BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002417
(926 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/820 (45%), Positives = 502/820 (61%), Gaps = 23/820 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK ++ + + + ++ NF G PG
Sbjct: 54 LGRSVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPG 113
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L+ + + + G + F N+WI++ K RI F NQ YLPS+TP
Sbjct: 114 AFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETP 173
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L ++RG+G GERK ERIYDY VYNDLG+PDK ++ ARPVL G + PYP
Sbjct: 174 APLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYP 233
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXX 351
RR RTGR PT+ DP ESR + VY+PRDE F +K + F + LK+V N
Sbjct: 234 RRGRTGRKPTRKDPNSESR---SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQS 290
Query: 352 XXXXXXX--XFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVGDRLFKYE 408
F F ++ LY+ G L D SK+ V+K+ F G++ K+
Sbjct: 291 AFDLNFTPREFDSFDEVHGLYSGGIKLPTDI----ISKISPLPVLKEIFRTDGEQALKFP 346
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P VI+ + AW+ D EFAR+ LAGVNP I LK+FP SKLD +YG S ITKE +
Sbjct: 347 PPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHL 406
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
E L GL+V++AI+ KRLF+LD+HD ++P++ +IN+ K YA+RT+ F G LRPL
Sbjct: 407 EPNLEGLTVDEAIQNKRLFLLDHHDPIMPYLRRINAT-STKAYATRTILFLKNDGTLRPL 465
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP + S ++ + IW LAKA+V ND+ HQLV+HWL THA
Sbjct: 466 AIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAV 525
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
+EP+IIAT+R LS +HPIYKLLHPH R T+ IN LAR SL+N GG+IE +F GRY++E+
Sbjct: 526 VEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEM 585
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
S+ YK W F +ALPADL++ RGMA EDPS P G+RLVIEDYPY DGL IW A
Sbjct: 586 SAVVYKD-WVFTDQALPADLIK-----RGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDA 639
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV YV +Y +++ D ELQA W E+ GH DK+NE WWPK++T+E+L
Sbjct: 640 IKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACA 699
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IWTAS HAA+NFGQYP+GG + NRPTL R+ +P++ YE+ NPQ +L ++
Sbjct: 700 IIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITP 759
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+ Q ++V + LS H+ DE YLG+ + + +W +D L F +F L +IE ++
Sbjct: 760 KFQTLIDLSVIEILSRHASDEVYLGERD--NPNWTSDTRALEAFKRFGNKLAQIENKLSE 817
Query: 887 RNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D +L+ RCG PY LLLPSS G+T RGIPNSISI
Sbjct: 818 RNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/820 (45%), Positives = 500/820 (60%), Gaps = 23/820 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK ++ + + + ++ NF G PG
Sbjct: 54 LGRSVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPG 113
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L+ + + + G + F N+WI++ K RI F NQ YLPS+TP
Sbjct: 114 AFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETP 173
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L ++RG+G GERK ERIYDY VYNDLG+PDK ++ ARPVL G + PYP
Sbjct: 174 APLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYP 233
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXX 351
RR RTGR PT+ DP ESR + VY+PRDE F +K + F + LK+V N
Sbjct: 234 RRGRTGRKPTRKDPNSESR---SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQS 290
Query: 352 XXXXXXX--XFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVGDRLFKYE 408
F F ++ LY+ G L D SK+ V+K+ F G++ K+
Sbjct: 291 AFDLNFTPREFDSFDEVHGLYSGGIKLPTDI----ISKISPLPVLKEIFRTDGEQALKFP 346
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P VI+ + AW+ D EFAR+ LAGVNP I LK+FP SKLD +YG S ITKE +
Sbjct: 347 PPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHL 406
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
E L GL+V++AI+ KRLF+LD+HD ++P++ +IN+ K YA+RT+ F G LRPL
Sbjct: 407 EPNLEGLTVDEAIQNKRLFLLDHHDPIMPYLRRINAT-STKAYATRTILFLKNDGTLRPL 465
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP + S ++ + IW LAKA+V ND+ HQLV+H L THA
Sbjct: 466 AIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAV 525
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
+EP+IIAT+R LS +HPIYKLLHPH R T+ IN LAR S +N GG+IE +F GRY++E+
Sbjct: 526 VEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEM 585
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
S+ YK W F +ALPADL++ RGMA EDPS P G+RLVIEDYPY DGL IW A
Sbjct: 586 SAVVYKD-WVFTDQALPADLIK-----RGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDA 639
