0 264 601-883 21-300 (322)
117 4agu_A Cyclin-dependent kinase 100.0 7.3E-38 2.5E-42 345.2 17.8 264 606-876 4-285 (311)
118 1xjd_A Protein kinase C, theta 100.0 2.7E-38 9.2E-43 354.7 14.5 246 605-874 17-268 (345)
119 3lzb_A Epidermal growth factor 100.0 5.3E-38 1.8E-42 349.8 16.7 259 604-884 14-280 (327)
120 1mqb_A Ephrin type-A receptor 100.0 7.1E-38 2.4E-42 349.6 17.7 264 601-885 40-312 (333)
121 2vd5_A DMPK protein; serine/th 100.0 4.8E-38 1.7E-42 360.6 16.6 254 605-876 61-328 (412)
122 2xir_A Vascular endothelial gr 100.0 7.3E-38 2.5E-42 345.6 17.3 265 603-885 25-313 (316)
123 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.9E-38 9.8E-43 353.1 14.0 245 606-876 10-259 (336)
124 3pls_A Macrophage-stimulating 100.0 2.6E-37 9E-42 338.2 21.4 259 608-886 24-291 (298)
125 3g2f_A Bone morphogenetic prot 100.0 9.5E-38 3.2E-42 348.2 18.1 271 605-888 13-324 (336)
126 1rdq_E PKA C-alpha, CAMP-depen 100.0 9.9E-38 3.4E-42 350.9 18.1 244 606-876 42-294 (350)
127 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-38 5.8E-43 353.3 11.7 266 604-883 40-323 (326)
128 3ork_A Serine/threonine protei 100.0 6.4E-38 2.2E-42 346.3 16.0 261 605-884 12-283 (311)
129 2w4o_A Calcium/calmodulin-depe 100.0 1E-37 3.5E-42 350.8 17.9 249 605-875 53-305 (349)
130 2a2a_A Death-associated protei 100.0 4.2E-37 1.4E-41 341.3 22.6 251 604-875 11-272 (321)
131 3hko_A Calcium/calmodulin-depe 100.0 1.1E-37 3.7E-42 349.0 18.0 257 604-876 25-331 (345)
132 3gxj_A TGF-beta receptor type- 100.0 2.2E-39 7.5E-44 355.4 4.1 261 606-884 4-299 (303)
133 2i0e_A Protein kinase C-beta I 100.0 9.5E-38 3.3E-42 351.3 17.2 249 604-876 19-277 (353)
134 2jii_A Serine/threonine-protei 100.0 1.8E-37 6.3E-42 348.8 19.5 265 605-885 42-339 (352)
135 2eue_A Carbon catabolite derep 100.0 1.3E-37 4.5E-42 337.1 17.5 244 606-875 14-262 (275)
136 3dbq_A Dual specificity protei 100.0 1.9E-37 6.3E-42 347.6 19.4 249 606-876 10-274 (343)
137 2yex_A Serine/threonine-protei 100.0 4.4E-37 1.5E-41 332.6 21.5 251 605-875 7-261 (276)
138 3llt_A Serine/threonine kinase 100.0 6E-38 2.1E-42 353.6 15.3 265 601-875 31-355 (360)
139 3uc3_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 351.2 18.3 251 606-876 21-275 (361)
140 2v62_A Serine/threonine-protei 100.0 6.6E-38 2.3E-42 351.5 15.4 269 601-882 33-328 (345)
141 3brb_A Proto-oncogene tyrosine 100.0 1.2E-37 4.1E-42 344.0 17.3 263 602-883 31-309 (313)
142 3fdn_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 337.0 18.1 245 606-876 10-258 (279)
143 2qr7_A Ribosomal protein S6 ki 100.0 1.3E-37 4.6E-42 348.8 17.8 252 604-876 21-278 (342)
144 3c1x_A Hepatocyte growth facto 100.0 1.1E-37 3.9E-42 353.5 17.4 258 607-885 91-358 (373)
145 1xbb_A Tyrosine-protein kinase 100.0 1.4E-37 4.8E-42 339.9 17.5 257 606-885 17-282 (291)
146 1fvr_A Tyrosine-protein kinase 100.0 6.4E-38 2.2E-42 348.7 14.9 264 600-884 20-302 (327)
147 2i1m_A Macrophage colony-stimu 100.0 3.5E-38 1.2E-42 351.4 12.4 265 602-884 43-328 (333)
148 3is5_A Calcium-dependent prote 100.0 3.8E-37 1.3E-41 335.7 20.0 251 605-875 22-278 (285)
149 2jam_A Calcium/calmodulin-depe 100.0 4.5E-37 1.6E-41 338.0 20.7 250 604-875 8-261 (304)
150 2ozo_A Tyrosine-protein kinase 100.0 3.2E-37 1.1E-41 371.8 21.2 252 612-885 343-601 (613)
151 3cok_A Serine/threonine-protei 100.0 2.5E-37 8.5E-42 335.3 18.3 247 606-875 12-262 (278)
152 3kk8_A Calcium/calmodulin depe 100.0 3.6E-37 1.2E-41 334.9 19.2 250 606-876 7-262 (284)
153 3bhy_A Death-associated protei 100.0 2.8E-37 9.6E-42 335.6 18.4 258 604-882 4-274 (283)
154 2ac3_A MAP kinase-interacting 100.0 4.8E-37 1.6E-41 339.5 19.8 257 607-875 14-295 (316)
155 1byg_A CSK, protein (C-termina 100.0 5.3E-38 1.8E-42 340.8 11.8 254 604-884 20-275 (278)
156 4ejn_A RAC-alpha serine/threon 100.0 8.1E-38 2.8E-42 363.4 14.1 248 605-875 148-404 (446)
157 1u5q_A Serine/threonine protei 100.0 6.2E-37 2.1E-41 344.2 20.7 247 604-876 53-306 (348)
158 2r5t_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 353.2 14.8 250 605-878 38-292 (373)
159 2zmd_A Dual specificity protei 100.0 5.5E-37 1.9E-41 350.1 20.4 249 606-876 57-321 (390)
160 2rku_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 336.2 18.9 247 606-876 16-266 (294)
161 2y94_A 5'-AMP-activated protei 100.0 4.2E-37 1.4E-41 358.9 19.8 245 606-875 17-266 (476)
162 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.4E-37 4.8E-42 346.5 15.0 261 605-875 34-318 (329)
163 2clq_A Mitogen-activated prote 100.0 8.4E-37 2.9E-41 333.7 20.8 248 610-875 27-278 (295)
164 2yfx_A Tyrosine-protein kinase 100.0 1.3E-37 4.3E-42 346.3 14.1 267 600-885 25-307 (327)
165 4aaa_A Cyclin-dependent kinase 100.0 1.9E-37 6.6E-42 345.5 15.5 262 606-876 26-307 (331)
166 3eqc_A Dual specificity mitoge 100.0 2E-37 6.7E-42 349.5 15.7 267 601-876 29-325 (360)
167 3dls_A PAS domain-containing s 100.0 2.7E-37 9.1E-42 345.4 16.6 242 604-876 23-275 (335)
168 1vzo_A Ribosomal protein S6 ki 100.0 2E-37 6.7E-42 349.3 15.6 254 605-877 54-323 (355)
169 3oz6_A Mitogen-activated prote 100.0 2.8E-37 9.7E-42 352.1 16.6 264 602-876 6-329 (388)
170 4fl3_A Tyrosine-protein kinase 100.0 3.6E-37 1.2E-41 372.4 18.4 249 611-882 375-631 (635)
171 1t4h_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 332.0 21.0 245 607-875 28-282 (290)
172 3mtl_A Cell division protein k 100.0 7.5E-38 2.6E-42 348.0 11.4 259 607-875 4-281 (324)
173 3ttj_A Mitogen-activated prote 100.0 1.1E-36 3.8E-41 355.2 21.8 260 606-876 63-356 (464)
174 1x8b_A WEE1HU, WEE1-like prote 100.0 3.8E-37 1.3E-41 334.4 16.4 246 603-875 9-279 (289)
175 2vgo_A Serine/threonine-protei 100.0 6.5E-37 2.2E-41 333.3 17.9 245 605-875 14-262 (284)
176 2acx_A G protein-coupled recep 100.0 7.4E-37 2.5E-41 362.1 19.8 251 606-876 185-445 (576)
177 2w5a_A Serine/threonine-protei 100.0 2E-37 6.7E-42 336.1 13.7 253 606-878 7-270 (279)
178 2owb_A Serine/threonine-protei 100.0 8.7E-37 3E-41 341.0 19.3 248 605-876 41-292 (335)
179 3a7i_A MST3 kinase, serine/thr 100.0 9.6E-37 3.3E-41 335.1 19.3 247 606-876 23-271 (303)
180 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-36 4.7E-41 343.5 21.1 254 604-884 64-341 (365)
181 3lm5_A Serine/threonine-protei 100.0 8.6E-37 3E-41 339.9 18.9 259 599-876 22-288 (327)
182 1nxk_A MAP kinase-activated pr 100.0 2.1E-36 7.1E-41 346.4 22.4 245 611-876 68-322 (400)
183 1ua2_A CAK, cell division prot 100.0 8.5E-37 2.9E-41 342.7 18.8 263 604-876 9-292 (346)
184 3mi9_A Cell division protein k 100.0 8.7E-37 3E-41 343.0 18.4 265 605-875 17-311 (351)
185 1u46_A ACK-1, activated CDC42 100.0 5.6E-37 1.9E-41 334.4 16.4 260 604-884 17-286 (291)
186 2h6d_A 5'-AMP-activated protei 100.0 8.9E-37 3E-41 330.4 17.7 246 606-876 12-262 (276)
187 3i6u_A CDS1, serine/threonine- 100.0 6.9E-37 2.4E-41 352.6 17.6 254 601-875 131-399 (419)
188 3sv0_A Casein kinase I-like; t 100.0 3.6E-36 1.2E-40 351.6 23.4 262 606-884 8-280 (483)
189 2j7t_A Serine/threonine-protei 100.0 6.7E-37 2.3E-41 335.9 16.2 251 605-875 19-275 (302)
190 3rp9_A Mitogen-activated prote 100.0 1.5E-36 5.3E-41 353.8 20.2 191 606-803 54-279 (458)
191 3com_A Serine/threonine-protei 100.0 2E-36 6.7E-41 334.2 19.5 252 602-875 26-278 (314)
192 3nsz_A CK II alpha, casein kin 100.0 4.3E-36 1.5E-40 333.9 22.3 256 605-875 36-319 (330)
193 1cm8_A Phosphorylated MAP kina 100.0 1.1E-36 3.8E-41 344.7 17.4 255 606-876 26-308 (367)
194 1wak_A Serine/threonine-protei 100.0 1.4E-36 4.6E-41 346.3 18.1 267 599-875 31-391 (397)
195 3n9x_A Phosphotransferase; mal 100.0 4.7E-36 1.6E-40 347.1 22.5 197 606-809 27-253 (432)
196 3lij_A Calcium/calmodulin depe 100.0 1.8E-36 6E-41 356.8 19.2 252 603-876 35-292 (494)
197 3mwu_A Calmodulin-domain prote 100.0 1.6E-36 5.5E-41 356.4 18.6 252 603-876 20-277 (486)
198 2r3i_A Cell division protein k 100.0 2.3E-36 8E-41 331.0 18.6 261 607-875 5-283 (299)
199 3fme_A Dual specificity mitoge 100.0 9.7E-37 3.3E-41 332.3 15.4 252 604-875 6-266 (290)
200 2ycf_A Serine/threonine-protei 100.0 2.3E-36 8E-41 335.3 18.7 254 601-875 6-274 (322)
201 3nyv_A Calmodulin-domain prote 100.0 1.1E-36 3.6E-41 357.8 16.6 253 602-876 23-282 (484)
202 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.4E-36 1.2E-40 355.4 21.1 251 607-875 187-448 (543)
203 2wtk_C Serine/threonine-protei 100.0 6.2E-36 2.1E-40 328.6 21.6 249 606-876 6-264 (305)
204 2y7j_A Phosphorylase B kinase 100.0 6.2E-36 2.1E-40 338.3 21.8 250 605-875 94-359 (365)
205 3byv_A Rhoptry kinase; malaria 100.0 2.2E-37 7.5E-42 351.7 9.5 240 606-875 74-359 (377)
206 2vwi_A Serine/threonine-protei 100.0 5.5E-37 1.9E-41 336.2 12.2 261 605-875 15-287 (303)
207 3pg1_A Mitogen-activated prote 100.0 1.5E-36 5.2E-41 342.4 15.4 261 605-876 22-317 (362)
208 3q60_A ROP5B; pseudokinase, tr 100.0 9.3E-37 3.2E-41 345.7 13.5 251 607-875 64-352 (371)
209 3qyz_A Mitogen-activated prote 100.0 4.8E-36 1.7E-40 338.9 19.4 260 606-876 28-314 (364)
210 1z57_A Dual specificity protei 100.0 5.6E-36 1.9E-40 333.2 19.6 263 604-876 13-329 (339)
211 2j0j_A Focal adhesion kinase 1 100.0 2.5E-36 8.5E-41 366.4 18.1 261 602-884 387-653 (656)
212 1phk_A Phosphorylase kinase; g 100.0 4.2E-36 1.4E-40 328.9 17.9 249 606-875 18-283 (298)
213 4e7w_A Glycogen synthase kinas 100.0 2E-36 6.8E-41 346.0 16.0 260 606-876 41-322 (394)
214 3q5i_A Protein kinase; CDPK, m 100.0 3.1E-36 1.1E-40 355.6 18.2 250 605-876 36-302 (504)
215 3eb0_A Putative uncharacterize 100.0 1.6E-36 5.3E-41 345.5 15.0 259 605-876 7-322 (383)
216 2xrw_A Mitogen-activated prote 100.0 9.8E-36 3.4E-40 337.4 21.3 258 606-876 26-319 (371)
217 1zy4_A Serine/threonine-protei 100.0 1.2E-35 4.3E-40 325.0 21.1 250 605-875 6-283 (303)
218 3pfq_A PKC-B, PKC-beta, protei 100.0 3.5E-36 1.2E-40 366.2 18.2 248 604-875 340-597 (674)
219 1blx_A Cyclin-dependent kinase 100.0 4.6E-36 1.6E-40 332.9 17.5 260 606-875 12-296 (326)
220 2i6l_A Mitogen-activated prote 100.0 2.9E-36 1E-40 332.9 15.6 259 606-875 12-305 (320)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.2E-36 7.6E-41 334.4 14.2 258 604-884 32-304 (319)
222 2x7f_A TRAF2 and NCK-interacti 100.0 9E-36 3.1E-40 330.7 19.1 249 606-875 25-286 (326)
223 2pml_X PFPK7, Ser/Thr protein 100.0 6.5E-36 2.2E-40 335.0 18.1 258 605-875 31-322 (348)
224 3kvw_A DYRK2, dual specificity 100.0 1.2E-35 4E-40 343.4 20.6 199 605-813 97-304 (429)
225 2fst_X Mitogen-activated prote 100.0 1.5E-36 5.1E-41 343.6 12.9 256 605-876 29-312 (367)
226 3an0_A Dual specificity mitoge 100.0 4.8E-36 1.6E-40 335.3 16.5 251 605-875 51-310 (340)
227 3rgf_A Cyclin-dependent kinase 100.0 8.7E-36 3E-40 341.9 18.3 264 607-876 22-334 (405)
228 1q8y_A SR protein kinase; tran 100.0 2.2E-35 7.4E-40 333.8 21.3 271 604-884 18-344 (373)
229 3cek_A Dual specificity protei 100.0 1.7E-35 5.7E-40 326.9 19.8 252 603-876 26-293 (313)
230 1j1b_A Glycogen synthase kinas 100.0 3.8E-36 1.3E-40 346.5 15.2 259 606-876 55-337 (420)
231 3e3p_A Protein kinase, putativ 100.0 3.9E-36 1.3E-40 338.4 13.7 265 603-876 21-315 (360)
232 2wei_A Calmodulin-domain prote 100.0 1.3E-35 4.6E-40 323.5 17.3 253 601-875 18-276 (287)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 7.4E-36 2.5E-40 335.2 15.7 259 606-875 12-305 (353)
234 2vx3_A Dual specificity tyrosi 100.0 4.3E-35 1.5E-39 333.5 21.8 200 605-812 54-262 (382)
235 2eu9_A Dual specificity protei 100.0 1.6E-35 5.6E-40 331.9 17.9 265 601-875 15-333 (355)
236 3coi_A Mitogen-activated prote 100.0 2E-35 6.9E-40 332.2 17.8 254 606-876 25-306 (353)
237 4exu_A Mitogen-activated prote 100.0 3.3E-35 1.1E-39 333.0 19.6 254 606-876 43-324 (371)
238 3aln_A Dual specificity mitoge 100.0 2.4E-35 8.1E-40 327.8 15.7 253 606-875 23-285 (327)
239 3fhr_A MAP kinase-activated pr 100.0 4.7E-35 1.6E-39 327.2 17.9 250 606-875 29-287 (336)
240 2rio_A Serine/threonine-protei 100.0 5.7E-35 1.9E-39 338.2 18.1 247 610-875 20-295 (434)
241 2iwi_A Serine/threonine-protei 100.0 3E-35 1E-39 324.6 13.8 244 601-876 27-284 (312)
242 2dyl_A Dual specificity mitoge 100.0 1.3E-34 4.6E-39 319.8 18.0 251 605-876 25-284 (318)
243 3qa8_A MGC80376 protein; kinas 100.0 5.3E-35 1.8E-39 349.7 15.1 270 605-884 14-311 (676)
244 3a99_A Proto-oncogene serine/t 100.0 3.7E-35 1.3E-39 325.7 12.6 240 604-875 42-293 (320)
245 3p23_A Serine/threonine-protei 100.0 2.7E-34 9.3E-39 332.0 17.1 247 606-875 25-283 (432)
246 3uqc_A Probable conserved tran 100.0 1.6E-33 5.5E-38 307.6 19.9 237 602-885 28-268 (286)
247 2pzi_A Probable serine/threoni 100.0 6.9E-34 2.3E-38 347.6 16.4 241 604-882 79-328 (681)
248 2vuw_A Serine/threonine-protei 100.0 1.7E-33 5.8E-38 314.3 12.6 243 602-874 17-329 (336)
249 3m2w_A MAP kinase-activated pr 100.0 1.6E-32 5.4E-37 301.3 20.0 225 607-876 19-257 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 7.6E-33 2.6E-37 318.3 15.0 238 608-875 81-363 (413)
251 4azs_A Methyltransferase WBDD; 99.9 1.3E-27 4.4E-32 284.9 6.1 187 611-808 240-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.9E-24 1.3E-28 253.5 7.4 183 610-809 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 2.3E-21 7.8E-26 210.8 8.2 141 609-781 94-252 (282)
254 1zth_A RIO1 serine protein kin 99.7 1.3E-17 4.4E-22 178.8 10.1 135 608-757 50-219 (258)
255 1ogq_A PGIP-2, polygalacturona 99.6 4.3E-16 1.5E-20 171.7 10.3 147 368-514 3-161 (313)
256 4ecn_A Leucine-rich repeat pro 99.6 3.1E-15 1.1E-19 185.5 11.0 140 372-513 270-526 (876)
257 4gyi_A RIO2 kinase; protein ki 99.6 1.4E-15 4.7E-20 170.3 5.6 137 607-757 97-265 (397)
258 2wfh_A SLIT homolog 2 protein 99.5 5.2E-14 1.8E-18 143.7 9.9 110 408-519 30-143 (193)
259 4eco_A Uncharacterized protein 99.5 2.4E-14 8.3E-19 173.2 8.5 138 372-513 31-284 (636)
260 1w8a_A SLIT protein; signaling 99.5 8.9E-14 3E-18 141.8 8.8 123 396-518 8-142 (192)
261 3rgz_A Protein brassinosteroid 99.4 3.7E-14 1.3E-18 175.5 5.2 111 408-518 631-743 (768)
262 2o6r_A Variable lymphocyte rec 99.4 4.4E-13 1.5E-17 134.5 10.0 126 391-518 3-140 (177)
263 2v70_A SLIT-2, SLIT homolog 2 99.4 6.8E-13 2.3E-17 138.4 9.1 112 408-519 56-170 (220)
264 2v9t_B SLIT homolog 2 protein 99.3 1.3E-12 4.5E-17 136.1 9.6 111 409-519 56-169 (220)
265 3e6j_A Variable lymphocyte rec 99.3 2E-12 6.9E-17 135.6 10.0 116 397-513 20-146 (229)
266 3g39_A Variable lymphocyte rec 99.3 2.8E-12 9.5E-17 128.1 8.9 109 402-518 6-118 (170)
267 3rgz_A Protein brassinosteroid 99.3 1.4E-12 4.7E-17 161.4 7.6 124 370-498 11-169 (768)
268 4fcg_A Uncharacterized protein 99.3 5.3E-13 1.8E-17 148.0 3.5 140 370-513 26-194 (328)
269 2r9u_A Variable lymphocyte rec 99.3 4E-12 1.4E-16 127.4 9.4 109 402-518 9-121 (174)
270 3e6j_A Variable lymphocyte rec 99.3 7E-12 2.4E-16 131.5 9.9 109 408-518 63-175 (229)
271 3g39_A Variable lymphocyte rec 99.3 5.5E-12 1.9E-16 125.9 8.0 102 396-497 9-119 (170)
272 2o6s_A Variable lymphocyte rec 99.3 9.9E-12 3.4E-16 128.0 10.0 122 391-514 3-136 (208)
273 2v9t_B SLIT homolog 2 protein 99.2 8.3E-12 2.8E-16 130.1 8.7 120 396-515 11-141 (220)
274 1p9a_G Platelet glycoprotein I 99.2 1.2E-11 4.2E-16 134.5 10.1 110 408-518 99-211 (290)
275 2ifg_A High affinity nerve gro 99.2 6.8E-12 2.3E-16 139.8 7.1 104 413-519 12-120 (347)
276 3m19_A Variable lymphocyte rec 99.2 2.5E-11 8.5E-16 129.0 10.2 110 408-517 82-194 (251)
277 1ogq_A PGIP-2, polygalacturona 99.2 2.5E-12 8.4E-17 141.6 2.3 108 411-518 199-307 (313)
278 2v70_A SLIT-2, SLIT homolog 2 99.2 1.5E-11 5E-16 128.2 8.1 120 396-515 11-142 (220)
279 2o6s_A Variable lymphocyte rec 99.2 4.9E-11 1.7E-15 122.7 10.5 110 408-518 51-164 (208)
280 2r9u_A Variable lymphocyte rec 99.2 3.3E-11 1.1E-15 120.8 8.6 87 408-494 32-119 (174)
281 3rfs_A Internalin B, repeat mo 99.2 4.9E-11 1.7E-15 128.3 10.6 112 408-519 108-222 (272)
282 1w8a_A SLIT protein; signaling 99.2 1.6E-11 5.6E-16 124.9 6.4 91 408-498 53-144 (192)
283 2o6q_A Variable lymphocyte rec 99.2 4E-11 1.4E-15 128.8 8.9 107 408-514 36-145 (270)
284 4g8a_A TOLL-like receptor 4; l 99.2 2E-11 7E-16 146.6 7.1 106 408-514 51-160 (635)
285 4g8a_A TOLL-like receptor 4; l 99.2 3E-11 1E-15 145.2 8.4 113 407-519 467-584 (635)
286 2ell_A Acidic leucine-rich nuc 99.1 2.9E-11 1E-15 119.9 6.6 105 408-514 23-132 (168)
287 2o6q_A Variable lymphocyte rec 99.1 7.8E-11 2.7E-15 126.5 10.2 111 408-519 108-222 (270)
288 2je0_A Acidic leucine-rich nuc 99.1 2.3E-11 7.9E-16 118.1 4.7 106 408-514 16-125 (149)
289 4fcg_A Uncharacterized protein 99.1 5.2E-11 1.8E-15 131.9 7.9 108 408-516 182-291 (328)
290 3m19_A Variable lymphocyte rec 99.1 1E-10 3.4E-15 124.3 9.7 106 408-514 34-143 (251)
291 2jwp_A Malectin, MGC80075; sug 99.1 3.1E-10 1E-14 113.5 12.3 141 25-171 7-171 (174)
292 2z81_A CD282 antigen, TOLL-lik 99.1 4.6E-11 1.6E-15 141.5 7.4 117 396-513 4-134 (549)
293 3tm0_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.4E-15 124.0 10.0 141 607-756 16-213 (263)
294 3v47_A TOLL-like receptor 5B a 99.1 5.2E-11 1.8E-15 137.6 5.8 125 391-515 2-142 (455)
295 2xot_A Amphoterin-induced prot 99.1 1.2E-10 4E-15 130.8 8.2 120 396-515 18-149 (361)
296 3v47_A TOLL-like receptor 5B a 99.1 1.1E-10 3.9E-15 134.7 8.0 111 408-519 298-412 (455)
297 1ozn_A Reticulon 4 receptor; N 99.1 1E-10 3.6E-15 126.4 6.9 111 408-519 128-242 (285)
298 2z66_A Variable lymphocyte rec 99.1 1.3E-10 4.3E-15 127.0 7.3 112 408-519 149-265 (306)
299 2z80_A TOLL-like receptor 2, v 99.1 1.3E-10 4.3E-15 129.9 7.3 117 395-513 29-160 (353)
300 2ifg_A High affinity nerve gro 99.1 1.6E-10 5.5E-15 128.7 8.1 103 392-495 4-118 (347)
301 2z62_A TOLL-like receptor 4, v 99.0 2.1E-10 7.2E-15 123.4 7.9 107 408-514 27-136 (276)
302 3zyj_A Leucine-rich repeat-con 99.0 1.9E-10 6.5E-15 132.6 7.8 109 408-519 184-296 (440)
303 1p9a_G Platelet glycoprotein I 99.0 4.5E-10 1.5E-14 122.1 9.8 107 407-515 75-185 (290)
304 2xwt_C Thyrotropin receptor; s 99.0 1.6E-10 5.5E-15 121.6 5.9 125 388-514 3-142 (239)
305 3vq2_A TLR4, TOLL-like recepto 99.0 1.5E-10 5.1E-15 138.9 6.2 111 408-519 447-562 (606)
306 3rfs_A Internalin B, repeat mo 99.0 5.4E-10 1.8E-14 120.1 9.8 108 408-515 84-194 (272)
307 3zyi_A Leucine-rich repeat-con 99.0 3.3E-10 1.1E-14 131.0 8.8 106 408-514 74-183 (452)
308 2xot_A Amphoterin-induced prot 99.0 3.2E-10 1.1E-14 127.2 7.9 108 409-518 88-205 (361)
309 2o6r_A Variable lymphocyte rec 99.0 3.7E-10 1.3E-14 113.0 7.4 90 408-497 51-141 (177)
310 1nd4_A Aminoglycoside 3'-phosp 99.0 5.6E-10 1.9E-14 118.4 9.1 131 612-756 26-214 (264)
311 4eco_A Uncharacterized protein 99.0 4.6E-10 1.6E-14 135.7 9.2 108 408-517 487-602 (636)
312 3zyi_A Leucine-rich repeat-con 99.0 3E-10 1E-14 131.5 7.1 109 408-519 195-307 (452)
313 1dce_A Protein (RAB geranylger 99.0 3.9E-10 1.3E-14 134.1 7.6 100 411-514 443-545 (567)
314 4b8c_D Glucose-repressible alc 99.0 5E-10 1.7E-14 137.2 8.5 105 408-515 223-329 (727)
315 3vq2_A TLR4, TOLL-like recepto 99.0 5.5E-10 1.9E-14 133.9 8.6 107 408-514 31-140 (606)
316 1ozn_A Reticulon 4 receptor; N 99.0 9.6E-10 3.3E-14 118.8 9.5 107 408-514 31-141 (285)
317 2wfh_A SLIT homolog 2 protein 99.0 5.4E-10 1.9E-14 113.8 6.9 88 408-495 53-141 (193)
318 2id5_A Lingo-1, leucine rich r 99.0 7.7E-10 2.6E-14 128.7 8.9 117 398-514 13-140 (477)
319 4ecn_A Leucine-rich repeat pro 99.0 7.6E-10 2.6E-14 137.3 9.0 106 409-516 728-841 (876)
320 3t6q_A CD180 antigen; protein- 98.9 6.1E-10 2.1E-14 133.5 7.6 107 408-514 32-141 (606)
321 1dce_A Protein (RAB geranylger 98.9 5.5E-10 1.9E-14 132.8 6.8 88 408-497 462-550 (567)
322 3zyj_A Leucine-rich repeat-con 98.9 1.1E-09 3.7E-14 126.3 9.0 106 408-514 63-172 (440)
323 3oja_B Anopheles plasmodium-re 98.9 1.3E-09 4.3E-14 130.9 9.6 104 410-513 76-182 (597)
324 4ezg_A Putative uncharacterize 98.9 6.9E-10 2.4E-14 113.2 6.1 104 408-513 87-192 (197)
325 1a9n_A U2A', U2A'; complex (nu 98.9 8E-10 2.7E-14 110.5 6.0 104 408-515 18-126 (176)
326 1xku_A Decorin; proteoglycan, 98.9 1.4E-09 5E-14 120.0 8.5 106 409-516 192-307 (330)
327 2z63_A TOLL-like receptor 4, v 98.9 8.5E-10 2.9E-14 131.1 6.8 112 408-519 420-535 (570)
328 3oja_A Leucine-rich immune mol 98.9 7E-10 2.4E-14 129.7 5.8 107 408-517 143-252 (487)
329 3o6n_A APL1; leucine-rich repe 98.9 5.7E-10 2E-14 126.3 4.8 108 408-517 247-354 (390)
330 2id5_A Lingo-1, leucine rich r 98.9 8E-10 2.7E-14 128.6 6.1 110 409-519 224-337 (477)
331 3j0a_A TOLL-like receptor 5; m 98.9 1.1E-09 3.9E-14 136.7 7.7 107 408-514 23-135 (844)
332 2z62_A TOLL-like receptor 4, v 98.9 2E-09 6.9E-14 115.6 8.4 105 409-513 52-160 (276)
333 3t6q_A CD180 antigen; protein- 98.9 9.9E-10 3.4E-14 131.7 6.4 111 408-519 448-564 (606)
334 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 1.8E-09 6.1E-14 128.5 8.5 104 408-514 51-158 (562)
335 4b8c_D Glucose-repressible alc 98.9 5.4E-10 1.8E-14 136.9 4.1 93 408-502 246-338 (727)
336 1ziw_A TOLL-like receptor 3; i 98.9 2.2E-09 7.4E-14 130.7 9.2 106 408-513 24-132 (680)
337 1wwl_A Monocyte differentiatio 98.9 5.5E-10 1.9E-14 122.6 3.5 107 408-514 94-213 (312)
338 2ell_A Acidic leucine-rich nuc 98.9 1.3E-09 4.4E-14 107.9 5.5 83 409-493 49-133 (168)
339 2ft3_A Biglycan; proteoglycan, 98.9 1.9E-09 6.4E-14 119.3 7.3 106 409-516 193-308 (332)
340 1a9n_A U2A', U2A'; complex (nu 98.9 6.3E-10 2.2E-14 111.3 2.9 87 409-499 42-131 (176)
341 2ft3_A Biglycan; proteoglycan, 98.9 2.8E-09 9.4E-14 117.9 8.4 115 396-514 33-159 (332)
342 2je0_A Acidic leucine-rich nuc 98.9 6.7E-10 2.3E-14 107.7 2.7 88 407-496 40-129 (149)
343 3j0a_A TOLL-like receptor 5; m 98.8 1.1E-09 3.7E-14 136.9 5.2 108 408-518 450-563 (844)
344 3o53_A Protein LRIM1, AGAP0063 98.8 1.7E-09 5.9E-14 118.9 5.8 107 408-517 143-252 (317)
345 3a79_B TLR6, VLRB.59, TOLL-lik 98.8 3.4E-09 1.1E-13 126.1 8.6 107 409-519 403-514 (562)
346 3oja_B Anopheles plasmodium-re 98.8 4.6E-09 1.6E-13 125.9 9.8 106 408-514 98-204 (597)
347 2z66_A Variable lymphocyte rec 98.8 2.4E-09 8.2E-14 116.8 6.5 108 408-515 125-236 (306)
348 3dxp_A Putative acyl-COA dehyd 98.8 7.3E-09 2.5E-13 115.9 10.4 142 610-757 43-249 (359)
349 1xku_A Decorin; proteoglycan, 98.8 4.9E-09 1.7E-13 115.7 8.2 116 396-514 31-157 (330)
350 3o6n_A APL1; leucine-rich repe 98.8 8E-09 2.7E-13 116.8 9.7 105 408-513 92-197 (390)
351 4ezg_A Putative uncharacterize 98.8 3.3E-09 1.1E-13 108.1 5.8 102 409-513 44-147 (197)
352 2z7x_B TOLL-like receptor 1, v 98.8 2.8E-09 9.4E-14 125.4 5.5 108 407-514 322-433 (520)
353 2z7x_B TOLL-like receptor 1, v 98.8 2.4E-09 8.3E-14 125.9 4.7 103 409-514 21-127 (520)
354 4glp_A Monocyte differentiatio 98.8 2.5E-09 8.4E-14 117.2 4.2 107 408-515 168-285 (310)
355 2z81_A CD282 antigen, TOLL-lik 98.8 5.4E-09 1.8E-13 123.7 6.6 107 408-514 49-160 (549)
356 1ziw_A TOLL-like receptor 3; i 98.7 9.4E-09 3.2E-13 125.0 8.6 106 409-514 73-183 (680)
357 4ay9_X Follicle-stimulating ho 98.7 1.2E-08 3.9E-13 113.9 8.2 104 395-499 8-122 (350)
358 3sg8_A APH(2'')-ID; antibiotic 98.7 4.1E-09 1.4E-13 115.2 4.3 183 611-809 26-288 (304)
359 2xwt_C Thyrotropin receptor; s 98.7 5.8E-09 2E-13 109.5 5.3 103 409-513 80-190 (239)
360 2z63_A TOLL-like receptor 4, v 98.7 1.2E-08 4.2E-13 121.0 8.4 91 409-499 76-168 (570)
361 1wwl_A Monocyte differentiatio 98.7 2.1E-09 7.2E-14 117.9 1.6 106 408-514 120-240 (312)
362 3oja_A Leucine-rich immune mol 98.7 5.7E-09 2E-13 121.9 5.1 106 407-515 118-227 (487)
363 4glp_A Monocyte differentiatio 98.7 6.5E-09 2.2E-13 113.8 5.0 85 410-494 92-183 (310)
364 3cvr_A Invasion plasmid antige 98.7 6.2E-09 2.1E-13 123.4 5.1 109 390-513 40-151 (571)
365 2z80_A TOLL-like receptor 2, v 98.7 1.2E-08 3.9E-13 113.9 6.7 105 408-514 75-186 (353)
366 1h6u_A Internalin H; cell adhe 98.7 1.5E-08 5.2E-13 110.9 5.8 104 408-516 128-231 (308)
367 4fmz_A Internalin; leucine ric 98.6 1.7E-08 5.9E-13 112.0 5.5 103 408-513 242-344 (347)
368 1xeu_A Internalin C; cellular 98.6 4.5E-08 1.6E-12 104.6 8.3 101 408-515 62-163 (263)
369 1h6t_A Internalin B; cell adhe 98.6 2.7E-08 9.4E-13 107.9 6.7 101 408-515 111-213 (291)
370 1h6t_A Internalin B; cell adhe 98.6 4.2E-08 1.4E-12 106.5 8.0 102 408-514 89-190 (291)
371 1m9s_A Internalin B; cell inva 98.6 4.7E-08 1.6E-12 116.9 8.0 100 408-514 108-209 (605)
372 1h6u_A Internalin H; cell adhe 98.6 4.9E-08 1.7E-12 106.8 7.5 103 408-515 106-208 (308)
373 1xeu_A Internalin C; cellular 98.6 6.5E-08 2.2E-12 103.3 8.2 100 408-515 40-141 (263)
374 1m9s_A Internalin B; cell inva 98.6 3.9E-08 1.3E-12 117.6 7.1 100 409-513 87-186 (605)
375 1ds9_A Outer arm dynein; leuci 98.6 9.7E-10 3.3E-14 112.2 -6.0 103 408-515 47-153 (198)
376 1ds9_A Outer arm dynein; leuci 98.6 1.5E-09 5.1E-14 110.7 -5.3 103 409-515 18-128 (198)
377 3o53_A Protein LRIM1, AGAP0063 98.6 3.9E-08 1.3E-12 108.0 5.6 105 408-515 119-227 (317)
378 3cvr_A Invasion plasmid antige 98.5 9E-08 3.1E-12 113.4 8.6 96 409-516 140-244 (571)
379 1o6v_A Internalin A; bacterial 98.5 6.4E-08 2.2E-12 112.2 6.2 104 408-516 286-389 (466)
380 1o6v_A Internalin A; bacterial 98.5 1.2E-07 4E-12 110.0 7.3 98 410-512 244-341 (466)
381 2jwp_A Malectin, MGC80075; sug 98.5 1.7E-07 5.9E-12 93.5 7.0 152 189-361 7-170 (174)
382 3bz5_A Internalin-J, INLJ; leu 98.5 2E-07 6.9E-12 107.8 8.3 56 410-470 192-247 (457)
383 3bz5_A Internalin-J, INLJ; leu 98.5 2.4E-07 8.3E-12 107.2 8.9 95 409-512 64-158 (457)
384 4fmz_A Internalin; leucine ric 98.4 1.9E-07 6.5E-12 103.5 6.4 104 408-516 220-325 (347)
385 1jl5_A Outer protein YOPM; leu 98.4 4.3E-07 1.5E-11 105.0 9.2 97 409-514 131-227 (454)
386 3r70_A Aminoglycoside phosphot 98.4 9E-07 3.1E-11 97.3 11.2 134 610-758 42-239 (320)
387 1jl5_A Outer protein YOPM; leu 98.4 1.9E-07 6.7E-12 107.9 6.1 85 409-500 317-418 (454)
388 3g06_A SSPH2 (leucine-rich rep 98.3 2.1E-07 7E-12 111.6 4.7 84 409-500 221-304 (622)
389 4ay9_X Follicle-stimulating ho 98.3 2.2E-07 7.6E-12 103.5 4.2 104 403-514 7-116 (350)
390 2ca6_A RAN GTPase-activating p 98.3 3.9E-08 1.3E-12 111.0 -2.4 85 410-494 160-258 (386)
391 4gkh_A Aminoglycoside 3'-phosp 98.3 2.5E-06 8.7E-11 90.9 12.0 136 611-756 30-223 (272)
392 3g06_A SSPH2 (leucine-rich rep 98.3 7.6E-07 2.6E-11 106.7 8.5 95 409-515 201-297 (622)
393 3d1u_A Putative fructosamine-3 98.3 2.4E-06 8.2E-11 92.4 11.3 75 610-688 20-97 (288)
394 2ca6_A RAN GTPase-activating p 98.3 4E-08 1.4E-12 110.9 -2.9 108 409-516 187-317 (386)
395 3ovc_A Hygromycin-B 4-O-kinase 98.3 1.7E-06 5.9E-11 96.8 9.7 74 610-689 46-122 (362)
396 3tdw_A Gentamicin resistance p 98.2 5E-06 1.7E-10 90.7 12.6 135 611-756 25-224 (306)
397 3goz_A Leucine-rich repeat-con 98.2 1.4E-07 4.7E-12 105.6 -0.2 105 409-513 22-149 (362)
398 2ast_B S-phase kinase-associat 98.2 1.2E-07 4E-12 104.6 -1.4 104 409-513 70-179 (336)
399 3rw6_A Nuclear RNA export fact 98.2 4.5E-07 1.5E-11 96.5 2.9 77 409-486 170-257 (267)
400 3ats_A Putative uncharacterize 98.1 5.4E-06 1.8E-10 92.3 8.3 80 611-690 26-122 (357)
401 2ast_B S-phase kinase-associat 98.1 4.7E-07 1.6E-11 99.7 -0.6 112 397-514 38-154 (336)
402 3goz_A Leucine-rich repeat-con 98.0 4.8E-07 1.7E-11 101.2 -0.9 102 413-514 2-121 (362)
403 3rw6_A Nuclear RNA export fact 98.0 6.9E-07 2.4E-11 95.1 -0.7 83 414-498 148-238 (267)
404 2olc_A MTR kinase, methylthior 97.7 7.4E-05 2.5E-09 84.4 9.8 75 610-686 35-120 (397)
405 2q83_A YTAA protein; 2635576, 97.7 9.2E-05 3.1E-09 81.3 10.4 140 611-755 38-251 (346)
406 1z7x_W Ribonuclease inhibitor; 97.7 8.4E-07 2.9E-11 102.2 -6.7 105 409-513 256-381 (461)
407 1z7x_W Ribonuclease inhibitor; 97.6 2.1E-06 7E-11 98.9 -4.5 106 409-514 284-410 (461)
408 3sb4_A Hypothetical leucine ri 97.6 3.9E-05 1.3E-09 84.3 5.0 91 409-502 226-318 (329)
409 3jr1_A Putative fructosamine-3 97.5 0.00034 1.2E-08 76.3 11.4 137 611-752 42-232 (312)
410 2pyw_A Uncharacterized protein 97.5 0.0001 3.5E-09 84.0 7.4 79 725-804 231-312 (420)
411 3f7w_A Putative fructosamine-3 97.5 0.00023 8E-09 76.5 9.9 74 610-687 20-96 (288)
412 3un9_A NLR family member X1; l 97.4 8.6E-06 2.9E-10 91.4 -3.7 84 410-493 156-252 (372)
413 3un9_A NLR family member X1; l 97.3 8.7E-06 3E-10 91.4 -4.3 61 433-493 155-224 (372)
414 3csv_A Aminoglycoside phosphot 97.0 0.0028 9.6E-08 69.4 11.7 142 611-757 24-218 (333)
415 3sb4_A Hypothetical leucine ri 97.0 0.00037 1.3E-08 76.5 4.5 37 409-446 101-137 (329)
416 1nw1_A Choline kinase (49.2 KD 97.0 0.0013 4.4E-08 75.1 8.6 71 611-687 79-158 (429)
417 3ogk_B Coronatine-insensitive 96.9 5.7E-05 1.9E-09 89.8 -3.2 105 409-513 403-524 (592)
418 1io0_A Tropomodulin; LRR prote 96.9 7.1E-05 2.4E-09 75.1 -2.2 85 409-493 36-136 (185)
419 3dxq_A Choline/ethanolamine ki 96.9 0.0015 5.3E-08 70.5 8.3 139 610-757 23-203 (301)
420 2ppq_A HSK, HK, homoserine kin 96.9 0.0049 1.7E-07 66.9 11.9 143 611-756 28-217 (322)
421 1zyl_A Hypothetical protein YI 96.8 0.0058 2E-07 66.6 12.0 141 612-756 33-223 (328)
422 1io0_A Tropomodulin; LRR prote 96.7 7.7E-05 2.6E-09 74.9 -3.6 85 409-493 65-164 (185)
423 3feg_A Choline/ethanolamine ki 96.7 0.0037 1.3E-07 69.9 9.3 141 611-756 56-254 (379)
424 3rfe_A Platelet glycoprotein I 96.6 0.002 6.7E-08 60.6 5.1 55 413-469 12-68 (130)
425 3c5i_A Choline kinase; choline 96.5 0.0041 1.4E-07 69.2 8.0 72 611-687 39-120 (369)
426 2p1m_B Transport inhibitor res 96.5 0.00028 9.6E-09 83.7 -1.8 102 409-512 105-221 (594)
427 3ogk_B Coronatine-insensitive 96.5 0.00074 2.5E-08 80.1 1.7 78 410-488 165-251 (592)
428 2qg7_A Ethanolamine kinase PV0 96.4 0.0094 3.2E-07 68.4 10.7 73 611-688 114-188 (458)
429 3i1a_A Spectinomycin phosphotr 96.3 0.013 4.4E-07 64.5 10.8 68 614-688 32-108 (339)
430 2p1m_B Transport inhibitor res 96.3 0.00022 7.6E-09 84.6 -4.3 105 409-514 397-518 (594)
431 2yle_A Protein spire homolog 1 96.1 0.064 2.2E-06 54.4 13.2 103 686-807 33-135 (229)
432 3f2s_A CK, chetk-alpha, cholin 96.0 0.02 6.8E-07 64.3 10.2 142 611-756 58-280 (401)
433 3e4g_A ATP synthase subunit S, 95.8 0.0011 3.7E-08 65.6 -1.3 83 409-491 61-150 (176)
434 2ra8_A Uncharacterized protein 95.7 0.0013 4.4E-08 73.3 -0.9 86 409-494 193-293 (362)
435 3rfe_A Platelet glycoprotein I 95.7 0.0091 3.1E-07 56.0 4.9 49 437-487 12-62 (130)
436 2ra8_A Uncharacterized protein 95.6 0.001 3.6E-08 74.0 -2.4 103 408-513 171-290 (362)
437 4fdw_A Leucine rich hypothetic 94.9 0.022 7.4E-07 64.2 5.6 100 410-513 249-356 (401)
438 4fdw_A Leucine rich hypothetic 94.6 0.034 1.1E-06 62.7 6.2 90 409-502 271-366 (401)
439 3mes_A Choline kinase; malaria 94.2 0.13 4.3E-06 58.3 9.8 140 611-756 76-291 (424)
440 3g15_A CK, chetk-alpha, cholin 91.5 0.53 1.8E-05 52.7 9.9 30 727-756 245-280 (401)
441 1pgv_A TMD-1, tropomodulin TMD 90.7 0.026 8.8E-07 56.7 -1.9 83 409-491 41-137 (197)
442 4h09_A Hypothetical leucine ri 87.8 0.51 1.7E-05 52.1 5.7 87 410-501 264-352 (379)
443 4fs7_A Uncharacterized protein 86.8 0.51 1.7E-05 52.5 5.0 77 410-490 298-376 (394)
444 4gt6_A Cell surface protein; l 86.5 0.92 3.1E-05 50.4 7.0 86 410-501 266-353 (394)
445 3e4g_A ATP synthase subunit S, 85.5 0.12 4.1E-06 50.9 -0.9 70 424-493 52-128 (176)
446 4h09_A Hypothetical leucine ri 83.3 1.2 4E-05 49.1 5.8 88 410-502 241-330 (379)
447 4gt6_A Cell surface protein; l 82.1 1.1 3.6E-05 49.9 4.9 80 409-492 288-369 (394)
448 1pgv_A TMD-1, tropomodulin TMD 80.6 0.11 3.6E-06 52.3 -3.6 83 409-491 70-168 (197)
449 4fs7_A Uncharacterized protein 75.9 1.4 4.9E-05 48.8 3.5 72 409-485 320-393 (394)
450 4ann_A ESSB; membrane protein, 72.9 8.4 0.00029 38.8 7.8 115 659-809 43-158 (215)
451 3cxl_A N-chimerin; SH2, RHO-GA 68.0 0.61 2.1E-05 53.3 -2.1 59 609-670 146-213 (463)
452 4ano_A ESSB; membrane protein, 62.2 13 0.00045 37.5 6.7 114 659-809 48-163 (219)
453 2jwa_A Receptor tyrosine-prote 48.6 2.4 8.1E-05 31.1 -1.0 11 526-536 12-22 (44)
454 2w3j_A Carbohydrate binding mo 25.9 3.4E+02 0.012 24.9 9.7 91 80-175 38-133 (145)
455 3ls8_A Phosphatidylinositol 3- 23.1 6.4E+02 0.022 29.2 13.1 84 664-755 402-501 (614)
456 1nrp_R Receptor based peptide 22.6 29 0.00098 21.3 0.9 16 200-215 6-21 (26)
457 1cja_A Protein (actin-fragmin 21.3 3.7E+02 0.013 28.7 9.8 137 610-756 74-237 (342)
458 1nro_R Receptor based peptide 20.4 37 0.0013 21.0 1.0 16 200-215 6-21 (27)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.4e-50 Score=444.58 Aligned_cols=260 Identities=26% Similarity=0.426 Sum_probs=208.8
Q ss_pred HHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~L 678 (927)
..+.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34456789999999999999875 478899999987766677889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcE
Q 002410 679 VYEYMHNGTLRDRLHGSV------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRA 746 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~------------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~ 746 (927)
|||||++|+|.++++... ...++++.+++.|+.|||+||+|||+ ++|+||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence 999999999999997543 13469999999999999999999998 999999999999999999999
Q ss_pred EEeeccccccccccc-cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHH
Q 002410 747 KVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 824 (927)
Q Consensus 747 kL~DFGla~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~ 824 (927)
||+|||+++...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||...... .+...
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~---~~~~~-- 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT---EAIDC-- 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH---HHHHH--
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH---HHHHH--
Confidence 999999998764432 223344569999999999999999999999999999999999 89999743321 22222
Q ss_pred HhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 825 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 825 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
+..+.... .+...+..+.+|+.+||+.||++|||++||++.|+.+.+.
T Consensus 273 --i~~g~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 --ITQGRELE---------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp --HHHTCCCC---------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --HHcCCCCC---------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 22222111 1112334788999999999999999999999999988764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-50 Score=442.45 Aligned_cols=261 Identities=28% Similarity=0.457 Sum_probs=215.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
...+.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 345567899999999999999874 47789999998776667788999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEE
Q 002410 678 LVYEYMHNGTLRDRLHGSV----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 747 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~k 747 (927)
||||||++|+|.++|+... ....+++.+++.|+.|||+||+|||+ ++|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEE
Confidence 9999999999999997532 24579999999999999999999998 9999999999999999999999
Q ss_pred Eeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHH
Q 002410 748 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 825 (927)
Q Consensus 748 L~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 825 (927)
|+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..... ..+..
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~---- 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIE---- 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHHH----
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH----
Confidence 999999987544322 22333468999999999999999999999999999999999 8999974332 12222
Q ss_pred hhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 826 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 826 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
.+..+.... .+...+..+.+|+.+||+.||++|||++||++.|+++.+.
T Consensus 242 ~i~~~~~~~---------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 CITQGRVLQ---------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCC---------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 222222211 1122334788999999999999999999999999987654
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.6e-50 Score=442.47 Aligned_cols=264 Identities=24% Similarity=0.414 Sum_probs=215.9
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeec
Q 002410 600 PELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEE 672 (927)
Q Consensus 600 ~el~~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~ 672 (927)
.|+...+++|.++||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+
T Consensus 21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 4455566778999999999999999873 467899999976433 345789999999999999999999999999
Q ss_pred CceEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccc
Q 002410 673 EHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 739 (927)
Q Consensus 673 ~~~~~LV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NIL 739 (927)
++..+||||||++|+|.++|..... ...+++.+++.|+.|||+||+|||+ ++||||||||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NIL 177 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVL 177 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceE
Confidence 9999999999999999999964321 2468999999999999999999999 99999999999999
Q ss_pred ccCCCcEEEeeccccccccccc-cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchh
Q 002410 740 LDINMRAKVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 817 (927)
Q Consensus 740 ld~~~~~kL~DFGla~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~ 817 (927)
|++++.+||+|||+++...... ........||+.|||||++.++.++.++|||||||++|||+| |+.||..... .
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~ 254 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---Q 254 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---H
T ss_pred ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---H
Confidence 9999999999999998764432 223344568999999999999999999999999999999999 8999974432 2
Q ss_pred hHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 818 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 818 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
.+.+ .+..+.... .+...+..+.+|+.+||+.||++|||++||++.|+....
T Consensus 255 ~~~~----~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 255 DVVE----MIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp HHHH----HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred HHHH----HHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 2222 222232211 112234578899999999999999999999999986543
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-49 Score=429.80 Aligned_cols=259 Identities=31% Similarity=0.511 Sum_probs=203.3
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..+.+.++||+|+||+||+|++++ .||||+++.. .....+.|.+|+++|++++|||||++++++.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 345678999999999999999763 6999998743 33456789999999999999999999999865 568999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc-
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL- 761 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~- 761 (927)
|++|+|.++|+.. ...+++.+++.|+.|||+||+|||+ ++||||||||+||||++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred CCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 9999999999743 4579999999999999999999998 999999999999999999999999999998764322
Q ss_pred cccccccccCCCccCCCccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 762 THISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~---~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
........||+.|||||++.+ ..++.++|||||||++|||+||+.||...... ..+.. .+..+.. .|
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~----~~~~~~~----~p 257 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIF----MVGRGYA----SP 257 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHH----HHHTTCC----CC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHH----HHhcCCC----CC
Confidence 223344579999999999853 46899999999999999999999999743321 11111 2222211 11
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
.+ .......+..+.+|+.+||+.||++|||++||++.|+.+..
T Consensus 258 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred Cc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11 11122334578899999999999999999999999987653
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.3e-48 Score=428.00 Aligned_cols=260 Identities=24% Similarity=0.262 Sum_probs=209.8
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecCC
Q 002410 607 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 685 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~~ 685 (927)
+.+.++||+|+||.||+|+++ +|+.||||+++.... ..+|+.+|++++|||||++++++.+++..+||||||+|
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 455788999999999999986 589999999975422 24799999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC-cEEEeeccccccccccccc-
Q 002410 686 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEEDLTH- 763 (927)
Q Consensus 686 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~-~~kL~DFGla~~~~~~~~~- 763 (927)
|+|.++|+. ...+++.++..++.||+.||+|||+ ++|+||||||+||||+.++ ++||+|||+|+........
T Consensus 135 g~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 135 GSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999984 4579999999999999999999998 9999999999999999987 6999999999876543221
Q ss_pred ---cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 764 ---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 764 ---~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
......||+.|||||++.+..++.++|||||||++|||+||+.||......... ..+ ........
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~i---~~~~~~~~------ 276 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC---LKI---ASEPPPIR------ 276 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH---HHH---HHSCCGGG------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH---HHH---HcCCCCch------
Confidence 122356999999999999999999999999999999999999999754433211 111 11111000
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccCCCCcc
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKF 891 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~~~~~~ 891 (927)
..+......+.+++.+||+.||++|||++|+++.|.+++........+|
T Consensus 277 --~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw 325 (336)
T 4g3f_A 277 --EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPW 325 (336)
T ss_dssp --GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCS
T ss_pred --hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCC
Confidence 1112223468899999999999999999999999998887655544444
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.3e-48 Score=428.78 Aligned_cols=250 Identities=26% Similarity=0.380 Sum_probs=202.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
.|++.+.||+|+||+||+|+++ +|+.||||++... .....+.+.+|+++|++++|||||++++++.+++..||||||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 4778899999999999999986 6999999999754 234457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
|+||+|.++|... ....+++.+++.|+.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+|+.......
T Consensus 105 ~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 105 CEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999753 34567899999999999999999998 9999999999999999999999999999987654322
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccC
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 842 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 842 (927)
......||+.|||||++.+..|+.++|||||||++|||+||+.||...+.. +...... .+.... +..
T Consensus 181 -~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~-~~~~~~-----~~~ 247 (350)
T 4b9d_A 181 -LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKII-SGSFPP-----VSL 247 (350)
T ss_dssp -HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHH-HTCCCC-----CCT
T ss_pred -cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHH-cCCCCC-----CCc
Confidence 223456999999999999999999999999999999999999999744321 1112222 222211 111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 843 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 843 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.....+.+|+.+||+.||++|||++|+++.
T Consensus 248 ----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 248 ----HYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 123468899999999999999999999863
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.4e-48 Score=428.57 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=206.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.|++.++||+|+||+||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 3666789999999999999987 699999999976555556678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 764 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~ 764 (927)
||+|.+++.. ..+++.++..++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+|+........
T Consensus 155 gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~- 226 (346)
T 4fih_A 155 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 226 (346)
T ss_dssp TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-
T ss_pred CCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-
Confidence 9999999973 459999999999999999999999 99999999999999999999999999999876544332
Q ss_pred ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCC
Q 002410 765 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 844 (927)
Q Consensus 765 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 844 (927)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .....+ ..+.....-.
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i----~~~~~~~~~~------- 292 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKMI----RDNLPPRLKN------- 292 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHH----HHSSCCCCSC-------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHH----HcCCCCCCCc-------
Confidence 33457999999999999999999999999999999999999999743321 122211 1111111100
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 845 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 845 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.......+.+|+.+||+.||++|||++|+++
T Consensus 293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1122346889999999999999999999876
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4e-47 Score=413.77 Aligned_cols=244 Identities=29% Similarity=0.435 Sum_probs=197.1
Q ss_pred hhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeec----CceEEEEE
Q 002410 608 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 680 (927)
Q Consensus 608 ~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~----~~~~~LV~ 680 (927)
++.++||+|+||+||+|.+. +++.||+|++... .....+.|.+|+++|++++|||||++++++.+ ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999987 5889999998653 23445779999999999999999999999864 45689999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcccccC-CCcEEEeeccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDI-NMRAKVSDFGLSRQA 757 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~--ivH~DLkp~NILld~-~~~~kL~DFGla~~~ 757 (927)
|||++|+|.+++.. ...+++..+..|+.||+.||+|||+ ++ |+||||||+||||+. ++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999984 4679999999999999999999998 66 999999999999984 799999999999864
Q ss_pred cccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
... ......||+.|||||++.+ .++.++|||||||++|||+||+.||..... ...+. ..+..+......+
T Consensus 183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~~----~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIY----RRVTSGVKPASFD 252 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHH----HHHTTTCCCGGGG
T ss_pred CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHHH----HHHHcCCCCCCCC
Confidence 332 2334579999999999875 699999999999999999999999963322 11111 2222222111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+ .. ..++.+|+.+||+.||++|||++|+++
T Consensus 253 ~----~~----~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 K----VA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G----CC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c----cC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 11 235789999999999999999999986
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-47 Score=419.69 Aligned_cols=268 Identities=26% Similarity=0.365 Sum_probs=202.1
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCc----eEEEEEEe
Q 002410 607 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYEY 682 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~----~~~LV~E~ 682 (927)
+.+.++||+|+||+||+|+++ |+.||||+++... .....+..|+..+.+++|||||+++++|.+++ ..+|||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 456789999999999999985 8999999997532 22223345666667889999999999997653 57999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG-----CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~-----~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
|++|+|.++|+. ..+++..+.+++.|+++||+|||+. ++++|+||||||+||||+.++++||+|||+|+..
T Consensus 83 ~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999973 4689999999999999999999972 1349999999999999999999999999999876
Q ss_pred cccccc---cccccccCCCccCCCccCCC------CCCcchhHHHHHHHHHHHHhCCCCCCcccccch--------hhHH
Q 002410 758 EEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIV 820 (927)
Q Consensus 758 ~~~~~~---~~~~~~gt~~Y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~--------~~l~ 820 (927)
...... ......||+.|||||++.+. .++.++|||||||++|||+||+.||........ ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 12234699999999998754 467899999999999999999887753322110 0011
Q ss_pred HHHHHhhhcCCeeeeccccccCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 821 HWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 821 ~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
+.+...+..+.. +|.+... ...+.+..+.+|+.+||+.||++||||+||++.|+++.+.+
T Consensus 239 ~~~~~~~~~~~~----rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcccC----CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 112222222211 2222211 13356678899999999999999999999999999887643
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-47 Score=429.68 Aligned_cols=267 Identities=26% Similarity=0.412 Sum_probs=216.3
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECC------CcEEEEEEccCccc-hhHHHHHHHHHHHHhcCC-Cceeeeeeeeec
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHH-RNLVPLIGYCEE 672 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~~------g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~H-pnIv~l~~~~~~ 672 (927)
|+....+++.++||+|+||+||+|++.. ++.||||+++.... ...+.|.+|+++|++++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 4555677889999999999999998753 36899999976543 345789999999999965 899999999966
Q ss_pred -CceEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcc
Q 002410 673 -EHQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 738 (927)
Q Consensus 673 -~~~~~LV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NI 738 (927)
++..++|||||++|+|.++|+... ....+++.+++.++.|||+||+|||+ ++||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccce
Confidence 456899999999999999997532 13458999999999999999999999 9999999999999
Q ss_pred cccCCCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccch
Q 002410 739 LLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 816 (927)
Q Consensus 739 Lld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~ 816 (927)
|+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||......+
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999999976544332 2334568999999999999999999999999999999998 999997443321
Q ss_pred hhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 817 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 817 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
.+. ..+..+..... +.....++.+++.+||+.||++|||++||++.|+++++...
T Consensus 296 -~~~----~~i~~g~~~~~---------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 296 -EFC----RRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp -HHH----HHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred -HHH----HHHHcCCCCCC---------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 122 22222221111 11223468899999999999999999999999999987543
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.2e-47 Score=430.26 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=207.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.|++.++||+|+||.||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||+
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~ 231 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC
Confidence 3667789999999999999987 699999999976555556778999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 764 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~ 764 (927)
||+|.++++. ..+++.++..|+.||+.||+|||+ ++|+||||||+||||+.+|.+||+|||+|+........
T Consensus 232 gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~- 303 (423)
T 4fie_A 232 GGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 303 (423)
T ss_dssp TEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-
T ss_pred CCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-
Confidence 9999999973 458999999999999999999999 99999999999999999999999999999876544332
Q ss_pred ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCC
Q 002410 765 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 844 (927)
Q Consensus 765 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 844 (927)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .....+ ..+.....-.
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~~i----~~~~~~~~~~------- 369 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL---KAMKMI----RDNLPPRLKN------- 369 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHH----HHSCCCCCSC-------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHH----HcCCCCCCcc-------
Confidence 33456999999999999999999999999999999999999999743321 122211 1111111100
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 845 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 845 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.......+.+|+.+||+.||++|||++|+++
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0112246789999999999999999999876
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.5e-47 Score=419.48 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=206.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4788999999999999999986 68999999997532 2345679999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
||+||+|.+++.. .+.+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 113 y~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 113 YAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred cCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999984 4679999999999999999999999 999999999999999999999999999999865432
Q ss_pred -cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 -THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 -~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
.......+||+.|||||++.+..++.++||||+||++|||++|+.||...+.. .+.. . +..+.. .+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---~~~~---~-i~~~~~------~~ 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG---LIFA---K-IIKLEY------DF 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---H-HHHTCC------CC
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HHcCCC------CC
Confidence 22344567999999999999999999999999999999999999999744321 1111 1 112221 11
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIV 874 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl 874 (927)
.... ..++.+|+.+||+.||++|||++|++
T Consensus 254 p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PEKF----FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CTTC----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred Cccc----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1112 23678999999999999999999874
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.2e-46 Score=404.60 Aligned_cols=244 Identities=25% Similarity=0.383 Sum_probs=190.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 5778899999999999999976 69999999997542 2234679999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+ +|+|.+++.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+|+......
T Consensus 94 y~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred CC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99 6899999974 4679999999999999999999999 999999999999999999999999999998764432
Q ss_pred cccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
......||+.|||||++.+..+ +.++||||+||++|||+||+.||...+.. .+.+ .+..+.. .+
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~---~~~~----~i~~~~~------~~ 231 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP---VLFK----NISNGVY------TL 231 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCC------CC
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCC------CC
Confidence 2234569999999999988776 58999999999999999999999743321 1111 1222221 11
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.... ...+.+|+.+||+.||++|||++|+++
T Consensus 232 p~~~----s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCC----CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1111 236789999999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.4e-46 Score=411.64 Aligned_cols=246 Identities=26% Similarity=0.329 Sum_probs=194.9
Q ss_pred HHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~----~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
.|++.+.||+|+||+||+|+.. .++.||||+++... ......+.+|+++|++++|||||++++++.+++..++|
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4778899999999999999863 47899999997542 22334688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
||||+||+|.+++.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp ECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999984 4579999999999999999999999 9999999999999999999999999999987543
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 839 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 839 (927)
... ......||+.|||||++.+..++.++||||+||++|||+||+.||...+..+ +.. . +..+.. .
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~---~~~---~-i~~~~~------~ 244 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TMT---M-ILKAKL------G 244 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH---H-HHHCCC------C
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH---HHH---H-HHcCCC------C
Confidence 322 2234569999999999999999999999999999999999999997443221 111 1 111211 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 875 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~-----~eVl~ 875 (927)
+... ....+.+|+.+||+.||++|||+ +|+++
T Consensus 245 ~p~~----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQF----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCTT----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCc----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1111 22367899999999999999984 56553
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.6e-45 Score=401.39 Aligned_cols=249 Identities=23% Similarity=0.358 Sum_probs=188.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCc---------
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--------- 674 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~--------- 674 (927)
.|++.+.||+|+||+||+|+.+ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 4677899999999999999986 689999999875433 34567999999999999999999999986543
Q ss_pred ---eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeec
Q 002410 675 ---QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDF 751 (927)
Q Consensus 675 ---~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DF 751 (927)
..++|||||++|+|.+++.........++..++.|+.||++||+|||+ ++|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence 368999999999999999854333445667789999999999999999 99999999999999999999999999
Q ss_pred cccccccccccc-----------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHH
Q 002410 752 GLSRQAEEDLTH-----------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 820 (927)
Q Consensus 752 Gla~~~~~~~~~-----------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~ 820 (927)
|+|+........ .....+||+.|||||++.+..++.++|||||||++|||++ ||.... ...
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~ 234 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERV 234 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHH
Confidence 999876543221 1123469999999999999999999999999999999996 775211 111
Q ss_pred HHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 821 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 821 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..+. .+......... ......+.+|+.+||+.||++|||+.|+++
T Consensus 235 ~~~~-~~~~~~~p~~~---------~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLT-DVRNLKFPPLF---------TQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH-HHHTTCCCHHH---------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH-HHhcCCCCCCC---------cccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 11222221111 112234678999999999999999999876
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1e-42 Score=386.37 Aligned_cols=277 Identities=41% Similarity=0.716 Sum_probs=241.8
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecCC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 685 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~~ 685 (927)
.|++.+.||+|+||.||+|++++|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 40 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (321)
T 2qkw_B 40 NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMEN 119 (321)
T ss_dssp CCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTT
T ss_pred ccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCC
Confidence 34557899999999999999988999999999876666778899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc-cc
Q 002410 686 GTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-TH 763 (927)
Q Consensus 686 gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~-~~ 763 (927)
|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 120 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 196 (321)
T 2qkw_B 120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196 (321)
T ss_dssp CBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC
T ss_pred CcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 99999997543 23468999999999999999999998 999999999999999999999999999998654322 22
Q ss_pred cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCC
Q 002410 764 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 843 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 843 (927)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+......|.......+.....+++.+...
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (321)
T 2qkw_B 197 LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276 (321)
T ss_dssp CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTC
T ss_pred cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccc
Confidence 22334589999999999888999999999999999999999999986555555566677666666777777888877777
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 844 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 844 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
...+....+.+++.+||+.||++|||++||++.|+++++..+
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 788889999999999999999999999999999999988654
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7e-43 Score=397.73 Aligned_cols=261 Identities=19% Similarity=0.307 Sum_probs=200.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeec------CceE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 676 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~------~~~~ 676 (927)
.|++.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 4778899999999999999986 69999999997543 3345678899999999999999999998753 4678
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
|||||||+ |+|.+++. ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.
