Query 002412
Match_columns 926
No_of_seqs 434 out of 2152
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 01:20:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002412.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002412hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 2.3E-38 7.9E-43 349.1 24.3 253 82-362 20-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 1.4E-34 4.8E-39 319.1 27.3 260 84-371 8-305 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 2.7E-34 9.1E-39 316.8 26.3 250 81-362 19-308 (309)
4 4fai_A CG5976, isoform B; alph 100.0 7.6E-34 2.6E-38 315.9 24.2 252 85-362 36-321 (330)
5 3gux_A Putative Zn-dependent e 100.0 1.6E-33 5.6E-38 310.9 26.5 249 82-362 22-312 (314)
6 3pb6_X Glutaminyl-peptide cycl 100.0 1.2E-32 4.1E-37 305.6 22.5 253 81-363 33-327 (330)
7 2afw_A Glutaminyl-peptide cycl 100.0 2.5E-31 8.5E-36 295.5 22.1 268 67-363 9-326 (329)
8 1tkj_A Aminopeptidase, SGAP; d 100.0 1.6E-30 5.5E-35 283.1 27.8 254 83-370 3-282 (284)
9 1rtq_A Bacterial leucyl aminop 100.0 6.5E-29 2.2E-33 272.3 23.4 260 82-370 15-293 (299)
10 3kas_A Transferrin receptor pr 100.0 3.1E-29 1.1E-33 299.2 18.3 208 161-373 265-491 (640)
11 3fed_A Glutamate carboxypeptid 99.9 3.7E-28 1.3E-32 292.5 15.2 208 160-372 310-553 (707)
12 3iib_A Peptidase M28; YP_92679 99.9 2.2E-26 7.6E-31 265.6 18.3 199 161-369 234-436 (444)
13 2ek8_A Aminopeptidase; metallo 99.9 7.9E-25 2.7E-29 251.0 19.9 198 162-372 203-408 (421)
14 3k9t_A Putative peptidase; str 99.8 2.9E-19 9.8E-24 200.0 20.5 178 169-367 174-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 6.4E-16 2.2E-20 166.6 18.0 232 87-365 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 3.9E-16 1.3E-20 168.1 15.4 232 87-365 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.6 9.2E-15 3.1E-19 150.6 16.4 146 83-258 6-174 (198)
18 1vhe_A Aminopeptidase/glucanas 99.6 2.6E-14 8.8E-19 161.1 18.3 225 87-365 7-354 (373)
19 1y0y_A FRV operon protein FRVX 99.6 3E-14 1E-18 159.3 16.6 221 89-365 8-350 (353)
20 2wyr_A Cobalt-activated peptid 99.5 3.8E-14 1.3E-18 157.0 15.9 148 197-363 171-332 (332)
21 2gre_A Deblocking aminopeptida 99.5 4.5E-14 1.5E-18 157.7 16.0 223 85-361 4-343 (349)
22 2fvg_A Endoglucanase; TM1049, 99.5 2.3E-13 7.8E-18 151.4 13.1 218 92-365 3-335 (340)
23 3n5f_A L-carbamoylase, N-carba 99.4 2.2E-12 7.4E-17 146.7 16.9 129 84-246 2-142 (408)
24 2zog_A Cytosolic non-specific 99.4 4.8E-12 1.6E-16 146.6 19.5 156 85-261 18-200 (479)
25 1cg2_A Carboxypeptidase G2; me 99.4 5.8E-12 2E-16 142.3 16.0 147 85-263 17-181 (393)
26 3ct9_A Acetylornithine deacety 99.3 2.3E-11 7.8E-16 135.9 16.4 135 86-262 10-164 (356)
27 3ife_A Peptidase T; metallopep 99.3 1E-11 3.5E-16 142.4 13.2 140 86-261 26-224 (434)
28 2pok_A Peptidase, M20/M25/M40 99.3 2.2E-11 7.4E-16 141.5 15.0 145 86-261 42-210 (481)
29 3dlj_A Beta-Ala-His dipeptidas 99.3 7.5E-11 2.6E-15 137.2 18.9 156 86-262 24-208 (485)
30 3pfo_A Putative acetylornithin 99.3 3.4E-11 1.2E-15 137.5 15.7 158 86-263 25-205 (433)
31 3gb0_A Peptidase T; NP_980509. 99.2 3.3E-11 1.1E-15 134.9 14.1 149 83-263 2-168 (373)
32 2v8h_A Beta-alanine synthase; 99.2 4.1E-11 1.4E-15 139.1 14.5 128 83-245 28-175 (474)
33 1z2l_A Allantoate amidohydrola 99.2 6.5E-11 2.2E-15 134.9 14.2 127 85-245 7-145 (423)
34 2rb7_A Peptidase, M20/M25/M40 99.2 6.6E-11 2.3E-15 132.6 13.3 139 85-261 4-164 (364)
35 3tx8_A Succinyl-diaminopimelat 99.2 7.7E-11 2.6E-15 131.8 13.7 139 87-262 13-167 (369)
36 1vho_A Endoglucanase; structur 99.2 3.7E-10 1.3E-14 125.5 17.9 224 88-366 6-337 (346)
37 1lfw_A PEPV; hydrolase, dipept 99.2 4.7E-10 1.6E-14 129.5 18.3 127 85-248 12-168 (470)
38 1ylo_A Hypothetical protein SF 99.2 4E-10 1.4E-14 125.2 16.6 218 91-365 7-338 (348)
39 3rza_A Tripeptidase; phosphory 99.1 1.9E-10 6.6E-15 130.1 12.8 152 81-262 18-188 (396)
40 1vgy_A Succinyl-diaminopimelat 99.1 1.9E-10 6.5E-15 129.9 12.6 142 85-262 4-168 (393)
41 1fno_A Peptidase T; metallo pe 99.1 1.2E-10 4.1E-15 132.5 11.0 138 87-262 2-198 (417)
42 3mru_A Aminoacyl-histidine dip 99.1 2.7E-10 9.2E-15 132.9 13.2 140 82-262 9-175 (490)
43 3khx_A Putative dipeptidase sa 99.1 5.8E-10 2E-14 130.1 15.9 127 85-249 32-188 (492)
44 3pfe_A Succinyl-diaminopimelat 99.1 4.9E-10 1.7E-14 130.0 14.0 145 87-261 18-192 (472)
45 3kl9_A PEPA, glutamyl aminopep 99.1 1.3E-09 4.5E-14 122.1 17.0 225 87-364 3-345 (355)
46 3isz_A Succinyl-diaminopimelat 99.1 6.5E-10 2.2E-14 124.0 13.2 139 87-261 3-164 (377)
47 1xmb_A IAA-amino acid hydrolas 99.0 3E-09 1E-13 121.4 17.0 135 87-260 28-176 (418)
48 2f7v_A Aectylcitrulline deacet 99.0 1.1E-09 3.9E-14 122.6 11.9 130 86-262 8-160 (369)
49 2qyv_A XAA-His dipeptidase; YP 99.0 1.7E-09 5.9E-14 125.7 13.3 139 83-262 7-172 (487)
50 3cpx_A Aminopeptidase, M42 fam 99.0 4.6E-10 1.6E-14 124.0 8.1 224 88-362 18-320 (321)
51 1ysj_A Protein YXEP; M20 famil 99.0 5.3E-09 1.8E-13 118.7 15.6 137 86-259 31-181 (404)
52 2vpu_A TET3, 354AA long hypoth 98.9 2.5E-08 8.6E-13 111.6 16.6 220 88-365 10-349 (354)
53 3ram_A HMRA protein; two-domai 98.8 1.7E-08 6E-13 114.3 13.0 140 86-261 15-157 (394)
54 3io1_A Aminobenzoyl-glutamate 98.6 4.8E-07 1.7E-11 104.0 16.1 159 86-260 13-209 (445)
55 3isx_A Endoglucanase; TM1050, 98.6 8.6E-07 2.9E-11 98.8 17.1 209 90-360 14-341 (343)
56 2wzn_A TET3, 354AA long hypoth 98.3 1.2E-05 3.9E-10 86.1 15.8 56 306-366 294-350 (354)
57 2ek8_A Aminopeptidase; metallo 91.9 0.26 8.7E-06 56.0 7.8 44 81-125 10-53 (421)
58 3iib_A Peptidase M28; YP_92679 91.6 0.21 7.3E-06 57.2 6.8 42 84-125 18-60 (444)
59 2glf_A Probable M18-family ami 90.7 0.47 1.6E-05 54.5 8.4 151 195-361 245-448 (450)
60 2ijz_A Probable M18-family ami 89.9 0.4 1.4E-05 54.7 6.9 142 194-347 230-412 (428)
61 3fed_A Glutamate carboxypeptid 82.8 1.6 5.4E-05 52.9 7.0 43 82-125 20-62 (707)
62 3kas_A Transferrin receptor pr 76.1 0.9 3.1E-05 54.4 1.9 44 83-126 14-59 (640)
63 3vat_A Dnpep, aspartyl aminope 74.6 2.8 9.7E-05 48.5 5.5 158 195-364 281-487 (496)
64 2glj_A Probable M18-family ami 73.3 1.2 4E-05 51.4 1.8 45 195-243 257-301 (461)
65 1y7e_A Probable M18-family ami 68.9 0.83 2.8E-05 52.6 -0.7 46 195-243 251-296 (458)
66 2lx0_A Membrane fusion protein 42.6 23 0.0008 24.4 3.2 18 631-648 7-24 (32)
67 2l8s_A Integrin alpha-1; trans 36.3 55 0.0019 26.4 5.0 36 622-659 5-40 (54)
68 1q7l_B Aminoacylase-1; catalys 31.6 70 0.0024 27.3 5.5 60 304-367 22-82 (88)
69 2glf_A Probable M18-family ami 24.5 87 0.003 35.7 6.1 65 109-192 33-97 (450)
70 2ijz_A Probable M18-family ami 23.2 47 0.0016 37.7 3.6 73 105-192 14-86 (428)
71 2knc_A Integrin alpha-IIB; tra 23.0 1.4E+02 0.0047 24.1 5.2 35 623-659 9-43 (54)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.3e-38 Score=349.14 Aligned_cols=253 Identities=20% Similarity=0.205 Sum_probs=196.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccc
Q 002412 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD 161 (926)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~ 161 (926)
.+||++||+++|++++++|||++||++++++++||.++|+++|. +++.+.+..... . ..+.+
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~------~v~~q~~~~~~~---------~---~~~~~ 81 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGA------KVTNQYADLIAY---------D---GTLLK 81 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEECT---------T---SCEEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCC------eeEEEeEEeccC---------C---CCcce
Confidence 47999999999999999999999999999999999999999983 566665544210 0 11235
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEeeecccccCC-------------CCCCCchhHHHHHHHHHHHHHHccCCCCccEEEE
Q 002412 162 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFL 228 (926)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Fl 228 (926)
..|||++++|+ .++.|+|+|||||++.+ +||+||++|||+|||++|.|.+. +++++|+|+
T Consensus 82 ~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~ 154 (309)
T 4fuu_A 82 ARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDII 154 (309)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred eEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEE
Confidence 68999999985 45789999999999753 69999999999999999999874 689999999
Q ss_pred EeCCcCCCC--------------cchhHHhhcCC-ccCCceEEEEeccCCCCCCcceeecCCC---hhHHHHHHHHccCC
Q 002412 229 FNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAIDLEAMGIGGKSGLFQAGPH---PWAVENFAAAAKYP 290 (926)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~-~~~~v~a~iNLD~~G~gG~~~lfq~g~~---~~li~~~~~~a~~p 290 (926)
|+++||.|+ +||+.|+++++ +..++.++||+||+|..++....+.... +.+.+.+.+.+...
T Consensus 155 ~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T 4fuu_A 155 FLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKA 234 (309)
T ss_dssp EECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHT
T ss_pred eecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhc
Confidence 999999995 89999997654 4578999999999998877654442221 23444444332211
Q ss_pred CCcchhhhhcccCCCCCCCChHHHhhcCCCeEEEEEeeC----CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 002412 291 SGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTD----KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 362 (926)
Q Consensus 291 ~~~~l~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~----~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~ 362 (926)
.... ....+.+. ...+||.+|.+.+|||+++++... ..++|||+.||+|+||+++||++|+++++++..
T Consensus 235 ~~~~--~~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 235 GYGK--TFIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp TCTT--TEEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred CCcc--cccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 1110 01122222 235799999976899999998643 235899999999999999999999999998863
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=1.4e-34 Score=319.06 Aligned_cols=260 Identities=18% Similarity=0.236 Sum_probs=193.7
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccc
Q 002412 84 FSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLN 163 (926)
Q Consensus 84 fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~ 163 (926)
-+.....+.|+.| ++||.+||++++++++||.++|+++|. +++.|.|...... ....+..
T Consensus 8 d~~~~~~~~l~~i--l~PR~~gs~~~~~~~~~i~~~l~~~g~------~v~~~~f~~~~~~------------~~~~~~~ 67 (312)
T 4f9u_A 8 DDEVHFNRTLDSI--LVPRVVGSRGHQQVREYLVQSLNGLGF------QTEVDEFKQRVPV------------FGELTFA 67 (312)
T ss_dssp CCHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEEETT------------TEEEEEE
T ss_pred CHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHCCC------eEEEEeEEEecCC------------CCceeEE
Confidence 3556666677777 479999999999999999999999983 5666666542110 0122568
Q ss_pred eEEEEEcCCCCCcCCCCEEEEeeecccccC-----CCCCCCchhHHHHHHHHHHHHHHc-----cCCCCccEEEEEeCCc
Q 002412 164 HIVLRIQPKYASEAAENAILVSSHIDTVFA-----AEGAGDCSSCVAVMLELARAMSQW-----AHGFKNAVIFLFNTGE 233 (926)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-----spGA~Dd~sgva~~LE~ar~L~~~-----~~~p~~~I~Flf~~~E 233 (926)
|||++++|+ +++.|+|+|||||++. .+||+||++|||+|||+||.|.+. +.+|+|+|+|+|++||
T Consensus 68 Nii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaE 142 (312)
T 4f9u_A 68 NVVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGE 142 (312)
T ss_dssp EEEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCC
T ss_pred EEEEEECCC-----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCc
Confidence 999999985 4678999999999853 589999999999999999999762 4679999999999999
Q ss_pred CCC--------CcchhHHhhcCCcc-------------CCceEEEEeccCCCCCCcceeecCCChhHH-------HHHHH
Q 002412 234 EEG--------LNGAHSFVTQHPWS-------------TTIRVAIDLEAMGIGGKSGLFQAGPHPWAV-------ENFAA 285 (926)
Q Consensus 234 E~g--------l~GS~~f~~~h~~~-------------~~v~a~iNLD~~G~gG~~~lfq~g~~~~li-------~~~~~ 285 (926)
|.| ++||++|++++++. +++.+++|+|++|..++..........+.. +.+.+
T Consensus 143 E~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 222 (312)
T 4f9u_A 143 EAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRT 222 (312)
T ss_dssp SCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHH
Confidence 987 99999999876432 468999999999987765421111112221 11222
Q ss_pred HccCCCCcchhhhhcccCCCCCCCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHc
Q 002412 286 AAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 365 (926)
Q Consensus 286 ~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~ 365 (926)
....+............+ ..++||.+|.+ .|||++++......++|||+.||+|+||+++|+++++.+.+++.+..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~ 299 (312)
T 4f9u_A 223 AGQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLK 299 (312)
T ss_dssp TTCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccCCC--CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 111111111000111111 23689999998 899999999887778899999999999999999999999999998877
Q ss_pred CCCCCC
Q 002412 366 STSLPK 371 (926)
Q Consensus 366 ~~~l~~ 371 (926)
....|.
T Consensus 300 ~~~~P~ 305 (312)
T 4f9u_A 300 RHTSPV 305 (312)
T ss_dssp HCCSCC
T ss_pred CCCCCC
Confidence 666664
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=2.7e-34 Score=316.75 Aligned_cols=250 Identities=20% Similarity=0.247 Sum_probs=197.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002412 81 KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 160 (926)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~ 160 (926)
..+|+++||+++|++|+++++|..||+++.++++||.++|+++|. ++++|.+.... ..+ .+.
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~------~v~~~~~~~~~---------~~g---~~~ 80 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGA------KVYQQEAILTA---------YDG---TKL 80 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEEC---------TTS---CEE
T ss_pred ccccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCC------eEEEEEeeccc---------cCC---Ccc
Confidence 468999999999999999999999999999999999999999983 45666554311 001 123
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEeeecccccCC-------------CCCCCchhHHHHHHHHHHHHHHccCCCCccEEE
Q 002412 161 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF 227 (926)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~F 227 (926)
+..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|.+. +++++|+|
T Consensus 81 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 81 EARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 578999999985 35799999999999876 79999999999999999999986 48999999
Q ss_pred EEeCCcCCCC-------------cchhHHhhcCCc-cCCceEEEEeccCCCCCCcceeecCC-C---hhHHHHHHHHccC
Q 002412 228 LFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGP-H---PWAVENFAAAAKY 289 (926)
Q Consensus 228 lf~~~EE~gl-------------~GS~~f~~~h~~-~~~v~a~iNLD~~G~gG~~~lfq~g~-~---~~li~~~~~~a~~ 289 (926)
+|+++||.|+ +||++|+++++. ..++.++||+||+|..++..... +. . +.+++.+.+.++
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~- 231 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAAR- 231 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHH-
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHH-
Confidence 9999999999 999999965443 36899999999999987653221 22 1 234555544321
Q ss_pred CCCcchhhhhccc---CCCCCCCChHHHhhcCCCeEEEEEee------CCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 002412 290 PSGQVTAQDLFAS---GAITSATDFQVYKEVAGLSGLDFAYT------DKSAVYHTKNDKLDLLKPGSLQHLGENMLAFL 360 (926)
Q Consensus 290 p~~~~l~~~~f~~---g~ips~TD~~~F~~~~GIPgld~a~~------~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv 360 (926)
..+. ...|+. |.+ .+||.+|.+++|||+++++.. ...++|||+.||+|+||+++|+++++++++++
T Consensus 232 ~~g~---~~~f~~~~~g~~--~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 232 DLGY---GKYFINAAGGAI--TDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp HHTC---TTTEEEEECCCC--CCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred HcCC---cceeccCCCCCC--CCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 1111 122322 222 689999998679999999865 34579999999999999999999999999998
Q ss_pred HH
Q 002412 361 LQ 362 (926)
Q Consensus 361 ~~ 362 (926)
.+
T Consensus 307 y~ 308 (309)
T 3tc8_A 307 YN 308 (309)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 4
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=7.6e-34 Score=315.91 Aligned_cols=252 Identities=20% Similarity=0.265 Sum_probs=183.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002412 85 SEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 164 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~N 164 (926)
+.++..+.|+.| ++||++||++++++++||.++|+++|. +++.|.|..... ..+ ..+..|
T Consensus 36 ~~~~~~~~l~~i--l~pR~~Gs~~~~~~~~~i~~~l~~~g~------~v~~q~f~~~~~--------~~~----~~~~~N 95 (330)
T 4fai_A 36 DKLHLREAIDKI--LIPRVVGTTNHSIVREYIVQSLRDLDW------DVEVNSFHDHAP--------IKG----KLHFHN 95 (330)
T ss_dssp CHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEEET--------TTE----EEEEEE
T ss_pred HHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHCCC------EEEEeeeeeecC--------CCC----ceeEEE
Confidence 445555555555 579999999999999999999999983 566676654211 001 225689
Q ss_pred EEEEEcCCCCCcCCCCEEEEeeecccccC----CCCCCCchhHHHHHHHHHHHHHH---ccCCCCccEEEEEeCCcCCCC
Q 002412 165 IVLRIQPKYASEAAENAILVSSHIDTVFA----AEGAGDCSSCVAVMLELARAMSQ---WAHGFKNAVIFLFNTGEEEGL 237 (926)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~----spGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~Flf~~~EE~gl 237 (926)
||++++|+ .++.|+|+|||||++. .+||+||++|||+|||+||.|++ .+.+|+++|+|+|++|||.|+
T Consensus 96 ii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl 170 (330)
T 4fai_A 96 IIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFE 170 (330)
T ss_dssp EEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSS
T ss_pred EEEEECCC-----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccc
Confidence 99999885 4678999999999864 47999999999999999999976 356799999999999999985
Q ss_pred --------cchhHHhhcC---CccCCceEEEEeccCCCCCCcceeecCCChhHHHHHH---H-H--c----cCC---CCc
Q 002412 238 --------NGAHSFVTQH---PWSTTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFA---A-A--A----KYP---SGQ 293 (926)
Q Consensus 238 --------~GS~~f~~~h---~~~~~v~a~iNLD~~G~gG~~~lfq~g~~~~li~~~~---~-~--a----~~p---~~~ 293 (926)
+||++|+++. .+.+++.++||+||+|..++..........+....+. + . . ..+ ...