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV YV +Y +++ D ELQA W E+ GH DK+NE WWPK++T+E+L
Sbjct: 640 IKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACA 699
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IWTAS HAA+NFGQYP+GG + NRPTL R+ +P++ YE+ NPQ +L ++
Sbjct: 700 IIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITP 759
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+ Q ++V + LS H+ DE YLG+ + + +W +D L F +F L +IE ++
Sbjct: 760 KFQTLIDLSVIEILSRHASDEVYLGERD--NPNWTSDTRALEAFKRFGNKLAQIENKLSE 817
Query: 887 RNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D +L+ RCG PY LLLPSS G+T RGIPNSISI
Sbjct: 818 RNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/823 (44%), Positives = 496/823 (60%), Gaps = 25/823 (3%)
Query: 111 VNGIGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFG 170
V + I IQLIS + +RG + P + Y+A F SDFG
Sbjct: 49 VTFLASSISIQLISATKADGGKGKVGKATNLRGKITLPTIGAKEE--AYDAQFDWDSDFG 106
Query: 171 NPGAILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPS 229
PGA I N EFYL +++ + G + F N+W+++ K RI F N YLPS
Sbjct: 107 IPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPS 166
Query: 230 QTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERP 289
+TPA + R E+L ++RG+G GERK +RIYDY VYNDLG+PDK + ARPVL G P
Sbjct: 167 ETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGSALP 226
Query: 290 YPRRCRTGRPPTKTDPLCESRIEKPHP-VYVPRDETFEEIKQNTFSSGRLKAVLHNX--X 346
YPRR RTGR T+ DP EKP VY+PRDE F +K + F + +K+V +
Sbjct: 227 YPRRGRTGRGKTRKDP----NSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPV 282
Query: 347 XXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVGDRLF 405
F F+++ KLY G L N S + +IK+ F G++
Sbjct: 283 LTDAFDGNLLSLDFDNFAEVRKLYEGGVTLP----TNFLSNITPIPIIKELFRTDGEQFL 338
Query: 406 KYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITK 465
KY P V++ D+ AW+ D EFAR+T+AG+NP I+ ++EFP+ SKLD YG ITK
Sbjct: 339 KYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITK 398
Query: 466 ELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGML 525
E +E L GL+VE+AI+ K+LFILD+HD L+P++ KIN+ KTYA+RT+FF G L
Sbjct: 399 EHLEPNLGGLTVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTL 457
Query: 526 RPLAIELSLPPSRSSPQN--KHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMT 583
PLAIELS P + +Y + +IW LAKA+V NDA HQ+++HWL T
Sbjct: 458 TPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNT 517
Query: 584 HASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA 643
HA +EP++IAT+R LS +HPIYKLL PH R T+ IN+LAR+SL+N GIIE +F GRY+
Sbjct: 518 HAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYS 577
Query: 644 MELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLI 703
+E+S+ YK W F +ALP DL++ RG+A +DPS P GVRL+IEDYPYA+DGL I
Sbjct: 578 LEMSAVIYKD-WVFTDQALPNDLVK-----RGVAVKDPSAPHGVRLLIEDYPYASDGLEI 631
Query: 704 WCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSG 763
W AIK WVE YV+ +Y + D ELQAWW E+ GH D +++ WW K++T+E+L
Sbjct: 632 WDAIKSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVE 691
Query: 764 IITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSS 823
+IW AS HAA+NFGQYP+GG + NRPT+ R+ +P++ P Y+ NP+ FL +
Sbjct: 692 ASATLIWIASALHAAVNFGQYPYGGLILNRPTISRRFMPEKGSPEYDALAKNPEKEFLKT 751
Query: 824 LPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKI 883
+ + + + + + LS H+ DE YLGQ + +W +D L F +F NLEEIEK
Sbjct: 752 ITGKKETLIDLTIIEILSRHASDEFYLGQRDG-GDYWTSDAGPLEAFKRFGKNLEEIEKK 810
Query: 884 INTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
+ +N D L+ R G PY LL PSS G+T RGIPNSISI
Sbjct: 811 LIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/821 (44%), Positives = 494/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 494/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI+E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIVETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 494/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI+E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGILETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/821 (44%), Positives = 493/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 493/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 493/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFG+YP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGEYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 493/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ H+L++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHELMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 493/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIGETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 