T Consensus 135 ~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 99999996 68999997 35679999999999999999999999 9999999999999999999999999999987
Q ss_pred ccccc---cccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 757 AEEDL---THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 757 ~~~~~---~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
..... ........||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+.... +.........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~---I~~~~g~p~~ 284 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQL---IMMVLGTPSP 284 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHH---HHHHHCCCCG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHH---HHHhcCCCCh
Confidence 64321 2223446799999999998775 569999999999999999999999985543222111 1111110000
Q ss_pred ---eeecc-------ccccC--CCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 833 ---ISIVD-------PVLIG--NVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 833 ---~~~~d-------~~l~~--~~~-----~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
..... ..+.. ..+ ......+.+|+.+||+.||++|||++|+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 00000 000 0112367899999999999999999999864
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.3e-42 Score=384.03 Aligned_cols=287 Identities=39% Similarity=0.699 Sum_probs=241.6
Q ss_pred cChhhHHHHH--HhhcccccccccEEEEEEEECCCcEEEEEEccCccch-hHHHHHHHHHHHHhcCCCceeeeeeeeecC
Q 002410 597 IPLPELEEAT--NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEEE 673 (927)
Q Consensus 597 ~~~~el~~~~--~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~-~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~ 673 (927)
+++.++.... |.+.+.||+|+||.||+|+.++|+.||||++...... ....+.+|++++++++||||+++++++.+.
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 99 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence 4455555444 4457899999999999999888999999999764322 234689999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecc
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 752 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG 752 (927)
+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+..+|+||||||+|||++.++.+||+|||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 179 (326)
T 3uim_A 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179 (326)
T ss_dssp SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS
T ss_pred CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc
Confidence 99999999999999999998654 34459999999999999999999999323399999999999999999999999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccc--cchhhHHHHHHHhhhcC
Q 002410 753 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--GAELNIVHWARSMIKKG 830 (927)
Q Consensus 753 la~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~--~~~~~l~~~~~~~~~~~ 830 (927)
+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+|........
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 3uim_A 180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259 (326)
T ss_dssp SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC
T ss_pred cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch
Confidence 9987765544445555699999999999888899999999999999999999999963322 23445667777777777
Q ss_pred CeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 831 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 831 ~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
......+..+......+....+.+++.+||+.||++|||++||+++|++....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp CSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred hhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 77778888888888888999999999999999999999999999999975443
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.2e-42 Score=385.15 Aligned_cols=194 Identities=25% Similarity=0.416 Sum_probs=167.4
Q ss_pred HHhhcccccccccEEEEEEEEC----CCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~----~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
.|++.++||+|+||+||+|+.+ .++.||||++.... ...++.+|+++|+.+ +||||+++++++.++++.++||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4778899999999999999864 46789999987543 345678999999998 6999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC-CcEEEeeccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQAEE 759 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~-~~~kL~DFGla~~~~~ 759 (927)
||+++|+|.+++. .+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999999985 38899999999999999999999 999999999999999876 7999999999986543
Q ss_pred cccc---------------------------cccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCc
Q 002410 760 DLTH---------------------------ISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSV 810 (927)
Q Consensus 760 ~~~~---------------------------~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~ 810 (927)
.... .....+||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 2111 11234699999999998765 589999999999999999999999963
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.4e-41 Score=405.22 Aligned_cols=250 Identities=21% Similarity=0.341 Sum_probs=207.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.|++.+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+++..++|||||+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 4678899999999999999986 699999999987666667789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC--CcEEEeecccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--MRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~--~~~kL~DFGla~~~~~~~~ 762 (927)
||+|.++|... ...+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.......
T Consensus 238 gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 238 GGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 99999998642 4579999999999999999999999 999999999999999854 8999999999998754322
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccC
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 842 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 842 (927)
.....||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ ... .+...... +.+....
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~---~~~----~i~~~~~~--~~~~~~~ 381 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---TLR----NVKSCDWN--MDDSAFS 381 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHH----HHHTTCCC--CCSGGGT
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HHH----HHHhCCCC--CCccccc
Confidence 234569999999999999999999999999999999999999997443321 111 11111110 1111111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 843 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 843 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.. ...+.+|+.+||+.||++|||++|+++
T Consensus 382 ~~----s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 GI----SEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12 236789999999999999999999987
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.3e-41 Score=400.17 Aligned_cols=247 Identities=22% Similarity=0.273 Sum_probs=197.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHH---HHHHHHHhcCCCceeeeeeeeecCceEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFV---TEVALLSRIHHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~---~E~~~L~~l~HpnIv~l~~~~~~~~~~~L 678 (927)
.|++.++||+|+||+||+|+.+ +|+.||||++.+.. ........ +++.+++.++|||||++++++.+.+..|+
T Consensus 190 df~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lyl 269 (689)
T 3v5w_A 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF 269 (689)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred HeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEE
Confidence 3567899999999999999987 59999999996432 11222333 34666777799999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
|||||+||+|.++|.. ...+++..+..++.||+.||+|||+ ++||||||||+||||+.+|++||+|||+|+...
T Consensus 270 VmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999984 4679999999999999999999998 999999999999999999999999999998765
Q ss_pred ccccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 759 EDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
... ....+||+.|||||++.+ ..|+.++|+||+||++|||++|+.||......+...+... +.....
T Consensus 344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~----i~~~~~----- 411 (689)
T 3v5w_A 344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM----TLTMAV----- 411 (689)
T ss_dssp SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH----HHHCCC-----
T ss_pred CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh----hcCCCC-----
Confidence 432 234579999999999964 5799999999999999999999999975443332222221 111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 875 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----~~eVl~ 875 (927)
.+.... ...+.+|+.+||+.||++|++ ++||++
T Consensus 412 -~~p~~~----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 -ELPDSF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -CCCTTS----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -CCCccC----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 111112 236789999999999999998 677765
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-40 Score=367.83 Aligned_cols=263 Identities=34% Similarity=0.508 Sum_probs=204.6
Q ss_pred HHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
+....|++.+.||+|+||+||+|+.. |+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 33456778899999999999999874 8899999987643 33456799999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~--ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
|||+++|+|.+++........+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999999854323348999999999999999999998 78 999999999999999999999999999865
Q ss_pred cccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.. .....
T Consensus 190 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~---~~~~~~~---~~~~~---- 258 (309)
T 3p86_A 190 ASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ---VVAAVGF---KCKRL---- 258 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH---HHHHHHH---SCCCC----
T ss_pred ccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHh---cCCCC----
Confidence 43322 2233468999999999999999999999999999999999999997433211 1111111 11110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.+ +......+.+++.+||+.||++|||++|+++.|+.++...
T Consensus 259 -~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 259 -EI----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp -CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred -CC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 11 1122246889999999999999999999999999988753
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=366.55 Aligned_cols=258 Identities=25% Similarity=0.380 Sum_probs=212.6
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEec
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
..|.+.+.||+|+||+||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 34667899999999999999986 58999999987766677788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 763 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~ 763 (927)
++|+|.+++... ...+++.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 90 KGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp TTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 999999999853 4679999999999999999999998 99999999999999999999999999999876443221
Q ss_pred c-------------ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccch---hhHHHHHHHhh
Q 002410 764 I-------------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---LNIVHWARSMI 827 (927)
Q Consensus 764 ~-------------~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~---~~l~~~~~~~~ 827 (927)
. .....||+.|+|||++.+..++.++||||||+++|||++|..|+........ .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-- 242 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH--
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc--
Confidence 1 1134689999999999999999999999999999999999999874322211 111111111
Q ss_pred hcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 828 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 828 ~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.. +...+..+.+++.+||+.||++|||++|+++.|+++....
T Consensus 243 -----------~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 243 -----------YC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp -----------TC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------cC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 1111235789999999999999999999999999887654
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.1e-40 Score=372.53 Aligned_cols=264 Identities=24% Similarity=0.450 Sum_probs=214.5
Q ss_pred HHHHhhcccccccccEEEEEEEEC--------CCcEEEEEEccCccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeecC
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 673 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~--------~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~ 673 (927)
...|.+.+.||+|+||.||+|++. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 355677899999999999999863 356799999976533 3457899999999999 899999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 740 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl 740 (927)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence 99999999999999999997543 12458999999999999999999998 999999999999999
Q ss_pred cCCCcEEEeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhh
Q 002410 741 DINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 818 (927)
Q Consensus 741 d~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~ 818 (927)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999986544322 12223446789999999999999999999999999999999 999997543322
Q ss_pred HHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccC
Q 002410 819 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 886 (927)
Q Consensus 819 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~ 886 (927)
+... +..+.... .+......+.+++.+||+.||++||+++|+++.|++++.....
T Consensus 314 ~~~~----~~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 314 LFKL----LKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp HHHH----HHTTCCCC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHH----HhcCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 1111 11221111 1112234788999999999999999999999999999887654
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4e-40 Score=355.68 Aligned_cols=257 Identities=29% Similarity=0.475 Sum_probs=212.7
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
..|++.+.||+|+||.||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 45677899999999999999998899999999986433 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 764 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~ 764 (927)
+++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 99999999743 4568999999999999999999998 999999999999999999999999999998765443333
Q ss_pred ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCC
Q 002410 765 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 843 (927)
Q Consensus 765 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 843 (927)
.....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..... +..+.. ...+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~~----~~~~~~--~~~~----- 229 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVED----ISTGFR--LYKP----- 229 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHH----HHTTCC--CCCC-----
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHHH----HhcCcc--CCCC-----
Confidence 334456788999999998899999999999999999999 99999743321 11111 111110 0111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 844 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 844 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
......+.+++.+||+.||++||+++|+++.|+++.+.
T Consensus 230 --~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 --RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11234688999999999999999999999999998763
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.7e-40 Score=359.51 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=205.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.|++.+.||+|+||+||+|... +|+.||||++........+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 4666789999999999999864 689999999976555566789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 764 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~ 764 (927)
+|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++.........
T Consensus 101 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 172 (297)
T 3fxz_A 101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (297)
T ss_dssp TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence 9999999974 358999999999999999999998 99999999999999999999999999999876543332
Q ss_pred ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCC
Q 002410 765 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 844 (927)
Q Consensus 765 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 844 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. .....+.. ... .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~----~~~~~~~~-~~~-------~ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LY----LIATNGTP-ELQ-------N 238 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HH----HHHHHCSC-CCS-------C
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HH----HHHhCCCC-CCC-------C
Confidence 2344689999999999999999999999999999999999999974332111 11 11111111 000 0
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 845 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 845 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1122346889999999999999999999986
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=367.66 Aligned_cols=264 Identities=26% Similarity=0.494 Sum_probs=213.1
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 675 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~ 675 (927)
++....|++.+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|++++++++||||+++++++.+++.
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 445567788899999999999999985 35569999998653 3445789999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
.++||||+++|+|.++++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999743 4579999999999999999999998 999999999999999999999999999998
Q ss_pred cccccccc--cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 756 QAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 756 ~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..... +..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~----~~~~~~ 272 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVISS----VEEGYR 272 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHHH----HHTTCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHHHH----HHcCCC
Confidence 76543222 1222345778999999998899999999999999999999 99999743321 11111 111111
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
. ..+......+.+++.+||+.||++||+++||++.|++++....
T Consensus 273 ~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 L---------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred C---------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0 0111223478899999999999999999999999999987544
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.7e-40 Score=356.67 Aligned_cols=260 Identities=28% Similarity=0.468 Sum_probs=213.3
Q ss_pred HHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
....|++.+.||+|+||.||+|+++++..||+|+++.... ..+++.+|++++++++||||+++++++.+++..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 3456778899999999999999999888999999976433 346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred cCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999999753 3468999999999999999999998 9999999999999999999999999999987655443
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... . +..+.. ...+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~-~~~~~~--~~~~--- 227 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE---VVL---K-VSQGHR--LYRP--- 227 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HHH---H-HHTTCC--CCCC---
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH---HHH---H-HHcCCC--CCCC---
Confidence 33334456778999999998889999999999999999999 999997433221 111 1 111111 0011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
......+.+++.+||+.||++|||++|+++.|+++...+
T Consensus 228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 ----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp ----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ----CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 111236889999999999999999999999999887644
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.3e-39 Score=355.29 Aligned_cols=280 Identities=36% Similarity=0.586 Sum_probs=225.5
Q ss_pred cccChhhHHHHHHhhc--------ccccccccEEEEEEEECCCcEEEEEEccCcc----chhHHHHHHHHHHHHhcCCCc
Q 002410 595 YFIPLPELEEATNNFC--------KKIGKGSFGSVYYGKMKDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRN 662 (927)
Q Consensus 595 ~~~~~~el~~~~~~~~--------~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~----~~~~~~~~~E~~~L~~l~Hpn 662 (927)
..+++.++...+.+|. +.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 3466788888888874 5699999999999987 58899999986532 234578999999999999999
Q ss_pred eeeeeeeeecCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC
Q 002410 663 LVPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 742 (927)
Q Consensus 663 Iv~l~~~~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~ 742 (927)
|+++++++.+.+..++||||+++|+|.+++........+++..++.++.|++.||+|||+ ++|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence 999999999999999999999999999999765455679999999999999999999998 99999999999999999
Q ss_pred CCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHH
Q 002410 743 NMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 821 (927)
Q Consensus 743 ~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~ 821 (927)
++.+||+|||+++........ ......|++.|+|||.+.+ .++.++||||||+++|||++|+.||........ +..
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHH
Confidence 999999999999875443222 2233468999999998875 588999999999999999999999975443321 111
Q ss_pred HHHHhhh-cCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 822 WARSMIK-KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 822 ~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
+...... ...+...+++.+ ..........+.+++.+||+.||++||+++||++.|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1111111 112233333333 23456677889999999999999999999999999998754
No 30
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.3e-40 Score=367.89 Aligned_cols=267 Identities=25% Similarity=0.332 Sum_probs=208.5
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCc----eEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~----~~~LV~ 680 (927)
..|++.++||+|+||.||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 35667899999999999999987 8999999997542 33455667999999999999999999997643 479999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEecCCCCCcccccCCCcEEEee
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP----------GIIHRDVKSSNILLDINMRAKVSD 750 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~----------~ivH~DLkp~NILld~~~~~kL~D 750 (927)
||+++|+|.++++. ..+++..++.++.|++.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 102 e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 102 AFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred ecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999974 358999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccccccccc-cccccccCCCccCCCccCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhh------
Q 002410 751 FGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN------ 818 (927)
Q Consensus 751 FGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~-----~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~------ 818 (927)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 2223468999999999976 356678999999999999999999997543321111
Q ss_pred ----HHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 819 ----IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 819 ----l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
...+... .........+.... ........+.+++.+||+.||++|||++||++.|+++.+..
T Consensus 255 ~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEV-VVHKKKRPVLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHH-HTTSCCCCCCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhh-hhcccCCCCccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111111 11111111111111 12245567999999999999999999999999999987653
No 31
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9e-40 Score=358.36 Aligned_cols=264 Identities=27% Similarity=0.411 Sum_probs=209.2
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 45677899999999999999976 6899999998543 2334578999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999974 4579999999999999999999998 99999999999999999999999999999876554
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
.........||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .....+... .... ..
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~-~~~~-~~-- 234 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS------IAIKHIQDS-VPNV-TT-- 234 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH------HHHHHHSSC-CCCH-HH--
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhhcc-CCCc-ch--
Confidence 4333444568999999999999999999999999999999999999997433211 111111111 1110 01
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHhhhhhccC
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIEKG 886 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-s~~eVl~~L~~~~~~e~~ 886 (927)
......+..+.+++.+||+.||++|| +++++.+.|++++.....
T Consensus 235 --~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 235 --DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp --HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred --hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 11112234788999999999999999 999999999988765543
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6e-41 Score=367.22 Aligned_cols=267 Identities=28% Similarity=0.457 Sum_probs=209.3
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-----CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeec--Cc
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EH 674 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~-----~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~--~~ 674 (927)
+....|++.+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++.. ..
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 34456778899999999999999852 588999999987766677889999999999999999999999855 34
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccc
Q 002410 675 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 754 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla 754 (927)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred ceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 589999999999999999753 3458999999999999999999998 99999999999999999999999999999
Q ss_pred cccccccc--ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccc---------chhhHHHHH
Q 002410 755 RQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWA 823 (927)
Q Consensus 755 ~~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~---------~~~~l~~~~ 823 (927)
+....... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... .........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 87654322 1222334677899999999889999999999999999999999998733211 001111111
Q ss_pred HHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 824 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 824 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
...+..+... ..+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 242 ~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 242 IELLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhccCcC---------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1222221111 1112233578899999999999999999999999998875
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.5e-40 Score=355.69 Aligned_cols=261 Identities=27% Similarity=0.464 Sum_probs=211.9
Q ss_pred HHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
+....|++.+.||+|+||.||+|.+++++.||+|+++.... ..+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 34456777899999999999999999888999999986533 34678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 100 YMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred ccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 99999999999752 3568999999999999999999998 999999999999999999999999999998765433
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... +..+.. ...
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~~~----~~~~~~--~~~--- 242 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEH----IAQGLR--LYR--- 242 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHH----HHTTCC--CCC---
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHHHH----HhcccC--CCC---
Confidence 333333446788999999998889999999999999999998 99999743321 11111 111110 000
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
+......+.+++.+||+.||++||+++|+++.|++++..+
T Consensus 243 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 243 ----PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp ----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1111246889999999999999999999999999988754
No 34
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.7e-39 Score=356.11 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=201.6
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHh--cCCCceeeeeeeeec----CceEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEE----EHQRIL 678 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~--l~HpnIv~l~~~~~~----~~~~~L 678 (927)
..|++.+.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 4567789999999999999998 5899999998643 34556677777776 789999999998644 356899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcccccCCCcEEEee
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSD 750 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH--------~~~~~~ivH~DLkp~NILld~~~~~kL~D 750 (927)
||||+++|+|.++++ ...+++..++.++.|++.||+||| + ++|+||||||+|||++.++.+||+|
T Consensus 84 v~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECC
T ss_pred ehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEee
Confidence 999999999999996 346999999999999999999999 6 8999999999999999999999999
Q ss_pred cccccccccccccc---ccccccCCCccCCCccCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCcc
Q 002410 751 FGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVE 811 (927)
Q Consensus 751 FGla~~~~~~~~~~---~~~~~gt~~Y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG----------~~Pf~~~ 811 (927)
||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99997654433221 2234689999999999876 456799999999999999999 8888633
Q ss_pred cccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 002410 812 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 880 (927)
Q Consensus 812 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~ 880 (927)
.... ................... .+ ..........+.+++.+||+.||++|||++||++.|+++
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPND-PSFEDMRKVVCVDQQRPNI-PN---RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCSS-CCHHHHHHHHTTSCCCCCC-CG---GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCC-cchhhhhHHHhccCCCCCC-Ch---hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2221 1111111111111111111 11 112234567899999999999999999999999999875
No 35
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.4e-39 Score=356.29 Aligned_cols=247 Identities=25% Similarity=0.395 Sum_probs=204.5
Q ss_pred hhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecCCC
Q 002410 608 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG 686 (927)
Q Consensus 608 ~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~~g 686 (927)
...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 48 ~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 127 (321)
T 2c30_A 48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG 127 (321)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred hccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCC
Confidence 34568999999999999987 69999999998666666778999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccccc
Q 002410 687 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISS 766 (927)
Q Consensus 687 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~ 766 (927)
+|.+++. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......... ..
T Consensus 128 ~L~~~l~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~ 199 (321)
T 2c30_A 128 ALTDIVS----QVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RK 199 (321)
T ss_dssp BHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-BC
T ss_pred CHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc-cc
Confidence 9999987 3468999999999999999999998 99999999999999999999999999999876543222 23
Q ss_pred ccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCH
Q 002410 767 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 846 (927)
Q Consensus 767 ~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 846 (927)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+. ......... ..
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---~~~~~~~----~~~~~~~~~-------~~ 265 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKRLR----DSPPPKLKN-------SH 265 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHHHH----HSSCCCCTT-------GG
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHh----cCCCCCcCc-------cc
Confidence 446899999999999999999999999999999999999999743221 1111111 111111100 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 847 ESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 847 ~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.....+.+++.+||+.||++|||++|+++.
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 123468899999999999999999999863
No 36
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=364.25 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=196.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 34667899999999999999975 68999999987643 23446789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 90 ~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 90 CPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999974 4569999999999999999999998 9999999999999999999999999999987654433
Q ss_pred ccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .... . +..+... +.
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~---~~~~---~-i~~~~~~------~p 230 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM---ALYK---K-IMRGKYD------VP 230 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---H-HHHTCCC------CC
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH---HHHH---H-HHcCCCC------CC
Confidence 33445568999999999988775 89999999999999999999999743321 1111 1 1111110 11
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
. .....+.+++.+||+.||++|||++|+++.
T Consensus 231 ~----~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 K----WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C----CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1 112357789999999999999999999874
No 37
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.2e-39 Score=361.20 Aligned_cols=246 Identities=25% Similarity=0.409 Sum_probs=203.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
.|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence 4667899999999999999984 7999999998654 234457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 96 ASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999974 4568999999999999999999998 999999999999999999999999999998754432
Q ss_pred ccccccccCCCccCCCccCCCCCC-cchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLT-EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s-~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||....... +.. .+..+... +
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~----~i~~~~~~------~- 233 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE---LRE----RVLRGKYR------I- 233 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCCCC------C-
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH---HHH----HHHhCCCC------C-
Confidence 23345699999999999887764 89999999999999999999997443221 111 11112110 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+......+.+++.+||+.||++|||++|+++.
T Consensus 234 ---p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 ---PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ---CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ---CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11122367899999999999999999999864
No 38
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=369.16 Aligned_cols=273 Identities=24% Similarity=0.435 Sum_probs=218.8
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC--------CCcEEEEEEccCccc-hhHHHHHHHHHHHHhc-CCCceeeeeeee
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYC 670 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~--------~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l-~HpnIv~l~~~~ 670 (927)
++....+.+.+.||+|+||.||+|+.. .++.||||+++.... ...+++.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 444567778899999999999999863 245799999976533 3457899999999999 899999999999
Q ss_pred ecCceEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 002410 671 EEEHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 737 (927)
Q Consensus 671 ~~~~~~~LV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~N 737 (927)
..++..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ ++|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcce
Confidence 999999999999999999999975431 2469999999999999999999998 899999999999
Q ss_pred ccccCCCcEEEeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccc
Q 002410 738 ILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGA 815 (927)
Q Consensus 738 ILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~ 815 (927)
||++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~- 300 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 300 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999987654322 22233457889999999999999999999999999999999 99999743321
Q ss_pred hhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccCCCCccc
Q 002410 816 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFS 892 (927)
Q Consensus 816 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~~~~~~s 892 (927)
.+.+ .+..+..... .......+.+++.+||+.||++||+++||++.|++++......+....
T Consensus 301 --~~~~----~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 301 --ELFK----LLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp --HHHH----HHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred --HHHH----HHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1222 1222211111 111234688999999999999999999999999999988766555543
No 39
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=352.00 Aligned_cols=273 Identities=22% Similarity=0.312 Sum_probs=214.2
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCc--eEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~--~~~LV~E 681 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 4567899999999999999987 48999999997543 234577889999999999999999999987655 7899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc----cCCCcEEEeeccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 757 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl----d~~~~~kL~DFGla~~~ 757 (927)
|+++|+|.+++........+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999999865445559999999999999999999998 999999999999999 78888999999999876
Q ss_pred cccccccccccccCCCccCCCccC--------CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-hhhHHHHHHHhhh
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYG--------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA-ELNIVHWARSMIK 828 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~--------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~-~~~l~~~~~~~~~ 828 (927)
..... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... .......+.....
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 54332 22345899999999885 5788999999999999999999999997433321 1122221111111
Q ss_pred cCCeeeec-----------cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 829 KGDVISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 829 ~~~~~~~~-----------d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
........ +..............+.+++.+||+.||++|||++|+++...+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 11111100 00111234556777899999999999999999999999999876654
No 40
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.1e-39 Score=370.08 Aligned_cols=263 Identities=27% Similarity=0.493 Sum_probs=202.2
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC----CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 675 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~ 675 (927)
++....+.+.+.||+|+||.||+|+++ ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp BCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 334456777899999999999999875 57789999997643 3445789999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
.++||||+++|+|.++++.. ...+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999743 4569999999999999999999998 899999999999999999999999999998
Q ss_pred ccccccccc--ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 756 QAEEDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 756 ~~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
......... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+... +..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~---~~~~~----i~~~~~ 268 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ---DVIKA----VDEGYR 268 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH---HHHHH----HHTTEE
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCC
Confidence 765432221 112235678999999998899999999999999999998 99999743321 12221 111111
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
. ......+..+.+++.+||+.||++||+++||++.|++++...
T Consensus 269 ~---------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 L---------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp C---------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred C---------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0 011123347889999999999999999999999999987643
No 41
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-39 Score=370.68 Aligned_cols=259 Identities=29% Similarity=0.433 Sum_probs=210.5
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
...+.+.+.||+|+||.||+|+++ +++.||||+++.... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 345667899999999999999987 689999999876433 334578999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.++++.. +..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 193 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp CCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 99999999999742 3468999999999999999999998 999999999999999999999999999998654322
Q ss_pred cccc-cccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeecccc
Q 002410 762 THIS-SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 839 (927)
Q Consensus 762 ~~~~-~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 839 (927)
.... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||...... ...+ .+..+....
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---~~~~----~~~~~~~~~----- 335 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---QTRE----FVEKGGRLP----- 335 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH---HHHH----HHHTTCCCC-----
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCCC-----
Confidence 1111 12235678999999998899999999999999999998 99999743321 1111 222221111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
.+...+..+.+++.+||+.||++|||++||++.|+++.+.
T Consensus 336 ----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 ----CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1112234688999999999999999999999999988653
No 42
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.6e-39 Score=382.46 Aligned_cols=259 Identities=29% Similarity=0.446 Sum_probs=214.4
Q ss_pred HHHHHhhcccccccccEEEEEEEECC-CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
....+.+.++||+|+||.||+|.++. ++.||||+++... ...++|.+|+++|++++||||++++++|...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 34456778999999999999999885 8899999997643 346789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.++++.. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 297 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp CCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred ccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 99999999999754 34568999999999999999999998 999999999999999999999999999998765433
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
........++..|+|||++.+..++.++|||||||++|||++ |+.||...+... +.+.+ ..+..
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~~----~~~~~-------- 437 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELL----EKDYR-------- 437 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHH----HTTCC--------
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----HcCCC--------
Confidence 332333446789999999998899999999999999999999 999997544322 22211 11111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
...+...+..+.+|+.+||+.||++||+++||++.|+++..
T Consensus 438 -~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 -MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 01112233478899999999999999999999999998764
No 43
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.3e-40 Score=380.58 Aligned_cols=260 Identities=24% Similarity=0.418 Sum_probs=211.8
Q ss_pred HHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
....+++.+.||+|+||.||+|.+++++.||||+++... ...+.|.+|+++|++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 344567789999999999999999989999999998643 34678999999999999999999999987 5678999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++|+|.++++.. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 264 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 264 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred cCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 9999999999743 12367889999999999999999998 8999999999999999999999999999987654322
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.......++..|+|||++....++.++|||||||++|||+| |+.||...... .+...+. .+....
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---~~~~~i~----~~~~~~------- 405 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALE----RGYRMP------- 405 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHH----HTCCCC-------
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH----cCCCCC-------
Confidence 22233346788999999988899999999999999999999 99999743322 1222111 111100
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.+...+..+.+++.+||+.||++|||+++|++.|+++....
T Consensus 406 --~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 406 --RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred --CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 11122347889999999999999999999999999887643
No 44
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.4e-38 Score=348.26 Aligned_cols=264 Identities=16% Similarity=0.191 Sum_probs=212.9
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..|++.+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|+++++++ +|+|++++++++.+....++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 35667899999999999999974 68999999986532 334678899999999 799999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc-----EEEeeccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQA 757 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~-----~kL~DFGla~~~ 757 (927)
+ +++|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +||+|||+++..
T Consensus 88 ~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 88 L-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp C-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred c-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 9 99999999853 4569999999999999999999998 99999999999999987776 999999999876
Q ss_pred cccccc------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCC
Q 002410 758 EEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 831 (927)
Q Consensus 758 ~~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 831 (927)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 543221 22345689999999999999999999999999999999999999986544333332222222111111
Q ss_pred eeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 832 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 832 ~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
... +.. ..+..+.+++.+||+.||++||++++|++.|++++....
T Consensus 242 ~~~-----~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 242 LRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHH-----HHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 111 111 123478899999999999999999999999999987543
No 45
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-39 Score=352.06 Aligned_cols=261 Identities=24% Similarity=0.394 Sum_probs=200.3
Q ss_pred HHHHHHhhcccccccccEEEEEEEECC----CcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~----g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
+....|++.+.||+|+||.||+|.+.. +..||+|+++... ....+.+.+|+.++++++||||+++++++. ++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 334567788999999999999998753 4579999987643 334567999999999999999999999985 4568
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccc
Confidence 8999999999999999753 4568999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
.............+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+ ..+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~i----~~~~~~~- 237 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRI----ENGERLP- 237 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH----HTTCCCC-
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHHH----HcCCCCC-
Confidence 65543333334456789999999988889999999999999999997 999997443322 12211 1111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
. +......+.+++.+||+.||++||+++|+++.|++++..+
T Consensus 238 ----~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 238 ----M----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1 1122346889999999999999999999999999998754
No 46
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=9.6e-39 Score=357.22 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=203.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|+.+ +|+.||+|++++.. ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E 85 (337)
T 1o6l_A 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 85 (337)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence 4567899999999999999987 58999999997532 2345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 86 YANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp CCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999974 4568999999999999999999998 999999999999999999999999999998643322
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+ .... +.. .+.
T Consensus 160 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~---~i~~-~~~------~~p 225 (337)
T 1o6l_A 160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFE---LILM-EEI------RFP 225 (337)
T ss_dssp C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHHH-CCC------CCC
T ss_pred C-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH---HHHH---HHHc-CCC------CCC
Confidence 2 223456899999999999999999999999999999999999999743321 1111 1111 111 111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~eVl~~ 876 (927)
. .....+.+++.+||+.||++|| +++||++.
T Consensus 226 ~----~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 R----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp T----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C----CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1 1224678999999999999999 89999764
No 47
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5e-39 Score=346.09 Aligned_cols=256 Identities=29% Similarity=0.470 Sum_probs=211.2
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
..|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 35667899999999999999998899999999986533 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 764 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~ 764 (927)
+++|.+++... ...+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++..........
T Consensus 87 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 87 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp TCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 99999999753 4568999999999999999999998 999999999999999999999999999998764432222
Q ss_pred ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCC
Q 002410 765 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 843 (927)
Q Consensus 765 ~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 843 (927)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... +..+... ..+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~----i~~~~~~--~~~----- 227 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVED----ISTGFRL--YKP----- 227 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHH----HHTTCCC--CCC-----
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHHH----HhcCCcC--CCC-----
Confidence 233456788999999988889999999999999999999 89999743321 11111 1111110 001
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 844 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 844 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
......+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 228 --~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 228 --RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1123468899999999999999999999999999875
No 48
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.9e-39 Score=353.06 Aligned_cols=261 Identities=21% Similarity=0.288 Sum_probs=200.9
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..|++.++||+|+||+||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 100 (311)
T 3niz_A 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100 (311)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence 34667899999999999999998899999999875432 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
++ |+|.+.+... ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 101 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 101 ME-KDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CS-EEHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CC-CCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 97 4888888743 4568999999999999999999998 9999999999999999999999999999987643322
Q ss_pred ccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCC---eee----
Q 002410 763 HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VIS---- 834 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~---~~~---- 834 (927)
. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+... . +........ ...
T Consensus 175 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~-i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 175 S-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP--K-IFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH--H-HHHHHCCCCTTTSGGGTTS
T ss_pred c-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH--H-HHHHHCCCChHHhhhhhcc
Confidence 2 223458999999999876 568999999999999999999999997544432211 1 111111100 000
Q ss_pred ---------eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 835 ---------IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 835 ---------~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..+.............++.+|+.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000001112246789999999999999999999986
No 49
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.1e-39 Score=351.90 Aligned_cols=263 Identities=29% Similarity=0.445 Sum_probs=218.0
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECC-CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
++....|++.+.||+|+||.||+|.++. ++.||+|++... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 4455667788999999999999999874 889999999754 34467899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||+++++|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 88 TEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 9999999999999754 34668999999999999999999998 8999999999999999999999999999987765
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
..........+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+... ..+.... ...
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~~----~~~------ 230 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEK----DYR------ 230 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHT----TCC------
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhc----cCC------
Confidence 44444444557889999999998899999999999999999999 999997544322 1221111 100
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
..........+.+++.+||+.||++||+++|+++.|+++....
T Consensus 231 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 231 ---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0111122347889999999999999999999999999887643
No 50
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.9e-40 Score=359.18 Aligned_cols=268 Identities=24% Similarity=0.397 Sum_probs=209.0
Q ss_pred hHHHHHHhhcccccccccEEEEEEEE-----CCCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecC-
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE- 673 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~- 673 (927)
.+....|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 33445577789999999999999984 358899999997543 23457789999999999999999999999876
Q ss_pred -ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecc
Q 002410 674 -HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 752 (927)
Q Consensus 674 -~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFG 752 (927)
...++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccc
Confidence 6689999999999999999643 4568999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccc--ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccc--------chhhHHHH
Q 002410 753 LSRQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG--------AELNIVHW 822 (927)
Q Consensus 753 la~~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~--------~~~~l~~~ 822 (927)
++........ .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+...... ........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 9987654332 2233345788899999999889999999999999999999999987522100 00011111
Q ss_pred HHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 823 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 823 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
....+..+... ..+......+.+++.+||+.||++|||++|+++.|+++++
T Consensus 252 ~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 252 LVNTLKEGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHHHHHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHhccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 11112211111 1112233478899999999999999999999999998763
No 51
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=351.96 Aligned_cols=262 Identities=29% Similarity=0.499 Sum_probs=204.0
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
..+++.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 34567899999999999999986 789999998743 345789999999999999999999998874 4789999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc-EEEeeccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-AKVSDFGLSRQAEEDLTH 763 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~-~kL~DFGla~~~~~~~~~ 763 (927)
+|+|.+++........+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||++.......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-- 160 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-- 160 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc--
Confidence 9999999986543345788999999999999999999754478999999999999998886 7999999997654322
Q ss_pred cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCC
Q 002410 764 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 843 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 843 (927)
....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..... . ...+.... ....
T Consensus 161 --~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~---~-~~~~~~~~-----~~~~ 228 (307)
T 2eva_A 161 --TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA-FRIMW---A-VHNGTRPP-----LIKN 228 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH-HHHHH---H-HHTTCCCC-----CBTT
T ss_pred --ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH-HHHHH---H-HhcCCCCC-----cccc
Confidence 22358999999999999999999999999999999999999997432221 11111 1 11111111 1111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccCCCC
Q 002410 844 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQ 889 (927)
Q Consensus 844 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~~~~ 889 (927)
....+.+++.+||+.||++|||++|+++.|+++...-...+.
T Consensus 229 ----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 229 ----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred ----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 224688999999999999999999999999998876544443
No 52
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5e-39 Score=354.62 Aligned_cols=262 Identities=26% Similarity=0.421 Sum_probs=212.9
Q ss_pred HHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 675 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~ 675 (927)
....|.+.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 3455677899999999999999862 45789999997643 3445789999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002410 676 RILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVK 734 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLk 734 (927)
.++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ ++|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 9999999999999999985432 2348999999999999999999998 999999999
Q ss_pred CCcccccCCCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 002410 735 SSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVED 812 (927)
Q Consensus 735 p~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~ 812 (927)
|+||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876443222 2223446788999999988889999999999999999999 999997443
Q ss_pred ccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 813 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 813 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
... +... +..+.... ........+.+++.+||+.||++||+++|+++.|++++..
T Consensus 258 ~~~---~~~~----~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PER---LFNL----LKTGHRME---------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGG---HHHH----HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHH---HHHH----hhcCCcCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 322 1121 11111111 1112234788999999999999999999999999998764
No 53
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.3e-39 Score=355.72 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=201.2
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEec
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
.|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus 8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 87 (323)
T 3tki_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (323)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence 4567899999999999999987 689999999865432 23466889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc-c
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-T 762 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~-~ 762 (927)
++|+|.+++. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 88 ~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 88 SGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999997 35679999999999999999999998 999999999999999999999999999998654322 1
Q ss_pred ccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .....+... .... .+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~----~~~~---~~--- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEK----KTYL---NP--- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHHHTT----CTTS---TT---
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHHhcc----cccC---Cc---
Confidence 22234568999999999977665 789999999999999999999997443321 222222111 1000 00
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.......+.+|+.+||+.||++|||++|+++.
T Consensus 231 ---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01123467899999999999999999999864
No 54
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.3e-39 Score=347.59 Aligned_cols=250 Identities=30% Similarity=0.434 Sum_probs=193.6
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccc----hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS----HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~----~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 34667899999999999999986 89999999875432 23467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---eEecCCCCCcccccC--------CCcEEEe
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG---IIHRDVKSSNILLDI--------NMRAKVS 749 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~---ivH~DLkp~NILld~--------~~~~kL~ 749 (927)
||+++++|.+++. ...+++..++.++.|++.||+|||+ ++ |+||||||+||+++. ++.+||+
T Consensus 86 e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 86 EFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp ECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 9999999999986 4568999999999999999999998 67 999999999999986 7789999
Q ss_pred eccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhc
Q 002410 750 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 829 (927)
Q Consensus 750 DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 829 (927)
|||+++....... ....|++.|+|||.+.+..++.++||||||+++|||++|+.||...+... ... ....
T Consensus 159 Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~---~~~~- 228 (271)
T 3dtc_A 159 DFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA---VAY---GVAM- 228 (271)
T ss_dssp CCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH---HHH---HHHT-
T ss_pred cCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH---hhhc-
Confidence 9999986544322 23458999999999998889999999999999999999999997433211 111 1111
Q ss_pred CCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 002410 830 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 880 (927)
Q Consensus 830 ~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~ 880 (927)
..... ..+......+.+++.+||+.||++|||++|+++.|+++
T Consensus 229 ~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 229 NKLAL--------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp SCCCC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCC--------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11110 11122234788999999999999999999999999864
No 55
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-39 Score=357.97 Aligned_cols=262 Identities=27% Similarity=0.445 Sum_probs=211.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
...|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 345667899999999999999985 348899999986533 3457899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002410 677 ILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKS 735 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp 735 (927)
++||||+++|+|.+++..... ...+++.+++.++.||++||+|||+ ++|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCc
Confidence 999999999999999975321 2578999999999999999999998 9999999999
Q ss_pred CcccccCCCcEEEeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 002410 736 SNILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDF 813 (927)
Q Consensus 736 ~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~ 813 (927)
+|||++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999987543321 22233457889999999988889999999999999999999 9999974332
Q ss_pred cchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 814 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 814 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
. .... .+..+..... +......+.+++.+||+.||++||+++||++.|+++....
T Consensus 283 ~---~~~~----~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 E---EVIY----YVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp H---HHHH----HHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred H---HHHH----HHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1 1111 2222222111 1122346889999999999999999999999999987643
No 56
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.8e-39 Score=363.99 Aligned_cols=264 Identities=27% Similarity=0.429 Sum_probs=210.5
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeecC
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 673 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~ 673 (927)
+....|++.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 34456778899999999999999842 467899999976433 3457799999999999 799999999998775
Q ss_pred c-eEEEEEEecCCCCHHHHhccCCC-------------------------------------------------------
Q 002410 674 H-QRILVYEYMHNGTLRDRLHGSVN------------------------------------------------------- 697 (927)
Q Consensus 674 ~-~~~LV~E~~~~gsL~~~L~~~~~------------------------------------------------------- 697 (927)
+ ..++||||+++|+|.+++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 5 48999999999999999975431
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc-cccccc
Q 002410 698 --------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-HISSVA 768 (927)
Q Consensus 698 --------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~ 768 (927)
...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... ......
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence 1228999999999999999999999 9999999999999999999999999999987543322 223344
Q ss_pred ccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHH
Q 002410 769 RGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIE 847 (927)
Q Consensus 769 ~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 847 (927)
.||+.|+|||++.+..++.++|||||||++|||++ |+.||....... .... .+..+..... +..
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~----~~~~~~~~~~---------~~~ 320 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCR----RLKEGTRMRA---------PDY 320 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHH----HHHHTCCCCC---------CTT
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHHH----HHHcCCCCCC---------CCC
Confidence 57889999999998899999999999999999998 999997443322 1111 1111111111 111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 848 SIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 848 ~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
....+.+++.+||+.||++|||++||+++|++++..
T Consensus 321 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 321 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 223688999999999999999999999999998864
No 57
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.6e-38 Score=359.05 Aligned_cols=255 Identities=23% Similarity=0.318 Sum_probs=207.0
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
......|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 344567888999999999999999986 58999999997542 334567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC---CcEEEeecccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLS 754 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~---~~~kL~DFGla 754 (927)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 99999999999999873 4578999999999999999999998 999999999999999865 45999999999
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+... +..+....
T Consensus 179 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~~~~----i~~~~~~~ 249 (362)
T 2bdw_A 179 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQ----IKAGAYDY 249 (362)
T ss_dssp BCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCCCC
T ss_pred eEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHH----HHhCCCCC
Confidence 87654322 22346899999999999999999999999999999999999999743321 11111 11121110
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
..+ .. ......+.+++.+||+.||++||++.|+++.
T Consensus 250 -~~~-~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 -PSP-EW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -CTT-GG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -Ccc-cc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 00 1123468899999999999999999998764
No 58
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.9e-39 Score=376.13 Aligned_cols=261 Identities=27% Similarity=0.435 Sum_probs=206.9
Q ss_pred HHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
....+++.++||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 344567789999999999999999988899999998643 235689999999999999999999999876 678999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 260 ~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 9999999999743 23468999999999999999999998 9999999999999999999999999999987654332
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .... .+..+...
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~~----~i~~~~~~-------- 400 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD----QVERGYRM-------- 400 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCC--------
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC--------
Confidence 22233446789999999988899999999999999999999 99999743321 1111 11222110
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
..+...+..+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 401 -~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 401 -PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 0112234478899999999999999999999999999876443
No 59
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.3e-39 Score=357.15 Aligned_cols=259 Identities=23% Similarity=0.408 Sum_probs=203.1
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCc----EEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~----~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
....|++.+.||+|+||+||+|++. +++ .||+|.++... ....+.+.+|+.++++++||||+++++++.++. .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 3455677899999999999999975 344 36888886433 344578999999999999999999999998765 7
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++|+||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 8999999999999999853 4578999999999999999999998 8999999999999999999999999999987
Q ss_pred ccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 757 AEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 757 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +... +..+....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~----~~~~~~~~ 239 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI----LEKGERLP 239 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH----HHTTCCCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHH----HHcCCCCC
Confidence 6443222 2223346889999999999999999999999999999999 999997544322 1111 11111100
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
........+.+++.+||+.||++||+++|+++.|+++...
T Consensus 240 ---------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 240 ---------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1112234688999999999999999999999999988754
No 60
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.9e-38 Score=353.47 Aligned_cols=261 Identities=19% Similarity=0.229 Sum_probs=210.2
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEEEec
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
.|++.+.||+|+||.||+|+.. +|+.||||++..... .+.+.+|+++++++ +||||+++++++..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 4567899999999999999974 689999999875422 34688999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc-----EEEeecccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAE 758 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~-----~kL~DFGla~~~~ 758 (927)
+++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++. +||+|||+++...
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 -GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred -CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999999853 4679999999999999999999998 89999999999999998887 9999999998754
Q ss_pred ccccc------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 759 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 759 ~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 43221 123456999999999999999999999999999999999999999855433322222222111111000
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
..+.. ..+ .+.+++.+|++.||.+||++++|++.|+++....
T Consensus 242 -----~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 242 -----EVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -----HHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----HHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 00000 112 7889999999999999999999999999887653
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=352.96 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=205.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch------hHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~------~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
...|.+.+.||+|+||.||+|..+ +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456788999999999999999987 5899999998754321 357799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC----cEEEeecc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 752 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFG 752 (927)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 999999999999999973 4679999999999999999999998 9999999999999998887 89999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 753 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 753 la~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+. ....
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~----~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLANVS----AVNY 234 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHHH----HTCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHHH----hcCC
Confidence 9987643322 233458999999999999999999999999999999999999997433211 111111 1110
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
. ....... .....+.+++.+||+.||++|||++|+++.
T Consensus 235 ~--~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 E--FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp C--CCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred C--cCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000111 112367899999999999999999999873
No 62
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=366.04 Aligned_cols=266 Identities=27% Similarity=0.452 Sum_probs=213.1
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecC
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 673 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~ 673 (927)
++....+++.+.||+|+||.||+|++. +++.||||+++... .....++.+|+.++++++||||+++++++.+.
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 444566778899999999999999854 46789999997543 34556789999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC---cE
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RA 746 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~---~~ 746 (927)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999997543 23468999999999999999999999 9999999999999999555 59
Q ss_pred EEeeccccccccccc-cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHH
Q 002410 747 KVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 824 (927)
Q Consensus 747 kL~DFGla~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~ 824 (927)
||+|||+++...... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .+...
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---~~~~~-- 298 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEF-- 298 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHH--
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH--
Confidence 999999998653322 122233457899999999988899999999999999999998 99999743321 12221
Q ss_pred HhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 825 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 825 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
+..+.... ........+.+++.+||+.||++||+++||++.|+.+.....
T Consensus 299 --i~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 299 --VTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp --HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred --HHcCCCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 11111111 111223468899999999999999999999999998876543
No 63
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.5e-38 Score=351.07 Aligned_cols=265 Identities=31% Similarity=0.500 Sum_probs=205.7
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEE
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~L 678 (927)
++....|.+.++||+|+||.||+|++. ..+|+|+++.. .....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 455567778899999999999999875 36899988753 23455789999999999999999999998764 55789
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||+++++|.+++... ...+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 109 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 99999999999999743 5679999999999999999999998 899999999999999999999999999998654
Q ss_pred cc-ccccccccccCCCccCCCccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 759 ED-LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 759 ~~-~~~~~~~~~gt~~Y~APE~l~---~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
.. .........||+.|+|||++. +..++.++|||||||++|||++|+.||......+ ....... .+...
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~~~~~~~----~~~~~- 256 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMVG----RGYAS- 256 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHH----HTCCC-
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--HHHHHHh----cCCCC-
Confidence 31 122223446899999999985 6678999999999999999999999997433221 1111111 11111
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
+.+ .......+..+.+++.+||+.+|++||++.||++.|+.+....
T Consensus 257 ---~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 257 ---PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ---CCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ---cch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 111 0111122347889999999999999999999999999887643
No 64
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.8e-38 Score=355.66 Aligned_cols=249 Identities=24% Similarity=0.329 Sum_probs=203.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch------hHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~------~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~L 678 (927)
.|++.+.||+|+||.||+|+.+ +|+.||+|+++..... ..+.+.+|+.+|++++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 4667899999999999999987 5899999999754322 34678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC----cEEEeecccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFGLS 754 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFGla 754 (927)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||++
T Consensus 93 v~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 93 ILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999973 5679999999999999999999998 9999999999999998776 7999999999
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
+....... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......+ ... . +..+...
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~---~~~---~-i~~~~~~- 236 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLA---N-ITAVSYD- 236 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHH---H-HHTTCCC-
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHH---H-HHhcCCC-
Confidence 87654322 233469999999999999999999999999999999999999997443211 111 1 1111110
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.++..... ....+.+++.+||..||++|||++|+++
T Consensus 237 -~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111 1236789999999999999999999985
No 65
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.5e-39 Score=355.26 Aligned_cols=264 Identities=26% Similarity=0.423 Sum_probs=197.1
Q ss_pred HHHHHhhcccccccccEEEEEEEECCC----cEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMKDG----KEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~~g----~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
....|++.+.||+|+||.||+|++... ..||||+++.. .....+.+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 345677889999999999999987643 27999999764 344567899999999999999999999999876655
Q ss_pred ------EEEEEecCCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEE
Q 002410 677 ------ILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 747 (927)
Q Consensus 677 ------~LV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~k 747 (927)
++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986432 22368999999999999999999998 9999999999999999999999
Q ss_pred Eeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHH
Q 002410 748 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 825 (927)
Q Consensus 748 L~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 825 (927)
|+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+ .....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~-- 252 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYNYL-- 252 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH--
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHHHH--
Confidence 999999987644322 12223346788999999998899999999999999999999 999997443322 11111
Q ss_pred hhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 826 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 826 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
. .+.... ........+.+++.+||+.||++|||+.|+++.|++++.-..
T Consensus 253 -~-~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 253 -I-GGNRLK---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp -H-TTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred -h-cCCCCC---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 1 111100 111223478899999999999999999999999999987543
No 66
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.1e-38 Score=345.38 Aligned_cols=254 Identities=31% Similarity=0.532 Sum_probs=202.9
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchh-------HHHHHHHHHHHHhcCCCceeeeeeeeecCc
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-------TQQFVTEVALLSRIHHRNLVPLIGYCEEEH 674 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~-------~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~ 674 (927)
....|++.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3355677899999999999999985 68999999986532211 167899999999999999999999997665
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcccccCCCc-----EE
Q 002410 675 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMR-----AK 747 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~--ivH~DLkp~NILld~~~~-----~k 747 (927)
++||||+++|+|.+.+... ...+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++. +|
T Consensus 97 --~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred --eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 6999999999999988743 4579999999999999999999998 78 999999999999988776 99
Q ss_pred EeeccccccccccccccccccccCCCccCCCcc--CCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH
Q 002410 748 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY--GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 825 (927)
Q Consensus 748 L~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l--~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 825 (927)
|+|||+++..... .....||+.|+|||.+ ....++.++|||||||++|||++|+.||........ .......
T Consensus 170 l~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~- 243 (287)
T 4f0f_A 170 VADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINMIR- 243 (287)
T ss_dssp ECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHHHH-
T ss_pred eCCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHHHh-
Confidence 9999999854432 2334689999999998 455678999999999999999999999974443221 1111111
Q ss_pred hhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 002410 826 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 880 (927)
Q Consensus 826 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~ 880 (927)
..+ .. +.+ .......+.+++.+||+.||++||+++|+++.|+++
T Consensus 244 --~~~-~~----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 --EEG-LR----PTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --HSC-CC----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --ccC-CC----CCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111 11 111 112234788999999999999999999999999864
No 67
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.2e-39 Score=362.73 Aligned_cols=269 Identities=25% Similarity=0.372 Sum_probs=211.4
Q ss_pred HHHHhhcccccccccEEEEEEEE-----CCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeee--cCceE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQR 676 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~--~~~~~ 676 (927)
...|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 34567789999999999999985 358899999998776667788999999999999999999999886 55678
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccccee
Confidence 9999999999999999753 3468999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccc--cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccch--------hhHHHHHHHh
Q 002410 757 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIVHWARSM 826 (927)
Q Consensus 757 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~--------~~l~~~~~~~ 826 (927)
....... ......++..|+|||.+.+..++.++|||||||++|||++|+.||........ ..........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6443321 22334578889999999988899999999999999999999999863322100 0000111111
Q ss_pred hhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccC
Q 002410 827 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 886 (927)
Q Consensus 827 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~ 886 (927)
+..+.. ..........+.+++.+||+.||++|||++|+++.|+++......
T Consensus 257 ~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 257 LEEGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp HHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred hhcccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 111111 111223345788999999999999999999999999998775543
No 68
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1e-38 Score=351.90 Aligned_cols=265 Identities=28% Similarity=0.435 Sum_probs=214.3
Q ss_pred HHHHHHhhcccccccccEEEEEEEE------CCCcEEEEEEccCccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeecC
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 673 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~------~~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~ 673 (927)
+....|.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3345677889999999999999985 2467899999976543 3457899999999999 899999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcc
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSVN---------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 738 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~~---------------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NI 738 (927)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ ++|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceE
Confidence 999999999999999999975432 2258999999999999999999998 9999999999999
Q ss_pred cccCCCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccch
Q 002410 739 LLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 816 (927)
Q Consensus 739 Lld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~ 816 (927)
+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 9999999999999999876544322 2223447789999999988899999999999999999999 999997443321
Q ss_pred hhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 817 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 817 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
........ +.. .. ........+.+++.+||+.||++||+++|+++.|++++...
T Consensus 256 -~~~~~~~~----~~~-~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 -KFYKMIKE----GFR-ML--------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp -HHHHHHHH----TCC-CC--------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHhcc----CCC-CC--------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 11111111 110 00 01112347889999999999999999999999999988753
No 69
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.3e-38 Score=370.42 Aligned_cols=253 Identities=30% Similarity=0.489 Sum_probs=207.2
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCc-eEEEEEEec
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-QRILVYEYM 683 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~-~~~LV~E~~ 683 (927)
..+++.+.||+|+||.||+|.++ |+.||||+++... ..+.|.+|+++|++++||||+++++++...+ ..++||||+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 45667899999999999999987 7899999998643 4578999999999999999999999986654 789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 763 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~ 763 (927)
++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 270 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp TTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999854 23457899999999999999999998 999999999999999999999999999998643321
Q ss_pred cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccC
Q 002410 764 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 842 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 842 (927)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+ .... +..+....
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~----i~~~~~~~-------- 406 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPR----VEKGYKMD-------- 406 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHHH----HHTTCCCC--------
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcCCCCC--------
Confidence 12246889999999999999999999999999999998 999997443322 1111 11221111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 843 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 843 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.+...+..+.+++.+||+.||++|||++||++.|+++...+
T Consensus 407 -~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 407 -APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 11223347889999999999999999999999999887643
No 70
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3e-38 Score=360.25 Aligned_cols=269 Identities=19% Similarity=0.271 Sum_probs=204.5
Q ss_pred HHhhccccccc--ccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 606 TNNFCKKIGKG--SFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 606 ~~~~~~~LG~G--~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
.|++.++||+| +||.||+|+.+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 46778999999 99999999987 69999999997543 334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||.+......
T Consensus 106 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 106 SFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp ECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999999754 23568999999999999999999998 99999999999999999999999999988654322
Q ss_pred cc------ccccccccCCCccCCCccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhh----
Q 002410 761 LT------HISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK---- 828 (927)
Q Consensus 761 ~~------~~~~~~~gt~~Y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~---- 828 (927)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ +.........
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLD 259 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC----------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcccc
Confidence 11 11122358899999999987 6799999999999999999999999975433221 1110000000
Q ss_pred c-----C-------------Ceeeec---ccc------ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--HHh
Q 002410 829 K-----G-------------DVISIV---DPV------LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQD 879 (927)
Q Consensus 829 ~-----~-------------~~~~~~---d~~------l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~--L~~ 879 (927)
. . ...... .+. ............+.+|+.+||+.||++|||++|+++. +++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~ 339 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence 0 0 000000 000 0000111223468899999999999999999999865 444
Q ss_pred h
Q 002410 880 S 880 (927)
Q Consensus 880 ~ 880 (927)
+
T Consensus 340 ~ 340 (389)
T 3gni_B 340 I 340 (389)
T ss_dssp C
T ss_pred H
Confidence 3
No 71
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.5e-39 Score=347.45 Aligned_cols=261 Identities=26% Similarity=0.434 Sum_probs=211.9
Q ss_pred HHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
+....|++.+.||+|+||.||+|..++++.||||+++... ...+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 3345677889999999999999999988899999997543 335789999999999999999999999874 45899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 88 YMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp CCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred cCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 99999999999742 12368999999999999999999998 999999999999999999999999999998765443
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... +..+.. ...
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~ 231 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQN----LERGYR-----MVR 231 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHH----HHTTCC-----CCC
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHHH----HhcccC-----CCC
Confidence 333334456789999999988889999999999999999999 99999743321 11111 111111 001
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.......+.+++.+||+.||++||+++++++.|+++....
T Consensus 232 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 232 ----PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 1122347889999999999999999999999999987654
No 72
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.5e-38 Score=351.44 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=198.6
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCc--------
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-------- 674 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~-------- 674 (927)
..|++.+.||+|+||.||+|+++ +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45677899999999999999987 79999999997543 335578999999999999999999999885433
Q ss_pred -------------------------------------------------eEEEEEEecCCCCHHHHhccCCCCCCCCHHH
Q 002410 675 -------------------------------------------------QRILVYEYMHNGTLRDRLHGSVNQKPLDWLT 705 (927)
Q Consensus 675 -------------------------------------------------~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~ 705 (927)
..++||||+++|+|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 3799999999999999998655455567778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc-----------ccccccccCCCc
Q 002410 706 RLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-----------HISSVARGTVGY 774 (927)
Q Consensus 706 ~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~-----------~~~~~~~gt~~Y 774 (927)
++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 99999999999999998 9999999999999999999999999999987654321 112234589999
Q ss_pred cCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHH
Q 002410 775 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAE 854 (927)
Q Consensus 775 ~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 854 (927)
+|||++.+..++.++|||||||++|||++|..|+. ..... . ........... .......+.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~---~-~~~~~~~~~~~---------~~~~~~~~~~ 304 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRI---I-TDVRNLKFPLL---------FTQKYPQEHM 304 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHH---H-HHHHTTCCCHH---------HHHHCHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHH---H-HHhhccCCCcc---------cccCChhHHH
Confidence 99999999999999999999999999999877753 11111 1 11111111110 1122346789
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 002410 855 VAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 855 Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
++.+||+.||++||+++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
No 73
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-38 Score=358.68 Aligned_cols=256 Identities=23% Similarity=0.309 Sum_probs=205.3
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-----chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 675 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-----~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~ 675 (927)
+....|++.+.||+|+||.||+|..+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 44567889999999999999999886 68999999986421 1235779999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc---EEEeec
Q 002410 676 RILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDF 751 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DF 751 (927)
.++||||+++|+|.+.+.... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+||
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecC
Confidence 999999999999988876432 34468999999999999999999998 99999999999999987655 999999
Q ss_pred cccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCC
Q 002410 752 GLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 831 (927)
Q Consensus 752 Gla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 831 (927)
|+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+.. . +..+.
T Consensus 178 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~---~-i~~~~ 248 (351)
T 3c0i_A 178 GVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFE---G-IIKGK 248 (351)
T ss_dssp TTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH----HHHHH---H-HHHTC
T ss_pred cceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH----HHHHH---H-HHcCC
Confidence 99987654322 2233468999999999999999999999999999999999999997432 11111 1 11111
Q ss_pred eeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 832 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 832 ~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.. ..+..... ....+.+++.+||+.||++||++.|+++
T Consensus 249 ~~--~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 YK--MNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CC--CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC--CCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 10 01111111 1246889999999999999999999986
No 74
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.1e-39 Score=348.84 Aligned_cols=256 Identities=22% Similarity=0.396 Sum_probs=205.1
Q ss_pred HHHHHHhhcccccccccEEEEEEEECC-C-------cEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecC
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKD-G-------KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 673 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~-g-------~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~ 673 (927)
+....|.+.+.||+|+||.||+|+... + +.||+|++........+.+.+|++++++++||||+++++++.++
T Consensus 5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 344567788999999999999998763 3 57999999876666778899999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc--------
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-------- 745 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~-------- 745 (927)
+..++||||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccce
Confidence 9999999999999999999853 3448999999999999999999998 99999999999999998887
Q ss_pred EEEeeccccccccccccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH
Q 002410 746 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR 824 (927)
Q Consensus 746 ~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~ 824 (927)
+||+|||++...... ....+++.|+|||.+.+ ..++.++|||||||++|||++|..|+...... ........
T Consensus 160 ~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--~~~~~~~~ 232 (289)
T 4fvq_A 160 IKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--QRKLQFYE 232 (289)
T ss_dssp EEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHHH
T ss_pred eeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--HHHHHHhh
Confidence 999999998765432 12347889999999987 67899999999999999999965544322111 11111111
Q ss_pred HhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 825 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 825 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
......... ...+.+++.+||+.||++|||++|+++.|++++.-.
T Consensus 233 ---~~~~~~~~~------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 233 ---DRHQLPAPK------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ---TTCCCCCCS------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ---ccCCCCCCC------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 111111111 125779999999999999999999999999988743
No 75
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.8e-38 Score=346.67 Aligned_cols=259 Identities=19% Similarity=0.289 Sum_probs=198.6
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCccch--hHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 607 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~--~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
|++.+.||+|+||.||+|+..+|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 5677899999999999999988999999998654322 24678899999999999999999999999999999999997
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 764 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~ 764 (927)
+ +|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 156 (288)
T 1ob3_A 84 Q-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK- 156 (288)
T ss_dssp E-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred C-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc-
Confidence 5 999988743 4568999999999999999999998 99999999999999999999999999999865432221
Q ss_pred ccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcC---Ceee-----e
Q 002410 765 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVIS-----I 835 (927)
Q Consensus 765 ~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~---~~~~-----~ 835 (927)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+.. +....... .... .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD--QLMR-IFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH-HHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-HHHHHCCCChhhchhhhcccc
Confidence 223458999999999876 468999999999999999999999997443221 1111 11111100 0000 0
Q ss_pred cccccc-------CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 836 VDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 836 ~d~~l~-------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.++... ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011000 0111123346789999999999999999999985
No 76
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=357.01 Aligned_cols=267 Identities=27% Similarity=0.420 Sum_probs=210.6
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcc-chhHHHHHHHHHHHHhc-CCCceeeeeeeeec
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE 672 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~ 672 (927)
++....|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 444566778899999999999999962 46689999997543 33457899999999999 89999999999999
Q ss_pred CceEEEEEEecCCCCHHHHhccCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002410 673 EHQRILVYEYMHNGTLRDRLHGSVNQ--------------------KPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRD 732 (927)
Q Consensus 673 ~~~~~LV~E~~~~gsL~~~L~~~~~~--------------------~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~D 732 (927)
.+..++||||+++|+|.+++...... ..+++..++.++.||+.||+|||+ ++|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCC
Confidence 99999999999999999999854321 347999999999999999999998 9999999
Q ss_pred CCCCcccccCCCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCc
Q 002410 733 VKSSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSV 810 (927)
Q Consensus 733 Lkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~ 810 (927)
|||+|||++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543322 2233457889999999988899999999999999999998 9999974
Q ss_pred ccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 811 EDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 811 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
..... ..... +..+... ..+......+.+++.+||+.||++||+++||++.|+.++....
T Consensus 278 ~~~~~--~~~~~----~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 278 IPVDA--NFYKL----IQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCCSH--HHHHH----HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CCcHH--HHHHH----HhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 43321 12221 1111110 0111123478899999999999999999999999999887543
No 77
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=346.10 Aligned_cols=247 Identities=27% Similarity=0.372 Sum_probs=194.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--------------------------hhHHHHHHHHHHHHhc
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------------------------HRTQQFVTEVALLSRI 658 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--------------------------~~~~~~~~E~~~L~~l 658 (927)
.|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 4667899999999999999876 588999999865421 1135688999999999
Q ss_pred CCCceeeeeeeeec--CceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 002410 659 HHRNLVPLIGYCEE--EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 736 (927)
Q Consensus 659 ~HpnIv~l~~~~~~--~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~ 736 (927)
+||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.||+.||+|||+ ++|+||||||+
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 99999999999976 668899999999999988654 4579999999999999999999998 89999999999
Q ss_pred cccccCCCcEEEeeccccccccccccccccccccCCCccCCCccCCCC---CCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 002410 737 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDF 813 (927)
Q Consensus 737 NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---~s~ksDVwSlGvlL~eLltG~~Pf~~~~~ 813 (927)
|||++.++.+||+|||+++........ .....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999876543222 23346899999999997654 47899999999999999999999974322
Q ss_pred cchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 814 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 814 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
. .+.. .+......... . ......+.+++.+||+.||++||+++|+++
T Consensus 246 ~---~~~~----~~~~~~~~~~~----~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 M---CLHS----KIKSQALEFPD----Q----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H---HHHH----HHHHCCCCCCS----S----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H---HHHH----HHhcccCCCCC----c----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 1111 11111111000 0 112246889999999999999999999875
No 78
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.6e-39 Score=356.01 Aligned_cols=261 Identities=25% Similarity=0.388 Sum_probs=208.1
Q ss_pred hhcccccccccEEEEEEEEC-----CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeec--CceEEEE
Q 002410 608 NFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQRILV 679 (927)
Q Consensus 608 ~~~~~LG~G~~G~Vy~a~~~-----~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~--~~~~~LV 679 (927)
++.+.||+|+||.||++.++ +++.||||+++.... ...+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 67899999999999998754 588999999986543 445779999999999999999999999977 4678999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 114 ~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999974 348999999999999999999998 9999999999999999999999999999987654
Q ss_pred ccc--ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc--------hhhHHHHHHHhhhc
Q 002410 760 DLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSMIKK 829 (927)
Q Consensus 760 ~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~--------~~~l~~~~~~~~~~ 829 (927)
... .......++..|+|||.+.+..++.++||||||+++|||++|+.||....... ...........+..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 332 12233457888999999998889999999999999999999999997332110 00001111111221
Q ss_pred CCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 830 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 830 ~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
+.. ..........+.+++.+||+.||++|||++|+++.|+++...-
T Consensus 267 ~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 267 GER---------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccC---------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 111 1112223357889999999999999999999999999887654
No 79
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=353.06 Aligned_cols=250 Identities=19% Similarity=0.304 Sum_probs=204.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.|.+.+.||+|+||.||+|... +++.||+|++... ......+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 4667899999999999999987 5889999998754 3445678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC--CCcEEEeecccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~--~~~~kL~DFGla~~~~~~~~ 762 (927)
+|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++.......
T Consensus 85 g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 85 GLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 99999999742 3568999999999999999999998 99999999999999987 78999999999987654322
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccC
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 842 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 842 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .... +... .++....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~---~i~~-~~~~--~~~~~~~ 228 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIE---NIMN-AEYT--FDEEAFK 228 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH---HHHH-TCCC--CCHHHHT
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH---HHHH---HHHc-CCCC--CChhhhc
Confidence 23345899999999999988999999999999999999999999743321 1111 1111 1110 0000011
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 843 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 843 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
. ....+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~----~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 E----ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp T----SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 12468899999999999999999999874
No 80
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.9e-38 Score=344.75 Aligned_cols=259 Identities=28% Similarity=0.447 Sum_probs=206.3
Q ss_pred HHHhhcccccccccEEEEEEEECC----CcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~----g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
..|.+.+.||+|+||.||+|++.+ +..||+|++.... ....+.+.+|++++++++||||+++++++.++ ..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEE
Confidence 456678999999999999998653 3469999997653 34567899999999999999999999998754 56899
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||+++++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 91 MELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 9999999999999753 4568999999999999999999998 9999999999999999999999999999987655
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
..........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ...... .+.....
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~~----~~~~~~~--- 235 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVLE----KGDRLPK--- 235 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHHH----HTCCCCC---
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHHh----cCCCCCC---
Confidence 43333344457889999999988899999999999999999998 999997433322 111111 1111100
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
.......+.+++.+||+.||++||+++|+++.|+++...+.
T Consensus 236 ------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 236 ------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp ------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 11122468899999999999999999999999999987654
No 81
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=365.04 Aligned_cols=253 Identities=22% Similarity=0.307 Sum_probs=204.7
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
...|++.+.||+|+||.||+|... +|+.+|+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 466888999999999999999876 68999999987543 234567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc---CCCcEEEeeccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 757 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld---~~~~~kL~DFGla~~~ 757 (927)
||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||++...