T Consensus 171 ~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 4fai_A 171 EWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQ 250 (330)
T ss_dssp SCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC-----------
T ss_pred cccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhcccccc
Confidence 7999999753 2347899999999999887765332222222221111 1 0 0 000 000
Q ss_pred chhhhhcccCC---CCCCCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 002412 294 VTAQDLFASGA---ITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 362 (926)
Q Consensus 294 ~l~~~~f~~g~---ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~ 362 (926)
......|+... ....+||.+|.+ .|||++++...+.+++|||+.||+|+||+++++++++.+.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 251 RDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp ----CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 00011111100 113589999998 899999998777778999999999999999999999999888765
No 5
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=1.6e-33 Score=310.91 Aligned_cols=249 Identities=19% Similarity=0.299 Sum_probs=178.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccc
Q 002412 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD 161 (926)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~ 161 (926)
.+|+++|++++|++|+++++|..||+++.++++||.++|+++|. ++++|.+.... +.+ .+.+
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~------~v~~~~~~~~~---------~~g---~~~~ 83 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGA------KVYNQYADLIA---------YDG---TILK 83 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEEC---------TTS---CEEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCC------EEEEEEeeccc---------cCC---Cccc
Confidence 57999999999999999999999999999999999999999983 55666554311 001 1235
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEeeecccccCC-------------CCCCCchhHHHHHHHHHHHHHHccCCCCccEEEE
Q 002412 162 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFL 228 (926)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Fl 228 (926)
..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|.+. +++++|+|+
T Consensus 84 ~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv 156 (314)
T 3gux_A 84 SRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIV 156 (314)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred ceEEEEEECCC-----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEE
Confidence 68999999985 35789999999999865 79999999999999999999986 489999999
Q ss_pred EeCCcCCCC--------------cchhHHhhcCCc-cCCceEEEEeccCCCCCCcceeecCCC----hhHHHHHHHHccC
Q 002412 229 FNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGPH----PWAVENFAAAAKY 289 (926)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~~-~~~v~a~iNLD~~G~gG~~~lfq~g~~----~~li~~~~~~a~~ 289 (926)
++++||.|+ +||++|+++++. ..+++++||+||+|..++. +++.+.. +++++.+.+.++.
T Consensus 157 ~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~-~~~~g~~~~~~~~l~~~~~~~~~~ 235 (314)
T 3gux_A 157 FFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDAT-FYYEGYSARTARSEMKKIWKKAHE 235 (314)
T ss_dssp EECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCC-EEECTTHHHHCHHHHHHHHHHHHH
T ss_pred EECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCc-eeeeccccccHHHHHHHHHHHHHH
Confidence 999999999 999999965443 3789999999999998765 4554542 3555655443221
Q ss_pred CCCcchhhhhccc---CCCCCCCChHHHhhcCCCeEEEEEeeCC-------CCCCCCCCCCcCCCCHHHHHHHHHHHHHH
Q 002412 290 PSGQVTAQDLFAS---GAITSATDFQVYKEVAGLSGLDFAYTDK-------SAVYHTKNDKLDLLKPGSLQHLGENMLAF 359 (926)
Q Consensus 290 p~~~~l~~~~f~~---g~ips~TD~~~F~~~~GIPgld~a~~~~-------~~~YHT~~Dt~d~id~~slq~~g~~~l~l 359 (926)
.+. ...|+. |. ..+||.+|.+++|||+++++.... .++|||+.||+|+||+++|++++++++.+
T Consensus 236 -~g~---~~~f~~~~~~~--~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~ 309 (314)
T 3gux_A 236 -LGY---GKYFVKEDGGE--TVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDV 309 (314)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHH
T ss_pred -cCC---ccccccccCCC--CCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHH
Confidence 111 112221 22 369999999867999999986531 36899999999999999999999999999
Q ss_pred HHH
Q 002412 360 LLQ 362 (926)
Q Consensus 360 v~~ 362 (926)
+.+
T Consensus 310 ~y~ 312 (314)
T 3gux_A 310 IYN 312 (314)
T ss_dssp HHT
T ss_pred Hhh
Confidence 864
No 6
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=1.2e-32 Score=305.60 Aligned_cols=253 Identities=21% Similarity=0.258 Sum_probs=193.3
Q ss_pred CCCCCHHHHHH-HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccc
Q 002412 81 KRGFSEFEAIK-HVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIY 159 (926)
Q Consensus 81 ~~~fs~erA~~-~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y 159 (926)
+.+|+.+|+++ +|+.+ +++|..||+++.++++||.+++++++. ..++++|.+..+.. .+ +
T Consensus 33 ~~~~~~~~~~~~~L~~~--~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~---------~g----~ 93 (330)
T 3pb6_X 33 VGQLDPQRLWSTYLRPL--LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP---------LG----P 93 (330)
T ss_dssp HHTCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET---------TE----E
T ss_pred cccCCHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc---------cC----C
Confidence 35799999998 78888 789999999999999999999999952 24666666543210 01 2
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEeeecccccC------CCCCCCchhHHHHHHHHHHHHHHc-----cCCCCccEEEE
Q 002412 160 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA------AEGAGDCSSCVAVMLELARAMSQW-----AHGFKNAVIFL 228 (926)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~------spGA~Dd~sgva~~LE~ar~L~~~-----~~~p~~~I~Fl 228 (926)
.+..|||++++|+ .++.|+++|||||++. .+||+||++|||+|||++|.|.+. +.+++++|.|+
T Consensus 94 ~~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv 168 (330)
T 3pb6_X 94 VDFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLL 168 (330)
T ss_dssp EEEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEE
T ss_pred ccceEEEEEECCC-----CCceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEE
Confidence 3678999999885 3578999999999863 389999999999999999999873 35799999999
Q ss_pred EeCCcCC--------CCcchhHHhhcCC---------ccCCceEEEEeccCCCCCCcceeecCC-ChhHHHHHH---HHc
Q 002412 229 FNTGEEE--------GLNGAHSFVTQHP---------WSTTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFA---AAA 287 (926)
Q Consensus 229 f~~~EE~--------gl~GS~~f~~~h~---------~~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~---~~a 287 (926)
|+++||. |++||++|++++. ..++|+++||+||+|..++... ...+ ..++.+.+. +..
T Consensus 169 ~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~-~~~~~t~~~~~~l~~i~~~~ 247 (330)
T 3pb6_X 169 FLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFY-SHFPRTVRWFHRLRSIEKRL 247 (330)
T ss_dssp EESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBC-CCCGGGHHHHHHHHHHHHHH
T ss_pred EEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCce-eecCcchHHHHHHHHHHHHH
Confidence 9999999 9999999986521 3478999999999999876542 2112 223322222 111
Q ss_pred -------cCCCCcchhhhhcccC--CCCCCCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHH
Q 002412 288 -------KYPSGQVTAQDLFASG--AITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLA 358 (926)
Q Consensus 288 -------~~p~~~~l~~~~f~~g--~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~ 358 (926)
.+|... ..|+.+ .-...+||.+|.+ .|||++++......+.|||+.||+|+||+++++++++.+..
T Consensus 248 ~~~g~~~~~p~~~----~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~ 322 (330)
T 3pb6_X 248 HRLNLLQSHPQEV----MYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAV 322 (330)
T ss_dssp HHTTCCSSCCSSC----SSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHH
T ss_pred HHcCccccCCccc----ccccccccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHH
Confidence 122111 122110 1124799999999 99999999876666799999999999999999999999999
Q ss_pred HHHHH
Q 002412 359 FLLQA 363 (926)
Q Consensus 359 lv~~L 363 (926)
++.+.
T Consensus 323 fv~Ey 327 (330)
T 3pb6_X 323 FLAEY 327 (330)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 7
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.97 E-value=2.5e-31 Score=295.54 Aligned_cols=268 Identities=21% Similarity=0.273 Sum_probs=197.5
Q ss_pred ccCCCCCCCccccC--CCCCCHHHH-HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH--hccccCCceeEEEEEEecc
Q 002412 67 YEHMPPPLTADQAG--KRGFSEFEA-IKHVKALTELGPHPVGSDALDRALQYVFAAAQK--IKETKHWEVDVEVDFFHAK 141 (926)
Q Consensus 67 ~~~lP~~~~~~~~~--~~~fs~erA-~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~--ig~~~~~~~~ve~d~~~~~ 141 (926)
++.+|.+++.++.+ +.+++.+|+ .++|++| +++|..+|++++++++||.+++++ .| .+++++.+...
T Consensus 9 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~ 80 (329)
T 2afw_A 9 NYHQPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQ 80 (329)
T ss_dssp HHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEEC
T ss_pred cccCCCCCChHHHHHhhhhcCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEec
Confidence 35577777644332 356999999 8999999 688999999999999999999999 55 35666655442
Q ss_pred CCcccccccccccccccccccceEEEEEcCCCCCcCCCCEEEEeeecccccCC-------CCCCCchhHHHHHHHHHHHH
Q 002412 142 SGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------EGAGDCSSCVAVMLELARAM 214 (926)
Q Consensus 142 ~g~~~~~gg~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s-------pGA~Dd~sgva~~LE~ar~L 214 (926)
.. .| +.+..||+++++|+ +++.|+++||||||+.. +||.||++|||+|||++|.|
T Consensus 81 ~~----~g---------~~~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l 142 (329)
T 2afw_A 81 TP----YG---------YRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARAL 142 (329)
T ss_dssp CT----TS---------SEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHT
T ss_pred CC----CC---------CceEeEEEEEECCC-----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHH
Confidence 10 00 12578999999874 46789999999999865 89999999999999999999
Q ss_pred HHc--------cCCCCccEEEEEeCCcCC--------CCcchhHHhhcCC------------ccCCceEEEEeccCCCCC
Q 002412 215 SQW--------AHGFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAIDLEAMGIGG 266 (926)
Q Consensus 215 ~~~--------~~~p~~~I~Flf~~~EE~--------gl~GS~~f~~~h~------------~~~~v~a~iNLD~~G~gG 266 (926)
.+. +.+++++|+|+|+++||. |+.||++|++++. ..+++.++||+|++|.++
T Consensus 143 ~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~ 222 (329)
T 2afw_A 143 DKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN 222 (329)
T ss_dssp HHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSS
T ss_pred HHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCC
Confidence 875 357899999999999998 9999999987642 145799999999999877
Q ss_pred Ccce--eecCCChhHHH---HHHHHccCC---CCcchhhhhcccCCC--CCCCChHHHhhcCCCeEEEEEeeCCCCCCCC
Q 002412 267 KSGL--FQAGPHPWAVE---NFAAAAKYP---SGQVTAQDLFASGAI--TSATDFQVYKEVAGLSGLDFAYTDKSAVYHT 336 (926)
Q Consensus 267 ~~~l--fq~g~~~~li~---~~~~~a~~p---~~~~l~~~~f~~g~i--ps~TD~~~F~~~~GIPgld~a~~~~~~~YHT 336 (926)
+... +.. ..+ +.+ ...+..... .........|..... ...+||.+|.+ .|||++++......+.|||
T Consensus 223 ~~~~~~~~~-~~~-~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt 299 (329)
T 2afw_A 223 PTFPNFFPN-SAR-WFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHT 299 (329)
T ss_dssp CCBCCCCGG-GHH-HHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTS
T ss_pred CceeeeccC-cch-HHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCC
Confidence 6432 221 112 222 122211100 000111112321111 13699999999 7999999998777789999
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 002412 337 KNDKLDLLKPGSLQHLGENMLAFLLQA 363 (926)
Q Consensus 337 ~~Dt~d~id~~slq~~g~~~l~lv~~L 363 (926)
++||++++|+++++++++.+..++.+.
T Consensus 300 ~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 300 MDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp TTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988887764
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.97 E-value=1.6e-30 Score=283.13 Aligned_cols=254 Identities=17% Similarity=0.203 Sum_probs=197.0
Q ss_pred CCCHHHHHHHHHHHHhc-----CCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccc
Q 002412 83 GFSEFEAIKHVKALTEL-----GPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTL 157 (926)
Q Consensus 83 ~fs~erA~~~L~~L~~i-----gpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~ 157 (926)
+++.++++++|++|+++ ++|..|++++.++++||.++++++|. +++.+.+...
T Consensus 3 ~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~------~v~~~~~~~~---------------- 60 (284)
T 1tkj_A 3 DIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGY------TTTLQQFTSG---------------- 60 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTC------EEEEEEEEET----------------
T ss_pred cCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCC------eEEEEEeccC----------------
Confidence 67899999999999985 36778888888999999999999983 4555433210
Q ss_pred cccccceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCC
Q 002412 158 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGL 237 (926)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl 237 (926)
..+..||+++++|+ .+++.|+++||+|+|+.++||.||++|+|++||++|.|.+.+.+++++|+|+|+++||.|+
T Consensus 61 -~~~~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~ 135 (284)
T 1tkj_A 61 -GATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGL 135 (284)
T ss_dssp -TEEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS
T ss_pred -CCCceeEEEEEeCC----CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCC
Confidence 01357999999875 2457899999999999999999999999999999999998877899999999999999999
Q ss_pred cchhHHhhcCCc--cCCceEEEEeccCCCCCCcceeecCCChhHHHHHHHHccCCCCcchhhhhcccCCCCCCCChHHHh
Q 002412 238 NGAHSFVTQHPW--STTIRVAIDLEAMGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYK 315 (926)
Q Consensus 238 ~GS~~f~~~h~~--~~~v~a~iNLD~~G~gG~~~lfq~g~~~~li~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~ 315 (926)
.||+.|+++++. .+++.++||+|+.|..+....+. +.++.+.+.+.+.+++ .+.. .+... .-..+|||.+|.
T Consensus 136 ~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~-~gi~--~~~~~--~~~~~sD~~~f~ 209 (284)
T 1tkj_A 136 IGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAG-LNVP--TEIET--EGDGRSDHAPFK 209 (284)
T ss_dssp HHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHH-HTCC--CEECC--SSTTCSTHHHHH
T ss_pred cCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHHHHHHH-cCCC--cccCC--CCCCCCchHHHH
Confidence 999999988764 36899999999999876544333 3456555544433211 1100 01111 113579999999
Q ss_pred hcCCCeEEEEEeeC-------------------CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 002412 316 EVAGLSGLDFAYTD-------------------KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLP 370 (926)
Q Consensus 316 ~~~GIPgld~a~~~-------------------~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~~~~l~ 370 (926)
+ .|||++.+.... ..++|||+.||++++|.+.++++++.+..+++.|++++.+|
T Consensus 210 ~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 210 N-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp H-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred H-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 7 999999987641 14689999999999999999999999999999999988876
No 9
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.96 E-value=6.5e-29 Score=272.31 Aligned_cols=260 Identities=18% Similarity=0.242 Sum_probs=196.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccc
Q 002412 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD 161 (926)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~ 161 (926)
.+++.++++++|++|+++++|..+|+++.++++||.+++++++... + .++++.+... ..+
T Consensus 15 ~~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~--~-~~~~~~~~~~-----------------~~~ 74 (299)
T 1rtq_A 15 PQVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASL--P-NASVKQVSHS-----------------GYN 74 (299)
T ss_dssp GGCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTS--T-TEEEEEEEET-----------------TEE
T ss_pred HhcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCc--c-cceeeeeccC-----------------CCC
Confidence 4689999999999999998898899988899999999999987321 1 2444433210 014
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEeeecccccC--------CCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCc
Q 002412 162 LNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGE 233 (926)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~E 233 (926)
..||+++++|+ +.+++.|+++||+|||+. ++||.||++|||++||++|.|.+.+.+++++|+|+|+++|
T Consensus 75 ~~nvi~~~~g~---~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~E 151 (299)
T 1rtq_A 75 QKSVVMTITGS---EAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAE 151 (299)
T ss_dssp EEEEEEEECCS---SEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCG
T ss_pred CceEEEEEECC---CCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCc
Confidence 58999999885 224578999999999973 7999999999999999999999887789999999999999
Q ss_pred CCCCcchhHHhhcCCc-cCCceEEEEeccCCCCCC--cceeecC-CChhHHHHHHHHcc--CCCCcchhhhhcccCCCCC
Q 002412 234 EEGLNGAHSFVTQHPW-STTIRVAIDLEAMGIGGK--SGLFQAG-PHPWAVENFAAAAK--YPSGQVTAQDLFASGAITS 307 (926)
Q Consensus 234 E~gl~GS~~f~~~h~~-~~~v~a~iNLD~~G~gG~--~~lfq~g-~~~~li~~~~~~a~--~p~~~~l~~~~f~~g~ips 307 (926)
|.|+.||+.++++++. .+++.++||+|++|..|. ...+... .++.+.+...+.++ .|. +... +.. ....
T Consensus 152 E~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~~~~~---i~~~-~~~-~~~~ 226 (299)
T 1rtq_A 152 EVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYLPS---LTYG-FDT-CGYA 226 (299)
T ss_dssp GGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHHHCTT---CCEE-EEC-CSSC
T ss_pred cCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHHhCcc---CCcc-cCC-CCCC
Confidence 9999999999977653 367899999999987543 2334332 24544333322211 111 1111 111 1125
Q ss_pred CCChHHHhhcCCCeEEEEEe---eCCCCCCCCCCCCcCCCCH--HHHHHHHHHHHHHHHHHHcCCCCC
Q 002412 308 ATDFQVYKEVAGLSGLDFAY---TDKSAVYHTKNDKLDLLKP--GSLQHLGENMLAFLLQAASSTSLP 370 (926)
Q Consensus 308 ~TD~~~F~~~~GIPgld~a~---~~~~~~YHT~~Dt~d~id~--~slq~~g~~~l~lv~~La~~~~l~ 370 (926)
+|||.+|.+ .|||++.+.. .+...+|||+.||++++|+ ..++++++.+.+++.+|++++.+.
T Consensus 227 ~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 227 CSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDT 293 (299)
T ss_dssp CSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CCcHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 799999998 9999986542 2244689999999999998 588999999999999999988754
No 10
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.96 E-value=3.1e-29 Score=299.23 Aligned_cols=208 Identities=18% Similarity=0.179 Sum_probs=175.4
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHc----cCCCCccEEEEEeCCcCCC
Q 002412 161 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQW----AHGFKNAVIFLFNTGEEEG 236 (926)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~----~~~p~~~I~Flf~~~EE~g 236 (926)
...||+++++|+ +.++++|+++||+||| ++||.||++|+|+|||++|.|.+. +++|+|+|+|++|++||.|
T Consensus 265 ~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~--~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~g 339 (640)
T 3kas_A 265 KILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFG 339 (640)
T ss_dssp EEEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGT
T ss_pred eEEEEEEEEeCC---cCCCCceeeecccCCC--CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccC
Confidence 678999999996 2457899999999999 589999999999999999999864 6799999999999999999
Q ss_pred CcchhHHhhcCC--ccCCceEEEEeccCCCCCCcceeecCCC-hhHHHHHHHHccCCCC-cchhhh-hcc--cCCCCCCC
Q 002412 237 LNGAHSFVTQHP--WSTTIRVAIDLEAMGIGGKSGLFQAGPH-PWAVENFAAAAKYPSG-QVTAQD-LFA--SGAITSAT 309 (926)
Q Consensus 237 l~GS~~f~~~h~--~~~~v~a~iNLD~~G~gG~~~lfq~g~~-~~li~~~~~~a~~p~~-~~l~~~-~f~--~g~ips~T 309 (926)
+.||+.|+++|. +.+++.++||+|++|.|++...++.+|. .++++.+.+.+++|.+ .++.++ .+. .+.++++|
T Consensus 340 l~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~s 419 (640)
T 3kas_A 340 SVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDN 419 (640)
T ss_dssp SHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTS
T ss_pred chhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCCc
Confidence 999999998884 3589999999999998876667776552 4667777777788875 344432 332 46789999
Q ss_pred ChHHHhhcCCCeEEEEEeeCC-CC-CCCCCCCCcCCCCH------HHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 002412 310 DFQVYKEVAGLSGLDFAYTDK-SA-VYHTKNDKLDLLKP------GSLQHLGENMLAFLLQAASSTSLPKGN 373 (926)
Q Consensus 310 D~~~F~~~~GIPgld~a~~~~-~~-~YHT~~Dt~d~id~------~slq~~g~~~l~lv~~La~~~~l~~~~ 373 (926)
||.+|.++.|||+++++|..+ .| +|||.+||+++++. ..++.+++.+..++.+|++++.+|-+.
T Consensus 420 D~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~ 491 (640)
T 3kas_A 420 AAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDY 491 (640)
T ss_dssp THHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCT
T ss_pred chHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 999999889999999999865 34 59999999998764 467888999999999999999998653
No 11
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.95 E-value=3.7e-28 Score=292.52 Aligned_cols=208 Identities=20% Similarity=0.248 Sum_probs=174.3
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHH---ccCCCCccEEEEEeCCcCCC
Q 002412 160 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQ---WAHGFKNAVIFLFNTGEEEG 236 (926)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~Flf~~~EE~g 236 (926)
....||+++++|+ +.++++|+++||+|||+ +||.||++|+|++||++|.|.+ .+++|+|+|+|++|++||.|
T Consensus 310 ~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~G 384 (707)
T 3fed_A 310 TRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFG 384 (707)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred EEEEEEEEEEeCC---CCCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCcccc
Confidence 4678999999996 34678999999999997 7999999999999999999986 46789999999999999999
Q ss_pred CcchhHHhhcCC--ccCCceEEEEeccCCCCCCcceeecCC-ChhHHHHHHHHccCCCC----cchhhhhcc--------
Q 002412 237 LNGAHSFVTQHP--WSTTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSG----QVTAQDLFA-------- 301 (926)
Q Consensus 237 l~GS~~f~~~h~--~~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~~~a~~p~~----~~l~~~~f~-------- 301 (926)
+.||+.|+++|+ +.+++.++||+|++|.++....++++| ..++++.+.+.+++|.+ .++.+..++
T Consensus 385 l~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~ 464 (707)
T 3fed_A 385 LLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENK 464 (707)
T ss_dssp SHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEE
T ss_pred chhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhccccccc
Confidence 999999998886 568999999999999887777777665 35677777777889975 455544443
Q ss_pred ----cCCCCCCCChHHHhhcCCCeEEEEEeeCC-------CC-CCCCCCCCcCCCCH------HHHHHHHHHHHHHHHHH
Q 002412 302 ----SGAITSATDFQVYKEVAGLSGLDFAYTDK-------SA-VYHTKNDKLDLLKP------GSLQHLGENMLAFLLQA 363 (926)
Q Consensus 302 ----~g~ips~TD~~~F~~~~GIPgld~a~~~~-------~~-~YHT~~Dt~d~id~------~slq~~g~~~l~lv~~L 363 (926)
.+.+.++|||.+|.++.|||+++++|..+ .| +|||.+||+++++. ...+.+++....++.+|
T Consensus 465 ~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~L 544 (707)
T 3fed_A 465 NLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYEL 544 (707)
T ss_dssp EEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 12345899999999989999999999854 33 79999999987654 45667899999999999
Q ss_pred HcCCCCCCC
Q 002412 364 ASSTSLPKG 372 (926)
Q Consensus 364 a~~~~l~~~ 372 (926)
|+++.+|.+
T Consensus 545 a~~~vlP~~ 553 (707)
T 3fed_A 545 VDSKIIPFN 553 (707)
T ss_dssp HHCSSCCCC
T ss_pred hCCccCCCC
Confidence 999998854
No 12
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.94 E-value=2.2e-26 Score=265.58 Aligned_cols=199 Identities=18% Similarity=0.187 Sum_probs=159.0
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcch
Q 002412 161 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGA 240 (926)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS 240 (926)
...||+++++|+ +.+++.|+++||+|||+.++||.||++|++++||++|.|.+.+.+|+|+|+|+|+++||.|+.||
T Consensus 234 ~~~Nvi~~~~g~---~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs 310 (444)
T 3iib_A 234 TSYNVIAEVKGS---TKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGG 310 (444)
T ss_dssp EEEEEEEEECCS---TEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHH
T ss_pred eeEEEEEEEeCC---CCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCH
Confidence 668999999986 23578999999999999999999999999999999999998888899999999999999999999
Q ss_pred hHHhhcCCc-cCCceEEEEeccCCCCCCcceeecCC-ChhHHHHHHHHccCCCCcchhhhhcccCCCCCCCChHHHhhcC
Q 002412 241 HSFVTQHPW-STTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVA 318 (926)
Q Consensus 241 ~~f~~~h~~-~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~ 318 (926)
+.|+++|.. .+++.+++|+|+.|.......++..+ ...+++.+.+.. ++.+... ......++|||.+|.+ .