492/821 (59%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFG YP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGNYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 493/821 (60%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA++FGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVHFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 492/821 (59%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+ FGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVGFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/821 (44%), Positives = 492/821 (59%), Gaps = 25/821 (3%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ H L++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHALMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCA 706
SSA YK+ W F +ALPADL++ RG+A +DPS P GVRL+IEDYPYAADGL IW A
Sbjct: 567 SSAVYKN-WVFTDQALPADLIK-----RGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAA 620
Query: 707 IKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 766
IK WV+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL +
Sbjct: 621 IKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCL 680
Query: 767 IMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPT 826
I+IW AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ +
Sbjct: 681 IIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740
Query: 827 QLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINT 886
+L ++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ +
Sbjct: 741 KLPTLISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVR 798
Query: 887 RNKDFRLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
RN D L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 799 RNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/830 (44%), Positives = 498/830 (60%), Gaps = 44/830 (5%)
Query: 114 IGQGIMIQLISEDIDPVTNSGK-SVESAVRGWLPK-PVTSSNVN----IFQYEANFGVPS 167
+G+ I +QLIS + +GK E + LP P + + F+++A+FG+P
Sbjct: 62 LGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIP- 120
Query: 168 DFGNPGAILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAY 226
GA I N EF+L+ + + + G + F N+W+++ + ++RI F N Y
Sbjct: 121 -----GAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTY 175
Query: 227 LPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGE 286
LPS TPA + R+E+ +RG+G G+RK +RIYDY VYNDLGNPD RP+L G
Sbjct: 176 LPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRPILGGC 233
Query: 287 E-RPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNX 345
PYP R RTGR T+TDP EKP VYVPRDE F +K + F + +K++ H+
Sbjct: 234 SIYPYPLRVRTGRERTRTDP----NSEKPGEVYVPRDENFGHLKSSDFLTYGIKSLSHDV 289
Query: 346 X---XXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVG 401
F F D+ LY G L D S++ +K+ F G
Sbjct: 290 IPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDI----LSQISPLPALKEIFRTDG 345
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+ + ++ P V + + + D EFAR+ +AGVNP I L+EFP S LDP +YG S
Sbjct: 346 ENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTS 405
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNK 521
ITKE +E + G++VE+A+ +RLFILDY D +P++ +INSLP K YA+RT+ F
Sbjct: 406 TITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKD 465
Query: 522 AGMLRPLAIELSLP-PSRSSPQNKHIY----THGHDATTHWIWKLAKAHVCSNDAGVHQL 576
G L+PLAIELS P P + + I T G D+T IW LAKAHV ND+G HQL
Sbjct: 466 DGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDST---IWLLAKAHVIVNDSGYHQL 522
Query: 577 VNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEAS 636
V+HWL THA MEP+ IAT+R LS +HPIYKLL+PH R T+ IN LARQSLIN GIIE S
Sbjct: 523 VSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKS 582
Query: 637 FSPGRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPY 696
F PG+Y++E+SS+ YK+ W F +ALPADL++ RG+A EDPS P G+RLVIEDYPY
Sbjct: 583 FLPGKYSIEMSSSVYKN-WVFTHQALPADLVK-----RGLAIEDPSAPHGLRLVIEDYPY 636
Query: 697 AADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLE 756
A DGL IW AIK WV YV+ +Y +V D ELQAWW E KGH D + + WWPK +
Sbjct: 637 AVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQ 696
Query: 757 TKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNP 816
T EDL +I++WTAS HAA+NFGQYP+GG + NRPTL R+ +P E P Y++ + NP
Sbjct: 697 TTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNP 756
Query: 817 QHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSAN 876
Q +L ++ + + ++V + LS H+ DE YLG+ + +W D + L F +F +
Sbjct: 757 QKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGE--RETPNWTTDKKALEAFKRFGSK 814
Query: 877 LEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