T Consensus 90 E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 90 DLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999874 4569999999999999999999998 9999999999999998 4678999999999876
Q ss_pred cccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
...... .....||+.|+|||++.+..++.++||||+||++|+|++|..||...+.. .+.. .+..+... ...
T Consensus 164 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---~~~~----~i~~~~~~-~~~ 234 (444)
T 3soa_A 164 EGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---RLYQ----QIKAGAYD-FPS 234 (444)
T ss_dssp CTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH----HHHHTCCC-CCT
T ss_pred cCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH---HHHH----HHHhCCCC-CCc
Confidence 543322 23356999999999999999999999999999999999999999743321 1111 11122111 001
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+ ... .....+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~-~~~----~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 P-EWD----TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp T-TTT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred c-ccc----cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 001 123468899999999999999999999873
No 82
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.8e-38 Score=354.27 Aligned_cols=266 Identities=24% Similarity=0.447 Sum_probs=213.5
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC--------CCcEEEEEEccCccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeee
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCE 671 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~--------~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~ 671 (927)
+....|.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 34456778899999999999999874 467899999976533 4457799999999999 8999999999999
Q ss_pred cCceEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcc
Q 002410 672 EEHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 738 (927)
Q Consensus 672 ~~~~~~LV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NI 738 (927)
+.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ ++|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceE
Confidence 99999999999999999999985431 2348999999999999999999998 9999999999999
Q ss_pred cccCCCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccch
Q 002410 739 LLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 816 (927)
Q Consensus 739 Lld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~ 816 (927)
+++.++.+||+|||+++........ ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 9999999999999999876543221 1223346788999999988889999999999999999999 99999743321
Q ss_pred hhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccC
Q 002410 817 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 886 (927)
Q Consensus 817 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~ 886 (927)
.+... +..+.... ........+.+++.+||+.||++||+++|+++.|++++.....
T Consensus 267 -~~~~~----~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 267 -ELFKL----LKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp -HHHHH----HHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -HHHHH----HhcCCCCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 11111 11111111 1112234688999999999999999999999999999887654
No 83
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.7e-38 Score=345.78 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=198.7
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEec
Q 002410 607 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
|++.++||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 567889999999999999986 58999999997543 234477889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 763 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~ 763 (927)
++ +|.+.+.. ....+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 84 DQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp SE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred CC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 75 56555543 24679999999999999999999999 8999999999999999999999999999987643322
Q ss_pred cccccccCCCccCCCccCCCC-CCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhc---CCeeeec---
Q 002410 764 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK---GDVISIV--- 836 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l~~~~-~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~---~~~~~~~--- 836 (927)
......||+.|+|||++.+.. ++.++|||||||++|||++|..||..... .. .....+...... .......
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-~~-~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-VD-DQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-HH-HHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-HH-HHHHHHHHHhCCCChhhhhhhcccc
Confidence 223345899999999997765 79999999999999999999888642221 11 111111111110 0000000
Q ss_pred c---------ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 837 D---------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 837 d---------~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+ ..............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000111223446789999999999999999999986
No 84
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-38 Score=347.89 Aligned_cols=269 Identities=25% Similarity=0.377 Sum_probs=205.5
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhc--CCCceeeeeeeeecC----
Q 002410 600 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI--HHRNLVPLIGYCEEE---- 673 (927)
Q Consensus 600 ~el~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l--~HpnIv~l~~~~~~~---- 673 (927)
.+.....|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++..+ +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 4455678888999999999999999987 899999998643 234455566666655 899999999998776
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC--------CeEecCCCCCcccccCCCc
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP--------GIIHRDVKSSNILLDINMR 745 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~--------~ivH~DLkp~NILld~~~~ 745 (927)
...++||||+++|+|.++++. ..+++..++.++.|++.||+|||+ + +|+||||||+|||++.++.
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCC
Confidence 789999999999999999973 368999999999999999999997 6 9999999999999999999
Q ss_pred EEEeecccccccccccccc---ccccccCCCccCCCccCCCCCCcc------hhHHHHHHHHHHHHhC----------CC
Q 002410 746 AKVSDFGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQQLTEK------SDVYSFGVVLLELISG----------KK 806 (927)
Q Consensus 746 ~kL~DFGla~~~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~k------sDVwSlGvlL~eLltG----------~~ 806 (927)
+||+|||+++......... .....||+.|+|||++.+.....+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 9999999997654432221 123468999999999987766655 9999999999999999 66
Q ss_pred CCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 807 PVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 807 Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
||........ .... .................. ........+.+++.+||+.||++|||++||++.|+++.+..
T Consensus 261 p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 261 PYHDLVPSDP-SYED-MREIVCIKKLRPSFPNRW---SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTTSCSSC-CHHH-HHHHHTTSCCCCCCCGGG---GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cHhhhcCCCC-chhh-hHHHHhhhccCccccccc---hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 6653222111 1111 111111111111111110 12256678999999999999999999999999999988754
No 85
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=360.07 Aligned_cols=250 Identities=24% Similarity=0.368 Sum_probs=199.4
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~ 676 (927)
+....|++.+.||+|+||.||+|+.+ +|+.||||++++.. ....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 33455777899999999999999987 58999999997532 23446688999999988 699999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 999999999999999974 4569999999999999999999998 9999999999999999999999999999986
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+ ... .+..
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~---~i~-~~~~---- 241 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---DLFE---AIL-NDEV---- 241 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHH-HCCC----
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---HHHH---HHH-cCCC----
Confidence 43222 2233456999999999999889999999999999999999999999744322 1111 111 1111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCH------HHHHH
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM------QEIVL 875 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~------~eVl~ 875 (927)
.. +......+.+++.+||+.||++||++ +|+++
T Consensus 242 --~~----p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 --VY----PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --CC----CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CC----CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 01 11122367899999999999999998 67765
No 86
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.4e-38 Score=338.97 Aligned_cols=252 Identities=22% Similarity=0.375 Sum_probs=204.1
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecC--ceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~--~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|+++ ++.||||+++... ....+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 45667899999999999999986 8999999997543 34456799999999999999999999999876 7889999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~--ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++ |+||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999853 23468999999999999999999998 78 9999999999999999999999998876532
Q ss_pred ccccccccccccCCCccCCCccCCCCCCc---chhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 759 EDLTHISSVARGTVGYLDPEYYGNQQLTE---KSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~---ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
. ....||+.|+|||.+.+...+. ++|||||||++|||++|+.||....... . .......+..
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~---~~~~~~~~~~--- 229 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME---I---GMKVALEGLR--- 229 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH---H---HHHHHHSCCC---
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH---H---HHHHHhcCCC---
Confidence 2 2235789999999998765544 8999999999999999999997433211 1 1111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
+.. +......+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 230 --~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 --PTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111 11223468899999999999999999999999998754
No 87
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.1e-38 Score=359.13 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=198.4
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV 679 (927)
..|++.++||+|+||.||+|+.+ +++.||+|++++.. ....+.+.+|..+++++ +||||+++++++.+.+..++|
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 34667899999999999999987 57899999997542 22335688899999887 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 132 ~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999974 4579999999999999999999998 9999999999999999999999999999986332
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc--hhhHHHHHHHhhhcCCeeeecc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--ELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d 837 (927)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....+.....+.....
T Consensus 206 ~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----- 279 (396)
T 4dc2_A 206 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----- 279 (396)
T ss_dssp TT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-----
T ss_pred CC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-----
Confidence 22 22334569999999999999999999999999999999999999996433221 11111222222222211
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 870 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 870 (927)
.+ +......+.+|+.+||+.||++||++
T Consensus 280 -~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 -RI----PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -CC----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -CC----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11 11122367899999999999999996
No 88
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.7e-38 Score=351.90 Aligned_cols=249 Identities=24% Similarity=0.318 Sum_probs=180.7
Q ss_pred ccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCceeeeeeeeecCceEEEEEEecCCCCH
Q 002410 611 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 688 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~~~~~~LV~E~~~~gsL 688 (927)
+.||+|+||.||+|.++ +++.||||++... ....+.+|+.++++++ ||||+++++++.+++..++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999986 5899999998643 3466788999999997 99999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC---cEEEeeccccccccccccccc
Q 002410 689 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKVSDFGLSRQAEEDLTHIS 765 (927)
Q Consensus 689 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~---~~kL~DFGla~~~~~~~~~~~ 765 (927)
.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++........ .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-c
Confidence 999984 4679999999999999999999998 9999999999999997765 8999999999865443222 2
Q ss_pred cccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCC
Q 002410 766 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 845 (927)
Q Consensus 766 ~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 845 (927)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..............+..+.... .... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~----~ 240 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF--EGEA----W 240 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC--CSHH----H
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC--Cccc----c
Confidence 334579999999999999999999999999999999999999975443211111111222222222110 0000 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 846 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 846 ~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
......+.+|+.+||+.||++|||++|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 112346889999999999999999999874
No 89
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.5e-38 Score=345.62 Aligned_cols=264 Identities=30% Similarity=0.532 Sum_probs=199.4
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 600 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 600 ~el~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
.|+....|++.++||+|+||.||+|+.. ..||||+++... ....+.+.+|++++++++||||+++++++. .+..+
T Consensus 19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 95 (289)
T 3og7_A 19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLA 95 (289)
T ss_dssp CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccE
Confidence 3555667788899999999999999865 359999987543 344578999999999999999999999764 45689
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 96 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccc
Confidence 999999999999999643 4668999999999999999999998 99999999999999999999999999999865
Q ss_pred cccc-cccccccccCCCccCCCccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCee
Q 002410 758 EEDL-THISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 833 (927)
Q Consensus 758 ~~~~-~~~~~~~~gt~~Y~APE~l~---~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 833 (927)
.... ........||+.|+|||.+. +..++.++||||||+++|||++|+.||...... ..+.+. +..+...
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~----~~~~~~~ 244 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIEM----VGRGSLS 244 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHHHHH----HHHTSCC
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHHHHH----hcccccC
Confidence 4321 12223345899999999986 567888999999999999999999999743321 122222 2222211
Q ss_pred eeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 834 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 834 ~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
.... ......+..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 245 ~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1111 1112233578899999999999999999999999998764
No 90
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.8e-38 Score=365.18 Aligned_cols=254 Identities=23% Similarity=0.290 Sum_probs=203.6
Q ss_pred HHhhcccccccccEEEEEEEECC-CcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.++||+|+||+||+|+++. ++.||+|++++... ...+.+.+|..+++.++||||+++++++.+++..++|||
T Consensus 75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~E 154 (437)
T 4aw2_A 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154 (437)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEe
Confidence 45667899999999999999874 78999999875321 122348899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 155 y~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 155 YYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp CCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 99999999999842 4679999999999999999999998 999999999999999999999999999998765544
Q ss_pred cccccccccCCCccCCCccC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 762 THISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~-----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+. ...+......-....
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~~p~-- 304 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMNHKERFQFPT-- 304 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCCCS--
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH---HHhhhhccccccCCc--
Confidence 44444567999999999986 56789999999999999999999999974433221 111111000001111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 876 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~eVl~~ 876 (927)
.... ....+.+|+.+||..+|++ ||+++|+++.
T Consensus 305 ---~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 305 ---QVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---SCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---cccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0011 1236789999999888888 9999999874
No 91
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-38 Score=356.63 Aligned_cols=251 Identities=21% Similarity=0.338 Sum_probs=206.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.|++.+.||+|+||.||+|..+ +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 4677899999999999999986 689999999987655666789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC--CCcEEEeecccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~--~~~~kL~DFGla~~~~~~~~ 762 (927)
+|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++.......
T Consensus 132 gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 132 GGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 99999998742 4568999999999999999999998 99999999999999974 57799999999987654322
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccC
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 842 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 842 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+. ..... .++....
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~i~----~~~~~--~~~~~~~ 275 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQNVK----RCDWE--FDEDAFS 275 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHH----HCCCC--CCSSTTT
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---HHHHHHH----hCCCC--CCccccc
Confidence 22345899999999999999999999999999999999999999743321 1111111 11110 1111111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 843 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 843 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.....+.+++.+||+.||++|||++|+++.
T Consensus 276 ----~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 ----SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 223468899999999999999999999863
No 92
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.2e-37 Score=348.15 Aligned_cols=270 Identities=25% Similarity=0.387 Sum_probs=212.9
Q ss_pred hhhHHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHh--cCCCceeeeeeeeecCc--
Q 002410 599 LPELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH-- 674 (927)
Q Consensus 599 ~~el~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~--l~HpnIv~l~~~~~~~~-- 674 (927)
..+.....|.+.+.||+|+||.||+|++. |+.||||++... ..+.+.+|.++++. ++||||+++++++...+
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~ 111 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence 34566778888999999999999999985 899999998643 34667889999887 68999999999998765
Q ss_pred --eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcccccCCC
Q 002410 675 --QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINM 744 (927)
Q Consensus 675 --~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH--------~~~~~~ivH~DLkp~NILld~~~ 744 (927)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| + ++|+||||||+|||++.++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTS
T ss_pred cceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCC
Confidence 78999999999999999974 35899999999999999999999 6 8999999999999999999
Q ss_pred cEEEeeccccccccccccc---cccccccCCCccCCCccCCC------CCCcchhHHHHHHHHHHHHhC----------C
Q 002410 745 RAKVSDFGLSRQAEEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------K 805 (927)
Q Consensus 745 ~~kL~DFGla~~~~~~~~~---~~~~~~gt~~Y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG----------~ 805 (927)
.+||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876543322 12344689999999998765 334789999999999999999 7
Q ss_pred CCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 806 KPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 806 ~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.||....... .....+.. .+........+.... ...+....+.+++.+||+.||++||+++||++.|+++...+
T Consensus 265 ~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 265 LPYYDLVPSD-PSVEEMRK-VVCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CTTTTTSCSS-CCHHHHHH-HHTTSCCCCCCCGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCccccCcCc-ccHHHHHH-HHHHHHhCCCCcccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 7886432221 11112222 121111111111111 13356678999999999999999999999999999987654
No 93
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=358.14 Aligned_cols=274 Identities=22% Similarity=0.308 Sum_probs=214.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCc--eEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~--~~~LV~E 681 (927)
.|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4567899999999999999987 48999999997543 234567889999999999999999999987655 7899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc----cCCCcEEEeeccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 757 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl----d~~~~~kL~DFGla~~~ 757 (927)
|+++|+|.+++........+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999999865444559999999999999999999998 999999999999999 78888999999999876
Q ss_pred cccccccccccccCCCccCCCccCC--------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-hhhHHHHHHHhhh
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGN--------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA-ELNIVHWARSMIK 828 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~--------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~-~~~l~~~~~~~~~ 828 (927)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .......+.....
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred cCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 54322 223458999999999864 567889999999999999999999997433321 1111111111111
Q ss_pred cCCeeeec-----------cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 829 KGDVISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 829 ~~~~~~~~-----------d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
........ +..............+.+++.+||+.||++||+++|+++.+++++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11111000 001112334667778999999999999999999999999999988754
No 94
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.2e-38 Score=348.15 Aligned_cols=263 Identities=21% Similarity=0.308 Sum_probs=190.6
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..|++.+.||+|+||.||+|..+ +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 35677899999999999999876 589999999875432 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 683 MHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 683 ~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
++ |+|.+++.... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 98 69999886432 23468999999999999999999998 9999999999999999999999999999987643
Q ss_pred cccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcC---Ceeee
Q 002410 760 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG---DVISI 835 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~---~~~~~ 835 (927)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+....... .....
T Consensus 161 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 161 PVNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ---LKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp CCCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCTTTCGGG
T ss_pred Cccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChhHhhhh
Confidence 3221 223458999999999876 4689999999999999999999999975443221 11111111100 00000
Q ss_pred -----ccccc------------cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 836 -----VDPVL------------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 836 -----~d~~l------------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..+.. ...........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 00001112346889999999999999999999886
No 95
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.3e-38 Score=351.33 Aligned_cols=248 Identities=23% Similarity=0.341 Sum_probs=199.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
.|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.+..++||
T Consensus 10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 4667899999999999999987 58899999997542 23456788999999988 8999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 90 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 90 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999974 3568999999999999999999998 99999999999999999999999999999864322
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccch--hhHHHHHHHhhhcCCeeeeccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--LNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~--~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........+.....
T Consensus 164 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------ 236 (345)
T 3a8x_A 164 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------ 236 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------
T ss_pred CC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------
Confidence 21 23345699999999999999999999999999999999999999974322111 0111112222222211
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 870 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~ 870 (927)
.+. ......+.+++.+||+.||++||++
T Consensus 237 ~~p----~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 RIP----RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCC----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCC----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111 1123467899999999999999996
No 96
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.6e-38 Score=353.27 Aligned_cols=270 Identities=17% Similarity=0.231 Sum_probs=207.2
Q ss_pred HHHHhhcccccccccEEEEEEEECC------CcEEEEEEccCccchh-----------HHHHHHHHHHHHhcCCCceeee
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCSHR-----------TQQFVTEVALLSRIHHRNLVPL 666 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~~------g~~vAvK~l~~~~~~~-----------~~~~~~E~~~L~~l~HpnIv~l 666 (927)
...|++.+.||+|+||.||+|.++. ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3457778999999999999999875 4789999987543211 1224456667778889999999
Q ss_pred eeeeecC----ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc-
Q 002410 667 IGYCEEE----HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD- 741 (927)
Q Consensus 667 ~~~~~~~----~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld- 741 (927)
++++... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEec
Confidence 9998764 4589999999 99999999752 4679999999999999999999999 8999999999999999
Q ss_pred -CCCcEEEeecccccccccccccc------ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 002410 742 -INMRAKVSDFGLSRQAEEDLTHI------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 814 (927)
Q Consensus 742 -~~~~~kL~DFGla~~~~~~~~~~------~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~ 814 (927)
.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 88999999999998764432211 12344999999999999999999999999999999999999999843322
Q ss_pred chhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 815 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 815 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
............ ..+..++++.+.. ...+..+.+++..|++.+|++||++++|++.|++++....
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 268 --PKYVRDSKIRYR-ENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp --HHHHHHHHHHHH-HCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHhh-hhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 122222221111 1222233322211 1123478899999999999999999999999999887543
No 97
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=346.16 Aligned_cols=244 Identities=22% Similarity=0.359 Sum_probs=202.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e 86 (318)
T 1fot_A 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86 (318)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence 4667899999999999999987 68999999997532 1234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 87 YIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999984 4568999999999999999999998 99999999999999999999999999999875432
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .. ...... +.. .+.
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~---~~~i~~-~~~------~~p 223 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---KT---YEKILN-AEL------RFP 223 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HH---HHHHHH-CCC------CCC
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HH---HHHHHh-CCC------CCC
Confidence 23356899999999999999999999999999999999999999743321 11 111111 111 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~eVl~~ 876 (927)
. .....+.+++.+||+.||++|| +++|+++.
T Consensus 224 ~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 224 P----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp T----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred C----CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1 1223678999999999999999 88888753
No 98
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.8e-38 Score=350.44 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=202.7
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcE----EEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKE----VAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~----vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~L 678 (927)
..|++.+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 34567899999999999999976 3443 7888875432 233456788999999999999999999986 456889
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 99999999999999753 3578899999999999999999998 899999999999999999999999999998765
Q ss_pred ccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 759 EDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 759 ~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
..... ......++..|+|||++.+..++.++|||||||++|||++ |+.||....... .... +..+.....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~----~~~~~~~~~- 238 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDL----LEKGERLAQ- 238 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHH----HHTTCBCCC-
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHH----HHcCCCCCC-
Confidence 43322 2234457889999999998899999999999999999999 999997543322 1111 111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
+ ......+.+++.+||+.||++||+++|+++.|+++...
T Consensus 239 -~-------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 -P-------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp -C-------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred -C-------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 00112467899999999999999999999999988754
No 99
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-37 Score=344.20 Aligned_cols=259 Identities=22% Similarity=0.322 Sum_probs=200.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 35677899999999999999986 688999999875432 23477899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 114 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 114 RLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp ECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999984 3568999999999999999999998 99999999999999999999999999999876544
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe-eeecccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV-ISIVDPV 839 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~-~~~~d~~ 839 (927)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+..... ....
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~--- 257 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIPRPSTV--- 257 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCCCGGGT---
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCCCcccc---
Confidence 333333456899999999999999999999999999999999999999743221 11111211110 0011
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHhhhhhc
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIE 884 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-s~~eVl~~L~~~~~~e 884 (927)
....+..+.+++.+||+.||++|| +++++++.|++++...
T Consensus 258 -----~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 258 -----RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -----STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -----CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 111223688999999999999999 9999999999887654
No 100
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.2e-39 Score=379.56 Aligned_cols=261 Identities=27% Similarity=0.439 Sum_probs=212.2
Q ss_pred HHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
+....+++.++||+|+||.||+|.++++..||||+++... ...++|.+|+++|++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3344567789999999999999999988899999998643 235689999999999999999999999876 67899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.++++.. ....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 99999999999743 23458999999999999999999998 999999999999999999999999999998765432
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
........++..|+|||++.+..++.++|||||||++|||++ |+.||...... .+.+ .+..+....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~---~~~~----~i~~~~~~~------ 484 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD----QVERGYRMP------ 484 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH---HHHH----HHHTTCCCC------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCCC------
Confidence 222223346788999999988899999999999999999999 99999743321 1222 122221110
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
........+.+|+.+||+.||++||++++|++.|+++....
T Consensus 485 ---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 485 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 11122347889999999999999999999999999887543
No 101
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=349.99 Aligned_cols=261 Identities=21% Similarity=0.284 Sum_probs=193.9
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCceeeeeeee--------e
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYC--------E 671 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~--------~ 671 (927)
+....|++.++||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++ .
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 33446778899999999999999976 68999999987666666788999999999996 99999999998 3
Q ss_pred cCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcccccCCCcEEEe
Q 002410 672 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVS 749 (927)
Q Consensus 672 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~--ivH~DLkp~NILld~~~~~kL~ 749 (927)
.....++|+||++ |+|.+++........+++..++.++.||+.||+|||+ ++ |+||||||+|||++.++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEe
Confidence 4456899999995 7999988754445679999999999999999999998 77 9999999999999999999999
Q ss_pred ecccccccccccccc-----------ccccccCCCccCCCcc---CCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 002410 750 DFGLSRQAEEDLTHI-----------SSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 815 (927)
Q Consensus 750 DFGla~~~~~~~~~~-----------~~~~~gt~~Y~APE~l---~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~ 815 (927)
|||+++......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~- 259 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL- 259 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-
Confidence 999998765432211 1133589999999998 5667899999999999999999999999732211
Q ss_pred hhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 816 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 816 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
.... +.... .... .....+.+++.+||+.||++||+++|+++.|+++.....
T Consensus 260 -----~~~~-----~~~~~----~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 260 -----RIVN-----GKYSI----PPHD----TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ----------------CCC----CTTC----CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -----Hhhc-----CcccC----Cccc----ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 0000 00000 0001 111247799999999999999999999999999876543
No 102
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-38 Score=340.72 Aligned_cols=258 Identities=24% Similarity=0.417 Sum_probs=209.2
Q ss_pred Hhhcc-cccccccEEEEEEEEC---CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 607 NNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 607 ~~~~~-~LG~G~~G~Vy~a~~~---~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
+.+.+ .||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e 89 (287)
T 1u59_A 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVME 89 (287)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEE
Confidence 34444 8999999999999864 57889999998643 34567899999999999999999999999 4566899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 90 MAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp CCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred eCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999974 24569999999999999999999998 999999999999999999999999999998764432
Q ss_pred ccc--ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 762 THI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 762 ~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... +..+....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~----i~~~~~~~---- 233 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAF----IEQGKRME---- 233 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHH----HHTTCCCC----
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHH----HhcCCcCC----
Confidence 221 223346889999999988889999999999999999999 99999744322 12221 11221111
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccC
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 886 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~ 886 (927)
.+......+.+++.+||+.||++||++.|+++.|+++......
T Consensus 234 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 234 -----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp -----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred -----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 1112234788999999999999999999999999999876543
No 103
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=354.56 Aligned_cols=249 Identities=24% Similarity=0.336 Sum_probs=203.6
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++|++++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45677899999999999999987 58899999986532 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 99999999999983 5679999999999999999999998 99999999999999999999999999999876433
Q ss_pred ccccccccccCCCccCCCccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 761 LTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~---~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........+...... ...
T Consensus 169 ~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~----~~~----- 237 (384)
T 4fr4_A 169 T--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET----TVV----- 237 (384)
T ss_dssp C--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH----CCC-----
T ss_pred C--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh----ccc-----
Confidence 2 2234569999999999864 4589999999999999999999999975444333222222111 110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-HHHHHH
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-MQEIVL 875 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-~~eVl~ 875 (927)
.++......+.+|+.+||+.||++||+ +++|++
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011122346889999999999999998 676654
No 104
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-37 Score=340.46 Aligned_cols=265 Identities=23% Similarity=0.311 Sum_probs=206.5
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeee-ecCceEEEEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYE 681 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~-~~~~~~~LV~E 681 (927)
...|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++|++++..+..+ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 356778899999999999999974 68999999875432 224578899999999988877777665 66778899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc---cCCCcEEEeecccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFGla~~~~ 758 (927)
|+ +++|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 86 LL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp CC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred cc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 99 99999998743 4569999999999999999999998 999999999999999 789999999999998765
Q ss_pred ccccc------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 759 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 759 ~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........................
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 43321 123456899999999999999999999999999999999999999854443222222221111111110
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
+.+... .+..+.+++.+||+.||++||+++||++.|+++.....
T Consensus 240 -----~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 -----EVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -----HHHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -----hhhhcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 000011 12478899999999999999999999999999987544
No 105
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.4e-38 Score=362.84 Aligned_cols=251 Identities=23% Similarity=0.297 Sum_probs=201.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.++||+|+||+||+|+.+ +++.||+|++++... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 149 (410)
T 3v8s_A 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME 149 (410)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 4566789999999999999987 588999999865221 123457899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.++++. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 150 ~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 150 YMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp CCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 9999999999973 358999999999999999999998 999999999999999999999999999998765544
Q ss_pred cccccccccCCCccCCCccCCCC----CCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQ----LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~----~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+... ....+......-.... .
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~---~~~~i~~~~~~~~~p~--~ 297 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---TYSKIMNHKNSLTFPD--D 297 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHTHHHHCCCCT--T
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh---HHHHHHhccccccCCC--c
Confidence 33344567999999999987654 7899999999999999999999997443221 1111111000000000 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 876 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~--RPs~~eVl~~ 876 (927)
......+.+|+.+||+.+|++ ||+++||++.
T Consensus 298 --------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 298 --------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --------ccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 011236789999999999988 9999999875
No 106
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-37 Score=343.07 Aligned_cols=263 Identities=21% Similarity=0.304 Sum_probs=201.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|... +|+.||||+++.. .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 5778899999999999999975 6899999998752 23455778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 682 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
|+++++|.+++.... ....+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999986422 35668999999999999999999998 99999999999999999999999999999875443
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...+.. .+..........
T Consensus 190 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~~--- 260 (310)
T 2wqm_A 190 TTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK----KIEQCDYPPLPS--- 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-HHHHHH----HHHTTCSCCCCT---
T ss_pred Ccc-ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-HHHHHH----HhhcccCCCCcc---
Confidence 221 22345899999999999999999999999999999999999999743321 111211 122222211111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
......+.+++.+||+.||++||+++||++.|+++.....
T Consensus 261 -----~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 261 -----DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -----cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 1123468899999999999999999999999999887654
No 107
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.4e-38 Score=349.15 Aligned_cols=249 Identities=23% Similarity=0.351 Sum_probs=193.8
Q ss_pred HHHHhhcccccccccEEEEEEEE----CCCcEEEEEEccCcc----chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 675 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~ 675 (927)
...|++.+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 34577889999999999999987 468999999997642 2234568889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999999974 4568899999999999999999998 899999999999999999999999999997
Q ss_pred cccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 756 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 756 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .... ...
T Consensus 170 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~---~i~~-~~~--- 238 (327)
T 3a62_A 170 ESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---KTID---KILK-CKL--- 238 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH---HHHH-TCC---
T ss_pred ccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH---HHHH---HHHh-CCC---
Confidence 6433222 223346899999999999999999999999999999999999999744321 1111 1111 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 876 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~eVl~~ 876 (927)
.+ +......+.+++.+||+.||++|| +++|+++.
T Consensus 239 ---~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 ---NL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---CC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---CC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 01 111234688999999999999999 77787763
No 108
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-37 Score=340.73 Aligned_cols=258 Identities=29% Similarity=0.461 Sum_probs=203.0
Q ss_pred HhhcccccccccEEEEEEEECC----CcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeee-ecCceEEEEE
Q 002410 607 NNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVY 680 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~~----g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~-~~~~~~~LV~ 680 (927)
|++.+.||+|+||.||+|++.+ ...+|+|.+.... ....+.+.+|+.++++++||||+++++++ ..++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 5567899999999999998753 2368999987643 34557899999999999999999999986 4566789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 107 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 107 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp ECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred eCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999974 24568999999999999999999998 99999999999999999999999999999876443
Q ss_pred cc---ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 761 LT---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 761 ~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
.. .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||......+ ...... .+... .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~~~----~~~~~--~ 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLL----QGRRL--L 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHHHH----TTCCC--C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHHHh----cCCCC--C
Confidence 21 11223457788999999998899999999999999999999 555665332211 111111 11110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
. +......+.+++.+||+.||++||+++|+++.|++++..-.
T Consensus 253 ~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 253 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred C-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 11122468899999999999999999999999999887543
No 109
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=355.61 Aligned_cols=250 Identities=23% Similarity=0.336 Sum_probs=199.1
Q ss_pred cccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecCCCCH
Q 002410 610 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 688 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~~gsL 688 (927)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999876 6899999999876666678899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc--cCCCcEEEeecccccccccccccccc
Q 002410 689 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--DINMRAKVSDFGLSRQAEEDLTHISS 766 (927)
Q Consensus 689 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl--d~~~~~kL~DFGla~~~~~~~~~~~~ 766 (927)
.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 174 ~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 174 FDRIIDE--SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp HHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 9988642 3568999999999999999999998 999999999999999 5678999999999987654322 22
Q ss_pred ccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCH
Q 002410 767 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 846 (927)
Q Consensus 767 ~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 846 (927)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+. ..... .. .. .+....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~----~i~~~-~~-~~-~~~~~~---- 313 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE--TLN----NILAC-RW-DL-EDEEFQ---- 313 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHH----HHHHT-CC-CS-CSGGGT----
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH----HHHhc-cC-CC-Chhhhc----
Confidence 3458999999999999999999999999999999999999997443221 111 11111 10 00 001111
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCHHHHHH--HHHh
Q 002410 847 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQD 879 (927)
Q Consensus 847 ~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~--~L~~ 879 (927)
.....+.+++.+||+.||++||+++|+++ .+++
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~ 348 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence 12346889999999999999999999987 4443
No 110
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3e-37 Score=337.39 Aligned_cols=263 Identities=23% Similarity=0.313 Sum_probs=207.4
Q ss_pred HHhhcccccccccEEEEEEEE-CCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeee-ecCceEEEEEEec
Q 002410 606 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEYM 683 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~-~~~~~~~LV~E~~ 683 (927)
.|++.+.||+|+||.||+|+. .+|+.||||++..... .+++.+|++++++++|++++..+..+ ...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 456789999999999999997 4789999999865432 34688999999999988877766655 5667789999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc---cCCCcEEEeecccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFGla~~~~~~ 760 (927)
+++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 -GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99999999743 4569999999999999999999998 999999999999999 48899999999999876543
Q ss_pred ccc------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 761 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 761 ~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH--
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch--
Confidence 321 123456899999999999999999999999999999999999999854433222222222111111000
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
+.+... .+..+.+++.+||+.||++||+++||++.|+++.....
T Consensus 240 ---~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 240 ---EVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ---HHHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ---HHHHhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 001111 12468899999999999999999999999999877543
No 111
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=345.99 Aligned_cols=263 Identities=22% Similarity=0.312 Sum_probs=205.8
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeee----cCceEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE----EEHQRIL 678 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~----~~~~~~L 678 (927)
...|++.+.||+|+||.||+++.. +|+.||||++........+.+.+|++++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 345677899999999999999984 68999999987665666788999999999999999999999986 3457899
Q ss_pred EEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 999999999999987532 24679999999999999999999998 89999999999999999999999999998765
Q ss_pred cccccc--------cccccccCCCccCCCccCCCC---CCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 002410 758 EEDLTH--------ISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 826 (927)
Q Consensus 758 ~~~~~~--------~~~~~~gt~~Y~APE~l~~~~---~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 826 (927)
...... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....... .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~--- 260 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALAV--- 260 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHHH---
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHHh---
Confidence 322111 011234799999999987553 6899999999999999999999996321111 1111111
Q ss_pred hhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 827 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 827 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
... .. . + ........+.+++.+||+.||++||+++|+++.|+++...
T Consensus 261 -~~~-~~-~--~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 261 -QNQ-LS-I--P-----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -HCC----C--C-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred -hcc-CC-C--C-----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 110 00 0 0 0111234688999999999999999999999999987643
No 112
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=342.66 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=198.1
Q ss_pred hhhHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCc
Q 002410 599 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 674 (927)
Q Consensus 599 ~~el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~ 674 (927)
..++....|++.++||+|+||+||+|++. +|+.||||++.... ......+..|+..+.++ +||||+++++++.+++
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 34666778889999999999999999987 69999999986532 23344556666666665 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccc
Q 002410 675 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 754 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla 754 (927)
..++||||+ +++|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceee
Confidence 999999999 77999988753 4569999999999999999999998 89999999999999999999999999998
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .. ..+..+...
T Consensus 205 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~-----~~~~~~~~~- 270 (311)
T 3p1a_A 205 VELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----GW-----QQLRQGYLP- 270 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----HH-----HHHTTTCCC-
T ss_pred eecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HH-----HHHhccCCC-
Confidence 8764432 2233458999999999876 78999999999999999999977765221 11 111111111
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+.... .....+.+++.+||+.||++|||++|+++
T Consensus 271 ---~~~~~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 ---PEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---ccccc----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11111 12346889999999999999999999986
No 113
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=346.42 Aligned_cols=266 Identities=24% Similarity=0.296 Sum_probs=198.6
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-----hhHHHHHHHHHHHHhcC---CCceeeeeeee
Q 002410 600 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-----HRTQQFVTEVALLSRIH---HRNLVPLIGYC 670 (927)
Q Consensus 600 ~el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-----~~~~~~~~E~~~L~~l~---HpnIv~l~~~~ 670 (927)
.++....|++.++||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++ ||||+++++++
T Consensus 4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 3455667888999999999999999975 689999999864321 12345677888777765 99999999998
Q ss_pred ecCc-----eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc
Q 002410 671 EEEH-----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 745 (927)
Q Consensus 671 ~~~~-----~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~ 745 (927)
.... ..++||||++ |+|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 7654 5789999997 6999999854 23459999999999999999999999 99999999999999999999
Q ss_pred EEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH
Q 002410 746 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 825 (927)
Q Consensus 746 ~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 825 (927)
+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...+..
T Consensus 159 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~ 233 (308)
T 3g33_A 159 VKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFD 233 (308)
T ss_dssp EEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH---HHHHHH
T ss_pred EEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHH
Confidence 99999999987643322 2344689999999999989999999999999999999999999974433221 111111
Q ss_pred hhh---cCCeeeec---ccccc-------CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 826 MIK---KGDVISIV---DPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 826 ~~~---~~~~~~~~---d~~l~-------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
... ........ ..... .....+....+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 111 00000000 00000 0001122347889999999999999999999986
No 114
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.1e-37 Score=338.43 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=207.9
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeec------
Q 002410 600 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------ 672 (927)
Q Consensus 600 ~el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~------ 672 (927)
+......|++.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 4556677888999999999999999987 79999999997543 356789999999999999999998754
Q ss_pred ----------CceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC
Q 002410 673 ----------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 742 (927)
Q Consensus 673 ----------~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~ 742 (927)
....++||||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcC
Confidence 45589999999999999999753 24578999999999999999999998 89999999999999999
Q ss_pred CCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHH
Q 002410 743 NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHW 822 (927)
Q Consensus 743 ~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~ 822 (927)
++.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+... ....
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~-- 228 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFF-- 228 (284)
T ss_dssp TTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHH--
T ss_pred CCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHH--
Confidence 99999999999987654322 22345899999999999989999999999999999999999887411 1111
Q ss_pred HHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 823 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 823 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
..+..+... ..+ ...+.+++.+||+.||++||++.|+++.|+.+....+
T Consensus 229 --~~~~~~~~~--------~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 229 --TDLRDGIIS--------DIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp --HHHHTTCCC--------TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred --HHhhccccc--------ccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 111122111 111 2357899999999999999999999999998876544
No 115
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.5e-38 Score=338.77 Aligned_cols=250 Identities=20% Similarity=0.278 Sum_probs=204.3
Q ss_pred HHHHhhcccccccccEEEEEEEECC-CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
...|.+.+.||+|+||.||+|..+. ++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 3567788999999999999999874 779999999876566678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc---cCCCcEEEeeccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFGla~~~~~ 759 (927)
+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 88 CTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999999874 4568999999999999999999998 999999999999999 7889999999999987654
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 839 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 839 (927)
... .....||+.|+|||.+.+. ++.++||||||+++|||++|+.||......+ ... .+..+.... ...
T Consensus 162 ~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~----~~~~~~~~~--~~~ 229 (277)
T 3f3z_A 162 GKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE---VML----KIREGTFTF--PEK 229 (277)
T ss_dssp TSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHCCCCC--CHH
T ss_pred ccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH---HHH----HHHhCCCCC--Cch
Confidence 322 2334589999999998764 8999999999999999999999997433211 111 111111100 000
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
... .....+.+++.+||+.||++||++.|+++
T Consensus 230 ~~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 DWL----NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 11346889999999999999999999986
No 116
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.4e-38 Score=350.89 Aligned_cols=264 Identities=24% Similarity=0.429 Sum_probs=212.7
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecC
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 673 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~ 673 (927)
++....|++.+.||+|+||.||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 344456778899999999999999865 367899999976433 3456789999999999999999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcE
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSV-------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRA 746 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~ 746 (927)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeE
Confidence 99999999999999999987432 12467899999999999999999998 899999999999999999999
Q ss_pred EEeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHH
Q 002410 747 KVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 824 (927)
Q Consensus 747 kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~ 824 (927)
||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~--- 251 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE---QVLR--- 251 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---HHHH---
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---HHHH---
Confidence 9999999987544322 12223346889999999988889999999999999999999 89999743321 1111
Q ss_pred HhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 825 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 825 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
.+..+..... .......+.+++.+||+.||++||++.|+++.|++++..
T Consensus 252 -~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 252 -FVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp -HHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred -HHHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1112221111 112234688999999999999999999999999988663
No 117
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=345.20 Aligned_cols=264 Identities=23% Similarity=0.297 Sum_probs=198.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
.|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 3567889999999999999987 489999999865433 2356788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++++|.+++. ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~~l~~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 84 CDHTVLHELDR---YQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CSEEHHHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCCchHHHHHh---hhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999887 34668999999999999999999998 9999999999999999999999999999987653322
Q ss_pred ccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH--------hhhcCCee
Q 002410 763 HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS--------MIKKGDVI 833 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~--------~~~~~~~~ 833 (927)
. .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+.......... ........
T Consensus 158 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 Y-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred c-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 2 223458999999999865 6789999999999999999999999975443322211111000 00000000
Q ss_pred ---eeccccccCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 834 ---SIVDPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 834 ---~~~d~~l~~~---~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
...++..... ........+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000 001223468899999999999999999999864
No 118
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.7e-38 Score=354.68 Aligned_cols=246 Identities=25% Similarity=0.373 Sum_probs=201.2
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV 679 (927)
..|.+.+.||+|+||.||+|+.+ +|+.||||+++... ....+.+..|..+++.+ +||||+++++++.+.+..++|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 45667899999999999999987 58999999997532 23346678899999887 899999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 999999999999974 3568999999999999999999998 9999999999999999999999999999986432
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 839 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 839 (927)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+. +..+.. .
T Consensus 171 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~----i~~~~~------~ 236 (345)
T 1xjd_A 171 GDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELFHS----IRMDNP------F 236 (345)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHCCC------C
T ss_pred CCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH---HHHHH----HHhCCC------C
Confidence 221 233456999999999999999999999999999999999999999744321 11111 111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHH-HHH
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQ-EIV 874 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~-eVl 874 (927)
... .....+.+++.+||+.||++||++. ||+
T Consensus 237 ~p~----~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 YPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCc----ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111 1224678999999999999999997 654
No 119
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=349.77 Aligned_cols=259 Identities=23% Similarity=0.399 Sum_probs=201.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCc----EEEEEEccCc-cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~----~vAvK~l~~~-~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
...|++.+.||+|+||.||+|++. +++ .||+|.+... .....+.+.+|+.++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 345677899999999999999975 344 3577777543 2345678999999999999999999999998765 78
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+|+||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 999999999999999753 4568999999999999999999998 99999999999999999999999999999876
Q ss_pred cccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 758 EEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 758 ~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
...... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... +... +..+....
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~----~~~~~~~~- 239 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSI----LEKGERLP- 239 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHH----HHTTCCCC-
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHcCCCCC-
Confidence 443221 2223346788999999999999999999999999999999 999997544322 1111 11111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
........+.+++.+||+.||++||+++|+++.|+++....
T Consensus 240 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 240 --------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp --------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred --------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 11112336889999999999999999999999999987543
No 120
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-38 Score=349.63 Aligned_cols=264 Identities=29% Similarity=0.488 Sum_probs=205.7
Q ss_pred hHHHHHHhhcccccccccEEEEEEEECC-----CcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCc
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMKD-----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 674 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~~-----g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~ 674 (927)
++....+.+.+.||+|+||.||+|.+.. +..||||+++.... .....+.+|++++++++||||+++++++.+.+
T Consensus 40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 119 (333)
T 1mqb_A 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119 (333)
T ss_dssp BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence 3344455667899999999999998763 24699999976433 34567999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccc
Q 002410 675 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 754 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla 754 (927)
..++||||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred CcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcc
Confidence 999999999999999999753 4578999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccccc--cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCC
Q 002410 755 RQAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGD 831 (927)
Q Consensus 755 ~~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 831 (927)
+........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.. .+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~~----~~~~~~ 267 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVMK----AINDGF 267 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH----HHHTTC
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH---HHHH----HHHCCC
Confidence 876543221 1122335778999999998899999999999999999999 99999743221 1111 112211
Q ss_pred eeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 832 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 832 ~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
... ........+.+++.+||+.||++||++.|+++.|++++....
T Consensus 268 ~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 268 RLP---------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp CCC---------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred cCC---------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 100 011223468899999999999999999999999999886543
No 121
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=360.57 Aligned_cols=254 Identities=24% Similarity=0.249 Sum_probs=201.6
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|+.+ +|+.||||++++.. ....+.+.+|..++.+++||||+++++++.+.+..++||
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 34566789999999999999986 68999999997532 122345889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++... +..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++++||+|||+++.....
T Consensus 141 E~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp CCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred cCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 999999999999742 3468999999999999999999998 99999999999999999999999999999876554
Q ss_pred ccccccccccCCCccCCCccC-------CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCee
Q 002410 761 LTHISSVARGTVGYLDPEYYG-------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 833 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~-------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 833 (927)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||...+..+. ...+......-..
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~~~~- 291 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET---YGKIVHYKEHLSL- 291 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTHHHHCCC-
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH---HHHHHhcccCcCC-
Confidence 433334457999999999986 45789999999999999999999999974433211 1111110000001
Q ss_pred eeccccccCCCCHHHHHHHHHHHHHhhccCCCCC---CCHHHHHHH
Q 002410 834 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR---PKMQEIVLA 876 (927)
Q Consensus 834 ~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~R---Ps~~eVl~~ 876 (927)
+.... .....+.+++.+||. +|++| |+++|+++.
T Consensus 292 ----p~~~~----~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 ----PLVDE----GVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ----C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ----Ccccc----CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 10111 122367899999999 99998 589988754
No 122
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.3e-38 Score=345.62 Aligned_cols=265 Identities=26% Similarity=0.428 Sum_probs=211.4
Q ss_pred HHHHHhhcccccccccEEEEEEEE------CCCcEEEEEEccCccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeecCc
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 674 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~------~~g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~ 674 (927)
....|++.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 345677889999999999999985 2468899999976543 3456799999999999 7999999999987654
Q ss_pred -eEEEEEEecCCCCHHHHhccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc
Q 002410 675 -QRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 740 (927)
Q Consensus 675 -~~~LV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl 740 (927)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ ++|+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEE
Confidence 58999999999999999985432 2238899999999999999999998 999999999999999
Q ss_pred cCCCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhh
Q 002410 741 DINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 818 (927)
Q Consensus 741 d~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~ 818 (927)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~ 259 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E 259 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--H
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH--H
Confidence 99999999999999876443222 2233457889999999988899999999999999999998 999997443321 1
Q ss_pred HHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 819 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 819 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
... .+..+.... . .......+.+++.+||+.||++||+++||++.|++++....
T Consensus 260 ~~~----~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 260 FCR----RLKEGTRMR-----A----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp HHH----HHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHH----HhccCccCC-----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 111 111111111 1 11122368899999999999999999999999999987543
No 123
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-38 Score=353.14 Aligned_cols=245 Identities=23% Similarity=0.308 Sum_probs=200.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 89 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence 4667899999999999999985 689999999865321 223578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 90 ~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 90 YA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred CC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99 7899998874 4579999999999999999999998 899999999999999999999999999998765432
Q ss_pred cccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
. .....||+.|+|||++.+..+ ++++|||||||++|+|++|+.||......... ..+..+.
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-------~~i~~~~--------- 224 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-------KKVNSCV--------- 224 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-------CCCCSSC---------
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-------HHHHcCC---------
Confidence 2 233468999999999988776 78999999999999999999999743322110 0000000
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
...+......+.+++.+||+.||.+|||++|+++.
T Consensus 225 -~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 -YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00111223467899999999999999999999864
No 124
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-37 Score=338.19 Aligned_cols=259 Identities=27% Similarity=0.396 Sum_probs=205.2
Q ss_pred hhcccccccccEEEEEEEECC----CcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE-EEEEE
Q 002410 608 NFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR-ILVYE 681 (927)
Q Consensus 608 ~~~~~LG~G~~G~Vy~a~~~~----g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~-~LV~E 681 (927)
...++||+|+||.||+|.+.+ +..||+|++..... ...+.+.+|++++++++||||+++++++.+.+.. ++|+|
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 345889999999999998643 23799999876433 4557899999999999999999999999766655 99999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+.+|+|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++......
T Consensus 104 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 104 YMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred cccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999975 35678999999999999999999998 899999999999999999999999999998654322
Q ss_pred c---ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 762 T---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 762 ~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
. .......+++.|+|||.+.+..++.++||||||+++|||++|..|+...... ........ .+....
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~----~~~~~~---- 248 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTHFLA----QGRRLP---- 248 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHHHHH----TTCCCC----
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHHHhh----cCCCCC----
Confidence 1 1222345788999999999999999999999999999999966554322221 12222211 111100
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhccC
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 886 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~~ 886 (927)
.+......+.+++.+||+.||++|||++|+++.|++++.....
T Consensus 249 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 249 -----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 0111234688999999999999999999999999999876543
No 125
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=348.19 Aligned_cols=271 Identities=24% Similarity=0.394 Sum_probs=198.0
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHH--HHhcCCCceeeeeeeee-----cCceEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVAL--LSRIHHRNLVPLIGYCE-----EEHQRI 677 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~--L~~l~HpnIv~l~~~~~-----~~~~~~ 677 (927)
..|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+. .....+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 3466789999999999999987 58999999987432 3344445444 44589999999998542 334678
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEecCCCCCcccccCCCcEEE
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP---------GIIHRDVKSSNILLDINMRAKV 748 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~---------~ivH~DLkp~NILld~~~~~kL 748 (927)
+||||+++|+|.+++.. ...++..++.++.||+.||+|||+ . +|+||||||+|||++.++.+||
T Consensus 89 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEE
Confidence 99999999999999974 345889999999999999999998 6 9999999999999999999999
Q ss_pred eecccccccccccc-------ccccccccCCCccCCCccCC-------CCCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 002410 749 SDFGLSRQAEEDLT-------HISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 814 (927)
Q Consensus 749 ~DFGla~~~~~~~~-------~~~~~~~gt~~Y~APE~l~~-------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~ 814 (927)
+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987643221 11223458999999999977 45678999999999999999997776422221
Q ss_pred ch-hh-H---------HHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 815 AE-LN-I---------VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 815 ~~-~~-l---------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
.. .. . ................+.... .........+.+++.+||+.||++|||++|+++.|++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 11 00 0 001111111111111111111 11224566799999999999999999999999999999876
Q ss_pred ccCCC
Q 002410 884 EKGGD 888 (927)
Q Consensus 884 e~~~~ 888 (927)
-....
T Consensus 320 ~~~~~ 324 (336)
T 3g2f_A 320 WERNK 324 (336)
T ss_dssp CCC--
T ss_pred HHhcc
Confidence 44433
No 126
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=9.9e-38 Score=350.91 Aligned_cols=244 Identities=23% Similarity=0.299 Sum_probs=202.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 121 (350)
T 1rdq_E 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence 4567899999999999999987 68999999986532 2234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 122 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 122 YVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp CCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999984 3568999999999999999999998 99999999999999999999999999999876432
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+ . +..+.. .+.
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~---~-i~~~~~------~~p 258 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYE---K-IVSGKV------RFP 258 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---H-HHHCCC------CCC
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH---HHHH---H-HHcCCC------CCC
Confidence 22346899999999999999999999999999999999999999743321 1111 1 111211 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----~~eVl~~ 876 (927)
. .....+.+++.+||+.||++||+ ++||++.
T Consensus 259 ~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 S----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp T----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred C----CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1 12346889999999999999998 7887653
No 127
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=353.33 Aligned_cols=266 Identities=28% Similarity=0.445 Sum_probs=211.2
Q ss_pred HHHHhhcccccccccEEEEEEEE-----CCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCc--eE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QR 676 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~--~~ 676 (927)
...+++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 44567789999999999999985 358899999998776667788999999999999999999999986644 68
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 9999999999999999853 3568999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccc--cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCccccc---------chhhHHHHHHH
Q 002410 757 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWARS 825 (927)
Q Consensus 757 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~---------~~~~l~~~~~~ 825 (927)
....... ......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ...........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 6543321 122334677899999998888999999999999999999999998632110 00111111112
Q ss_pred hhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 826 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 826 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
.+..+.... .....+..+.+++.+||+.||++||+++||++.|+++.+.
T Consensus 275 ~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNGRLP---------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCCCCC---------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 222211111 1112334788999999999999999999999999988653
No 128
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.4e-38 Score=346.30 Aligned_cols=261 Identities=25% Similarity=0.370 Sum_probs=197.2
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce----E
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----R 676 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~----~ 676 (927)
..|++.+.||+|+||.||+|+.. +++.||||+++... ......+.+|++++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 45677899999999999999974 68999999997643 2334678999999999999999999999876543 4
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 999999999999999974 4578999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccc--cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 757 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 757 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~~~ 239 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPIPP 239 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCCCH
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCCCc
Confidence 6443221 2223458999999999999999999999999999999999999997433211 1111122111110
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHH-HHHHHHhhhhhc
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-IVLAIQDSIKIE 884 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~e-Vl~~L~~~~~~e 884 (927)
. .. .......+.+++.+||+.||++||++.+ +.+.+.+....+
T Consensus 240 ~---~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 283 (311)
T 3ork_A 240 S---AR----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283 (311)
T ss_dssp H---HH----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTC
T ss_pred c---cc----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCC
Confidence 0 00 0112346889999999999999996555 455566555443
No 129
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=350.75 Aligned_cols=249 Identities=24% Similarity=0.336 Sum_probs=188.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEec
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
..|++.+.||+|+||.||+|+.+ +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 34667899999999999999987 57899999997542 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC---CCcEEEeecccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFGla~~~~~~ 760 (927)
++|+|.+++.. ...+++.+++.++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 131 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 131 TGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999973 4568999999999999999999998 89999999999999975 889999999999875432
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... .+...... ...+
T Consensus 205 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~----~i~~~~~~-~~~~-- 273 (349)
T 2w4o_A 205 V--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMFR----RILNCEYY-FISP-- 273 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHHH----HHHTTCCC-CCTT--
T ss_pred c--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHHH----HHHhCCCc-cCCc--
Confidence 2 1233458999999999999999999999999999999999999997333211 1111 11111111 1111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
........+.+++.+||+.||++|||+.|+++
T Consensus 274 ---~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 ---WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11122346889999999999999999999986
No 130
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.2e-37 Score=341.28 Aligned_cols=251 Identities=24% Similarity=0.336 Sum_probs=205.4
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch------hHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~------~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
...|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 466888999999999999999987 5899999998754321 357799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC----cEEEeecc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 752 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFG 752 (927)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999973 4678999999999999999999998 9999999999999999887 79999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 753 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 753 la~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
++........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......+ ... . +.....
T Consensus 165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~---~-i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLA---N-ITSVSY 235 (321)
T ss_dssp TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHH---H-HHTTCC
T ss_pred cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH---HHH---H-HHhccc
Confidence 9987654322 233458999999999999999999999999999999999999997433211 111 1 111111
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..++..... ....+.+++.+||+.||++|||++|+++
T Consensus 236 --~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011111111 1236789999999999999999999987
No 131
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-37 Score=349.02 Aligned_cols=257 Identities=25% Similarity=0.295 Sum_probs=199.2
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc-----cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-----CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~-----~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
...|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 466788999999999999999986 6889999998643 2344578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCC-------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 002410 678 LVYEYMHNGTLRDRLHGSV-------------------------------------NQKPLDWLTRLQIAHDAAKGLEYL 720 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~-------------------------------------~~~~l~~~~~~~i~~qia~gL~~L 720 (927)
+||||+++|+|.+++.... ....+++..+..++.||+.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985211 012246778889999999999999
Q ss_pred HhcCCCCeEecCCCCCcccccCCC--cEEEeecccccccccccc---ccccccccCCCccCCCccCC--CCCCcchhHHH
Q 002410 721 HTGCNPGIIHRDVKSSNILLDINM--RAKVSDFGLSRQAEEDLT---HISSVARGTVGYLDPEYYGN--QQLTEKSDVYS 793 (927)
Q Consensus 721 H~~~~~~ivH~DLkp~NILld~~~--~~kL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~~--~~~s~ksDVwS 793 (927)
|+ ++|+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||.+.+ ..++.++||||
T Consensus 185 H~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 HN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 98 8999999999999998776 899999999986543221 12234568999999999865 67899999999
Q ss_pred HHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 002410 794 FGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI 873 (927)
Q Consensus 794 lGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eV 873 (927)
|||++|||++|+.||......+ . .......... ...+. .......+.+++.+||+.||++||++.|+
T Consensus 262 lG~il~el~~g~~pf~~~~~~~--~----~~~~~~~~~~--~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVNDAD--T----ISQVLNKKLC--FENPN-----YNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHH--H----HHHHHHCCCC--TTSGG-----GGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChHH--H----HHHHHhcccc--cCCcc-----cccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 9999999999999997443221 1 1111111110 00010 01123468899999999999999999999
Q ss_pred HHH
Q 002410 874 VLA 876 (927)
Q Consensus 874 l~~ 876 (927)
++.
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 873
No 132
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-39 Score=355.37 Aligned_cols=261 Identities=26% Similarity=0.406 Sum_probs=189.4
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHh--cCCCceeeeeeeeecCc----eEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH----QRILV 679 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~--l~HpnIv~l~~~~~~~~----~~~LV 679 (927)
.|.+.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 4667899999999999999876 899999998743 34567788888887 78999999999998766 78999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcccccCCCcEEEeec
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 751 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH--------~~~~~~ivH~DLkp~NILld~~~~~kL~DF 751 (927)
|||+++|+|.+++.. ..+++..++.++.|++.||+||| + ++|+||||||+|||++.++.+||+||
T Consensus 80 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999973 35888899999999999999999 6 89999999999999999999999999
Q ss_pred ccccccccccccc---ccccccCCCccCCCccCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCccc
Q 002410 752 GLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 812 (927)
Q Consensus 752 Gla~~~~~~~~~~---~~~~~gt~~Y~APE~l~~~------~~s~ksDVwSlGvlL~eLltG----------~~Pf~~~~ 812 (927)
|+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997754433221 2233689999999999776 445789999999999999999 66664221
Q ss_pred cc--chhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 813 FG--AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 813 ~~--~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.. ....... .+............. ...+....+.+++.+||+.||++|||++||++.|+++...+
T Consensus 233 ~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSDPSVEEMRK----VVCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCCCC-CHH----HHTTSCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCccHHHHHH----HHHHhhcCCCccccc---cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 11 0011111 111111111111111 12356678999999999999999999999999999887754
No 133
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.5e-38 Score=351.31 Aligned_cols=249 Identities=25% Similarity=0.339 Sum_probs=202.1
Q ss_pred HHHHhhcccccccccEEEEEEEECC-CcEEEEEEccCcc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~L 678 (927)
...|++.+.||+|+||.||+|+.+. |+.||||+++... ....+.+.+|..+++.+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 3456778999999999999999874 7899999997542 23446788999999988 79999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 99 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999974 3568999999999999999999998 999999999999999999999999999998643
Q ss_pred ccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 759 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+.+ .... +..
T Consensus 173 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~---~i~~-~~~------ 238 (353)
T 2i0e_A 173 WDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQ---SIME-HNV------ 238 (353)
T ss_dssp CTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH---HHHH-CCC------
T ss_pred cCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH---HHHH---HHHh-CCC------
Confidence 2221 233456999999999999999999999999999999999999999743321 1111 1111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHHH
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVLA 876 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----~~eVl~~ 876 (927)
.+ +......+.+++.+||+.||++||+ ++||++.
T Consensus 239 ~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 239 AY----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CC----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01 1112346889999999999999995 5666643
No 134
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=348.83 Aligned_cols=265 Identities=16% Similarity=0.196 Sum_probs=207.1
Q ss_pred HHHhhcccccccccEEEEEEEECC---------CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceee----------
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVP---------- 665 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~---------g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~---------- 665 (927)
..|.+.+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 356678999999999999999874 789999998754 46789999999999999988
Q ss_pred -----eeeeeec-CceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccc
Q 002410 666 -----LIGYCEE-EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 739 (927)
Q Consensus 666 -----l~~~~~~-~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NIL 739 (927)
+++++.. ++..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl 191 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIF 191 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEE
Confidence 5666655 67889999999 99999999853 23679999999999999999999999 89999999999999
Q ss_pred ccCCC--cEEEeeccccccccccccc------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 002410 740 LDINM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVE 811 (927)
Q Consensus 740 ld~~~--~~kL~DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~ 811 (927)
++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 8999999999876543221 112346899999999999999999999999999999999999999744
Q ss_pred cccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 812 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 812 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
... ...+......... ......+.... .......+.+++.+||+.||++||+++||++.|++++....
T Consensus 272 ~~~-~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 272 LPN-TEDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTC-HHHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcC-HHHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 322 1222222221111 11111111100 00112468899999999999999999999999999987654
No 135
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-37 Score=337.13 Aligned_cols=244 Identities=24% Similarity=0.368 Sum_probs=179.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 14 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (275)
T 2eue_A 14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEeh
Confidence 3566789999999999999875 68999999987542 2335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+ +++|.+.+.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hc-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 99 7788888873 4569999999999999999999998 999999999999999999999999999998654432
Q ss_pred cccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
. .....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....... ... .+..+.. .+
T Consensus 167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~----~~~~~~~------~~ 231 (275)
T 2eue_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFK----NISNGVY------TL 231 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH----HHHHTCC------CC
T ss_pred c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---HHH----HHHhCCC------CC
Confidence 2 223458999999999987765 789999999999999999999997433211 111 1111111 01
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+......+.+++.+||+.||++|||++|+++
T Consensus 232 ----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 232 ----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1112236789999999999999999999975
No 136
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=347.62 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=194.8
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCC--CceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~H--pnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||++...+++.||||++.... ....+.+.+|++++++++| +||+++++++.+++..++|||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 89 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence 466789999999999999999889999999986532 3345789999999999976 999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
+.+++|.+++.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||++ ++.+||+|||+++......
T Consensus 90 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp -CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred -CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999984 4678999999999999999999998 8999999999999997 6789999999998765433
Q ss_pred cc-cccccccCCCccCCCccCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhc
Q 002410 762 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 829 (927)
Q Consensus 762 ~~-~~~~~~gt~~Y~APE~l~~-----------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 829 (927)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... . .......+..
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~---~~~~~~~~~~ 236 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--Q---ISKLHAIIDP 236 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS--H---HHHHHHHHCT
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh--H---HHHHHHHhcC
Confidence 22 2234569999999999854 6789999999999999999999999973221 1 1111111111
Q ss_pred CCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 830 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 830 ~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.. ....+......+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~---------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 237 NH---------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp TS---------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Cc---------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11 111111112367899999999999999999999875
No 137
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.4e-37 Score=332.59 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=204.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 56778899999999999999987 68999999986433 33457889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++++|.+++. ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 87 CSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999987 34678999999999999999999998 9999999999999999999999999999986543221
Q ss_pred -ccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 763 -HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 763 -~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
.......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||....... .....+... ... ..+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~----~~~---~~~-- 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEK----KTY---LNP-- 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHHHTT----CTT---STT--
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHhhhc----ccc---cCc--
Confidence 12234468999999999987665 789999999999999999999997443321 122222111 000 000
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.......+.+++.+||+.||++|||++|+++
T Consensus 231 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 ----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0112346789999999999999999999876
No 138
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6e-38 Score=353.58 Aligned_cols=265 Identities=24% Similarity=0.268 Sum_probs=203.7
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-----CCceeeeeeeeecCc
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----HRNLVPLIGYCEEEH 674 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-----HpnIv~l~~~~~~~~ 674 (927)
++....|.+.++||+|+||.||+|+.. +++.||||+++.. ....+.+..|+.++++++ ||||+++++++...+
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 444556788899999999999999985 6899999999753 344567788999999996 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC------------
Q 002410 675 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI------------ 742 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~------------ 742 (927)
..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred eeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhc
Confidence 999999999 99999999854 23468999999999999999999998 99999999999999975
Q ss_pred -------------CCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 002410 743 -------------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 809 (927)
Q Consensus 743 -------------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 809 (927)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 789999999999864432 223468999999999999999999999999999999999999997
Q ss_pred cccccchhhHHHHHHHhhh--------cCCeeeecc-ccc----cCCC-CH---------------HHHHHHHHHHHHhh
Q 002410 810 VEDFGAELNIVHWARSMIK--------KGDVISIVD-PVL----IGNV-KI---------------ESIWRIAEVAIQCV 860 (927)
Q Consensus 810 ~~~~~~~~~l~~~~~~~~~--------~~~~~~~~d-~~l----~~~~-~~---------------~~~~~l~~Li~~Cl 860 (927)
.....+............. ........+ ..+ .... .. .....+.+|+.+||
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 340 (360)
T 3llt_A 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSIL 340 (360)
T ss_dssp CSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHh
Confidence 5443222111111100000 000000000 000 0000 00 01146779999999
Q ss_pred ccCCCCCCCHHHHHH
Q 002410 861 EQRGFSRPKMQEIVL 875 (927)
Q Consensus 861 ~~dP~~RPs~~eVl~ 875 (927)
+.||++|||++|+++
T Consensus 341 ~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 341 QIDPTLRPSPAELLK 355 (360)
T ss_dssp CSSGGGSCCHHHHTT
T ss_pred cCChhhCCCHHHHhc
Confidence 999999999999975
No 139
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.4e-37 Score=351.20 Aligned_cols=251 Identities=23% Similarity=0.279 Sum_probs=192.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.|++.+.||+|+||.||+++.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 5677899999999999999987 689999999975432 33668899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc--EEEeecccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~--~kL~DFGla~~~~~~~~ 762 (927)
+|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++. +||+|||+++......
T Consensus 100 ~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 100 GGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 9999999973 4569999999999999999999998 99999999999999987765 9999999997533221
Q ss_pred ccccccccCCCccCCCccCCCCCCcc-hhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEK-SDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~k-sDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
......||+.|+|||++.+..+..+ +|||||||++|||++|+.||........ ........... ......
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~~~~~~~~~-~~~~~~----- 243 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD--YRKTIQRILSV-KYSIPD----- 243 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC--HHHHHHHHHTT-CCCCCT-----
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhcC-CCCCCC-----
Confidence 1233458999999999988777655 8999999999999999999975433221 11112221111 110000
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.......+.+|+.+||+.||++|||++|+++.
T Consensus 244 ---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 ---DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00112367899999999999999999999875
No 140
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=351.55 Aligned_cols=269 Identities=19% Similarity=0.212 Sum_probs=201.8
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC----CCcEEEEEEccCccch-----------hHHHHHHHHHHHHhcCCCceee
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVP 665 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~----~g~~vAvK~l~~~~~~-----------~~~~~~~E~~~L~~l~HpnIv~ 665 (927)
++....|.+.+.||+|+||.||+|... ++..+|||++...... ....+.+|+..++.++||||++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 33 DMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp CTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred cccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 344456778899999999999999986 5788999998754321 1134678889999999999999
Q ss_pred eeeeeec----CceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc
Q 002410 666 LIGYCEE----EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 741 (927)
Q Consensus 666 l~~~~~~----~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld 741 (927)
+++++.. ....++||||+ +++|.+++... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred eecccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEc
Confidence 9999877 77899999999 99999999843 379999999999999999999998 8999999999999999
Q ss_pred CCC--cEEEeeccccccccccccc------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 002410 742 INM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 813 (927)
Q Consensus 742 ~~~--~~kL~DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~ 813 (927)
.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 265 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK 265 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 887 9999999999876433211 11344689999999999998999999999999999999999999963222
Q ss_pred cchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 814 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 814 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
. ...... ........ ....+..... ....+..+.+++.+||+.||++||++++|++.|+++..
T Consensus 266 ~-~~~~~~-~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 266 D-PVAVQT-AKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp C-HHHHHH-HHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred c-cHHHHH-HHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1 111111 11111111 0000000000 00123478899999999999999999999999997654
No 141
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.2e-37 Score=343.98 Aligned_cols=263 Identities=26% Similarity=0.431 Sum_probs=200.0
Q ss_pred HHHHHHhhcccccccccEEEEEEEECC----CcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCc-
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH- 674 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~----g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~- 674 (927)
+....|.+.+.||+|+||.||+|.+.. ++.||+|+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 334566778999999999999998652 4589999987542 334577999999999999999999999997655
Q ss_pred ----eEEEEEEecCCCCHHHHhccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEE
Q 002410 675 ----QRILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 747 (927)
Q Consensus 675 ----~~~LV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~k 747 (927)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEE
Confidence 3499999999999999985322 34679999999999999999999998 8999999999999999999999
Q ss_pred Eeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHH
Q 002410 748 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 825 (927)
Q Consensus 748 L~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~ 825 (927)
|+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... .....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~-- 262 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYDYL-- 262 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHH--
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHHHH--
Confidence 999999987644322 12223446889999999999999999999999999999999 889997443322 11111
Q ss_pred hhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 002410 826 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 883 (927)
Q Consensus 826 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~ 883 (927)
..+.... . .......+.+++.+||+.||++||+++|+++.|++++..