T Consensus 311 ~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~-----~~~~~~~~SD~~~f~~-~ 383 (444)
T 3iib_A 311 KTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA-----GNNKASGGPDVSMLPA-L 383 (444)
T ss_dssp HHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE-----CCSCCCCCGGGTTSGG-G
T ss_pred HHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc-----ccCCCCCCCccHHHHH-C
Confidence 999988854 36789999999875332222233222 235555555432 2333211 1123457899999998 8
Q ss_pred CCeEEEEEeeCC--CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q 002412 319 GLSGLDFAYTDK--SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSL 369 (926)
Q Consensus 319 GIPgld~a~~~~--~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~~~~l 369 (926)
|||++++..... ..+|||+.||++++|++.|+++++.+..++..||++++.
T Consensus 384 GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 384 GVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp TCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999986433 248999999999999999999999999999999998764
No 13
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.92 E-value=7.9e-25 Score=250.96 Aligned_cols=198 Identities=23% Similarity=0.278 Sum_probs=155.4
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchh
Q 002412 162 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAH 241 (926)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~ 241 (926)
..||+++++|+.....+++.|+++||+|||+.+|||.||++||+++||++|.|.+ .+++++|+|+++++||.|+.||+
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~--~~~~~~i~~~~~~~EE~g~~Gs~ 280 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSK--LKTDTELRFITFGAEENGLIGSK 280 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEESSSTTTSHHHH
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhc--cCCCceEEEEEECCccccchhHH
Confidence 5799999998621012678999999999999999999999999999999999987 35789999999999999999999
Q ss_pred HHhhcCC--ccCCceEEEEeccCCCCCCcc-eeecCC-ChhHHHHH----HHHccCCCCcchhhhhcccCCCCCCCChHH
Q 002412 242 SFVTQHP--WSTTIRVAIDLEAMGIGGKSG-LFQAGP-HPWAVENF----AAAAKYPSGQVTAQDLFASGAITSATDFQV 313 (926)
Q Consensus 242 ~f~~~h~--~~~~v~a~iNLD~~G~gG~~~-lfq~g~-~~~li~~~----~~~a~~p~~~~l~~~~f~~g~ips~TD~~~ 313 (926)
.|+++++ +.+++.++||+|++|..+... .+..+. .+.+...+ .+....| . .. ....+|||.+
T Consensus 281 ~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~-----~~~~~SD~~~ 350 (421)
T 2ek8_A 281 KYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L---PY-----GQEGRSDHES 350 (421)
T ss_dssp HHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C---CE-----EECCSSTHHH
T ss_pred HHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C---CC-----CCCCCCccHH
Confidence 9998775 356899999999999866522 223222 12222222 1111222 0 00 1235799999
Q ss_pred HhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 002412 314 YKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKG 372 (926)
Q Consensus 314 F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~~~~l~~~ 372 (926)
|.+ .|||++.+......++|||++||+++++++.++++++.+..++..|++.+.+|-+
T Consensus 351 F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 351 FHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIE 408 (421)
T ss_dssp HHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 997 9999998775545568999999999999999999999999999999999988754
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.82 E-value=2.9e-19 Score=200.02 Aligned_cols=178 Identities=17% Similarity=0.177 Sum_probs=136.6
Q ss_pred EcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcCC
Q 002412 169 IQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (926)
Q Consensus 169 i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~ 248 (926)
++|+ +++.|+++||+|+.. +|+||+||+|+++|++|+|++ .+++++++|+|++ |..||..|+++|+
T Consensus 174 ipG~-----t~~~IllsaH~cHP~---~ANDNaSG~a~lleLar~l~~--~~~~~t~rFvf~p----g~iGS~~yl~~~~ 239 (435)
T 3k9t_A 174 IRGE-----LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSK--LKTKYSYRFLFAP----ETIGSITWLSRNE 239 (435)
T ss_dssp ECCS-----SSCEEEEEEECCCCS---CTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEEC----TTHHHHHHHHHCG
T ss_pred ecCC-----CCCEEEEEEEcCCCC---CCCccchHHHHHHHHHHHHhc--CCCCceEEEEEcC----ccHHHHHHHHhCh
Confidence 5775 468999999999843 699999999999999999986 4589999999998 6899999998886
Q ss_pred c-cCCceEEEEeccCCCCCCcceeecCC-ChhHHHHHHH-HccCCCCcchhhhhcccCCCCCCCChHHHhhcCC--CeEE
Q 002412 249 W-STTIRVAIDLEAMGIGGKSGLFQAGP-HPWAVENFAA-AAKYPSGQVTAQDLFASGAITSATDFQVYKEVAG--LSGL 323 (926)
Q Consensus 249 ~-~~~v~a~iNLD~~G~gG~~~lfq~g~-~~~li~~~~~-~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~G--IPgl 323 (926)
. .+++++.+||||+|.++... +..+. .+++++...+ +.++..... ..+ ...|.++||++|.+ .| ||..
T Consensus 240 ~~l~~i~a~lnLDmVGd~~~~~-y~~sr~g~~~~d~~~~~vl~~~~~~~---~~~--~f~~~GSDh~qF~s-pG~dIPv~ 312 (435)
T 3k9t_A 240 DKLKNIKMGLVATCVGDAGIKN-YKRTKFGDAEIDKIVEKVLMHCGSEY---YVA--DFFPWGSDERQFSS-PGINLSVG 312 (435)
T ss_dssp GGGGGEEEEEECCSCCSSSCEE-EECCTTSSSHHHHHHHHHHHHSSSCE---EEE--CCCSCSSTHHHHTS-TTTCCCEE
T ss_pred HhhhceEEEEEEEEecCCCCce-eecCCCCChHHHHHHHHHHhhcCCCC---cee--cCCCCCCcchhHhh-CCCCCCEE
Confidence 4 46999999999999877533 44333 2344433322 222211000 011 12356799999998 88 9999
Q ss_pred EEEeeCC-CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHcCC
Q 002412 324 DFAYTDK-SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASST 367 (926)
Q Consensus 324 d~a~~~~-~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~~~ 367 (926)
.+..... .+.|||+.||+++|++++|+...+.++..+..|-+..
T Consensus 313 ~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 313 SLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp EEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 8876332 4589999999999999999999999999999998754
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.67 E-value=6.4e-16 Score=166.56 Aligned_cols=232 Identities=17% Similarity=0.143 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002412 87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 166 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi 166 (926)
+++.+.+++|.++ | ..|.++..+.+||.++|+++|. +++.+ .. .+..|++
T Consensus 6 ~~~~~~l~~lv~i-p--s~s~~e~~~~~~l~~~l~~~G~------~~~~~--~~-------------------~~~~nv~ 55 (269)
T 4h2k_A 6 EKVVSLAQDLIRR-P--SISPNDEGCQQIIAERLEKLGF------QIEWM--PF-------------------NDTLNLW 55 (269)
T ss_dssp HHHHHHHHHHHTS-C--CBTTCCTTHHHHHHHHHHTTTC------EEEEC--CB-------------------TTBCEEE
T ss_pred HHHHHHHHHHhCC-C--CCCCCcHHHHHHHHHHHHHcCC------eEEEE--Ec-------------------CCceEEE
Confidence 5678889999986 3 3343445689999999999983 33321 10 1357999
Q ss_pred EEEcCCCCCcCCCCEEEEeeecccccCC---------------------CCCCCchhHHHHHHHHHHHHHHccCCCCccE
Q 002412 167 LRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAV 225 (926)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (926)
+++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++|++++.|.+.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i 129 (269)
T 4h2k_A 56 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 129 (269)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccE
Confidence 988 53 35689999999999853 6999999999999999999998776788999
Q ss_pred EEEEeCCcCCCCc-chhHHhhcCC-ccCCceEEEEeccCCCC--CCcc-eeecC----C-ChhHHHHHHHHccCCCCcch
Q 002412 226 IFLFNTGEEEGLN-GAHSFVTQHP-WSTTIRVAIDLEAMGIG--GKSG-LFQAG----P-HPWAVENFAAAAKYPSGQVT 295 (926)
Q Consensus 226 ~Flf~~~EE~gl~-GS~~f~~~h~-~~~~v~a~iNLD~~G~g--G~~~-lfq~g----~-~~~li~~~~~~a~~p~~~~l 295 (926)
+|+|+.+||.|.. ||+.+++... ...+..++|+.|..+.. |... .-+.| + +..+++...++++.-.+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~gi~- 208 (269)
T 4h2k_A 130 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIGIT- 208 (269)
T ss_dssp EEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHSCC-
T ss_pred EEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhCCC-
Confidence 9999999999984 9999886432 13567899999976431 1111 00111 1 2245555544332101100
Q ss_pred hhhhcccCCCCCCCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHc
Q 002412 296 AQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 365 (926)
Q Consensus 296 ~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~ 365 (926)
.... ....+||.+.+.. .|+|.+.+.-.. ..+||+.+ .++.+.+++..+.+..+++.|.+
T Consensus 209 -~~~~---~~gggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 209 -PKAE---TGGGTSDGRFIAL-MGAEVVEFGPLN--STIHKVNE---CVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp -CEEE---CC--CHHHHHHHT-TTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHC-
T ss_pred -CEEe---cCCCCchHHHHHh-hCCCEEEEEeCC--CCCcCCcc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 0111 1235899999986 899999875443 34699985 77899999999999999988765
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.67 E-value=3.9e-16 Score=168.07 Aligned_cols=232 Identities=17% Similarity=0.144 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002412 87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 166 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi 166 (926)
+++.+.+++|.++ |.+ |..+..+.+||.++|+++|. +++... . .+..|++
T Consensus 6 ~~~~~~l~~lv~i-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~~--~-------------------~~~~nv~ 55 (268)
T 3t68_A 6 SPVLALAKELISR-QSV--TPADAGCQDLMIERLKALGF------EIESMV--F-------------------EDTTNFW 55 (268)
T ss_dssp CHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHHTTC------EECCCE--E-------------------TTEEC-C
T ss_pred HHHHHHHHHHhCC-CCC--CCCchHHHHHHHHHHHHCCC------eEEEEe--c-------------------CCccEEE
Confidence 5788999999986 333 33344689999999999983 222110 0 1347999
Q ss_pred EEEcCCCCCcCCCCEEEEeeecccccCC---------------------CCCCCchhHHHHHHHHHHHHHHccCCCCccE
Q 002412 167 LRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAHGFKNAV 225 (926)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (926)
+++ |+ ..+.|++.+|+|+||.+ +|+.||++|++++|++++.|.+.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v 129 (268)
T 3t68_A 56 ARR-GT-----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSI 129 (268)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 988 53 35689999999999853 6999999999999999999988776788999
Q ss_pred EEEEeCCcCCCC-cchhHHhhcCC-ccCCceEEEEeccCCCC--CCcc-eeecC-----CChhHHHHHHHHccCCCCcch
Q 002412 226 IFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAIDLEAMGIG--GKSG-LFQAG-----PHPWAVENFAAAAKYPSGQVT 295 (926)
Q Consensus 226 ~Flf~~~EE~gl-~GS~~f~~~h~-~~~~v~a~iNLD~~G~g--G~~~-lfq~g-----~~~~li~~~~~~a~~p~~~~l 295 (926)
+|+|+.+||.|. .||+.+++... ...+..++|++|..+.. |... .-+.| ++..+++...++++.-.+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~- 208 (268)
T 3t68_A 130 GFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQA- 208 (268)
T ss_dssp EEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSC-
T ss_pred EEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCC-
Confidence 999999999988 59999986432 23567899999976532 1111 00111 12335555544332101110
Q ss_pred hhhhcccCCCCCCCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHc
Q 002412 296 AQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 365 (926)
Q Consensus 296 ~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~ 365 (926)
.... ....+||+..|.+ .|+|++.+.... ..+||+.+ .++...+++..+.+.++++.|.+
T Consensus 209 -~~~~---~sgggtD~~~~~~-~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 209 -PALL---TTGGTSDGRFIAQ-MGAQVVELGPVN--ATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp -CEEE---SSCCCHHHHHHHH-HTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred -cEEe---cCccccHHHHHHh-cCCCEEEEeeCC--CCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 0111 1235899999997 899988765432 35699985 66788899999999999988764
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.60 E-value=9.2e-15 Score=150.56 Aligned_cols=146 Identities=20% Similarity=0.221 Sum_probs=111.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002412 83 GFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 162 (926)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~ 162 (926)
.++.+++.+.|++|.++ |.+.+++++.++++|+.+++++++. +++.+.... +.
T Consensus 6 ~~~~~~~~~~l~~lv~i-~s~s~~~~e~~~~~~l~~~l~~~g~------~~~~~~~~~--------------------g~ 58 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRI-RTVQPKPDYGAAVAFFEETARQLGL------GCQKVEVAP--------------------GY 58 (198)
T ss_dssp -CCCCHHHHHHHHHHTS-CCBTTSCCHHHHHHHHHHHHHHHTC------EEEEEEEET--------------------TE
T ss_pred chhHHHHHHHHHHHhcC-CCCCCCcCHHHHHHHHHHHHHHCCC------eEEEEEcCC--------------------CC
Confidence 46778899999999997 4444444567899999999999983 344332110 34
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEeeecccccC---------------------CCCCCCchhHHHHHHHHHHHHHHccCCC
Q 002412 163 NHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGF 221 (926)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p 221 (926)
.|++++++|+ .++.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.++
T Consensus 59 ~~~i~~~~g~---~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~ 135 (198)
T 1q7l_A 59 VVTVLTWPGT---NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRF 135 (198)
T ss_dssp EEEEEEECCS---STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEEccC---CCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCC
Confidence 6999999875 223578999999999974 3789999999999999999999887788
Q ss_pred CccEEEEEeCCcCCC-CcchhHHhhcCCcc-CCceEEEE
Q 002412 222 KNAVIFLFNTGEEEG-LNGAHSFVTQHPWS-TTIRVAID 258 (926)
Q Consensus 222 ~~~I~Flf~~~EE~g-l~GS~~f~~~h~~~-~~v~a~iN 258 (926)
+++|+|+|+.+||.| +.|++.+++++... .+..++++
T Consensus 136 ~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 136 PRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp SSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred CCCEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 999999999999997 79999998543221 23445553
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.58 E-value=2.6e-14 Score=161.14 Aligned_cols=225 Identities=18% Similarity=0.216 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002412 87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 166 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi 166 (926)
+++.+.|++|+++ |.+.|.+ +++++||.+++++++. +++.| +..|++
T Consensus 7 ~~~~~~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnli 53 (373)
T 1vhe_A 7 DETLTMLKDLTDA-KGIPGNE--REVRQVMKSYIEPFAD------EVTTD------------------------RLGSLI 53 (373)
T ss_dssp CHHHHHHHHHHHS-CCCTTCC--HHHHHHHHHHHGGGCS------EEEEC------------------------TTCCEE
T ss_pred HHHHHHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEc------------------------CCCcEE
Confidence 3678899999997 5555543 4789999999999873 33332 235899
Q ss_pred EEEcCCCCCcCCCCEEEEeeeccccc------------------------------------------------------
Q 002412 167 LRIQPKYASEAAENAILVSSHIDTVF------------------------------------------------------ 192 (926)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~------------------------------------------------------ 192 (926)
++++|+ ...+.|++.||+|+|+
T Consensus 54 a~~~g~----~~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~ 129 (373)
T 1vhe_A 54 AKKTGA----ENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPE 129 (373)
T ss_dssp EEEESS----TTSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTT
T ss_pred EEecCC----CCCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchh
Confidence 998774 2346899999999997
Q ss_pred ---------------------------CCCC---------------------CCCchhHHHHHHHHHHHHHHccCCCCcc
Q 002412 193 ---------------------------AAEG---------------------AGDCSSCVAVMLELARAMSQWAHGFKNA 224 (926)
Q Consensus 193 ---------------------------~spG---------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (926)
..+| +.||++|+|++|++++.|.+.+ ++++
T Consensus 130 ~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~ 207 (373)
T 1vhe_A 130 ARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNI 207 (373)
T ss_dssp TTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSE
T ss_pred hccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCce
Confidence 1123 8999999999999999998753 6789
Q ss_pred EEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCCCCC----------------Ccce-eecC--CChhHHHHHHH
Q 002412 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG----------------KSGL-FQAG--PHPWAVENFAA 285 (926)
Q Consensus 225 I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gG----------------~~~l-fq~g--~~~~li~~~~~ 285 (926)
|+|+|+++||.|+.|++.+... .+...+|++|+.+.++ +..- +..+ .++.+++.+.+
T Consensus 208 v~~~~~~~EE~G~~G~~~~~~~----~~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~ 283 (373)
T 1vhe_A 208 VYGVGTVQEEVGLRGAKTAAHT----IQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVA 283 (373)
T ss_dssp EEEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHH
T ss_pred EEEEEECCcccChhhHHHHhcc----cCCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHH
Confidence 9999999999999999988632 2346889999866422 1110 1111 24566665554
Q ss_pred HccCCCCcchhhhhcccCCCCCCCChHHH--hhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 002412 286 AAKYPSGQVTAQDLFASGAITSATDFQVY--KEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQA 363 (926)
Q Consensus 286 ~a~~p~~~~l~~~~f~~g~ips~TD~~~F--~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~L 363 (926)
+++. .+.....+.. .+.+||...| .. .|+|.+++.-. . ..+||+. +.++.+.+++..+.+..++..+
T Consensus 284 ~a~~-~gi~~~~~~~----~~ggtDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l 352 (373)
T 1vhe_A 284 TAEE-AGIPYQFDAI----AGGGTDSGAIHLTA-NGVPALSITIA-T-RYIHTHA---AMLHRDDYENAVKLITEVIKKL 352 (373)
T ss_dssp HHHH-HTCCCEEEEE----TTCCCTHHHHTTST-TCCCEEEEEEE-E-BSTTSSC---EEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHH-cCCCeEEecC----CCCCccHHHHHHhC-CCCcEEEEccc-c-ccCCChh---heecHHHHHHHHHHHHHHHHHh
Confidence 4321 1111100011 2468999999 44 79999987543 2 2479985 6778999999999999999988
Q ss_pred Hc
Q 002412 364 AS 365 (926)
Q Consensus 364 a~ 365 (926)
++
T Consensus 353 ~~ 354 (373)
T 1vhe_A 353 DR 354 (373)
T ss_dssp CH
T ss_pred cH
Confidence 65
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.56 E-value=3e-14 Score=159.32 Aligned_cols=221 Identities=18% Similarity=0.188 Sum_probs=155.7
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEE
Q 002412 89 AIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLR 168 (926)
Q Consensus 89 A~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~~ 168 (926)
..+.|++|+++ |.+.|.++ +++++||.+++++++. +++.| +..|++++
T Consensus 8 ~~~~l~~L~~~-~s~sg~e~-~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~ 55 (353)
T 1y0y_A 8 DYELLKKVVEA-PGVSGYEF-LGIRDVVIEEIKDYVD------EVKVD------------------------KLGNVIAH 55 (353)
T ss_dssp CHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHGGGSS------EEEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHhC-CCCCccch-HHHHHHHHHHHHhhCC------eEEEc------------------------CCCCEEEE
Confidence 46789999996 55666553 5789999999999873 33332 34699998
Q ss_pred EcCCCCCcCCCCEEEEeeeccccc--------------------------------------------------------
Q 002412 169 IQPKYASEAAENAILVSSHIDTVF-------------------------------------------------------- 192 (926)
Q Consensus 169 i~g~~~~~~~~~~VLl~AH~DSv~-------------------------------------------------------- 192 (926)
++|+ ++.|+++||+|+|+
T Consensus 56 ~~g~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~ 129 (353)
T 1y0y_A 56 KKGE------GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPED 129 (353)
T ss_dssp ECCS------SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC----------
T ss_pred ecCC------CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhh
Confidence 8652 46899999999995
Q ss_pred --------------------------CCCC--------------------CCCchhHHHHHHHHHHHHHHccCCCCccEE
Q 002412 193 --------------------------AAEG--------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVI 226 (926)
Q Consensus 193 --------------------------~spG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (926)
..+| |.||++|++++|++++.|.+ ++++|+
T Consensus 130 ~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~ 205 (353)
T 1y0y_A 130 RKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVY 205 (353)
T ss_dssp ---CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEE
T ss_pred ccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEE
Confidence 2345 69999999999999999864 678999
Q ss_pred EEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCCCCCCc----------------cee---ecCCChhHHHHHHHHc
Q 002412 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKS----------------GLF---QAGPHPWAVENFAAAA 287 (926)
Q Consensus 227 Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gG~~----------------~lf---q~g~~~~li~~~~~~a 287 (926)
|+|+++||.|+.||+.+... .+...+|++|+.+.++.. +-+ ....++.+++.+.+++
T Consensus 206 ~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a 281 (353)
T 1y0y_A 206 FVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELA 281 (353)
T ss_dssp EEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHH
T ss_pred EEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHH
Confidence 99999999999999988732 235689999987643210 000 0112456666665543
Q ss_pred cCCCCcchhhhhcccCCCCCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHc
Q 002412 288 KYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 365 (926)
Q Consensus 288 ~~p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~ 365 (926)
+.- +.....+. ..+.+||...|.. ..|+|.+++.-. . ..+||+. |.++.+.+.+..+.+..++..+.+
T Consensus 282 ~~~-gi~~~~~~----~~~ggsDa~~~~~~~~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 282 KKH-EIPYQLEI----LLGGGTDAGAIHLTKAGVPTGALSVP-A-RYIHSNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp HHT-TCCEEEEE----CSSCCCTHHHHTTSTTCCCEEEEEEE-E-BSCSSSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred HHc-CCCEEEee----cCCCCchHHHHHHhCCCCcEEEEccc-c-cccCCHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 221 21111001 1346899999942 279999987643 2 3589975 667788999999999999998865
No 20
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.55 E-value=3.8e-14 Score=156.95 Aligned_cols=148 Identities=18% Similarity=0.198 Sum_probs=103.9
Q ss_pred CCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCCCC-----------
Q 002412 197 AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIG----------- 265 (926)
Q Consensus 197 A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~g----------- 265 (926)
+.||++|++++|++++.|.+.+ ++++|.|+|+++||.|+.|++.++.. .+...+|++|+.+..