L IE IN RN D L+ R G PY LL SS G+T +GIPNSISI
Sbjct: 815 LTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 248/523 (47%), Gaps = 81/523 (15%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 599 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 646
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 647 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 706
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 707 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 760
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ LI GGI++ S S G
Sbjct: 761 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGG 820
Query: 643 AMELSSAAYKSFWRFDMEA--LPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADG 700
+ K F +++ LP L + RG+ +DPS G + Y DG
Sbjct: 821 GH--VTFMEKCFKEVNLQDYHLPNALKK-----RGV--DDPSKLPG-------FYYRDDG 864
Query: 701 LLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPK 754
L +W AI+ ++ +A FY + V D E+Q+W ++ N GH D A
Sbjct: 865 LALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---S 921
Query: 755 LETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLL 814
E++E L ++T +++T S QHAA+NF Q G+ PN P ++R P++
Sbjct: 922 FESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA------ 975
Query: 815 NPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFS 874
+ LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F
Sbjct: 976 -TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQ 1031
Query: 875 ANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 917
LE+I K I RN++ + PY LLP P T
Sbjct: 1032 DKLEDISKKIKQRNENLEV---------PYIYLLPERIPNGTA 1065
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 248/523 (47%), Gaps = 81/523 (15%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 229 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 276
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 337 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 390
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ LI GGI++ S S G
Sbjct: 391 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGG 450
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADG 700
+ K F +++ LP L + RG+ +DPS G + Y DG
Sbjct: 451 GH--VTFMEKCFKEVNLQDYHLPNALKK-----RGV--DDPSKLPG-------FYYRDDG 494
Query: 701 LLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPK 754
L +W AI+ ++ +A FY + V D E+Q+W ++ N GH D A
Sbjct: 495 LALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---S 551
Query: 755 LETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLL 814
E++E L ++T +++T S QHAA+NF Q G+ PN P ++R P++
Sbjct: 552 FESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA------ 605
Query: 815 NPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFS 874
+ LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F
Sbjct: 606 -TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQ 661
Query: 875 ANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 917
LE+I K I RN++ + PY LLP P T
Sbjct: 662 DKLEDISKKIKQRNENLEV---------PYIYLLPERIPNGTA 695
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 248/523 (47%), Gaps = 81/523 (15%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 232 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 279
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 280 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 339
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 340 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 393
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HP++KLL PH+ L I+ + R+ LI GGI++ S S G
Sbjct: 394 THLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGG 453
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADG 700
+ K F +++ LP L + RG+ +DPS G + Y DG
Sbjct: 454 GH--VTFMEKCFKEVNLQDYHLPNALKK-----RGV--DDPSKLPG-------FYYRDDG 497
Query: 701 LLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPK 754
L +W AI+ ++ +A FY + V D E+Q+W ++ N GH D A
Sbjct: 498 LALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---S 554
Query: 755 LETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLL 814
E++E L ++T +++T S QHAA+NF Q G+ PN P ++R P++
Sbjct: 555 FESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPPKKKGEA------ 608
Query: 815 NPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFS 874
+ LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F
Sbjct: 609 -TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQ 664
Query: 875 ANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 917
LE+I K I RN++ + PY LLP P T
Sbjct: 665 DKLEDISKKIKQRNENLEV---------PYIYLLPERIPNGTA 698