T Consensus 263 --~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 263 --LHGHRLK-----Q----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp --HTTCCCC-----C----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HcCCCCC-----C----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111 1 112234688999999999999999999999999998764
No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.7e-37 Score=337.03 Aligned_cols=245 Identities=26% Similarity=0.414 Sum_probs=199.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (279)
T 3fdn_A 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 89 (279)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence 4667899999999999999887 477999999865321 224678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 90 YAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999974 3568999999999999999999998 999999999999999999999999999986644322
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||........ ... +..... ..
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~----~~~~~~------~~- 226 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKR----ISRVEF------TF- 226 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHH----HHHTCC------CC-
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH---HHH----HHhCCC------CC-
Confidence 2234589999999999999999999999999999999999999974432211 111 111110 01
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+......+.+++.+||+.||++||+++|+++.
T Consensus 227 ---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 ---PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11123467899999999999999999999975
No 143
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.3e-37 Score=348.77 Aligned_cols=252 Identities=24% Similarity=0.324 Sum_probs=200.9
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
...|++.+.||+|+||.||++..+ +|+.||||++..... ...+|++++.++ +||||+++++++.+++..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 456778899999999999999987 588999999975432 235688888888 79999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC----CcEEEeeccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 757 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~----~~~kL~DFGla~~~ 757 (927)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||+.++ +.+||+|||+++..
T Consensus 97 ~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 97 LMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999973 4679999999999999999999998 999999999999998432 35999999999876
Q ss_pred cccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+.. .+..+...
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~----~i~~~~~~---- 241 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA----RIGSGKFS---- 241 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH----HHHHCCCC----
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH----HHccCCcc----
Confidence 54322 2233468999999999988889999999999999999999999997433222222222 22222211
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+...........+.+++.+||+.||++||++.|+++.
T Consensus 242 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 --LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp --CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred --cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111111223468899999999999999999999863
No 144
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=353.52 Aligned_cols=258 Identities=29% Similarity=0.455 Sum_probs=197.2
Q ss_pred HhhcccccccccEEEEEEEECC--C--cEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeee-cCceEEEEE
Q 002410 607 NNFCKKIGKGSFGSVYYGKMKD--G--KEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCE-EEHQRILVY 680 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~~--g--~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~-~~~~~~LV~ 680 (927)
+++.+.||+|+||.||+|++.+ + ..||||.++... ....+++.+|+.++++++||||+++++++. .++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 4557899999999999998752 2 368999987543 345678999999999999999999999875 456789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++... ...+++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp ECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred ECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999743 4568899999999999999999998 99999999999999999999999999999875432
Q ss_pred ccc---cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 761 LTH---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 761 ~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+ ..... ..+... .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~----~~~~~~--~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL----LQGRRL--L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH----HTTCCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH----HcCCCC--C
Confidence 211 1223346788999999999999999999999999999999 677776433322 11111 111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
. +...+..+.+++.+||+.||++||+++|+++.|++++..-.
T Consensus 317 ~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 317 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1 11123468899999999999999999999999999887544
No 145
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.4e-37 Score=339.94 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=205.4
Q ss_pred HHhhcc-cccccccEEEEEEEEC---CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 606 TNNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 606 ~~~~~~-~LG~G~~G~Vy~a~~~---~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
.|.+.+ .||+|+||.||+|.+. .++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 455556 8999999999999653 46889999997543 23357899999999999999999999999 55678999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||+++++|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999984 4568999999999999999999998 8999999999999999999999999999987654
Q ss_pred ccccc--ccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 760 DLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 760 ~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .+..+....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~----~~~~~~~~~-- 240 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERMG-- 240 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCCC--
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHH----HHHcCCCCC--
Confidence 33221 122346788999999988889999999999999999999 99999743321 1222 122221111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
.+......+.+++.+||+.||++||++.||++.|+++.....
T Consensus 241 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 241 -------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 111223478899999999999999999999999999887654
No 146
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.4e-38 Score=348.66 Aligned_cols=264 Identities=30% Similarity=0.508 Sum_probs=208.8
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEEC-CCcE--EEEEEccCcc-chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCc
Q 002410 600 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKE--VAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 674 (927)
Q Consensus 600 ~el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~--vAvK~l~~~~-~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~ 674 (927)
+.+....|++.+.||+|+||.||+|+.. +++. +|+|.++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 99 (327)
T 1fvr_A 20 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99 (327)
T ss_dssp SBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred ccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence 3444456778899999999999999876 4554 4999887532 33456789999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc
Q 002410 675 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 741 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld 741 (927)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEc
Confidence 9999999999999999997532 23478999999999999999999998 9999999999999999
Q ss_pred CCCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHH
Q 002410 742 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 820 (927)
Q Consensus 742 ~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~ 820 (927)
.++.+||+|||+++....... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~ 251 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELY 251 (327)
T ss_dssp GGGCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHH
T ss_pred CCCeEEEcccCcCcccccccc--ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH---HHH
Confidence 999999999999875432211 222346889999999988889999999999999999998 99999743321 111
Q ss_pred HHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 821 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 821 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
..+..+... .........+.+++.+||+.||++||+++|+++.|++++...
T Consensus 252 ----~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 252 ----EKLPQGYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp ----HHGGGTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ----HHhhcCCCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 112221110 011122346889999999999999999999999999988754
No 147
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.5e-38 Score=351.40 Aligned_cols=265 Identities=26% Similarity=0.407 Sum_probs=211.9
Q ss_pred HHHHHHhhcccccccccEEEEEEEECC------CcEEEEEEccCccc-hhHHHHHHHHHHHHhc-CCCceeeeeeeeecC
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 673 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~------g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~ 673 (927)
+....|.+.+.||+|+||.||+|.... .+.||+|++..... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 334556778999999999999999753 24799999976533 3457799999999999 899999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSV-----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 742 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~-----------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~ 742 (927)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECC
Confidence 99999999999999999987432 13468999999999999999999998 89999999999999999
Q ss_pred CCcEEEeeccccccccccccc-cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHH
Q 002410 743 NMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 820 (927)
Q Consensus 743 ~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~ 820 (927)
++.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||....... ...
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~ 277 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KFY 277 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HHH
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HHH
Confidence 999999999999876443222 2233446789999999988899999999999999999999 999997443321 111
Q ss_pred HHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 821 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 821 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
..... +.... .+......+.+++.+||+.||.+||+++||++.|+++....
T Consensus 278 ~~~~~----~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 278 KLVKD----GYQMA---------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHH----TCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhc----CCCCC---------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 21111 11000 01112346889999999999999999999999999887653
No 148
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-37 Score=335.69 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=197.7
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56788999999999999999986 58899999987543 23457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc---cCCCcEEEeecccccccc
Q 002410 683 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 683 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFGla~~~~ 758 (927)
+++|+|.+.+.... ....+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999886432 24679999999999999999999998 999999999999999 456789999999998754
Q ss_pred ccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 759 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
.... .....|++.|+|||.+. ..++.++||||||+++|||++|+.||....... ..... ......... ..
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~---~~~~~---~~~~~~~~~-~~ 248 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE---VQQKA---TYKEPNYAV-EC 248 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH---HHCCCCCCC---
T ss_pred Cccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH---HHhhh---ccCCccccc-cc
Confidence 4322 23345899999999986 468899999999999999999999997443221 11111 111100000 00
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 249 ---~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 ---RP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---Cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 1236789999999999999999999985
No 149
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.5e-37 Score=338.05 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=202.5
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
...|.+.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456778899999999999999986 6899999999866555567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc---cCCCcEEEeeccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFGla~~~~~ 759 (927)
+++++|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999874 3568999999999999999999998 899999999999999 7889999999999976543
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 839 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 839 (927)
.. .....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.. .+..+... ....
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~----~i~~~~~~--~~~~ 229 (304)
T 2jam_A 162 GI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---KLFE----KIKEGYYE--FESP 229 (304)
T ss_dssp BT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHH----HHHHCCCC--CCTT
T ss_pred Cc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHH----HHHcCCCC--CCcc
Confidence 21 22345899999999999999999999999999999999999999743321 1111 11111110 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
. .......+.+++.+||+.||++||+++|+++
T Consensus 230 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 F----WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp T----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1122346889999999999999999999986
No 150
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=371.82 Aligned_cols=252 Identities=25% Similarity=0.424 Sum_probs=202.8
Q ss_pred cccccccEEEEEEEEC---CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecCCCC
Q 002410 612 KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 687 (927)
Q Consensus 612 ~LG~G~~G~Vy~a~~~---~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~~gs 687 (927)
.||+|+||.||+|.++ ++..||||+++... ....+++.+|+++|++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 46679999998643 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc--c
Q 002410 688 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI--S 765 (927)
Q Consensus 688 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~--~ 765 (927)
|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......... .
T Consensus 422 L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 99999743 4569999999999999999999998 999999999999999999999999999998765432221 1
Q ss_pred cccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCC
Q 002410 766 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 844 (927)
Q Consensus 766 ~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 844 (927)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ +.+ .+..+.... .
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~---~~~----~i~~~~~~~---------~ 560 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMA----FIEQGKRME---------C 560 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH---HHH----HHHTTCCCC---------C
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH----HHHcCCCCC---------C
Confidence 22335689999999998899999999999999999998 999997443321 222 222222111 1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 845 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 845 ~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
+...+..+.+++.+||+.||++||++++|++.|+++.....
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 12233578899999999999999999999999999876543
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=335.29 Aligned_cols=247 Identities=27% Similarity=0.424 Sum_probs=181.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (278)
T 3cok_A 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE 91 (278)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence 4667889999999999999975 689999999865322 224678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 92 MCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 99999999999842 3578999999999999999999998 899999999999999999999999999998754322
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......... .... .. +...
T Consensus 167 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~-~~------~~~~- 231 (278)
T 3cok_A 167 EK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVV-LA------DYEM- 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CC-SS------CCCC-
T ss_pred Cc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHh-hc------ccCC-
Confidence 21 22345899999999999989999999999999999999999999744322110 0000 00 0011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+......+.+++.+||+.||++||+++|+++
T Consensus 232 ---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 ---PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1112346789999999999999999999985
No 152
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.6e-37 Score=334.95 Aligned_cols=250 Identities=24% Similarity=0.336 Sum_probs=202.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
.|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 86 (284)
T 3kk8_A 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86 (284)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence 4567899999999999999986 58999999986542 33457788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc---EEEeeccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEE 759 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DFGla~~~~~ 759 (927)
+++++|.+.+.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++.....
T Consensus 87 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 87 VTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999998874 4568999999999999999999998 99999999999999986655 99999999977654
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 839 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 839 (927)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..... +..+.... ..+.
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~----~~~~~~~~-~~~~ 230 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQ----IKAGAYDY-PSPE 230 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCCCC-CTTT
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHHH----HHhccccC-Cchh
Confidence 322 22345899999999999999999999999999999999999999743321 11111 11111100 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.......+.+++.+||+.||++|||++|+++.
T Consensus 231 -----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 -----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -----hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 01122468899999999999999999999873
No 153
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.8e-37 Score=335.59 Aligned_cols=258 Identities=24% Similarity=0.313 Sum_probs=205.2
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc------hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
...|++.+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 456788999999999999999987 689999999865322 1357899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC----cEEEeecc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 752 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~----~~kL~DFG 752 (927)
++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999973 4568999999999999999999998 9999999999999998877 89999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 753 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 753 la~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
++........ .....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ... . +.....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~-~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE---TLT---N-ISAVNY 228 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHH---H-HHTTCC
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH---HHH---H-hHhccc
Confidence 9987644322 223458999999999999999999999999999999999999997433211 111 1 111111
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH--HHHhhhh
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDSIK 882 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~--~L~~~~~ 882 (927)
. .++.... .....+.+++.+||+.||++||++.|+++ .++++..
T Consensus 229 ~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 229 D--FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp C--CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred C--Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 0 0111111 11246889999999999999999999997 3555433
No 154
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.8e-37 Score=339.48 Aligned_cols=257 Identities=24% Similarity=0.339 Sum_probs=196.7
Q ss_pred Hhh-cccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEEEec
Q 002410 607 NNF-CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 607 ~~~-~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
|++ .+.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+++..++||||+
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence 444 368999999999999865 6899999999876555667899999999985 7999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc---EEEeecccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEED 760 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DFGla~~~~~~ 760 (927)
++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||++......
T Consensus 94 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 94 RGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred CCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999974 3568999999999999999999998 89999999999999988776 999999998765322
Q ss_pred cc------ccccccccCCCccCCCccCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCcccccch--------hhHHH
Q 002410 761 LT------HISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--------LNIVH 821 (927)
Q Consensus 761 ~~------~~~~~~~gt~~Y~APE~l~~-----~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~--------~~l~~ 821 (927)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. .....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11123358999999999865 5688999999999999999999999975432210 00011
Q ss_pred HHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 822 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 822 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.....+..+... .... ... .....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~i~~~~~~-~~~~-~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYE-FPDK-DWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCC-CCHH-HHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcc-cCch-hcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 111122222110 0000 000 11246889999999999999999999987
No 155
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.3e-38 Score=340.76 Aligned_cols=254 Identities=30% Similarity=0.467 Sum_probs=199.8
Q ss_pred HHHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecC-ceEEEEEEe
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-HQRILVYEY 682 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~-~~~~LV~E~ 682 (927)
...|++.+.||+|+||.||+|+.+ |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 345677899999999999999886 8899999997543 457789999999999999999999987544 578999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++++|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 171 (278)
T ss_dssp CTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred CCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc-
Confidence 9999999999743 12337889999999999999999998 999999999999999999999999999988654322
Q ss_pred ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 763 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ... .+..+.. +..
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~----~~~~~~~-----~~~- 235 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP----RVEKGYK-----MDA- 235 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHH----HHTTTCC-----CCC-
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHhcCCC-----CCC-
Confidence 22346889999999988899999999999999999998 999997443221 111 1111111 111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.......+.+++.+||+.||++||+++|+++.|+++...+
T Consensus 236 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 236 ---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 1122347889999999999999999999999999987644
No 156
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8.1e-38 Score=363.43 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=193.7
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|... +|+.||||+++.. .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 35677899999999999999976 6899999998753 2234466788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .++|+||||||+|||++.++.+||+|||+++.....
T Consensus 228 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 228 EYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred eeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999974 4578999999999999999999995 278999999999999999999999999999864332
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+...+ .. ... .+
T Consensus 303 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i---~~-~~~------~~ 368 (446)
T 4ejn_A 303 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELI---LM-EEI------RF 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH---HH-CCC------CC
T ss_pred Cc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHHH---Hh-CCC------CC
Confidence 22 223456999999999999999999999999999999999999999743321 111111 11 111 01
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~eVl~ 875 (927)
.. .....+.+++.+||+.||++|| +++|+++
T Consensus 369 p~----~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred Cc----cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 1224678999999999999999 9999986
No 157
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.2e-37 Score=344.23 Aligned_cols=247 Identities=29% Similarity=0.397 Sum_probs=199.9
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
...|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 345677889999999999999974 68999999987532 23346789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||++ |+|.+.+... ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 6888887642 4578999999999999999999999 8999999999999999999999999999987543
Q ss_pred cccccccccccCCCccCCCccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 760 DLTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~---~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
. ....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ......... .....
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~------~~~~~~~~~-~~~~~ 274 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNE-SPALQ 274 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCC
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhcC-CCCCC
Confidence 2 2345899999999983 5678999999999999999999999997432211 111111111 11111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
. ......+.+++.+||+.||++|||++|+++.
T Consensus 275 ~--------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 275 S--------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred C--------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 1122467899999999999999999999864
No 158
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-37 Score=353.25 Aligned_cols=250 Identities=26% Similarity=0.356 Sum_probs=194.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHH-HHhcCCCceeeeeeeeecCceEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~-L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
..|++.+.||+|+||.||+|+.+ +++.||||++++... .....+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 45778899999999999999987 588999999976432 234556677776 5678999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999974 4568899999999999999999998 9999999999999999999999999999986433
Q ss_pred cccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccc
Q 002410 760 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 839 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 839 (927)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ... ..... ... .
T Consensus 192 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~---~~i~~-~~~------~ 257 (373)
T 2r5t_A 192 HNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EMY---DNILN-KPL------Q 257 (373)
T ss_dssp CCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH---HHH---HHHHH-SCC------C
T ss_pred CCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---HHH---HHHHh-ccc------C
Confidence 221 233456999999999999999999999999999999999999999743321 111 11111 111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 002410 840 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQ 878 (927)
Q Consensus 840 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~ 878 (927)
+... ....+.+++.+||+.||++||++.+.++.+.
T Consensus 258 ~~~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 258 LKPN----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp CCSS----SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred CCCC----CCHHHHHHHHHHcccCHHhCCCCCCCHHHHh
Confidence 1111 2236789999999999999999865544444
No 159
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.5e-37 Score=350.06 Aligned_cols=249 Identities=22% Similarity=0.328 Sum_probs=195.8
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--chhHHHHHHHHHHHHhcC--CCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~--HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+++|++++ ||||+++++++..++..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 467789999999999999999889999999986532 345578999999999996 5999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
+.+++|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++ ++.+||+|||+++......
T Consensus 137 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp -CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred -cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 668899999984 4578899999999999999999998 9999999999999995 6899999999998765433
Q ss_pred cc-cccccccCCCccCCCccCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhc
Q 002410 762 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 829 (927)
Q Consensus 762 ~~-~~~~~~gt~~Y~APE~l~~-----------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 829 (927)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .. ......+..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--~~---~~~~~~~~~ 283 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QI---SKLHAIIDP 283 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC--HH---HHHHHHHCT
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH--HH---HHHHHHhCc
Confidence 22 2334569999999999864 4688999999999999999999999973221 11 111111111
Q ss_pred CCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 830 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 830 ~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
... ...+......+.+++.+||+.||++||+++|+++.
T Consensus 284 ~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 284 NHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccc---------CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111 01111112467899999999999999999999864
No 160
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.6e-37 Score=336.20 Aligned_cols=247 Identities=23% Similarity=0.356 Sum_probs=203.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEe
Confidence 4566899999999999999987 47899999986532 3345778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 96 LCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp CCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred cCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999873 4578999999999999999999998 899999999999999999999999999998764322
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 841 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 841 (927)
.. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+. ... +..... .+.
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------~~~-~~~~~~------~~~ 235 (294)
T 2rku_A 170 ER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------YLR-IKKNEY------SIP 235 (294)
T ss_dssp CC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHH-HHTTCC------CCC
T ss_pred cc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHH-HhhccC------CCc
Confidence 22 2334589999999999998999999999999999999999999974332211 111 111111 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 842 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 842 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
. .....+.+++.+||+.||++||+++|+++.
T Consensus 236 ~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 K----HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp T----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c----ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 122367899999999999999999999874
No 161
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.2e-37 Score=358.89 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=202.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|.+.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E 96 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4667899999999999999987 699999999975321 234678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 97 ~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 97 YVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999973 4679999999999999999999998 999999999999999999999999999998765432
Q ss_pred cccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+.. .+..+... .
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~----~i~~~~~~------~ 235 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLFK----KICDGIFY------T 235 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---HHHH----HHHTTCCC------C
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---HHHH----HHhcCCcC------C
Confidence 2234468999999999988765 78999999999999999999999744322 1111 11122110 0
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+......+.+++.+||+.||++|||++|+++
T Consensus 236 ----p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 236 ----PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 0111236789999999999999999999987
No 162
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.4e-37 Score=346.52 Aligned_cols=261 Identities=18% Similarity=0.250 Sum_probs=192.2
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch--hHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~--~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
..|++.++||+|+||+||+|+.. +++.||||+++..... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (329)
T 3gbz_A 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113 (329)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEe
Confidence 35777899999999999999876 6899999999754322 34567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc-----CCCcEEEeecccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-----INMRAKVSDFGLSRQ 756 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld-----~~~~~kL~DFGla~~ 756 (927)
|++ |+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||+++.
T Consensus 114 ~~~-~~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 114 YAE-NDLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CCS-EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred cCC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 997 599999974 4568999999999999999999999 9999999999999994 555699999999987
Q ss_pred ccccccccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhh--hcCCee
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI--KKGDVI 833 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~--~~~~~~ 833 (927)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+........ ......
T Consensus 187 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 187 FGIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID--QLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCTTTST
T ss_pred cCCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH--HHHHHHHHhCCCchhhhh
Confidence 6433222 2234579999999999774 58999999999999999999999997443221 1111111100 000000
Q ss_pred eec--------cccccCC-----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 834 SIV--------DPVLIGN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 834 ~~~--------d~~l~~~-----~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
... .+..... ........+.+|+.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0000000 00112346789999999999999999999985
No 163
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.4e-37 Score=333.68 Aligned_cols=248 Identities=24% Similarity=0.372 Sum_probs=197.8
Q ss_pred cccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecCCCCH
Q 002410 610 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 688 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~~gsL 688 (927)
...||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||+++++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 358999999999999975 6889999999876666678899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC-CCcEEEeeccccccccccccccccc
Q 002410 689 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-NMRAKVSDFGLSRQAEEDLTHISSV 767 (927)
Q Consensus 689 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~-~~~~kL~DFGla~~~~~~~~~~~~~ 767 (927)
.+++........+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||++........ ....
T Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 182 (295)
T 2clq_A 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTET 182 (295)
T ss_dssp HHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-cccc
Confidence 9999865445567889999999999999999998 99999999999999987 89999999999987543221 1233
Q ss_pred cccCCCccCCCccCCC--CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCC
Q 002410 768 ARGTVGYLDPEYYGNQ--QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 845 (927)
Q Consensus 768 ~~gt~~Y~APE~l~~~--~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 845 (927)
..|++.|+|||++.+. .++.++||||||+++|||++|+.||........ .... ..... ..+.+ +
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~---~~~~~------~~~~~----~ 248 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFK---VGMFK------VHPEI----P 248 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-HHHH---HHHHC------CCCCC----C
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-HHHh---hcccc------ccccc----c
Confidence 4589999999998664 378999999999999999999999973322111 1111 10100 01111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 846 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 846 ~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
......+.+++.+||+.||++||+++|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 122346789999999999999999999985
No 164
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.3e-37 Score=346.31 Aligned_cols=267 Identities=27% Similarity=0.454 Sum_probs=209.2
Q ss_pred hhHHHHHHhhcccccccccEEEEEEEEC------CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeec
Q 002410 600 PELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE 672 (927)
Q Consensus 600 ~el~~~~~~~~~~LG~G~~G~Vy~a~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~ 672 (927)
+++....|++.+.||+|+||.||+|++. +++.||||++.... .....++.+|+.++++++||||+++++++.+
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104 (327)
T ss_dssp CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence 3455667788999999999999999842 47789999997543 3455679999999999999999999999999
Q ss_pred CceEEEEEEecCCCCHHHHhccCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC---CCc
Q 002410 673 EHQRILVYEYMHNGTLRDRLHGSVN----QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMR 745 (927)
Q Consensus 673 ~~~~~LV~E~~~~gsL~~~L~~~~~----~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---~~~ 745 (927)
.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++. +..
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCC
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcce
Confidence 9999999999999999999986431 2458999999999999999999998 99999999999999984 446
Q ss_pred EEEeecccccccccccc-ccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHH
Q 002410 746 AKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWA 823 (927)
Q Consensus 746 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~ 823 (927)
+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...+.
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~- 257 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEF- 257 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHH-
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH---HHHHH-
Confidence 99999999876433221 12233457889999999988899999999999999999998 99999743221 12221
Q ss_pred HHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 824 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 824 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
+..+.... . .......+.+++.+||+.||++||++.||++.|+.+.....
T Consensus 258 ---~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 258 ---VTSGGRMD-----P----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp ---HHTTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ---HhcCCCCC-----C----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 11111111 1 11123468899999999999999999999999998876443
No 165
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.9e-37 Score=345.51 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=198.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
.|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 4667899999999999999987 489999999865432 3346688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccc
Q 002410 683 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 762 (927)
Q Consensus 683 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~ 762 (927)
+++++|.+++. ....+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.......
T Consensus 106 ~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 106 VDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999998876 34569999999999999999999998 9999999999999999999999999999987544322
Q ss_pred ccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH----------hhhcCC
Q 002410 763 HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS----------MIKKGD 831 (927)
Q Consensus 763 ~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~----------~~~~~~ 831 (927)
......|++.|+|||++.+. .++.++|||||||++|||++|+.||......+. +...... ......
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ--LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhhhHhhhcc
Confidence 22234589999999998775 789999999999999999999999975433221 1111100 000000
Q ss_pred -eeeeccccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 832 -VISIVDPVLIGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 832 -~~~~~d~~l~~~~-----~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
......+.+.... .......+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000001111000 11234578899999999999999999998863
No 166
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2e-37 Score=349.52 Aligned_cols=267 Identities=22% Similarity=0.304 Sum_probs=204.8
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEE
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~L 678 (927)
++....|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 344456777899999999999999987 68999999997653 3445779999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+ + +|+||||||+|||++.++.+||+|||++...
T Consensus 109 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp EECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred EEECCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 9999999999999974 3568999999999999999999998 5 8999999999999999999999999998765
Q ss_pred cccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH-hh--------h
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS-MI--------K 828 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~-~~--------~ 828 (927)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+............. .. .
T Consensus 183 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3eqc_A 183 IDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 259 (360)
T ss_dssp HHHC-------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred cccc---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence 3321 2234689999999999999999999999999999999999999974432211100000000 00 0
Q ss_pred --------------cCCeeeecc----ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 829 --------------KGDVISIVD----PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 829 --------------~~~~~~~~d----~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.....+..+ ..............+.+++.+||+.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000 000000011123468899999999999999999999874
No 167
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=345.38 Aligned_cols=242 Identities=23% Similarity=0.323 Sum_probs=200.8
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--------hhHHHHHHHHHHHHhcCCCceeeeeeeeecCc
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 674 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~ 674 (927)
...|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 456778899999999999999875 688999999875421 13346778999999999999999999999999
Q ss_pred eEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccc
Q 002410 675 QRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 753 (927)
Q Consensus 675 ~~~LV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGl 753 (927)
..++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 999999999777 99999983 4579999999999999999999998 8999999999999999999999999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 754 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 754 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ... ..
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------------~~~-~~- 240 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------------TVE-AA- 240 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------------GTT-TC-
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------------HHh-hc-
Confidence 987654322 223458999999999988776 8899999999999999999999973211 000 00
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
..+ +......+.+++.+||+.||++|||++|+++.
T Consensus 241 ---~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 ---IHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---CCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---cCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00122368899999999999999999999985
No 168
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=349.26 Aligned_cols=254 Identities=26% Similarity=0.355 Sum_probs=203.2
Q ss_pred HHHhhcccccccccEEEEEEEE----CCCcEEEEEEccCcc----chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCce
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 675 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~ 675 (927)
..|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4577789999999999999998 368999999987532 22345677899999999 69999999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999974 3568999999999999999999998 899999999999999999999999999998
Q ss_pred cccccccccccccccCCCccCCCccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCee
Q 002410 756 QAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 833 (927)
Q Consensus 756 ~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 833 (927)
..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ...........
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~--- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRILKSE--- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHHHCC---
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH--HHHHHHHhccC---
Confidence 765444434444569999999999975 35789999999999999999999999744332211 11112211110
Q ss_pred eeccccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHHH
Q 002410 834 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLAI 877 (927)
Q Consensus 834 ~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~eVl~~L 877 (927)
+. .+......+.+++.+||+.||++|| +++|+++..
T Consensus 283 ----~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11 1112234678999999999999999 999988753
No 169
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-37 Score=352.12 Aligned_cols=264 Identities=25% Similarity=0.328 Sum_probs=192.1
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcC-CCceeeeeeeeecC--ce
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEE--HQ 675 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~~--~~ 675 (927)
.....|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.+++++. ||||+++++++... ..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 33456778899999999999999876 6899999998653 2345567889999999997 99999999998654 37
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
.++||||++ |+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999997 689999873 468999999999999999999998 999999999999999999999999999998
Q ss_pred cccccc--------------------cccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 002410 756 QAEEDL--------------------THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFG 814 (927)
Q Consensus 756 ~~~~~~--------------------~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~ 814 (927)
...... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 653211 111233468999999999876 67899999999999999999999999754432
Q ss_pred chhhHHHHHHHhhhcCCeeee---c------------------cccccCC------------CCHHHHHHHHHHHHHhhc
Q 002410 815 AELNIVHWARSMIKKGDVISI---V------------------DPVLIGN------------VKIESIWRIAEVAIQCVE 861 (927)
Q Consensus 815 ~~~~l~~~~~~~~~~~~~~~~---~------------------d~~l~~~------------~~~~~~~~l~~Li~~Cl~ 861 (927)
+.. ..+...+.......+ . ....... ........+.+|+.+||+
T Consensus 238 ~~~---~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 238 NQL---ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp HHH---HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred HHH---HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 211 111111110000000 0 0000000 000123468899999999
Q ss_pred cCCCCCCCHHHHHHH
Q 002410 862 QRGFSRPKMQEIVLA 876 (927)
Q Consensus 862 ~dP~~RPs~~eVl~~ 876 (927)
.||++|||++|+++.
T Consensus 315 ~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 315 FNPNKRISANDALKH 329 (388)
T ss_dssp SSGGGSCCHHHHTTS
T ss_pred cCcccCCCHHHHhCC
Confidence 999999999999875
No 170
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.6e-37 Score=372.42 Aligned_cols=249 Identities=27% Similarity=0.460 Sum_probs=200.0
Q ss_pred ccccccccEEEEEEEEC---CCcEEEEEEccCccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecCC
Q 002410 611 KKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 685 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~---~g~~vAvK~l~~~~~--~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~~ 685 (927)
++||+|+||.||+|.+. .++.||||+++.... ...+++.+|+++|++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999764 467899999976432 335789999999999999999999999965 458899999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccc--
Q 002410 686 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH-- 763 (927)
Q Consensus 686 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~-- 763 (927)
|+|.+++.. ...+++..++.|+.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999973 4678999999999999999999998 99999999999999999999999999999876543221
Q ss_pred cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccC
Q 002410 764 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 842 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 842 (927)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.+ .+..+....
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~----~i~~~~~~~-------- 592 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERMG-------- 592 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCCC--------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCCC--------
Confidence 2223346788999999998899999999999999999998 99999744322 1111 222222111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 002410 843 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 882 (927)
Q Consensus 843 ~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~ 882 (927)
.+...+..+.+++.+||+.||++||++++|++.|+++..
T Consensus 593 -~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 -CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 111233578899999999999999999999999998754
No 171
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.3e-36 Score=331.97 Aligned_cols=245 Identities=29% Similarity=0.436 Sum_probs=196.1
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeec----CceEEEE
Q 002410 607 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 679 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~----~~~~~LV 679 (927)
+.+.+.||+|+||.||+|... ++..||+|++... .....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 456778999999999999886 5789999998753 23456779999999999999999999998764 4568999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCccccc-CCCcEEEeecccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQ 756 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~--ivH~DLkp~NILld-~~~~~kL~DFGla~~ 756 (927)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+ |+||||||+||+++ .++.+||+|||++..
T Consensus 108 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999974 3568999999999999999999998 77 99999999999997 789999999999976
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
..... .....|++.|+|||++.+ .++.++|||||||++|+|++|+.||...... ..... .+..+......
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~----~~~~~~~~~~~ 251 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYR----RVTSGVKPASF 251 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHHH----HHTTTCCCGGG
T ss_pred ccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH--HHHHH----HHhccCCcccc
Confidence 44322 223458999999998874 5899999999999999999999999743221 11111 11111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+. .....+.+++.+||+.||++|||++|+++
T Consensus 252 ~~--------~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DK--------VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GG--------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC--------CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 11236889999999999999999999986
No 172
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=347.96 Aligned_cols=259 Identities=21% Similarity=0.311 Sum_probs=193.8
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch-hHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEecC
Q 002410 607 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~-~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
|.+.+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 566789999999999999987 6899999998754322 12245679999999999999999999999999999999997
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 764 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~ 764 (927)
|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 84 -~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~- 156 (324)
T 3mtl_A 84 -KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT- 156 (324)
T ss_dssp -EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred -cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc-
Confidence 5899988753 4568999999999999999999998 99999999999999999999999999999865433222
Q ss_pred ccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhc---CCeeeeccc--
Q 002410 765 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK---GDVISIVDP-- 838 (927)
Q Consensus 765 ~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~---~~~~~~~d~-- 838 (927)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+...... .........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ---LHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHhchhhhcchh
Confidence 223457999999999876 5789999999999999999999999975443222 1212111111 001000000
Q ss_pred -------cccC----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 839 -------VLIG----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 839 -------~l~~----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.... .........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000 000112346789999999999999999999987
No 173
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-36 Score=355.20 Aligned_cols=260 Identities=22% Similarity=0.285 Sum_probs=194.0
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecC------ceE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 676 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~------~~~ 676 (927)
.|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|+++++.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 4667899999999999999876 5899999999754 334457789999999999999999999998654 467
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 143 YLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999976 4666664 238899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHH-HH-------------
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV-HW------------- 822 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~-~~------------- 822 (927)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+..... +.
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 65432 223456899999999999999999999999999999999999999855432211111 00
Q ss_pred --HHHhhhcCC------eeeeccccccCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 823 --ARSMIKKGD------VISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 823 --~~~~~~~~~------~~~~~d~~l~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.+....... ........+.... .......+.+|+.+||+.||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000000000000 01124578999999999999999999999874
No 174
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.8e-37 Score=334.40 Aligned_cols=246 Identities=20% Similarity=0.286 Sum_probs=199.4
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEE
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~L 678 (927)
....|++.+.||+|+||.||+|... +++.||+|++... ......++.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467788899999999999999987 7999999998753 234557788999999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC--------------
Q 002410 679 VYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------- 743 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~-------------- 743 (927)
||||+++++|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997532 12568999999999999999999998 999999999999999844
Q ss_pred -----CcEEEeeccccccccccccccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchh
Q 002410 744 -----MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL 817 (927)
Q Consensus 744 -----~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~ 817 (927)
..+||+|||++....... ...||+.|+|||.+.+. .++.++|||||||++|||++|..|+....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----- 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----- 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence 479999999998765432 23489999999999765 66789999999999999999998775221
Q ss_pred hHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 818 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 818 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
... .+..+.... +... ....+.+++.+||+.||++||+++|+++
T Consensus 236 ~~~-----~~~~~~~~~-----~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 QWH-----EIRQGRLPR-----IPQV----LSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHH-----HHHTTCCCC-----CSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH-----HHHcCCCCC-----CCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111 111222111 1111 2246889999999999999999999985
No 175
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.5e-37 Score=333.26 Aligned_cols=245 Identities=24% Similarity=0.365 Sum_probs=202.0
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 35677899999999999999987 57889999986532 122467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 94 EFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999974 3468999999999999999999998 99999999999999999999999999998765432
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ .. .. +..... .+
T Consensus 168 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~---~~-~~~~~~------~~ 231 (284)
T 2vgo_A 168 R---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE---TH---RR-IVNVDL------KF 231 (284)
T ss_dssp C---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---HH---HH-HHTTCC------CC
T ss_pred c---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH---HH---HH-Hhcccc------CC
Confidence 2 223458999999999999999999999999999999999999997433211 11 11 111111 11
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+......+.+++.+||+.||++||+++|+++
T Consensus 232 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 232 ----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1112346789999999999999999999986
No 176
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.4e-37 Score=362.10 Aligned_cols=251 Identities=25% Similarity=0.315 Sum_probs=204.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.+++.+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+++|++++||||+++++++.+.+..++|||
T Consensus 185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE 264 (576)
T 2acx_A 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 264 (576)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEE
Confidence 3556789999999999999986 69999999986532 2234668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 265 y~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 265 LMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred cCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999753 24458999999999999999999998 999999999999999999999999999998765432
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccch-hhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+... +..... ..
T Consensus 341 ~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~----i~~~~~------~~ 408 (576)
T 2acx_A 341 T--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL----VKEVPE------EY 408 (576)
T ss_dssp C--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH----HHHCCC------CC
T ss_pred c--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH----hhcccc------cC
Confidence 2 2234699999999999999999999999999999999999999985443211 112221 111110 01
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 876 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----s~~eVl~~ 876 (927)
+......+.+|+.+||+.||++|| +++||++.
T Consensus 409 ----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 409 ----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 111224688999999999999999 78888754
No 177
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2e-37 Score=336.08 Aligned_cols=253 Identities=26% Similarity=0.377 Sum_probs=201.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeee--cCceEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILVY 680 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~--~~~~~~LV~ 680 (927)
.|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 4567899999999999999987 68999999997532 344577999999999999999999999874 467899999
Q ss_pred EecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCcccccCCCcEEEeecccc
Q 002410 681 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG-----IIHRDVKSSNILLDINMRAKVSDFGLS 754 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~-----ivH~DLkp~NILld~~~~~kL~DFGla 754 (927)
||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||++
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 9999999999997532 34558999999999999999999998 67 999999999999999999999999999
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
+....... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+.. .+..+....
T Consensus 164 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~----~i~~~~~~~ 235 (279)
T 2w5a_A 164 RILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAG----KIREGKFRR 235 (279)
T ss_dssp HHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHH----HHHHTCCCC
T ss_pred eeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHHHH----HHhhccccc
Confidence 87644322 12234589999999999988999999999999999999999999974332 11211 222222211
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQ 878 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~ 878 (927)
+. ......+.+++.+||+.||++||+++||++.+.
T Consensus 236 -----~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 -----IP----YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----CC----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 11 122346889999999999999999999998654
No 178
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.7e-37 Score=341.02 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=203.8
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
..|.+.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 35667899999999999999987 47899999986532 345577899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++++|.+++.. ...+++.+++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 121 ELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp CCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999873 4578999999999999999999998 89999999999999999999999999999876433
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
.. ......|++.|+|||++.+..++.++||||||+++|||++|+.||......+. .. . +..... .+
T Consensus 195 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~---~-~~~~~~------~~ 260 (335)
T 2owb_A 195 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET---YL---R-IKKNEY------SI 260 (335)
T ss_dssp TC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HH---H-HHHTCC------CC
T ss_pred cc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH---HH---H-HhcCCC------CC
Confidence 22 22334589999999999988899999999999999999999999974332111 11 1 111111 01
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
... ....+.+++.+||+.||++||+++|+++.
T Consensus 261 ~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 PKH----INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CTT----SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred Ccc----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 12367899999999999999999999873
No 179
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.6e-37 Score=335.13 Aligned_cols=247 Identities=29% Similarity=0.433 Sum_probs=204.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEec
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 3566789999999999999876 68999999987543 344678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 763 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~ 763 (927)
++++|.+++. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 103 ~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 103 GGGSALDLLE----PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp TTEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 9999999986 3568999999999999999999998 9999999999999999999999999999987654322
Q ss_pred cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCC
Q 002410 764 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 843 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 843 (927)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ..... +..+.. +.+...
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~----~~~~~~-----~~~~~~ 242 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM---KVLFL----IPKNNP-----PTLEGN 242 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH---HHHHH----HHHSCC-----CCCCSS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH---HHHHH----hhcCCC-----CCCccc
Confidence 223345899999999999999999999999999999999999999743221 11111 111111 111112
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 844 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 844 ~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+ ...+.+++.+||+.||++||+++|+++.
T Consensus 243 ~----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 243 Y----SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp C----CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred c----CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 2 2368899999999999999999999875
No 180
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=343.46 Aligned_cols=254 Identities=16% Similarity=0.165 Sum_probs=205.1
Q ss_pred HHHHhhcccccccccEEEEEEE------ECCCcEEEEEEccCccchhHHHHHHHHHHHHhcC---CCceeeeeeeeecCc
Q 002410 604 EATNNFCKKIGKGSFGSVYYGK------MKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEH 674 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~------~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~---HpnIv~l~~~~~~~~ 674 (927)
...|.+.+.||+|+||.||+|. ..+++.||||+++... ..++.+|++++++++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 3456678899999999999994 4468899999997543 456777888888886 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC----------
Q 002410 675 QRILVYEYMHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---------- 742 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---------- 742 (927)
..++||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+ ++|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccccc
Confidence 9999999999999999997422 35679999999999999999999998 99999999999999998
Q ss_pred -CCcEEEeecccccccccc-ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHH
Q 002410 743 -NMRAKVSDFGLSRQAEED-LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 820 (927)
Q Consensus 743 -~~~~kL~DFGla~~~~~~-~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~ 820 (927)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 899999999999765322 1222344569999999999999999999999999999999999999996322210
Q ss_pred HHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCC-CCHHHHHHHHHhhhhhc
Q 002410 821 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR-PKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 821 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~R-Ps~~eVl~~L~~~~~~e 884 (927)
..+...+.... ....+.+++..|++.+|.+| |+++++.+.|++.+...
T Consensus 293 -------------~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 -------------CKPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -------------EEECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------eeechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00111111111 13467789999999999998 68999999999888753
No 181
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.6e-37 Score=339.87 Aligned_cols=259 Identities=21% Similarity=0.254 Sum_probs=203.8
Q ss_pred hhhHHHHHHhhc-ccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhc-CCCceeeeeeeeecC
Q 002410 599 LPELEEATNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 673 (927)
Q Consensus 599 ~~el~~~~~~~~-~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~ 673 (927)
..+.....|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++ +||||+++++++.+.
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 345555666665 88999999999999987 58999999987643 23357889999999999 469999999999999
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC---CCcEEEee
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSD 750 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~D 750 (927)
+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++. ++.+||+|
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEee
Confidence 9999999999999999998643 34679999999999999999999998 99999999999999987 78999999
Q ss_pred ccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcC
Q 002410 751 FGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 830 (927)
Q Consensus 751 FGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~ 830 (927)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... ...+.. .
T Consensus 178 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~----~ 248 (327)
T 3lm5_A 178 FGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET---YLNISQ----V 248 (327)
T ss_dssp GGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHH----T
T ss_pred CccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHHHh----c
Confidence 999987654322 2234589999999999999999999999999999999999999974432211 111111 1
Q ss_pred CeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 831 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 831 ~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
... ............+.+++.+||+.||++|||++|+++.
T Consensus 249 ~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 249 NVD------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCC------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccc------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000 0001111223468899999999999999999999864
No 182
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.1e-36 Score=346.43 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=188.4
Q ss_pred ccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHh-cCCCceeeeeeeeec----CceEEEEEEecC
Q 002410 611 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSR-IHHRNLVPLIGYCEE----EHQRILVYEYMH 684 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~-l~HpnIv~l~~~~~~----~~~~~LV~E~~~ 684 (927)
+.||+|+||+||+|..+ +|+.||||+++.. ..+.+|++++.+ .+||||+++++++.. .+..++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999987 5899999998642 456788888754 489999999998865 667899999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC---CCcEEEeeccccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFGla~~~~~~~ 761 (927)
+|+|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 99999999853 24569999999999999999999998 99999999999999987 7899999999998654322
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccch-hhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...... +..+... ...+ .
T Consensus 219 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----i~~~~~~-~~~~-~ 290 (400)
T 1nxk_A 219 S--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYE-FPNP-E 290 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH----HHHTCCC-CCTT-T
T ss_pred c--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH----HHcCccc-CCCc-c
Confidence 1 2344589999999999999999999999999999999999999974433211 111111 1111110 0000 0
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.......+.+|+.+||+.||++|||++|+++.
T Consensus 291 ----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 291 ----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01123468899999999999999999999975
No 183
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-37 Score=342.68 Aligned_cols=263 Identities=20% Similarity=0.214 Sum_probs=197.6
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch-----hHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-----RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~-----~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
...|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 356778899999999999999986 5899999998753221 1246889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+||||+++ +|.+++... ...+++..+..++.|+++||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 89 lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 99999985 898888742 4568889999999999999999998 99999999999999999999999999999876
Q ss_pred cccccccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhc---CCee
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK---GDVI 833 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~---~~~~ 833 (927)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|..||......+ .+..... .... ....
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~--~~~~i~~-~~~~~~~~~~~ 238 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD--QLTRIFE-TLGTPTEEQWP 238 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCTTTSS
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHH-HcCCCChhhhh
Confidence 44322 22334589999999998654 58999999999999999999999997443221 1111111 1110 0000
Q ss_pred ee------ccccccCCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 834 SI------VDPVLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 834 ~~------~d~~l~~~~~-----~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.. +........+ ......+.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000000000 1223578899999999999999999999874
No 184
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.7e-37 Score=343.00 Aligned_cols=265 Identities=20% Similarity=0.259 Sum_probs=198.6
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeec--------C
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--------E 673 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~--------~ 673 (927)
..|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 35777899999999999999985 689999999865432 234678899999999999999999999876 4
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccc
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 753 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGl 753 (927)
+..++||||+++ +|.+.+... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 568999999975 777777643 3569999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccc---cccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhc
Q 002410 754 SRQAEEDL---THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 829 (927)
Q Consensus 754 a~~~~~~~---~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~ 829 (927)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....................
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 98754322 112233458999999999876 46899999999999999999999999854432222211111111111
Q ss_pred CCeeeecccccc--------CCCCH-HH------HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 830 GDVISIVDPVLI--------GNVKI-ES------IWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 830 ~~~~~~~d~~l~--------~~~~~-~~------~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
......-..... ..... +. ...+.+|+.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000000000000 00000 00 235789999999999999999999986
No 185
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.6e-37 Score=334.40 Aligned_cols=260 Identities=28% Similarity=0.422 Sum_probs=197.9
Q ss_pred HHHHhhcccccccccEEEEEEEEC--CCc--EEEEEEccCc---cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK--DGK--EVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~--~g~--~vAvK~l~~~---~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
...|++.+.||+|+||.||+|++. +++ .||||+++.. .....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 345778899999999999999864 233 6899998754 2345678999999999999999999999998765 8
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++|+||+++++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 8999999999999999753 3568999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccc--cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCee
Q 002410 757 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 833 (927)
Q Consensus 757 ~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 833 (927)
....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~---~~~~~~~~~ 244 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---QILH---KIDKEGERL 244 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHH---HHHTSCCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH---HHHH---HHHccCCCC
Confidence 6543221 1223447788999999988889999999999999999999 99999743321 1111 111111110
Q ss_pred eeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 834 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 834 ~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
. ........+.+++.+||+.||++||+++|+++.|+++....
T Consensus 245 ~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 245 P---------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp C---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred C---------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0 01122347889999999999999999999999999887543
No 186
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.9e-37 Score=330.36 Aligned_cols=246 Identities=24% Similarity=0.392 Sum_probs=194.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4667899999999999999987 69999999986532 2234678999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 92 YVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred ccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999974 3568999999999999999999998 899999999999999999999999999998765432
Q ss_pred cccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
. .....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... ...+ .+..+.. .+
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~------~~ 230 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP---TLFK----KIRGGVF------YI 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCC------CC
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---HHHH----HhhcCcc------cC
Confidence 1 223458999999999987765 68999999999999999999999743221 1111 1111111 01
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+......+.+++.+||+.||++||+++|+++.
T Consensus 231 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11122467899999999999999999999874
No 187
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.9e-37 Score=352.61 Aligned_cols=254 Identities=24% Similarity=0.336 Sum_probs=193.2
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--------hhHHHHHHHHHHHHhcCCCceeeeeeeee
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 671 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~L~~l~HpnIv~l~~~~~ 671 (927)
+.....|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+++|++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 445567888999999999999999876 589999999865321 12235889999999999999999999986
Q ss_pred cCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC---cEEE
Q 002410 672 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKV 748 (927)
Q Consensus 672 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~---~~kL 748 (927)
. +..++||||+++|+|.+++. ....+++..+..++.|++.||+|||+ ++|+||||||+|||++.++ .+||
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred c-CceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEE
Confidence 5 45799999999999999887 35679999999999999999999998 8999999999999997544 5999
Q ss_pred eeccccccccccccccccccccCCCccCCCccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH
Q 002410 749 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 825 (927)
Q Consensus 749 ~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 825 (927)
+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+..
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~---- 355 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD---- 355 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHH----
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHH----
Confidence 9999998765432 2234568999999999853 577889999999999999999999997433221 1111
Q ss_pred hhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 826 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 826 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.+..+.... .+.... .....+.+++.+||+.||++||+++|+++
T Consensus 356 ~i~~~~~~~--~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 QITSGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHTTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhcCCCCC--Cchhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111111110 001111 12346889999999999999999999986
No 188
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.6e-36 Score=351.65 Aligned_cols=262 Identities=21% Similarity=0.289 Sum_probs=207.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCC-CceeeeeeeeecCceEEEEEEec
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~H-pnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
.|++.++||+|+||.||+|++. +++.||||++..... ..++.+|+++++.++| +++..+..++...+..++||||+
T Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4667899999999999999975 689999998765432 2457889999999976 55666666677788899999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc---cCCCcEEEeecccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFGla~~~~~~ 760 (927)
+++|.+++... ...+++..++.|+.||+.||+|||+ ++|+||||||+|||| +.++.+||+|||+++.....
T Consensus 86 -g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 -GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999999743 4569999999999999999999998 999999999999999 68899999999999876543
Q ss_pred ccc------cccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 761 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 761 ~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+...........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 321 12245699999999999999999999999999999999999999986544333332222222111111111
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
+... .+.++.+++.+||+.+|++||++++|++.|++++..+
T Consensus 240 -----l~~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 240 -----LCRG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -----HHTT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----HhcC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1111 1247889999999999999999999999999987654
No 189
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.7e-37 Score=335.85 Aligned_cols=251 Identities=20% Similarity=0.358 Sum_probs=197.8
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEec
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
..|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 34667899999999999999987 58999999998765566788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 763 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~ 763 (927)
++++|.+++... ...+++..+..++.||+.||+|||+ ++++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 172 (302)
T 2j7t_A 99 PGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ- 172 (302)
T ss_dssp TTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-
T ss_pred CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-
Confidence 999999988742 4568999999999999999999998 8999999999999999999999999998764322111
Q ss_pred cccccccCCCccCCCcc-----CCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 764 ISSVARGTVGYLDPEYY-----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l-----~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
......|++.|+|||++ .+..++.++||||||+++|||++|+.||....... . ....... .......
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~---~~~~~~~-~~~~~~~- 244 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---V---LLKIAKS-DPPTLLT- 244 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H---HHHHHHS-CCCCCSS-
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH---H---HHHHhcc-CCcccCC-
Confidence 11234589999999998 46778999999999999999999999997433211 1 1111111 1111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+......+.+++.+||+.||++|||++|+++
T Consensus 245 ------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 ------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1122346889999999999999999999875
No 190
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-36 Score=353.83 Aligned_cols=191 Identities=26% Similarity=0.388 Sum_probs=153.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeec-----CceEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-----EHQRI 677 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~-----~~~~~ 677 (927)
.|++.+.||+|+||+||+|+.+ +++.||||++... .....+++.+|+++|++++||||+++++++.. ....+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 5777899999999999999876 6899999998653 23345789999999999999999999999843 35789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+||||+ +|+|.+++. ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 134 lv~e~~-~~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEECCC-SEEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEecc-ccchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 999998 579999987 35679999999999999999999999 99999999999999999999999999999876
Q ss_pred ccccc--------------------------ccccccccCCCccCCCcc-CCCCCCcchhHHHHHHHHHHHHh
Q 002410 758 EEDLT--------------------------HISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELIS 803 (927)
Q Consensus 758 ~~~~~--------------------------~~~~~~~gt~~Y~APE~l-~~~~~s~ksDVwSlGvlL~eLlt 803 (927)
..... .......||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 43211 112234689999999976 56679999999999999999999
No 191
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=334.25 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=199.5
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
.....|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34456777899999999999999987 58999999987542 3467899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 104 e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 104 EYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp ECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 99999999999863 24578999999999999999999998 99999999999999999999999999999876543
Q ss_pred ccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccc
Q 002410 761 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ... . +..........
T Consensus 179 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~-~~~~~~~~~~~--- 247 (314)
T 3com_A 179 MAK-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR---AIF---M-IPTNPPPTFRK--- 247 (314)
T ss_dssp BSC-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH---H-HHHSCCCCCSS---
T ss_pred ccc-cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH---HHH---H-HhcCCCcccCC---
Confidence 222 233458999999999999999999999999999999999999997432211 111 1 11111111111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.......+.+++.+||+.||++||+++|+++
T Consensus 248 ----~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 ----PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ----GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1112346889999999999999999999986
No 192
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.3e-36 Score=333.93 Aligned_cols=256 Identities=20% Similarity=0.284 Sum_probs=198.2
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCceeeeeeeeec--CceEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEE--EHQRILVY 680 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~--~~~~~LV~ 680 (927)
..|++.+.||+|+||.||+|+.. +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 45777899999999999999875 6899999998743 3467889999999997 9999999999987 66789999
Q ss_pred EecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC-cEEEeeccccccccc
Q 002410 681 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEE 759 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~-~~kL~DFGla~~~~~ 759 (927)
||+++++|.+++. .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+||+|||+++....
T Consensus 113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999885 37889999999999999999998 9999999999999999776 899999999987544
Q ss_pred cccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH--------HhhhcC
Q 002410 760 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKG 830 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~--------~~~~~~ 830 (927)
... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+..... ..+...
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHh
Confidence 322 233458999999999877 67899999999999999999999999532221 111111110 000000
Q ss_pred C--------------eeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 831 D--------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 831 ~--------------~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
. ....................+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 00000000111111123457889999999999999999999986
No 193
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=344.73 Aligned_cols=255 Identities=22% Similarity=0.299 Sum_probs=193.2
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCc------eE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 676 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~------~~ 676 (927)
.|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 4667889999999999999985 69999999986532 334567899999999999999999999987653 46
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 9999999 8899999873 468999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCC----
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---- 831 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~---- 831 (927)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+... .+........
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~---~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK---EIMKVTGTPPAEFV 250 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHHCCCCHHHH
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcCCCCHHHH
Confidence 5432 223458999999999876 689999999999999999999999998544322111 1111000000
Q ss_pred --------------eeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 832 --------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 832 --------------~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
........+ ..........+.+|+.+||+.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000 00111223468899999999999999999999873
No 194
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-36 Score=346.32 Aligned_cols=267 Identities=22% Similarity=0.273 Sum_probs=205.0
Q ss_pred hhhHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC--------CCceeeeeee
Q 002410 599 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--------HRNLVPLIGY 669 (927)
Q Consensus 599 ~~el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~--------HpnIv~l~~~ 669 (927)
..++....|++.++||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||++++++
T Consensus 31 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 31 IGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp TTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred hhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 34444567888999999999999999876 5889999999754 344577889999999995 7889999999
Q ss_pred ee----cCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcccccCCC
Q 002410 670 CE----EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINM 744 (927)
Q Consensus 670 ~~----~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~-~ivH~DLkp~NILld~~~ 744 (927)
+. .....++||||+ +++|.+.+... ....+++..++.++.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 110 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 110 FKISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCH
T ss_pred eeecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccc
Confidence 87 566899999999 56666666543 23569999999999999999999998 7 999999999999998775
Q ss_pred -------------------------------------------------cEEEeeccccccccccccccccccccCCCcc
Q 002410 745 -------------------------------------------------RAKVSDFGLSRQAEEDLTHISSVARGTVGYL 775 (927)
Q Consensus 745 -------------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~ 775 (927)
.+||+|||+++...... ....||+.|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y~ 260 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYR 260 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGGC
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCccc
Confidence 79999999998765432 2345899999
Q ss_pred CCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccch---hhHHHHHHHhhhc--------CC-----------ee
Q 002410 776 DPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---LNIVHWARSMIKK--------GD-----------VI 833 (927)
Q Consensus 776 APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~---~~l~~~~~~~~~~--------~~-----------~~ 833 (927)
|||++.+..++.++|||||||++|||++|+.||........ ......+...... +. ..
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 340 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK 340 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence 99999998999999999999999999999999975443221 1111111111110 00 00
Q ss_pred eeccccc---------cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 834 SIVDPVL---------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 834 ~~~d~~l---------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.+.+... ...........+.+|+.+||+.||++|||++|+++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 341 HITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0000000 01234556678999999999999999999999985
No 195
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.7e-36 Score=347.10 Aligned_cols=197 Identities=25% Similarity=0.350 Sum_probs=166.1
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecC-----ceEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRI 677 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~-----~~~~ 677 (927)
.|.+.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+++|++++||||+++++++... +..+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 5677899999999999999986 5889999999753 234457899999999999999999999998765 5789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+||||++ |+|.+++. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 107 lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFK---TPIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEECCS-EEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCC-cCHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 9999986 69999997 35679999999999999999999999 89999999999999999999999999999876
Q ss_pred cccccc---------------------cccccccCCCccCCCcc-CCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 002410 758 EEDLTH---------------------ISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELISGKKPVS 809 (927)
Q Consensus 758 ~~~~~~---------------------~~~~~~gt~~Y~APE~l-~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 809 (927)
...... ......||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 443211 12345689999999986 56679999999999999999998655554
No 196
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.8e-36 Score=356.78 Aligned_cols=252 Identities=27% Similarity=0.406 Sum_probs=199.6
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
....|++.+.||+|+||+||+|+.+ +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567888999999999999999987 68899999987543 23357789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC---CCcEEEeecccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 756 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFGla~~ 756 (927)
|||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++. ++.+||+|||+++.
T Consensus 115 ~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999998873 4568999999999999999999998 99999999999999976 45599999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
...... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .+.. .+..+.... .
T Consensus 189 ~~~~~~--~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i~~~~~~~-~ 257 (494)
T 3lij_A 189 FENQKK--MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---EILR----KVEKGKYTF-D 257 (494)
T ss_dssp CBTTBC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHTCCCC-C
T ss_pred CCCCcc--ccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHhCCCCC-C
Confidence 654322 233468999999999874 6899999999999999999999999744322 1111 111111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.+ .... ....+.+++.+||+.||++|||++|+++.
T Consensus 258 ~~-~~~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SP-EWKN----VSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SG-GGTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ch-hccc----CCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11 1111 12367899999999999999999999864
No 197
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.6e-36 Score=356.41 Aligned_cols=252 Identities=27% Similarity=0.369 Sum_probs=202.8
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEE
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 679 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV 679 (927)
....|++.++||+|+||+||+|..+ +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3467888999999999999999987 68999999986432 23457789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc---CCCcEEEeecccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQ 756 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld---~~~~~kL~DFGla~~ 756 (927)
|||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||+++.
T Consensus 100 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 999999999998874 4568999999999999999999998 9999999999999995 456799999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
...... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .+... +..+......
T Consensus 174 ~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~----i~~~~~~~~~ 243 (486)
T 3mwu_A 174 FQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKR----VETGKYAFDL 243 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHTCCCSCS
T ss_pred CCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHH----HHhCCCCCCC
Confidence 644322 233468999999999876 5899999999999999999999999744321 11111 1112111100
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+. . ......+.+++.+||+.||++|||+.|+++.
T Consensus 244 -~~-~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 -PQ-W----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -GG-G----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -cc-c----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0 1123467899999999999999999999874
No 198
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.3e-36 Score=331.05 Aligned_cols=261 Identities=21% Similarity=0.302 Sum_probs=198.4
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEec
Q 002410 607 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 683 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~~ 683 (927)
|++.+.||+|+||.||+|+.+ +|+.||||+++.... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence 556789999999999999987 689999999875432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccc
Q 002410 684 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 763 (927)
Q Consensus 684 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~ 763 (927)
+ ++|.+++... ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 85 ~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 85 H-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp S-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred c-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 7 6999998754 23568899999999999999999998 89999999999999999999999999999775433221
Q ss_pred cccccccCCCccCCCccCCCC-CCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCC--e---ee--e
Q 002410 764 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD--V---IS--I 835 (927)
Q Consensus 764 ~~~~~~gt~~Y~APE~l~~~~-~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~--~---~~--~ 835 (927)
.....+++.|+|||.+.+.. ++.++|||||||++|||++|+.||......+ .+....+....... . .. .
T Consensus 160 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 160 -YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp -TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHHHHhCCCchhhhhHhhcCcc
Confidence 22345799999999997765 7999999999999999999999997443221 11111111100000 0 00 0
Q ss_pred ccccccC----C---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 836 VDPVLIG----N---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 836 ~d~~l~~----~---~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..+.... . ........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 0 00112346889999999999999999999986
No 199
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.7e-37 Score=332.33 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=186.2
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-h-hHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-H-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-~-~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~ 680 (927)
...|++.+.||+|+||.||+|+.. +|+.||||+++.... . ..+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 345677899999999999999985 689999999976432 2 2334455555688889999999999999999999999
Q ss_pred EecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 681 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||++ |+|.+++.... ....+++..++.++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 58877775321 35679999999999999999999998 7 99999999999999999999999999998765
Q ss_pred ccccccccccccCCCccCCCcc----CCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 759 EDLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l----~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
.... .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||...... ...+. ........ .
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~----~~~~~~~~-~ 233 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQLK----QVVEEPSP-Q 233 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHHHH----HHHHSCCC-C
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-HHHHH----HHhccCCC-C
Confidence 4322 2233589999999996 5667899999999999999999999999732221 11111 11221111 1
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.. .......+.+++.+||+.||++|||++|+++
T Consensus 234 ~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 LP--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CC--------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cc--------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 10 0112346889999999999999999999987
No 200
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.3e-36 Score=335.32 Aligned_cols=254 Identities=25% Similarity=0.348 Sum_probs=198.7
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--------hhHHHHHHHHHHHHhcCCCceeeeeeeee
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 671 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~L~~l~HpnIv~l~~~~~ 671 (927)
......|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 445677889999999999999999986 588999999865321 12345889999999999999999999987
Q ss_pred cCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc---EEE
Q 002410 672 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKV 748 (927)
Q Consensus 672 ~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL 748 (927)
.++ .++||||+++++|.+++. ....+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred CCc-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 665 899999999999999987 35678999999999999999999998 99999999999999987664 999
Q ss_pred eeccccccccccccccccccccCCCccCCCcc---CCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHH
Q 002410 749 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 825 (927)
Q Consensus 749 ~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l---~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~ 825 (927)
+|||+++...... ......||+.|+|||++ ....++.++|||||||++|||++|+.||....... .+...+
T Consensus 159 ~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~-- 232 (322)
T 2ycf_A 159 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI-- 232 (322)
T ss_dssp CCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHH--
T ss_pred ccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHH--
Confidence 9999998764322 12234589999999997 35678999999999999999999999997443321 111111
Q ss_pred hhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 826 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 826 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..+.... .+.... .....+.+++.+||+.||++||+++|+++
T Consensus 233 --~~~~~~~--~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 --TSGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --HHTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HhCcccc--Cchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111110 011111 12346889999999999999999999985
No 201
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-36 Score=357.77 Aligned_cols=253 Identities=27% Similarity=0.382 Sum_probs=206.0
Q ss_pred HHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
.....|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 44567888999999999999999987 68999999986532 334678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc---cCCCcEEEeecccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLS 754 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl---d~~~~~kL~DFGla 754 (927)
+||||+.+|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||++
T Consensus 103 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 99999999999999873 5679999999999999999999999 999999999999999 56789999999999
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
+....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .+... +..+....
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~----i~~~~~~~ 246 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DILKK----VEKGKYTF 246 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HHHCCCCC
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHHHH----HHcCCCCC
Confidence 87654322 223458999999999876 6899999999999999999999999744321 12211 12221111
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.. +. .......+.+++.+||+.||++|||++|+++.
T Consensus 247 ~~-~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 EL-PQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CS-GG-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CC-cc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00 00 01123468899999999999999999999864
No 202
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.4e-36 Score=355.44 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=202.6
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 607 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
|.+.+.||+|+||.||+|+.+ +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 187 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~ 266 (543)
T 3c4z_A 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI 266 (543)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEe
Confidence 445678999999999999986 599999999975322 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 683 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 683 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
++||+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 99999999987543 24579999999999999999999998 999999999999999999999999999998765433
Q ss_pred cccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-hhhHHHHHHHhhhcCCeeeeccccc
Q 002410 762 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA-ELNIVHWARSMIKKGDVISIVDPVL 840 (927)
Q Consensus 762 ~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~-~~~l~~~~~~~~~~~~~~~~~d~~l 840 (927)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+.+ .... ... .
T Consensus 344 ~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~---~i~~-~~~------~- 411 (543)
T 3c4z_A 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ---RVLE-QAV------T- 411 (543)
T ss_dssp CC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH---HHHH-CCC------C-
T ss_pred cc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH---HHhh-ccc------C-
Confidence 22 233469999999999999999999999999999999999999997543221 111211 1111 111 0
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 002410 841 IGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 875 (927)
Q Consensus 841 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~-----~eVl~ 875 (927)
++......+.+++.+||+.||++||++ +||++
T Consensus 412 ---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 ---YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ---CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ---CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 111223467899999999999999975 55553
No 203
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-36 Score=328.64 Aligned_cols=249 Identities=24% Similarity=0.349 Sum_probs=196.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc----chhHHHHHHHHHHHHhcCCCceeeeeeee--ecCceEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRIL 678 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~----~~~~~~~~~E~~~L~~l~HpnIv~l~~~~--~~~~~~~L 678 (927)
.|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++ .+.+..++
T Consensus 6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 4667899999999999999986 58899999987532 23457799999999999999999999998 45567899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||++++ |.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 99999876 77777644 35679999999999999999999998 999999999999999999999999999998754
Q ss_pred ccc-cccccccccCCCccCCCccCCCC--CCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 759 EDL-THISSVARGTVGYLDPEYYGNQQ--LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 759 ~~~-~~~~~~~~gt~~Y~APE~l~~~~--~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
... ........|++.|+|||++.+.. .+.++||||||+++|||++|+.||...... ...+ .+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~----~i~~~~~--- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---KLFE----NIGKGSY--- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHH----HHHHCCC---
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---HHHH----HHhcCCC---
Confidence 322 22223445899999999987643 478999999999999999999999743321 1111 1111211
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.+.. .....+.+++.+||+.||++||+++|+++.
T Consensus 231 ---~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 ---AIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---CCCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---CCCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111 123467899999999999999999999864
No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.2e-36 Score=338.31 Aligned_cols=250 Identities=26% Similarity=0.363 Sum_probs=200.7
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc--------hhHHHHHHHHHHHHhc-CCCceeeeeeeeecCc
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 674 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~--------~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~ 674 (927)
..|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++++ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 45666789999999999999986 699999999865321 1245688999999999 7999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccc
Q 002410 675 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 754 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla 754 (927)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 99999999999999999973 4578999999999999999999998 89999999999999999999999999999
Q ss_pred ccccccccccccccccCCCccCCCccC------CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhh
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 828 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 828 (927)
........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..... +.