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6999999999999999998754 67999999999999999999998732 245689999987653
Q ss_pred CCccee---ecCCChhHHHHHHHHccCCCCcchhhhhcccCCCCCCCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcC
Q 002412 266 GKSGLF---QAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLD 342 (926)
Q Consensus 266 G~~~lf---q~g~~~~li~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d 342 (926)
|..+-+ ....++.+++.+.++++. .+.. ++....+.+||...|.. |+|.+++.-. ...+||+. |
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~-~gi~-----~~~~~~~ggtDa~~~~~--GiPtv~lg~~--~~~~Hs~~---E 311 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEK-NGIE-----IQIGVTGGGTDASAFQD--RSKTLALSVP--IKYLHSEV---E 311 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHH-TTCC-----CEEEECSSCCGGGGGTT--TSEEEEEECE--EBSCSSTT---C
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHH-cCCC-----eEEecCCCCchHHHHHc--CCCEEEEcCC--cCCCCChh---h
Confidence 211111 111255666666554322 1211 11112347899999986 9999986532 23589975 5
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 002412 343 LLKPGSLQHLGENMLAFLLQA 363 (926)
Q Consensus 343 ~id~~slq~~g~~~l~lv~~L 363 (926)
+++...+++..+.+..++..+
T Consensus 312 ~v~~~dl~~~~~ll~~~~~~l 332 (332)
T 2wyr_A 312 TLHLNDLEKLVKLIEALAFEL 332 (332)
T ss_dssp EEEHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHHHHHHHhC
Confidence 677888999998888887653
No 21
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.54 E-value=4.5e-14 Score=157.70 Aligned_cols=223 Identities=16% Similarity=0.254 Sum_probs=144.3
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002412 85 SEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 164 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~N 164 (926)
+.+++.+.|++|+++ |.+.|.+ +.+++|+.+++++++. +++.| +..|
T Consensus 4 ~~~~~~~~l~~lv~i-~s~s~~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gn 50 (349)
T 2gre_A 4 HTKETMELIKELVSI-PSPSGNT--AKIINFIENYVSEWNV------ETKRN------------------------NKGA 50 (349)
T ss_dssp HHHHHHHHHHHHHTS-CCBTTCC--HHHHHHHHHHTTTSSS------EEEEC------------------------SSSC
T ss_pred cHHHHHHHHHHHHhC-CCCCccH--HHHHHHHHHHHHHhCC------EEEEe------------------------cCCc
Confidence 467899999999997 4444433 4688999999998873 33332 2358
Q ss_pred EEEEEcCCCCCcCCCCEEEEeeeccccc----------------C-----------------------------------
Q 002412 165 IVLRIQPKYASEAAENAILVSSHIDTVF----------------A----------------------------------- 193 (926)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~----------------~----------------------------------- 193 (926)
++++++|+ ...+.|++.+|+|+|+ .
T Consensus 51 l~a~~~g~----~~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h 126 (349)
T 2gre_A 51 LILTVKGK----NDAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVH 126 (349)
T ss_dssp EEEEECCS----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-----
T ss_pred EEEEecCC----CCCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCcc
Confidence 99999764 2346799999999983 0
Q ss_pred ----------------------------------CC---------------C-----CCCchhHHHHHHHHHHHHHHccC
Q 002412 194 ----------------------------------AE---------------G-----AGDCSSCVAVMLELARAMSQWAH 219 (926)
Q Consensus 194 ----------------------------------sp---------------G-----A~Dd~sgva~~LE~ar~L~~~~~ 219 (926)
.+ | +.||++|++++|++++.+.+.+.
T Consensus 127 ~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~ 206 (349)
T 2gre_A 127 VYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENV 206 (349)
T ss_dssp --------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTC
T ss_pred ccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccC
Confidence 00 1 69999999999999999998777
Q ss_pred CCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCCCCC-C-----cc-e-e--ecCC-ChhHHHHHHHHcc
Q 002412 220 GFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG-K-----SG-L-F--QAGP-HPWAVENFAAAAK 288 (926)
Q Consensus 220 ~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gG-~-----~~-l-f--q~g~-~~~li~~~~~~a~ 288 (926)
+++++|+|+|+++||.|+.|++.+ ..+...+|++|+.+.++ + .. + + +.++ ++.+.+.+.+.++
T Consensus 207 ~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a~ 280 (349)
T 2gre_A 207 TLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAK 280 (349)
T ss_dssp CCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHH
T ss_pred CCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHHH
Confidence 788999999999999999999976 24578999999987653 2 11 1 1 1122 5666666655432
Q ss_pred CCCCcchhhhhcccCCCCCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 002412 289 YPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLL 361 (926)
Q Consensus 289 ~p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~ 361 (926)
. .+.....+.. ...+||+.+|.. ..|+|.+++. ... ..+|| .+.++...+.+..+.+..++.
T Consensus 281 ~-~gi~~q~~~~----~ggGsDa~~~~~~~~GiPt~~lg-~~~-~~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 281 T-NHIEYKVDIY----PYYGSDASAAIRAGFDVKHALIG-AGI-DSSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp H-HTCCEEEEEC----SCC--------CCSSSCEEEEEE-ECC-BSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred H-cCCCcEEecc----CCCCccHHHHHHhCCCCcEEEec-cCc-ccccc----ceeccHHHHHHHHHHHHHHHh
Confidence 1 1111111111 235799988842 3699999764 333 34787 567778888888887777665
No 22
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.46 E-value=2.3e-13 Score=151.35 Aligned_cols=218 Identities=18% Similarity=0.244 Sum_probs=136.5
Q ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEEcC
Q 002412 92 HVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQP 171 (926)
Q Consensus 92 ~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~~i~g 171 (926)
.|++|+++ |.+.|.+ +++++|+.+++++++. +++.| +..|++++++|
T Consensus 3 ~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~~~g 49 (340)
T 2fvg_A 3 YLKELSMM-PGVSGDE--GKVRDFIKSKIEGLVD------NLYTD------------------------VLGNLIALKRG 49 (340)
T ss_dssp CHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEEEEECC
T ss_pred HHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------CCCcEEEEecC
Confidence 47888886 5555544 4689999999999873 33332 23599999876
Q ss_pred CCCCcCCCCEEEEeeeccccc-----------------------------------------------------------
Q 002412 172 KYASEAAENAILVSSHIDTVF----------------------------------------------------------- 192 (926)
Q Consensus 172 ~~~~~~~~~~VLl~AH~DSv~----------------------------------------------------------- 192 (926)
+ .+.+.|++.||+|+|+
T Consensus 50 ~----~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~ 125 (340)
T 2fvg_A 50 R----DSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFEN 125 (340)
T ss_dssp S----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTT
T ss_pred C----CCCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCccc
Confidence 4 2346799999999998
Q ss_pred ----------------CCCC-------------------CCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCC
Q 002412 193 ----------------AAEG-------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGL 237 (926)
Q Consensus 193 ----------------~spG-------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl 237 (926)
..+| +.||++|++++|++++.+. +++++|+|+|+++||.|+
T Consensus 126 l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~ 201 (340)
T 2fvg_A 126 LRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGL 201 (340)
T ss_dssp EEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC---
T ss_pred EEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccch
Confidence 1114 6999999999999999886 478899999999999999
Q ss_pred cchhHHhhcCCccCCceEEEEeccCCCC---CCc-----------ceee---cC--CChhHHHHHHHHccCCCCcchhhh
Q 002412 238 NGAHSFVTQHPWSTTIRVAIDLEAMGIG---GKS-----------GLFQ---AG--PHPWAVENFAAAAKYPSGQVTAQD 298 (926)
Q Consensus 238 ~GS~~f~~~h~~~~~v~a~iNLD~~G~g---G~~-----------~lfq---~g--~~~~li~~~~~~a~~p~~~~l~~~ 298 (926)
.|++.++.. .+...+|++|+.+.. |+. .+.. .+ .++.+.+.+.+.++. .+..
T Consensus 202 ~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~-~gi~---- 272 (340)
T 2fvg_A 202 RGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKN-NDIP---- 272 (340)
T ss_dssp --CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHH-TTCC----
T ss_pred hhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCC----
Confidence 999998853 234678999876432 211 0111 11 145555555443321 1111
Q ss_pred hcccC-CCCCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHc
Q 002412 299 LFASG-AITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 365 (926)
Q Consensus 299 ~f~~g-~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~ 365 (926)
++.. ..+.+||...|.. ..|+|.+.+.-- .. .+||+. |+++.+.+++..+.+..+++.+.+
T Consensus 273 -~~~~~~~~ggtDa~~~~~~~~GiP~v~~g~~-~~-~~Hs~~---E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 273 -FQMKRRTAGGTDAGRYARTAYGVPAGVISTP-AR-YIHSPN---SIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp -CEECCCC-------------CCSCEEEEEEE-EE-ESSTTC---EEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred -eEEEecCCCCccHHHHHhhCCCCcEEEeccc-cc-ccCChh---hcccHHHHHHHHHHHHHHHHhccc
Confidence 1111 1346899999874 269999976532 22 389986 457789999999999999988875
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.41 E-value=2.2e-12 Score=146.67 Aligned_cols=129 Identities=19% Similarity=0.202 Sum_probs=107.2
Q ss_pred CCHHHHHHHHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccc
Q 002412 84 FSEFEAIKHVKALTELGP-------HPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRT 156 (926)
Q Consensus 84 fs~erA~~~L~~L~~igp-------r~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~ 156 (926)
.+.+|+++.|++|++++. |+..|.++.++++||.++|+++|. +++.|
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~------~~~~d-------------------- 55 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGL------FVYED-------------------- 55 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTC------EEEEC--------------------
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCC------EEEEc--------------------
Confidence 367899999999999854 333477888999999999999983 33332
Q ss_pred ccccccceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCC-
Q 002412 157 LIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEE- 235 (926)
Q Consensus 157 ~~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~- 235 (926)
...||+++++|+ .++.+.|++.||+|+||. .|+.|++.|++++|++++.|.+.+.+++++|.|+|+.+||.
T Consensus 56 ----~~gnv~a~~~g~---~~~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~ 127 (408)
T 3n5f_A 56 ----AAGNLIGRKEGT---NPDATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGA 127 (408)
T ss_dssp ----TTCCEEEEECCS---STTSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCT
T ss_pred ----CCCCEEEEecCC---CCCCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcccc
Confidence 235999999885 223689999999999994 68999999999999999999988778899999999999995
Q ss_pred ----CCcchhHHhhc
Q 002412 236 ----GLNGAHSFVTQ 246 (926)
Q Consensus 236 ----gl~GS~~f~~~ 246 (926)
|+.||+.++..
T Consensus 128 ~~~~g~~Gs~~~~~~ 142 (408)
T 3n5f_A 128 RFRFGMIGSRAMAGT 142 (408)
T ss_dssp TTTCCCHHHHHHHTC
T ss_pred ccCCCCcCHHHHHcC
Confidence 78899999843
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.40 E-value=4.8e-12 Score=146.62 Aligned_cols=156 Identities=13% Similarity=0.162 Sum_probs=115.9
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCH----HHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002412 85 SEFEAIKHVKALTELGPHPVGSD----ALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 160 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS~----~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~ 160 (926)
..+++.+.+++|.++ |.+.+.+ +..++++||.++|+++|. +++.+..... ...+ +.. ..
T Consensus 18 ~~~~~~~~l~~l~~~-ps~s~~e~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~~~----~~~~----~~~--~~ 80 (479)
T 2zog_A 18 NQDRYVKKLAEWVAI-QSVSAWPEKRGEIRRMMEVAAADVQRLGG------SVELVDIGKQ----KLPD----GSE--IP 80 (479)
T ss_dssp THHHHHHHHHHHHHS-CCBTTCGGGHHHHHHHHHHHHHHHHHTTC------EEEEECCCEE----ECTT----SCE--EE
T ss_pred hHHHHHHHHHHHhcC-CCccCCcccchHHHHHHHHHHHHHHHcCC------eEEEeecccc----ccCC----Ccc--cC
Confidence 357889999999997 4444443 346899999999999983 3444321000 0000 000 00
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEeeecccccC---------------------CCCCCCchhHHHHHHHHHHHHHHccC
Q 002412 161 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAH 219 (926)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~ 219 (926)
...||++++++. .+.+.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+.
T Consensus 81 ~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~ 156 (479)
T 2zog_A 81 LPPILLGKLGSD----PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ 156 (479)
T ss_dssp CCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEecCC----CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCC
Confidence 127999999653 34578999999999975 37889999999999999999998877
Q ss_pred CCCccEEEEEeCCcCCCCcchhHHhhcCC--ccCCceEEEEecc
Q 002412 220 GFKNAVIFLFNTGEEEGLNGAHSFVTQHP--WSTTIRVAIDLEA 261 (926)
Q Consensus 220 ~p~~~I~Flf~~~EE~gl~GS~~f~~~h~--~~~~v~a~iNLD~ 261 (926)
+++++|+|+|+.+||.|..|++.+++++. +..++.+++++|.
T Consensus 157 ~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 157 EIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp CCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred CCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 88899999999999999999999997764 2346778888885
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.36 E-value=5.8e-12 Score=142.34 Aligned_cols=147 Identities=20% Similarity=0.297 Sum_probs=113.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHH-HHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccc
Q 002412 85 SEFEAIKHVKALTELGPHPVGSDA-LDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLN 163 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS~~-~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~ 163 (926)
..+++.+.|++|.+| |.+.+.++ ..++.+||.++|+++|. +++.+.... . ....
T Consensus 17 ~~~~~~~~l~~lv~i-~s~s~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~~-------~-----------~~~~ 71 (393)
T 1cg2_A 17 EQPAVIKTLEKLVNI-ETGTGDAEGIAAAGNFLEAELKNLGF------TVTRSKSAG-------L-----------VVGD 71 (393)
T ss_dssp HHHHHHHHHHHHHTS-CCBTTCHHHHHHHHHHHHHHHHHTTC------EEEEEECST-------T-----------CCSE
T ss_pred hHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHcCC------eEEEEecCc-------C-----------CCCC
Confidence 357889999999997 44555543 35899999999999983 344331100 0 0135
Q ss_pred eEEEEEcCCCCCcCCCCEEEEeeecccccC-----------------CCCCCCchhHHHHHHHHHHHHHHccCCCCccEE
Q 002412 164 HIVLRIQPKYASEAAENAILVSSHIDTVFA-----------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVI 226 (926)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-----------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (926)
||+++++|+ .++.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+.+++++|+
T Consensus 72 ~v~a~~~g~-----~~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 146 (393)
T 1cg2_A 72 NIVGKIKGR-----GGKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTIT 146 (393)
T ss_dssp EEEEEEECS-----SCCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred eEEEEECCC-----CCceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 999999864 1367999999999974 389999999999999999999987777777999
Q ss_pred EEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCC
Q 002412 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 263 (926)
Q Consensus 227 Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (926)
|+|..+||.|..|++.+++++. .++.+++++|..+
T Consensus 147 ~~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 147 VLFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp EEEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EEEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 9999999999999999986432 3467788888653
No 26
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.30 E-value=2.3e-11 Score=135.94 Aligned_cols=135 Identities=22% Similarity=0.251 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002412 86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 165 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NV 165 (926)
.++..+.+++|.++ |.+.+ ++.++++|+.++++++|. +++.+ ..|+
T Consensus 10 ~~~~~~~~~~l~~~-ps~s~--~e~~~~~~l~~~l~~~g~------~~~~~-------------------------~~nv 55 (356)
T 3ct9_A 10 TAEAVSLLKSLISI-PSISR--EETQAADFLQNYIEAEGM------QTGRK-------------------------GNNV 55 (356)
T ss_dssp HHHHHHHHHHHHTS-CCBTT--CCHHHHHHHHHHHHHTTC------CEEEE-------------------------TTEE
T ss_pred HHHHHHHHHHHhcC-CCCCC--ChHHHHHHHHHHHHHCCC------eEEEE-------------------------eeeE
Confidence 45788899999986 44433 334788999999999983 33322 2699
Q ss_pred EEEEcCCCCCcCCCCEEEEeeecccccC-------------------CCCCCCchhHHHHHHHHHHHHHHccCCCCccEE
Q 002412 166 VLRIQPKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVI 226 (926)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (926)
+++++|+ +.+.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+ ++++|+
T Consensus 56 ~a~~~g~---~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~ 130 (356)
T 3ct9_A 56 WCLSPMF---DLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLI 130 (356)
T ss_dssp EEECSSC---CTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEE
T ss_pred EEEEecC---CCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEE
Confidence 9999873 134578999999999975 4788899999999999999999865 789999
Q ss_pred EEEeCCcCC-CCcchhHHhhcCCccCCceEEEEeccC
Q 002412 227 FLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEAM 262 (926)
Q Consensus 227 Flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (926)
|+|+.+||. |+.|++.++++.. ++.+++++|..
T Consensus 131 ~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 131 YLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp EEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 999999998 8999999997652 34567777754
No 27
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.29 E-value=1e-11 Score=142.36 Aligned_cols=140 Identities=14% Similarity=0.159 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHhcCCCCCC--------CHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccc
Q 002412 86 EFEAIKHVKALTELGPHPVG--------SDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTL 157 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~vG--------S~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~ 157 (926)
.+++++.|++|++|. .+.+ ++++.++++||.++++++|.+ ++++|
T Consensus 26 ~~~~~~~l~~lv~i~-s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~-----~~~~d--------------------- 78 (434)
T 3ife_A 26 KEELIERFTRYVKID-TQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLT-----EVTMD--------------------- 78 (434)
T ss_dssp HHHHHHHHHHHHTSC-CBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCE-----EEEEC---------------------
T ss_pred HHHHHHHHHhhEEee-ccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCc-----eEEEC---------------------
Confidence 367889999999983 3333 346679999999999999831 13332
Q ss_pred cccccceEEEEEcCCCCCcCCCCEEEEeeecccccCC-------------------------------------------
Q 002412 158 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------------------------- 194 (926)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s------------------------------------------- 194 (926)
+..||+++++|+. ..+.+.|++.+|+|+||..
T Consensus 79 ---~~~nv~a~~~g~~--~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~ 153 (434)
T 3ife_A 79 ---DNGYVMATLPANT--DKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHT 153 (434)
T ss_dssp ---TTSCEEEEECCBS--SSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSC
T ss_pred ---CCcEEEEEeCCCC--CCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCc
Confidence 3469999998852 1245789999999999751
Q ss_pred ----CC----CCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEecc
Q 002412 195 ----EG----AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEA 261 (926)
Q Consensus 195 ----pG----A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (926)
+| +.||+.|++++|++++.|.+.+..++++|.|+|..+||.| .|++.+..+ . -++.+++++|.
T Consensus 154 ~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~-~--~~~d~~~~~d~ 224 (434)
T 3ife_A 154 IITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVE-A--FGASFAYMMDG 224 (434)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHH-H--HCCSEEEECCC
T ss_pred EEECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhh-h--cCCCEEEEecC
Confidence 12 4899999999999999999877778999999999999999 898876422 1 14677888874
No 28
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.27 E-value=2.2e-11 Score=141.45 Aligned_cols=145 Identities=14% Similarity=0.204 Sum_probs=110.6
Q ss_pred HH-HHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccc
Q 002412 86 EF-EAIKHVKALTELGPHPVGSD-ALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLN 163 (926)
Q Consensus 86 ~e-rA~~~L~~L~~igpr~vGS~-~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~ 163 (926)
.+ ++.+.+++|.++ |.+.+.+ +..++++||.++++++|. +++.+. . .+..
