Query 002420
Match_columns 925
No_of_seqs 321 out of 973
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 01:39:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002420.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002420hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyx_A ORF K3, K3RING; zinc-bi 99.7 1.7E-17 5.9E-22 139.7 3.3 59 65-125 2-60 (60)
2 2d8s_A Cellular modulator of i 99.6 3.3E-16 1.1E-20 139.2 4.8 64 66-129 12-75 (80)
3 2ep4_A Ring finger protein 24; 98.0 3.9E-06 1.3E-10 72.1 4.8 52 65-123 11-63 (74)
4 2ct0_A Non-SMC element 1 homol 98.0 4.7E-06 1.6E-10 72.9 4.1 53 67-125 13-65 (74)
5 2kiz_A E3 ubiquitin-protein li 98.0 5E-06 1.7E-10 70.4 4.1 54 64-124 9-63 (69)
6 2ect_A Ring finger protein 126 97.9 4.9E-06 1.7E-10 72.2 3.6 56 64-126 10-66 (78)
7 2ct2_A Tripartite motif protei 97.8 1.4E-05 4.9E-10 70.4 4.9 57 64-125 10-69 (88)
8 2ecl_A Ring-box protein 2; RNF 97.8 7.9E-06 2.7E-10 72.1 3.1 53 68-126 14-78 (81)
9 1iym_A EL5; ring-H2 finger, ub 97.8 9.5E-06 3.2E-10 65.5 2.5 51 67-123 3-54 (55)
10 2yur_A Retinoblastoma-binding 97.8 2E-05 6.8E-10 68.0 4.7 53 65-124 11-64 (74)
11 2l0b_A E3 ubiquitin-protein li 97.7 1.3E-05 4.3E-10 72.2 2.6 51 66-123 37-88 (91)
12 1x4j_A Ring finger protein 38; 97.7 1.2E-05 4E-10 69.4 1.7 51 66-123 20-71 (75)
13 3dpl_R Ring-box protein 1; ubi 97.6 2.9E-05 9.8E-10 72.4 4.2 51 68-125 36-102 (106)
14 2csy_A Zinc finger protein 183 97.6 4.1E-05 1.4E-09 67.0 4.6 51 64-123 10-60 (81)
15 2ea6_A Ring finger protein 4; 97.6 2E-05 6.9E-10 66.2 2.2 52 65-123 11-67 (69)
16 2ecm_A Ring finger and CHY zin 97.6 3.5E-05 1.2E-09 62.0 3.5 48 68-122 4-53 (55)
17 2ysl_A Tripartite motif-contai 97.6 4.2E-05 1.4E-09 65.2 4.0 55 64-125 15-70 (73)
18 2d8t_A Dactylidin, ring finger 97.6 2.8E-05 9.6E-10 66.4 2.7 52 66-126 12-63 (71)
19 2ecy_A TNF receptor-associated 97.5 3.8E-05 1.3E-09 64.5 3.2 55 65-127 11-65 (66)
20 1v87_A Deltex protein 2; ring- 97.5 3.9E-05 1.3E-09 71.3 3.4 52 69-125 25-95 (114)
21 1e4u_A Transcriptional repress 97.4 0.0001 3.5E-09 64.9 4.6 58 67-128 9-66 (78)
22 2ecn_A Ring finger protein 141 97.4 3.8E-05 1.3E-09 65.1 1.3 49 66-124 12-60 (70)
23 3k1l_B Fancl; UBC, ring, RWD, 97.4 6.9E-05 2.3E-09 82.5 3.3 60 64-123 303-372 (381)
24 4a0k_B E3 ubiquitin-protein li 97.4 3.2E-05 1.1E-09 73.3 0.4 53 68-125 47-113 (117)
25 2djb_A Polycomb group ring fin 97.3 0.00014 4.9E-09 62.1 4.3 53 65-126 11-64 (72)
26 2ecw_A Tripartite motif-contai 97.3 0.00024 8.3E-09 61.7 5.8 53 66-125 16-72 (85)
27 3ztg_A E3 ubiquitin-protein li 97.3 0.00014 4.8E-09 64.9 3.7 54 64-123 8-61 (92)
28 2ysj_A Tripartite motif-contai 97.3 0.0003 1E-08 58.3 5.3 48 64-118 15-63 (63)
29 2ecv_A Tripartite motif-contai 97.2 0.0004 1.4E-08 60.3 5.9 54 65-125 15-72 (85)
30 1chc_A Equine herpes virus-1 r 97.2 0.0002 6.7E-09 60.2 3.4 49 67-123 3-51 (68)
31 2ecj_A Tripartite motif-contai 97.2 0.00027 9.3E-09 57.3 4.1 47 65-118 11-58 (58)
32 3ng2_A RNF4, snurf, ring finge 97.1 0.00016 5.6E-09 61.1 1.8 51 67-124 8-63 (71)
33 2egp_A Tripartite motif-contai 97.0 0.0002 6.8E-09 61.8 1.6 54 65-125 8-66 (79)
34 2xeu_A Ring finger protein 4; 96.9 0.00021 7.1E-09 59.0 1.1 50 68-124 2-56 (64)
35 1t1h_A Gspef-atpub14, armadill 96.7 0.00086 2.9E-08 57.9 3.3 52 66-125 5-56 (78)