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 247/523 (47%), Gaps = 81/523 (15%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 229 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 276
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 337 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 390
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ L GGI++ S S G
Sbjct: 391 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGGIVDQSLSLGGG 450
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADG 700
+ K F +++ LP L + RG+ +DPS G + Y DG
Sbjct: 451 GH--VTFMEKCFKEVNLQDYHLPNALKK-----RGV--DDPSKLPG-------FYYRDDG 494
Query: 701 LLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPK 754
L +W AI+ ++ +A FY + V D E+Q+W ++ N GH D A
Sbjct: 495 LALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---S 551
Query: 755 LETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLL 814
E++E L ++T +++T S QHAA+NF Q G+ PN P ++R P++
Sbjct: 552 FESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA------ 605
Query: 815 NPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFS 874
+ LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F
Sbjct: 606 -TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQ 661
Query: 875 ANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 917
LE+I K I RN++ + PY LLP P T
Sbjct: 662 DKLEDISKKIKQRNENLEV---------PYIYLLPERIPNGTA 695
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 247/523 (47%), Gaps = 81/523 (15%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 229 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 276
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 337 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 390
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ L GGI++ S S G
Sbjct: 391 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGGIVDQSLSLGGG 450
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADG 700
+ K F +++ LP L + RG+ +DPS G + Y DG
Sbjct: 451 GH--VTFMEKCFKEVNLQDYHLPNALKK-----RGV--DDPSKLPG-------FYYRDDG 494
Query: 701 LLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPK 754
L +W AI+ ++ +A FY + V D E+Q+W ++ N GH D A
Sbjct: 495 LALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---S 551
Query: 755 LETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLL 814
E++E L ++T +++T S QHAA+NF Q G+ PN P ++R P++
Sbjct: 552 FESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA------ 605
Query: 815 NPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFS 874
+ LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F
Sbjct: 606 -TLQSILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQ 661
Query: 875 ANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 917
LE+I K I RN++ + PY LLP P T
Sbjct: 662 DKLEDISKKIKQRNENLEV---------PYIYLLPERIPNGTA 695
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 240/513 (46%), Gaps = 71/513 (13%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NP ++ + D P + E++E+ L G ++E
Sbjct: 251 WRDDVWFGSQFLNGSNP---------EVIRRCDKL---PENFPVKNEMVEKLLDRGYTLE 298
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGM-LRPLAIELSLPPS 537
KA++E +FI DY +L I +++ D++ + FY K + P+AI+L P
Sbjct: 299 KAMKEGLIFITDYK--ILEGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLYQQPG 356
Query: 538 RSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQ 597
+N I+T D T W W +AK + D HQ++ H L H MEP +++ R
Sbjct: 357 ----ENNSIWTPLKD--TEWDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWRN 410
Query: 598 LSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA-MELSSAAYKSFWR 656
L S+HP++KLL+PH + + IN L R LI GG + S G + L Y+S
Sbjct: 411 LPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSV-T 469
Query: 657 FDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVA 716
FD L DL + RG+ G+R + Y D LL+W I ++V+ +
Sbjct: 470 FDSYDLVKDLRQ-----RGV--------DGLR----KFYYKDDALLLWNVIHQFVQDIIQ 512
Query: 717 HFYSEPNSVTSDVELQAWWSEIKNKGH---HDKRNEAWWPKLETKEDLSGIITIMIWTAS 773
+Y++ +SV D E+Q W ++ G+ D ++ E +E+L +T++++T S
Sbjct: 513 IYYNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFENREELVHFLTVVVFTCS 572
Query: 774 GQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKV 833
QHAA+NF Q G+ PN PTLMR+ P E K + ++SL + QA +
Sbjct: 573 CQHAAVNFSQMATYGFHPNSPTLMRQPPPTEKGKSNHKVI-------MASLANKHQAVTM 625
Query: 834 MAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRL 893
++V + L+T P E++LG + D KF +NL I K I RN+
Sbjct: 626 VSVVNALTTIYPTEKFLG---DYADNLFGDAAAHAAMAKFKSNLANITKQITERNQGM-- 680
Query: 894 KGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
+ PY L+P +PNSI+I
Sbjct: 681 -------VSPYTWLIPGH--------VPNSIAI 698