T Consensus 42 ~~~~~~~~l~~l~~i-ps~s~~e~~~~~~~~~l~~~l~~~G~------~~~~~~--~-------------------~~~~ 93 (481)
T 2pok_A 42 VAQHYFEVLRTLISK-KSVFAQQVGLKEVANYLGEIFKRVGA------EVEIDE--S-------------------YTAP 93 (481)
T ss_dssp HHHHHHHHHHHHHHS-CCCGGGCTTHHHHHHHHHHHHHHTTC------EEEEEC--S-------------------SSSC
T ss_pred hhHHHHHHHHHHHcC-CCcCCCCHHHHHHHHHHHHHHHHcCC------EEEEec--C-------------------CCCc
Confidence 45 788999999997 3333322 346899999999999983 343321 0 0347
Q ss_pred eEEEEEcCCCCCcCCCCEEEEeeecccccC---------------------CCCCCCchhHHHHHHHHHHHHHHccCCCC
Q 002412 164 HIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGFK 222 (926)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~ 222 (926)
||+++++|. ..+.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.+++
T Consensus 94 ~v~a~~~g~---~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~ 170 (481)
T 2pok_A 94 FVMAHFKSS---RPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLP 170 (481)
T ss_dssp EEEEEECCS---STTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCS
T ss_pred EEEEEecCC---CCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 999999864 134678999999999874 37899999999999999999998755788
Q ss_pred ccEEEEEeCCcCCCCcchhHHhhcCCc-cCCceEEEEecc
Q 002412 223 NAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAIDLEA 261 (926)
Q Consensus 223 ~~I~Flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~iNLD~ 261 (926)
++|+|+|+.+||.|..|++.+++++.. .+++.++++.|.
T Consensus 171 ~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~ 210 (481)
T 2pok_A 171 VNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQG 210 (481)
T ss_dssp SEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCC
T ss_pred CCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCC
Confidence 999999999999999999998865421 122566777665
No 29
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.27 E-value=7.5e-11 Score=137.17 Aligned_cols=156 Identities=15% Similarity=0.159 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHhcCCCC--CCCH----HHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccc
Q 002412 86 EFEAIKHVKALTELGPHP--VGSD----ALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIY 159 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~--vGS~----~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y 159 (926)
.++..+.+++|.++ |-+ .+.+ +..++.+||.++|+++|. +++.+. . +...... +. .+
T Consensus 24 ~~~~i~~l~~lv~i-ps~~~s~~~~~~~~~~~~~~~l~~~l~~~G~------~~~~~~--~--~~~~~~~----g~--~~ 86 (485)
T 3dlj_A 24 QDEFVQTLKEWVAI-ESDSVQPVPRFRQELFRMMAVAADTLQRLGA------RVASVD--M--GPQQLPD----GQ--SL 86 (485)
T ss_dssp HHHHHHHHHHHHTS-CCBSSSCCHHHHHHHHHHHHHHHHHHHHTTC------EEEEEC--C--CEEEC------CC--EE
T ss_pred HHHHHHHHHHHhcC-CCccCCCCccccHHHHHHHHHHHHHHHHcCC------eEEEEe--c--CcccccC----CC--cc
Confidence 57788899999987 444 3332 245899999999999983 333321 1 0000000 00 00
Q ss_pred cccceEEEEEcCCCCCcCCCCEEEEeeecccccC---------------------CCCCCCchhHHHHHHHHHHHHHHcc
Q 002412 160 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWA 218 (926)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~ 218 (926)
....||++++.+. .+.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+
T Consensus 87 ~~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~ 162 (485)
T 3dlj_A 87 PIPPVILAELGSD----PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE 162 (485)
T ss_dssp ECCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEECCC----CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhC
Confidence 0136899999653 35678999999999985 3899999999999999999999887
Q ss_pred CCCCccEEEEEeCCcCCCCcchhHHhhcCCc--cCCceEEEEeccC
Q 002412 219 HGFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAIDLEAM 262 (926)
Q Consensus 219 ~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~--~~~v~a~iNLD~~ 262 (926)
.+++.+|.|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 163 ~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 163 QDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp CCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 7889999999999999999999999977642 3578888888853
No 30
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.26 E-value=3.4e-11 Score=137.51 Aligned_cols=158 Identities=14% Similarity=0.056 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcc-cccccccccccc-cccccc
Q 002412 86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGAN-RLVSGAFMGRTL-IYSDLN 163 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~-~~~gg~~~~~~~-~y~~~~ 163 (926)
.+++.+.+++|.++ |.+ |.++.++++||.++|+++|. +++.. ....... ...+ +..... ...+..
T Consensus 25 ~~~~~~~l~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~ 91 (433)
T 3pfo_A 25 FNDQVAFLQRMVQF-RSV--RGEEAPQQEWLAQQFADRGY------KVDTF--SLADVDIASHPK--AAPMDTIDPAGSM 91 (433)
T ss_dssp HHHHHHHHHHHHTS-CCB--TTCCHHHHHHHHHHHHHTTC------EEEEE--ETGGGTGGGSTT--CCCCTTCCGGGCE
T ss_pred HHHHHHHHHHHhcC-CCC--CCCHHHHHHHHHHHHHHCCC------ceEEE--ecchhhhhcccc--ccccccccCCCCc
Confidence 36788889999986 333 33445899999999999983 33322 1100000 0000 000000 122568
Q ss_pred eEEEEEcCCCCCcCCCCEEEEeeecccccCC---------------------CCCCCchhHHHHHHHHHHHHHHccCCCC
Q 002412 164 HIVLRIQPKYASEAAENAILVSSHIDTVFAA---------------------EGAGDCSSCVAVMLELARAMSQWAHGFK 222 (926)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~ 222 (926)
||+++++|. .+.+.|++.+|+|+||.. +|+.||++|++++|++++.|.+.+.+++
T Consensus 92 ~via~~~g~----~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~ 167 (433)
T 3pfo_A 92 QVVATADSD----GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPD 167 (433)
T ss_dssp EEEEEECCC----CCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEES
T ss_pred EEEEEEecC----CCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 999999874 356789999999999853 5999999999999999999998776788
Q ss_pred ccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCC
Q 002412 223 NAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 263 (926)
Q Consensus 223 ~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (926)
++|.|+|..+||.|..|++.++.+. .++.++|+.|..+
T Consensus 168 ~~v~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 168 ARVHVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp SCEEEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred ccEEEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 9999999999999889999988543 2467788887543
No 31
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.25 E-value=3.3e-11 Score=134.92 Aligned_cols=149 Identities=18% Similarity=0.257 Sum_probs=110.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002412 83 GFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 162 (926)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~ 162 (926)
.++.++.++.+++|.++ |.+ |.++.++++||.++|+++|. +++.+.... ....+.
T Consensus 2 ~~~~~~~~~~l~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G~------~v~~~~~~~----------------~~~~~~ 56 (373)
T 3gb0_A 2 MINQERLVNEFMELVQV-DSE--TKFEAEICKVLTKKFTDLGV------EVFEDDTMA----------------VTGHGA 56 (373)
T ss_dssp CSCHHHHHHHHHHHHTS-CCB--TTCCHHHHHHHHHHHHHTTC------EEEECSCHH----------------HHCCSS
T ss_pred CCCHHHHHHHHHHHhcc-cCC--CccHHHHHHHHHHHHHHCCC------EEEEecccc----------------ccCCCc
Confidence 36789999999999997 333 33456899999999999983 343321000 001135
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEeeecccccC--------------CCCC----CCchhHHHHHHHHHHHHHHccCCCCcc
Q 002412 163 NHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------AEGA----GDCSSCVAVMLELARAMSQWAHGFKNA 224 (926)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------spGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (926)
.||+++++|+ ..+.+.|++.+|+|+||. ++|+ .||+.|++++|++++.|.+.+. ++++
T Consensus 57 ~nv~a~~~g~---~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~ 132 (373)
T 3gb0_A 57 GNLICTLPAT---KDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGT 132 (373)
T ss_dssp CCEEEEECCS---STTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred eeEEEEecCC---CCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 7999999875 135678999999999974 3576 5999999999999999998754 6789
Q ss_pred EEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCC
Q 002412 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMG 263 (926)
Q Consensus 225 I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G 263 (926)
|.|+|..+||.|..|++.+..+. .+....+++|..+
T Consensus 133 v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 168 (373)
T 3gb0_A 133 IEFIITVGEESGLVGAKALDRER---ITAKYGYALDSDG 168 (373)
T ss_dssp EEEEEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECS
T ss_pred EEEEEEeccccCchhhhhhCHHh---cCCCEEEEEcCCC
Confidence 99999999999999999885322 2345666666543
No 32
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.23 E-value=4.1e-11 Score=139.14 Aligned_cols=128 Identities=16% Similarity=0.122 Sum_probs=104.7
Q ss_pred CCCHHHHHHHHHHH-HhcCCC--------------CCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccc
Q 002412 83 GFSEFEAIKHVKAL-TELGPH--------------PVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRL 147 (926)
Q Consensus 83 ~fs~erA~~~L~~L-~~igpr--------------~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~ 147 (926)
+.+.+++++.|++| ++|+.. +..|.++.++.+||.++++++|. +++.+
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~------~v~~d----------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGC------KVKVD----------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTC------EEEEB-----------
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCC------EEEEe-----------
Confidence 46778999999999 998421 22366777999999999999983 33322
Q ss_pred cccccccccccccccceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHccCCCCccEEE
Q 002412 148 VSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF 227 (926)
Q Consensus 148 ~gg~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~F 227 (926)
+..||+++++|+ .+.+.|++.+|+|+||.. |..|++.|++++|++++.|.+.+.+++++|.|
T Consensus 91 -------------~~gnvia~~~g~----~~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~l 152 (474)
T 2v8h_A 91 -------------KIGNMFAVYPGK----NGGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCV 152 (474)
T ss_dssp -------------TTCCEEEEECCS----SCCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -------------cCceEEEEECCC----CCCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 235899999875 233479999999999953 78899999999999999999988788999999
Q ss_pred EEeCCcCC-----CCcchhHHhh
Q 002412 228 LFNTGEEE-----GLNGAHSFVT 245 (926)
Q Consensus 228 lf~~~EE~-----gl~GS~~f~~ 245 (926)
+|+.+||. |+.||+.+..
T Consensus 153 if~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 153 VVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEECCccCCCCCCCcccHHHHHh
Confidence 99999998 7889999874
No 33
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.21 E-value=6.5e-11 Score=134.91 Aligned_cols=127 Identities=17% Similarity=0.099 Sum_probs=101.9
Q ss_pred CHHHHHHHHHHHHhcCCCC-------CCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccc
Q 002412 85 SEFEAIKHVKALTELGPHP-------VGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTL 157 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~-------vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~ 157 (926)
+.+++++.|++|++|.... ..+.++.++.+||.++++++|. +++.|
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~------~v~~~--------------------- 59 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGL------ETRFD--------------------- 59 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEC---------------------
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCC------EEEEe---------------------
Confidence 3578999999999984321 1235667899999999999983 33322
Q ss_pred cccccceEEEEEcCCCCCcCCCCEEEEeeecccccCCCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCC--
Q 002412 158 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEE-- 235 (926)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~-- 235 (926)
...|++++++|+ .+..+.|++.+|+|+||. .|..|++.|++++|++++.|.+.+.+++++|+|+|+.+||.
T Consensus 60 ---~~gnv~a~~~g~---~~~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~ 132 (423)
T 1z2l_A 60 ---EVGNLYGRLNGT---EYPQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSR 132 (423)
T ss_dssp ---TTSCEEEEECCS---SEEEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCS
T ss_pred ---cCCcEEEEEcCC---CCCCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccc
Confidence 224999999875 122478999999999995 48899999999999999999988778899999999999997
Q ss_pred ---CCcchhHHhh
Q 002412 236 ---GLNGAHSFVT 245 (926)
Q Consensus 236 ---gl~GS~~f~~ 245 (926)
|+.||+.+..
T Consensus 133 ~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 133 FPYVFWGSKNIFG 145 (423)
T ss_dssp SSCSCHHHHHHTT
T ss_pred cCCCcccHHHHHc
Confidence 5679998875
No 34
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.20 E-value=6.6e-11 Score=132.56 Aligned_cols=139 Identities=19% Similarity=0.192 Sum_probs=104.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHH-HHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccc
Q 002412 85 SEFEAIKHVKALTELGPHPVGSDA-LDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLN 163 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS~~-~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~ 163 (926)
+.+++.+.+++|.++ |.+...+. +.++.+||.++|+++|. +++.+ ..
T Consensus 4 ~~~~~~~~l~~l~~i-ps~s~~~~~e~~~~~~l~~~l~~~G~------~~~~~-------------------------~~ 51 (364)
T 2rb7_A 4 SMQHIVELTSDLIRF-PSMHSRPEQISRCAGFIMDWCAQNGI------HAERM-------------------------DH 51 (364)
T ss_dssp HHHHHHHHHHHHHTS-CCCTTCHHHHHHHHHHHHHHHHHTTC------CCEEE-------------------------EE
T ss_pred cHHHHHHHHHHHHcC-CCCCCCcchHHHHHHHHHHHHHHcCC------eEEEe-------------------------cC
Confidence 357889999999996 33332333 45899999999999983 23222 13
Q ss_pred eEEEEEcCCCCCcCCCCEEEEeeecccccC---------------CCCCCCchhHHHHHHHHHHHHHHccCCC---Ccc-
Q 002412 164 HIVLRIQPKYASEAAENAILVSSHIDTVFA---------------AEGAGDCSSCVAVMLELARAMSQWAHGF---KNA- 224 (926)
Q Consensus 164 NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------spGA~Dd~sgva~~LE~ar~L~~~~~~p---~~~- 224 (926)
|+++++.|+. ..+.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.++ +++
T Consensus 52 ~~~~~~~~~~--~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~ 129 (364)
T 2rb7_A 52 DGIPSVMVLP--EKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDM 129 (364)
T ss_dssp TTEEEEEECS--BTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CCceEEEEEc--CCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCc
Confidence 6677776531 124568999999999975 4789999999999999999999865455 457
Q ss_pred -EEEEEeCCcCC-CCcchhHHhhcCCccCCceEEEEecc
Q 002412 225 -VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEA 261 (926)
Q Consensus 225 -I~Flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNLD~ 261 (926)
|.|+|+.+||. |+.|++.++++. +..+.+++|.
T Consensus 130 ~v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 130 ALGLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp CEEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred cEEEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 99999999996 689999998654 4567777663
No 35
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.20 E-value=7.7e-11 Score=131.79 Aligned_cols=139 Identities=22% Similarity=0.211 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002412 87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 166 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi 166 (926)
+++.+.+++|.++ |.+. .++.++.+||.++|+++|.+ . ++++. ...|++
T Consensus 13 ~~~~~~~~~l~~~-ps~s--~~e~~~~~~l~~~l~~~G~~---~--~~~~~-----------------------~~~~~~ 61 (369)
T 3tx8_A 13 GDPIVLTQRLVDI-PSPS--GQEKQIADEIEDALRNLNLP---G--VEVFR-----------------------FNNNVL 61 (369)
T ss_dssp SCHHHHHHHHHSS-CCBT--TCTHHHHHHHHHHHHTTTCT---T--CEEEE-----------------------ETTEEE
T ss_pred HHHHHHHHHHhcC-CCCC--ccHHHHHHHHHHHHHhcCCC---C--cEEec-----------------------cCCcEE
Confidence 4578899999986 3333 33468899999999998731 1 22221 125899
Q ss_pred EEEcCCCCCcCCCCEEEEeeecccccC--------------CCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCC
Q 002412 167 LRIQPKYASEAAENAILVSSHIDTVFA--------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTG 232 (926)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~ 232 (926)
++++++ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++. .+++++|.|+|..+
T Consensus 62 a~~~~~-----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~ 135 (369)
T 3tx8_A 62 ARTNRG-----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYEC 135 (369)
T ss_dssp EECCCC-----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECC
T ss_pred EEecCC-----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEec
Confidence 998763 3578999999999986 389999999999999999999863 46789999999999
Q ss_pred cCCCC--cchhHHhhcCCccCCceEEEEeccC
Q 002412 233 EEEGL--NGAHSFVTQHPWSTTIRVAIDLEAM 262 (926)
Q Consensus 233 EE~gl--~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (926)
||.|. .|++.++++++...+...+++.|..
T Consensus 136 EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 136 EEVADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp CSSCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred cccCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 99987 7999999776432345677777643
No 36
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.18 E-value=3.7e-10 Score=125.54 Aligned_cols=224 Identities=15% Similarity=0.173 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEE
Q 002412 88 EAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVL 167 (926)
Q Consensus 88 rA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~ 167 (926)
+..+.|++|+++ |.+.|.+ +.+++|+.+++++++. ++++| +..|+++
T Consensus 6 ~~~~~l~~Lv~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia 52 (346)
T 1vho_A 6 ETGKLLMELSNL-DGPSGYE--TNVVSYIKSVIEPFVD------EAKTT------------------------RHGSLIG 52 (346)
T ss_dssp CHHHHHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGCS------EEEEC------------------------TTSCEEE
T ss_pred HHHHHHHHHHcC-CCCCcch--HHHHHHHHHHHHhhCC------EEEEe------------------------cCCcEEE
Confidence 356789999997 5555543 4689999999999873 33332 3369999
Q ss_pred EEcCCCCCcCCCCEEEEeeecccccC---------------------------------C--------------------
Q 002412 168 RIQPKYASEAAENAILVSSHIDTVFA---------------------------------A-------------------- 194 (926)
Q Consensus 168 ~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------------------s-------------------- 194 (926)
+++|+ ..+.++++||+|+|+. .
T Consensus 53 ~~~g~-----~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~ 127 (346)
T 1vho_A 53 YKKGK-----GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESR 127 (346)
T ss_dssp EECCS-----SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHH
T ss_pred EEcCC-----CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhc
Confidence 98764 2368999999999941 0
Q ss_pred ---------------------CC-------------------CCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcC
Q 002412 195 ---------------------EG-------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEE 234 (926)
Q Consensus 195 ---------------------pG-------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE 234 (926)
.| +.||..|+++++++++.+.+.+ ++.++.++|+.+||
T Consensus 128 ~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EE 205 (346)
T 1vho_A 128 KKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEE 205 (346)
T ss_dssp HTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTS
T ss_pred ccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcc
Confidence 11 4799999999999999997643 56799999999999
Q ss_pred CCCcchhHHhhcCCccCCceEEEEeccCCCCCCcc----------eee--cCCChhHHHHHHHHccCCCCcchhhhhccc
Q 002412 235 EGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKSG----------LFQ--AGPHPWAVENFAAAAKYPSGQVTAQDLFAS 302 (926)
Q Consensus 235 ~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gG~~~----------lfq--~g~~~~li~~~~~~a~~p~~~~l~~~~f~~ 302 (926)
.|+.|++.... .. .....|.+|....+.... .+. ...++.+++...++++. .+.. ++.
T Consensus 206 vG~~Ga~~~~~--~i--~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~-~gi~-----~~~ 275 (346)
T 1vho_A 206 TGCLGALTGAY--EI--NPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKK-HNVS-----LQE 275 (346)
T ss_dssp SSHHHHHHTTC--CC--CCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHH-TTCC-----CEE
T ss_pred cchhhHHHHhc--cc--CCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHH-CCCC-----EEE
Confidence 99999886542 22 224667777765432100 111 11356666666554322 1211 111
Q ss_pred CCC-C-CCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHcC
Q 002412 303 GAI-T-SATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS 366 (926)
Q Consensus 303 g~i-p-s~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~~ 366 (926)
... . .+||...+.. ..|+|.+++.-- .. ..|++ .+.++.+.+....+.+.+++..+...
T Consensus 276 ~~~~g~ggsDa~~~~~~~~gipt~~lg~~-~~-~~Hs~---~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 276 EAVGGRSGTETDFVQLVRNGVRTSLISIP-LK-YMHTP---VEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp ESSCCC----CTTHHHHHTTCEEEEEEEE-CB-STTST---TEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred EeCCCCCCchHHHHHHhCCCCcEEEEehh-hc-ccccH---HHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 112 2 6789888852 379999986543 33 38987 45677899999999999999887653
No 37
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.16 E-value=4.7e-10 Score=129.53 Aligned_cols=127 Identities=15% Similarity=0.135 Sum_probs=100.9
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCH----------HHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccc
Q 002412 85 SEFEAIKHVKALTELGPHPVGSD----------ALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMG 154 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS~----------~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~ 154 (926)
..+++++.+++|.++ |.+.+.+ +..++.+||.++++++|. +++. .
T Consensus 12 ~~~~~~~~l~~l~~i-ps~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~------~~~~----~-------------- 66 (470)
T 1lfw_A 12 KKDAILKDLEELIAI-DSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGF------DTEN----F-------------- 66 (470)
T ss_dssp THHHHHHHHHHHHTS-CCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTC------EEEE----E--------------
T ss_pred hHHHHHHHHHHHcCC-CCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCC------eEEE----e--------------
Confidence 357889999999997 4444332 346899999999999983 3322 1
Q ss_pred ccccccccceEEEEEcCCCCCcCCCCEEEEeeecccccC--------------------CCCCCCchhHHHHHHHHHHHH
Q 002412 155 RTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------------AEGAGDCSSCVAVMLELARAM 214 (926)
Q Consensus 155 ~~~~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~--------------------spGA~Dd~sgva~~LE~ar~L 214 (926)
+..++++++ |+ ..+.|++.+|+|+||. ++|+.||+.|++++|++++.|
T Consensus 67 ------~~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l 134 (470)
T 1lfw_A 67 ------ANYAGRVNF-GA-----GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLL 134 (470)
T ss_dssp ------TTTEEEEEE-CC-----CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHH
T ss_pred ------cCeEEEEEe-CC-----CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHH
Confidence 113567776 53 2478999999999973 367899999999999999999
Q ss_pred HHccCCCCccEEEEEeCCcCCCCcchhHHhhcCC
Q 002412 215 SQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (926)
Q Consensus 215 ~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~ 248 (926)
++.+.+++++|.|+|+.+||.|..|++.+++++.