T Consensus 248 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~----i~ 318 (365)
T 2y7j_A 248 CHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---LMLRM----IM 318 (365)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH----HH
T ss_pred cccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH---HHHHH----HH
Confidence 87654322 23356899999999885 336889999999999999999999999743221 11111 11
Q ss_pred cCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 829 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 829 ~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.+.... ..+. ... ....+.+++.+||+.||++||+++|+++
T Consensus 319 ~~~~~~-~~~~-~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQYQF-SSPE-WDD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCCCC-CHHH-HSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCCC-CCcc-ccc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111100 0000 011 1236889999999999999999999986
No 205
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.2e-37 Score=351.70 Aligned_cols=240 Identities=17% Similarity=0.158 Sum_probs=185.6
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc---cchhHHHHHHHHH---HHHhcCCCceeeee-------eeee
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVA---LLSRIHHRNLVPLI-------GYCE 671 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~---~L~~l~HpnIv~l~-------~~~~ 671 (927)
.|.+.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++ ++++++||||++++ +++.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 4556789999999999999974 6999999998742 3345678999994 55555899999998 5555
Q ss_pred cCc-----------------eEEEEEEecCCCCHHHHhccCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 002410 672 EEH-----------------QRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIH 730 (927)
Q Consensus 672 ~~~-----------------~~~LV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH 730 (927)
+.+ ..++||||+ +|+|.+++.... ....+++..++.|+.||+.||+|||+ ++|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH 229 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVH 229 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEEC
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 443 278999999 689999997431 11234468888999999999999999 89999
Q ss_pred cCCCCCcccccCCCcEEEeeccccccccccccccccccccCCCccCCCccCCC-----------CCCcchhHHHHHHHHH
Q 002410 731 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-----------QLTEKSDVYSFGVVLL 799 (927)
Q Consensus 731 ~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-----------~~s~ksDVwSlGvlL~ 799 (927)
|||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 99999999999999999999999986433 2233457 999999999877 8999999999999999
Q ss_pred HHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 800 ELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 800 eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
||++|+.||.......... .+.. . ... ....+.+++.+||+.||++||++.|+++
T Consensus 305 elltg~~Pf~~~~~~~~~~---------------~~~~-~-~~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 305 WIWCADLPITKDAALGGSE---------------WIFR-S-CKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHSSCCC------CCSG---------------GGGS-S-CCC----CCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHCCCCCcccccccchh---------------hhhh-h-ccC----CCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999997433211100 0000 0 011 1246889999999999999999999986
No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.5e-37 Score=336.24 Aligned_cols=261 Identities=23% Similarity=0.309 Sum_probs=184.3
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
..|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 44667899999999999999865 68999999986543 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhccC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 683 MHNGTLRDRLHGS-----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 683 ~~~gsL~~~L~~~-----~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+++++|.+++... .....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 9999999998631 124568999999999999999999998 89999999999999999999999999998765
Q ss_pred ccccc----ccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 758 EEDLT----HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 758 ~~~~~----~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
..... .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ... ..........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~-~~~~~~~~~~ 248 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LML-TLQNDPPSLE 248 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHH-HHTSSCCCTT
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HHH-HhccCCCccc
Confidence 43211 11223458999999999865 5689999999999999999999999974433221 111 1000000000
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
....++..... ....+.+++.+||+.||++||++.|+++
T Consensus 249 ~~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKEMLKK----YGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----CCCCC----CCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccchhhhh----hhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00111111112 2346889999999999999999999986
No 207
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.5e-36 Score=342.36 Aligned_cols=261 Identities=23% Similarity=0.270 Sum_probs=192.3
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccc-----------hhHHHHHHHHHHHHhcCCCceeeeeeeee--
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS-----------HRTQQFVTEVALLSRIHHRNLVPLIGYCE-- 671 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~-----------~~~~~~~~E~~~L~~l~HpnIv~l~~~~~-- 671 (927)
..|.+.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++.
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 45566899999999999999998899999999864322 12377999999999999999999999984
Q ss_pred ---cCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEE
Q 002410 672 ---EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 748 (927)
Q Consensus 672 ---~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL 748 (927)
.....++||||++ |+|.+.+.. ....+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl 175 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITI 175 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEE
Confidence 3446899999997 688888874 34579999999999999999999999 89999999999999999999999
Q ss_pred eeccccccccccccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhh
Q 002410 749 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 827 (927)
Q Consensus 749 ~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~ 827 (927)
+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+....
T Consensus 176 ~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~ 250 (362)
T 3pg1_A 176 CDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ---LNKIVEVV 250 (362)
T ss_dssp CCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHH
T ss_pred EecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHc
Confidence 99999976443322 233458899999999876 6789999999999999999999999985443211 11111111
Q ss_pred hcCCee------------------eeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 828 KKGDVI------------------SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 828 ~~~~~~------------------~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
...... ..................+.+++.+||+.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 100000 0000000000011123468899999999999999999999864
No 208
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.3e-37 Score=345.73 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=179.3
Q ss_pred HhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhc--CCCceeeee-------eeeecC
Q 002410 607 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRI--HHRNLVPLI-------GYCEEE 673 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l--~HpnIv~l~-------~~~~~~ 673 (927)
|.+.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++.+ +||||++++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 556789999999999999976 689999999987432 3456678886555555 699988755 333322
Q ss_pred -----------------ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeEe
Q 002410 674 -----------------HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTR------LQIAHDAAKGLEYLHTGCNPGIIH 730 (927)
Q Consensus 674 -----------------~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~------~~i~~qia~gL~~LH~~~~~~ivH 730 (927)
...++||||++ |+|.+++... +..+.+..+ ..++.||+.||+|||+ ++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 34799999998 8999999853 223455555 6788999999999998 99999
Q ss_pred cCCCCCcccccCCCcEEEeeccccccccccccccccccccCCCccCCCccCC--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 002410 731 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPV 808 (927)
Q Consensus 731 ~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf 808 (927)
|||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999998764322 13346799999999987 68999999999999999999999999
Q ss_pred CcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 809 SVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 809 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.......... .........................+.+++.+||+.||++|||++|+++
T Consensus 294 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccc--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 8543221100 0000000000000100001122457889999999999999999999975
No 209
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.8e-36 Score=338.93 Aligned_cols=260 Identities=21% Similarity=0.288 Sum_probs=199.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecC-----ceEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 678 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~-----~~~~L 678 (927)
.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 4667899999999999999876 68899999997543 33447789999999999999999999998654 46899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||++ |+|.+++.. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 108 v~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999997 599999873 458999999999999999999998 999999999999999999999999999998765
Q ss_pred cccccc--ccccccCCCccCCCccC-CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCee--
Q 002410 759 EDLTHI--SSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI-- 833 (927)
Q Consensus 759 ~~~~~~--~~~~~gt~~Y~APE~l~-~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~-- 833 (927)
...... .....||+.|+|||++. +..++.++|||||||++|||++|+.||......+..... ..........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i---~~~~~~~~~~~~ 256 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI---LGILGSPSQEDL 256 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH---HHHHCSCCHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH---HHHhCCCCHHHH
Confidence 432221 23446899999999865 455899999999999999999999999755433222111 1111000000
Q ss_pred -e------------eccccc--cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 834 -S------------IVDPVL--IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 834 -~------------~~d~~l--~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
. ...+.. ...........+.+|+.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000000 000001123468899999999999999999999863
No 210
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.6e-36 Score=333.18 Aligned_cols=263 Identities=22% Similarity=0.296 Sum_probs=203.5
Q ss_pred HHHHhhcccccccccEEEEEEEE-C-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCc------eeeeeeeeecCce
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKM-K-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEEEHQ 675 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~-~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hpn------Iv~l~~~~~~~~~ 675 (927)
...|++.+.||+|+||.||+|.. + +++.||||+++.. ....+.+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 44677889999999999999987 3 6889999999754 344577889999999997654 9999999999999
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC-------------
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI------------- 742 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~------------- 742 (927)
.++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 99999999 89999999754 23468999999999999999999998 99999999999999987
Q ss_pred ------CCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccch
Q 002410 743 ------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 816 (927)
Q Consensus 743 ------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~ 816 (927)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred ccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 668999999999865432 2234589999999999999999999999999999999999999975443222
Q ss_pred hhHHHHHHHhh-----hcCCeeeec---------------------ccc-ccCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 002410 817 LNIVHWARSMI-----KKGDVISIV---------------------DPV-LIGNVKIESIWRIAEVAIQCVEQRGFSRPK 869 (927)
Q Consensus 817 ~~l~~~~~~~~-----~~~~~~~~~---------------------d~~-l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 869 (927)
........... ......... .+. -...........+.+++.+||+.||++|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 21111110000 000000000 000 000112345668999999999999999999
Q ss_pred HHHHHHH
Q 002410 870 MQEIVLA 876 (927)
Q Consensus 870 ~~eVl~~ 876 (927)
++|+++.
T Consensus 323 ~~ell~h 329 (339)
T 1z57_A 323 LREALKH 329 (339)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999853
No 211
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.5e-36 Score=366.36 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=207.7
Q ss_pred HHHHHHhhcccccccccEEEEEEEECC----CcEEEEEEccCccc-hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 676 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~----g~~vAvK~l~~~~~-~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~ 676 (927)
+....+++.+.||+|+||.||+|.+.. +..||||+++.... ...+.+.+|+.++++++||||+++++++.+ +..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence 344567788999999999999998753 46799999876433 345789999999999999999999999854 568
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999999753 4568999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
.............+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .....+ ..+....
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~~~i----~~~~~~~- 612 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRI----ENGERLP- 612 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHH----HHTCCCC-
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH----HcCCCCC-
Confidence 65543333334457789999999988899999999999999999997 99999743321 122211 1111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.+...+..+.+++.+||+.||++||++.||++.|++++..+
T Consensus 613 --------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 --------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11122347889999999999999999999999999988654
No 212
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.2e-36 Score=328.87 Aligned_cols=249 Identities=26% Similarity=0.316 Sum_probs=200.7
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---------chhHHHHHHHHHHHHhcC-CCceeeeeeeeecCc
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---------SHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH 674 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---------~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~~~ 674 (927)
.|++.+.||+|+||.||+|..+ +|+.||||++.... ....+.+.+|++++++++ ||||+++++++..++
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 4567889999999999999986 58999999986532 123456889999999995 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccc
Q 002410 675 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 754 (927)
Q Consensus 675 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla 754 (927)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999974 4578999999999999999999998 99999999999999999999999999999
Q ss_pred ccccccccccccccccCCCccCCCccC------CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhh
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 828 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~------~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 828 (927)
........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||...... .... .+.
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~ 242 (298)
T 1phk_A 172 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LMLR----MIM 242 (298)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHH
T ss_pred hhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---HHHH----HHh
Confidence 87654322 22345899999999884 456889999999999999999999999743221 1111 111
Q ss_pred cCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 829 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 829 ~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.+.... ..+ ........+.+++.+||+.||++||+++|+++
T Consensus 243 ~~~~~~-~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 243 SGNYQF-GSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HTCCCC-CTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCccc-Ccc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111110 000 01122347889999999999999999999985
No 213
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2e-36 Score=345.98 Aligned_cols=260 Identities=23% Similarity=0.271 Sum_probs=193.2
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCc------eEEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QRILV 679 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~------~~~LV 679 (927)
.|.+.+.||+|+||.||+|++..+..||+|++..... ...+|+++++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 4677899999999999999998777899998865322 1236999999999999999999985433 37899
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc-CCCcEEEeecccccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAE 758 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld-~~~~~kL~DFGla~~~~ 758 (927)
|||++++.+............+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9999875444333222235679999999999999999999998 9999999999999999 79999999999998764
Q ss_pred ccccccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh----------h
Q 002410 759 EDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM----------I 827 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~----------~ 827 (927)
.... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||...+..+ .+....+.. .
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHHH
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHhh
Confidence 4322 2234589999999998664 58999999999999999999999998544322 111111110 0
Q ss_pred ----hcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 828 ----KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 828 ----~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
............+...........+.+|+.+||+.||++|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000000000000000111233478899999999999999999999874
No 214
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.1e-36 Score=355.58 Aligned_cols=250 Identities=27% Similarity=0.381 Sum_probs=199.4
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-------------hhHHHHHHHHHHHHhcCCCceeeeeeee
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 670 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-------------~~~~~~~~E~~~L~~l~HpnIv~l~~~~ 670 (927)
..|.+.++||+|+||+||+|+.+ +++.||||++..... ...+.+.+|++++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 45777899999999999999987 578999999875321 2346789999999999999999999999
Q ss_pred ecCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC---cEE
Q 002410 671 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAK 747 (927)
Q Consensus 671 ~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~---~~k 747 (927)
.+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ .+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999874 4569999999999999999999998 9999999999999998776 699
Q ss_pred EeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhh
Q 002410 748 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 827 (927)
Q Consensus 748 L~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~ 827 (927)
|+|||+++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .+.. .+
T Consensus 190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~----~i 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ---DIIK----KV 259 (504)
T ss_dssp ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HH
T ss_pred EEECCCCEEcCCCCc--cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----HH
Confidence 999999987654322 233458999999999874 6899999999999999999999999744322 1111 11
Q ss_pred hcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 828 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 828 ~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
..+.... +...... ....+.+++.+||+.||.+|||++|+++.
T Consensus 260 ~~~~~~~--~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYF--DFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCC--CccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 2221110 0000011 12368899999999999999999999864
No 215
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-36 Score=345.45 Aligned_cols=259 Identities=21% Similarity=0.226 Sum_probs=193.8
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeec-----------
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 672 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~----------- 672 (927)
..|.+.+.||+|+||.||+|+.. +|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 35677899999999999999875 689999999865422 23479999999999999999999843
Q ss_pred ---------------------------CceEEEEEEecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 002410 673 ---------------------------EHQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGC 724 (927)
Q Consensus 673 ---------------------------~~~~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~ 724 (927)
....++||||++ |+|.+.+.... ....+++..+..++.||+.||+|||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-- 159 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-- 159 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT--
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 334789999998 58777765321 45679999999999999999999998
Q ss_pred CCCeEecCCCCCccccc-CCCcEEEeeccccccccccccccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHH
Q 002410 725 NPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELI 802 (927)
Q Consensus 725 ~~~ivH~DLkp~NILld-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLl 802 (927)
++|+||||||+|||++ .++.+||+|||+++....... .....+|+.|+|||++.+. .++.++||||+||++|||+
T Consensus 160 -~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 160 -LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp -TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred -CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 9999999999999998 689999999999987644322 2234579999999998764 5899999999999999999
Q ss_pred hCCCCCCcccccchhhHHHHHHHhhhc----------CCeee-----eccccccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 002410 803 SGKKPVSVEDFGAELNIVHWARSMIKK----------GDVIS-----IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR 867 (927)
Q Consensus 803 tG~~Pf~~~~~~~~~~l~~~~~~~~~~----------~~~~~-----~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~R 867 (927)
+|+.||......+ .+...+. .... ..... ..........+......+.+|+.+||+.||++|
T Consensus 237 ~g~~pf~~~~~~~--~~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 237 LGKPLFSGETSID--QLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HSSCSSCCSSHHH--HHHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred hCCCCCCCCChHH--HHHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999998543322 1111111 0000 00000 000000000112233468899999999999999
Q ss_pred CCHHHHHHH
Q 002410 868 PKMQEIVLA 876 (927)
Q Consensus 868 Ps~~eVl~~ 876 (927)
||+.|+++.
T Consensus 314 ~t~~e~l~h 322 (383)
T 3eb0_A 314 INPYEAMAH 322 (383)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHhcC
Confidence 999999853
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.8e-36 Score=337.40 Aligned_cols=258 Identities=22% Similarity=0.275 Sum_probs=190.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecCc------eE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 676 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~------~~ 676 (927)
.|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 4667899999999999999876 5889999998753 2344567889999999999999999999987654 78
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||++ |+|.+.+. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 106 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 106 YIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999997 57888876 248899999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHH------------
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR------------ 824 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~------------ 824 (927)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+. +.....
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHC-CCCCCHHHHTT
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCCHHHHHH
Confidence 54322 12334689999999999999999999999999999999999999975432211 111000
Q ss_pred ------HhhhcCC------eeeeccccccCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 825 ------SMIKKGD------VISIVDPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 825 ------~~~~~~~------~~~~~d~~l~~~---~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
....... ............ ........+.+|+.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000 000000000000 011235578999999999999999999999874
No 217
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.2e-35 Score=324.99 Aligned_cols=250 Identities=24% Similarity=0.403 Sum_probs=192.8
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeec-----------
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 672 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~----------- 672 (927)
..|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45777899999999999999976 6899999999643 3455788999999999999999999998754
Q ss_pred --CceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEee
Q 002410 673 --EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 750 (927)
Q Consensus 673 --~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~D 750 (927)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence 45789999999999999999753 4567889999999999999999998 8999999999999999999999999
Q ss_pred ccccccccccc-------------cccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccch
Q 002410 751 FGLSRQAEEDL-------------THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 816 (927)
Q Consensus 751 FGla~~~~~~~-------------~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~ 816 (927)
||++....... ........|++.|+|||.+.+. .++.++|||||||++|||++ ||.... ..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~~ 234 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--ER 234 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--HH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--hH
Confidence 99998754321 1112234589999999999764 78999999999999999998 554111 11
Q ss_pred hhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 817 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 817 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..... . +.... ..+...........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~---~-~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 VNILK---K-LRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHH---H-HHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHH---h-ccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11111 1 11111 11112223333456889999999999999999999986
No 218
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.5e-36 Score=366.18 Aligned_cols=248 Identities=25% Similarity=0.342 Sum_probs=202.7
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc---chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~L 678 (927)
...|++.+.||+|+||.||+|+.+ +++.||||++++.. ....+.+..|..++..+ +||+|+++++++.+.+..++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 345677899999999999999987 58899999997532 23456788899999988 79999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+||||+.++.+||+|||+++...
T Consensus 420 V~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999984 3569999999999999999999998 999999999999999999999999999998643
Q ss_pred ccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccc
Q 002410 759 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 838 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 838 (927)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. .+. .... ....
T Consensus 494 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~---~~~---~~i~-~~~~------ 559 (674)
T 3pfq_A 494 WDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELF---QSIM-EHNV------ 559 (674)
T ss_dssp CTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHH---HHHH-SSCC------
T ss_pred cCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH---HHH---HHHH-hCCC------
Confidence 3222 233456999999999999999999999999999999999999999744321 111 1111 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 002410 839 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 875 (927)
Q Consensus 839 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~-----~eVl~ 875 (927)
. ++......+.+|+.+||+.||++||++ +||++
T Consensus 560 ~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp C----CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred C----CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 0 111223468899999999999999997 66654
No 219
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.6e-36 Score=332.90 Aligned_cols=260 Identities=22% Similarity=0.277 Sum_probs=198.1
Q ss_pred HHhhcccccccccEEEEEEEEC--CCcEEEEEEccCccch--hHHHHHHHHHHHHhc---CCCceeeeeeeee-----cC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSCSH--RTQQFVTEVALLSRI---HHRNLVPLIGYCE-----EE 673 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~--~g~~vAvK~l~~~~~~--~~~~~~~E~~~L~~l---~HpnIv~l~~~~~-----~~ 673 (927)
.|++.+.||+|+||.||+|+.. +|+.||+|+++..... ....+.+|+.+++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 4667899999999999999983 6889999998643221 223566787777766 8999999999987 56
Q ss_pred ceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccc
Q 002410 674 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 753 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGl 753 (927)
...++||||++ |+|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 77899999997 6999999754 24458999999999999999999998 9999999999999999999999999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcC---
Q 002410 754 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG--- 830 (927)
Q Consensus 754 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~--- 830 (927)
++...... ......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......
T Consensus 167 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 167 ARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEE 241 (326)
T ss_dssp CCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGG
T ss_pred cccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCcc
Confidence 98764332 2233458999999999999999999999999999999999999997443221 111111111100
Q ss_pred Ceeee-------c---cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 831 DVISI-------V---DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 831 ~~~~~-------~---d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..... . ...............+.+++.+||+.||++||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 0 000000111223346789999999999999999999985
No 220
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=332.92 Aligned_cols=259 Identities=21% Similarity=0.292 Sum_probs=191.7
Q ss_pred HHhhcccccccccEEEEEEEECC-CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeee-------------
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE------------- 671 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~------------- 671 (927)
.|++.+.||+|+||.||+|.... ++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 45678899999999999999874 8999999998766666788999999999999999999999873
Q ss_pred -cCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc-CCCcEEEe
Q 002410 672 -EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVS 749 (927)
Q Consensus 672 -~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld-~~~~~kL~ 749 (927)
+....++||||++ |+|.+++. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++ +++.+||+
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 69999986 3568999999999999999999998 9999999999999997 56799999
Q ss_pred eccccccccccccc--cccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 002410 750 DFGLSRQAEEDLTH--ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 826 (927)
Q Consensus 750 DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 826 (927)
|||+++........ ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+.. ..+...
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~ 240 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM---QLILES 240 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHh
Confidence 99999876432211 1223457899999998755 67899999999999999999999999754322111 111100
Q ss_pred hhc----------CCeeeecccccc-C-----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 827 IKK----------GDVISIVDPVLI-G-----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 827 ~~~----------~~~~~~~d~~l~-~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
... ......+..... . .........+.+++.+||+.||++||+++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000 000000000000 0 000112347889999999999999999999986
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=334.37 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=198.2
Q ss_pred HHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
...|++.+.||+|+||.||+|.+++ .+|+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 3446678999999999999999864 49999987532 2234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+||+++ ++.+||+|||+++......
T Consensus 110 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 110 LCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred cccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 99999999999752 4568999999999999999999998 9999999999999998 6899999999987643211
Q ss_pred ----cccccccccCCCccCCCccCC---------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhh
Q 002410 762 ----THISSVARGTVGYLDPEYYGN---------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 828 (927)
Q Consensus 762 ----~~~~~~~~gt~~Y~APE~l~~---------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 828 (927)
........|++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... .... .+.
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~----~~~ 256 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---AIIW----QMG 256 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH---HHHH----HHH
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH----Hhc
Confidence 112223458899999999864 45788999999999999999999999743321 1111 111
Q ss_pred cCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhc
Q 002410 829 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 884 (927)
Q Consensus 829 ~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e 884 (927)
.+......... ....+.+++.+||+.||++||+++|++++|+++....
T Consensus 257 ~~~~~~~~~~~--------~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 257 TGMKPNLSQIG--------MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TTCCCCCCCSS--------CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred cCCCCCCCcCC--------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 22111111111 1225789999999999999999999999999987654
No 222
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-36 Score=330.74 Aligned_cols=249 Identities=24% Similarity=0.399 Sum_probs=193.3
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeec------CceEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE------EHQRI 677 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~------~~~~~ 677 (927)
.|++.+.||+|+||.||+|++. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+..+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 4567899999999999999985 68999999987542 3456788999999999 79999999999876 56789
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+||||+++|+|.+++... ....+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++...
T Consensus 104 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 999999999999999854 24568999999999999999999998 89999999999999999999999999999876
Q ss_pred cccccccccccccCCCccCCCccC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCe
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 832 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~-----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~ 832 (927)
..... ......|++.|+|||++. +..++.++|||||||++|||++|+.||....... ... ... ....
T Consensus 180 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~---~~~-~~~~ 251 (326)
T 2x7f_A 180 DRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR---ALF---LIP-RNPA 251 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH---HHH---HHH-HSCC
T ss_pred CcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---HHH---Hhh-cCcc
Confidence 43322 122345899999999986 5678999999999999999999999997333211 111 111 1111
Q ss_pred eeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 833 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 833 ~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
..... ......+.+++.+||+.||++||+++|+++
T Consensus 252 ~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 PRLKS--------KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCSC--------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCc--------cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11111 112246889999999999999999999987
No 223
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.5e-36 Score=335.02 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=202.9
Q ss_pred HHHhhcccccccccEEEEEEEECCCcEEEEEEccCccchh-----------------HHHHHHHHHHHHhcCCCceeeee
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHR-----------------TQQFVTEVALLSRIHHRNLVPLI 667 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~-----------------~~~~~~E~~~L~~l~HpnIv~l~ 667 (927)
..|.+.+.||+|+||.||+|.. +|+.||||++....... .+.+.+|++++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3567789999999999999999 89999999986432111 17899999999999999999999
Q ss_pred eeeecCceEEEEEEecCCCCHHHH------hccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc
Q 002410 668 GYCEEEHQRILVYEYMHNGTLRDR------LHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 741 (927)
Q Consensus 668 ~~~~~~~~~~LV~E~~~~gsL~~~------L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld 741 (927)
+++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ .++|+||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 999999999999999999999998 5432 25679999999999999999999996 37999999999999999
Q ss_pred CCCcEEEeeccccccccccccccccccccCCCccCCCccCCC-CCCc-chhHHHHHHHHHHHHhCCCCCCcccccchhhH
Q 002410 742 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTE-KSDVYSFGVVLLELISGKKPVSVEDFGAELNI 819 (927)
Q Consensus 742 ~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~-ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l 819 (927)
.++.+||+|||++...... ......|+..|+|||.+.+. .++. ++|||||||++|||++|+.||...... ...
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~ 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--VEL 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--HHH
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHH
Confidence 9999999999999875443 22344689999999999877 6666 999999999999999999999744331 122
Q ss_pred HHHHHHhhhcCCeeeecc------cccc---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 820 VHWARSMIKKGDVISIVD------PVLI---GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 820 ~~~~~~~~~~~~~~~~~d------~~l~---~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.+. +..+......+ +... ..........+.+++.+||+.||++||+++|+++
T Consensus 262 ~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNN----IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHH----HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHH----HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 221 11121110000 0000 0000223347889999999999999999999986
No 224
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-35 Score=343.38 Aligned_cols=199 Identities=26% Similarity=0.320 Sum_probs=172.4
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhc------CCCceeeeeeeeecCceEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI------HHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l------~HpnIv~l~~~~~~~~~~~ 677 (927)
..|++.+.||+|+||.||+|... +++.||||+++.. ....+++.+|+++++.+ +|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 45778899999999999999876 5889999999754 33446778899988887 4679999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc--EEEeeccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSR 755 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~--~kL~DFGla~ 755 (927)
+||||+. ++|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||+++
T Consensus 176 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 9999996 6999998754 23458999999999999999999998 89999999999999999887 9999999997
Q ss_pred cccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 002410 756 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 813 (927)
Q Consensus 756 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~ 813 (927)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 65432 2234689999999999999999999999999999999999999975543
No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-36 Score=343.60 Aligned_cols=256 Identities=21% Similarity=0.309 Sum_probs=182.0
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc--cchhHHHHHHHHHHHHhcCCCceeeeeeeeecC------ce
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQ 675 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~------~~ 675 (927)
..|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 34667899999999999999875 6899999998753 233557788999999999999999999998653 56
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
.++|+|++ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 109 ~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred EEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 79999999 7899888863 569999999999999999999998 999999999999999999999999999998
Q ss_pred cccccccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 756 QAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 756 ~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.. ..+........ .+
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~p~-~~ 252 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---KLILRLVGTPG-AE 252 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCC-HH
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCC-HH
Confidence 75432 223468999999999876 68899999999999999999999999754432211 11111110000 00
Q ss_pred eccc-----------ccc--CCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 835 IVDP-----------VLI--GNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 835 ~~d~-----------~l~--~~~~-----~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.+.. .+. .... ......+.+|+.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 000 0000 0112467899999999999999999999874
No 226
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.8e-36 Score=335.29 Aligned_cols=251 Identities=21% Similarity=0.325 Sum_probs=196.7
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHH-HHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~-L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
..|++.+.||+|+||.||+|+.. +|+.||||+++... .....++..|..+ ++.++||||+++++++.+++..++|||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 34566789999999999999975 68999999997643 3344556666665 777899999999999999999999999
Q ss_pred ecCCCCHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 682 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
|+++ +|.+++.... ....+++..++.++.||+.||+|||+ + +|+||||||+|||++.++.+||+|||+++....
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 9975 9988876421 35679999999999999999999998 5 999999999999999999999999999987543
Q ss_pred cccccccccccCCCccCCCccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 760 DLTHISSVARGTVGYLDPEYYG----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l~----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ... .......... ..
T Consensus 207 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-~~~----~~~~~~~~~~-~~ 278 (340)
T 3an0_A 207 SV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQ----LKQVVEEPSP-QL 278 (340)
T ss_dssp HH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHH----HHHHHHSCCC-CC
T ss_pred cc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-HHH----HHHHhcCCCC-CC
Confidence 22 122345899999999964 347899999999999999999999999733221 111 1122221111 11
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
. .......+.+++.+||+.||++||+++|+++
T Consensus 279 ~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 279 P--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp C--------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C--------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 0112346889999999999999999999987
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.7e-36 Score=341.86 Aligned_cols=264 Identities=20% Similarity=0.280 Sum_probs=182.4
Q ss_pred Hhh-cccccccccEEEEEEEEC---CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeee--ecCceEEEEE
Q 002410 607 NNF-CKKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRILVY 680 (927)
Q Consensus 607 ~~~-~~~LG~G~~G~Vy~a~~~---~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~--~~~~~~~LV~ 680 (927)
|++ .++||+|+||.||+|+++ +++.||||++.... ....+.+|+++|++++||||+++++++ ......++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 444 568999999999999976 47899999997542 235688999999999999999999999 4477899999
Q ss_pred EecCCCCHHHHhccCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc----cCCCcEEEee
Q 002410 681 EYMHNGTLRDRLHGSV------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSD 750 (927)
Q Consensus 681 E~~~~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl----d~~~~~kL~D 750 (927)
||++ |+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 58887775321 22358999999999999999999998 999999999999999 6789999999
Q ss_pred cccccccccccc--ccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc------hhhHHH
Q 002410 751 FGLSRQAEEDLT--HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA------ELNIVH 821 (927)
Q Consensus 751 FGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~------~~~l~~ 821 (927)
||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ......
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999987654322 12234568999999999877 458999999999999999999999997443310 011111
Q ss_pred HHHHhhhcC---Ceeeec------------cccccCCCC---------HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 822 WARSMIKKG---DVISIV------------DPVLIGNVK---------IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 822 ~~~~~~~~~---~~~~~~------------d~~l~~~~~---------~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.+...+... ....+. ......... ......+.+|+.+||+.||++|||++|+++.
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111111100 000000 000000000 0012367899999999999999999999874
No 228
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-35 Score=333.84 Aligned_cols=271 Identities=20% Similarity=0.325 Sum_probs=203.7
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-----------CCceeeeeeeee
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----------HRNLVPLIGYCE 671 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-----------HpnIv~l~~~~~ 671 (927)
...|.+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 356778899999999999999975 6899999999753 334567889999999886 899999999987
Q ss_pred cCc----eEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCccccc-----
Q 002410 672 EEH----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLD----- 741 (927)
Q Consensus 672 ~~~----~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~-~ivH~DLkp~NILld----- 741 (927)
..+ ..++|||++ +++|.+++... ....+++..+..++.||+.||+|||+ + +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCC
Confidence 654 789999999 89999999754 24568999999999999999999998 7 999999999999994
Q ss_pred -CCCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc---hh
Q 002410 742 -INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA---EL 817 (927)
Q Consensus 742 -~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~---~~ 817 (927)
..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 34589999999998765432 23458999999999999899999999999999999999999998543221 11
Q ss_pred hHHHHHHHhhhc--------C----------Ceeeeccc-c---------ccCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 002410 818 NIVHWARSMIKK--------G----------DVISIVDP-V---------LIGNVKIESIWRIAEVAIQCVEQRGFSRPK 869 (927)
Q Consensus 818 ~l~~~~~~~~~~--------~----------~~~~~~d~-~---------l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 869 (927)
.....+...+.. + .....+.. . -....+......+.+|+.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 111111111100 0 00000000 0 001234566778999999999999999999
Q ss_pred HHHHHHH--HHhhhhhc
Q 002410 870 MQEIVLA--IQDSIKIE 884 (927)
Q Consensus 870 ~~eVl~~--L~~~~~~e 884 (927)
++|+++. +++....+
T Consensus 328 ~~ell~hp~f~~~~~~~ 344 (373)
T 1q8y_A 328 AGGLVNHPWLKDTLGME 344 (373)
T ss_dssp HHHHHTCGGGTTCTTCT
T ss_pred HHHHhhChhhhcccCcc
Confidence 9999873 55544433
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.7e-35 Score=326.94 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=195.4
Q ss_pred HHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCc--cchhHHHHHHHHHHHHhcC--CCceeeeeeeeecCceEEE
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~L~~l~--HpnIv~l~~~~~~~~~~~L 678 (927)
....|++.+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++ |+||+++++++.+++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 33456778999999999999999988999999998653 2345578999999999997 5999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||| +.+++|.+++.. ...+++..++.++.|+++||+|||+ ++|+||||||+||+++ ++.+||+|||+++...
T Consensus 106 v~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 106 VME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--
T ss_pred EEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEE-CCeEEEeecccccccc
Confidence 999 668899999984 4578999999999999999999998 8999999999999996 4899999999998765
Q ss_pred ccccc-cccccccCCCccCCCccCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 002410 759 EDLTH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 826 (927)
Q Consensus 759 ~~~~~-~~~~~~gt~~Y~APE~l~~-----------~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 826 (927)
..... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... .. ......
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~----~~~~~~ 252 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QI----SKLHAI 252 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-HH----HHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-HH----HHHHHH
Confidence 43221 1233458999999999865 4788899999999999999999999973221 11 111111
Q ss_pred hhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 827 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 827 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
....... ..+......+.+++.+||+.||++||+++|+++.
T Consensus 253 ~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 253 IDPNHEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HCTTSCC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hhccccc---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1111110 1111112468899999999999999999999864
No 230
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.8e-36 Score=346.52 Aligned_cols=259 Identities=24% Similarity=0.273 Sum_probs=192.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeec------CceEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQRIL 678 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~------~~~~~L 678 (927)
.|++.+.||+|+||.||+|++. +|+.||||++.... +...+|+++|++++||||+++++++.. ....++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4566789999999999999986 58999999986532 223479999999999999999998843 223679
Q ss_pred EEEecCCCCHHHHhccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC-CcEEEeecccccc
Q 002410 679 VYEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQ 756 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~-~~~kL~DFGla~~ 756 (927)
||||+++ +|.+.+... .....+++..+..++.||++||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999975 666655421 135679999999999999999999998 999999999999999955 6789999999987
Q ss_pred ccccccccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh-------hh
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM-------IK 828 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~-------~~ 828 (927)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+.+.++.. +.
T Consensus 207 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHH
T ss_pred cccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHH
Confidence 543322 2234689999999998764 78999999999999999999999997543221 222222110 00
Q ss_pred --cCCeeeeccccccC-----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 829 --KGDVISIVDPVLIG-----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 829 --~~~~~~~~d~~l~~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.....+..-+.+.. .+.......+.+|+.+||+.||++||++.|+++.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00111111111100 0111223578899999999999999999999863
No 231
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.9e-36 Score=338.43 Aligned_cols=265 Identities=19% Similarity=0.254 Sum_probs=186.6
Q ss_pred HHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeecCce------
Q 002410 603 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------ 675 (927)
Q Consensus 603 ~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~------ 675 (927)
....|++.+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 99 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccce
Confidence 3455677899999999999999986 68999999986542 223456778888999999999999999865333
Q ss_pred -EEEEEEecCCCCHHHHhcc-CCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCcccccC-CCcEEEee
Q 002410 676 -RILVYEYMHNGTLRDRLHG-SVNQKPLDWLTRLQIAHDAAKGLEYLH--TGCNPGIIHRDVKSSNILLDI-NMRAKVSD 750 (927)
Q Consensus 676 -~~LV~E~~~~gsL~~~L~~-~~~~~~l~~~~~~~i~~qia~gL~~LH--~~~~~~ivH~DLkp~NILld~-~~~~kL~D 750 (927)
.++||||+++ +|.+.+.. ......+++..+..++.|++.||+||| + ++|+||||||+|||++. ++.+||+|
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEee
Confidence 7899999986 44443332 224567899999999999999999999 7 99999999999999996 89999999
Q ss_pred ccccccccccccccccccccCCCccCCCccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh---
Q 002410 751 FGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM--- 826 (927)
Q Consensus 751 FGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~--- 826 (927)
||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||........ +....+..
T Consensus 176 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~ 251 (360)
T 3e3p_A 176 FGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHEIVRVLGCP 251 (360)
T ss_dssp CTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCC
T ss_pred CCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHHHHHHcCCC
Confidence 999987654332 2234589999999998654 489999999999999999999999975433221 11111110
Q ss_pred -------hhc-CCeeeecc------ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 827 -------IKK-GDVISIVD------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 827 -------~~~-~~~~~~~d------~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+.. .......+ ..............+.+|+.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000 00000000 000011122245678999999999999999999999864
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-35 Score=323.53 Aligned_cols=253 Identities=27% Similarity=0.366 Sum_probs=203.2
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
......|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 445678888999999999999999987 68999999986532 234578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC---CcEEEeecccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLS 754 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~---~~~kL~DFGla 754 (927)
+|+||+++++|.+.+.. ...+++..++.++.||+.||+|||+ ++|+||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 99999999999998874 3568999999999999999999998 899999999999999754 46999999999
Q ss_pred ccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeee
Q 002410 755 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 834 (927)
Q Consensus 755 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~ 834 (927)
........ .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .... .+..+....
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILK----RVETGKYAF 241 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH----HHHHCCCCC
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HHHH----HHHcCCCCC
Confidence 87644322 122347889999999876 4899999999999999999999999743321 1111 111221111
Q ss_pred eccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 835 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 835 ~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.. + ... .....+.+++.+||+.||++|||++|+++
T Consensus 242 ~~-~-~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL-P-QWR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS-G-GGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc-h-hhh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 0 001 12346889999999999999999999987
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7.4e-36 Score=335.21 Aligned_cols=259 Identities=21% Similarity=0.261 Sum_probs=196.4
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecC-----ceEEE
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 678 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~-----~~~~L 678 (927)
.|.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 4567889999999999999987 68999999997543 33456788999999999999999999987654 67899
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 92 v~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 999997 699999873 468999999999999999999998 999999999999999999999999999998764
Q ss_pred ccccc---------cccccccCCCccCCCccC-CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhh
Q 002410 759 EDLTH---------ISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 828 (927)
Q Consensus 759 ~~~~~---------~~~~~~gt~~Y~APE~l~-~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~ 828 (927)
..... ......||+.|+|||++. +..++.++|||||||++|||++|+.||...+...... .+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~ 240 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL---LIFGIIG 240 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH---HHHHHhC
Confidence 32211 112245899999999875 4678999999999999999999999998544321111 1111110
Q ss_pred cCC----eeeeccc-------ccc-------CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 829 KGD----VISIVDP-------VLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 829 ~~~----~~~~~d~-------~l~-------~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
... ......+ .+. ..........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000000 000 0000122346789999999999999999999986
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.3e-35 Score=333.47 Aligned_cols=200 Identities=28% Similarity=0.314 Sum_probs=170.5
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CC-----ceeeeeeeeecCceEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HR-----NLVPLIGYCEEEHQRI 677 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-Hp-----nIv~l~~~~~~~~~~~ 677 (927)
..|++.+.||+|+||+||+|... +++.||||+++.. .....++.+|+++++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45777899999999999999877 5889999999753 334567788999998885 44 4999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc--CCCcEEEeeccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSR 755 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld--~~~~~kL~DFGla~ 755 (927)
+||||++ |+|.+++... ....+++..+..++.|++.||+|||+ ++.+|+||||||+|||++ .++.+||+|||+++
T Consensus 133 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 9999996 5999999854 23568999999999999999999994 137999999999999994 47889999999998
Q ss_pred cccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCccc
Q 002410 756 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 812 (927)
Q Consensus 756 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~ 812 (927)
...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 210 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 764332 23468999999999999999999999999999999999999998543
No 235
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-35 Score=331.86 Aligned_cols=265 Identities=19% Similarity=0.250 Sum_probs=201.3
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CC-cEEEEEEccCccchhHHHHHHHHHHHHhcCCCc------eeeeeeeeec
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DG-KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEE 672 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g-~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hpn------Iv~l~~~~~~ 672 (927)
+.....|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++..
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 333456788899999999999999976 34 68999999754 344567889999999997766 8999999999
Q ss_pred CceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccc------------
Q 002410 673 EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL------------ 740 (927)
Q Consensus 673 ~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILl------------ 740 (927)
.+..++||||+ +++|.+.+... ....+++..++.++.||+.||+|||+ ++|+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 66777777643 23568999999999999999999998 899999999999999
Q ss_pred -------cCCCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 002410 741 -------DINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 813 (927)
Q Consensus 741 -------d~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~ 813 (927)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 568899999999998644322 234689999999999999999999999999999999999999974433
Q ss_pred cchhhHHHHHHHhh-----hcCCeee-ecccc---------------------ccCCCCHHHHHHHHHHHHHhhccCCCC
Q 002410 814 GAELNIVHWARSMI-----KKGDVIS-IVDPV---------------------LIGNVKIESIWRIAEVAIQCVEQRGFS 866 (927)
Q Consensus 814 ~~~~~l~~~~~~~~-----~~~~~~~-~~d~~---------------------l~~~~~~~~~~~l~~Li~~Cl~~dP~~ 866 (927)
.+............ ....... ..... ............+.+|+.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 22111111110000 0000000 00000 000112234557899999999999999
Q ss_pred CCCHHHHHH
Q 002410 867 RPKMQEIVL 875 (927)
Q Consensus 867 RPs~~eVl~ 875 (927)
|||++|+++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999999985
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=332.21 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=193.8
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce------E
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------R 676 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~------~ 676 (927)
.|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+. .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 4566789999999999999986 68999999987542 2345678999999999999999999999977653 4
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||++ ++|.+++. ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 99999997 68887764 348999999999999999999998 9999999999999999999999999999987
Q ss_pred ccccccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcC-----
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG----- 830 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~----- 830 (927)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...+..+. ...+.......
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFV 248 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHH
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHH
Confidence 5432 223458999999999876 6789999999999999999999999975443211 11111100000
Q ss_pred -------------CeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 831 -------------DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 831 -------------~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.......+.+ ..........+.+++.+||+.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000 01112234578899999999999999999999863
No 237
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-35 Score=333.03 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=193.9
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeeeecCceE------
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR------ 676 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~------ 676 (927)
.|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 5667889999999999999876 68999999997642 33457789999999999999999999999876654
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
++||||++ ++|.+.+. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 123 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 68888874 348999999999999999999998 8999999999999999999999999999986
Q ss_pred ccccccccccccccCCCccCCCccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+..+. +.. +....... ..+.
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~-i~~~~~~~-~~~~ 265 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQ-ILKVTGVP-GTEF 265 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCC-CHHH
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHH-HHHHhCCC-cHHH
Confidence 5433 223458999999999877 6889999999999999999999999975433211 111 11100000 0000
Q ss_pred ---------------ccccccC---CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 836 ---------------VDPVLIG---NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 836 ---------------~d~~l~~---~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+...... .........+.+|+.+||+.||++|||++|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000 0001123478899999999999999999999864
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.4e-35 Score=327.82 Aligned_cols=253 Identities=26% Similarity=0.345 Sum_probs=177.5
Q ss_pred HHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccc-hhHHHHHHHHH-HHHhcCCCceeeeeeeeecCceEEEEEEe
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVA-LLSRIHHRNLVPLIGYCEEEHQRILVYEY 682 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-~~~~~~~~E~~-~L~~l~HpnIv~l~~~~~~~~~~~LV~E~ 682 (927)
.|++.+.||+|+||.||+|..+ +|+.||||+++.... ....++..|+. +++.++||||+++++++...+..++||||
T Consensus 23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3aln_A 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL 102 (327)
T ss_dssp SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEee
Confidence 4556789999999999999986 689999999976432 33455666666 67778999999999999999999999999
Q ss_pred cCCCCHHHHhccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcccccCCCcEEEeeccccccccc
Q 002410 683 MHNGTLRDRLHGS--VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 683 ~~~gsL~~~L~~~--~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~ 759 (927)
+++ +|.+++... .....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 975 887777531 125678999999999999999999998 7 999999999999999999999999999987644
Q ss_pred cccccccccccCCCccCCCcc----CCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 760 DLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 760 ~~~~~~~~~~gt~~Y~APE~l----~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
... .....|++.|+|||++ .+..++.++|||||||++|||++|+.||...... .+...... .+..
T Consensus 179 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~-~~~~--- 247 (327)
T 3aln_A 179 SIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-----FDQLTQVV-KGDP--- 247 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCC-CSCC---
T ss_pred ccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-----HHHHHHHh-cCCC---
Confidence 322 2223589999999998 4567899999999999999999999999732211 01111111 1111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+.+...........+.+++.+||+.||++||++.|+++
T Consensus 248 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 --PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111123347889999999999999999999976
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.7e-35 Score=327.22 Aligned_cols=250 Identities=20% Similarity=0.274 Sum_probs=170.8
Q ss_pred HHhhc-ccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeeeeec----CceEEEE
Q 002410 606 TNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 679 (927)
Q Consensus 606 ~~~~~-~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~----~~~~~LV 679 (927)
.|.+. +.||+|+||.||+|..+ +|+.||||++.... ....+....++.++||||+++++++.. +...++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 45553 56999999999999987 68999999987531 122223334566799999999999865 4568999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC---CCcEEEeecccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 756 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFGla~~ 756 (927)
|||+++|+|.+++... ....+++.+++.++.||+.||+|||+ ++|+||||||+||+++. ++.+||+|||+++.
T Consensus 105 ~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 105 MECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999999999854 34579999999999999999999998 89999999999999976 45599999999986
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
..... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||......... ......+..+..
T Consensus 181 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~---- 250 (336)
T 3fhr_A 181 TTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS---PGMKRRIRLGQY---- 250 (336)
T ss_dssp C-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred ccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---hhHHHhhhcccc----
Confidence 54322 22345799999999999889999999999999999999999999743322110 000111111000
Q ss_pred cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 837 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 837 d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.............+.+++.+||+.||++|||++|+++
T Consensus 251 --~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 251 --GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000001122346889999999999999999999997
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.7e-35 Score=338.19 Aligned_cols=247 Identities=24% Similarity=0.347 Sum_probs=185.4
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEEEecCCCCH
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHNGTL 688 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~E~~~~gsL 688 (927)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||||++ |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 5789999999998777778999999998643 235678899999987 89999999999999999999999995 699
Q ss_pred HHHhccCCCCC----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCC-------------CcEEEeec
Q 002410 689 RDRLHGSVNQK----PLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------MRAKVSDF 751 (927)
Q Consensus 689 ~~~L~~~~~~~----~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~-------------~~~kL~DF 751 (927)
.+++....... ...+..++.++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99998542111 11334567899999999999998 999999999999999754 48999999
Q ss_pred cccccccccccc---cccccccCCCccCCCccCC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHH
Q 002410 752 GLSRQAEEDLTH---ISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 820 (927)
Q Consensus 752 Gla~~~~~~~~~---~~~~~~gt~~Y~APE~l~~-------~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~ 820 (927)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||..... .. .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~-~~---~ 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS-RE---S 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT-HH---H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh-hH---H
Confidence 999876543322 1223468999999999865 678999999999999999999 9999963322 11 1
Q ss_pred HHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 821 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 821 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
........ . +.............+.+++.+||+.||++||++.||++
T Consensus 249 ~i~~~~~~---~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NIIRGIFS---L-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHTCCC---C-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCCCC---c-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111111 0 01111123345568899999999999999999999986
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=324.56 Aligned_cols=244 Identities=26% Similarity=0.412 Sum_probs=190.6
Q ss_pred hHHHHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch------hHHHHHHHHHHHHhc----CCCceeeeeee
Q 002410 601 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRI----HHRNLVPLIGY 669 (927)
Q Consensus 601 el~~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~------~~~~~~~E~~~L~~l----~HpnIv~l~~~ 669 (927)
+.....|++.+.||+|+||.||+|+.. +++.||||++...... ....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 455677888999999999999999875 6889999999754321 223466799999998 89999999999
Q ss_pred eecCceEEEEEEe-cCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc-CCCcEE
Q 002410 670 CEEEHQRILVYEY-MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAK 747 (927)
Q Consensus 670 ~~~~~~~~LV~E~-~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld-~~~~~k 747 (927)
+...+..++|+|+ +++++|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 789999999984 4568999999999999999999998 8999999999999999 889999
Q ss_pred EeeccccccccccccccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHh
Q 002410 748 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 826 (927)
Q Consensus 748 L~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~ 826 (927)
|+|||+++...... .....|+..|+|||++.+..+ +.++||||||+++|||++|+.||.... .. .
T Consensus 181 l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~---~--- 246 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EI---L--- 246 (312)
T ss_dssp ECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH---H---
T ss_pred EEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HH---h---
Confidence 99999998765432 223458999999999876665 458999999999999999999997221 11 0
Q ss_pred hhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 827 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 827 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
. ... .+. ......+.+++.+||+.||++||+++|+++.
T Consensus 247 -~-~~~------~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 -E-AEL------HFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -H-TCC------CCC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -h-hcc------CCc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 011 1122467899999999999999999999863
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=319.76 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=179.1
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch-h-HHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-R-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~-~-~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
..|++.+.||+|+||.||+|... +|+.||||++...... . .+.+.++..+++.++||||+++++++.+++..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 34667889999999999999986 6899999999764332 2 2344555567888899999999999999999999999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCcccccCCCcEEEeecccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 760 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~-~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~ 760 (927)
|+ ++.+..+... ....+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 105 LM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 99 5566555542 24568999999999999999999997 5 9999999999999999999999999999765443
Q ss_pred ccccccccccCCCccCCCccC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 761 LTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 761 ~~~~~~~~~gt~~Y~APE~l~-----~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
.. .....+++.|+|||++. +..++.++|||||||++|||++|+.||...... .... ......... .
T Consensus 179 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~---~~~~~~~~~-~- 249 (318)
T 2dyl_A 179 KA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--FEVL---TKVLQEEPP-L- 249 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHH---HHHHHSCCC-C-
T ss_pred cc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--HHHH---HHHhccCCC-C-
Confidence 22 22345899999999984 557889999999999999999999999732221 1111 111211111 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
+.. .......+.+++.+||+.||++||+++|+++.
T Consensus 250 ----~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 ----LPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ----CCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----CCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000 00122368899999999999999999999873
No 243
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.3e-35 Score=349.65 Aligned_cols=270 Identities=22% Similarity=0.319 Sum_probs=207.5
Q ss_pred HHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCc-cchhHHHHHHHHHHHHhcCCCceeeeeeeeec------CceE
Q 002410 605 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 676 (927)
Q Consensus 605 ~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~-~~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~------~~~~ 676 (927)
..|++.+.||+|+||.||+|.+. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.. ++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 57888999999999999999875 5899999998764 33445779999999999999999999998765 6778
Q ss_pred EEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCc---EEEeeccc
Q 002410 677 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGL 753 (927)
Q Consensus 677 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~---~kL~DFGl 753 (927)
++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 9999999999999999865555579999999999999999999998 99999999999999997665 99999999
Q ss_pred cccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCee
Q 002410 754 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 833 (927)
Q Consensus 754 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 833 (927)
+........ .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..|...........
T Consensus 171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------
T ss_pred ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchh
Confidence 987654322 23346899999999999999999999999999999999999999743211 11111110000000
Q ss_pred eecc----------c--cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHH-----HHHHHHhhhhhc
Q 002410 834 SIVD----------P--VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-----IVLAIQDSIKIE 884 (927)
Q Consensus 834 ~~~d----------~--~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~e-----Vl~~L~~~~~~e 884 (927)
.... . .............+.+++.+||+.||++|||++| ..+.+++++...
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 0000 0 0112234456678999999999999999999988 566777766544
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.7e-35 Score=325.71 Aligned_cols=240 Identities=24% Similarity=0.379 Sum_probs=196.4
Q ss_pred HHHHhhcccccccccEEEEEEEEC-CCcEEEEEEccCccch------hHHHHHHHHHHHHhcC--CCceeeeeeeeecCc
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIH--HRNLVPLIGYCEEEH 674 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~------~~~~~~~E~~~L~~l~--HpnIv~l~~~~~~~~ 674 (927)
...|++.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|+.++++++ |+||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 345677899999999999999875 6889999998754221 2245778999999996 599999999999999
Q ss_pred eEEEEEEecCC-CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCccccc-CCCcEEEeecc
Q 002410 675 QRILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFG 752 (927)
Q Consensus 675 ~~~LV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld-~~~~~kL~DFG 752 (927)
..++|+|++.+ ++|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++ +++.+||+|||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999976 899999974 4578999999999999999999998 9999999999999999 78999999999
Q ss_pred ccccccccccccccccccCCCccCCCccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCC
Q 002410 753 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD 831 (927)
Q Consensus 753 la~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~-s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~ 831 (927)
+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .. .. +.
T Consensus 196 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~~----~~-~~ 259 (320)
T 3a99_A 196 SGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EI----IR-GQ 259 (320)
T ss_dssp TCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HH----HH-CC
T ss_pred ccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------hh----hc-cc
Confidence 998765432 223458999999999876655 688999999999999999999997321 00 11 11
Q ss_pred eeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 832 VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 832 ~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
. . .... ....+.+++.+||+.||++||+++||++
T Consensus 260 ~--~----~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 V--F----FRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C--C----CSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c--c----cccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 1111 1246889999999999999999999987
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-34 Score=332.01 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=184.8
Q ss_pred HHhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEEEEEecC
Q 002410 606 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMH 684 (927)
Q Consensus 606 ~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~LV~E~~~ 684 (927)
.+++.+.||+|+||+||.....+|+.||||++..... ..+.+|+++|+++ +||||+++++++.+.+..++||||++
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 3556789999999997766666799999999875432 2356799999999 79999999999999999999999996
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC-----CCcEEEeeccccccccc
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-----NMRAKVSDFGLSRQAEE 759 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~-----~~~~kL~DFGla~~~~~ 759 (927)
|+|.+++... .....+..++.++.||+.||+|||+ ++|+||||||+|||++. ...+||+|||+++....
T Consensus 102 -g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 -ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp -EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred -CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 6999999854 2334555678999999999999999 99999999999999953 33588999999987654
Q ss_pred ccc--ccccccccCCCccCCCccC---CCCCCcchhHHHHHHHHHHHHh-CCCCCCcccccchhhHHHHHHHhhhcCCee
Q 002410 760 DLT--HISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 833 (927)
Q Consensus 760 ~~~--~~~~~~~gt~~Y~APE~l~---~~~~s~ksDVwSlGvlL~eLlt-G~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~ 833 (927)
... .......||+.|+|||++. ...++.++|||||||++|||++ |..||..... .. .. ........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-~~---~~---~~~~~~~~- 247 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-RQ---AN---ILLGACSL- 247 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-HH---HH---HHTTCCCC-
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-HH---HH---HHhccCCc-
Confidence 321 1223456999999999997 4567889999999999999999 9999963221 11 11 11111111
Q ss_pred eeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 834 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 834 ~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
.... ........+.+|+.+||+.||++|||++||++
T Consensus 248 ~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 248 DCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111 11223445789999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.6e-33 Score=307.62 Aligned_cols=237 Identities=14% Similarity=0.196 Sum_probs=185.2
Q ss_pred HHHHHHhhcccccccccEEEEEEEECC-CcEEEEEEccCccc---hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEE
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 677 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~ 677 (927)
+....|++.+.||+|+||.||+|+... ++.||||++..... ...+.+.+|+.++++++||||+++++++.+++..+
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 334567788999999999999999874 89999999976432 33478999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 678 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 678 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
+||||+++++|.++++. . ....++.+++.|++.||+|||+ ++|+||||||+|||++.++.+||++++
T Consensus 108 lv~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EEEECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEEEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 99999999999999963 2 3556788999999999999998 999999999999999999999998443
Q ss_pred cccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeecc
Q 002410 758 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 837 (927)
Q Consensus 758 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 837 (927)
|++| ++.++|||||||++|||++|+.||............ .... .+... .
T Consensus 175 ----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~-~~~~~---~ 224 (286)
T 3uqc_A 175 ----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDT-AGQPI---E 224 (286)
T ss_dssp ----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCT-TSCBC---C
T ss_pred ----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHh-ccCCC---C
Confidence 3333 688999999999999999999999854332110000 0000 00000 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhcc
Q 002410 838 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 885 (927)
Q Consensus 838 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~L~~~~~~e~ 885 (927)
+ ..........+.+++.+||+.||++| |+.|+++.|+++...+.
T Consensus 225 ~---~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 225 P---ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp H---HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred h---hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 0 00111223468899999999999999 99999999999877654
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.9e-34 Score=347.58 Aligned_cols=241 Identities=18% Similarity=0.287 Sum_probs=194.3
Q ss_pred HHHHhhcccccccccEEEEEEEEC--CCcEEEEEEccCcc-chhHHHHHHHHHHHHhcCCCceeeeeeeeecCce-----
Q 002410 604 EATNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----- 675 (927)
Q Consensus 604 ~~~~~~~~~LG~G~~G~Vy~a~~~--~g~~vAvK~l~~~~-~~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~----- 675 (927)
...|++.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 356778899999999999999986 58999999987543 3445678999999999999999999999987655
Q ss_pred EEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 676 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 676 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
.++||||+++++|.+++.. .+++.+++.++.||+.||+|||+ ++|+||||||+|||++.+ .+||+|||+++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccch
Confidence 7999999999999887652 68999999999999999999998 999999999999999875 89999999998
Q ss_pred cccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeee
Q 002410 756 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 835 (927)
Q Consensus 756 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~ 835 (927)
..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||....... ..
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------~~-- 285 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------LP-- 285 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS----------------CC--
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc----------------cc--
Confidence 76543 3345899999999987654 889999999999999999998886321110 00
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHhhhh
Q 002410 836 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIK 882 (927)
Q Consensus 836 ~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-s~~eVl~~L~~~~~ 882 (927)
...........+.+++.+||+.||++|| +++++.+.|...+.
T Consensus 286 -----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 -----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp -----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred -----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0000011224688999999999999999 57777777776653
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.7e-33 Score=314.32 Aligned_cols=243 Identities=19% Similarity=0.246 Sum_probs=184.0
Q ss_pred HHHHHHhhcccccccccEEEEEEEECCCcEEEEEEccCcc--------chhHHHHHHHHHHHHhcC---------CCcee
Q 002410 602 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--------SHRTQQFVTEVALLSRIH---------HRNLV 664 (927)
Q Consensus 602 l~~~~~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~--------~~~~~~~~~E~~~L~~l~---------HpnIv 664 (927)
+....|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ ||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 3456788999999999999999998 58999999997542 223477889999999886 55555
Q ss_pred ee-----------------eeeeec-------------CceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 002410 665 PL-----------------IGYCEE-------------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAA 714 (927)
Q Consensus 665 ~l-----------------~~~~~~-------------~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia 714 (927)
++ ++++.+ .+..++||||+++|++.+.+. ...+++..++.++.||+
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----TKLSSLATAKSILHQLT 171 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----TTCCCHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----hcCCCHHHHHHHHHHHH
Confidence 55 444443 678999999999997766664 25689999999999999
Q ss_pred HHHHHHH-hcCCCCeEecCCCCCcccccCCC--------------------cEEEeeccccccccccccccccccccCCC
Q 002410 715 KGLEYLH-TGCNPGIIHRDVKSSNILLDINM--------------------RAKVSDFGLSRQAEEDLTHISSVARGTVG 773 (927)
Q Consensus 715 ~gL~~LH-~~~~~~ivH~DLkp~NILld~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~ 773 (927)
.||+||| + ++|+||||||+|||++.++ .+||+|||+++..... ...||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 8 8999999999999999887 8999999999876532 2368999
Q ss_pred ccCCCccCCCCCCcchhHHHHHHH-HHHHHhCCCCCCcccccchhhHHHHHH-HhhhcCCeeeeccccccCCCCHHHHHH
Q 002410 774 YLDPEYYGNQQLTEKSDVYSFGVV-LLELISGKKPVSVEDFGAELNIVHWAR-SMIKKGDVISIVDPVLIGNVKIESIWR 851 (927)
Q Consensus 774 Y~APE~l~~~~~s~ksDVwSlGvl-L~eLltG~~Pf~~~~~~~~~~l~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~ 851 (927)
|+|||++.+.. +.++||||+|++ .+++++|..||... ....... ......... ..............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccC----cccchhhhhhcCHH
Confidence 99999998766 899999998777 77899999998521 0001111 111111110 00011112345668
Q ss_pred HHHHHHHhhccCCCCCCCHHHHH
Q 002410 852 IAEVAIQCVEQRGFSRPKMQEIV 874 (927)
Q Consensus 852 l~~Li~~Cl~~dP~~RPs~~eVl 874 (927)
+.+|+.+||+.| |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999976 899887
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-32 Score=301.30 Aligned_cols=225 Identities=21% Similarity=0.303 Sum_probs=176.1
Q ss_pred Hhhc-ccccccccEEEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHH-HhcCCCceeeeeeeeec----CceEEEE
Q 002410 607 NNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALL-SRIHHRNLVPLIGYCEE----EHQRILV 679 (927)
Q Consensus 607 ~~~~-~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L-~~l~HpnIv~l~~~~~~----~~~~~LV 679 (927)
|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|+.++ +.++||||+++++++.. ....++|
T Consensus 19 y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 93 (299)
T 3m2w_A 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93 (299)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred hhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence 3444 77999999999999985 6899999998642 4567888888 55589999999999876 6788999
Q ss_pred EEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccC---CCcEEEeecccccc
Q 002410 680 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 756 (927)
Q Consensus 680 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~---~~~~kL~DFGla~~ 756 (927)
|||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||++..
T Consensus 94 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 94 MECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp ECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 9999999999999854 34579999999999999999999998 99999999999999998 78899999998864
Q ss_pred ccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCCcccccchhhHHHHHHHhhhcCCeeeec
Q 002410 757 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 836 (927)
Q Consensus 757 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 836 (927)
.. +..++.++|||||||++|||++|+.||........ .......+.
T Consensus 170 ~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~ 215 (299)
T 3m2w_A 170 TT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIR 215 (299)
T ss_dssp CT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSC
T ss_pred cc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHh
Confidence 32 23567899999999999999999999973322110 000000000
Q ss_pred cccccCCCC----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 002410 837 DPVLIGNVK----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 876 (927)
Q Consensus 837 d~~l~~~~~----~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~~ 876 (927)
.... ... ......+.+++.+||+.||++|||++|+++.
T Consensus 216 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 216 MGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp TTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 001 1123478899999999999999999999873
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=7.6e-33 Score=318.27 Aligned_cols=238 Identities=16% Similarity=0.123 Sum_probs=177.9
Q ss_pred hhcccccccccEEEEEEEEC-CCcEEEEEEccCccc---hhHHHHHHHHHHHHhcCC-Cceeee---------eee----
Q 002410 608 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHH-RNLVPL---------IGY---- 669 (927)
Q Consensus 608 ~~~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~---~~~~~~~~E~~~L~~l~H-pnIv~l---------~~~---- 669 (927)
...+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|.... ...
T Consensus 81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 3dzo_A 81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 160 (413)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred EEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence 34678999999999999965 699999999874322 235779999999999977 322111 111
Q ss_pred --------eec-----CceEEEEEEecCCCCHHHHhccC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002410 670 --------CEE-----EHQRILVYEYMHNGTLRDRLHGS----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRD 732 (927)
Q Consensus 670 --------~~~-----~~~~~LV~E~~~~gsL~~~L~~~----~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~D 732 (927)
+.. ....+++|+++ +++|.++++.. .....+++..++.++.||++||+|||+ ++|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrD 236 (413)
T 3dzo_A 161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTY 236 (413)
T ss_dssp C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCC
Confidence 111 12356677765 68999988421 134568888999999999999999998 9999999
Q ss_pred CCCCcccccCCCcEEEeeccccccccccccccccccccCCCccCCCcc----------CCCCCCcchhHHHHHHHHHHHH
Q 002410 733 VKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY----------GNQQLTEKSDVYSFGVVLLELI 802 (927)
Q Consensus 733 Lkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l----------~~~~~s~ksDVwSlGvlL~eLl 802 (927)
|||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|||+
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred cccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999998875543 233457 999999999 6667899999999999999999
Q ss_pred hCCCCCCcccccchhhHHHHHHHhhhcCCeeeeccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 002410 803 SGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 875 (927)
Q Consensus 803 tG~~Pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs~~eVl~ 875 (927)
+|+.||.......... .++.. ... .+..+.+|+.+||+.||++||++.|+++
T Consensus 312 tg~~Pf~~~~~~~~~~---------------~~~~~--~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 312 CADLPNTDDAALGGSE---------------WIFRS--CKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HSSCCCCTTGGGSCSG---------------GGGSS--CCC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HCCCCCCCcchhhhHH---------------HHHhh--ccc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999997433221100 00100 001 1246889999999999999999877753
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.3e-27 Score=284.91 Aligned_cols=187 Identities=17% Similarity=0.138 Sum_probs=131.7
Q ss_pred ccccccccEEEEEEEEC-CCcEEEEEEccCcc----------chhHHHHHHHHHHHHhc-CCCceeeeeeeeecCceEEE
Q 002410 611 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----------SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 678 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~----------~~~~~~~~~E~~~L~~l-~HpnIv~l~~~~~~~~~~~L 678 (927)
...+.|+.|.+..++.. -|+.+++|++.... ....++|.+|+++|+++ .|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 35667777776665432 48899999996531 12346799999999999 79999999999999999999
Q ss_pred EEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 679 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 679 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
||||++|++|.++|.. ..+++.. +|+.||+.||+|||+ +|||||||||+|||++.+|++||+|||+|+...
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999984 4556654 588999999999999 999999999999999999999999999998765
Q ss_pred ccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 002410 759 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPV 808 (927)
Q Consensus 759 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf 808 (927)
..... .....||++|||||++.+ .+..++|+||+|+++++|.++..++
T Consensus 391 ~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 44332 233569999999999976 4677899999999988887665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=3.9e-24 Score=253.47 Aligned_cols=183 Identities=17% Similarity=0.204 Sum_probs=146.5
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccc--------hhHHHHHHHHHHHHhcCCCceeeeeeeeecCceEEEEEE
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~--------~~~~~~~~E~~~L~~l~HpnIv~l~~~~~~~~~~~LV~E 681 (927)
.+.||+|+||.||+|... ++.+++|+...... ...+++.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999554 78899988643211 123568999999999999999977666667777899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccc
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 761 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~ 761 (927)
|+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999973 56899999999999998 99999999999999998 99999999999875532
Q ss_pred ccc------ccccccCCCccCCCccCC--CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 002410 762 THI------SSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVS 809 (927)
Q Consensus 762 ~~~------~~~~~gt~~Y~APE~l~~--~~~s~ksDVwSlGvlL~eLltG~~Pf~ 809 (927)
... .....||+.|||||++.. ..|+.++|+|+..+-..+.+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211 234569999999999976 567888999999999998888877764
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.83 E-value=2.3e-21 Score=210.80 Aligned_cols=141 Identities=15% Similarity=0.113 Sum_probs=116.2
Q ss_pred hcccccccccEEEEEEEECCCcEEEEEEccCccc------------------hhHHHHHHHHHHHHhcCCCceeeeeeee
Q 002410 609 FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS------------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 670 (927)
Q Consensus 609 ~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~------------------~~~~~~~~E~~~L~~l~HpnIv~l~~~~ 670 (927)
+.+.||+|+||.||+|.+.+|+.||||+++.... .....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 4589999999999999997799999999864321 13467899999999999 5 6677755
Q ss_pred ecCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEee
Q 002410 671 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 750 (927)
Q Consensus 671 ~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~D 750 (927)
.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+ ++|+||||||+|||++ ++.+||+|
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECC
T ss_pred ec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 44 55699999999999988 531 2345799999999999998 9999999999999999 99999999
Q ss_pred ccccccccccccccccccccCCCccCCCccC
Q 002410 751 FGLSRQAEEDLTHISSVARGTVGYLDPEYYG 781 (927)
Q Consensus 751 FGla~~~~~~~~~~~~~~~gt~~Y~APE~l~ 781 (927)
||+++. +..++|||++.