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 248/515 (48%), Gaps = 75/515 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELH-GLSVE 478
W D F Q L G NPV I E P KL +T E++E L LS+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--EKL----------PVTTEMVECSLERQLSLE 291
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPP 536
+ +++ +FI+D+ LL I+ + P + A + + N A + P+AI+L+ P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 537 SRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHR 596
+P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +R
Sbjct: 350 GDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 597 QLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFW 655
QL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A K
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLT 462
Query: 656 RFDM---EALPADLLRSDKIVRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 711
+ EA+ A RGM ++ED I Y Y DGLL+W AI+ +
Sbjct: 463 YASLCFPEAIKA---------RGMESKED----------IPYYFYRDDGLLVWEAIRTFT 503
Query: 712 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 771
V +Y V D ELQ + +++ G +++ + ++++E LS +T++I+T
Sbjct: 504 AEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFT 563
Query: 772 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 831
AS QHAA+NFGQY + ++PN P MR P K ++ + + +LP + ++
Sbjct: 564 ASAQHAAVNFGQYDWASWIPNAPPTMRA------PPPTAKGVVTIEQ-IVDTLPDRGRSC 616
Query: 832 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 891
+ LS +E +LG + H+I P V +F NLE I +I RN++
Sbjct: 617 WHLGAVWALSQFQENELFLGMYPE--EHFIEKP-VKEAMARFRKNLEAIVSVIAERNENL 673
Query: 892 RLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
+L PY L P IPNS++I
Sbjct: 674 QL---------PYYYLAPDR--------IPNSVAI 691
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 248/515 (48%), Gaps = 75/515 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELH-GLSVE 478
W D F Q L G NPV I E P KL +T E++E L LS+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--EKL----------PVTTEMVECSLERQLSLE 291
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPP 536
+ +++ +FI+D+ LL I+ + P + A + + N A + P+AI+L+ P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 537 SRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHR 596
+P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +R
Sbjct: 350 GDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 597 QLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFW 655
QL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A K
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLT 462
Query: 656 RFDM---EALPADLLRSDKIVRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 711
+ EA+ A RGM ++ED I Y Y DGLL+W AI+ +
Sbjct: 463 YASLCFPEAIKA---------RGMESKED----------IPYYFYRDDGLLVWEAIRTFT 503
Query: 712 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 771
V +Y V D ELQ + +++ G +++ + ++++E LS +T++I+T
Sbjct: 504 AEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFT 563
Query: 772 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 831
AS QHAA+NFGQY + ++PN P MR P K ++ + + +LP + ++
Sbjct: 564 ASAQHAAVNFGQYDWASWIPNAPPTMRA------PPPTAKGVVTIEQ-IVDTLPDRGRSC 616
Query: 832 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 891
+ LS +E +LG + H+I P V +F NLE I +I RN++
Sbjct: 617 WHLGAVWALSQFQENELFLGMYPE--EHFIEKP-VKEAMARFRKNLEAIVSVIAERNENL 673
Query: 892 RLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
+L PY L P IPNS++I
Sbjct: 674 QL---------PYYYLSPDR--------IPNSVAI 691
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 248/515 (48%), Gaps = 75/515 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELH-GLSVE 478
W D F Q L G NPV I E P KL +T E++E L LS+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--EKL----------PVTTEMVECSLERQLSLE 291
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPP 536
+ +++ +FI+D+ LL I+ + P + A + + N A + P+AI+L+ P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 537 SRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHR 596
+P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +R
Sbjct: 350 GDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 597 QLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFW 655
QL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A K
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLT 462
Query: 656 RFDM---EALPADLLRSDKIVRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 711
+ EA+ A RGM ++ED I Y Y DGLL+W AI+ +
Sbjct: 463 YASLCFPEAIKA---------RGMESKED----------IPYYFYRDDGLLVWEAIRTFT 503
Query: 712 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 771
V +Y V D ELQ + +++ G +++ + ++++E LS +T++I+T