T Consensus 135 ~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 135 KEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp HHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred HHcCCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 9887788999999999999999999999997654
No 38
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.15 E-value=4e-10 Score=125.16 Aligned_cols=218 Identities=18% Similarity=0.229 Sum_probs=147.4
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEEc
Q 002412 91 KHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQ 170 (926)
Q Consensus 91 ~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~~i~ 170 (926)
+.|++|+++ |.+.|.+ +++++|+.+++++++. ++++| +..|++++++
T Consensus 7 ~~l~~Lv~~-~s~sg~e--~~~~~~l~~~l~~~g~------~v~~d------------------------~~gnlia~~~ 53 (348)
T 1ylo_A 7 SLLKALSEA-DAIASSE--QEVRQILLEEAARLQK------EVRFD------------------------GLGSVLIRLN 53 (348)
T ss_dssp HHHHHHHHS-CCBTTBC--HHHHHHHHHHHHHTTC------CEEEC------------------------TTCCEEEECC
T ss_pred HHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------cCCCEEEEec
Confidence 679999996 5555543 3689999999999873 33332 3358999987
Q ss_pred CCCCCcCCCCEEEEeeecccccC---------------------------------------------------------
Q 002412 171 PKYASEAAENAILVSSHIDTVFA--------------------------------------------------------- 193 (926)
Q Consensus 171 g~~~~~~~~~~VLl~AH~DSv~~--------------------------------------------------------- 193 (926)
|+ ..+.|+++||+|+|+.
T Consensus 54 g~-----~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~i 128 (348)
T 1ylo_A 54 ES-----TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRV 128 (348)
T ss_dssp CC-----SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEE
T ss_pred CC-----CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEE
Confidence 63 2467999999999950
Q ss_pred ---------------CCC--------------------CCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCc
Q 002412 194 ---------------AEG--------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLN 238 (926)
Q Consensus 194 ---------------spG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~ 238 (926)
..| +.||+.|+++++++++.+.+. .++.++.++|+.+||.|+.
T Consensus 129 d~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~~ 206 (348)
T 1ylo_A 129 DIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLR 206 (348)
T ss_dssp ECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCCTTSSH
T ss_pred EecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEEcccccchh
Confidence 012 489999999999999998764 3668999999999999999
Q ss_pred chhHHhhcCCccCCceEEEEeccCCCCCC---------------cceee-cC--CChhHHHHHHHHc---cCCCCcchhh
Q 002412 239 GAHSFVTQHPWSTTIRVAIDLEAMGIGGK---------------SGLFQ-AG--PHPWAVENFAAAA---KYPSGQVTAQ 297 (926)
Q Consensus 239 GS~~f~~~h~~~~~v~a~iNLD~~G~gG~---------------~~lfq-~g--~~~~li~~~~~~a---~~p~~~~l~~ 297 (926)
|++...... .....+++|+...+.. .+... .. .++.+++...+++ ..|...
T Consensus 207 Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~~---- 278 (348)
T 1ylo_A 207 GGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQA---- 278 (348)
T ss_dssp HHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCEE----
T ss_pred HHHHhhccc----CCCEEEEEeccccCCCCCCCccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE----
Confidence 988755321 2246788887654321 11111 11 1456665554443 222211
Q ss_pred hhcccCCCCCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHc
Q 002412 298 DLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 365 (926)
Q Consensus 298 ~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~ 365 (926)
+. ..+.+||...+.. ..|+|.+++. .... ..||+ .+.++.+.+....+.+.+++..+++
T Consensus 279 ~~----~~~ggsDa~~~~~~~~gipt~~lg-~~~~-~~Hs~---~E~~~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 279 DM----FSNGGTDGGAVHLTGTGVPTLVMG-PATR-HGHCA---ASIADCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp EE----CSSCCCHHHHHHTSTTCCCEEEEE-CCCB-SCSSS---CEEEEHHHHHHHHHHHHHHHHTCCH
T ss_pred ee----cCCCcchHHHHHHhcCCCCEEEEC-cccC-cCCCc---ceEeeHHHHHHHHHHHHHHHHHhhH
Confidence 01 1246899999853 2599999654 3333 48997 4566788899999988888887653
No 39
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.13 E-value=1.9e-10 Score=130.06 Aligned_cols=152 Identities=18% Similarity=0.235 Sum_probs=109.3
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccccc
Q 002412 81 KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS 160 (926)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~ 160 (926)
.-+.+.++.++.+++|.++ |.+ |.++.++++||.++|+++|. +++.+.... ....
T Consensus 18 ~~~~~~~~~~~~l~~L~~i-ps~--s~~E~~~~~~l~~~l~~~G~------~v~~~~~~~----------------~~~~ 72 (396)
T 3rza_A 18 QGMINEQRLLNTFLELVQI-DSE--TGNESTIQPILKEKFIALGL------DVKEDEAAK----------------HPKL 72 (396)
T ss_dssp -CCSCHHHHHHHHHHHHTS-CCB--TTCTTTHHHHHHHHHHHTTC------EEEECSGGG----------------STTC
T ss_pred EEeecHHHHHHHHHHHeec-CCC--CcCHHHHHHHHHHHHHHCCC------EEEEecccc----------------ccCC
Confidence 3467899999999999997 333 33446899999999999983 343321000 0001
Q ss_pred ccceEEEEEcCCCCCcCCCCEEEEeeecccccC---------------CCCC----CCchhHHHHHHHHHHHHHHccCCC
Q 002412 161 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------AEGA----GDCSSCVAVMLELARAMSQWAHGF 221 (926)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------spGA----~Dd~sgva~~LE~ar~L~~~~~~p 221 (926)
+..||+++++|+. ++.+.+.|++.+|+|+||. ++|+ .||++|++++|++++.|.+.+. +
T Consensus 73 ~~~nvia~~~g~~-~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~ 150 (396)
T 3rza_A 73 GANNLVCTMNSTI-EEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-P 150 (396)
T ss_dssp SSCCEEEEECCCC-C---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-C
T ss_pred CCceEEEEECCcC-CCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-C
Confidence 3579999998741 0134678999999999963 4666 4999999999999999988753 6
Q ss_pred CccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccC
Q 002412 222 KNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 262 (926)
Q Consensus 222 ~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (926)
+.+|.|+|..+||.|..|++.+..+. -+....+++|..
T Consensus 151 ~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~ 188 (396)
T 3rza_A 151 HGQIQFVITVGEESGLIGAKELNSEL---LDADFGYAIDAS 188 (396)
T ss_dssp CCCEEEEEESCGGGTSHHHHHCCGGG---CCCSEEEEEEES
T ss_pred CCCEEEEEEcccccccHhHhhhchhh---cccceEEEEecC
Confidence 78999999999999999999886432 123455666643
No 40
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.12 E-value=1.9e-10 Score=129.90 Aligned_cols=142 Identities=19% Similarity=0.215 Sum_probs=105.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccce
Q 002412 85 SEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH 164 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~N 164 (926)
+.++..+.+++|.++ |.+ |.++.++.+||.++|+++|. +++.. .. .+..|
T Consensus 4 ~~~~~~~~l~~lv~~-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~--~~-------------------~~~~n 53 (393)
T 1vgy_A 4 TETQSLELAKELISR-PSV--TPDDRDCQKLMAERLHKIGF------AAEEM--HF-------------------GNTKN 53 (393)
T ss_dssp CCSHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHTTTC------EEEEC--CB-------------------TTBCE
T ss_pred chHHHHHHHHHHhcC-CCC--CCCcHHHHHHHHHHHHHcCC------cEEEE--ec-------------------CCCcE
Confidence 346788999999986 333 33334688999999999873 33321 00 13579
Q ss_pred EEEEEcCCCCCcCCCCEEEEeeecccccC---------------------CCCCCCchhHHHHHHHHHHHHHHccCCCCc
Q 002412 165 IVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKN 223 (926)
Q Consensus 165 Vi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (926)
|++++ |+ ..+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.++++
T Consensus 54 v~a~~-g~-----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~ 127 (393)
T 1vgy_A 54 IWLRR-GT-----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQG 127 (393)
T ss_dssp EEEEE-CS-----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred EEEEE-CC-----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCC
Confidence 99998 53 2578999999999985 368889999999999999999987777899
Q ss_pred cEEEEEeCCcCC-CCcchhHHhhcCCc-cCCceEEEEeccC
Q 002412 224 AVIFLFNTGEEE-GLNGAHSFVTQHPW-STTIRVAIDLEAM 262 (926)
Q Consensus 224 ~I~Flf~~~EE~-gl~GS~~f~~~h~~-~~~v~a~iNLD~~ 262 (926)
+|+|+|+.+||. |+.|++.+++.... ..++.+++..|..
T Consensus 128 ~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 128 SIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred cEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 999999999997 47899988743211 1235566665543
No 41
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.12 E-value=1.2e-10 Score=132.52 Aligned_cols=138 Identities=15% Similarity=0.167 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHhcCCCCCC--------CHHHHHHHHHHHHHHHHhccccCCcee-EEEEEEeccCCcccccccccccccc
Q 002412 87 FEAIKHVKALTELGPHPVG--------SDALDRALQYVFAAAQKIKETKHWEVD-VEVDFFHAKSGANRLVSGAFMGRTL 157 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vG--------S~~~~~a~~yL~~~l~~ig~~~~~~~~-ve~d~~~~~~g~~~~~gg~~~~~~~ 157 (926)
+++++.|++|+++. .+.+ ++++.++++||.++|+++|. + ++.+
T Consensus 2 ~~~~~~l~~Lv~i~-s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~------~~~~~~--------------------- 53 (417)
T 1fno_A 2 DKLLERFLHYVSLD-TQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGL------VNITLS--------------------- 53 (417)
T ss_dssp CSHHHHHHHHHTSC-CBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTC------EEEEEC---------------------
T ss_pred hHHHHHHHHhEEec-CCCCcccCCCCCCccHHHHHHHHHHHHHHcCC------CeEEEC---------------------
Confidence 35778899999973 3333 23567899999999999983 2 3221
Q ss_pred cccccceEEEEEcCCCCCcCCCCEEEEeeecccccCC-------------------------------------------
Q 002412 158 IYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------------------------- 194 (926)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s------------------------------------------- 194 (926)
+..||+++++|+. ..+.+.|++.+|+|+||..
T Consensus 54 ---~~~nvia~~~g~~--~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~ 128 (417)
T 1fno_A 54 ---EKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTL 128 (417)
T ss_dssp ---TTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCE
T ss_pred ---CCceEEEEECCCC--CCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcE
Confidence 2369999998751 1135689999999999742
Q ss_pred ---CCC----CCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccC
Q 002412 195 ---EGA----GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 262 (926)
Q Consensus 195 ---pGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (926)
+|+ .||+.|+|++|++++.|++.+ .++++|+|+|+.+||.| .|++.+..+. . +....+++|..
T Consensus 129 l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 129 ITTDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred EEcCCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 133 889999999999999999877 67899999999999998 8998776321 1 35567777753
No 42
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.11 E-value=2.7e-10 Score=132.91 Aligned_cols=140 Identities=17% Similarity=0.238 Sum_probs=107.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccc
Q 002412 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD 161 (926)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~ 161 (926)
.+++.++.++.+++|.++ |++.+. +.++.+||.++++++|. +++.| .
T Consensus 9 ~~~~~~~~~~~~~~L~~i-ps~s~~--e~~~~~~l~~~l~~~G~------~v~~~------------------------~ 55 (490)
T 3mru_A 9 STLSPAPLWQFFDKICSI-PHPSKH--EEALAQYIVTWATEQGF------DVRRD------------------------P 55 (490)
T ss_dssp GGSSSHHHHHHHHHHHHS-CCBTTC--CTTHHHHHHHHHHHTTC------EEEEC------------------------T
T ss_pred hccCHHHHHHHHHHHhCC-CCCCCC--HHHHHHHHHHHHHHcCC------EEEEc------------------------C
Confidence 357889999999999997 665543 46899999999999983 33321 2
Q ss_pred cceEEEEEcCCCCCcCCCCEEEEeeecccccCC------------------------CCCC---CchhHHHHHHHHHHHH
Q 002412 162 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------EGAG---DCSSCVAVMLELARAM 214 (926)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s------------------------pGA~---Dd~sgva~~LE~ar~L 214 (926)
..||+++++|+. +..+.+.|++.+|+|+||.. +|+. ||+.|+|++|++++
T Consensus 56 ~~nv~a~~~g~~-g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~-- 132 (490)
T 3mru_A 56 TGNVFIKKPATP-GMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA-- 132 (490)
T ss_dssp TCCEEEEECCCT-TCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH--
T ss_pred CCeEEEEEcCCC-CCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH--
Confidence 359999998741 11356789999999999753 5776 99999999999763
Q ss_pred HHccCCCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccC
Q 002412 215 SQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 262 (926)
Q Consensus 215 ~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (926)
....++.+|.|+|+.+||.|+.|++.++++. -+.+..+|+|..
T Consensus 133 --~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 --SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp --CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred --hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2345678999999999999999999988432 245788888853
No 43
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.10 E-value=5.8e-10 Score=130.10 Aligned_cols=127 Identities=19% Similarity=0.239 Sum_probs=100.1
Q ss_pred CHHHHHHHHHHHHhcCCCCCCC----------HHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccc
Q 002412 85 SEFEAIKHVKALTELGPHPVGS----------DALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMG 154 (926)
Q Consensus 85 s~erA~~~L~~L~~igpr~vGS----------~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~ 154 (926)
..++..+.+++|.++ |-+.+. ++..++.+|+.++|+++|. +++..
T Consensus 32 ~~~~~~~~l~~lv~i-ps~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~------~~~~~------------------ 86 (492)
T 3khx_A 32 YEDQIINDLKGLLAI-ESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGF------TTHDV------------------ 86 (492)
T ss_dssp THHHHHHHHHHHHTS-CCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTC------EEEEE------------------
T ss_pred hHHHHHHHHHHHhcC-CCCCCCcccccccccchHHHHHHHHHHHHHHHcCC------cceEe------------------
Confidence 357889999999997 333332 2346899999999999983 22210
Q ss_pred ccccccccceEEEEEc-CCCCCcCCCCEEEEeeecccccC-------------------CCCCCCchhHHHHHHHHHHHH
Q 002412 155 RTLIYSDLNHIVLRIQ-PKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAM 214 (926)
Q Consensus 155 ~~~~y~~~~NVi~~i~-g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sgva~~LE~ar~L 214 (926)
.|++++++ |+ .++.|++.+|+|+||. ++|+.||++|++++|++++.|
T Consensus 87 --------~~~~~~~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l 153 (492)
T 3khx_A 87 --------DHIAGRIEAGK-----GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKIL 153 (492)
T ss_dssp --------TTTEEEEEEEC-----SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHH
T ss_pred --------CCEEEEEEeCC-----CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHH
Confidence 23444443 32 3578999999999985 269999999999999999999
Q ss_pred HHccCCCCccEEEEEeCCcCCCCcchhHHhhcCCc
Q 002412 215 SQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPW 249 (926)
Q Consensus 215 ~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~ 249 (926)
++.+.+++++|.|+|..+||.|..|++.++++++.
T Consensus 154 ~~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~ 188 (492)
T 3khx_A 154 EDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM 188 (492)
T ss_dssp HHTTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC
T ss_pred HHcCCCCCCCEEEEEECCccCCCcCHHHHHHhCcC
Confidence 98877889999999999999999999999987753
No 44
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.08 E-value=4.9e-10 Score=129.95 Aligned_cols=145 Identities=14% Similarity=0.187 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHhcCCCCCCC--------HHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccc
Q 002412 87 FEAIKHVKALTELGPHPVGS--------DALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLI 158 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS--------~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~ 158 (926)
+++.+.+++|.++ |-..+. .+..++.+|+.++|+++|.+ ..++++. .. .+
T Consensus 18 ~~~~~~l~~lv~i-ps~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~---~~~~~~~--~~-------~~--------- 75 (472)
T 3pfe_A 18 EEILPSLCDYIKI-PNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPK---GMTLEIV--RL-------KN--------- 75 (472)
T ss_dssp HTHHHHHHHHHTC-CCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCT---TCEEEEE--CC-------TT---------
T ss_pred HHHHHHHHHHhCC-CCcCCCccccccccchHHHHHHHHHHHHHHcCCC---CcceEEE--ec-------CC---------
Confidence 4578889999986 222211 12458999999999999842 1123221 11 00
Q ss_pred ccccceEEEEEcCCCCCcCCCCEEEEeeecccccC---------------------CCCCCCchhHHHHHHHHHHHHHHc
Q 002412 159 YSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQW 217 (926)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~ 217 (926)
+..||+++++|+ +.+.|++.+|+|+||. ++|+.||+.+++++|++++.|.+.
T Consensus 76 --~~~~v~a~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~ 148 (472)
T 3pfe_A 76 --RTPLLFMEIPGQ-----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQ 148 (472)
T ss_dssp --SCCEEEEEECCS-----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHT
T ss_pred --CCcEEEEEEcCC-----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHc
Confidence 247999999773 3578999999998873 379999999999999999999987
Q ss_pred cCCCCccEEEEEeCCcCCCCcchhHHhhcCCc-cCCceEEEEecc
Q 002412 218 AHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAIDLEA 261 (926)
Q Consensus 218 ~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~iNLD~ 261 (926)
+.++. +|.|+|..+||.|..|++.++++++. .+++.+++.+|.
T Consensus 149 ~~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~ 192 (472)
T 3pfe_A 149 GLPYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDS 192 (472)
T ss_dssp TCCCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECC
T ss_pred CCCCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCC
Confidence 76666 99999999999999999999976531 236788888884
No 45
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.08 E-value=1.3e-09 Score=122.11 Aligned_cols=225 Identities=22% Similarity=0.199 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002412 87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 166 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi 166 (926)
.+.++.|++|+++ |.+.|.+ +++++|+.+++++++. +++.| +..|++
T Consensus 3 ~~~~~~l~~L~~i-ps~SG~E--~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNli 49 (355)
T 3kl9_A 3 TTLFSKIKEVTEL-AAVSGHE--APVRAYLREKLTPHVD------EVVTD------------------------GLGGIF 49 (355)
T ss_dssp HHHHHHHHHHHTS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEE
T ss_pred HHHHHHHHHHHhC-CCCCCCH--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCeEE
Confidence 3578899999996 6777755 4789999999999873 34433 346999
Q ss_pred EEEcCCCCCcCCCCEEEEeeecccccC--------C--------------------------------------------
Q 002412 167 LRIQPKYASEAAENAILVSSHIDTVFA--------A-------------------------------------------- 194 (926)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~--------s-------------------------------------------- 194 (926)
++++|+. ++.+.|++.||+|+|+. +
T Consensus 50 ~~~~g~~---~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~ 126 (355)
T 3kl9_A 50 GIKHSEA---VDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRG 126 (355)
T ss_dssp EEECCCS---TTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------
T ss_pred EEECCcC---CCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccCh
Confidence 9998751 24578999999999963 0
Q ss_pred ---------------------------------------------------CCCCCchhHHHHHHHHHHHHHHccCCCCc
Q 002412 195 ---------------------------------------------------EGAGDCSSCVAVMLELARAMSQWAHGFKN 223 (926)
Q Consensus 195 ---------------------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (926)
..+.||..||++++|+++.+++. .+++
T Consensus 127 ~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~ 204 (355)
T 3kl9_A 127 KGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGN 204 (355)
T ss_dssp ------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSS
T ss_pred hhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCc
Confidence 25789999999999999998753 5789
Q ss_pred cEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCCCC-----------CCcceeec-C--CChhHHHHHHHHccC
Q 002412 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIG-----------GKSGLFQA-G--PHPWAVENFAAAAKY 289 (926)
Q Consensus 224 ~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~g-----------G~~~lfq~-g--~~~~li~~~~~~a~~ 289 (926)
+++++|+..||.|+.||+....... ...+|++|+.-++ |+.+-... + .++.+.+.+.+.++.
T Consensus 205 ~v~~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~ 280 (355)
T 3kl9_A 205 ELYLGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEE 280 (355)
T ss_dssp EEEEEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHHH
T ss_pred eEEEEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999987663321 2347888875332 22222221 1 256777766654421
Q ss_pred CCCcchhhhhcccCCCCCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHH
Q 002412 290 PSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAA 364 (926)
Q Consensus 290 p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La 364 (926)
.+.. .|..+. ..+||...+.. ..|+|..++.. ... ..||+. +.++.+.+.+..+.+.++++.+.
T Consensus 281 -~gIp-~q~~~~----ggGtDa~~i~~a~~Gipt~~igv-p~~-~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 281 -AGIK-YQYYCG----KGGTDAGAAHLKNGGVPSTTIGV-CAR-YIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp -TTCC-EEEEEC----SSCCTHHHHTTSTTCCCEEEEEE-EEB-SCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred -cCCC-EEEECC----CcchHHHHHHHhCCCCCEEEEcc-CcC-CCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 1111 111111 25899988764 26899998653 222 388876 56778888888888888887764
No 46
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.06 E-value=6.5e-10 Score=123.97 Aligned_cols=139 Identities=19% Similarity=0.194 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002412 87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 166 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi 166 (926)
++..+.+++|.++ |-+ |..+.++++||.++|+++|. +++.. . ..+..|++
T Consensus 3 ~~~~~~~~~L~~~-ps~--s~~e~~~~~~l~~~l~~~g~------~~~~~--~-------------------~~~~~n~~ 52 (377)
T 3isz_A 3 EKVVSLAQDLIRR-PSI--SPNDEGCQQIIAERLEKLGF------QIEWM--P-------------------FNDTLNLW 52 (377)
T ss_dssp HHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHHTTC------EEEEC--C-------------------BTTBCEEE
T ss_pred hHHHHHHHHHhcC-CCC--CCChhhHHHHHHHHHHHCCC------ceEEe--e-------------------cCCCceEE
Confidence 5778899999986 333 33345789999999999983 33221 0 01457999
Q ss_pred EEEcCCCCCcCCCCEEEEeeecccccC---------------------CCCCCCchhHHHHHHHHHHHHHHccCCCCccE
Q 002412 167 LRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAV 225 (926)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~---------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (926)
+++ |+ +.+.|++.+|+|+||. ++|+.|++.|++++|++++.+.+.+.+++++|
T Consensus 53 a~~-g~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v 126 (377)
T 3isz_A 53 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 126 (377)
T ss_dssp EEE-ES-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceE
Confidence 988 53 3578999999999985 26788999999999999999988777788999
Q ss_pred EEEEeCCcCCCC-cchhHHhhcCCc-cCCceEEEEecc
Q 002412 226 IFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAIDLEA 261 (926)
Q Consensus 226 ~Flf~~~EE~gl-~GS~~f~~~h~~-~~~v~a~iNLD~ 261 (926)
.|+|..+||.|. .|++.+++.... ..++.+++..|.