T Consensus 236 FG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 236 FPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp CTTCEE--------------TTSTTHHHHHH
T ss_pred CCCCeE--------------CCCCCHHHHHH
Confidence 999863 34578888874
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.3e-17 Score=178.79 Aligned_cols=135 Identities=23% Similarity=0.246 Sum_probs=105.8
Q ss_pred hhcccccccccEEEEEEEE-CCCcE--EEEEEccCccch------------------------hHHHHHHHHHHHHhcCC
Q 002410 608 NFCKKIGKGSFGSVYYGKM-KDGKE--VAVKIMADSCSH------------------------RTQQFVTEVALLSRIHH 660 (927)
Q Consensus 608 ~~~~~LG~G~~G~Vy~a~~-~~g~~--vAvK~l~~~~~~------------------------~~~~~~~E~~~L~~l~H 660 (927)
.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+++|++++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 4568899999999999998 67989 999987543111 12368899999999988
Q ss_pred Cce--eeeeeeeecCceEEEEEEecCC-C----CHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecC
Q 002410 661 RNL--VPLIGYCEEEHQRILVYEYMHN-G----TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH-TGCNPGIIHRD 732 (927)
Q Consensus 661 pnI--v~l~~~~~~~~~~~LV~E~~~~-g----sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH-~~~~~~ivH~D 732 (927)
+++ ..+++. +..+|||||+.+ | +|.+.... .++..+..++.|++.||.||| + .+|+|||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givHrD 196 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVHAD 196 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence 764 333332 356899999942 4 67766542 234567889999999999999 7 8999999
Q ss_pred CCCCcccccCCCcEEEeeccccccc
Q 002410 733 VKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 733 Lkp~NILld~~~~~kL~DFGla~~~ 757 (927)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999988 9999999999754
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.63 E-value=4.3e-16 Score=171.74 Aligned_cols=147 Identities=27% Similarity=0.512 Sum_probs=126.1
Q ss_pred CChhHHHHHHHhhhhcc----CCCCCC-CCCCCCCCccEEEeCCC-CCceEEEEecCCCCcc--cCCccccCCcccceec
Q 002410 368 KTEWQDEALRSISDESE----RTNDRG-DPCVPVPWEWVTCSTTT-PPRITKIALSGKNLKG--EIPPELKNMEALTELW 439 (927)
Q Consensus 368 ~t~~~~~al~~~~~~~~----~~~w~g-dpC~~~~w~~~~c~~~~-~~~l~~L~L~~n~l~g--~ip~~l~~l~~L~~L~ 439 (927)
+...+.+||.++|..+. ..+|.. .+||.+.|.||.|+... ..+|+.|+|++|+++| .+|..|+++++|++|+
T Consensus 3 c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~ 82 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred CCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeee
Confidence 34456689999998874 368963 34544569999997642 3689999999999999 9999999999999999
Q ss_pred ccC-CCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccccccCCCCCCCccccC--CceeeeecCCCC
Q 002410 440 LDG-NFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 440 Ls~-N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~ 514 (927)
|++ |++++.+|. |+++++|++|+|++|+++|.+|..++++++|+.|+|++|.++|.+|..+.. .+..+.+.+|..
T Consensus 83 L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 995 999999985 999999999999999999999999999999999999999999999988754 677778888764
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=3.1e-15 Score=185.45 Aligned_cols=140 Identities=20% Similarity=0.275 Sum_probs=120.9
Q ss_pred HHHHHHHhhhhccCCCCCCCC------CCCCCC------------ccEEEeCCCCCceEEEEecCCCCcccCCccccCCc
Q 002410 372 QDEALRSISDESERTNDRGDP------CVPVPW------------EWVTCSTTTPPRITKIALSGKNLKGEIPPELKNME 433 (927)
Q Consensus 372 ~~~al~~~~~~~~~~~w~gdp------C~~~~w------------~~~~c~~~~~~~l~~L~L~~n~l~g~ip~~l~~l~ 433 (927)
+..||.+++..+...+|+.+. |++|.| .||.|++. .+|+.|+|++|+|+|.+|++|++|+
T Consensus 270 d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~--~~V~~L~Ls~~~L~G~ip~~l~~L~ 347 (876)
T 4ecn_A 270 DYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN--GRVTGLSLAGFGAKGRVPDAIGQLT 347 (876)
T ss_dssp HHHHHHHHHHHTTGGGCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT--SCEEEEECTTTCCEEEECGGGGGCT
T ss_pred HHHHHHHHHHHcCCCCCCcCCCcccccCCccccccccccccccCcCceEecCC--CCEEEEECccCCCCCcCchHHhccc
Confidence 448999999998777896432 223689 99999883 6999999999999999999999999
Q ss_pred ccceecc-cCCCCCCC----------------------------------------------------------------
Q 002410 434 ALTELWL-DGNFLTGP---------------------------------------------------------------- 448 (927)
Q Consensus 434 ~L~~L~L-s~N~l~g~---------------------------------------------------------------- 448 (927)
+|+.|+| ++|.++|.
T Consensus 348 ~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~ 427 (876)
T 4ecn_A 348 ELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKD 427 (876)
T ss_dssp TCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCT
T ss_pred cceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccccchhh
Confidence 9999999 88766554
Q ss_pred ------------CC-CcCcccccceeecccccccC-----------------CCCCcCC--CccccccccccccCCCCCC
Q 002410 449 ------------LP-DMSRLIDLRIVHLENNELTG-----------------SLPSYMG--SLPNLQELHIENNSFVGEI 496 (927)
Q Consensus 449 ------------~p-~~~~l~~L~~L~Ls~N~l~g-----------------~iP~~l~--~l~~L~~L~l~~N~l~g~i 496 (927)
+| .|++|++|+.|+|++|+|+| .+|..++ +|++|+.|+|++|++.|.+
T Consensus 428 l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~i 507 (876)
T 4ecn_A 428 TQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQL 507 (876)
T ss_dssp TTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSC
T ss_pred ceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccC
Confidence 66 48999999999999999998 4999988 9999999999999999999
Q ss_pred CccccC--CceeeeecCCC
Q 002410 497 PPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 497 P~~~~~--~~~~~~~~~N~ 513 (927)
|..+.. .+..+.+.+|.
T Consensus 508 P~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 508 PDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CGGGGGCSSCCEEECTTCT
T ss_pred hHHHhCCCCCCEEECcCCC
Confidence 987765 67778888887
No 257
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=1.4e-15 Score=170.27 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=98.2
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCccc--------------hhHHH--------HHHHHHHHHhcCCCcee
Q 002410 607 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------------HRTQQ--------FVTEVALLSRIHHRNLV 664 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~--------------~~~~~--------~~~E~~~L~~l~HpnIv 664 (927)
|++.+.||+|++|.||+|...+|+.||||+++.... ..... ..+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 556789999999999999999999999998753210 00111 23456666666444332
Q ss_pred eeeeeeecCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCC
Q 002410 665 PLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 744 (927)
Q Consensus 665 ~l~~~~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~ 744 (927)
...-+.. ...+|||||++|++|.++... .....++.||+.+|.+||+ .|||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 1111111 223799999999888765431 1345688999999999998 8999999999999998877
Q ss_pred ----------cEEEeeccccccc
Q 002410 745 ----------RAKVSDFGLSRQA 757 (927)
Q Consensus 745 ----------~~kL~DFGla~~~ 757 (927)
.+.|+||+-+...
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEET
T ss_pred CcccccccccceEEEEeCCcccC
Confidence 3899999976543
No 258
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.49 E-value=5.2e-14 Score=143.74 Aligned_cols=110 Identities=23% Similarity=0.318 Sum_probs=99.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++.++.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+. |.+|++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 30 ~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 108 (193)
T 2wfh_A 30 PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS 108 (193)
T ss_dssp CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEE
Confidence 458999999999999 8999999999999999999999999885 99999999999999999988888999999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
|++|.|+ .+|...+. .+..+.+.+||+.|.+.
T Consensus 109 L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 109 LHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCC-eeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9999999 67765443 67788999999998753
No 259
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.48 E-value=2.4e-14 Score=173.24 Aligned_cols=138 Identities=20% Similarity=0.247 Sum_probs=117.1
Q ss_pred HHHHHHHhhhhccCC-------------CCCCCCCCCCCC---ccEEEeCCCCCceEEEEecCCCCcccCCccccCCccc
Q 002410 372 QDEALRSISDESERT-------------NDRGDPCVPVPW---EWVTCSTTTPPRITKIALSGKNLKGEIPPELKNMEAL 435 (927)
Q Consensus 372 ~~~al~~~~~~~~~~-------------~w~gdpC~~~~w---~~~~c~~~~~~~l~~L~L~~n~l~g~ip~~l~~l~~L 435 (927)
+..||.+++...+.. +|+.+.. +|.| .||.|+.. .+|+.|+|++|+++|.+|++|++|++|
T Consensus 31 d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~-~c~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 31 DYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKE-LDMWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHTTGGGCCCCC------CCCCCSSC-GGGTTCCTTEEECTT--CCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCC-cccccCCCCeEEcCC--CCEEEEEecCcccCCcCChHHhcCccc
Confidence 448999998876533 4653321 2469 99999765 699999999999999999999999999
Q ss_pred ceecccCCC-----------------------------------------------------------------------
Q 002410 436 TELWLDGNF----------------------------------------------------------------------- 444 (927)
Q Consensus 436 ~~L~Ls~N~----------------------------------------------------------------------- 444 (927)
+.|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999984
Q ss_pred -------CCCCCC-CcCcccccceeecccccccCC-----------------CCCcCC--CccccccccccccCCCCCCC
Q 002410 445 -------LTGPLP-DMSRLIDLRIVHLENNELTGS-----------------LPSYMG--SLPNLQELHIENNSFVGEIP 497 (927)
Q Consensus 445 -------l~g~~p-~~~~l~~L~~L~Ls~N~l~g~-----------------iP~~l~--~l~~L~~L~l~~N~l~g~iP 497 (927)
|+| +| .+++|++|++|+|++|+|+|. +|..++ ++++|+.|+|++|++.|.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 445 56 499999999999999999986 999999 99999999999999999999
Q ss_pred ccccC--CceeeeecCCC
Q 002410 498 PALLT--GKVIFKYDNNP 513 (927)
Q Consensus 498 ~~~~~--~~~~~~~~~N~ 513 (927)
..+.. .+..+.+.+|.
T Consensus 267 ~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 267 TFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTTTTCSSCCEEECTTCT
T ss_pred HHHhcCCCCCEEECcCCC
Confidence 88765 67778888886
No 260
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.45 E-value=8.9e-14 Score=141.83 Aligned_cols=123 Identities=19% Similarity=0.222 Sum_probs=106.7
Q ss_pred CCCccEEEeCC--------CCCceEEEEecCCCCcccCCc-cccCCcccceecccCCCCCCCCCC-cCcccccceeeccc
Q 002410 396 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLEN 465 (927)
Q Consensus 396 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~-~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~ 465 (927)
|.|..+.|+.. .+.+++.|+|++|++++..+. .|+++++|+.|+|++|+|++.+|. |.++++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45766776542 234899999999999976665 489999999999999999999885 99999999999999
Q ss_pred ccccCCCCCcCCCccccccccccccCCCCCCCccccC--CceeeeecCCCCCccc
Q 002410 466 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 518 (927)
Q Consensus 466 N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~~ 518 (927)
|+|++..|..|..+++|+.|+|++|+|++.+|..+.. .+..+.+.+|++.|.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999888888999999999999999999887877654 6778899999999864
No 261
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.43 E-value=3.7e-14 Score=175.52 Aligned_cols=111 Identities=32% Similarity=0.442 Sum_probs=102.0
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.+.++.|+|++|+++|.+|.+|++|++|+.|+|++|+|+|.+|+ +++|++|+.|||++|+|+|.||..++++++|+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 35789999999999999999999999999999999999999995 99999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccc-cCCceeeeecCCCCCccc
Q 002410 487 IENNSFVGEIPPAL-LTGKVIFKYDNNPKLHKE 518 (927)
Q Consensus 487 l~~N~l~g~iP~~~-~~~~~~~~~~~N~~~c~~ 518 (927)
|++|+|+|.||..- +.......+.|||.+|+.
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 99999999999753 334455678999999964
No 262
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.41 E-value=4.4e-13 Score=134.49 Aligned_cols=126 Identities=20% Similarity=0.305 Sum_probs=107.0
Q ss_pred CCCCCCCCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCccccccee
Q 002410 391 DPCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIV 461 (927)
Q Consensus 391 dpC~~~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L 461 (927)
+.|. |.|.++.|+.. .+++++.|+|++|++++..+..|.++++|+.|+|++|+|++.++. +..+++|+.|
T Consensus 3 ~~C~-C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (177)
T 2o6r_A 3 SRCS-CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTIL 81 (177)
T ss_dssp TTCE-EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCE-eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEE
Confidence 3463 57888888653 246899999999999977667789999999999999999998886 7999999999
Q ss_pred ecccccccCCCCCcCCCccccccccccccCCCCCCCccccC---CceeeeecCCCCCccc
Q 002410 462 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 518 (927)
Q Consensus 462 ~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~ 518 (927)
+|++|+|++..|..+..+++|+.|+|++|+++ .+|...+. .+..+.+.+|++.|..
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99999999777778899999999999999999 67766533 6778889999998754
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.37 E-value=6.8e-13 Score=138.35 Aligned_cols=112 Identities=19% Similarity=0.191 Sum_probs=97.2
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 35789999999999977777899999999999999999998886 89999999999999999988899999999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~~~ 519 (927)
|++|+|++..|..+.. .+..+.+.+|++.|.+.
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999666766644 67788899999998643
No 264
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.35 E-value=1.3e-12 Score=136.14 Aligned_cols=111 Identities=19% Similarity=0.255 Sum_probs=87.5
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|+..++. |..+++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 5788888888888877788888888888888888888877765 678888888888888888777888888888888888
Q ss_pred cccCCCCCCCccccC--CceeeeecCCCCCcccc
Q 002410 488 ENNSFVGEIPPALLT--GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~~~ 519 (927)
++|+|++..|..+.. .+..+.+.+|++.|.+.
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 888888433333332 56678889999988643
No 265
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.33 E-value=2e-12 Score=135.60 Aligned_cols=116 Identities=22% Similarity=0.304 Sum_probs=90.3
Q ss_pred CCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeeccccc
Q 002410 397 PWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNE 467 (927)
Q Consensus 397 ~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~ 467 (927)
.|.++.|+.. .+++++.|+|++|++++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+
T Consensus 20 s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 20 SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 5888888653 246789999999999988888899999999999999999877765 7888888888888888
Q ss_pred ccCCCCCcCCCccccccccccccCCCCCCCccccC--CceeeeecCCC
Q 002410 468 LTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 468 l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~ 513 (927)
|++..+..|..+++|+.|+|++|+|+ .+|..+.. .+..+.+.+|.
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSC
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCc
Confidence 88666666778888888888888887 77766543 44455555553
No 266
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.31 E-value=2.8e-12 Score=128.05 Aligned_cols=109 Identities=28% Similarity=0.354 Sum_probs=90.8
Q ss_pred EEeCCCCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcc
Q 002410 402 TCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLP 480 (927)
Q Consensus 402 ~c~~~~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~ 480 (927)
.|.|. .+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..++
T Consensus 6 ~C~C~----~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~ 78 (170)
T 3g39_A 6 QCSCS----GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78 (170)
T ss_dssp CCEEE----TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred cCCcC----CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCC
Confidence 36663 357999999998 6887774 8899999999999999886 89999999999999999976666789999
Q ss_pred ccccccccccCCCCCCCcc-cc--CCceeeeecCCCCCccc
Q 002410 481 NLQELHIENNSFVGEIPPA-LL--TGKVIFKYDNNPKLHKE 518 (927)
Q Consensus 481 ~L~~L~l~~N~l~g~iP~~-~~--~~~~~~~~~~N~~~c~~ 518 (927)
+|+.|+|++|+|+ .+|.. +. ..+..+.+.+|++.|.+
T Consensus 79 ~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 79 QLTQLSLNDNQLK-SIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCEEECCCCccC-EeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999999999999 56654 33 26778889999998864
No 267
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.30 E-value=1.4e-12 Score=161.41 Aligned_cols=124 Identities=25% Similarity=0.253 Sum_probs=79.3
Q ss_pred hhHHHHHHHhhhhcc----CCCCC-CCCCCCCCCccEEEeCCCCCceEEEEecCCCCccc---CCccc------------
Q 002410 370 EWQDEALRSISDESE----RTNDR-GDPCVPVPWEWVTCSTTTPPRITKIALSGKNLKGE---IPPEL------------ 429 (927)
Q Consensus 370 ~~~~~al~~~~~~~~----~~~w~-gdpC~~~~w~~~~c~~~~~~~l~~L~L~~n~l~g~---ip~~l------------ 429 (927)
..+.+||.++|..+. ..+|. +.+| |.|.||+|+ ..+|+.|+|+++++.|. +|+.+
T Consensus 11 ~~~~~all~~k~~~~~~~~l~~W~~~~~~--C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 11 YREIHQLISFKDVLPDKNLLPDWSSNKNP--CTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp HHHHHHHHHHHTTCSCTTSSTTCCTTSCG--GGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECT
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCCCCC--cCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCcccccCCc
Confidence 345589999998764 57896 3444 379999998 36999999999999998 66544
Q ss_pred -----------cCCcccceecccCCCCCCCCC---CcCcccccceeecccccccCCCCCcC-CCccccccccccccCCCC
Q 002410 430 -----------KNMEALTELWLDGNFLTGPLP---DMSRLIDLRIVHLENNELTGSLPSYM-GSLPNLQELHIENNSFVG 494 (927)
Q Consensus 430 -----------~~l~~L~~L~Ls~N~l~g~~p---~~~~l~~L~~L~Ls~N~l~g~iP~~l-~~l~~L~~L~l~~N~l~g 494 (927)
++|++|++|+|++|.++|.+| .+++|++|++|+|++|+++|.+|..+ .++++|+.|+|++|++++
T Consensus 86 ~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 165 (768)
T 3rgz_A 86 NSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG 165 (768)
T ss_dssp TSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEE
T ss_pred CCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCC
Confidence 445555555555555555444 24555555555555555555555544 455555555555555554
Q ss_pred CCCc
Q 002410 495 EIPP 498 (927)
Q Consensus 495 ~iP~ 498 (927)
.+|.
T Consensus 166 ~~~~ 169 (768)
T 3rgz_A 166 ANVV 169 (768)
T ss_dssp ETHH
T ss_pred cCCh
Confidence 4443
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.30 E-value=5.3e-13 Score=147.97 Aligned_cols=140 Identities=21% Similarity=0.275 Sum_probs=113.8
Q ss_pred hhHHHHHHHhhhhcc--C----CCCC----CCCCCCCCCccEEEeC-------CCCCceEEEEecCCCCcccCCccccCC
Q 002410 370 EWQDEALRSISDESE--R----TNDR----GDPCVPVPWEWVTCST-------TTPPRITKIALSGKNLKGEIPPELKNM 432 (927)
Q Consensus 370 ~~~~~al~~~~~~~~--~----~~w~----gdpC~~~~w~~~~c~~-------~~~~~l~~L~L~~n~l~g~ip~~l~~l 432 (927)
..+..||.+|+.... . .+|. +.+. .|.|.|++|.. ....+|+.|+|++|+++ .+|+.+++|
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~-~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l 103 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQ-IETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRL 103 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTT-SCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGG
T ss_pred chHHHHHHHHHHhccCCchhhhhhhccccccccc-ccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhC
Confidence 345689999998653 2 3462 2221 23699988852 23578999999999999 999999999
Q ss_pred cccceecccCCCCCCCCC-CcCcccccceeecccccccCCCCCcCCCccccccccccccCCCCCCCcccc----------
Q 002410 433 EALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---------- 501 (927)
Q Consensus 433 ~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~---------- 501 (927)
++|++|+|++|+|+ .+| .++++++|++|+|++|+++ .+|..++++++|+.|+|++|++.|.+|..+.
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 99999999999999 566 5999999999999999999 8999999999999999999999999998773
Q ss_pred -CCceeeeecCCC
Q 002410 502 -TGKVIFKYDNNP 513 (927)
Q Consensus 502 -~~~~~~~~~~N~ 513 (927)
..+..+.+.+|.
T Consensus 182 l~~L~~L~L~~n~ 194 (328)
T 4fcg_A 182 LVNLQSLRLEWTG 194 (328)
T ss_dssp STTCCEEEEEEEC
T ss_pred CCCCCEEECcCCC
Confidence 355666666654
No 269
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.30 E-value=4e-12 Score=127.43 Aligned_cols=109 Identities=23% Similarity=0.376 Sum_probs=92.8
Q ss_pred EEeCCCCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcc
Q 002410 402 TCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLP 480 (927)
Q Consensus 402 ~c~~~~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~ 480 (927)
.|+|.. +.|++++|+|. .+|..+. ++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|..++
T Consensus 9 ~C~C~~----~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 81 (174)
T 2r9u_A 9 QCSCDQ----TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLT 81 (174)
T ss_dssp TSEECS----SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEECC----cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcc
Confidence 466643 68999999997 8998775 8999999999999999885 89999999999999999975556679999
Q ss_pred ccccccccccCCCCCCCccccC---CceeeeecCCCCCccc
Q 002410 481 NLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 518 (927)
Q Consensus 481 ~L~~L~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~ 518 (927)
+|+.|+|++|+|+ .+|...+. .+..+.+.+|++.|.+
T Consensus 82 ~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 82 QLTQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred hhhEEECCCCccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999999999999 66665332 6778889999999864
No 270
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.27 E-value=7e-12 Score=131.48 Aligned_cols=109 Identities=23% Similarity=0.227 Sum_probs=96.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|+|.+..+..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 46899999999999855556689999999999999999998886 799999999999999999 8999999999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCCccc
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 518 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~ 518 (927)
|++|+|+ .+|...+. .+..+.+.+||+.|.+
T Consensus 142 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 142 LDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999999 56654433 6778889999999865
No 271
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.26 E-value=5.5e-12 Score=125.89 Aligned_cols=102 Identities=23% Similarity=0.265 Sum_probs=89.4
Q ss_pred CCCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccc
Q 002410 396 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 466 (927)
Q Consensus 396 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N 466 (927)
|.|..+.|+.. .+..++.|+|++|+|++..|..|.+|++|+.|+|++|+|++.+|. |..+++|+.|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45666666542 246799999999999988899999999999999999999998886 799999999999999
Q ss_pred cccCCCCCcCCCccccccccccccCCCCCCC
Q 002410 467 ELTGSLPSYMGSLPNLQELHIENNSFVGEIP 497 (927)
Q Consensus 467 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP 497 (927)
+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997667789999999999999999986544
No 272
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.26 E-value=9.9e-12 Score=127.97 Aligned_cols=122 Identities=23% Similarity=0.339 Sum_probs=96.9
Q ss_pred CCCCCCCCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCccccccee
Q 002410 391 DPCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIV 461 (927)
Q Consensus 391 dpC~~~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L 461 (927)
+.| .|.|.++.|+.. .+++++.|+|++|++++..+..|.++++|+.|+|++|+|++.++. |..+++|++|
T Consensus 3 ~~C-~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 3 SRC-SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TTC-EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCC-EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 345 357888888653 245799999999999976666789999999999999999988776 7899999999
Q ss_pred ecccccccCCCCCcCCCccccccccccccCCCCCCCccc-c--CCceeeeecCCCC
Q 002410 462 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL-L--TGKVIFKYDNNPK 514 (927)
Q Consensus 462 ~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~-~--~~~~~~~~~~N~~ 514 (927)
+|++|++++..+..+..+++|+.|+|++|+++ .+|... . ..+..+.+.+|..
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCcc
Confidence 99999999666667889999999999999998 455543 2 2566677777754
No 273
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.25 E-value=8.3e-12 Score=130.05 Aligned_cols=120 Identities=23% Similarity=0.216 Sum_probs=100.0
Q ss_pred CCCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccc
Q 002410 396 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 466 (927)
Q Consensus 396 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N 466 (927)
|.|..+.|+.. .+++++.|+|++|+|++..+..|.++++|+.|+|++|+|++..|+ |.++++|+.|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666676542 245799999999999987777999999999999999999999885 999999999999999
Q ss_pred cccCCCCCcCCCccccccccccccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 467 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 467 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
+|++..+..|..+++|+.|+|++|++++..|..+.. .+..+.+.+|...
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 999555556789999999999999999665665543 6677888888644
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.24 E-value=1.2e-11 Score=134.47 Aligned_cols=110 Identities=27% Similarity=0.325 Sum_probs=98.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++++.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 99 l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (290)
T ss_dssp CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEE
Confidence 46899999999999977778899999999999999999998886 78999999999999999955555678999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCCccc
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHKE 518 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~~ 518 (927)
|++|+|+ .+|..++. .+..+.+.+||+.|.+
T Consensus 179 L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9999999 89998876 4667888999999975
No 275
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=6.8e-12 Score=139.85 Aligned_cols=104 Identities=18% Similarity=0.206 Sum_probs=91.0
Q ss_pred EEEecCC-CCcccCCccccCCcccceecccC-CCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccccc
Q 002410 413 KIALSGK-NLKGEIPPELKNMEALTELWLDG-NFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 489 (927)
Q Consensus 413 ~L~L~~n-~l~g~ip~~l~~l~~L~~L~Ls~-N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~ 489 (927)
.++++++ +|+ .||. |..+++|+.|+|++ |+|++.+|. |.+|++|+.|+|++|+|+|.+|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3577777 888 6888 99999999999996 999999985 99999999999999999998899999999999999999
Q ss_pred cCCCCCCCccccC--CceeeeecCCCCCcccc
Q 002410 490 NSFVGEIPPALLT--GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 490 N~l~g~iP~~~~~--~~~~~~~~~N~~~c~~~ 519 (927)
|+|+ .+|...+. .+..+.+.+|++.|.+.
T Consensus 90 N~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALE-SLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred Cccc-eeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999 67776655 36778889999998643
No 276
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.21 E-value=2.5e-11 Score=128.96 Aligned_cols=110 Identities=20% Similarity=0.214 Sum_probs=96.0
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..|..|+.+++|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 46899999999999977778889999999999999999998886 79999999999999999977777899999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCCcc
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 517 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~ 517 (927)
|++|++++..|..+.. .+..+.+.+|++.|.
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999544434432 677889999999885
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.21 E-value=2.5e-12 Score=141.56 Aligned_cols=108 Identities=26% Similarity=0.309 Sum_probs=99.5
Q ss_pred eEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccccc
Q 002410 411 ITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 490 (927)
Q Consensus 411 l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N 490 (927)
++.|+|++|++++.+|..|.++++|+.|+|++|++++.+|.+..+++|+.|+|++|+++|.+|..+..+++|+.|+|++|
T Consensus 199 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccc-cCCceeeeecCCCCCccc
Q 002410 491 SFVGEIPPAL-LTGKVIFKYDNNPKLHKE 518 (927)
Q Consensus 491 ~l~g~iP~~~-~~~~~~~~~~~N~~~c~~ 518 (927)
+++|.+|... +..+..+.+.+|+++|+.
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred cccccCCCCccccccChHHhcCCCCccCC
Confidence 9999999862 125667788999999964
No 278
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.21 E-value=1.5e-11 Score=128.17 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=100.6
Q ss_pred CCCccEEEeCCC--------CCceEEEEecCCCCcccCCc-cccCCcccceecccCCCCCCCCC-CcCcccccceeeccc
Q 002410 396 VPWEWVTCSTTT--------PPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 465 (927)
Q Consensus 396 ~~w~~~~c~~~~--------~~~l~~L~L~~n~l~g~ip~-~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~ 465 (927)
|.|..+.|+... +..++.|+|++|+|++..|. .|.++++|+.|+|++|+|++.+| .|.++++|+.|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 456666665421 34688999999999987664 58999999999999999999988 599999999999999
Q ss_pred ccccCCCCCcCCCccccccccccccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 466 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 466 N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
|+|++..|..|..+++|+.|+|++|+|++..|..+.. .+..+.+.+|...
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 142 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 142 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCC
Confidence 9999888888999999999999999999766766653 6677888888543
No 279
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.18 E-value=4.9e-11 Score=122.71 Aligned_cols=110 Identities=21% Similarity=0.274 Sum_probs=95.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. +..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 46899999999999966666789999999999999999988886 79999999999999999977777789999999999
Q ss_pred ccccCCCCCCCcccc---CCceeeeecCCCCCccc
Q 002410 487 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 518 (927)
Q Consensus 487 l~~N~l~g~iP~~~~---~~~~~~~~~~N~~~c~~ 518 (927)
|++|.++ .+|...+ ..+..+.+.+|++.|..
T Consensus 131 l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 131 LYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCCCccc-eeCHHHhccCCCccEEEecCCCeecCC
Confidence 9999999 5565433 26778889999988753
No 280
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.18 E-value=3.3e-11 Score=120.76 Aligned_cols=87 Identities=20% Similarity=0.311 Sum_probs=80.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+.+++.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 32 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 32 PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 46799999999999988899999999999999999999998886 79999999999999999966556699999999999
Q ss_pred ccccCCCC
Q 002410 487 IENNSFVG 494 (927)
Q Consensus 487 l~~N~l~g 494 (927)
|++|.+..
T Consensus 112 L~~N~~~c 119 (174)
T 2r9u_A 112 LYNNPWDC 119 (174)
T ss_dssp CCSSCBCT
T ss_pred eCCCCccc
Confidence 99999983
No 281
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.18 E-value=4.9e-11 Score=128.32 Aligned_cols=112 Identities=18% Similarity=0.162 Sum_probs=97.9
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.+|. +..+++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 46899999999999977777899999999999999999998886 79999999999999999987777889999999999
Q ss_pred ccccCCCCCCCcccc--CCceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALL--TGKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~--~~~~~~~~~~N~~~c~~~ 519 (927)
+++|++++..|..+. ..+..+.+.+|++.|..+
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999999965554443 367788999999987643
No 282
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.17 E-value=1.6e-11 Score=124.92 Aligned_cols=91 Identities=22% Similarity=0.341 Sum_probs=86.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++.+|..+..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 46899999999999999999999999999999999999999996 99999999999999999999999999999999999
Q ss_pred ccccCCCCCCCc
Q 002410 487 IENNSFVGEIPP 498 (927)
Q Consensus 487 l~~N~l~g~iP~ 498 (927)
|++|.+++..+.
T Consensus 133 L~~N~l~c~c~l 144 (192)
T 1w8a_A 133 LASNPFNCNCHL 144 (192)
T ss_dssp CTTCCBCCSGGG
T ss_pred eCCCCccCcCcc
Confidence 999999987764
No 283
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.16 E-value=4e-11 Score=128.84 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=83.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++.++.|+|++|++++..+..|.++++|++|+|++|+|+..++. |.++++|++|+|++|++++..+..+..+++|+.|+
T Consensus 36 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 36 PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 34688899999999866666888999999999999999877776 68899999999999999866666778889999999
Q ss_pred ccccCCCCCCCcccc--CCceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALL--TGKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~--~~~~~~~~~~N~~ 514 (927)
|++|.+++..|..+. ..+..+.+.+|..
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcC
Confidence 999998844333332 2566677777643
No 284
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.16 E-value=2e-11 Score=146.63 Aligned_cols=106 Identities=15% Similarity=0.058 Sum_probs=91.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
|..++.|||++|+|++..|..|.+|++|++|+|++|+|++.+|+ |.+|++|++|+|++|+|++..|..|.+|++|+.|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 45899999999999977778999999999999999999998885 99999999999999999966667899999999999
Q ss_pred ccccCCCCCCCcc-ccC--CceeeeecCCCC
Q 002410 487 IENNSFVGEIPPA-LLT--GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~-~~~--~~~~~~~~~N~~ 514 (927)
|++|+++ .+|.. +.. .+..+.+.+|..
T Consensus 131 Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 131 AVETNLA-SLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp CTTSCCC-CSTTCCCTTCTTCCEEECCSSCC
T ss_pred CCCCcCC-CCChhhhhcCcccCeeccccCcc
Confidence 9999999 56654 332 566777777754
No 285
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.16 E-value=3e-11 Score=145.22 Aligned_cols=113 Identities=16% Similarity=0.168 Sum_probs=100.9
Q ss_pred CCCceEEEEecCCCCc-ccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccc
Q 002410 407 TPPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 484 (927)
Q Consensus 407 ~~~~l~~L~L~~n~l~-g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~ 484 (927)
..+.++.|+|++|++. +.+|..|..|++|+.|+|++|+|++.+|. |.+|++|+.|+|++|+|++..|..|..+++|+.
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 3568999999999854 45788899999999999999999999996 999999999999999999888889999999999
Q ss_pred ccccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 485 LHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 485 L~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
|+|++|+|++..|..+.. .+..+.+.+||+.|.+.
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999877776643 57788999999999864
No 286
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.15 E-value=2.9e-11 Score=119.94 Aligned_cols=105 Identities=22% Similarity=0.267 Sum_probs=91.1
Q ss_pred CCceEEEEecCCCCc-ccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~-g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+++++.|+|++|+++ |.+|..+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 468999999999998 89999999999999999999999988 7799999999999999999988888888899999999
Q ss_pred ccccCCCCCCC--ccccC--CceeeeecCCCC
Q 002410 487 IENNSFVGEIP--PALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP--~~~~~--~~~~~~~~~N~~ 514 (927)
|++|.++ .+| ..+.. .+..+.+.+|+.
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSGG
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCcC
Confidence 9999998 554 34433 566677777754
No 287
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.14 E-value=7.8e-11 Score=126.50 Aligned_cols=111 Identities=22% Similarity=0.282 Sum_probs=98.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 108 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 108 LVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 36899999999999988888899999999999999999998886 89999999999999999977777899999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
|++|+++ .+|...+. .+..+.+.+||+.|.+.
T Consensus 188 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 188 LDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCCCcCC-cCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9999999 56665433 67788999999998753
No 288
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.13 E-value=2.3e-11 Score=118.12 Aligned_cols=106 Identities=20% Similarity=0.242 Sum_probs=89.5
Q ss_pred CCceEEEEecCCCCc-ccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~-g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+++++.|+|++|+++ |.+|..+..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++.+|..++.+++|+.|+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 357999999999998 89999999999999999999999988 7799999999999999999988888888899999999
Q ss_pred ccccCCCCC-CCccccC--CceeeeecCCCC
Q 002410 487 IENNSFVGE-IPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~-iP~~~~~--~~~~~~~~~N~~ 514 (927)
+++|.+++. .|..+.. .+..+.+.+|+.
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 999999842 2244433 566777777754
No 289
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.12 E-value=5.2e-11 Score=131.89 Aligned_cols=108 Identities=16% Similarity=0.236 Sum_probs=93.1
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|+++ .+|..++++++|+.|+|++|++++.++.+..+++|+.|+|++|++.+.+|..++.+++|+.|+|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 467899999999998 8898899999999999999999987778899999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccC--CceeeeecCCCCCc
Q 002410 488 ENNSFVGEIPPALLT--GKVIFKYDNNPKLH 516 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c 516 (927)
++|++.+.+|..+.. .+..+.+.+|+...
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 999988899987654 56777888877543
No 290
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.12 E-value=1e-10 Score=124.26 Aligned_cols=106 Identities=23% Similarity=0.289 Sum_probs=89.0
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++.++.|+|++|++++..|..|.++++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 34 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 34 PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 45789999999999988888899999999999999999998886 88999999999999999977777888999999999
Q ss_pred ccccCCCCCCCcccc---CCceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALL---TGKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~---~~~~~~~~~~N~~ 514 (927)
|++|+|+ .+|...+ ..+..+.+.+|..
T Consensus 114 L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 114 LGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCcCC-CcChhHhccCCcccEEECcCCcC
Confidence 9999998 5665543 3566677777743
No 291
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.12 E-value=3.1e-10 Score=113.53 Aligned_cols=141 Identities=14% Similarity=0.187 Sum_probs=95.1
Q ss_pred eEEEecCCCCCccCCCCCeEEecCCccccCCceeeecCC------C-CCcccccccccccCCCccceeeecccCCceeEE
Q 002410 25 FISIDCGSTSNYTDPSTGLAWISDIGIMNNGKSVKVENP------S-GNWMQYRTRRDLPIDNKKYCYNLITKERRRYLV 97 (927)
Q Consensus 25 ~~~idcg~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~------~-~~~~~~~tlr~fp~~~~~~cy~l~~~~~~~ylv 97 (927)
-+.||||+.. .+| ..+.+|.+|..|...|........ . ...+.+.|-|.|| .+.+|.+|+.++++|+|
T Consensus 7 ~~~INcGg~~-~~d-~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~---~~~tY~f~v~~~G~Y~V 81 (174)
T 2jwp_A 7 IWAVNAGGES-HVD-VHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNE---DSFGYDIPIKEEGEYVL 81 (174)
T ss_dssp EEEEEETSSS-EEE-TTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCC---SCEEEEEECCSCEEEEE
T ss_pred EEEEECCCCC-ccC-CCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCC---CCeEEEEEeCCCeEEEE
Confidence 3679999765 455 578999999988644532211110 0 1134678999998 37899999999999999
Q ss_pred EEEeeecCCCCCCCCCeEEEEEcCcee-EEEEec---CCccceEEEEEEe-------------cCCCCcccceecccCCC
Q 002410 98 RATFQYGSLGSEASYPKFQLYLDATLW-STVTVL---DASRVYAKEMIIR-------------APSDSIDVCICCAVTGS 160 (927)
Q Consensus 98 r~~~~yg~yd~~~~~p~fd~~~~~~~w-~~v~~~---~~~~~~~~e~~~~-------------~~~~~~~vcl~~~~~~~ 160 (927)
|.-|.--.|.+ .....||++++|..- .-.++. .....+..+..+. .....+.|.|.....+.
T Consensus 82 rLhF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~ 160 (174)
T 2jwp_A 82 VLKFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDN 160 (174)
T ss_dssp EEEEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCS
T ss_pred EEEEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCC
Confidence 99997666653 566799999999542 222221 1223444554443 24456777777544568
Q ss_pred ceeeeeeeeec
Q 002410 161 PFISTLELRPL 171 (927)
Q Consensus 161 pfis~le~~~l 171 (927)
|||++||+.+-
T Consensus 161 a~inaIEI~~~ 171 (174)
T 2jwp_A 161 PKVCALFIMKG 171 (174)
T ss_dssp SSEEEEEEESS
T ss_pred cEEEEEEEEeC
Confidence 99999999874
No 292
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.11 E-value=4.6e-11 Score=141.51 Aligned_cols=117 Identities=18% Similarity=0.215 Sum_probs=100.6
Q ss_pred CCCccEEEeCCC----------CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecc
Q 002410 396 VPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLE 464 (927)
Q Consensus 396 ~~w~~~~c~~~~----------~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls 464 (927)
|+|.++ |+|.. +++++.|+|++|++++..|..|.++++|++|+|++|++++.+|+ |.++++|++|+|+
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 578888 88752 35899999999999988899999999999999999999999885 9999999999999
Q ss_pred cccccCCCCCcCCCccccccccccccCCCC-CCCccccC--CceeeeecCCC
Q 002410 465 NNELTGSLPSYMGSLPNLQELHIENNSFVG-EIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 465 ~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g-~iP~~~~~--~~~~~~~~~N~ 513 (927)
+|++++..|..++++++|+.|+|++|.+++ .+|..+.. .+..+.+.+|.
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 999998777779999999999999999985 35555533 56677777775
No 293
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.11 E-value=1.3e-10 Score=124.02 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=110.6
Q ss_pred HhhcccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCceeeeeeeeecCceEEEEEEecCC
Q 002410 607 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHN 685 (927)
Q Consensus 607 ~~~~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~~~~~~LV~E~~~~ 685 (927)
+.+...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..++||||++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 445667888888999999865 7899999987532233346889999999995 67788899999888899999999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 002410 686 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------ 723 (927)
Q Consensus 686 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~------------------------------------------ 723 (927)
.+|.+.+.. ......++.+++++|+.||+.
T Consensus 95 ~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 95 VLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp EEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred eehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999876421 122357889999999999971
Q ss_pred --------------CCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 724 --------------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 724 --------------~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
....++|||++|.||+++++..+.|+||+.+..
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999997653
No 294
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.08 E-value=5.2e-11 Score=137.57 Aligned_cols=125 Identities=15% Similarity=0.157 Sum_probs=99.9
Q ss_pred CCCCC-CCCccEEEeCCC---------CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC--CcCccccc
Q 002410 391 DPCVP-VPWEWVTCSTTT---------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDL 458 (927)
Q Consensus 391 dpC~~-~~w~~~~c~~~~---------~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~l~~L 458 (927)
|||.. |.|.+..+.|.. +++++.|+|++|++++..|..|++|++|++|+|++|.+.+.+| .|.++++|
T Consensus 2 ~p~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L 81 (455)
T 3v47_A 2 DPGTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSL 81 (455)
T ss_dssp -----CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTC
T ss_pred CCccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccC
Confidence 45543 455664444431 4679999999999999889999999999999999999997765 39999999
Q ss_pred ceeecccccccCCCCCcCCCccccccccccccCCCCCCCcc--cc--CCceeeeecCCCCC
Q 002410 459 RIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPA--LL--TGKVIFKYDNNPKL 515 (927)
Q Consensus 459 ~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~--~~--~~~~~~~~~~N~~~ 515 (927)
++|+|++|++++.+|..|+++++|+.|+|++|.+++.+|.. +. ..+..+.+.+|...
T Consensus 82 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~ 142 (455)
T 3v47_A 82 IILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK 142 (455)
T ss_dssp CEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCC
T ss_pred CEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccC
Confidence 99999999999888999999999999999999999766654 33 25667777777543
No 295
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.08 E-value=1.2e-10 Score=130.79 Aligned_cols=120 Identities=21% Similarity=0.158 Sum_probs=94.1
Q ss_pred CCCccEEEeCC--------CCCceEEEEecCCCCcccCCcccc-CCcccceecccCCCCCCCCCC-cCcccccceeeccc
Q 002410 396 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLEN 465 (927)
Q Consensus 396 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~-~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~ 465 (927)
|.+..+.|+.. .+..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|. |.++++|+.|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 34555666542 144688999999999977777777 899999999999999998885 89999999999999
Q ss_pred ccccCCCCCcCCCccccccccccccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 466 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 466 N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
|+|++..+..|..+++|+.|+|++|+|++..|..+.. .+..+.+.+|...
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 9999766778889999999999999998554555443 5666777777543
No 296
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.07 E-value=1.1e-10 Score=134.67 Aligned_cols=111 Identities=20% Similarity=0.244 Sum_probs=99.1
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|. +.++++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 46899999999999998899999999999999999999998885 89999999999999999988899999999999999
Q ss_pred ccccCCCCCCCcccc---CCceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~---~~~~~~~~~~N~~~c~~~ 519 (927)
|++|+++ .+|...+ ..+..+.+.+|+..|.++
T Consensus 378 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 378 LDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999 5666543 367788999999998654
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.06 E-value=1e-10 Score=126.39 Aligned_cols=111 Identities=19% Similarity=0.275 Sum_probs=97.3
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..+..|.++++|+.|+|++|++++.++. +..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 128 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 46899999999999977777799999999999999999988885 99999999999999999988899999999999999
Q ss_pred ccccCCCCCCCcc-cc--CCceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPA-LL--TGKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~-~~--~~~~~~~~~~N~~~c~~~ 519 (927)
|++|.+++ +|.. +. ..+..+.+.+|++.|.+.
T Consensus 208 l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 208 LFANNLSA-LPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CCSSCCSC-CCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCcCCc-CCHHHcccCcccCEEeccCCCccCCCC
Confidence 99999995 5543 43 267788999999988643
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.06 E-value=1.3e-10 Score=127.04 Aligned_cols=112 Identities=16% Similarity=0.169 Sum_probs=100.2
Q ss_pred CCceEEEEecCCCCcc-cCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g-~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
.++++.|+|++|.+++ .+|..+.++++|+.|+|++|++++.+|. +..+++|+.|+|++|++++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 4689999999999997 6899999999999999999999999885 8999999999999999997777789999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 486 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
+|++|++++.+|..+.. .+..+.+.+|++.|.+.
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 99999999888877654 56788899999988643
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.06 E-value=1.3e-10 Score=129.91 Aligned_cols=117 Identities=21% Similarity=0.249 Sum_probs=98.3
Q ss_pred CCCCccEEEeCCC----------CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeec
Q 002410 395 PVPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHL 463 (927)
Q Consensus 395 ~~~w~~~~c~~~~----------~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~L 463 (927)
.|+|.++ |+|+. +++++.|+|++|++++..+..|.++++|+.|+|++|++++.+|. |.++++|++|+|
T Consensus 29 ~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 4578887 88752 35899999999999976667899999999999999999998885 999999999999
Q ss_pred ccccccCCCCCcCCCccccccccccccCCCCCCCc-ccc---CCceeeeecCCC
Q 002410 464 ENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPP-ALL---TGKVIFKYDNNP 513 (927)
Q Consensus 464 s~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~-~~~---~~~~~~~~~~N~ 513 (927)
++|++++..+..++++++|+.|+|++|+++ .+|. ..+ ..+..+.+.+|.
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCc
Confidence 999999544445899999999999999999 6776 333 256677777774
No 300
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.06 E-value=1.6e-10 Score=128.67 Aligned_cols=103 Identities=20% Similarity=0.234 Sum_probs=86.3
Q ss_pred CCCCCCCccEEEeCC-C---------CCceEEEEecC-CCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccc
Q 002410 392 PCVPVPWEWVTCSTT-T---------PPRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLR 459 (927)
Q Consensus 392 pC~~~~w~~~~c~~~-~---------~~~l~~L~L~~-n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~ 459 (927)
.|..|.|..+.|+.. . ..+|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++.+|. |.+|++|+
T Consensus 4 ~c~~C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 83 (347)
T 2ifg_A 4 ACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (347)
T ss_dssp SSCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred cCccccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCC
Confidence 353457777877654 1 24599999996 999988888999999999999999999999996 89999999
Q ss_pred eeecccccccCCCCCcCCCccccccccccccCCCCC
Q 002410 460 IVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGE 495 (927)
Q Consensus 460 ~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ 495 (927)
.|+|++|+|++..|..+..++ |+.|+|.+|.|...
T Consensus 84 ~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 84 RLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp EEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred EEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999999999965555666665 99999999999843
No 301
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.04 E-value=2.1e-10 Score=123.40 Aligned_cols=107 Identities=15% Similarity=0.030 Sum_probs=91.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++.++.|+|++|++++..+..|.++++|+.|+|++|++++..+. |.++++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 45699999999999987777999999999999999999998884 99999999999999999988888999999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~ 514 (927)
+++|.+++..+..+.. .+..+.+.+|..
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 136 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLI 136 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCcc
Confidence 9999999544434432 566777777754
No 302
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.04 E-value=1.9e-10 Score=132.62 Aligned_cols=109 Identities=24% Similarity=0.332 Sum_probs=97.8
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..|. |.++++|+.|+|++|++++..|..|.++++|+.|+
T Consensus 184 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 261 (440)
T 3zyj_A 184 LSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEIN 261 (440)
T ss_dssp CSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEE
T ss_pred ccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEE
Confidence 468999999999999 676 589999999999999999999885 99999999999999999998899999999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
|++|+|+ .+|...+. .+..+.+.+||+.|.+.
T Consensus 262 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 262 LAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999999 66665543 67788999999999764
No 303
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.02 E-value=4.5e-10 Score=122.09 Aligned_cols=107 Identities=28% Similarity=0.350 Sum_probs=95.2
Q ss_pred CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccc
Q 002410 407 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 407 ~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
..++++.|+|++|+|+ .+|..+.++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 3568999999999999 8999999999999999999999999886 9999999999999999997777788999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCC
Q 002410 486 HIENNSFVGEIPPALLT---GKVIFKYDNNPKL 515 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~ 515 (927)
+|++|+|+ .+|...+. .+..+.+.+|...
T Consensus 154 ~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 154 SLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp ECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 99999999 78876643 5677788888654
No 304
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.02 E-value=1.6e-10 Score=121.57 Aligned_cols=125 Identities=20% Similarity=0.265 Sum_probs=100.4
Q ss_pred CCCCCCCCCCCccEEEeCC-------CCCceEEEEecCCCCcccCCccccCCcccceecccCCC-CCCCCC-CcCccccc
Q 002410 388 DRGDPCVPVPWEWVTCSTT-------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPLP-DMSRLIDL 458 (927)
Q Consensus 388 w~gdpC~~~~w~~~~c~~~-------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~-l~g~~p-~~~~l~~L 458 (927)
|..++|.+..|.++.++|. .+..++.|+|++|++++..+..|.++++|+.|+|++|+ +++..+ .|.++++|
T Consensus 3 ~cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L 82 (239)
T 2xwt_C 3 CSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKV 82 (239)
T ss_dssp CCSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTC
T ss_pred CCCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCC
Confidence 3345676544566665553 24589999999999997777789999999999999997 888877 49999999
Q ss_pred ceeeccc-ccccCCCCCcCCCccccccccccccCCCCCCCccccC--Cce---eeeecCCCC
Q 002410 459 RIVHLEN-NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKV---IFKYDNNPK 514 (927)
Q Consensus 459 ~~L~Ls~-N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~---~~~~~~N~~ 514 (927)
+.|+|++ |++++..|..|.++++|+.|++++|.+++ +|. +.. .+. .+.+.+|+.
T Consensus 83 ~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~ 142 (239)
T 2xwt_C 83 THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPY 142 (239)
T ss_dssp CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTT
T ss_pred cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcc
Confidence 9999999 99996666789999999999999999994 886 322 333 677788843
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.02 E-value=1.5e-10 Score=138.90 Aligned_cols=111 Identities=19% Similarity=0.144 Sum_probs=99.9
Q ss_pred CCceEEEEecCCCCcc-cCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g-~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
.++++.|+|++|++++ .+|..++++++|+.|+|++|++++.+|. +.++++|+.|+|++|++++.+|..++++++|+.|
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 4689999999999998 4788999999999999999999999886 8999999999999999999889999999999999
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 486 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
+|++|+++ .+|..+.. .+..+.+.+||+.|.+.
T Consensus 527 ~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 527 DCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp ECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999 89987544 36788999999998754
No 306
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.01 E-value=5.4e-10 Score=120.10 Aligned_cols=108 Identities=21% Similarity=0.215 Sum_probs=89.9
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..+..+.++++|+.|+|++|++++.+|. +..+++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 46899999999999977777789999999999999999988886 79999999999999999977777789999999999
Q ss_pred ccccCCCCCCCcccc--CCceeeeecCCCCC
Q 002410 487 IENNSFVGEIPPALL--TGKVIFKYDNNPKL 515 (927)
Q Consensus 487 l~~N~l~g~iP~~~~--~~~~~~~~~~N~~~ 515 (927)
+++|++++..|..+. ..+..+.+.+|...
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 999999954443333 36677777777643
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.01 E-value=3.3e-10 Score=131.04 Aligned_cols=106 Identities=21% Similarity=0.220 Sum_probs=92.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+++++.|+|++|++++..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 45899999999999998999999999999999999999999885 99999999999999999977777799999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~ 514 (927)
|++|.++ .+|...+. .+..+.+.+|..
T Consensus 154 L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~ 183 (452)
T 3zyi_A 154 LRNNPIE-SIPSYAFNRVPSLMRLDLGELKK 183 (452)
T ss_dssp CCSCCCC-EECTTTTTTCTTCCEEECCCCTT
T ss_pred CCCCCcc-eeCHhHHhcCCcccEEeCCCCCC
Confidence 9999999 67765443 555666666543
No 308
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.00 E-value=3.2e-10 Score=127.22 Aligned_cols=108 Identities=22% Similarity=0.290 Sum_probs=51.6
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCc-C---CCccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSY-M---GSLPNLQ 483 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~-l---~~l~~L~ 483 (927)
++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++..|. |..+++|+.|+|++|+|++ +|.. + ..+++|+
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLM 166 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCC
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCC
Confidence 3455555555555544444455555555555555555554442 5555555555555555552 3332 2 3455555
Q ss_pred cccccccCCCCCCCccccCC-----ceeeeecCCCCCccc
Q 002410 484 ELHIENNSFVGEIPPALLTG-----KVIFKYDNNPKLHKE 518 (927)
Q Consensus 484 ~L~l~~N~l~g~iP~~~~~~-----~~~~~~~~N~~~c~~ 518 (927)
.|+|++|+|+ .+|...+.. +..+.+.+||+.|.+
T Consensus 167 ~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 167 LLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp EEECCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred EEECCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 5555555555 344322111 123556666666653
No 309
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.00 E-value=3.7e-10 Score=113.02 Aligned_cols=90 Identities=22% Similarity=0.338 Sum_probs=81.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|+|++..+..+.++++|+.|+|++|+|++.++. +..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEE
Confidence 46899999999999976667789999999999999999998886 79999999999999999966566678999999999
Q ss_pred ccccCCCCCCC
Q 002410 487 IENNSFVGEIP 497 (927)
Q Consensus 487 l~~N~l~g~iP 497 (927)
|++|.+.+..|
T Consensus 131 l~~N~~~~~~~ 141 (177)
T 2o6r_A 131 LHTNPWDCSCP 141 (177)
T ss_dssp CCSSCBCCCHH
T ss_pred ecCCCeeccCc
Confidence 99999998776
No 310
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=5.6e-10 Score=118.36 Aligned_cols=131 Identities=17% Similarity=0.088 Sum_probs=99.2
Q ss_pred ccc-ccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCc--eeeeeeeeecCceEEEEEEecCCCCH
Q 002410 612 KIG-KGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEEHQRILVYEYMHNGTL 688 (927)
Q Consensus 612 ~LG-~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hpn--Iv~l~~~~~~~~~~~LV~E~~~~gsL 688 (927)
.++ .|..+.||++...+|+.+++|+.... ....+.+|+++++.+++.+ +.+++++...++..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55569999998877888999997653 2345778999999996544 45688888887889999999999888
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 002410 689 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------------- 724 (927)
Q Consensus 689 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~-------------------------------------------- 724 (927)
. ... . ....++.++++.|+.||+..
T Consensus 103 ~--~~~------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 103 L--SSH------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp T--TSC------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred C--cCc------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 3 221 1 12367788888888888621
Q ss_pred -----------CCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 725 -----------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 725 -----------~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
...++|||++|.||++++++.+.|+||+.+..
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12299999999999998776677999998754
No 311
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.99 E-value=4.6e-10 Score=135.69 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=99.0
Q ss_pred CCceEEEEecCCCCcccCCcccc--CCcccceecccCCCCCCCCCCcCcccccceeec------ccccccCCCCCcCCCc
Q 002410 408 PPRITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHL------ENNELTGSLPSYMGSL 479 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~--~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~L------s~N~l~g~iP~~l~~l 479 (927)
.++++.|+|++|+|+ .+|..+. ++++|+.|+|++|+|++.++.+.++++|+.|+| ++|++.+.+|..++++
T Consensus 487 l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l 565 (636)
T 4eco_A 487 TYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLC 565 (636)
T ss_dssp GGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGC
T ss_pred cCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcC
Confidence 348999999999999 8999998 999999999999999994446999999999999 5688999999999999
Q ss_pred cccccccccccCCCCCCCccccCCceeeeecCCCCCcc
Q 002410 480 PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 517 (927)
Q Consensus 480 ~~L~~L~l~~N~l~g~iP~~~~~~~~~~~~~~N~~~c~ 517 (927)
++|+.|+|++|++ +.||..+...+..+.+++|+..|-
T Consensus 566 ~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 566 PSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp SSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEE
T ss_pred CCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCccc
Confidence 9999999999999 699999888889999999998873
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.99 E-value=3e-10 Score=131.47 Aligned_cols=109 Identities=23% Similarity=0.306 Sum_probs=97.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++ +| .+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 195 l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 272 (452)
T 3zyi_A 195 LFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272 (452)
T ss_dssp CTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEE
Confidence 4689999999999995 55 689999999999999999999885 99999999999999999998899999999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
|++|+|+ .+|...+. .+..+.+.+||+.|.+.
T Consensus 273 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 273 LAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCSSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCCCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999 66665543 67788999999999764
No 313
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.98 E-value=3.9e-10 Score=134.08 Aligned_cols=100 Identities=25% Similarity=0.324 Sum_probs=60.5
Q ss_pred eEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccccc
Q 002410 411 ITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 490 (927)
Q Consensus 411 l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~N 490 (927)
++.|+|++|+|++ +|. |++|++|+.|+|++|+|+..++.+++|++|+.|+|++|+|++ +| .++.|++|+.|+|++|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 5566666666664 554 666666666666666666332346666666666666666664 55 5666666666666666
Q ss_pred CCCCCC-CccccC--CceeeeecCCCC
Q 002410 491 SFVGEI-PPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 491 ~l~g~i-P~~~~~--~~~~~~~~~N~~ 514 (927)
+|++.+ |..+.. .+..+.+.+|+.
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 666444 555433 455555666553
No 314
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.97 E-value=5e-10 Score=137.21 Aligned_cols=105 Identities=27% Similarity=0.360 Sum_probs=84.9
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
...|+.|+|++|++. .+|..+++|++|+.|+|++|+|+..++.|++|++|+.|+|++|+|+ .||..|++|++|+.|+|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 457888888888888 7888888888888888888888843335888888888888888888 78888888888888888
Q ss_pred cccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 488 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
++|.|+ .||..+.. .+..+.+.+|+..
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 888887 88887654 5667777888754
No 315
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.97 E-value=5.5e-10 Score=133.93 Aligned_cols=107 Identities=18% Similarity=0.068 Sum_probs=85.8
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+++++.|+|++|++++..|..|.++++|++|+|++|++++.+|. |.++++|++|+|++|++++..|..|+++++|+.|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 46788999999999987888889999999999999999888775 88899999999999998877788888888888888
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~ 514 (927)
|++|.+++..|..+.. .+..+.+.+|..
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 140 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFI 140 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcc
Confidence 8888888444344433 555666666653
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.97 E-value=9.6e-10 Score=118.77 Aligned_cols=107 Identities=21% Similarity=0.290 Sum_probs=89.7
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeeccccc-ccCCCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNE-LTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~-l~g~iP~~l~~l~~L~~L 485 (927)
+++++.|+|++|++++..+..|.++++|+.|+|++|++++..|. |..+++|+.|+|++|+ +++..|..+..+++|+.|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 56899999999999987778899999999999999999998774 8999999999999997 776668889999999999
Q ss_pred cccccCCCCCCCccccC--CceeeeecCCCC
Q 002410 486 HIENNSFVGEIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~ 514 (927)
++++|.+++..|..+.. .+..+.+.+|..
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 141 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcc
Confidence 99999999655555433 566777777754
No 317
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.96 E-value=5.4e-10 Score=113.80 Aligned_cols=88 Identities=25% Similarity=0.283 Sum_probs=80.9
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|+|++..+..|.+|++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 36899999999999988888899999999999999999999995 99999999999999999966666799999999999
Q ss_pred ccccCCCCC
Q 002410 487 IENNSFVGE 495 (927)
Q Consensus 487 l~~N~l~g~ 495 (927)
|++|.+...
T Consensus 133 L~~N~~~C~ 141 (193)
T 2wfh_A 133 IGANPLYCD 141 (193)
T ss_dssp CCSSCEECS
T ss_pred eCCCCeecC
Confidence 999999754
No 318
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.96 E-value=7.7e-10 Score=128.71 Aligned_cols=117 Identities=22% Similarity=0.258 Sum_probs=98.3
Q ss_pred CccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccc
Q 002410 398 WEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNEL 468 (927)
Q Consensus 398 w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l 468 (927)
|..+.|+.. .+.+++.|+|++|++++..|..|.++++|+.|+|++|++++..|. |.+|++|+.|+|++|++
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 455666543 246899999999999988889999999999999999999999885 99999999999999999
Q ss_pred cCCCCCcCCCccccccccccccCCCCCCCccccC--CceeeeecCCCC
Q 002410 469 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 469 ~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~ 514 (927)
++..+..|.++++|+.|+|++|.+++..|..+.. .+..+.+.+|..
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l 140 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTC
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcc
Confidence 9655567899999999999999999666665543 566777777754
No 319
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.95 E-value=7.6e-10 Score=137.30 Aligned_cols=106 Identities=17% Similarity=0.269 Sum_probs=95.9
Q ss_pred CceEEEEecCCCCcccCCcccc--CCcccceecccCCCCCCCCCCcCcccccceeeccc------ccccCCCCCcCCCcc
Q 002410 409 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN------NELTGSLPSYMGSLP 480 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~--~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~------N~l~g~iP~~l~~l~ 480 (927)
++|+.|+|++|+|+ .+|..+. ++++|+.|+|++|+|++.++.+.+|++|+.|+|++ |++.+.+|..|++|+
T Consensus 728 ~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~ 806 (876)
T 4ecn_A 728 YLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCP 806 (876)
T ss_dssp GGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCS
T ss_pred CCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCC
Confidence 38999999999999 8999997 99999999999999999544699999999999976 889999999999999
Q ss_pred ccccccccccCCCCCCCccccCCceeeeecCCCCCc
Q 002410 481 NLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLH 516 (927)
Q Consensus 481 ~L~~L~l~~N~l~g~iP~~~~~~~~~~~~~~N~~~c 516 (927)
+|+.|+|++|+| +.||..+...+..+.+++|+...
T Consensus 807 ~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 807 SLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp SCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 999999999999 69999988888889999998764
No 320
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.94 E-value=6.1e-10 Score=133.55 Aligned_cols=107 Identities=15% Similarity=-0.011 Sum_probs=92.7
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+..++.|+|++|++++..|..|+++++|++|+|++|++++..|. |.++++|++|+|++|++++..|..|+++++|+.|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 56899999999999988899999999999999999999998885 99999999999999999988899999999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~ 514 (927)
+++|.+++..|..+.. .+..+.+.+|..
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l 141 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHI 141 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcc
Confidence 9999999533444432 566677777654
No 321
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.94 E-value=5.5e-10 Score=132.79 Aligned_cols=88 Identities=28% Similarity=0.334 Sum_probs=82.7
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCC-CCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~i-P~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +|.+++|++|+.|+|++|+|++.+ |..|+.|++|+.|+
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 468999999999999 999999999999999999999999 569999999999999999999887 99999999999999
Q ss_pred ccccCCCCCCC
Q 002410 487 IENNSFVGEIP 497 (927)
Q Consensus 487 l~~N~l~g~iP 497 (927)
|++|.|++.+|
T Consensus 540 L~~N~l~~~~~ 550 (567)
T 1dce_A 540 LQGNSLCQEEG 550 (567)
T ss_dssp CTTSGGGGSSS
T ss_pred ecCCcCCCCcc
Confidence 99999996544
No 322
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.94 E-value=1.1e-09 Score=126.27 Aligned_cols=106 Identities=19% Similarity=0.189 Sum_probs=91.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++.++.|+|++|++++..+..|.+|++|+.|+|++|+|++..+. |.++++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 45789999999999988889999999999999999999998875 99999999999999999966666899999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~ 514 (927)
|++|.++ .+|...+. .+..+.+.+|..
T Consensus 143 L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~ 172 (440)
T 3zyj_A 143 LRNNPIE-SIPSYAFNRIPSLRRLDLGELKR 172 (440)
T ss_dssp CCSCCCC-EECTTTTTTCTTCCEEECCCCTT
T ss_pred CCCCccc-ccCHHHhhhCcccCEeCCCCCCC
Confidence 9999999 66654433 556666766543
No 323
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.93 E-value=1.3e-09 Score=130.87 Aligned_cols=104 Identities=14% Similarity=0.186 Sum_probs=59.0
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccccc
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 488 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~ 488 (927)
+|+.|+|++|++++..|..|+++++|+.|+|++|.|++.+|. |+++++|+.|+|++|+|++..|..|+++++|+.|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 455666666666655555666666666666666666665554 5666666666666666663333344566666666666
Q ss_pred ccCCCCCCCccccC--CceeeeecCCC
Q 002410 489 NNSFVGEIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 489 ~N~l~g~iP~~~~~--~~~~~~~~~N~ 513 (927)
+|.+++..|..+.. .+..+.+.+|.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNR 182 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSC
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCC
Confidence 66666444443332 34445555553
No 324
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.93 E-value=6.9e-10 Score=113.19 Aligned_cols=104 Identities=14% Similarity=0.193 Sum_probs=84.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++++.|+|++|++++..|..+++|++|+.|+|++|++++..|. +..+++|+.|+|++|++.+.+| .+..+++|+.|+
T Consensus 87 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 87 LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred CCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 46799999999999988888999999999999999999987664 8899999999999998444777 688899999999
Q ss_pred ccccCCCCCCC-ccccCCceeeeecCCC
Q 002410 487 IENNSFVGEIP-PALLTGKVIFKYDNNP 513 (927)
Q Consensus 487 l~~N~l~g~iP-~~~~~~~~~~~~~~N~ 513 (927)
+++|.+++ +| -.-...+..+.+.+|+
T Consensus 166 l~~n~i~~-~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 166 IQFDGVHD-YRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CTTBCCCC-CTTGGGCSSCCEEEECBC-
T ss_pred CCCCCCcC-hHHhccCCCCCEEEeeCcc
Confidence 99999984 54 2223366777777776
No 325
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.91 E-value=8e-10 Score=110.54 Aligned_cols=104 Identities=22% Similarity=0.242 Sum_probs=84.7
Q ss_pred CCceEEEEecCCCCcccCCccccCCc-ccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+.+++.|+|++|+++ .+|. +..+. +|+.|+|++|+|++. +.+..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 357999999999999 5654 66665 999999999999987 7899999999999999999954334458999999999
Q ss_pred ccccCCCCCCCc--cccC--CceeeeecCCCCC
Q 002410 487 IENNSFVGEIPP--ALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 487 l~~N~l~g~iP~--~~~~--~~~~~~~~~N~~~ 515 (927)
|++|.++ .+|. .+.. .+..+.+.+|+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 9999996 7886 4433 5677788888754
No 326
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.91 E-value=1.4e-09 Score=120.00 Aligned_cols=106 Identities=23% Similarity=0.283 Sum_probs=94.1
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC-CcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
++++.|+|++|++++..|..|.++++|+.|+|++|++++.++ .+..+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 589999999999999889999999999999999999999888 4999999999999999999 89999999999999999
Q ss_pred cccCCCCCCCccccC---------CceeeeecCCCCCc
Q 002410 488 ENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 516 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~---------~~~~~~~~~N~~~c 516 (927)
++|+++ .+|...+. ....+.+.+||..+
T Consensus 271 ~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 271 HNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 999999 56655442 33456788888754
No 327
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.91 E-value=8.5e-10 Score=131.05 Aligned_cols=112 Identities=19% Similarity=0.207 Sum_probs=97.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCC-CCCCC-cCcccccceeecccccccCCCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT-GPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~-g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
.++++.|+|++|.+.+.+|..+.++++|+.|+|++|+++ +.+|. +..+++|+.|+|++|++++.+|..++.+++|+.|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 468999999999999999999999999999999999998 56774 8999999999999999998889999999999999
Q ss_pred cccccCCCCCCCccccC--CceeeeecCCCCCcccc
Q 002410 486 HIENNSFVGEIPPALLT--GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~~~ 519 (927)
++++|++++..|..+.. .+..+.+.+|++.|.+.