Sbjct: 504 AEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFT 563
Query: 772 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 831
AS QHAA+NFGQY + ++PN P MR P K ++ + + +LP + ++
Sbjct: 564 ASAQHAAVNFGQYDWASWIPNAPPTMRA------PPPTAKGVVTIEQ-IVDTLPDRGRSC 616
Query: 832 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 891
+ LS +E +LG + H+I P V +F NLE I +I RN++
Sbjct: 617 WHLGAVWALSQFQENELFLGMYPE--EHFIEKP-VKEAMARFRKNLEAIVSVIAERNENL 673
Query: 892 RLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
+L PY L P IPNS++I
Sbjct: 674 QL---------PYYYLDPDR--------IPNSVAI 691
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 228/513 (44%), Gaps = 66/513 (12%)
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+R+F + RR R +W D+ F Q L G NP+ + + P P +
Sbjct: 204 NRIFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM------ 257
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFF-YN 520
EEL +EK ++ LF D+ LL I+ L ++ A+ V
Sbjct: 258 --------EELQA-QLEKELKAGTLFEADFA--LLDNIKANVILYCQQYLAAPLVMLKLQ 306
Query: 521 KAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 580
G L P+ I+L LP SSP + T +W LAK V S+D VH+L +H
Sbjct: 307 PDGKLMPMVIQLHLPKIGSSPPPLFLPTD-----PPMVWLLAKCWVRSSDFQVHELNSHL 361
Query: 581 LMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP- 639
L H E + +AT R L S+HP++KL+ PH+RYTLEIN AR L++ GI + S
Sbjct: 362 LRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTG 421
Query: 640 --GRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYA 697
G + + A+ ++ F P D D RG+ L +E YA
Sbjct: 422 GGGHVQLLQQAGAFLTYRSF----CPPD----DLADRGL------------LGVESSFYA 461
Query: 698 ADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLET 757
D L +W I +V+ + +Y +V D+ELQ+W EI G + + + L++
Sbjct: 462 QDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQS 521
Query: 758 KEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQ 817
+T+ I+T +GQH++I+ GQ + +VPN P MR P D E
Sbjct: 522 VAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE------- 574
Query: 818 HTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANL 877
T +++LP Q++ M++ L P LGQ + + + PE + +KF L
Sbjct: 575 -TVMATLPNLKQSSLQMSIVWQLGRDQPIMVPLGQHQE---EYFSGPEPRAVLEKFREEL 630
Query: 878 EEIEKIINTRNKDFRLKGRCGAGIPPYELLLPS 910
++K I RN+ + PYE L PS
Sbjct: 631 AIMDKEIEVRNEKLDI---------PYEYLRPS 654
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 149/513 (29%), Positives = 228/513 (44%), Gaps = 66/513 (12%)
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+R+F + RR R +W D+ F Q L G NP+ + + P P +
Sbjct: 204 NRIFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM------ 257
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFF-YN 520
EEL +EK ++ LF D+ LL I+ L ++ A+ V
Sbjct: 258 --------EELQA-QLEKELKAGTLFEADFA--LLDNIKANVILYCQQYLAAPLVMLKLQ 306
Query: 521 KAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 580
G L P+ I+L LP SSP + T +W LAK V S+D VH+L +H
Sbjct: 307 PDGKLMPMVIQLHLPKIGSSPPPLFLPTD-----PPMVWLLAKCWVRSSDFQVHELNSHL 361
Query: 581 LMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP- 639
L H E + +AT R L S+HP++KL+ PH+RYTLEIN AR L++ GI + S
Sbjct: 362 LRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTG 421
Query: 640 --GRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYA 697
G + + A+ ++ F P D D RG+ L +E YA
Sbjct: 422 GGGHVQLLQQAGAFLTYRSF----CPPD----DLADRGL------------LGVESSFYA 461
Query: 698 ADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLET 757
D L +W I +V+ + +Y +V D+ELQ+W EI G + + + L++
Sbjct: 462 QDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQS 521
Query: 758 KEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQ 817
+T+ I+T +GQH++I+ GQ + +VPN P MR P D E
Sbjct: 522 VAQACHFVTMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE------- 574
Query: 818 HTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANL 877
T +++LP Q++ M++ L P LGQ + + + PE + +KF L
Sbjct: 575 -TVMATLPNLHQSSLQMSIVWQLGRDQPIMVPLGQHQE---EYFSGPEPRAVLEKFREEL 630
Query: 878 EEIEKIINTRNKDFRLKGRCGAGIPPYELLLPS 910
++K I RN+ + PYE L PS
Sbjct: 631 AIMDKEIEVRNEKLDI---------PYEYLRPS 654
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 227/533 (42%), Gaps = 74/533 (13%)
Query: 398 LNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYG 457
L+ +R+F + R R +W D F Q L G NP+ + E P K P +
Sbjct: 111 LDSFNRIFWSGQSKLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVELPARLKFPPGM-- 168
Query: 458 PPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVF 517
EEL +EK ++ LF D+ LL I+ L ++ A V
Sbjct: 169 ------------EELQA-QLEKELQGGTLFEADFS--LLDGIKANVILSSQQYLAVPLVM 213