T Consensus 127 ~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~ 164 (377)
T 3isz_A 127 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEP 164 (377)
T ss_dssp EEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCC
T ss_pred EEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCC
Confidence 999999999876 699988743211 123556665553
No 47
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.02 E-value=3e-09 Score=121.35 Aligned_cols=135 Identities=15% Similarity=0.215 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEE
Q 002412 87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV 166 (926)
Q Consensus 87 erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi 166 (926)
++..+.+++|.++ |.+.+ ++.++.+||.++|+++|. +++.+. ...|++
T Consensus 28 ~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~v~~~~-----------------------~~~~l~ 75 (418)
T 1xmb_A 28 DWMVKIRRKIHEN-PELGY--EELETSKLIRSELELIGI------KYRYPV-----------------------AITGVI 75 (418)
T ss_dssp HHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHHTC------CEEEEE-----------------------TTTEEE
T ss_pred HHHHHHHHHHHhC-CCCCC--ChHHHHHHHHHHHHHcCC------eeEecc-----------------------CCcEEE
Confidence 6788999999996 44433 345889999999999983 333321 236999
Q ss_pred EEEcCCCCCcCCCCEEEEeeecccccCCC-----------CC---CCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCC
Q 002412 167 LRIQPKYASEAAENAILVSSHIDTVFAAE-----------GA---GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTG 232 (926)
Q Consensus 167 ~~i~g~~~~~~~~~~VLl~AH~DSv~~sp-----------GA---~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~ 232 (926)
++++|. .+ +.|++.+|+|+||... |. .+...|++++|++++.|.+.+.+++++|+|+|+.+
T Consensus 76 a~~~~~----~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~ 150 (418)
T 1xmb_A 76 GYIGTG----EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPA 150 (418)
T ss_dssp EEEESS----SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECC
T ss_pred EEEcCC----CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecc
Confidence 999764 23 7899999999998531 21 11237999999999999987767889999999999
Q ss_pred cCCCCcchhHHhhcCCccCCceEEEEec
Q 002412 233 EEEGLNGAHSFVTQHPWSTTIRVAIDLE 260 (926)
Q Consensus 233 EE~gl~GS~~f~~~h~~~~~v~a~iNLD 260 (926)
|| |..|++.++++... +++.++++++
T Consensus 151 EE-g~~G~~~~~~~g~~-~~~d~~i~~~ 176 (418)
T 1xmb_A 151 EE-GLSGAKKMREEGAL-KNVEAIFGIH 176 (418)
T ss_dssp TT-TTCHHHHHHHTTTT-TTEEEEEEEE
T ss_pred cc-ccccHHHHHHcCCc-CCCCEEEEEe
Confidence 99 99999999965432 3466777753
No 48
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.00 E-value=1.1e-09 Score=122.59 Aligned_cols=130 Identities=19% Similarity=0.208 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002412 86 EFEAIKHVKALTELGPHPVGSD---ALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 162 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~vGS~---~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~ 162 (926)
.+++.+.+++|.++ |...... ++.++.+||.++|+ | ++++.+. .. .+.
T Consensus 8 ~~~~~~~l~~l~~i-ps~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~--~~------------------~~~ 58 (369)
T 2f7v_A 8 LASTLEHLETLVSF-DTRNPPRAIAAEGGIFDYLRAQLP--G------FQVEVID--HG------------------DGA 58 (369)
T ss_dssp HHHHHHHHHHHHHS-CCBTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEE--CS------------------TTC
T ss_pred hHHHHHHHHHHhCC-CCcCCCCCCccHHHHHHHHHHHhC--C------CceEEEE--cC------------------CCc
Confidence 57889999999997 3332112 44589999999988 5 2344331 10 034
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEeeecccccC-------------------CCCCCCchhHHHHHHHHHHHHHHccCCCCc
Q 002412 163 NHIVLRIQPKYASEAAENAILVSSHIDTVFA-------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKN 223 (926)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~-------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (926)
.|+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. +++
T Consensus 59 ~~~~a-~~g~-------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~ 123 (369)
T 2f7v_A 59 VSLYA-VRGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDG 123 (369)
T ss_dssp EEEEE-EESC-------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCC
T ss_pred eEEEE-EcCC-------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCC
Confidence 79999 8752 56999999999974 37899999999999999986 678
Q ss_pred cEEEEEeCCcCC-CCcchhHHhhcCCccCCceEEEEeccC
Q 002412 224 AVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAIDLEAM 262 (926)
Q Consensus 224 ~I~Flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (926)
+|+|+|+.+||. |+.|++.++++.. +..+++++|..
T Consensus 124 ~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 124 DAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999 8999999996543 56678888764
No 49
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=98.99 E-value=1.7e-09 Score=125.71 Aligned_cols=139 Identities=17% Similarity=0.236 Sum_probs=104.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCccccccccccccccccccc
Q 002412 83 GFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDL 162 (926)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~ 162 (926)
+++.+++++.+++|.++ |.+.+ ++.++.+||.++++++|. +++.+ ..
T Consensus 7 ~~~~~~~~~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~~~~~------------------------~~ 53 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAI-PHPSY--KEEQLAQFIINWAKTKGF------FAERD------------------------EV 53 (487)
T ss_dssp CSSSHHHHHHHHHHHHS-CCBTT--CCHHHHHHHHHHHHHTTC------EEEEC------------------------TT
T ss_pred ccCHHHHHHHHHHHHcC-CCCCC--cHHHHHHHHHHHHHHcCC------EEEEc------------------------CC
Confidence 46778999999999997 44433 345899999999999983 33322 23
Q ss_pred ceEEEEEcCCCCCcCCCCEEEEeeecccccCC------------------------CCCC---CchhHHHHHHHHHHHHH
Q 002412 163 NHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------------EGAG---DCSSCVAVMLELARAMS 215 (926)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s------------------------pGA~---Dd~sgva~~LE~ar~L~ 215 (926)
.|++++++|+. +..+.+.|++.+|+|+||.. +|+. ||+.|++++|++++.
T Consensus 54 ~nv~a~~~g~~-g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~-- 130 (487)
T 2qyv_A 54 GNVLIRKPATV-GMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES-- 130 (487)
T ss_dssp CCEEEEECCCT-TCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC--
T ss_pred CcEEEEeCCCC-CCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh--
Confidence 59999998641 00245789999999999863 3776 999999999999973
Q ss_pred HccCCCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccC
Q 002412 216 QWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAM 262 (926)
Q Consensus 216 ~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~ 262 (926)
.+ .++++|.|+|+.+||.|+.|++.++++. . +..+++++|..
T Consensus 131 -~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~ 172 (487)
T 2qyv_A 131 -ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTE 172 (487)
T ss_dssp -SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCC
T ss_pred -CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccC
Confidence 23 3678999999999999999999988532 2 25667777754
No 50
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.99 E-value=4.6e-10 Score=123.99 Aligned_cols=224 Identities=14% Similarity=0.100 Sum_probs=144.3
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEE
Q 002412 88 EAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVL 167 (926)
Q Consensus 88 rA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~ 167 (926)
+.++.|++|+++ |.+.|.+ +.+++||.+++++++.+. +.|.... .+ .+..|+++
T Consensus 18 ~~~~~l~~Lv~i-~s~sg~e--~~v~~~l~~~l~~~g~~v------~~d~~~~-------~~----------~~~gnlia 71 (321)
T 3cpx_A 18 QGMQLLKELCSI-HAPSGNE--EPLKDFILEYIRSNAGSW------SYQPVIY-------AD----------NDLQDCIV 71 (321)
T ss_dssp CHHHHHHHHHHS-CCBTTCC--HHHHHHHHHHHHHHGGGS------SSCCEEE-------CS----------GGGTTCEE
T ss_pred HHHHHHHHHHcC-CCCCCCH--HHHHHHHHHHHHhhCCeE------EEccccc-------cc----------cCCccEEE
Confidence 457789999997 5555543 367999999999998532 1111000 00 02479999
Q ss_pred EEcCCCCCcCCCCEEEEeeeccccc-----------C---------------------------------------CCC-
Q 002412 168 RIQPKYASEAAENAILVSSHIDTVF-----------A---------------------------------------AEG- 196 (926)
Q Consensus 168 ~i~g~~~~~~~~~~VLl~AH~DSv~-----------~---------------------------------------spG- 196 (926)
+++| . +.+++.||+|+|+ . .+|
T Consensus 72 ~~~g------~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd 144 (321)
T 3cpx_A 72 LVFG------N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGT 144 (321)
T ss_dssp EEES------S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTC
T ss_pred EecC------C-ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCC
Confidence 8754 2 4699999999983 0 122
Q ss_pred ------------------CCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEE
Q 002412 197 ------------------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAID 258 (926)
Q Consensus 197 ------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iN 258 (926)
+.||+.||++++|+++.+. + ++++|++.||.|+.|++....-....-+..++|+
T Consensus 145 ~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~~~~~~i~ 216 (321)
T 3cpx_A 145 EVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETFHVKQSLI 216 (321)
T ss_dssp EEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHHCCCEEEE
T ss_pred EEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccccCCCEEEE
Confidence 6899999999999998753 2 9999999999999999863210000123468899
Q ss_pred eccCCCC-------CCcceeecC--CChhHHHHHHHHccCCCCcchhhhhcccCCCCCCCChHHHhh-cCCCeEEEEEee
Q 002412 259 LEAMGIG-------GKSGLFQAG--PHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYT 328 (926)
Q Consensus 259 LD~~G~g-------G~~~lfq~g--~~~~li~~~~~~a~~p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~ 328 (926)
+|....+ |..+-...+ +++.+.+.+.+.++. .+... ..+. ..+.+||-..+.. ..|+|.+++.--
T Consensus 217 ~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~--q~~~--~~~GGsD~~~~~~s~~Gipt~~lG~~ 291 (321)
T 3cpx_A 217 CDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TDIPF--QLEV--EGAGASDGRELQLSPYPWDWCFIGAP 291 (321)
T ss_dssp CCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SSCCE--EEEE--CSSCCCHHHHHHHSSSCCBCCBEECE
T ss_pred EeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cCCCE--EEEe--CCCCCccHHHHHHhCCCCCEEEEchh
Confidence 9986542 222211112 256677777665432 22211 1111 1467899888842 379999976643
Q ss_pred CCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 002412 329 DKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ 362 (926)
Q Consensus 329 ~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~ 362 (926)
. ...||+. +.++.+++....+.+.+++..
T Consensus 292 ~--~~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 292 E--KDAHTPN---ECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp E--BSTTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred h--cccchhh---hheeHHHHHHHHHHHHHHHHh
Confidence 2 3479865 456678888888888877765
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=98.96 E-value=5.3e-09 Score=118.70 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002412 86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 165 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NV 165 (926)
.++..+.+++|.++ |.+.+ ++.++.+||.++|+++|. +++.+ . .+..||
T Consensus 31 ~~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~v~~~----~------------------~~~~nv 79 (404)
T 1ysj_A 31 HTRLINMRRDLHEH-PELSF--QEVETTKKIRRWLEEEQI------EILDV----P------------------QLKTGV 79 (404)
T ss_dssp HHHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHTTC------EECCC----T------------------TCSSCE
T ss_pred HHHHHHHHHHHHhc-CCCCC--ChHHHHHHHHHHHHHcCC------ceEEe----c------------------cCCceE
Confidence 46788999999996 44433 345789999999999983 22211 0 023699
Q ss_pred EEEEcCCCCCcCCCCEEEEeeecccccCCC-----------CC---CCchhHHHHHHHHHHHHHHccCCCCccEEEEEeC
Q 002412 166 VLRIQPKYASEAAENAILVSSHIDTVFAAE-----------GA---GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNT 231 (926)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~sp-----------GA---~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~ 231 (926)
+++++|+ .+++.|++.+|+|+||... |. .+.+.|++++|++++.|.+.+.+++++|+|+|+.
T Consensus 80 ~a~~~g~----~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 155 (404)
T 1ysj_A 80 IAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQP 155 (404)
T ss_dssp EEEEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEES
T ss_pred EEEEeCC----CCCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEec
Confidence 9999874 2357899999999998531 21 2245899999999999998766788999999999
Q ss_pred CcCCCCcchhHHhhcCCccCCceEEEEe
Q 002412 232 GEEEGLNGAHSFVTQHPWSTTIRVAIDL 259 (926)
Q Consensus 232 ~EE~gl~GS~~f~~~h~~~~~v~a~iNL 259 (926)
+||. ..|++.++++. ..+++.+++.+
T Consensus 156 ~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 156 AEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp CTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred cccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 9999 78999998643 33345666665
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.87 E-value=2.5e-08 Score=111.65 Aligned_cols=220 Identities=18% Similarity=0.211 Sum_probs=149.4
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEE
Q 002412 88 EAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVL 167 (926)
Q Consensus 88 rA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~ 167 (926)
+.++.|++|+++ |.+.|.++ .++++|+.+++++++. ++++| +..||++
T Consensus 10 ~~~~~l~~L~~i-pspSG~E~-~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNvi~ 57 (354)
T 2vpu_A 10 VDWKLMQEIIEA-PGVSGYEH-LGIRDIVVDVLKEVAD------EVKVD------------------------KLGNVIA 57 (354)
T ss_dssp CCHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHHTTCS------EEEEC------------------------TTCCEEE
T ss_pred HHHHHHHHHHhC-CCCCcccH-HHHHHHHHHHHHHhCC------EEEEc------------------------CCCeEEE
Confidence 357889999996 77777654 3789999999999873 34433 3468999
Q ss_pred EEcCCCCCcCCCCEEEEeeecccccC------------------------------------------------------
Q 002412 168 RIQPKYASEAAENAILVSSHIDTVFA------------------------------------------------------ 193 (926)
Q Consensus 168 ~i~g~~~~~~~~~~VLl~AH~DSv~~------------------------------------------------------ 193 (926)
+++|+ ++.|++.||+|+|+.
T Consensus 58 ~~~g~------~~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~ 131 (354)
T 2vpu_A 58 HFKGS------SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQE 131 (354)
T ss_dssp EECCS------SSEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC----
T ss_pred EEcCC------CCEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCccc
Confidence 88764 167899999999863
Q ss_pred ------------------------------------------------CCCCCCchhHHHHHHHHHHHHHHccCCCCccE
Q 002412 194 ------------------------------------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAV 225 (926)
Q Consensus 194 ------------------------------------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (926)
...+-||..||++++|+++.+++ ++.++
T Consensus 132 ~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v 207 (354)
T 2vpu_A 132 DKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADI 207 (354)
T ss_dssp -----CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEE
T ss_pred ccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeE
Confidence 04688999999999999998753 67999
Q ss_pred EEEEeCCcCCCCcchhHHhhcCCccCCceEEEEeccCCCCCCc------------cee-ecCC-ChhHHHHHHHHcc---
Q 002412 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGGKS------------GLF-QAGP-HPWAVENFAAAAK--- 288 (926)
Q Consensus 226 ~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gG~~------------~lf-q~g~-~~~li~~~~~~a~--- 288 (926)
+++|++-||.|+.|++..... ... ..+|.+|+.-++.+. .++ +..+ ++.+.+.+.+.++
T Consensus 208 ~~~ft~qEEVG~~ga~~aa~~--i~p--d~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~g 283 (354)
T 2vpu_A 208 YIVGSVQEEVGLRGARVASYA--INP--EVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYE 283 (354)
T ss_dssp EEEECSCCTTTSHHHHHHHHH--HCC--SEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEECCcccCccchhhhhcc--cCC--CEEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999998865522 112 256777754221111 012 2222 5677766655432
Q ss_pred CCCCcchhhhhcccCCCCCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHc
Q 002412 289 YPSGQVTAQDLFASGAITSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS 365 (926)
Q Consensus 289 ~p~~~~l~~~~f~~g~ips~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~ 365 (926)
.|+-. .... -+.+||-..+.. ..|+|..++..- .. ..|++. +.++.+.+.+..+.+.++++.+..
T Consensus 284 Ip~q~----~~~~---g~gGtDa~~i~~a~~Gipt~~Igvp-~~-~~Hs~~---E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 284 IPLQV----EPSP---RPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp CCCEE----EECC---SCCSSTHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCcEE----EeCC---CCCccHHHHHHHhcCCCCEEEECcc-cc-cCcCcc---eEeeHHHHHHHHHHHHHHHHhccH
Confidence 22211 1111 125899988753 368999986543 22 378874 466788888999999988887754
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.81 E-value=1.7e-08 Score=114.27 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceE
Q 002412 86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI 165 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NV 165 (926)
.++..+.+++|.++ |- -|.++.++.+||.++|+++|. +++.+. . | ...|+
T Consensus 15 ~~~~~~~~~~l~~~-pe--~s~~E~~~~~~i~~~l~~~G~------~v~~~~--~--------g-----------~~~~v 64 (394)
T 3ram_A 15 KYSYIEISHRIHER-PE--LGNEEIFASRTLIDRLKEHDF------EIETEI--A--------G-----------HATGF 64 (394)
T ss_dssp HHHHHHHHHHHHHS-CC--CTTCCHHHHHHHHHHHHHTTC------EEEEEE--T--------T-----------EEEEE
T ss_pred HHHHHHHHHHHHhC-CC--CCcchHHHHHHHHHHHHHcCC------eEEeCC--C--------C-----------CceEE
Confidence 45778888889885 33 344556899999999999983 344331 0 1 24699
Q ss_pred EEEEcCCCCCcCCCCEEEEeeecccccCC-CCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCC-Ccchh-H
Q 002412 166 VLRIQPKYASEAAENAILVSSHIDTVFAA-EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEG-LNGAH-S 242 (926)
Q Consensus 166 i~~i~g~~~~~~~~~~VLl~AH~DSv~~s-pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~g-l~GS~-~ 242 (926)
+++++|. .+.+.|++.+|+|+||.- .|.+.|. -.+++|.+++.|.+.+.+++++|.|+|+.+||.| ..|++ .
T Consensus 65 ia~~~g~----~~g~~i~l~ah~D~vpg~~ha~G~d~-~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~ 139 (394)
T 3ram_A 65 IATYDSG----LDGPAIGFLAEYDALPGLGHACGHNI-IGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKAS 139 (394)
T ss_dssp EEEEECS----SSSCEEEEEECCCCCTTTSSTTCHHH-HHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHH
T ss_pred EEEEeCC----CCCCEEEEEEecccCCCcceECCccH-HHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHH
Confidence 9999874 245899999999999831 2222333 3467889999998765567899999999999998 58999 7
Q ss_pred HhhcCCccCCceEEEEecc
Q 002412 243 FVTQHPWSTTIRVAIDLEA 261 (926)
Q Consensus 243 f~~~h~~~~~v~a~iNLD~ 261 (926)
++++ ...+++.+++.+|.
T Consensus 140 ~~~~-g~~~~~d~~~~~h~ 157 (394)
T 3ram_A 140 YVKA-GVIDQIDIALMIHP 157 (394)
T ss_dssp HHHH-TGGGGCSEEECCEE
T ss_pred HHHc-CCcccCCEEEEECC
Confidence 7754 23345777777764
No 54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.59 E-value=4.8e-07 Score=104.03 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccC----Ccc----------c-cccc
Q 002412 86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKS----GAN----------R-LVSG 150 (926)
Q Consensus 86 ~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~----g~~----------~-~~gg 150 (926)
.++..+..++|-++ |-. +.++.++.+||.++|+++|. +++........ |.. + ...|
T Consensus 13 ~~~~~~~~~~lh~~-Pe~--~~~E~~t~~~i~~~L~~~G~------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 13 APSMTQWRRDFHLH-AES--GWLEFRTASKVADILDGLGY------QLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHHHHT-CCC--TTCCHHHHHHHHHHHHHTTC------EEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC-CCC--CCcHHHHHHHHHHHHHHCCC------eEEecccccccccccccccchhhhhhhhhhcccc
Confidence 45677778888874 333 33455789999999999983 33221000000 000 0 0000
Q ss_pred cccccccccc--ccceEEEEEcCCCCCcCCCCEEEEeeecccccCC------------------CCCCC---chhHHHHH
Q 002412 151 AFMGRTLIYS--DLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA------------------EGAGD---CSSCVAVM 207 (926)
Q Consensus 151 ~~~~~~~~y~--~~~NVi~~i~g~~~~~~~~~~VLl~AH~DSv~~s------------------pGA~D---d~sgva~~ 207 (926)
......... +..||+++++|. .+.+.|++.+|+|+||.. +|..+ ...++|++
T Consensus 84 -~~~~~~~~~~~~~~~vva~~~~~----~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~ 158 (445)
T 3io1_A 84 -APERWLPAFEGGFAGVVATLDTG----RPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIG 158 (445)
T ss_dssp -CCTTTGGGGTTTCCCEEEEEECS----SCCCEEEEEEECCCCCC-------------------------CTTCTHHHHH
T ss_pred -ccccccccccCCCCEEEEEEeCC----CCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHH
Confidence 000000000 358999999875 345799999999999852 12111 12469999
Q ss_pred HHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcCCccCCceEEEEec
Q 002412 208 LELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAIDLE 260 (926)
Q Consensus 208 LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD 260 (926)
|++++.|.+.+.+++.+|.|+|..+|| +..|++.++++. ..+++.+++.+|
T Consensus 159 l~aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h 209 (445)
T 3io1_A 159 LGLAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIH 209 (445)
T ss_dssp HHHHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEE
T ss_pred HHHHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEe
Confidence 999999998777789999999999999 568999998543 334677777776
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.57 E-value=8.6e-07 Score=98.77 Aligned_cols=209 Identities=16% Similarity=0.241 Sum_probs=138.0
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEE
Q 002412 90 IKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRI 169 (926)
Q Consensus 90 ~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~~i 169 (926)
.+.|++|+++ |.+.|.++ ++++|+.+++++++. +++.| +..||++++
T Consensus 14 ~~~l~~L~~~-pspSG~E~--~v~~~i~~~l~~~~~------e~~~D------------------------~~Gnvi~~~ 60 (343)
T 3isx_A 14 KELIRKLTEA-FGPSGREE--EVRSIILEELEGHID------GHRID------------------------GLGNLIVWK 60 (343)
T ss_dssp HHHHHHHHHS-CCBTTCCH--HHHHHHHHHHTTTCS------EEEEC------------------------TTCCEEEEE
T ss_pred HHHHHHHHhC-CCCCCchH--HHHHHHHHHHHHhCC------EEEEC------------------------CCCCEEEEE
Confidence 4678999995 77877654 679999999999873 34443 457899987
Q ss_pred cCCCCCcCCCCEEEEeeecccccC--------------------------------------------------------
Q 002412 170 QPKYASEAAENAILVSSHIDTVFA-------------------------------------------------------- 193 (926)
Q Consensus 170 ~g~~~~~~~~~~VLl~AH~DSv~~-------------------------------------------------------- 193 (926)
|. +.+.|++.||+|+++.