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 99999999655554433 67788899999988643
No 328
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.90 E-value=7e-10 Score=129.67 Aligned_cols=107 Identities=21% Similarity=0.188 Sum_probs=91.1
Q ss_pred CCceEEEEecCCCCcccCCcccc-CCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|.+++.+|..+. +|++|+.|+|++|.|++. |.+..+++|+.|+|++|+|++ +|..+..+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 35899999999999998888886 799999999999999887 445569999999999999995 555689999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCCcc
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 517 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~ 517 (927)
|++|.|+ .+|..+.. .+..+.+.+|+..|.
T Consensus 221 Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCBCHH
T ss_pred ecCCcCc-ccchhhccCCCCCEEEcCCCCCcCc
Confidence 9999999 58877644 667888999999875
No 329
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.90 E-value=5.7e-10 Score=126.29 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=96.8
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++++.|+|++|.+++..|..|.++++|+.|+|++|++++..+.+..+++|+.|+|++|+++ .+|..+..+++|+.|+|
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L 325 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEEC
Confidence 46899999999999998899999999999999999999987667888999999999999999 78888899999999999
Q ss_pred cccCCCCCCCccccCCceeeeecCCCCCcc
Q 002410 488 ENNSFVGEIPPALLTGKVIFKYDNNPKLHK 517 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~~~~~~~~~~N~~~c~ 517 (927)
++|.++ .+|......+..+.+.+|++.|.
T Consensus 326 ~~N~i~-~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 326 DHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCccc-eeCchhhccCCEEEcCCCCccch
Confidence 999998 67766666788899999999874
No 330
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.90 E-value=8e-10 Score=128.58 Aligned_cols=110 Identities=17% Similarity=0.192 Sum_probs=97.1
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.+|+.|+|++|++++..+..+.++++|+.|+|++|++++..+. |..+++|+.|+|++|++++..|..|..+++|+.|+|
T Consensus 224 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 303 (477)
T 2id5_A 224 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303 (477)
T ss_dssp CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEEC
T ss_pred ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEEC
Confidence 3799999999999954446799999999999999999998885 999999999999999999999999999999999999
Q ss_pred cccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 488 ENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
++|+|+ .+|...+. .+..+.+.+|++.|.+.
T Consensus 304 ~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 304 SGNQLT-TLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CSSCCS-CCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CCCcCc-eeCHhHcCCCcccCEEEccCCCccCccc
Confidence 999999 56665543 56788899999998753
No 331
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.90 E-value=1.1e-09 Score=136.71 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=79.8
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCC-CC-cCcccccceeecccccccCCCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL-PD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~-p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
+++++.|+|++|.+++..|..|.+|++|++|+|++|.+.+.+ |+ |.+|++|++|+|++|++++..|..|++|++|+.|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 567888888888888877888888888888888888666665 43 7888888888888888887778888888888888
Q ss_pred cccccCCCCCCCcc--ccC--CceeeeecCCCC
Q 002410 486 HIENNSFVGEIPPA--LLT--GKVIFKYDNNPK 514 (927)
Q Consensus 486 ~l~~N~l~g~iP~~--~~~--~~~~~~~~~N~~ 514 (927)
+|++|.+++.+|.. +.. .+..+.+.+|..
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l 135 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQI 135 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcc
Confidence 88888887766654 222 455566666643
No 332
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.89 E-value=2e-09 Score=115.64 Aligned_cols=105 Identities=19% Similarity=0.241 Sum_probs=67.5
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
++++.|+|++|++++..+..|.++++|+.|+|++|++++..|. |.++++|+.|+|++|++++..+..++.+++|+.|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 4666777777777655555666777777777777777666654 666777777777777776555556666777777777
Q ss_pred cccCCCC-CCCccccC--CceeeeecCCC
Q 002410 488 ENNSFVG-EIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 488 ~~N~l~g-~iP~~~~~--~~~~~~~~~N~ 513 (927)
++|.+++ .+|..+.. .+..+.+.+|.
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCC
Confidence 7777664 24555443 45555555554
No 333
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.89 E-value=9.9e-10 Score=131.74 Aligned_cols=111 Identities=21% Similarity=0.211 Sum_probs=84.0
Q ss_pred CCceEEEEecCCCCccc---CCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccc
Q 002410 408 PPRITKIALSGKNLKGE---IPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ 483 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~---ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~ 483 (927)
.++++.|+|++|.+++. .+..+..+++|+.|+|++|++++.+|. |..+++|+.|+|++|++++.+|..+.++++|
T Consensus 448 l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L- 526 (606)
T 3t6q_A 448 LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI- 526 (606)
T ss_dssp CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-
T ss_pred CCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-
Confidence 45778888888888762 235677888888888888888887774 7888888888888888888888888888888
Q ss_pred cccccccCCCCCCCcccc--CCceeeeecCCCCCcccc
Q 002410 484 ELHIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKES 519 (927)
Q Consensus 484 ~L~l~~N~l~g~iP~~~~--~~~~~~~~~~N~~~c~~~ 519 (927)
.|+|++|++++.+|..+. ..+..+.+.+||+.|.+.
T Consensus 527 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 888888888855554443 266778888899888643
No 334
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.88 E-value=1.8e-09 Score=128.46 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=88.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+++++.|+|++|++++..|..|.++++|++|+|++|+|++..|+ |.++++|++|+|++|+++ .+|.. .+++|+.|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 46899999999999987778999999999999999999998886 899999999999999999 78887 899999999
Q ss_pred ccccCCCC-CCCccccC--CceeeeecCCCC
Q 002410 487 IENNSFVG-EIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g-~iP~~~~~--~~~~~~~~~N~~ 514 (927)
|++|++++ .+|..+.. .+..+.+.+|..
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l 158 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKF 158 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcc
Confidence 99999985 34555544 566777777754
No 335
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.88 E-value=5.4e-10 Score=136.90 Aligned_cols=93 Identities=31% Similarity=0.399 Sum_probs=85.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|+..+..|++|++|+.|+|++|+|+ .||..|++|++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 468999999999999 9999999999999999999999955446999999999999999998 89999999999999999
Q ss_pred cccCCCCCCCccccC
Q 002410 488 ENNSFVGEIPPALLT 502 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~ 502 (927)
++|.|+|.+|..+..
T Consensus 324 ~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 324 EGNPLEKQFLKILTE 338 (727)
T ss_dssp TTSCCCSHHHHHHHH
T ss_pred CCCccCCCChHHHhh
Confidence 999999988877643
No 336
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.88 E-value=2.2e-09 Score=130.69 Aligned_cols=106 Identities=23% Similarity=0.293 Sum_probs=74.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
+++++.|+|++|++++..+..|.++++|++|+|++|++++.+|+ |.+|++|++|+|++|++++..+..|+++++|+.|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 45788888888888876666788888888888888888887775 77777788888877777744444677777777777
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCC
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~ 513 (927)
|++|.+++..|..+.. .+..+.+.+|.
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 132 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNG 132 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCc
Confidence 7777777433333432 45555555553
No 337
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.88 E-value=5.5e-10 Score=122.61 Aligned_cols=107 Identities=18% Similarity=0.211 Sum_probs=82.8
Q ss_pred CCceEEEEecCCCCcccCCccc--cCCcccceecccCCCCCCCCCCcCcc-----cccceeecccccccCCCCCcCCCcc
Q 002410 408 PPRITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPDMSRL-----IDLRIVHLENNELTGSLPSYMGSLP 480 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l--~~l~~L~~L~Ls~N~l~g~~p~~~~l-----~~L~~L~Ls~N~l~g~iP~~l~~l~ 480 (927)
.++++.|+|++|+++|.+|..+ .++++|+.|+|++|++++.++.++.+ ++|++|+|++|++++..|..++.++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 3578888999999888888876 88888999999999888883346666 8888999999988877778888888
Q ss_pred ccccccccccCCCCCC--Cccc----cCCceeeeecCCCC
Q 002410 481 NLQELHIENNSFVGEI--PPAL----LTGKVIFKYDNNPK 514 (927)
Q Consensus 481 ~L~~L~l~~N~l~g~i--P~~~----~~~~~~~~~~~N~~ 514 (927)
+|+.|+|++|++.|.+ |..+ ...+..+.+.+|..
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l 213 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcC
Confidence 8999999988887653 3333 22556666666643
No 338
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.87 E-value=1.3e-09 Score=107.93 Aligned_cols=83 Identities=22% Similarity=0.227 Sum_probs=48.4
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCC-CCcCCCcccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELH 486 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~i-P~~l~~l~~L~~L~ 486 (927)
++|+.|+|++|.+++. ..+..+++|+.|+|++|++++.+|. +..+++|+.|+|++|++++.. +..+..+++|+.|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 4566666666666543 5566666666666666666665554 344666666666666665321 14556666666666
Q ss_pred ccccCCC
Q 002410 487 IENNSFV 493 (927)
Q Consensus 487 l~~N~l~ 493 (927)
+++|.++
T Consensus 127 l~~N~l~ 133 (168)
T 2ell_A 127 LFNCEVT 133 (168)
T ss_dssp CCSSGGG
T ss_pred eeCCcCc
Confidence 6666666
No 339
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.86 E-value=1.9e-09 Score=119.29 Aligned_cols=106 Identities=22% Similarity=0.197 Sum_probs=93.6
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
++++.|+|++|.+++..|..+.++++|+.|+|++|++++.+|. +..+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 5899999999999988889999999999999999999999885 999999999999999999 89999999999999999
Q ss_pred cccCCCCCCCccccC---------CceeeeecCCCCCc
Q 002410 488 ENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 516 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~---------~~~~~~~~~N~~~c 516 (927)
++|+++ .+|...+. .+..+.+.+||..+
T Consensus 272 ~~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 272 HTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp CSSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 999999 56554332 24567788998764
No 340
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.86 E-value=6.3e-10 Score=111.30 Aligned_cols=87 Identities=22% Similarity=0.201 Sum_probs=79.2
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCC--cCCCccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQEL 485 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~--~l~~l~~L~~L 485 (927)
++++.|+|++|+|++. +.|.++++|+.|+|++|+|++.+|. +..+++|+.|+|++|+++ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999975 7899999999999999999988777 499999999999999996 7887 89999999999
Q ss_pred cccccCCCCCCCcc
Q 002410 486 HIENNSFVGEIPPA 499 (927)
Q Consensus 486 ~l~~N~l~g~iP~~ 499 (927)
++++|.++ .+|..
T Consensus 119 ~l~~N~i~-~~~~~ 131 (176)
T 1a9n_A 119 CILRNPVT-NKKHY 131 (176)
T ss_dssp ECCSSGGG-GSTTH
T ss_pred EecCCCCC-CcHhH
Confidence 99999998 67764
No 341
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.86 E-value=2.8e-09 Score=117.90 Aligned_cols=115 Identities=22% Similarity=0.341 Sum_probs=95.3
Q ss_pred CCCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccc
Q 002410 396 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 466 (927)
Q Consensus 396 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N 466 (927)
|.|..+.|+.. .+++++.|+|++|++++..|..|.++++|+.|+|++|++++.+|. |.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 46777777642 245799999999999987788999999999999999999998885 999999999999999
Q ss_pred cccCCCCCcCCCccccccccccccCCCCCCCccccC---CceeeeecCCCC
Q 002410 467 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPK 514 (927)
Q Consensus 467 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~ 514 (927)
+++ .+|..+. ++|+.|++++|.++ .+|...+. .+..+.+.+|..
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCcc
Confidence 999 7888776 79999999999999 56654332 566677777765
No 342
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.85 E-value=6.7e-10 Score=107.71 Aligned_cols=88 Identities=18% Similarity=0.186 Sum_probs=78.6
Q ss_pred CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCC-CCCcCCCcccccc
Q 002410 407 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQE 484 (927)
Q Consensus 407 ~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~-iP~~l~~l~~L~~ 484 (927)
..++++.|+|++|++++. ..++++++|+.|+|++|++++.+|. +..+++|+.|+|++|++++. .|..++.+++|+.
T Consensus 40 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 40 EFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp TCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCE
T ss_pred hcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCE
Confidence 346899999999999966 8899999999999999999998886 67799999999999999963 4588999999999
Q ss_pred ccccccCCCCCC
Q 002410 485 LHIENNSFVGEI 496 (927)
Q Consensus 485 L~l~~N~l~g~i 496 (927)
|++++|.+++..
T Consensus 118 L~l~~N~l~~~~ 129 (149)
T 2je0_A 118 LDLFNCEVTNLN 129 (149)
T ss_dssp EECTTCGGGGST
T ss_pred EeCcCCcccchH
Confidence 999999999543
No 343
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.85 E-value=1.1e-09 Score=136.88 Aligned_cols=108 Identities=22% Similarity=0.303 Sum_probs=92.5
Q ss_pred CCceEEEEecCCCCc-----ccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccc
Q 002410 408 PPRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPN 481 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~-----g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~ 481 (927)
.++++.|+|++|.++ +..|..|.+|++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 467899999999987 44556788999999999999999999986 89999999999999999976666665 89
Q ss_pred cccccccccCCCCCCCccccCCceeeeecCCCCCccc
Q 002410 482 LQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHKE 518 (927)
Q Consensus 482 L~~L~l~~N~l~g~iP~~~~~~~~~~~~~~N~~~c~~ 518 (927)
|+.|+|++|+|+|.+|..+ ..+..+.+.+||+.|.+
T Consensus 528 L~~L~Ls~N~l~~~~~~~~-~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVF-VSLSVLDITHNKFICEC 563 (844)
T ss_dssp CCEEEEEEECCCCCCSCCC-SSCCEEEEEEECCCCSS
T ss_pred ccEEECCCCcCCCCChhHh-CCcCEEEecCCCccccc
Confidence 9999999999998777654 46778899999999854
No 344
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.84 E-value=1.7e-09 Score=118.87 Aligned_cols=107 Identities=21% Similarity=0.196 Sum_probs=92.2
Q ss_pred CCceEEEEecCCCCcccCCcccc-CCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++++.|+|++|++++..|..+. .+++|+.|+|++|+|++. |....+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWIS 220 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEE
Confidence 36899999999999988888774 789999999999999887 55556999999999999999 5666799999999999
Q ss_pred ccccCCCCCCCccccC--CceeeeecCCCCCcc
Q 002410 487 IENNSFVGEIPPALLT--GKVIFKYDNNPKLHK 517 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c~ 517 (927)
|++|+++ .+|..+.. .+..+.+.+|+..|.
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 9999999 78887644 677888999999874
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.83 E-value=3.4e-09 Score=126.11 Aligned_cols=107 Identities=21% Similarity=0.319 Sum_probs=77.6
Q ss_pred CceEEEEecCCCCcccCCcc-ccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPE-LKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~-l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++++.|+|++|++++.+|.. +..+++|+.|+|++|+|++.+|. +. ++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 403 ~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~ 479 (562)
T 3a79_B 403 SSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELN 479 (562)
T ss_dssp TTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEE
T ss_pred CCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEE
Confidence 45666666666666545543 55666666666666666665553 32 67888888888888 7888888999999999
Q ss_pred ccccCCCCCCCccccC---CceeeeecCCCCCcccc
Q 002410 487 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKES 519 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~---~~~~~~~~~N~~~c~~~ 519 (927)
|++|+|+ .+|...+. .+..+.+.+||+.|.+.
T Consensus 480 L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 480 VASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 9999999 78877332 56678889999998643
No 346
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.83 E-value=4.6e-09 Score=125.95 Aligned_cols=106 Identities=19% Similarity=0.190 Sum_probs=93.7
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|.+++..|..|++|++|+.|+|++|.|++.++. |+++++|+.|+|++|++++..|..|+.+++|+.|+
T Consensus 98 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE
Confidence 46899999999999988888899999999999999999988887 69999999999999999998899999999999999
Q ss_pred ccccCCCCCCCccccCCceeeeecCCCC
Q 002410 487 IENNSFVGEIPPALLTGKVIFKYDNNPK 514 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~~~~~~~~~~N~~ 514 (927)
|++|.++ .+|...+..+..+.+.+|..
T Consensus 178 L~~N~l~-~~~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 178 LSSNRLT-HVDLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CTTSCCS-BCCGGGCTTCSEEECCSSCC
T ss_pred CcCCCCC-CcChhhhhhhhhhhcccCcc
Confidence 9999999 45666666666666666643
No 347
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.83 E-value=2.4e-09 Score=116.83 Aligned_cols=108 Identities=19% Similarity=0.259 Sum_probs=93.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCC-CCC-CcCcccccceeecccccccCCCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG-PLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g-~~p-~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
.++|+.|+|++|.+.+..|..+.++++|+.|+|++|.+++ .+| .+..+++|+.|+|++|++++..|..+..+++|+.|
T Consensus 125 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 125 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 4689999999999999999999999999999999999998 456 49999999999999999998889999999999999
Q ss_pred cccccCCCCCCCcccc--CCceeeeecCCCCC
Q 002410 486 HIENNSFVGEIPPALL--TGKVIFKYDNNPKL 515 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~--~~~~~~~~~~N~~~ 515 (927)
+|++|.+++..+..+. ..+..+.+.+|...
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 9999999954443443 36677888888654
No 348
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.82 E-value=7.3e-09 Score=115.91 Aligned_cols=142 Identities=15% Similarity=0.230 Sum_probs=107.3
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEcc--Ccc-chhHHHHHHHHHHHHhcC--CCceeeeeeeeecC---ceEEEEEE
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMA--DSC-SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEE---HQRILVYE 681 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~--~~~-~~~~~~~~~E~~~L~~l~--HpnIv~l~~~~~~~---~~~~LV~E 681 (927)
.+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+++++.++ +..+.+++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 357899999999999876 4678888876 322 123456888999999997 45678888888766 45899999
Q ss_pred ecCCCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 002410 682 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC------------------------------------- 724 (927)
Q Consensus 682 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~------------------------------------- 724 (927)
|++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 122 FVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred ecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 99998775421 234678888999999999999999720
Q ss_pred ------------------CCCeEecCCCCCcccccCCCc--EEEeeccccccc
Q 002410 725 ------------------NPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQA 757 (927)
Q Consensus 725 ------------------~~~ivH~DLkp~NILld~~~~--~kL~DFGla~~~ 757 (927)
...++|||+++.||+++.++. +.|.||+.+...
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999987753 689999988753
No 349
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.81 E-value=4.9e-09 Score=115.72 Aligned_cols=116 Identities=24% Similarity=0.366 Sum_probs=90.1
Q ss_pred CCCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccc
Q 002410 396 VPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 466 (927)
Q Consensus 396 ~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N 466 (927)
|.|..+.|+.. .++.++.|+|++|++++..+..|.++++|++|+|++|++++..|. |.++++|++|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 45666766532 245789999999999977777899999999999999999998774 899999999999999
Q ss_pred cccCCCCCcCCCccccccccccccCCCCCCCcccc--CCceeeeecCCCC
Q 002410 467 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPK 514 (927)
Q Consensus 467 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~--~~~~~~~~~~N~~ 514 (927)
+++ .+|..+. ++|+.|++++|.+++..|..+. ..+..+.+.+|..
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCC
T ss_pred cCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcC
Confidence 998 7887765 7899999999999844333332 2556667776654
No 350
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.80 E-value=8e-09 Score=116.83 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=87.0
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
.++|+.|+|++|++++..|..|+++++|+.|+|++|+++..++. |.++++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 46789999999999987778889999999999999999877766 68899999999999999977788889999999999
Q ss_pred ccccCCCCCCCccccCCceeeeecCCC
Q 002410 487 IENNSFVGEIPPALLTGKVIFKYDNNP 513 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~~~~~~~~~~N~ 513 (927)
+++|.++ .++......+..+.+.+|.
T Consensus 172 l~~n~l~-~~~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 172 LSSNRLT-HVDLSLIPSLFHANVSYNL 197 (390)
T ss_dssp CCSSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred CCCCcCC-ccccccccccceeeccccc
Confidence 9999988 4565555566666666664
No 351
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.80 E-value=3.3e-09 Score=108.10 Aligned_cols=102 Identities=17% Similarity=0.219 Sum_probs=60.8
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 488 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~ 488 (927)
++++.|+|++|+++ .+| .+..+++|+.|+|++|.++. ++.+..+++|+.|+|++|++++..|..++.+++|+.|+++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 35666666666666 555 56666666666666664433 2356666666666666666666566666666666666666
Q ss_pred ccCCCCCCCccccC--CceeeeecCCC
Q 002410 489 NNSFVGEIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 489 ~N~l~g~iP~~~~~--~~~~~~~~~N~ 513 (927)
+|.+++..|..+.. .+..+.+.+|.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 66666555544432 34445555554
No 352
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.79 E-value=2.8e-09 Score=125.39 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=89.5
Q ss_pred CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCC--CCCC-cCcccccceeecccccccCCCCCc-CCCcccc
Q 002410 407 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG--PLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNL 482 (927)
Q Consensus 407 ~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g--~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~-l~~l~~L 482 (927)
..++++.|+|++|++++.+|..++++++|+.|+|++|++++ .+|. +..+++|+.|+|++|++++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 34678899999999998888889999999999999999987 4454 888999999999999999767764 7788899
Q ss_pred ccccccccCCCCCCCccccCCceeeeecCCCC
Q 002410 483 QELHIENNSFVGEIPPALLTGKVIFKYDNNPK 514 (927)
Q Consensus 483 ~~L~l~~N~l~g~iP~~~~~~~~~~~~~~N~~ 514 (927)
+.|++++|++++.+|..+...+..+.+++|..
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l 433 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI 433 (520)
T ss_dssp CEEECCSSCCCGGGGGSCCTTCCEEECCSSCC
T ss_pred CEEECcCCCCCcchhhhhcccCCEEECCCCcc
Confidence 99999999998888887766677777777754
No 353
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.78 E-value=2.4e-09 Score=125.87 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=78.7
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
++++.|+|++|++++..|..|.++++|++|+|++|++++.+|+ |.++++|++|+|++|+++ .+|.. .+++|+.|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 5788888888888876667788888888888888888887774 788888888888888888 67766 7788888888
Q ss_pred cccCCCC-CCCccccC--CceeeeecCCCC
Q 002410 488 ENNSFVG-EIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 488 ~~N~l~g-~iP~~~~~--~~~~~~~~~N~~ 514 (927)
++|.+++ .+|..+.. .+..+.+.+|..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l 127 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHL 127 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSC
T ss_pred cCCccccccchhhhccCCcceEEEecCccc
Confidence 8888875 46666644 556666666654
No 354
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.77 E-value=2.5e-09 Score=117.20 Aligned_cols=107 Identities=17% Similarity=0.185 Sum_probs=79.2
Q ss_pred CCceEEEEecCCCCccc--CC--ccccCCcccceecccCCCCCCCCCC----cCcccccceeecccccccCCCCCcCCCc
Q 002410 408 PPRITKIALSGKNLKGE--IP--PELKNMEALTELWLDGNFLTGPLPD----MSRLIDLRIVHLENNELTGSLPSYMGSL 479 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~--ip--~~l~~l~~L~~L~Ls~N~l~g~~p~----~~~l~~L~~L~Ls~N~l~g~iP~~l~~l 479 (927)
.++|+.|+|++|++.|. ++ ..++++++|++|+|++|+|+...+. +..+++|+.|+|++|+|++.+|..++.+
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 168 FPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp CTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 45788888888887753 32 2346788888888888888644331 4677888888888888887778777776
Q ss_pred ---cccccccccccCCCCCCCccccCCceeeeecCCCCC
Q 002410 480 ---PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNPKL 515 (927)
Q Consensus 480 ---~~L~~L~l~~N~l~g~iP~~~~~~~~~~~~~~N~~~ 515 (927)
++|+.|+|++|+|+ .+|..+...+..+.+++|...
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLN 285 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCC
Confidence 58888888888888 788877777777777777543
No 355
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.75 E-value=5.4e-09 Score=123.65 Aligned_cols=107 Identities=19% Similarity=0.183 Sum_probs=78.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccC-CCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g-~iP~~l~~l~~L~~L 485 (927)
.++++.|+|++|++++..|..|++|++|++|+|++|++++.+|+ |+++++|++|+|++|++++ .+|..++++++|+.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 35788888888888877777788888888888888888887776 7888888888888888876 456777888888888
Q ss_pred cccccCCCCCCCccccC---CceeeeecCCCC
Q 002410 486 HIENNSFVGEIPPALLT---GKVIFKYDNNPK 514 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~ 514 (927)
++++|.+.+.+|...+. .+..+.+.+|..
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 88888765577653332 344555565543
No 356
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.75 E-value=9.4e-09 Score=125.04 Aligned_cols=106 Identities=22% Similarity=0.193 Sum_probs=80.8
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
++|+.|+|++|++++..+..|++|++|++|+|++|++++.+|. |+++++|++|+|++|++++..|..++++++|+.|++
T Consensus 73 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 152 (680)
T 1ziw_A 73 PMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLL 152 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEEC
T ss_pred cCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEc
Confidence 5788888888888854444688888888888888888887774 888888888888888888888888888888888888
Q ss_pred cccCCCCCCCcccc----CCceeeeecCCCC
Q 002410 488 ENNSFVGEIPPALL----TGKVIFKYDNNPK 514 (927)
Q Consensus 488 ~~N~l~g~iP~~~~----~~~~~~~~~~N~~ 514 (927)
++|.+++..|..+. ..+..+.+.+|..
T Consensus 153 ~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 153 SNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred cCCcccccCHHHhhccccccccEEECCCCcc
Confidence 88888855554332 2455666677643
No 357
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.74 E-value=1.2e-08 Score=113.94 Aligned_cols=104 Identities=19% Similarity=0.203 Sum_probs=85.8
Q ss_pred CCCCccEEEeCC--------CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC--cCcccccce-eec
Q 002410 395 PVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD--MSRLIDLRI-VHL 463 (927)
Q Consensus 395 ~~~w~~~~c~~~--------~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~l~~L~~-L~L 463 (927)
.|.|..+.|+.. .+.+++.|+|++|+|+...+..|.+|++|+.|+|++|++.+.+|. |.+|++|+. +.+
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 356677778653 245799999999999944445799999999999999999888774 889998765 777
Q ss_pred ccccccCCCCCcCCCccccccccccccCCCCCCCcc
Q 002410 464 ENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPA 499 (927)
Q Consensus 464 s~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~ 499 (927)
+.|+|++..|..|..+++|+.|++++|+++ .+|..
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~ 122 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDV 122 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCC
T ss_pred cCCcccccCchhhhhccccccccccccccc-cCCch
Confidence 889999777889999999999999999999 55543
No 358
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.73 E-value=4.1e-09 Score=115.15 Aligned_cols=183 Identities=22% Similarity=0.237 Sum_probs=122.4
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCc--eeeeeeeeecCc---eEEEEEEecC
Q 002410 611 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRN--LVPLIGYCEEEH---QRILVYEYMH 684 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-Hpn--Iv~l~~~~~~~~---~~~LV~E~~~ 684 (927)
+.++.|....||+.. +.+++|+.... .....+.+|.++|+.+. +.. +.+++......+ ..++|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 568999999999864 56889986532 34567889999999884 332 344444443333 3478999999
Q ss_pred CCCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 002410 685 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG----------------------------------------- 723 (927)
Q Consensus 685 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~----------------------------------------- 723 (927)
|.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 988765332 2366777888888999999888861
Q ss_pred --------------CCCCeEecCCCCCcccccC--CCcEEEeeccccccccccccccccccccCCCc---cCCCccCC--
Q 002410 724 --------------CNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLTHISSVARGTVGY---LDPEYYGN-- 782 (927)
Q Consensus 724 --------------~~~~ivH~DLkp~NILld~--~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y---~APE~l~~-- 782 (927)
....++|+|++|.||++++ +..+.|+||+.+........- .. ...+ ..|+....
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl-~~----~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF-IS----LMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH-HT----TCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH-HH----HHhhccccCHHHHHHHH
Confidence 1145899999999999998 566889999988654321110 00 0001 12221100
Q ss_pred ---C---------CCCcchhHHHHHHHHHHHHhCCCCCC
Q 002410 783 ---Q---------QLTEKSDVYSFGVVLLELISGKKPVS 809 (927)
Q Consensus 783 ---~---------~~s~ksDVwSlGvlL~eLltG~~Pf~ 809 (927)
+ ......+.|+++.++|.+.+|..+|-
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0 01123689999999999999988764
No 359
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.73 E-value=5.8e-09 Score=109.55 Aligned_cols=103 Identities=21% Similarity=0.260 Sum_probs=72.9
Q ss_pred CceEEEEecC-CCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccc---eeecccc-cccCCCCCcCCCccccc
Q 002410 409 PRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLR---IVHLENN-ELTGSLPSYMGSLPNLQ 483 (927)
Q Consensus 409 ~~l~~L~L~~-n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~---~L~Ls~N-~l~g~iP~~l~~l~~L~ 483 (927)
++++.|+|++ |++++..+..|.++++|+.|+|++|++++ +|.+..+++|+ .|+|++| ++++..+..|..+++|+
T Consensus 80 ~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 80 SKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET 158 (239)
T ss_dssp TTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSE
T ss_pred cCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcce
Confidence 4677888877 77776555677778888888888888777 45576676666 8888888 77755555677778888
Q ss_pred -cccccccCCCCCCCccccC--CceeeeecCCC
Q 002410 484 -ELHIENNSFVGEIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 484 -~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~ 513 (927)
.|++++|.++ .+|...+. .+..+.+.+|+
T Consensus 159 ~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 159 LTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred eEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 8888888877 77766554 34445556664
No 360
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.72 E-value=1.2e-08 Score=121.02 Aligned_cols=91 Identities=18% Similarity=0.303 Sum_probs=61.0
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC-CcCcccccceeecccccccC-CCCCcCCCcccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQELH 486 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g-~iP~~l~~l~~L~~L~ 486 (927)
++|+.|+|++|++++..|..|++|++|++|+|++|++++..+ .+++|++|++|+|++|++++ .+|..++++++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~ 155 (570)
T 2z63_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (570)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred hhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEe
Confidence 466777777777766666667777777777777777766655 36777777777777777765 4567777777777777
Q ss_pred ccccCCCCCCCcc
Q 002410 487 IENNSFVGEIPPA 499 (927)
Q Consensus 487 l~~N~l~g~iP~~ 499 (927)
+++|.+++..|..
T Consensus 156 l~~n~l~~~~~~~ 168 (570)
T 2z63_A 156 LSSNKIQSIYCTD 168 (570)
T ss_dssp CTTSCCCEECGGG
T ss_pred CcCCccceecHHH
Confidence 7777776444433
No 361
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.72 E-value=2.1e-09 Score=117.91 Aligned_cols=106 Identities=18% Similarity=0.160 Sum_probs=74.2
Q ss_pred CCceEEEEecCCCCcccCCccccCC-----cccceecccCCCCCCCCCC-cCcccccceeecccccccCC--CCCcC--C
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNM-----EALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGS--LPSYM--G 477 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l-----~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~--iP~~l--~ 477 (927)
.++++.|+|++|++++. |..++.+ ++|++|+|++|++++.+|. |+++++|+.|+|++|++.|. +|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 45788888888888866 7777776 7888888888888887764 77888888888888887765 33344 7
Q ss_pred CccccccccccccCCCC--CCCcccc---CCceeeeecCCCC
Q 002410 478 SLPNLQELHIENNSFVG--EIPPALL---TGKVIFKYDNNPK 514 (927)
Q Consensus 478 ~l~~L~~L~l~~N~l~g--~iP~~~~---~~~~~~~~~~N~~ 514 (927)
.+++|+.|+|++|++++ .+|..++ ..+..+.+++|..
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 240 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSL 240 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCC
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcC
Confidence 77888888888888772 2333332 3556666666654
No 362
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.71 E-value=5.7e-09 Score=121.89 Aligned_cols=106 Identities=14% Similarity=0.071 Sum_probs=90.4
Q ss_pred CCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cC-cccccceeecccccccCCCCCcCCCcccccc
Q 002410 407 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MS-RLIDLRIVHLENNELTGSLPSYMGSLPNLQE 484 (927)
Q Consensus 407 ~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~-~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~ 484 (927)
..++|+.|+|++|+|++..|..++++++|+.|+|++|.|++.+|. +. .+++|+.|+|++|+|++. |. +..+++|+.
T Consensus 118 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 195 (487)
T 3oja_A 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKT 195 (487)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCE
T ss_pred ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCE
Confidence 346899999999999999999999999999999999999998885 65 899999999999999966 33 346999999
Q ss_pred ccccccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 485 LHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 485 L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
|+|++|.|++ +|+.+.. .+..+.+++|...
T Consensus 196 L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 196 LDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp EECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC
T ss_pred EECCCCCCCC-CCHhHcCCCCccEEEecCCcCc
Confidence 9999999995 5555543 6777888888644
No 363
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.71 E-value=6.5e-09 Score=113.81 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=58.1
Q ss_pred ceEEEEecCCCCcccCCccc--cCCcccceecccCCCCCCCCCC-----cCcccccceeecccccccCCCCCcCCCcccc
Q 002410 410 RITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPD-----MSRLIDLRIVHLENNELTGSLPSYMGSLPNL 482 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l--~~l~~L~~L~Ls~N~l~g~~p~-----~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L 482 (927)
+++.|+|++|++.+.+|..+ .++++|+.|+|++|++++..|. +..+++|+.|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 46677777777777777666 6677777777777777765552 3456677777777777776666667777777
Q ss_pred ccccccccCCCC
Q 002410 483 QELHIENNSFVG 494 (927)
Q Consensus 483 ~~L~l~~N~l~g 494 (927)
+.|+|++|++.+
T Consensus 172 ~~L~Ls~N~l~~ 183 (310)
T 4glp_A 172 TSLDLSDNPGLG 183 (310)
T ss_dssp CEEECCSCTTCH
T ss_pred CEEECCCCCCcc
Confidence 777777776654
No 364
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.71 E-value=6.2e-09 Score=123.38 Aligned_cols=109 Identities=25% Similarity=0.364 Sum_probs=67.9
Q ss_pred CCCCCCC--CCccE-EEeCCCCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccc
Q 002410 390 GDPCVPV--PWEWV-TCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENN 466 (927)
Q Consensus 390 gdpC~~~--~w~~~-~c~~~~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N 466 (927)
++||... .|.++ .|.|. +++.|+|++|+|++ +|..+. ++|+.|+|++|+|+. +| ..+++|+.|+|++|
T Consensus 40 ~~~~~~~~~~~~~l~~C~~~---~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~Ls~N 110 (571)
T 3cvr_A 40 ALPGENRNEAVSLLKECLIN---QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDACDN 110 (571)
T ss_dssp CCTTCCHHHHHHHHHHHHHT---TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEECCSS
T ss_pred CCccccccchhhhccccccC---CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEccCC
Confidence 4566321 46776 67654 57777777777775 666553 667777777777773 44 44666777777777
Q ss_pred cccCCCCCcCCCccccccccccccCCCCCCCccccCCceeeeecCCC
Q 002410 467 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLTGKVIFKYDNNP 513 (927)
Q Consensus 467 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~iP~~~~~~~~~~~~~~N~ 513 (927)
+|++ +|. +.+ +|+.|+|++|+|++ +|. ....+..+.+++|.
T Consensus 111 ~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~ 151 (571)
T 3cvr_A 111 RLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADNNQ 151 (571)
T ss_dssp CCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSC
T ss_pred CCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCCCc
Confidence 7765 666 544 66666666666664 665 44445555555553
No 365
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.70 E-value=1.2e-08 Score=113.91 Aligned_cols=105 Identities=18% Similarity=0.220 Sum_probs=82.3
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCC--cCCCcccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQE 484 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~--~l~~l~~L~~ 484 (927)
.++|+.|+|++|++++..|..|.++++|++|+|++|++++.++. +.++++|++|+|++|+++ .+|. .+..+++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 46789999999999987788899999999999999999887776 888999999999999998 5655 7888999999
Q ss_pred ccccccC-CCCCCCc-cccC--CceeeeecCCCC
Q 002410 485 LHIENNS-FVGEIPP-ALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 485 L~l~~N~-l~g~iP~-~~~~--~~~~~~~~~N~~ 514 (927)
|++++|+ +. .+|. .+.. .+..+.+.+|..
T Consensus 154 L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 154 LRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp EEEEESSSCC-EECTTTTTTCCEEEEEEEEETTC
T ss_pred EECCCCcccc-ccCHHHccCCCCCCEEECCCCCc
Confidence 9999985 55 5544 3332 445566666653
No 366
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.65 E-value=1.5e-08 Score=110.89 Aligned_cols=104 Identities=21% Similarity=0.326 Sum_probs=69.9
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|++++..+ +.++++|+.|+|++|++++..+ +..+++|+.|+|++|++++. |. +..+++|+.|+|
T Consensus 128 l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L 202 (308)
T 1h6u_A 128 LSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHL 202 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcC-hh-hcCCCCCCEEEc
Confidence 4567777777777774433 7777777777777777777555 77777777788877777743 33 677777778888
Q ss_pred cccCCCCCCCccccCCceeeeecCCCCCc
Q 002410 488 ENNSFVGEIPPALLTGKVIFKYDNNPKLH 516 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~~~~~~~~~~N~~~c 516 (927)
++|++++..|-.-...+..+.+.+|+..+
T Consensus 203 ~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 203 KNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred cCCccCccccccCCCCCCEEEccCCeeec
Confidence 88877744332222355566666666543
No 367
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.63 E-value=1.7e-08 Score=111.96 Aligned_cols=103 Identities=21% Similarity=0.288 Sum_probs=79.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++++.|+|++|.+++ + +.+..+++|+.|+|++|++++. |.+..+++|+.|+|++|++++..|..++.+++|+.|++
T Consensus 242 l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 318 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFL 318 (347)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEEC
T ss_pred CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEc
Confidence 4578888888888885 3 4678888888888888888875 66888888888888888888877888888888888888
Q ss_pred cccCCCCCCCccccCCceeeeecCCC
Q 002410 488 ENNSFVGEIPPALLTGKVIFKYDNNP 513 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~~~~~~~~~~N~ 513 (927)
++|.+++..|-.-...+..+.+.+|+
T Consensus 319 ~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 319 SQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred cCCccccccChhhhhccceeehhhhc
Confidence 88888866553444466677777775
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.62 E-value=4.5e-08 Score=104.58 Aligned_cols=101 Identities=26% Similarity=0.317 Sum_probs=69.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|++++. |+ +.+|++|+.|+|++|+|++. |.+.. ++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 62 l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~l-~~~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKNL-NGIPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSCC-TTCCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCCc-Ccccc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 35788888888888854 43 88888888888888888774 33333 778888888888874 43 4777888888888
Q ss_pred cccCCCCCCCc-cccCCceeeeecCCCCC
Q 002410 488 ENNSFVGEIPP-ALLTGKVIFKYDNNPKL 515 (927)
Q Consensus 488 ~~N~l~g~iP~-~~~~~~~~~~~~~N~~~ 515 (927)
++|++++ +|. .-...+..+.+.+|...
T Consensus 136 s~N~i~~-~~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 136 RNNKLKS-IVMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp TTSCCCB-CGGGGGCTTCCEEECTTSCCC
T ss_pred CCCcCCC-ChHHccCCCCCEEECCCCcCc
Confidence 8888873 442 11235566666666543
No 369
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.62 E-value=2.7e-08 Score=107.93 Aligned_cols=101 Identities=23% Similarity=0.384 Sum_probs=78.7
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|++++ + +.+.++++|+.|+|++|++++. +.+..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 111 l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 111 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 4678888999988885 3 5688888899999999988886 678888889999999998886544 888888999999
Q ss_pred cccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 488 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
++|.++ .+|. +.. .+..+.+.+|+..
T Consensus 186 ~~N~i~-~l~~-l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 186 SKNHIS-DLRA-LAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CSSCCC-BCGG-GTTCTTCSEEEEEEEEEE
T ss_pred CCCcCC-CChh-hccCCCCCEEECcCCccc
Confidence 999888 4554 322 5566677777644
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.62 E-value=4.2e-08 Score=106.46 Aligned_cols=102 Identities=24% Similarity=0.294 Sum_probs=66.0
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|.+++ +| .+.++++|+.|+|++|++++. +.+..+++|+.|+|++|++++. ..++.+++|+.|++
T Consensus 89 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp CTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 3567777777777764 33 377777777777777777764 5677777777777777777743 45677777777777
Q ss_pred cccCCCCCCCccccCCceeeeecCCCC
Q 002410 488 ENNSFVGEIPPALLTGKVIFKYDNNPK 514 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~~~~~~~~~~N~~ 514 (927)
++|++++..|-.-...+..+.+++|..
T Consensus 164 ~~N~l~~~~~l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 164 EDNQISDIVPLAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCC
T ss_pred cCCccccchhhcCCCccCEEECCCCcC
Confidence 777777443312222455566666643
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.59 E-value=4.7e-08 Score=116.95 Aligned_cols=100 Identities=22% Similarity=0.370 Sum_probs=65.9
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|+|++ + +.+.+|++|+.|+|++|+|++. +.+..|++|+.|+|++|+|++.+| +..|++|+.|+|
T Consensus 108 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 182 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182 (605)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEEC
Confidence 3567777777777774 3 4577777777777777777765 567777777777777777775555 677777777777
Q ss_pred cccCCCCCCCcccc--CCceeeeecCCCC
Q 002410 488 ENNSFVGEIPPALL--TGKVIFKYDNNPK 514 (927)
Q Consensus 488 ~~N~l~g~iP~~~~--~~~~~~~~~~N~~ 514 (927)
++|+|++ +|. +. ..+..+.+.+|+.
T Consensus 183 s~N~i~~-l~~-l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 183 SKNHISD-LRA-LAGLKNLDVLELFSQEC 209 (605)
T ss_dssp CSSCCCB-CGG-GTTCTTCSEEECCSEEE
T ss_pred cCCCCCC-ChH-HccCCCCCEEEccCCcC
Confidence 7777773 432 22 2455555555543
No 372
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.59 E-value=4.9e-08 Score=106.83 Aligned_cols=103 Identities=23% Similarity=0.389 Sum_probs=81.6
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|++++ +|. +.++++|+.|+|++|++++..+ +..+++|+.|+|++|++++ +|. +..+++|+.|++
T Consensus 106 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 106 LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKA 180 (308)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEEC
Confidence 4689999999999985 443 8899999999999999988665 8889999999999999985 444 889999999999
Q ss_pred cccCCCCCCCccccCCceeeeecCCCCC
Q 002410 488 ENNSFVGEIPPALLTGKVIFKYDNNPKL 515 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~~~~~~~~~~N~~~ 515 (927)
++|.+++..|-.-...+..+.+.+|...
T Consensus 181 ~~n~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 181 DDNKISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CSSCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred CCCccCcChhhcCCCCCCEEEccCCccC
Confidence 9999984333222336667777777654
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.58 E-value=6.5e-08 Score=103.33 Aligned_cols=100 Identities=20% Similarity=0.292 Sum_probs=84.5
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|++++ +|.... ++|+.|+|
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 468999999999999 677 79999999999999999999887 9999999999999999995 665443 89999999
Q ss_pred cccCCCCCCCcccc--CCceeeeecCCCCC
Q 002410 488 ENNSFVGEIPPALL--TGKVIFKYDNNPKL 515 (927)
Q Consensus 488 ~~N~l~g~iP~~~~--~~~~~~~~~~N~~~ 515 (927)
++|++++ +|. +. ..+..+.+++|...
T Consensus 114 ~~N~l~~-~~~-l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 114 DNNELRD-TDS-LIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp CSSCCSB-SGG-GTTCTTCCEEECTTSCCC
T ss_pred cCCccCC-Chh-hcCcccccEEECCCCcCC
Confidence 9999994 553 33 36677788887643
No 374
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.58 E-value=3.9e-08 Score=117.64 Aligned_cols=100 Identities=24% Similarity=0.335 Sum_probs=51.0
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 488 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~ 488 (927)
++|+.|+|++|.|++ +| .|.+|++|+.|+|++|+|++ +|.+..|++|+.|+|++|+|++. ..++.|++|+.|+|+
T Consensus 87 ~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls 161 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLE 161 (605)
T ss_dssp TTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECC
T ss_pred CCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECc
Confidence 345555555555553 22 45555555555555555554 24455555555555555555532 345555555555555
Q ss_pred ccCCCCCCCccccCCceeeeecCCC
Q 002410 489 NNSFVGEIPPALLTGKVIFKYDNNP 513 (927)
Q Consensus 489 ~N~l~g~iP~~~~~~~~~~~~~~N~ 513 (927)
+|.|++..|-.-+..+..+.+.+|.
T Consensus 162 ~N~l~~~~~l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 162 DNQISDIVPLAGLTKLQNLYLSKNH 186 (605)
T ss_dssp SSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred CCcCCCchhhccCCCCCEEECcCCC
Confidence 5555544332122244444454443
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.58 E-value=9.7e-10 Score=112.16 Aligned_cols=103 Identities=23% Similarity=0.203 Sum_probs=72.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++++.|+|++|++++ +| .+.++++|+.|+|++|+|+..++.+..+++|+.|+|++|++++ +| .+..+++|+.|++
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 3567888888888875 66 7788888888888888887433336667888888888888874 55 5777788888888
Q ss_pred cccCCCCCCCc--ccc--CCceeeeecCCCCC
Q 002410 488 ENNSFVGEIPP--ALL--TGKVIFKYDNNPKL 515 (927)
Q Consensus 488 ~~N~l~g~iP~--~~~--~~~~~~~~~~N~~~ 515 (927)
++|+++ .+|. .+. ..+..+.+.+|+..
T Consensus 123 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 123 SNNKIT-NWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEECC-CHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CCCcCC-chhHHHHHhcCCCCCEEEecCCccc
Confidence 888887 4443 222 24556666777644
No 376
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.56 E-value=1.5e-09 Score=110.75 Aligned_cols=103 Identities=22% Similarity=0.327 Sum_probs=85.7
Q ss_pred CceEEEEecCCCCcccCCc------cccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccc
Q 002410 409 PRITKIALSGKNLKGEIPP------ELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNL 482 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~------~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L 482 (927)
.+++.++|+.++++|.+|. .+.++++|+.|+|++|+|++ +|.+.++++|+.|+|++|+++ .+|..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 3667777888888888887 89999999999999999999 568999999999999999999 789888888999
Q ss_pred ccccccccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 483 QELHIENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 483 ~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
+.|+|++|++++ +| .+.. .+..+.+.+|...
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 999999999994 66 3332 5666777777544
No 377
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.55 E-value=3.9e-08 Score=108.03 Aligned_cols=105 Identities=14% Similarity=0.076 Sum_probs=89.0
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-c-CcccccceeecccccccCCCCCcCCCccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-M-SRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~-~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
.++++.|+|++|++++..|..++.+++|+.|+|++|++++..|. + ..+++|+.|+|++|++++. |. ...+++|+.|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 46899999999999988888999999999999999999998775 5 5799999999999999954 44 3358999999
Q ss_pred cccccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 486 HIENNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 486 ~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
+|++|+++ .+|..+.. .+..+.+.+|...
T Consensus 197 ~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 197 DLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp ECCSSCCC-EECGGGGGGTTCSEEECTTSCCC
T ss_pred ECCCCcCC-cchhhhcccCcccEEECcCCccc
Confidence 99999999 56666543 6777888888644
No 378
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.54 E-value=9e-08 Score=113.41 Aligned_cols=96 Identities=23% Similarity=0.301 Sum_probs=67.7
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccc------
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNL------ 482 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L------ 482 (927)
++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.|. ++|+.|+|++|+|+ .+|. +.. +|
T Consensus 140 ~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~ 208 (571)
T 3cvr_A 140 ALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEET 208 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCS-SCCC-CC----------C
T ss_pred ccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cchhh--CCCCEEECcCCCCC-chhh-HHH--hhhccccc
Confidence 567888888888875 665 56778888888888877 44455 77888888888887 6777 554 66
Q ss_pred -ccccccccCCCCCCCccccC--CceeeeecCCCCCc
Q 002410 483 -QELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLH 516 (927)
Q Consensus 483 -~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c 516 (927)
+.|+|++|+|+ .||..++. .+..+.+.+|+..+
T Consensus 209 L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 209 EIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred ceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 78888888887 67776654 55667777777654
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.51 E-value=6.4e-08 Score=112.24 Aligned_cols=104 Identities=24% Similarity=0.278 Sum_probs=70.1
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++++.|+|++|++.+..| +..+++|+.|+|++|++++.+| +..+++|+.|+|++|++++. ..+.++++|+.|++
T Consensus 286 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 286 LTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 360 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred CCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeC
Confidence 3567777777777775433 6777777777777777777665 66777777777777777753 35677777777777
Q ss_pred cccCCCCCCCccccCCceeeeecCCCCCc
Q 002410 488 ENNSFVGEIPPALLTGKVIFKYDNNPKLH 516 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~~~~~~~~~~N~~~c 516 (927)
++|++++.+|-.-...+..+.+.+|++..
T Consensus 361 ~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 361 GHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred CCCccCccchhhcCCCCCEEeccCCcccC
Confidence 77777766663333355566666665543
No 380
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.48 E-value=1.2e-07 Score=110.02 Aligned_cols=98 Identities=28% Similarity=0.369 Sum_probs=47.5
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccccc
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 489 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~~ 489 (927)
+++.|+|++|.+++..| +.++++|+.|+|++|++++.+| +..+++|+.|+|++|++++..| ++.+++|+.|+|++
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~ 318 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYF 318 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCS
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcC
Confidence 45555555555554332 4555555555555555554433 4555555555555555553322 44555555555555
Q ss_pred cCCCCCCCccccCCceeeeecCC
Q 002410 490 NSFVGEIPPALLTGKVIFKYDNN 512 (927)
Q Consensus 490 N~l~g~iP~~~~~~~~~~~~~~N 512 (927)
|++++..|-.-...+..+.+.+|
T Consensus 319 n~l~~~~~~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 319 NNISDISPVSSLTKLQRLFFYNN 341 (466)
T ss_dssp SCCSCCGGGGGCTTCCEEECCSS
T ss_pred CcCCCchhhccCccCCEeECCCC
Confidence 55554433222233444444444
No 381
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.46 E-value=1.7e-07 Score=93.45 Aligned_cols=152 Identities=19% Similarity=0.096 Sum_probs=88.3
Q ss_pred EEeeccCCCCCCcccCCCCCCCCcccCCCCCCCCcccccCCceeeeeecccccCCCCCCChhhhhccceecCCceEEEee
Q 002410 189 AARVNFGALTKDALRYPDDPYDRIWDSDLDRRPNFVVGAASGTVRINTTKNIETRTREYPPVKVMQTAVVGTEGVLSYRL 268 (927)
Q Consensus 189 ~~r~~~g~~~~~~~~~~~d~~dR~W~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~pP~~v~qtA~~~~~~~~~~~~ 268 (927)
.-|+|+|+.. +. |..+|.|+++...... +..+.+ ...+.....+.+|..|+|||-... .++++..
T Consensus 7 ~~~INcGg~~---~~---d~~gr~w~~D~~~~~~---g~~~~~-----~~~~~~~~~~~~~~~lY~TaR~~~-~~~tY~f 71 (174)
T 2jwp_A 7 IWAVNAGGES---HV---DVHGIHYRKDPLEGRV---GRASDY-----GMKLPILRSNPEDQVLYQTERYNE-DSFGYDI 71 (174)
T ss_dssp EEEEEETSSS---EE---ETTTEEECSSCSSTTC---CCCCCC-----CTTSCCSSSCHHHHHTTTCCCCCC-SCEEEEE
T ss_pred EEEEECCCCC---cc---CCCCCEEcCCcCcccC---Cccccc-----ccceEecccCCCCchhhhhhccCC-CCeEEEE
Confidence 4599999843 21 6789999998532111 111100 001111122446889999997753 4678887
Q ss_pred cCCCCCccceEEEecccccccCCCcceeEeeecCcccccCCceeeeeecCCCceeeecccccee------------eeee
Q 002410 269 NLEDFPANARAFAYFAEIQDLGPSETRKFKLEQPYFADYSNAVVNIAENANGSYTLYEPSYMNV------------TLNF 336 (927)
Q Consensus 269 ~~~~~~~~~~~~lyFae~~~~~~~~~R~F~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 336 (927)
+.. .+-.|.+-|||+|+.. +..+.|.|||+++...- ...+++...+++...++.--..++ +..+
T Consensus 72 ~v~-~~G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~--l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g 147 (174)
T 2jwp_A 72 PIK-EEGEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTV--VKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTG 147 (174)
T ss_dssp ECC-SCEEEEEEEEEECCSC-CCSSSSCEEEEETTEEE--EEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCS
T ss_pred EeC-CCeEEEEEEEEecccc-CCCCCeEeEEEECCEEe--ecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCC
Confidence 753 2346777799999974 45789999996554322 234555443332111111000111 2356
Q ss_pred EEEEEeeecCCCCccchhhhhhhhh
Q 002410 337 VLSFSFVKTRDSTLGPLLNAIEISK 361 (927)
Q Consensus 337 ~~~~~~~~~~~s~l~p~~~~~e~~~ 361 (927)
.+.+++.|. ..-.|+|||+||+.
T Consensus 148 ~L~I~f~p~--~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 148 KLSVEFVKG--YYDNPKVCALFIMK 170 (174)
T ss_dssp EEEEEEECS--SSCSSSEEEEEEES
T ss_pred eEEEEEecc--CCCCcEEEEEEEEe
Confidence 788888874 34579999999964
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.45 E-value=2e-07 Score=107.84 Aligned_cols=56 Identities=23% Similarity=0.214 Sum_probs=23.0
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccC
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTG 470 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g 470 (927)
+++.|+|++|++++. .++++++|+.|+|++|+|++ +| +..+++|+.|+|++|+|+|
T Consensus 192 ~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 192 LLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp TCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSC
T ss_pred CCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCC
Confidence 344444444444432 23444444444444444444 22 3444444444444444443
No 383
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.45 E-value=2.4e-07 Score=107.17 Aligned_cols=95 Identities=25% Similarity=0.262 Sum_probs=50.9
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 488 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~ 488 (927)
++++.|+|++|++++ +| ++++++|++|+|++|+|++. | ++++++|++|+|++|++++ +| ++.+++|+.|+++
T Consensus 64 ~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 64 TGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 455555555555554 23 55555555556655555553 2 5555566666666666554 33 5555666666666
Q ss_pred ccCCCCCCCccccCCceeeeecCC
Q 002410 489 NNSFVGEIPPALLTGKVIFKYDNN 512 (927)
Q Consensus 489 ~N~l~g~iP~~~~~~~~~~~~~~N 512 (927)
+|++++ +|-.-...+..+.+.+|
T Consensus 136 ~N~l~~-l~l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 136 RNTLTE-IDVSHNTQLTELDCHLN 158 (457)
T ss_dssp TSCCSC-CCCTTCTTCCEEECTTC
T ss_pred CCccce-eccccCCcCCEEECCCC
Confidence 666653 34222234444555554
No 384
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.41 E-value=1.9e-07 Score=103.47 Aligned_cols=104 Identities=18% Similarity=0.292 Sum_probs=85.1
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++++.|+|++|++++. |. +..+++|+.|+|++|.+++. +.+..+++|+.|+|++|++++ + ..+..+++|+.|++
T Consensus 220 ~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFL 294 (347)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEEC
Confidence 46899999999999854 44 88999999999999999884 678899999999999999985 4 45888999999999
Q ss_pred cccCCCCCCCccccC--CceeeeecCCCCCc
Q 002410 488 ENNSFVGEIPPALLT--GKVIFKYDNNPKLH 516 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~--~~~~~~~~~N~~~c 516 (927)
++|.+++..|..+.. .+..+.+.+|+...
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 999998766665543 66778888887543
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.40 E-value=4.3e-07 Score=104.95 Aligned_cols=97 Identities=30% Similarity=0.403 Sum_probs=76.9
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 488 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~ 488 (927)
++++.|+|++|++++ +| +|+++++|++|+|++|++++ +|.. ..+|+.|+|++|++++ +| .++++++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 579999999999996 88 69999999999999999987 4442 2489999999999986 77 58899999999999
Q ss_pred ccCCCCCCCccccCCceeeeecCCCC
Q 002410 489 NNSFVGEIPPALLTGKVIFKYDNNPK 514 (927)
Q Consensus 489 ~N~l~g~iP~~~~~~~~~~~~~~N~~ 514 (927)
+|++++ +|... ..+..+.+.+|..
T Consensus 204 ~N~l~~-l~~~~-~~L~~L~l~~n~l 227 (454)
T 1jl5_A 204 NNSLKK-LPDLP-LSLESIVAGNNIL 227 (454)
T ss_dssp SSCCSS-CCCCC-TTCCEEECCSSCC
T ss_pred CCcCCc-CCCCc-CcccEEECcCCcC
Confidence 999984 66533 3556666666643
No 386
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.39 E-value=9e-07 Score=97.26 Aligned_cols=134 Identities=17% Similarity=0.217 Sum_probs=99.4
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCC----CceeeeeeeeecCceEEEEEEecCC
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH----RNLVPLIGYCEEEHQRILVYEYMHN 685 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~H----pnIv~l~~~~~~~~~~~LV~E~~~~ 685 (927)
.+.++.|....||+. |+.+++|+.... .....+.+|.++|+.+.+ ..+.++++. +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 467899999999998 677889976432 224568899999998865 223444444 456899999999
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 002410 686 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC----------------------------------------- 724 (927)
Q Consensus 686 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~----------------------------------------- 724 (927)
.++.+... ..++..+...++.++++.|+.||+..
T Consensus 112 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 112 ERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp BCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 88864332 23566677788888888888888521
Q ss_pred -------------------CCCeEecCCCCCcccccCCCcEEEeecccccccc
Q 002410 725 -------------------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 758 (927)
Q Consensus 725 -------------------~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~ 758 (927)
...++|+|++|.||+++.+..+.|+||+.+....
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1235999999999999987667999999886543
No 387
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.39 E-value=1.9e-07 Score=107.86 Aligned_cols=85 Identities=28% Similarity=0.498 Sum_probs=45.3
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccC--CCCCcCCCc-------
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTG--SLPSYMGSL------- 479 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g--~iP~~l~~l------- 479 (927)
.+++.|+|++|++++ +|.. +++|+.|+|++|++++ +|. .+++|+.|+|++|+++| .+|.+++.|
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~ 389 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLA 389 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC---
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCcCCCChHHHHhhhhccccc
Confidence 467777777777775 6654 4677777777777775 444 46777777777777777 677777776
Q ss_pred ------cccccccccccCCCC--CCCccc
Q 002410 480 ------PNLQELHIENNSFVG--EIPPAL 500 (927)
Q Consensus 480 ------~~L~~L~l~~N~l~g--~iP~~~ 500 (927)
++|+.|++++|+++| .+|.++
T Consensus 390 ~i~~~~~~L~~L~ls~N~l~~~~~iP~sl 418 (454)
T 1jl5_A 390 EVPELPQNLKQLHVETNPLREFPDIPESV 418 (454)
T ss_dssp -----------------------------
T ss_pred ccccccCcCCEEECCCCcCCccccchhhH
Confidence 677777777777776 666554
No 388
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.34 E-value=2.1e-07 Score=111.60 Aligned_cols=84 Identities=26% Similarity=0.320 Sum_probs=54.9
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 488 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~ 488 (927)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+..++ .+++|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 456677777777764 55 445666777777777764333 5566777777777777 667667777777777777
Q ss_pred ccCCCCCCCccc
Q 002410 489 NNSFVGEIPPAL 500 (927)
Q Consensus 489 ~N~l~g~iP~~~ 500 (927)
+|.++|.+|..+
T Consensus 293 ~N~l~~~~~~~l 304 (622)
T 3g06_A 293 GNPLSERTLQAL 304 (622)
T ss_dssp SCCCCHHHHHHH
T ss_pred CCCCCCcCHHHH
Confidence 777776665543
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.32 E-value=2.2e-07 Score=103.47 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=83.8
Q ss_pred EeCCCCCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCC-cCCCcc
Q 002410 403 CSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS-YMGSLP 480 (927)
Q Consensus 403 c~~~~~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~-~l~~l~ 480 (927)
|.|+. +++++++++|+ .||..+ .++|+.|+|++|+|+..++. |.+|++|+.|+|++|++.+.+|. .|.+++
T Consensus 7 C~C~~----~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~ 79 (350)
T 4ay9_X 7 CHCSN----RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 79 (350)
T ss_dssp SEEET----TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT
T ss_pred cEeeC----CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch
Confidence 77764 35899999999 899877 36899999999999988775 99999999999999999878875 678899
Q ss_pred cccc-ccccccCCCCCCCccccC---CceeeeecCCCC
Q 002410 481 NLQE-LHIENNSFVGEIPPALLT---GKVIFKYDNNPK 514 (927)
Q Consensus 481 ~L~~-L~l~~N~l~g~iP~~~~~---~~~~~~~~~N~~ 514 (927)
+|+. +.+++|+++ .+|+..+. .+..+.+.+|..
T Consensus 80 ~l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 80 KLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp TCCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECC
T ss_pred hhhhhhcccCCccc-ccCchhhhhcccccccccccccc
Confidence 8875 667789999 56554433 556677777654
No 390
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.31 E-value=3.9e-08 Score=111.03 Aligned_cols=85 Identities=21% Similarity=0.349 Sum_probs=42.7
Q ss_pred ceEEEEecCCCCc-ccCC---ccccCCcccceecccCCCCC--C---CCC-CcCcccccceeeccccccc----CCCCCc
Q 002410 410 RITKIALSGKNLK-GEIP---PELKNMEALTELWLDGNFLT--G---PLP-DMSRLIDLRIVHLENNELT----GSLPSY 475 (927)
Q Consensus 410 ~l~~L~L~~n~l~-g~ip---~~l~~l~~L~~L~Ls~N~l~--g---~~p-~~~~l~~L~~L~Ls~N~l~----g~iP~~ 475 (927)
+|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+|+ | .+| .+..+++|+.|+|++|+++ +.+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 4555555555554 3333 34445555555555555554 2 233 3455555555555555553 344555
Q ss_pred CCCccccccccccccCCCC
Q 002410 476 MGSLPNLQELHIENNSFVG 494 (927)
Q Consensus 476 l~~l~~L~~L~l~~N~l~g 494 (927)
+..+++|+.|+|++|.+++
T Consensus 240 l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp GGGCTTCCEEECTTCCCCH
T ss_pred HccCCCcCEEECCCCCCch
Confidence 5555555555555555543
No 391
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.31 E-value=2.5e-06 Score=90.89 Aligned_cols=136 Identities=17% Similarity=0.107 Sum_probs=100.8
Q ss_pred ccccccccE-EEEEEEEC-CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCceeeeeeeeecCceEEEEEEecCCCC
Q 002410 611 KKIGKGSFG-SVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGT 687 (927)
Q Consensus 611 ~~LG~G~~G-~Vy~a~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~~~~~~LV~E~~~~gs 687 (927)
+.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556655 68988765 467799998653 34456888999999884 3346778888888899999999999988
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 002410 688 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG-------------------------------------------- 723 (927)
Q Consensus 688 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~-------------------------------------------- 723 (927)
+.+.... .......+..+++..|+.||+.
T Consensus 107 ~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 107 AFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 8776542 1223456777788888888851
Q ss_pred -----------CCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 724 -----------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 724 -----------~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
....++|||+++.||++++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012379999999999999887778999997754
No 392
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.30 E-value=7.6e-07 Score=106.68 Aligned_cols=95 Identities=26% Similarity=0.386 Sum_probs=66.5
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCCcCcccccceeecccccccCCCCCcCCCcccccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 488 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l~ 488 (927)
++++.|+|++|.++ .+|.. +++|+.|+|++|+|++. | ..+++|+.|+|++|+|+ .+|. .+++|+.|+|+
T Consensus 201 ~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~l-p--~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 201 SELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSL-P--VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVY 269 (622)
T ss_dssp TTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCC-C--CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECC
T ss_pred chhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcC-C--CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCC
Confidence 35555566666555 34432 36778888888888774 3 45577888888888888 6776 56788888888
Q ss_pred ccCCCCCCCccccC--CceeeeecCCCCC
Q 002410 489 NNSFVGEIPPALLT--GKVIFKYDNNPKL 515 (927)
Q Consensus 489 ~N~l~g~iP~~~~~--~~~~~~~~~N~~~ 515 (927)
+|+|+ .||..+.. .+..+.+.+|+..
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCC
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCC
Confidence 88888 78876654 5666777888765
No 393
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=2.4e-06 Score=92.42 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=59.9
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCC---ceeeeeeeeecCceEEEEEEecCCC
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNG 686 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hp---nIv~l~~~~~~~~~~~LV~E~~~~g 686 (927)
.+.|+.|.++.||+++..+|+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 3679999999999999999999999997543332346789999999999765 467777653 368999999998
Q ss_pred CH
Q 002410 687 TL 688 (927)
Q Consensus 687 sL 688 (927)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 394
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.29 E-value=4e-08 Score=110.92 Aligned_cols=108 Identities=16% Similarity=0.191 Sum_probs=89.7
Q ss_pred CceEEEEecCCCCc--c---cCCccccCCcccceecccCCCCC----CCCCC-cCcccccceeecccccccCC----CCC
Q 002410 409 PRITKIALSGKNLK--G---EIPPELKNMEALTELWLDGNFLT----GPLPD-MSRLIDLRIVHLENNELTGS----LPS 474 (927)
Q Consensus 409 ~~l~~L~L~~n~l~--g---~ip~~l~~l~~L~~L~Ls~N~l~----g~~p~-~~~l~~L~~L~Ls~N~l~g~----iP~ 474 (927)
++|+.|+|++|+++ | .+|..+.++++|+.|+|++|.|+ +.+|. +..+++|+.|+|++|++++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 48999999999998 4 45558899999999999999996 55664 88999999999999999876 677
Q ss_pred cC--CCccccccccccccCCCC----CCCccc---cCCceeeeecCCCCCc
Q 002410 475 YM--GSLPNLQELHIENNSFVG----EIPPAL---LTGKVIFKYDNNPKLH 516 (927)
Q Consensus 475 ~l--~~l~~L~~L~l~~N~l~g----~iP~~~---~~~~~~~~~~~N~~~c 516 (927)
.+ +.+++|+.|+|++|.+++ .+|..+ ...+..+.+.+|+...