Query: 518 F-YNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQL 576
G L P+ I+L LP S + T +W LAK V S+D +H+L
Sbjct: 214 LKLQPDGKLLPMVIQLQLPREGSPLPPLFLPT-----DPPMVWLLAKCWVRSSDFQLHEL 268
Query: 577 VNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEAS 636
+H L H E +AT R L S+HPI+KLL PH RYT+EIN AR L++ GI +
Sbjct: 269 HSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQV 328
Query: 637 FSP---GRYAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIED 693
S G + +AA ++ F P D D RG+ L +E
Sbjct: 329 VSTGGGGHVELLRRAAALLTYSSF----CPPD----DLADRGL------------LGVES 368
Query: 694 YPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWP 753
YA D L +W I +VE V+ Y SV D ELQAW E G ++ +
Sbjct: 369 SFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDRGFPV 428
Query: 754 KLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFL 813
L++KE L +T+ I+T +GQH++ + GQ + +VPN P MR P D E
Sbjct: 429 SLQSKEQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTTKDATLE--- 485
Query: 814 LNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKF 873
T +++LP QA+ M++ L P LGQ + + + P + KF
Sbjct: 486 -----TVMATLPNFHQASLQMSITWQLGRCQPTMVALGQHEE---EYFSGPGPKAVLTKF 537
Query: 874 SANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 926
L ++K I RN L PYE L PS + NS++I
Sbjct: 538 REELAALDKDIEVRNAKLAL---------PYEYLRPSR--------VENSVAI 573
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 151/514 (29%), Positives = 223/514 (43%), Gaps = 65/514 (12%)
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
D++F + A+ + R W D F+ Q L G NP+ + P L +
Sbjct: 50 DQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVLPSGM------ 103
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFY 519
EEL +EK ++ LF D+ +LL I N + K Y A +
Sbjct: 104 --------EELRA-QLEKELQNGSLFEADF--ILLDGIPA-NVIRGEKQYLAAPLVMLKM 151
Query: 520 NKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNH 579
G L+P+ I++ P S + + A W LAK+ V ++D +H++ H
Sbjct: 152 EPNGKLQPMVIQIQPPNPSSPTPTLFLPSDPPLA-----WLLAKSWVRNSDFQLHEIQYH 206
Query: 580 WLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP 639
L TH E +AT R L +HPI+K L PH+RYT+EIN AR LI+ GGI + + S
Sbjct: 207 LLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVST 266
Query: 640 GR--YAMELSSAAYKSFWRFDMEALPADLLRSDKIVRGMAEEDPSMPSGVRLVIEDYPYA 697
G + L AA + + P D D RG+ +P + YA
Sbjct: 267 GGGGHVQLLRRAAAQLTY---CSLCPPD----DLADRGLL----GLPGAL--------YA 307
Query: 698 ADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLET 757
D L +W I +VE V FY + V D ELQAW EI G ++ + ++
Sbjct: 308 HDALRLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQS 367
Query: 758 KEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQ 817
+ L +T+ ++T + QHAAIN GQ + +VPN P MR P +
Sbjct: 368 QSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTKED-------VTM 420
Query: 818 HTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANL 877
T + SLP QA MA+ LS PD LG + + + P+ + ++F +L
Sbjct: 421 ATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE---KYFSGPKPKAVLNQFRTDL 477
Query: 878 EEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSS 911
E++EK I RN+ PYE L PS
Sbjct: 478 EKLEKEITARNEQLDW---------PYEYLKPSC 502
>pdb|1KEA|A Chain A, Structure Of A Thermostable Thymine-Dna Glycosylase
Length = 221
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 379 DDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAG-VNPV 437
DD N + K+F++T++ F N R F + RD + L R+T AG V +
Sbjct: 2 DDATNKKRKVFVSTIL-TFWNTDRRDFPWRHT----RDPYVILITEILLRRTTAGHVKKI 56
Query: 438 NIEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLP 497
+F ++ I P+S I K++ E L E+ E R+ I DY +
Sbjct: 57 YDKFFVKYKCFED----ILKTPKSEIAKDIKEIGLSNQRAEQLKELARVVINDYGGRVPR 112
Query: 498 FIEKINSLPDRKTYASRTVF---FYNKAGML 525
+ I LP Y V F KA M+
Sbjct: 113 NRKAILDLPGVGKYTCAAVMCLAFGKKAAMV 143
>pdb|3NYB|A Chain A, Structure And Function Of The Polymerase Core Of Tramp, A
Rna Surveillance Complex
Length = 323
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 171 NPGAILIT--NLHGKEFYLLEIVVHGFDGGPVFFPANTW 207
N G +LI L+GK F ++ + DG PV+FP +TW
Sbjct: 213 NLGVLLIEFFELYGKNFGYDDVALGSSDGYPVYFPKSTW 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,761,192
Number of Sequences: 62578
Number of extensions: 1246595
Number of successful extensions: 3152
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2915
Number of HSP's gapped (non-prelim): 42
length of query: 926
length of database: 14,973,337
effective HSP length: 108
effective length of query: 818
effective length of database: 8,214,913
effective search space: 6719798834
effective search space used: 6719798834
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)