T Consensus 61 -g~-----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~ 134 (343)
T 3isx_A 61 -GS-----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKL 134 (343)
T ss_dssp -CC-----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTC
T ss_pred -CC-----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCC
Confidence 42 3567999999999852
Q ss_pred ----------------------------------------CCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCc
Q 002412 194 ----------------------------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGE 233 (926)
Q Consensus 194 ----------------------------------------spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~E 233 (926)
...+.||..||++++|+++.+.. +++++++|+.-|
T Consensus 135 ~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qE 209 (343)
T 3isx_A 135 SFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQE 209 (343)
T ss_dssp CGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCC
T ss_pred CcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCc
Confidence 03588999999999999997642 689999999999
Q ss_pred CCCCcchhHHhhcCCccCCceEEEEeccCCCCC---------------Ccceeec-CC--ChhHHHHHHHHcc---CCCC
Q 002412 234 EEGLNGAHSFVTQHPWSTTIRVAIDLEAMGIGG---------------KSGLFQA-GP--HPWAVENFAAAAK---YPSG 292 (926)
Q Consensus 234 E~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gG---------------~~~lfq~-g~--~~~li~~~~~~a~---~p~~ 292 (926)
|.|+.|++..... ...+ .+|.+|+.-++. +.+-... +. ++.+++.+.+.++ -|+
T Consensus 210 EVG~~Ga~~aa~~--i~pd--~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~- 284 (343)
T 3isx_A 210 EVGLVGASVAGYG--VPAD--EAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKY- 284 (343)
T ss_dssp CTTSCCSTTTGGG--CCCS--EEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCC-
T ss_pred ccCchhHHHHhhc--CCCC--EEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCe-
Confidence 9999999865532 2222 467777642211 1111111 11 3455555554432 222
Q ss_pred cchhhhhcccCCC-CCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 002412 293 QVTAQDLFASGAI-TSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFL 360 (926)
Q Consensus 293 ~~l~~~~f~~g~i-ps~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv 360 (926)
|.... ..+||-..+.. ..|+|..++..-- . ..||+.- .++.+.+++..+.+.+++
T Consensus 285 --------Q~~v~~ggGTDa~~i~~a~~Gipt~~Igvp~-r-~~Hs~~E---~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 285 --------QMEVLTFGGTNAMGYQRTREGIPSATVSIPT-R-YVHSPSE---MIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp --------EECCCBCCCSSHHHHHHHTSSCCEEEEEEEE-B-STTSTTE---EECHHHHHHHHHHHHHHH
T ss_pred --------EEecCCCCchHHHHHHHhcCCCCEEEEcccc-c-cccchhh---EecHHHHHHHHHHHHHHH
Confidence 11112 25899877643 3699999876432 1 3788754 556777777777766654
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.26 E-value=1.2e-05 Score=86.14 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=43.7
Q ss_pred CCCCChHHHhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHcC
Q 002412 306 TSATDFQVYKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS 366 (926)
Q Consensus 306 ps~TD~~~F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~~ 366 (926)
+.+||-..|.. ..|+|.+.+.-- .. ..||+. ++++.+.+.+..+.+.+++++|.+-
T Consensus 294 ~ggTDa~~~~~~~~Giptv~~G~g-~~-~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 294 PTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp CCSSHHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccccHHHHHHHhcCCCCEEEECcc-cC-CCCccc---EEEEHHHHHHHHHHHHHHHHhCccc
Confidence 56899888753 269999987754 33 369975 6778899999999999999998764
No 57
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=91.91 E-value=0.26 Score=55.97 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcc
Q 002412 81 KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKE 125 (926)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~ 125 (926)
...++.++++++++.|++ .+|..||++++++++|+.++++++|.
T Consensus 10 ~~~i~~~~~~~~l~~Ls~-~~R~~Gs~g~~~a~~yi~~~~~~~Gl 53 (421)
T 2ek8_A 10 TKRTDAENMYNTIQFLSQ-APRVAGSPEELKAVRYIEQQFKSYGY 53 (421)
T ss_dssp HTTCCHHHHHHHHHHHTT-SCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 357999999999999998 59999999999999999999999984
No 58
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=91.64 E-value=0.21 Score=57.16 Aligned_cols=42 Identities=29% Similarity=0.319 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHHHHHHHhcc
Q 002412 84 FSEFEAIKHVKALT-ELGPHPVGSDALDRALQYVFAAAQKIKE 125 (926)
Q Consensus 84 fs~erA~~~L~~L~-~igpr~vGS~~~~~a~~yL~~~l~~ig~ 125 (926)
++.++++++|++|+ .+|+|..||++++++.+|+.++|++.|.
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 45578999999999 5999999999999999999999999984
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=90.73 E-value=0.47 Score=54.46 Aligned_cols=151 Identities=12% Similarity=0.023 Sum_probs=86.3
Q ss_pred CCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcC-------------C--------ccCCc
Q 002412 195 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQH-------------P--------WSTTI 253 (926)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h-------------~--------~~~~v 253 (926)
.++-||-.||.+++|+++.+ .++.++++++++-||.|+.|++.-.... + .+-.-
T Consensus 245 ~~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l~~ 319 (450)
T 2glf_A 245 AYGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVLEN 319 (450)
T ss_dssp ETTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHHHS
T ss_pred EecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhhcC
Confidence 36789999999999998865 3578999999999999988876422110 0 00012
Q ss_pred eEEEEeccCCCC------------------CCcceeecC---------CChhHHHHHHHH---ccCCCCcchhhhhcccC
Q 002412 254 RVAIDLEAMGIG------------------GKSGLFQAG---------PHPWAVENFAAA---AKYPSGQVTAQDLFASG 303 (926)
Q Consensus 254 ~a~iNLD~~G~g------------------G~~~lfq~g---------~~~~li~~~~~~---a~~p~~~~l~~~~f~~g 303 (926)
..+|..|++-+. |+.+-..++ +++.+...+.+. +.-|+ ..|..|
T Consensus 320 s~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~------Q~~~~g 393 (450)
T 2glf_A 320 TSVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIW------QVATLG 393 (450)
T ss_dssp CEEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCE------EECCSS
T ss_pred CeEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCE------EEEEec
Confidence 446666653321 221111112 245444444333 22332 112111
Q ss_pred --CCCCCCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 002412 304 --AITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLL 361 (926)
Q Consensus 304 --~ips~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~ 361 (926)
-.+++||-.++....|+|.+|+.-- .-.-||+..+...-| +.++.+.+.+++.
T Consensus 394 r~d~~gGstig~i~a~~Gi~tvdiGiP--~l~MHS~~E~~~~~D---~~~~~~l~~af~~ 448 (450)
T 2glf_A 394 KVDQGGGGTIAKFFAERGSDVIDMGPA--LLGMHSPFEISSKAD---LFETYVAYRSLME 448 (450)
T ss_dssp STTSCCCCCTHHHHHTTTSCEEEEECE--EBSTTSSSEEEEHHH---HHHHHHHHHHHHH
T ss_pred cCCCCCCCcHHHHHhCCCCcEEEechh--hcccchHHHHhhHHH---HHHHHHHHHHHHH
Confidence 2456788777666589999998732 124689887766443 4455555555444
No 60
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=89.91 E-value=0.4 Score=54.72 Aligned_cols=142 Identities=12% Similarity=0.026 Sum_probs=83.5
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHHhhcC-Cc-cCCc-------------eEEEE
Q 002412 194 AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-STTI-------------RVAID 258 (926)
Q Consensus 194 spGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f~~~h-~~-~~~v-------------~a~iN 258 (926)
...+.||..||+++||+++.+. +.+.+++++| +-||.|..|++.-.... +. .+++ ..+|.
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is 304 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVS 304 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEE
T ss_pred EeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEE
Confidence 3567999999999999998764 3567888888 99999999988754221 10 0111 57888
Q ss_pred eccCCCC------------------CCccee---ecC-CChhHHHHH---HHHccCCCCcchhhhhcccCCCCCCCChHH
Q 002412 259 LEAMGIG------------------GKSGLF---QAG-PHPWAVENF---AAAAKYPSGQVTAQDLFASGAITSATDFQV 313 (926)
Q Consensus 259 LD~~G~g------------------G~~~lf---q~g-~~~~li~~~---~~~a~~p~~~~l~~~~f~~g~ips~TD~~~ 313 (926)
.|+.-+. |..+-. |.+ +++.+...+ ++...-|+-. .+.+. -.+++||-.+
T Consensus 305 ~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~----~~~~~-d~~gGsd~g~ 379 (428)
T 2ijz_A 305 ADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQS----FVTRS-DMGCGSTIGP 379 (428)
T ss_dssp ECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCB----CCCCS-SCCCCCCCST
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEE----EEEeC-CCCccchHHH
Confidence 8875432 221111 111 244444333 2222333321 11111 1456788777
Q ss_pred Hhh-cCCCeEEEEEeeCCCCCCCCCCCCcCCCCHH
Q 002412 314 YKE-VAGLSGLDFAYTDKSAVYHTKNDKLDLLKPG 347 (926)
Q Consensus 314 F~~-~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~ 347 (926)
+.. ..|||.+|+.. ..-.-||++.+...-|..
T Consensus 380 i~~~~~Gi~tvdiGi--p~~~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 380 ITASQVGVRTVDIGL--PTFAMHSIRELAGSHDLA 412 (428)
T ss_dssp TTGGGGSCCEEEECC--CCCSCSSSSCCCCSSHHH
T ss_pred HHHhCCCCCEEEEch--hhcccchHHHHhhHHHHH
Confidence 743 47999999763 223569988776655543
No 61
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=82.79 E-value=1.6 Score=52.91 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhcc
Q 002412 82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKE 125 (926)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~vGS~~~~~a~~yL~~~l~~ig~ 125 (926)
..++.++++++|++|++ .||..||+++.++++|+.+++++.|.
T Consensus 20 ~~~~~~~i~~~l~~lt~-~ph~aGt~~~~~~a~yi~~~~~~~Gl 62 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTK-LPHLAGTEQNFLLAKKIQTQWKKFGL 62 (707)
T ss_dssp HHCCHHHHHHHHHHHSS-SCCCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHhc-CCCcCCCHhHHHHHHHHHHHHHHcCC
Confidence 46899999999999999 49999999999999999999999984
No 62
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=76.12 E-value=0.9 Score=54.45 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHhccc
Q 002412 83 GFSEFEAIKHVKALTE--LGPHPVGSDALDRALQYVFAAAQKIKET 126 (926)
Q Consensus 83 ~fs~erA~~~L~~L~~--igpr~vGS~~~~~a~~yL~~~l~~ig~~ 126 (926)
.++++++++||+.|++ ++||..||++++++++||.++++++|.+
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 3566789999999998 5899999999999999999999999853
No 63
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=74.62 E-value=2.8 Score=48.52 Aligned_cols=158 Identities=10% Similarity=-0.020 Sum_probs=84.7
Q ss_pred CCCCCchhHHHHHHHHHHHHHHcc----CCCCccEEEEEeCCcCCCCcchhHHhhcC-Cc-----------------cCC
Q 002412 195 EGAGDCSSCVAVMLELARAMSQWA----HGFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-----------------STT 252 (926)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~----~~p~~~I~Flf~~~EE~gl~GS~~f~~~h-~~-----------------~~~ 252 (926)
.++-||-.||.+++|+++.+.+.. ..+. ..++++++-||.|+.|++.-.... |. +-.
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~-~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~ 359 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADPH-VRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIP 359 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCS-EEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGG
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCCC-cEEEEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhh
Confidence 367899999999999998775310 0123 444999999999987776532100 00 011
Q ss_pred ceEEEEeccCCCC------------------CCcceeec----CCChhHHHHHHHH---ccCCCCcchhhhhcc-cCCCC
Q 002412 253 IRVAIDLEAMGIG------------------GKSGLFQA----GPHPWAVENFAAA---AKYPSGQVTAQDLFA-SGAIT 306 (926)
Q Consensus 253 v~a~iNLD~~G~g------------------G~~~lfq~----g~~~~li~~~~~~---a~~p~~~~l~~~~f~-~g~ip 306 (926)
-..+|..|++-+. |+.+-+.. .+++.+...+.+. ..-|+-. |. ....+
T Consensus 360 ~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~------~v~r~D~~ 433 (496)
T 3vat_A 360 KSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQD------LMVRNDSP 433 (496)
T ss_dssp GCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEE------ECCCTTSC
T ss_pred cCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEE------EEecCCCC
Confidence 2367777764221 22111111 1244444444332 3334321 11 11234
Q ss_pred C-CCChHHHhhcCCCeEEEEEeeCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHH
Q 002412 307 S-ATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAA 364 (926)
Q Consensus 307 s-~TD~~~F~~~~GIPgld~a~~~~~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La 364 (926)
+ +|+-.+.....|||.+++.-- .-+-||+.-+.+.-|. .++.+.+.++++.+.
T Consensus 434 gGgTig~i~~s~~Gi~tvdIGiP--~ryMHS~~E~~~~~D~---~~~v~Ll~af~~~~~ 487 (496)
T 3vat_A 434 CGTTIGPILASRLGLRVLDLGSP--QLAMHSIRETACTTGV---LQTITLFKGFFELFP 487 (496)
T ss_dssp CCCCHHHHHHHHHTCEEEEEECE--EESTTSSSEEEESHHH---HHHHHHHHHHHHHHH
T ss_pred CcchHHHHHhcccCCcEEEecHh--hhccccHHHHhhHHHH---HHHHHHHHHHHHhHH
Confidence 3 444444433479999998632 1246998877765554 455555555555544
No 64
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=73.26 E-value=1.2 Score=51.41 Aligned_cols=45 Identities=24% Similarity=0.237 Sum_probs=38.1
Q ss_pred CCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHH
Q 002412 195 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSF 243 (926)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f 243 (926)
.++.||..||.++||+++.+. .+++++++++++-||.|..|++.-
T Consensus 257 s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ga 301 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATGM 301 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTTS
T ss_pred EecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCcccccc
Confidence 357899999999999988653 467899999999999999888754
No 65
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=68.91 E-value=0.83 Score=52.55 Aligned_cols=46 Identities=22% Similarity=0.241 Sum_probs=32.4
Q ss_pred CCCCCchhHHHHHHHHHHHHHHccCCCCccEEEEEeCCcCCCCcchhHH
Q 002412 195 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSF 243 (926)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~Flf~~~EE~gl~GS~~f 243 (926)
.++.||..||+++||+++.+.+ .+++++++++++-||.|..|++.-
T Consensus 251 s~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 251 AYGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp ESSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred EecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 3578999999999999886532 467899999999999999888754
No 66
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=42.61 E-value=23 Score=24.44 Aligned_cols=18 Identities=17% Similarity=0.368 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002412 631 VILAVFIAVVLCLTLVYL 648 (926)
Q Consensus 631 ~~ia~~~a~~~~l~~~~l 648 (926)
-+||.++|+++++.|||-
T Consensus 7 eviaglvalltflafgfw 24 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFW 24 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 588999999999999974
No 67
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=36.29 E-value=55 Score=26.36 Aligned_cols=36 Identities=22% Similarity=0.489 Sum_probs=16.5
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCch
Q 002412 622 GGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKR 659 (926)
Q Consensus 622 ~~~pd~l~d~~ia~~~a~~~~l~~~~l~P~~~~~~~~~ 659 (926)
...|-|+ .++|++.++....+..+++=-+..|+|++
T Consensus 5 ~~vp~Wi--Ii~svl~GLLLL~Lii~~LwK~GFFKR~~ 40 (54)
T 2l8s_A 5 GRVPLWV--ILLSAFAGLLLLMLLILALWKIGFFKRPL 40 (54)
T ss_dssp CCCCTHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccCchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 3477773 34444433333333334444445565543
No 68
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=31.60 E-value=70 Score=27.34 Aligned_cols=60 Identities=17% Similarity=0.242 Sum_probs=46.3
Q ss_pred CCCCCCChHHHhhcCCCeEEEEEeeCC-CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHcCC
Q 002412 304 AITSATDFQVYKEVAGLSGLDFAYTDK-SAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASST 367 (926)
Q Consensus 304 ~ips~TD~~~F~~~~GIPgld~a~~~~-~~~YHT~~Dt~d~id~~slq~~g~~~l~lv~~La~~~ 367 (926)
..+..||-+.|+. .|+|.+.+.-... ...-|+.. |+++.+.+.+..+....+++.+.+.+
T Consensus 22 ~~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 22 IMPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp ECCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eeceeCcHHHHHH-cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcCC
Confidence 3467899999997 7999987664332 12467663 57788999999999999999998863
No 69
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=24.54 E-value=87 Score=35.71 Aligned_cols=65 Identities=9% Similarity=-0.101 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEEcCCCCCcCCCCEEEEeeec
Q 002412 109 LDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHI 188 (926)
Q Consensus 109 ~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~ 188 (926)
.-.+++++.++|++.|.+.-.+. +. .+. |+ +...-.+..||++...|+ ...+..++++||.
T Consensus 33 ~~h~v~~~~~~l~~~Gf~~l~e~----~~--l~~------g~----k~~~~r~~~~lia~~~g~---~~~~g~~ii~AH~ 93 (450)
T 2glf_A 33 ERMTVKEIKRILDESGFVPLEDF----AG--DPM------NM----TVYAVNRGKAIAAFRVVD---DLKRGLNLVVAHI 93 (450)
T ss_dssp HHHHHHHHHHHHHTTTCEETTSC----CS--CTT------SB----CEEEESSSSCEEEEEBCS---CGGGCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCcCEEcccc----cC--CCC------CC----EEEEEcCCCEEEEEEeCC---CCCCCeEEEEEec
Confidence 34678999999999885322211 10 111 11 000111237999987774 1224689999999
Q ss_pred cccc
Q 002412 189 DTVF 192 (926)
Q Consensus 189 DSv~ 192 (926)
|++.
T Consensus 94 Dsp~ 97 (450)
T 2glf_A 94 DSPR 97 (450)
T ss_dssp CCCE
T ss_pred ccCC
Confidence 9863
No 70
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=23.23 E-value=47 Score=37.66 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHHHHHHhccccCCceeEEEEEEeccCCcccccccccccccccccccceEEEEEcCCCCCcCCCCEEEE
Q 002412 105 GSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILV 184 (926)
Q Consensus 105 GS~~~~~a~~yL~~~l~~ig~~~~~~~~ve~d~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~VLl 184 (926)
.|+-.-.+++++.++|++.|.+.-.+ .+.+..+.| +.++ .-....||++...|+.- ...+..+++
T Consensus 14 ~~~t~~h~v~~~~~~l~~~Gf~~l~e----~~~w~l~~g-----~k~~-----~~~~~g~lia~~~G~~~-~~~~~~~ii 78 (428)
T 2ijz_A 14 ASPTPFHATASLARRLEAAGYRRLDE----RDAWHTETG-----GRYY-----VTRNDSSLIAIRLGRRS-PLESGFRLV 78 (428)
T ss_dssp TTHHHHHHHCCSHHHHHHHHHHHSCC------------C-----CCCE-----ECTTTTCCEEEECC--C-CSTTCCEEE
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEccc----ccccccCCC-----CEEE-----EECCCCEEEEEEECCcC-CCCCCcEEE
Confidence 46666688999999999998643221 122111111 0011 11133799998877520 113468999
Q ss_pred eeeccccc
Q 002412 185 SSHIDTVF 192 (926)
Q Consensus 185 ~AH~DSv~ 192 (926)
+||.|+..
T Consensus 79 ~AH~Dspg 86 (428)
T 2ijz_A 79 GAHTDSPC 86 (428)
T ss_dssp ECBCCCSE
T ss_pred EEcCCcCC
Confidence 99999974
No 71
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=22.99 E-value=1.4e+02 Score=24.07 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=15.1
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCch
Q 002412 623 GTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKR 659 (926)
Q Consensus 623 ~~pd~l~d~~ia~~~a~~~~l~~~~l~P~~~~~~~~~ 659 (926)
..|-|+ .++|++.+++...++.+++=-+..|+|++
T Consensus 9 ~vp~wi--Ii~svl~GLllL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 9 AIPIWW--VLVGVLGGLLLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp TCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred CcchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 467663 33433333333333333333344455543
Done!