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 77 448999999999999997 488877 3567788888887653
No 395
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.26 E-value=1.7e-06 Score=96.77 Aligned_cols=74 Identities=8% Similarity=0.126 Sum_probs=56.1
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCc--eeeeeeeeecC-ceEEEEEEecCCC
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEE-HQRILVYEYMHNG 686 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hpn--Iv~l~~~~~~~-~~~~LV~E~~~~g 686 (927)
.+.++.|....+|+... +|+.+++|+.... ..+.+|..+++.+.... +.+++.++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 35688999999999986 4788999987542 25888999999886433 45667766654 6689999999986
Q ss_pred CHH
Q 002410 687 TLR 689 (927)
Q Consensus 687 sL~ 689 (927)
++.
T Consensus 120 ~l~ 122 (362)
T 3ovc_A 120 TLQ 122 (362)
T ss_dssp ETT
T ss_pred Ccc
Confidence 553
No 396
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.24 E-value=5e-06 Score=90.70 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=96.1
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCC---ceeeeeeeee-cCceEEEEEEecCCC
Q 002410 611 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCE-EEHQRILVYEYMHNG 686 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hp---nIv~l~~~~~-~~~~~~LV~E~~~~g 686 (927)
+.++.|....||+. |+.+++|+-.. ......+.+|.++|+.+.+. .+.+++.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 56788999999988 56788888432 23456789999999999642 3556666663 455678999999998
Q ss_pred CHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 002410 687 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------- 723 (927)
Q Consensus 687 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~------------------------------------------- 723 (927)
+|.+..- ..++..+...++.++++.|+.||+.
T Consensus 99 ~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 8876322 1234555566666666666666641
Q ss_pred --------------CCCCeEecCCCCCcccccC---CCc-EEEeecccccc
Q 002410 724 --------------CNPGIIHRDVKSSNILLDI---NMR-AKVSDFGLSRQ 756 (927)
Q Consensus 724 --------------~~~~ivH~DLkp~NILld~---~~~-~kL~DFGla~~ 756 (927)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 455 48999998764
No 397
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.23 E-value=1.4e-07 Score=105.64 Aligned_cols=105 Identities=19% Similarity=0.183 Sum_probs=69.9
Q ss_pred CceEEEEecCCCCcccCC----ccccCCc-ccceecccCCCCCCCCCC-cCcc-----cccceeecccccccCCCCCcCC
Q 002410 409 PRITKIALSGKNLKGEIP----PELKNME-ALTELWLDGNFLTGPLPD-MSRL-----IDLRIVHLENNELTGSLPSYMG 477 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip----~~l~~l~-~L~~L~Ls~N~l~g~~p~-~~~l-----~~L~~L~Ls~N~l~g~iP~~l~ 477 (927)
.+++.|+|++|++++..+ ..+.+++ +|+.|+|++|+|++..+. +..+ ++|+.|+|++|++++..+..++
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 457788888888775555 5667777 788888888877777663 5444 7788888888887766666444
Q ss_pred Cc-----cccccccccccCCCCCCCcccc-------CCceeeeecCCC
Q 002410 478 SL-----PNLQELHIENNSFVGEIPPALL-------TGKVIFKYDNNP 513 (927)
Q Consensus 478 ~l-----~~L~~L~l~~N~l~g~iP~~~~-------~~~~~~~~~~N~ 513 (927)
.. ++|+.|+|++|.+++..+..+. ..+..+.+++|.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 43 6778888888887744443321 245556666664
No 398
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.20 E-value=1.2e-07 Score=104.56 Aligned_cols=104 Identities=12% Similarity=0.078 Sum_probs=73.8
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCC-CCC-cCcccccceeecccccccCCCCCcCCCcccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP-LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~-~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++++.|+|++|.+.+.++. +.++++|+.|+|++|.+++. +|. +..+++|+.|+|++|++++.+|..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5677888888888766554 56778888888888887765 554 67788888888888888777777777788888888
Q ss_pred cccc-CCCCC-CCcccc--CCceeeeecCCC
Q 002410 487 IENN-SFVGE-IPPALL--TGKVIFKYDNNP 513 (927)
Q Consensus 487 l~~N-~l~g~-iP~~~~--~~~~~~~~~~N~ 513 (927)
|++| .+++. +|..+. ..+..+.+.+|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCT
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC
Confidence 8888 56642 444332 255566666663
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.20 E-value=4.5e-07 Score=96.53 Aligned_cols=77 Identities=22% Similarity=0.378 Sum_probs=40.8
Q ss_pred CceEEEEecCCCCcc--cCCccccCCcccceecccCCCCCCCCCCcCccc--ccceeecccccccCCCCC-------cCC
Q 002410 409 PRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLPDMSRLI--DLRIVHLENNELTGSLPS-------YMG 477 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g--~ip~~l~~l~~L~~L~Ls~N~l~g~~p~~~~l~--~L~~L~Ls~N~l~g~iP~-------~l~ 477 (927)
++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. .++..+. +|+.|+|++|.+++.+|. .+.
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~ 248 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRE 248 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHH
Confidence 455666666666665 4445555566666666666666554 2222222 556666666666555542 234
Q ss_pred Ccccccccc
Q 002410 478 SLPNLQELH 486 (927)
Q Consensus 478 ~l~~L~~L~ 486 (927)
.+|+|+.||
T Consensus 249 ~~P~L~~LD 257 (267)
T 3rw6_A 249 RFPKLLRLD 257 (267)
T ss_dssp HCTTCCEES
T ss_pred HCcccCeEC
Confidence 455555543
No 400
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.06 E-value=5.4e-06 Score=92.27 Aligned_cols=80 Identities=5% Similarity=0.037 Sum_probs=56.7
Q ss_pred ccc-cccccEEEEEEEEC-------CCcEEEEEEccCcc---chhHHHHHHHHHHHHhcC-C--CceeeeeeeeecC---
Q 002410 611 KKI-GKGSFGSVYYGKMK-------DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEE--- 673 (927)
Q Consensus 611 ~~L-G~G~~G~Vy~a~~~-------~g~~vAvK~l~~~~---~~~~~~~~~E~~~L~~l~-H--pnIv~l~~~~~~~--- 673 (927)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998765 26789999865432 101245778999998884 3 3567788877655
Q ss_pred ceEEEEEEecCCCCHHH
Q 002410 674 HQRILVYEYMHNGTLRD 690 (927)
Q Consensus 674 ~~~~LV~E~~~~gsL~~ 690 (927)
+..++|||+++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876643
No 401
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.05 E-value=4.7e-07 Score=99.69 Aligned_cols=112 Identities=19% Similarity=0.291 Sum_probs=93.8
Q ss_pred CCccEEEeCCCCCceEEEEecCCCCcccCCccccCC--cccceecccCCCCCCCCCCcCcccccceeecccccccCC-CC
Q 002410 397 PWEWVTCSTTTPPRITKIALSGKNLKGEIPPELKNM--EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGS-LP 473 (927)
Q Consensus 397 ~w~~~~c~~~~~~~l~~L~L~~n~l~g~ip~~l~~l--~~L~~L~Ls~N~l~g~~p~~~~l~~L~~L~Ls~N~l~g~-iP 473 (927)
.|..+.|+ +..++.|+|++|++. |..+..+ ++|+.|+|++|.+++.++.+..+++|+.|+|++|++++. +|
T Consensus 38 ~W~~~~~~---~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 38 RWYRLASD---ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp HHHHHHTC---STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHhcC---chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHH
Confidence 35544432 345789999999987 5677888 899999999999999999988999999999999999876 89
Q ss_pred CcCCCccccccccccccCCCCCCCccccC--CceeeeecCCCC
Q 002410 474 SYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNPK 514 (927)
Q Consensus 474 ~~l~~l~~L~~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~~ 514 (927)
..+..+++|+.|+|++|.+++.+|..+.. .+..+.+.+|..
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~ 154 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSG 154 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBS
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCC
Confidence 89999999999999999999877776644 566777777743
No 402
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.03 E-value=4.8e-07 Score=101.15 Aligned_cols=102 Identities=14% Similarity=0.043 Sum_probs=86.6
Q ss_pred EEEecCCCCcccCCccccCCcccceecccCCCCCCCCC----C-cCccc-ccceeecccccccCCCCCcCCCc-----cc
Q 002410 413 KIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP----D-MSRLI-DLRIVHLENNELTGSLPSYMGSL-----PN 481 (927)
Q Consensus 413 ~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p----~-~~~l~-~L~~L~Ls~N~l~g~iP~~l~~l-----~~ 481 (927)
.++|++|+++|.+|..+...++|+.|+|++|+|++..+ + +..++ +|+.|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999999988888899999999999999886 3 77888 89999999999998888888776 99
Q ss_pred cccccccccCCCCCCCcccc-------CCceeeeecCCCC
Q 002410 482 LQELHIENNSFVGEIPPALL-------TGKVIFKYDNNPK 514 (927)
Q Consensus 482 L~~L~l~~N~l~g~iP~~~~-------~~~~~~~~~~N~~ 514 (927)
|+.|+|++|.+++..+..+. ..+..+.+.+|..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 121 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDF 121 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcC
Confidence 99999999999976665432 3466677777763
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=97.99 E-value=6.9e-07 Score=95.11 Aligned_cols=83 Identities=22% Similarity=0.298 Sum_probs=63.6
Q ss_pred EEecCCCCc---ccCCccccCCcccceecccCCCCCCC--CCC-cCcccccceeecccccccCCCCCcCCCcc--ccccc
Q 002410 414 IALSGKNLK---GEIPPELKNMEALTELWLDGNFLTGP--LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLP--NLQEL 485 (927)
Q Consensus 414 L~L~~n~l~---g~ip~~l~~l~~L~~L~Ls~N~l~g~--~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~--~L~~L 485 (927)
++++.|... +.++-...+|++|+.|+|++|+|++. +|+ +..+++|+.|+|++|+|++. ..+..+. +|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 556666432 22222335788999999999999994 455 67999999999999999965 4455555 89999
Q ss_pred cccccCCCCCCCc
Q 002410 486 HIENNSFVGEIPP 498 (927)
Q Consensus 486 ~l~~N~l~g~iP~ 498 (927)
+|++|.+++.+|.
T Consensus 226 ~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 226 WLDGNSLCDTFRD 238 (267)
T ss_dssp ECTTSTTGGGCSS
T ss_pred EccCCcCccccCc
Confidence 9999999988773
No 404
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.71 E-value=7.4e-05 Score=84.41 Aligned_cols=75 Identities=15% Similarity=0.187 Sum_probs=49.6
Q ss_pred cccccccccEEEEEEEEC-CCcEEEEEEccCccc-------hhHHHHHHHHHHHHhcCC--Cc-eeeeeeeeecCceEEE
Q 002410 610 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------HRTQQFVTEVALLSRIHH--RN-LVPLIGYCEEEHQRIL 678 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~-~g~~vAvK~l~~~~~-------~~~~~~~~E~~~L~~l~H--pn-Iv~l~~~~~~~~~~~L 678 (927)
.+.||.|..+.||++... +++.++||....... ....++..|.++|+.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357999999999999765 468899998653221 123456789999988742 33 3455544 2344689
Q ss_pred EEEecCCC
Q 002410 679 VYEYMHNG 686 (927)
Q Consensus 679 V~E~~~~g 686 (927)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 405
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.71 E-value=9.2e-05 Score=81.32 Aligned_cols=140 Identities=16% Similarity=0.232 Sum_probs=80.4
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCC--Cceeeeee------eeecCceEEEEEEe
Q 002410 611 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--RNLVPLIG------YCEEEHQRILVYEY 682 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~H--pnIv~l~~------~~~~~~~~~LV~E~ 682 (927)
+.|+.|..+.||+....+| .+++|+.... ...+..|..+++.|.. -.+.+++. +....+..++++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677889999988755 4899988752 2334455666665531 12333333 12345678999999
Q ss_pred cCCCCHH--------------HHhccCCC----C-------CCCCHHHH-------------------------------
Q 002410 683 MHNGTLR--------------DRLHGSVN----Q-------KPLDWLTR------------------------------- 706 (927)
Q Consensus 683 ~~~gsL~--------------~~L~~~~~----~-------~~l~~~~~------------------------------- 706 (927)
++|..+. ..++.... . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986532 11111100 0 00122110
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCcccccCCCcEEEeeccccc
Q 002410 707 LQIAHDAAKGLEYLHT----------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 707 ~~i~~qia~gL~~LH~----------~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
..+..++..++++|++ .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111224445666652 124789999999999999888899999999764
No 406
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.70 E-value=8.4e-07 Score=102.21 Aligned_cols=105 Identities=19% Similarity=0.173 Sum_probs=65.6
Q ss_pred CceEEEEecCCCCccc----CCccccCCcccceecccCCCCCCCCCC-cC-----cccccceeecccccccCC----CCC
Q 002410 409 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPLPD-MS-----RLIDLRIVHLENNELTGS----LPS 474 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~-----~l~~L~~L~Ls~N~l~g~----iP~ 474 (927)
++++.|+|++|++++. ++..+.++++|+.|+|++|.+++..+. +. ..++|+.|+|++|++++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4677777777777754 566666777777777777776554332 22 235777777777777754 455
Q ss_pred cCCCccccccccccccCCCCCCCcccc-------CCceeeeecCCC
Q 002410 475 YMGSLPNLQELHIENNSFVGEIPPALL-------TGKVIFKYDNNP 513 (927)
Q Consensus 475 ~l~~l~~L~~L~l~~N~l~g~iP~~~~-------~~~~~~~~~~N~ 513 (927)
.+..+++|+.|+|++|.+++..+..+. ..+..+.+.+|.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 666667777777777777644333332 144455555553
No 407
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.64 E-value=2.1e-06 Score=98.91 Aligned_cols=106 Identities=18% Similarity=0.210 Sum_probs=63.1
Q ss_pred CceEEEEecCCCCcccCCccccCC-----cccceecccCCCCCCC----CCC-cCcccccceeecccccccCCCCCcCCC
Q 002410 409 PRITKIALSGKNLKGEIPPELKNM-----EALTELWLDGNFLTGP----LPD-MSRLIDLRIVHLENNELTGSLPSYMGS 478 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l-----~~L~~L~Ls~N~l~g~----~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~ 478 (927)
++++.|+|++|.+.+..+..+... ++|+.|+|++|.+++. ++. +..+++|+.|+|++|++++..+..+..
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 457777777777765444444332 5677777777776654 232 556677777777777766544443332
Q ss_pred -----ccccccccccccCCCC----CCCcccc--CCceeeeecCCCC
Q 002410 479 -----LPNLQELHIENNSFVG----EIPPALL--TGKVIFKYDNNPK 514 (927)
Q Consensus 479 -----l~~L~~L~l~~N~l~g----~iP~~~~--~~~~~~~~~~N~~ 514 (927)
+++|+.|+|++|.+++ .+|..+. ..+..+.+.+|+.
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 4567777777777764 5555443 2455566666653
No 408
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=3.9e-05 Score=84.35 Aligned_cols=91 Identities=15% Similarity=0.094 Sum_probs=77.3
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccc-eeecccccccCCCCCcCCCcccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLR-IVHLENNELTGSLPSYMGSLPNLQELH 486 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~-~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 486 (927)
++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++...+. |.++++|+ .|+|++ +++..-+..|.+|++|+.|+
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 47999999999999444457999999999999998 6665554 99999999 999999 77734457899999999999
Q ss_pred ccccCCCCCCCccccC
Q 002410 487 IENNSFVGEIPPALLT 502 (927)
Q Consensus 487 l~~N~l~g~iP~~~~~ 502 (927)
+++|+++ .|+...+.
T Consensus 304 l~~n~i~-~I~~~aF~ 318 (329)
T 3sb4_A 304 ATGDKIT-TLGDELFG 318 (329)
T ss_dssp ECSSCCC-EECTTTTC
T ss_pred eCCCccC-ccchhhhc
Confidence 9999999 88877665
No 409
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.53 E-value=0.00034 Score=76.26 Aligned_cols=137 Identities=18% Similarity=0.219 Sum_probs=91.2
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcC---CCceeeeeeeeecCceEEEEEEecCCCC
Q 002410 611 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQRILVYEYMHNGT 687 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~---HpnIv~l~~~~~~~~~~~LV~E~~~~gs 687 (927)
+.|+.|....+|+.... ++.+++|+.... ....+..|.+.|+.|. ...+.++++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 46899999999999864 678899987532 3567889999999884 3568888888887888999999999876
Q ss_pred HH--------H---HhccCCC-C------------------CCCCHHHHH---HHH----------------HHHHHHH-
Q 002410 688 LR--------D---RLHGSVN-Q------------------KPLDWLTRL---QIA----------------HDAAKGL- 717 (927)
Q Consensus 688 L~--------~---~L~~~~~-~------------------~~l~~~~~~---~i~----------------~qia~gL- 717 (927)
+. . .|+.... . -.-+|.... ++. .+++..+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 41 1 2222111 0 012343221 111 1122222
Q ss_pred HHHHh-cCCCCeEecCCCCCcccccCCCcEEEeecc
Q 002410 718 EYLHT-GCNPGIIHRDVKSSNILLDINMRAKVSDFG 752 (927)
Q Consensus 718 ~~LH~-~~~~~ivH~DLkp~NILld~~~~~kL~DFG 752 (927)
..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1246899999999999999887 8899974
No 410
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.52 E-value=0.0001 Score=84.01 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=49.1
Q ss_pred CCCeEecCCCCCcccccCCCcEEEeeccccccccccccccccccccCCCccCCCccCCC---CCCcchhHHHHHHHHHHH
Q 002410 725 NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ---QLTEKSDVYSFGVVLLEL 801 (927)
Q Consensus 725 ~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~~s~ksDVwSlGvlL~eL 801 (927)
...++|||+++.|||++.++ ++|+||+.+........-......-...|++|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 47899999999999998776 99999998876432211110000011345666554311 112345566788888887
Q ss_pred HhC
Q 002410 802 ISG 804 (927)
Q Consensus 802 ltG 804 (927)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 411
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.51 E-value=0.00023 Score=76.48 Aligned_cols=74 Identities=19% Similarity=0.275 Sum_probs=54.9
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCC---ceeeeeeeeecCceEEEEEEecCCC
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNG 686 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hp---nIv~l~~~~~~~~~~~LV~E~~~~g 686 (927)
.+.+|.|..+.||+.++.||+.|++|+-..........|..|++.|+.|... -+.+++++. ..++||||++++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~ 95 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeeccc
Confidence 3678999999999999999999999987654433445688899999988421 234444432 247899999876
Q ss_pred C
Q 002410 687 T 687 (927)
Q Consensus 687 s 687 (927)
.
T Consensus 96 ~ 96 (288)
T 3f7w_A 96 P 96 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 412
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.38 E-value=8.6e-06 Score=91.43 Aligned_cols=84 Identities=23% Similarity=0.216 Sum_probs=40.2
Q ss_pred ceEEEEecCCCCcc----cCCccccCCcccceecccCCCCCCCC----C-CcCcccccceeecccccccCC----CCCcC
Q 002410 410 RITKIALSGKNLKG----EIPPELKNMEALTELWLDGNFLTGPL----P-DMSRLIDLRIVHLENNELTGS----LPSYM 476 (927)
Q Consensus 410 ~l~~L~L~~n~l~g----~ip~~l~~l~~L~~L~Ls~N~l~g~~----p-~~~~l~~L~~L~Ls~N~l~g~----iP~~l 476 (927)
.|+.|+|++|+|+. .++..+..+++|++|+|++|+|+..- + .+..+++|+.|+|++|+++.. ++..+
T Consensus 156 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L 235 (372)
T 3un9_A 156 QITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAA 235 (372)
T ss_dssp CCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHH
T ss_pred ccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHH
Confidence 45555555555543 13333445555555555555554321 1 134444555555555555421 22233
Q ss_pred CCccccccccccccCCC
Q 002410 477 GSLPNLQELHIENNSFV 493 (927)
Q Consensus 477 ~~l~~L~~L~l~~N~l~ 493 (927)
..+++|+.|+|++|.|+
T Consensus 236 ~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 236 REHPSLELLHLYFNELS 252 (372)
T ss_dssp HHCSSCCEEECTTSSCC
T ss_pred HhCCCCCEEeccCCCCC
Confidence 33455555555555554
No 413
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.34 E-value=8.7e-06 Score=91.37 Aligned_cols=61 Identities=25% Similarity=0.239 Sum_probs=27.5
Q ss_pred cccceecccCCCCCCC----CC-CcCcccccceeecccccccCC----CCCcCCCccccccccccccCCC
Q 002410 433 EALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGS----LPSYMGSLPNLQELHIENNSFV 493 (927)
Q Consensus 433 ~~L~~L~Ls~N~l~g~----~p-~~~~l~~L~~L~Ls~N~l~g~----iP~~l~~l~~L~~L~l~~N~l~ 493 (927)
++|+.|+|++|.|+.. ++ .+..+++|+.|+|++|+|+.. ++..+..+++|+.|+|++|.|+
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 4455555555544331 11 123444555555555554421 2333444445555555555554
No 414
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.01 E-value=0.0028 Score=69.38 Aligned_cols=142 Identities=12% Similarity=0.070 Sum_probs=74.5
Q ss_pred ccccccccEE-EEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCC--CceeeeeeeeecCceEEEEEEecCCCC
Q 002410 611 KKIGKGSFGS-VYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYEYMHNGT 687 (927)
Q Consensus 611 ~~LG~G~~G~-Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~H--pnIv~l~~~~~~~~~~~LV~E~~~~gs 687 (927)
+.|+.|.... +|+....+|+.+++|....... ..+..|+.+++.+.. -.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665555 6677654477788886543211 234456777776642 23455666544433 78999997766
Q ss_pred HHHHhccC---------------------CCC--CCCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 002410 688 LRDRLHGS---------------------VNQ--KPLDWLTRL-------Q-------------IAHDAAKGLEYLH--- 721 (927)
Q Consensus 688 L~~~L~~~---------------------~~~--~~l~~~~~~-------~-------------i~~qia~gL~~LH--- 721 (927)
+.+.+... ... ..++..... . ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65443211 000 111111100 0 0011112222221
Q ss_pred hcCCCCeEecCCCCCcccccCC----CcEEEeeccccccc
Q 002410 722 TGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 757 (927)
Q Consensus 722 ~~~~~~ivH~DLkp~NILld~~----~~~kL~DFGla~~~ 757 (927)
......++|||+++.||+++.+ +.+.|+||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1124689999999999999874 68999999988653
No 415
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.01 E-value=0.00037 Score=76.47 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=19.8
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCC
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT 446 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~ 446 (927)
.+|+.|+|.+ +++..-+..|.+|++|+.|+|++|.++
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc
Confidence 3455666665 555333334566666666666666554
No 416
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.97 E-value=0.0013 Score=75.10 Aligned_cols=71 Identities=15% Similarity=0.309 Sum_probs=49.8
Q ss_pred ccccccccEEEEEEEECC--------CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCce-eeeeeeeecCceEEEEEE
Q 002410 611 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnI-v~l~~~~~~~~~~~LV~E 681 (927)
+.|+.|....+|++...+ ++.+++|+...... ...+.+|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 567888899999998763 57899998854211 1455679999998853333 566666543 28999
Q ss_pred ecCCCC
Q 002410 682 YMHNGT 687 (927)
Q Consensus 682 ~~~~gs 687 (927)
|++|.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 998644
No 417
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.93 E-value=5.7e-05 Score=89.76 Aligned_cols=105 Identities=15% Similarity=0.093 Sum_probs=52.4
Q ss_pred CceEEEEec----CCCCccc-----CCccccCCcccceecccCC--CCCCCCCC-c-CcccccceeecccccccC-CCCC
Q 002410 409 PRITKIALS----GKNLKGE-----IPPELKNMEALTELWLDGN--FLTGPLPD-M-SRLIDLRIVHLENNELTG-SLPS 474 (927)
Q Consensus 409 ~~l~~L~L~----~n~l~g~-----ip~~l~~l~~L~~L~Ls~N--~l~g~~p~-~-~~l~~L~~L~Ls~N~l~g-~iP~ 474 (927)
++++.|+|+ .|.+++. ++..+.++++|+.|+|+++ .+++..+. + ..+++|+.|+|++|++++ .++.
T Consensus 403 ~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 482 (592)
T 3ogk_B 403 KNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME 482 (592)
T ss_dssp CSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH
T ss_pred CCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH
Confidence 356666664 4555542 3333555666666666532 24443332 2 235556666666666654 2344
Q ss_pred cCCCccccccccccccCCCCCCCccc---cCCceeeeecCCC
Q 002410 475 YMGSLPNLQELHIENNSFVGEIPPAL---LTGKVIFKYDNNP 513 (927)
Q Consensus 475 ~l~~l~~L~~L~l~~N~l~g~iP~~~---~~~~~~~~~~~N~ 513 (927)
.+..+++|+.|+|++|.+++.....+ ...+..+.+.+|.
T Consensus 483 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 483 FSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 44555666666666666543322221 2244455555554
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.91 E-value=7.1e-05 Score=75.11 Aligned_cols=85 Identities=21% Similarity=0.289 Sum_probs=65.5
Q ss_pred CceEEEEecCC-CCccc----CCccccCCcccceecccCCCCCCCC----C-CcCcccccceeecccccccCC----CCC
Q 002410 409 PRITKIALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGPL----P-DMSRLIDLRIVHLENNELTGS----LPS 474 (927)
Q Consensus 409 ~~l~~L~L~~n-~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~~----p-~~~~l~~L~~L~Ls~N~l~g~----iP~ 474 (927)
+.+++|+|++| ++... +...+...+.|++|+|++|+|+..- . .+...+.|+.|+|++|+++.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 47899999998 87643 4556777889999999999986531 1 255667899999999998743 456
Q ss_pred cCCCccccccccc--cccCCC
Q 002410 475 YMGSLPNLQELHI--ENNSFV 493 (927)
Q Consensus 475 ~l~~l~~L~~L~l--~~N~l~ 493 (927)
.+...++|+.|+| ++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCC
T ss_pred HHHhCCCceEEEecCCCCCCC
Confidence 6777788999999 778887
No 419
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.91 E-value=0.0015 Score=70.47 Aligned_cols=139 Identities=15% Similarity=0.134 Sum_probs=75.5
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCce-eeeeeeeecCceEEEEEEec-CCCC
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYM-HNGT 687 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnI-v~l~~~~~~~~~~~LV~E~~-~~gs 687 (927)
.+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .++++++. +.-++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 467888999999998 55888887643211 1123568888887743233 45555443 3347899999 5544
Q ss_pred HHH------------------HhccCCCC--CCCC-HHHHHHHHH--------------HHHHHHH----HHHh-cCCCC
Q 002410 688 LRD------------------RLHGSVNQ--KPLD-WLTRLQIAH--------------DAAKGLE----YLHT-GCNPG 727 (927)
Q Consensus 688 L~~------------------~L~~~~~~--~~l~-~~~~~~i~~--------------qia~gL~----~LH~-~~~~~ 727 (927)
+.. .+|..... .... +..+..+.. .+.+.+. .|.. .....
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 321 11111000 0001 111111110 0111111 1111 12355
Q ss_pred eEecCCCCCcccccCCCcEEEeeccccccc
Q 002410 728 IIHRDVKSSNILLDINMRAKVSDFGLSRQA 757 (927)
Q Consensus 728 ivH~DLkp~NILld~~~~~kL~DFGla~~~ 757 (927)
++|+|+.+.||+ ..++.+.|+||..+...
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 899999999999 56778899999987653
No 420
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.86 E-value=0.0049 Score=66.94 Aligned_cols=143 Identities=15% Similarity=0.222 Sum_probs=80.8
Q ss_pred ccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCc--eeeeeee------eecCceEEEEEEe
Q 002410 611 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY------CEEEHQRILVYEY 682 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hpn--Iv~l~~~------~~~~~~~~LV~E~ 682 (927)
+.|+.|....+|+....+| .+++|+.... .....+..|+.+++.+.... +.+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577788899999988766 6889988652 12234566888877774222 2333321 1223567899999
Q ss_pred cCCCCHHH--------------HhccCC---CCC---CC---CHHHHHH------------HHHHHHHHHHHHHhc----
Q 002410 683 MHNGTLRD--------------RLHGSV---NQK---PL---DWLTRLQ------------IAHDAAKGLEYLHTG---- 723 (927)
Q Consensus 683 ~~~gsL~~--------------~L~~~~---~~~---~l---~~~~~~~------------i~~qia~gL~~LH~~---- 723 (927)
++|..+.. .++... ... .. .|..... +...+.+.++.+++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 99865311 111110 000 01 1221100 011244455555531
Q ss_pred CCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 724 CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 724 ~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
...+++|+|+++.||+++.+..+.|+||+.+..
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 235799999999999998876668999997653
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.82 E-value=0.0058 Score=66.58 Aligned_cols=141 Identities=11% Similarity=0.162 Sum_probs=81.6
Q ss_pred cccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCc--eeeeeee-----eecCceEEEEEEecC
Q 002410 612 KIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY-----CEEEHQRILVYEYMH 684 (927)
Q Consensus 612 ~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hpn--Iv~l~~~-----~~~~~~~~LV~E~~~ 684 (927)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.+++.. ....+..++++|+++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 77889999888778889999986331 12356677888888774222 3444443 122456688999998
Q ss_pred CCCHH-----H------H---hcc----CC--CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc--
Q 002410 685 NGTLR-----D------R---LHG----SV--NQKPLDWLTR----LQI---------------AHDAAKGLEYLHTG-- 723 (927)
Q Consensus 685 ~gsL~-----~------~---L~~----~~--~~~~l~~~~~----~~i---------------~~qia~gL~~LH~~-- 723 (927)
|..+. . . ++. .. .....++... ..+ ...+...++.+.+.
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75431 0 0 111 00 0111222111 000 11111222333221
Q ss_pred --CCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 724 --CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 724 --~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
....++|||+++.||+++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 236789999999999998 4 899999987754
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.73 E-value=7.7e-05 Score=74.85 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=67.5
Q ss_pred CceEEEEecCCCCccc----CCccccCCcccceecccCCCCCCC----CC-CcCcccccceeec--ccccccCC----CC
Q 002410 409 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHL--ENNELTGS----LP 473 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~----~p-~~~~l~~L~~L~L--s~N~l~g~----iP 473 (927)
+.|+.|+|++|+|... +...+...+.|++|+|++|+|+.. +. .+...+.|+.|+| ++|.++.. +.
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 5799999999999753 445566678999999999999864 22 4777889999999 88998743 34
Q ss_pred CcCCCccccccccccccCCC
Q 002410 474 SYMGSLPNLQELHIENNSFV 493 (927)
Q Consensus 474 ~~l~~l~~L~~L~l~~N~l~ 493 (927)
..+...++|+.|+|++|.+.
T Consensus 145 ~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 145 NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeccCCCCC
Confidence 45556689999999999875
No 423
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.68 E-value=0.0037 Score=69.91 Aligned_cols=141 Identities=17% Similarity=0.186 Sum_probs=84.6
Q ss_pred ccccccccEEEEEEEEC--------CCcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCceeeeeeeeecCceEEEEEE
Q 002410 611 KKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~--------~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~~~~~~LV~E 681 (927)
+.|..|....+|+.... +++.+++|+.... ......+.+|.++++.+. +.-..++++.+.+ .+|+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888889999875 2578999986432 223456678999998884 3333566766654 29999
Q ss_pred ecCCCCHHH-----------------HhccCC--CCCCC--CHHHHHHHHHHHHH-------------------HHHHHH
Q 002410 682 YMHNGTLRD-----------------RLHGSV--NQKPL--DWLTRLQIAHDAAK-------------------GLEYLH 721 (927)
Q Consensus 682 ~~~~gsL~~-----------------~L~~~~--~~~~l--~~~~~~~i~~qia~-------------------gL~~LH 721 (927)
|++|..|.. .|+... ..+.. -+.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999865421 111110 11122 24555555544422 223332
Q ss_pred h-----cCCCCeEecCCCCCcccccCC----CcEEEeecccccc
Q 002410 722 T-----GCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQ 756 (927)
Q Consensus 722 ~-----~~~~~ivH~DLkp~NILld~~----~~~kL~DFGla~~ 756 (927)
+ .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 123578999999999999876 7899999998754
No 424
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.56 E-value=0.002 Score=60.57 Aligned_cols=55 Identities=31% Similarity=0.408 Sum_probs=39.8
Q ss_pred EEEecCCCCc-ccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeeccccccc
Q 002410 413 KIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELT 469 (927)
Q Consensus 413 ~L~L~~n~l~-g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~ 469 (927)
.++.++++|+ ..+|..|. ++|+.|+|++|+|+...+. |..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 7888888886 46775433 3577888888888777665 677777777777777654
No 425
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.49 E-value=0.0041 Score=69.21 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=44.6
Q ss_pred ccccccccEEEEEEEECC---------CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCc-eeeeeeeeecCceEEEEE
Q 002410 611 KKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN-LVPLIGYCEEEHQRILVY 680 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~---------g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~Hpn-Iv~l~~~~~~~~~~~LV~ 680 (927)
+.|+.|....+|+....+ ++.+++|+....... ......|.++++.+...+ ..++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 567888888999998764 268999987643221 112357888888885333 345665442 26899
Q ss_pred EecCCCC
Q 002410 681 EYMHNGT 687 (927)
Q Consensus 681 E~~~~gs 687 (927)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 426
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.47 E-value=0.00028 Score=83.71 Aligned_cols=102 Identities=12% Similarity=0.157 Sum_probs=69.8
Q ss_pred CceEEEEecCCCCcccCCcccc-CCcccceecccCC-CCCCC-CCC-cCcccccceeecccccccCCCCCcCC----Ccc
Q 002410 409 PRITKIALSGKNLKGEIPPELK-NMEALTELWLDGN-FLTGP-LPD-MSRLIDLRIVHLENNELTGSLPSYMG----SLP 480 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~-~l~~L~~L~Ls~N-~l~g~-~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~----~l~ 480 (927)
++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++. +.++++|+.|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788888888888877777775 6888888888888 55442 344 34788888888888888765544443 566
Q ss_pred ccccccccccCCCCCCCccc-------cCCceeeeecCC
Q 002410 481 NLQELHIENNSFVGEIPPAL-------LTGKVIFKYDNN 512 (927)
Q Consensus 481 ~L~~L~l~~N~l~g~iP~~~-------~~~~~~~~~~~N 512 (927)
+|+.|++++|. +.++... ...+..+.+.+|
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 88888888886 2333221 134556666655
No 427
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.45 E-value=0.00074 Score=80.06 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=38.0
Q ss_pred ceEEEEecCCCCccc----CCccccCCcccceecccCCCCCCCCC----C-cCcccccceeecccccccCCCCCcCCCcc
Q 002410 410 RITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPLP----D-MSRLIDLRIVHLENNELTGSLPSYMGSLP 480 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~~p----~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~ 480 (927)
+|+.|+|++|.+++. ++..+.++++|+.|+|++|.+++..+ . +.++++|+.|+|++|.+.+ +|..+.+++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 455555555555443 33334445555555555555553221 1 3445555555555555553 444444444
Q ss_pred cccccccc
Q 002410 481 NLQELHIE 488 (927)
Q Consensus 481 ~L~~L~l~ 488 (927)
+|+.|+++
T Consensus 244 ~L~~L~l~ 251 (592)
T 3ogk_B 244 NLEEFCGG 251 (592)
T ss_dssp TCCEEEEC
T ss_pred HHHhhccc
Confidence 44444444
No 428
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.43 E-value=0.0094 Score=68.38 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=48.0
Q ss_pred ccccccccEEEEEEEECC-CcEEEEEEccCccchhHHHHHHHHHHHHhcCCCce-eeeeeeeecCceEEEEEEecCCCCH
Q 002410 611 KKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYMHNGTL 688 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnI-v~l~~~~~~~~~~~LV~E~~~~gsL 688 (927)
+.|+.|....+|+....+ ++.+++|+........ -...+|..+++.|...++ .++++.+.. .+|+||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 568889999999999875 5788999875432111 112579999998864444 567776632 259999987543
No 429
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.34 E-value=0.013 Score=64.47 Aligned_cols=68 Identities=13% Similarity=0.244 Sum_probs=44.6
Q ss_pred cccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcC---CCceeeeeee------eecCceEEEEEEecC
Q 002410 614 GKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGY------CEEEHQRILVYEYMH 684 (927)
Q Consensus 614 G~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~---HpnIv~l~~~------~~~~~~~~LV~E~~~ 684 (927)
|.|....||+....+| .+++|+...... ..|+.+++.|. -|.+.+++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444689999988777 899998765432 35666666663 1224454432 233567899999999
Q ss_pred CCCH
Q 002410 685 NGTL 688 (927)
Q Consensus 685 ~gsL 688 (927)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8755
No 430
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.27 E-value=0.00022 Score=84.59 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=69.3
Q ss_pred CceEEEEec--C----CCCcc-----cCCccccCCcccceecccCCCCCCCCC-CcCc-ccccceeecccccccCCCCCc
Q 002410 409 PRITKIALS--G----KNLKG-----EIPPELKNMEALTELWLDGNFLTGPLP-DMSR-LIDLRIVHLENNELTGSLPSY 475 (927)
Q Consensus 409 ~~l~~L~L~--~----n~l~g-----~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~-l~~L~~L~Ls~N~l~g~iP~~ 475 (927)
++++.|+|+ + +++++ .++.-+.++++|+.|+|++ ++++..+ .+.. +++|+.|+|++|.+++..+..
T Consensus 397 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~ 475 (594)
T 2p1m_B 397 PNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHH 475 (594)
T ss_dssp TTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHH
T ss_pred CCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHH
Confidence 578888888 3 55552 1222366778888888876 5555433 3444 788888888888887655554
Q ss_pred C-CCccccccccccccCCCCCCCcccc---CCceeeeecCCCC
Q 002410 476 M-GSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 514 (927)
Q Consensus 476 l-~~l~~L~~L~l~~N~l~g~iP~~~~---~~~~~~~~~~N~~ 514 (927)
+ ..+++|+.|+|++|.+++..+..+. ..+..+.+.+|+.
T Consensus 476 l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 476 VLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 4 5678888888888888644333222 2556667777654
No 431
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.07 E-value=0.064 Score=54.44 Aligned_cols=103 Identities=12% Similarity=0.054 Sum_probs=68.8
Q ss_pred CCHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcccccCCCcEEEeeccccccccccccccc
Q 002410 686 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 765 (927)
Q Consensus 686 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~ 765 (927)
-+|.++|... +.++++.+++.++.|.+.+|.-+-.. +.-..+=+.|..|++..+|.+.+.+ ..+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc----------
Confidence 3789998864 68899999999999999998776211 1111334456889999999888764 1111
Q ss_pred cccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 002410 766 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKP 807 (927)
Q Consensus 766 ~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~P 807 (927)
.....+.|||... ...+.+.=|||+|++||.-+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123466888764 3557889999999999999875555
No 432
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.99 E-value=0.02 Score=64.29 Aligned_cols=142 Identities=18% Similarity=0.199 Sum_probs=84.0
Q ss_pred ccccccccEEEEEEEECC--------CcEEEEEEccCccch------------------hHHHHHHHHHHHHhcC-CCce
Q 002410 611 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSH------------------RTQQFVTEVALLSRIH-HRNL 663 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~--------g~~vAvK~l~~~~~~------------------~~~~~~~E~~~L~~l~-HpnI 663 (927)
+.|..|-...+|+....+ ++.|.+++.-..... +.+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999998764 367888886442211 1122345888988885 4445
Q ss_pred eeeeeeeecCceEEEEEEecCCCCHHH-----------------HhccCC--CCCCCC--HHHHHHHHHHHH--------
Q 002410 664 VPLIGYCEEEHQRILVYEYMHNGTLRD-----------------RLHGSV--NQKPLD--WLTRLQIAHDAA-------- 714 (927)
Q Consensus 664 v~l~~~~~~~~~~~LV~E~~~~gsL~~-----------------~L~~~~--~~~~l~--~~~~~~i~~qia-------- 714 (927)
.++++++..+ +|+||++|-+|.. .++... ..+... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776532 8999998754421 111110 111122 234444443321
Q ss_pred --------------HHHH----HHHh-cCCCCeEecCCCCCcccccCC------CcEEEeecccccc
Q 002410 715 --------------KGLE----YLHT-GCNPGIIHRDVKSSNILLDIN------MRAKVSDFGLSRQ 756 (927)
Q Consensus 715 --------------~gL~----~LH~-~~~~~ivH~DLkp~NILld~~------~~~kL~DFGla~~ 756 (927)
.-+. +|.. .....++|+|+.+.||+++.+ +.+.|+||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 2222 124568999999999999876 7899999987754
No 433
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.76 E-value=0.0011 Score=65.58 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=62.5
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCC-CCCC-CCCcCcc----cccceeeccccc-ccCCCCCcCCCccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGP-LPDMSRL----IDLRIVHLENNE-LTGSLPSYMGSLPN 481 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~-l~g~-~p~~~~l----~~L~~L~Ls~N~-l~g~iP~~l~~l~~ 481 (927)
.+|++|||+++.++-.==..+.+|++|+.|+|+++. ++.. +-.+..+ ++|+.|+|++|. ++..==..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999875444567899999999999985 6542 2235553 479999999984 66332235678899
Q ss_pred cccccccccC
Q 002410 482 LQELHIENNS 491 (927)
Q Consensus 482 L~~L~l~~N~ 491 (927)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999998875
No 434
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.74 E-value=0.0013 Score=73.27 Aligned_cols=86 Identities=15% Similarity=0.272 Sum_probs=50.7
Q ss_pred CceEEEEecCCCCcccCCcccc--CCcccceecccC--CCCCCC--C----CCc--CcccccceeecccccccCCCCCcC
Q 002410 409 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDG--NFLTGP--L----PDM--SRLIDLRIVHLENNELTGSLPSYM 476 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~--~l~~L~~L~Ls~--N~l~g~--~----p~~--~~l~~L~~L~Ls~N~l~g~iP~~l 476 (927)
++|+.|+|..+++....-..+. .|++|+.|+|+. |...+. + +.+ ..+++|+.|+|.+|.+.+..+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 4677777777766544333443 677777777753 222221 1 112 246777777777777664333322
Q ss_pred ---CCccccccccccccCCCC
Q 002410 477 ---GSLPNLQELHIENNSFVG 494 (927)
Q Consensus 477 ---~~l~~L~~L~l~~N~l~g 494 (927)
..+++|+.|+|+.|.+.+
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBH
T ss_pred HhCccCCCCCEEECCCCCCCh
Confidence 246777777787777764
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.69 E-value=0.0091 Score=55.97 Aligned_cols=49 Identities=29% Similarity=0.399 Sum_probs=26.7
Q ss_pred eecccCCCCC-CCCC-CcCcccccceeecccccccCCCCCcCCCccccccccc
Q 002410 437 ELWLDGNFLT-GPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 487 (927)
Q Consensus 437 ~L~Ls~N~l~-g~~p-~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 487 (927)
.++.++++|+ ..+| .+. .+|+.|+|++|+|+..-+..|..+++|+.|+|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 62 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHL 62 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEEC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEe
Confidence 6777777776 2333 322 24667777777777332334455555554433
No 436
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.60 E-value=0.001 Score=73.99 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=60.4
Q ss_pred CCceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC-Cc--Ccccccceeeccc--ccccCC-----CCCcC-
Q 002410 408 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DM--SRLIDLRIVHLEN--NELTGS-----LPSYM- 476 (927)
Q Consensus 408 ~~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~--~~l~~L~~L~Ls~--N~l~g~-----iP~~l- 476 (927)
.++|+.|+|++|.-. .++. + .+++|+.|+|..|.++...- .+ ..+++|+.|+|+. |...|. +-..+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 468888888877311 2443 3 37888888888777654322 23 3678888888753 222221 11122
Q ss_pred -CCccccccccccccCCCCCCCcccc-----CCceeeeecCCC
Q 002410 477 -GSLPNLQELHIENNSFVGEIPPALL-----TGKVIFKYDNNP 513 (927)
Q Consensus 477 -~~l~~L~~L~l~~N~l~g~iP~~~~-----~~~~~~~~~~N~ 513 (927)
..+++|+.|+|.+|.+....+..+. ..+..+.++.|.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 2478888888888887644333222 245566666554
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.89 E-value=0.022 Score=64.23 Aligned_cols=100 Identities=14% Similarity=0.133 Sum_probs=65.1
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCC----CCC--CcCcccccceeecccccccCCCCCcCCCccccc
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG----PLP--DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ 483 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g----~~p--~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~ 483 (927)
.|+.|.| .++++..-+..|.+|++|+.|+|.+|.+.. .++ .|.+|++|+.++|.+ +++-.-...|.+|++|+
T Consensus 249 ~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 249 GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVT 326 (401)
T ss_dssp CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCC
T ss_pred CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCcc
Confidence 5777777 455663445678888888888888887761 233 378888888888884 46623334677788888
Q ss_pred cccccccCCCCCCCccccC--CceeeeecCCC
Q 002410 484 ELHIENNSFVGEIPPALLT--GKVIFKYDNNP 513 (927)
Q Consensus 484 ~L~l~~N~l~g~iP~~~~~--~~~~~~~~~N~ 513 (927)
.|.|.+| ++ .|+...+. .+..+.+.+|.
T Consensus 327 ~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 327 QLTIPAN-VT-QINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp EEEECTT-CC-EECTTSSSSSCCCEEEECCSS
T ss_pred EEEECcc-cc-EEcHHhCCCCCCCEEEEcCCC
Confidence 8888554 55 56655544 34455555553
No 438
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.61 E-value=0.034 Score=62.66 Aligned_cols=90 Identities=11% Similarity=0.101 Sum_probs=69.8
Q ss_pred CceEEEEecCCCCc-----ccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCCCcCCCcccc
Q 002410 409 PRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNL 482 (927)
Q Consensus 409 ~~l~~L~L~~n~l~-----g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L 482 (927)
.+|+.|+|.+|.+. ..-+..|.+|++|+.|+|.+ +++..... |.+|++|+.|+|.+| ++-.-+..|.++ +|
T Consensus 271 ~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L 347 (401)
T 4fdw_A 271 PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GI 347 (401)
T ss_dssp TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CC
T ss_pred CCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CC
Confidence 47899999888765 23446799999999999994 56665553 999999999999766 663345688899 99
Q ss_pred ccccccccCCCCCCCccccC
Q 002410 483 QELHIENNSFVGEIPPALLT 502 (927)
Q Consensus 483 ~~L~l~~N~l~g~iP~~~~~ 502 (927)
+.|++++|.+. .++...+.
T Consensus 348 ~~l~l~~n~~~-~l~~~~F~ 366 (401)
T 4fdw_A 348 KEVKVEGTTPP-QVFEKVWY 366 (401)
T ss_dssp CEEEECCSSCC-BCCCSSCC
T ss_pred CEEEEcCCCCc-cccccccc
Confidence 99999999887 56654443
No 439
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.22 E-value=0.13 Score=58.25 Aligned_cols=140 Identities=14% Similarity=0.191 Sum_probs=84.5
Q ss_pred ccccccccEEEEEEEECC--------CcEEEEEEccCccchhHHHHHHHHHHHHhcC-CCceeeeeeeeecCceEEEEEE
Q 002410 611 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 681 (927)
Q Consensus 611 ~~LG~G~~G~Vy~a~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~-HpnIv~l~~~~~~~~~~~LV~E 681 (927)
+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+. +.-..++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 567778888999998763 5789999865432 11122357888888885 322345555432 268999
Q ss_pred ecCCCCHHH--------------H---hccC-------C---CCCCCCHHHHHHHHHHHH-------------------H
Q 002410 682 YMHNGTLRD--------------R---LHGS-------V---NQKPLDWLTRLQIAHDAA-------------------K 715 (927)
Q Consensus 682 ~~~~gsL~~--------------~---L~~~-------~---~~~~l~~~~~~~i~~qia-------------------~ 715 (927)
|++|..|.. . ++.. . ...+.-+.++.++..++- .
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865311 0 1100 0 111112444444433321 2
Q ss_pred HHHHHHh---------------------cCCCCeEecCCCCCcccccCCCcEEEeecccccc
Q 002410 716 GLEYLHT---------------------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 756 (927)
Q Consensus 716 gL~~LH~---------------------~~~~~ivH~DLkp~NILld~~~~~kL~DFGla~~ 756 (927)
.+..|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2333321 11356899999999999 8888999999998764
No 440
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.55 E-value=0.53 Score=52.71 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=25.2
Q ss_pred CeEecCCCCCcccc------cCCCcEEEeecccccc
Q 002410 727 GIIHRDVKSSNILL------DINMRAKVSDFGLSRQ 756 (927)
Q Consensus 727 ~ivH~DLkp~NILl------d~~~~~kL~DFGla~~ 756 (927)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998865
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=90.69 E-value=0.026 Score=56.74 Aligned_cols=83 Identities=13% Similarity=0.192 Sum_probs=58.8
Q ss_pred CceEEEEecCC-CCcc----cCCccccCCcccceecccCCCCCCCC----CC-cCcccccceeecccccccCC----CCC
Q 002410 409 PRITKIALSGK-NLKG----EIPPELKNMEALTELWLDGNFLTGPL----PD-MSRLIDLRIVHLENNELTGS----LPS 474 (927)
Q Consensus 409 ~~l~~L~L~~n-~l~g----~ip~~l~~l~~L~~L~Ls~N~l~g~~----p~-~~~l~~L~~L~Ls~N~l~g~----iP~ 474 (927)
+.|++|+|++| ++.. .+-..+..-+.|+.|+|++|+|...- -+ +..-+.|+.|+|++|+|... |-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46889999986 6642 24456777789999999999986421 12 44557899999999998732 223
Q ss_pred cCCCccccccccccccC
Q 002410 475 YMGSLPNLQELHIENNS 491 (927)
Q Consensus 475 ~l~~l~~L~~L~l~~N~ 491 (927)
.+..-+.|+.|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 45445679999998764
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=87.77 E-value=0.51 Score=52.09 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=58.4
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCCC-cCcccccceeecccccccCCCC-CcCCCccccccccc
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHI 487 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~l 487 (927)
.++.+.+.. ++...-...|.++++|+.+.|.+|.++..-.. |.++.+|+.+.|.++ ++ .|. ..|.+|.+|+.+.+
T Consensus 264 ~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 264 ALKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCC
T ss_pred hhccccccc-cceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEE
Confidence 466666654 35523334677888888888888877765553 888888888888755 55 454 46778888888887
Q ss_pred cccCCCCCCCcccc
Q 002410 488 ENNSFVGEIPPALL 501 (927)
Q Consensus 488 ~~N~l~g~iP~~~~ 501 (927)
..| ++ .|....+
T Consensus 341 p~~-v~-~I~~~aF 352 (379)
T 4h09_A 341 PKS-IT-LIESGAF 352 (379)
T ss_dssp CTT-CC-EECTTTT
T ss_pred CCc-cC-EEchhHh
Confidence 654 44 4554444
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=86.76 E-value=0.51 Score=52.55 Aligned_cols=77 Identities=12% Similarity=0.085 Sum_probs=47.0
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC-CcCcccccceeecccccccCCCC-CcCCCccccccccc
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHI 487 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~l 487 (927)
.|+.+.+.++ +...-...|.++++|+.++|.++ ++..-. .|.++.+|+.++|..| ++ .|+ ..|.+|++|+.++|
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEE
Confidence 5666666543 55222345777777777777644 443333 3777777777777666 55 343 46677777777777
Q ss_pred ccc
Q 002410 488 ENN 490 (927)
Q Consensus 488 ~~N 490 (927)
..|
T Consensus 374 p~~ 376 (394)
T 4fs7_A 374 PKR 376 (394)
T ss_dssp EGG
T ss_pred CCC
Confidence 544
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=86.54 E-value=0.92 Score=50.40 Aligned_cols=86 Identities=13% Similarity=0.225 Sum_probs=41.6
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC-CcCcccccceeecccccccCCC-CCcCCCccccccccc
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELHI 487 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~i-P~~l~~l~~L~~L~l 487 (927)
.++.+.+.++-.. .-...|.+++.|+.+.+. +.++.... .|.++.+|+.++|..| ++ .| ...|.+|.+|+.+.|
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEE
Confidence 3445555433221 223345556666666664 23333222 2566666666666543 33 23 235556666666666
Q ss_pred cccCCCCCCCcccc
Q 002410 488 ENNSFVGEIPPALL 501 (927)
Q Consensus 488 ~~N~l~g~iP~~~~ 501 (927)
..+ ++ .|+...+
T Consensus 342 p~s-v~-~I~~~aF 353 (394)
T 4gt6_A 342 PSS-VT-KIPESAF 353 (394)
T ss_dssp CTT-CC-BCCGGGG
T ss_pred Ccc-cC-EEhHhHh
Confidence 433 44 4554433
No 445
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=85.47 E-value=0.12 Score=50.88 Aligned_cols=70 Identities=10% Similarity=0.125 Sum_probs=49.1
Q ss_pred cCCccccCCcccceecccCCCCCCC-CCCcCcccccceeeccccc-ccCCCCCcCCCc----cccccccccccC-CC
Q 002410 424 EIPPELKNMEALTELWLDGNFLTGP-LPDMSRLIDLRIVHLENNE-LTGSLPSYMGSL----PNLQELHIENNS-FV 493 (927)
Q Consensus 424 ~ip~~l~~l~~L~~L~Ls~N~l~g~-~p~~~~l~~L~~L~Ls~N~-l~g~iP~~l~~l----~~L~~L~l~~N~-l~ 493 (927)
.+|.....--.|+.|||+++.++.. +..+..+++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++. ++
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 3455433335799999999987653 3457899999999999995 653222234443 479999999875 55
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=83.26 E-value=1.2 Score=49.10 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=64.8
Q ss_pred ceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC-CcCcccccceeecccccccCCCC-CcCCCccccccccc
Q 002410 410 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHI 487 (927)
Q Consensus 410 ~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~l 487 (927)
.|+.+.+..+ ++..-...|.++.+|+.+.+..+ +..... .|.++.+|+.+.|.+|.++ .|+ ..|.+|.+|+.+.|
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEEC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEEc
Confidence 5777777665 55333456888999999998755 443333 3899999999999999888 554 57889999999999
Q ss_pred cccCCCCCCCccccC
Q 002410 488 ENNSFVGEIPPALLT 502 (927)
Q Consensus 488 ~~N~l~g~iP~~~~~ 502 (927)
.++ ++ .|+...+.
T Consensus 318 p~~-l~-~I~~~aF~ 330 (379)
T 4h09_A 318 PTA-LK-TIQVYAFK 330 (379)
T ss_dssp CTT-CC-EECTTTTT
T ss_pred Ccc-cc-EEHHHHhh
Confidence 755 65 67665543
No 447
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=82.10 E-value=1.1 Score=49.88 Aligned_cols=80 Identities=14% Similarity=0.213 Sum_probs=58.5
Q ss_pred CceEEEEecCCCCcccCCccccCCcccceecccCCCCCCCCC-CcCcccccceeecccccccCCCC-CcCCCcccccccc
Q 002410 409 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELH 486 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~ 486 (927)
..|+.+.+. +++...-...|.+|++|+.++|..| ++..-. .|.++.+|+.+.|..+ ++ .|. ..|.+|++|+.++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEE
Confidence 357778875 5566333456888999999999865 444333 3889999999999765 66 554 4788999999999
Q ss_pred ccccCC
Q 002410 487 IENNSF 492 (927)
Q Consensus 487 l~~N~l 492 (927)
+.+|..
T Consensus 364 ~~~~~~ 369 (394)
T 4gt6_A 364 YSGSRS 369 (394)
T ss_dssp ESSCHH
T ss_pred ECCcee
Confidence 887754
No 448
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=80.56 E-value=0.11 Score=52.27 Aligned_cols=83 Identities=17% Similarity=0.167 Sum_probs=55.4
Q ss_pred CceEEEEecCCCCccc----CCccccCCcccceecccCCCCCCCCC-----CcCcccccceeecccccc---cC----CC
Q 002410 409 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPLP-----DMSRLIDLRIVHLENNEL---TG----SL 472 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~----ip~~l~~l~~L~~L~Ls~N~l~g~~p-----~~~~l~~L~~L~Ls~N~l---~g----~i 472 (927)
..|+.|+|++|+|... |...+..-+.|+.|+|++|+|+..-- .+..-+.|+.|+|++|.. .. .|
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 5799999999999743 33445566899999999999975321 255556799999997633 21 12
Q ss_pred CCcCCCccccccccccccC
Q 002410 473 PSYMGSLPNLQELHIENNS 491 (927)
Q Consensus 473 P~~l~~l~~L~~L~l~~N~ 491 (927)
-+.+..-+.|+.|+++.|.
T Consensus 150 a~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHCSSCCEEECCCCC
T ss_pred HHHHHhCCCcCeEeccCCC
Confidence 2233334566666665544
No 449
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=75.88 E-value=1.4 Score=48.79 Aligned_cols=72 Identities=15% Similarity=0.179 Sum_probs=54.7
Q ss_pred CceEEEEecCCCCcccC-CccccCCcccceecccCCCCCCCCC-CcCcccccceeecccccccCCCCCcCCCccccccc
Q 002410 409 PRITKIALSGKNLKGEI-PPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 485 (927)
Q Consensus 409 ~~l~~L~L~~n~l~g~i-p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L 485 (927)
.+|+.++|.++ ++ .| ...|.+|++|+.++|..| ++..-. .|.++++|+.++|+.| ++ .+...|.++++|+.+
T Consensus 320 ~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 46888999744 66 45 467999999999999877 654444 4999999999999866 33 445678888888764
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=72.85 E-value=8.4 Score=38.80 Aligned_cols=115 Identities=12% Similarity=0.128 Sum_probs=78.4
Q ss_pred CCCceeeeeeeeecCceEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 002410 659 HHRNLVPLIGYCEEEHQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 737 (927)
Q Consensus 659 ~HpnIv~l~~~~~~~~~~~LV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~~LH~~~~~~ivH~DLkp~N 737 (927)
.||+++.. .+-.+++...+.++.-+.+ ++.. + +..+...+++++.+|+....+++. -+|--|+|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence 58888866 4555666655656544322 2222 2 346788899999999998866663 4788999999
Q ss_pred ccccCCCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 002410 738 ILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 809 (927)
Q Consensus 738 ILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 809 (927)
++++.++.+++.=.|+... ++|.- .++..=.-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~------------------l~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNV------------------VDPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTT------------------BSCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccC------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999986665322 22321 1222234457789999999999886
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=68.02 E-value=0.61 Score=53.33 Aligned_cols=59 Identities=8% Similarity=0.102 Sum_probs=17.3
Q ss_pred hcccccccccEEEEEEEECC-CcEEEE------EEccCcc--chhHHHHHHHHHHHHhcCCCceeeeeeee
Q 002410 609 FCKKIGKGSFGSVYYGKMKD-GKEVAV------KIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYC 670 (927)
Q Consensus 609 ~~~~LG~G~~G~Vy~a~~~~-g~~vAv------K~l~~~~--~~~~~~~~~E~~~L~~l~HpnIv~l~~~~ 670 (927)
+.+.|| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++.++|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 356777 99999999874 367888 7665422 22345688899999999999999998865
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=62.15 E-value=13 Score=37.49 Aligned_cols=114 Identities=12% Similarity=0.121 Sum_probs=76.6
Q ss_pred CCCceeeeeeeeecCceEEEEEEecCCC-CHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCC
Q 002410 659 HHRNLVPLIGYCEEEHQRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLE-YLHTGCNPGIIHRDVKSS 736 (927)
Q Consensus 659 ~HpnIv~l~~~~~~~~~~~LV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~-~LH~~~~~~ivH~DLkp~ 736 (927)
.||++ -..+-.+++...+.++--+++ ++. .++ .++...+++++.+|+.... +++ .-+|--|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCc
Confidence 57777 334446667777777765333 333 332 3677888999988887766 454 4578899999
Q ss_pred cccccCCCcEEEeeccccccccccccccccccccCCCccCCCccCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 002410 737 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 809 (927)
Q Consensus 737 NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDVwSlGvlL~eLltG~~Pf~ 809 (927)
|+++|.++.+++.=.|+-. -++|.-+ ++.-=.-.+=|++..++.++..|.
T Consensus 114 NL~f~~~~~p~i~hRGi~~------------------~lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKE------------------SLPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETT------------------TBSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcc------------------cCCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998766432 2334322 222223357788888999888875
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=48.60 E-value=2.4 Score=31.15 Aligned_cols=11 Identities=27% Similarity=0.655 Sum_probs=5.6
Q ss_pred eeeeeechhhh
Q 002410 526 KLILGTSIGVL 536 (927)
Q Consensus 526 ~iil~~~ig~l 536 (927)
..+++.++|++
T Consensus 12 ~~Ia~~vVGvl 22 (44)
T 2jwa_A 12 TSIISAVVGIL 22 (44)
T ss_dssp HHHHHHHHHHH
T ss_pred cchHHHHHHHH
Confidence 33555566633
No 454
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=25.86 E-value=3.4e+02 Score=24.85 Aligned_cols=91 Identities=11% Similarity=0.171 Sum_probs=54.3
Q ss_pred CccceeeecccCCceeEEEEEeeecCCCCCCCCCeEEEEEcCceeEEEEecCCcc--ceEE-E-EEEecCCCCcccceec
Q 002410 80 NKKYCYNLITKERRRYLVRATFQYGSLGSEASYPKFQLYLDATLWSTVTVLDASR--VYAK-E-MIIRAPSDSIDVCICC 155 (927)
Q Consensus 80 ~~~~cy~l~~~~~~~ylvr~~~~yg~yd~~~~~p~fd~~~~~~~w~~v~~~~~~~--~~~~-e-~~~~~~~~~~~vcl~~ 155 (927)
|..==|++.+.+.|.|.|+..|.=|. ...-.++|+++|+.-.+|....+.. .+.. . -|...++. -.+=|..
T Consensus 38 G~~v~~~V~v~~aG~Y~l~~ryang~----~~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~-ntI~l~~ 112 (145)
T 2w3j_A 38 GASIVWSLSAASAKTYTAQIRFGNGG----TSARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGT-NSIKLVA 112 (145)
T ss_dssp TCEEEEEEEESSCEEEEEEEEEECCS----SSCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEE-EEEEEEE
T ss_pred CCEEEEEEECCCCeEEEEEEEEECCC----CCCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCc-eEEEEEE
Confidence 33345677777889999988765222 2346899999998877776533221 1211 1 23333333 2344444
Q ss_pred c-cCCCceeeeeeeeecCCCC
Q 002410 156 A-VTGSPFISTLELRPLNLSM 175 (927)
Q Consensus 156 ~-~~~~pfis~le~~~l~~~~ 175 (927)
+ +.|.|-|-.|+|.+.+...
T Consensus 113 ~~~~g~~niD~i~v~~~~~~~ 133 (145)
T 2w3j_A 113 ETADGLANIDSIRVTGNGITP 133 (145)
T ss_dssp CSTTCCCEEEEEEECSTTEEE
T ss_pred ecCcCCEEEEEEEEEcCCCCC
Confidence 3 3567999999998766443
No 455
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=23.10 E-value=6.4e+02 Score=29.24 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=49.3
Q ss_pred eeeeeeeecCceEEEEEEecCCCCHHHHhc----------cCCCCC----CCCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 002410 664 VPLIGYCEEEHQRILVYEYMHNGTLRDRLH----------GSVNQK----PLDWLTRLQIAHDAAK--GLEYLHTGCNPG 727 (927)
Q Consensus 664 v~l~~~~~~~~~~~LV~E~~~~gsL~~~L~----------~~~~~~----~l~~~~~~~i~~qia~--gL~~LH~~~~~~ 727 (927)
++.+.+........ +.|++++.++.+.+. +..... ...+..+..++..+|. .+.|+=.
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 34444544444433 356776655555443 211111 1224455556555443 3555543
Q ss_pred eEecCCCCCcccccCCCcEEEeeccccc
Q 002410 728 IIHRDVKSSNILLDINMRAKVSDFGLSR 755 (927)
Q Consensus 728 ivH~DLkp~NILld~~~~~kL~DFGla~ 755 (927)
-||=+++||||+.+|++.=+|||..-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 36778999999999999999999874
No 456
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=22.61 E-value=29 Score=21.33 Aligned_cols=16 Identities=38% Similarity=0.906 Sum_probs=13.8
Q ss_pred CcccCCCCCCCCcccC
Q 002410 200 DALRYPDDPYDRIWDS 215 (927)
Q Consensus 200 ~~~~~~~d~~dR~W~~ 215 (927)
...|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 5678999999999975
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.34 E-value=3.7e+02 Score=28.74 Aligned_cols=137 Identities=14% Similarity=0.139 Sum_probs=70.0
Q ss_pred cccccccccEEEEEEEECCCcEEEEEEccCccchhHHHHHHHHHHHHhcCCCceeeeeee--------------------
Q 002410 610 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGY-------------------- 669 (927)
Q Consensus 610 ~~~LG~G~~G~Vy~a~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~L~~l~HpnIv~l~~~-------------------- 669 (927)
.+..-.|. +.||.+.. ++..++||-.. ....+.+..++...-.+.-|+..-+.-.
T Consensus 74 I~~s~~Gs-tgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 74 IERSEKGT-EGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EEECCSTT-SCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EEeccCCC-CCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 34455555 45555554 57889999542 2233444445554444555553211100
Q ss_pred --eecCceEEEEEEecCCCCHHHHhccCCCCCCCCHHHHHHHHHHH--HHHHHHHHhcCCCC-eEe-cCCCCCcccccCC
Q 002410 670 --CEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDA--AKGLEYLHTGCNPG-IIH-RDVKSSNILLDIN 743 (927)
Q Consensus 670 --~~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qi--a~gL~~LH~~~~~~-ivH-~DLkp~NILld~~ 743 (927)
....+..+++|||.+|..|.+.-... ....+.. +.+.++ +-++..+....++- .++ .--.+.|||++++
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTS-APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHhhcccceehhhhcCCCccccchhhh-hhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 00123467999999876554321110 0011221 223332 33455555533332 222 2357899999875
Q ss_pred Cc-EEEeecccccc
Q 002410 744 MR-AKVSDFGLSRQ 756 (927)
Q Consensus 744 ~~-~kL~DFGla~~ 756 (927)
+. +.++|-+++..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 88899888755
No 458
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=20.40 E-value=37 Score=21.04 Aligned_cols=16 Identities=38% Similarity=0.906 Sum_probs=13.8
Q ss_pred CcccCCCCCCCCcccC
Q 002410 200 DALRYPDDPYDRIWDS 215 (927)
Q Consensus 200 ~~~~~~~d~~dR~W~~ 215 (927)
...|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (27)
T 1nro_R 6 FLLRNPNDKYEPFWED 21 (27)
T ss_pred ccccCCCcccCccccc
Confidence 4678999999999975
Done!