36 3lrq_A E3 ubiquitin-protein li 96.7 0.00053 1.8E-08 62.6 1.9 55 65-126 18-72 (100)
37 2ckl_B Ubiquitin ligase protei 96.7 0.00068 2.3E-08 67.1 2.8 52 67-125 52-103 (165)
38 3fl2_A E3 ubiquitin-protein li 96.6 0.00065 2.2E-08 64.1 1.8 50 67-124 50-99 (124)
39 4ayc_A E3 ubiquitin-protein li 96.4 0.00066 2.3E-08 65.4 0.5 48 68-124 52-99 (138)
40 1z6u_A NP95-like ring finger p 96.3 0.0014 4.8E-08 64.4 2.7 52 67-126 76-127 (150)
41 1g25_A CDK-activating kinase a 96.3 0.0012 4.2E-08 55.0 2.0 51 68-124 2-55 (65)
42 1jm7_A BRCA1, breast cancer ty 96.1 0.0016 5.6E-08 59.8 1.8 51 68-125 20-71 (112)
43 2y1n_A E3 ubiquitin-protein li 96.1 0.0023 8E-08 72.0 3.4 52 68-127 331-382 (389)
44 2y43_A E3 ubiquitin-protein li 96.1 0.0014 4.7E-08 59.4 1.2 49 67-124 20-69 (99)
45 3hct_A TNF receptor-associated 96.0 0.0028 9.6E-08 59.3 2.9 52 67-126 16-67 (118)
46 2ckl_A Polycomb group ring fin 95.9 0.0026 9E-08 58.5 1.9 51 65-124 11-62 (108)
47 1rmd_A RAG1; V(D)J recombinati 95.8 0.003 1E-07 58.8 2.0 51 67-125 21-71 (116)
48 3l11_A E3 ubiquitin-protein li 95.6 0.0014 4.9E-08 60.8 -1.2 49 68-124 14-62 (115)
49 4ap4_A E3 ubiquitin ligase RNF 95.4 0.0027 9.2E-08 59.5 0.2 53 67-126 5-62 (133)
50 1bor_A Transcription factor PM 95.2 0.0044 1.5E-07 50.5 0.7 49 65-125 2-50 (56)
51 2ea5_A Cell growth regulator w 95.1 0.013 4.5E-07 49.9 3.5 54 63-129 9-64 (68)
52 2vje_B MDM4 protein; proto-onc 94.9 0.0078 2.7E-07 50.4 1.5 50 65-123 3-55 (63)
53 4ap4_A E3 ubiquitin ligase RNF 94.8 0.0042 1.4E-07 58.2 -0.5 54 67-125 70-126 (133)
54 4ic3_A E3 ubiquitin-protein li 94.5 0.0024 8.3E-08 55.0 -2.6 47 65-124 20-67 (74)
55 3nw0_A Non-structural maintena 94.5 0.021 7.2E-07 60.3 4.0 53 67-125 178-230 (238)
56 1wgm_A Ubiquitin conjugation f 94.1 0.035 1.2E-06 50.7 3.8 51 67-125 20-70 (98)
57 2kr4_A Ubiquitin conjugation f 94.0 0.036 1.2E-06 49.0 3.8 51 66-125 11-61 (85)
58 2kre_A Ubiquitin conjugation f 94.0 0.038 1.3E-06 50.6 4.0 51 65-124 25-75 (100)
59 2c2l_A CHIP, carboxy terminus 93.6 0.032 1.1E-06 58.7 3.1 51 67-125 206-256 (281)
60 1jm7_B BARD1, BRCA1-associated 93.6 0.012 4E-07 55.0 -0.3 48 66-124 19-67 (117)
61 3knv_A TNF receptor-associated 93.4 0.021 7.1E-07 55.5 1.2 52 65-124 27-78 (141)
62 3hcs_A TNF receptor-associated 92.9 0.047 1.6E-06 54.0 2.8 53 65-125 14-66 (170)
63 2ecg_A Baculoviral IAP repeat- 92.7 0.023 7.8E-07 48.9 0.3 45 67-124 23-68 (75)
64 2vje_A E3 ubiquitin-protein li 92.5 0.054 1.9E-06 45.3 2.3 47 68-123 7-56 (64)
65 3htk_C E3 SUMO-protein ligase 91.5 0.095 3.3E-06 56.0 3.3 55 65-125 177-233 (267)
66 2f42_A STIP1 homology and U-bo 91.4 0.073 2.5E-06 53.9 2.3 51 67-125 104-154 (179)
67 2yu4_A E3 SUMO-protein ligase 90.1 0.15 5.1E-06 45.8 2.8 48 67-121 5-59 (94)
68 1wim_A KIAA0161 protein; ring 88.5 0.18 6.3E-06 44.9 2.2 53 68-125 4-65 (94)
69 2lri_C Autoimmune regulator; Z 87.0 0.27 9.2E-06 41.8 2.2 50 65-121 8-59 (66)
70 1wen_A Inhibitor of growth fam 86.3 0.3 1E-05 42.1 2.1 50 64-121 11-65 (71)
71 3t6p_A Baculoviral IAP repeat- 85.9 0.12 3.9E-06 57.6 -0.9 46 66-124 292-338 (345)
72 1wev_A Riken cDNA 1110020M19; 84.7 0.11 3.9E-06 46.5 -1.3 58 65-125 12-76 (88)
73 1weu_A Inhibitor of growth fam 84.5 0.46 1.6E-05 43.0 2.5 50 64-121 31-85 (91)
74 2l43_A N-teminal domain from h 83.0 0.17 5.9E-06 45.3 -0.9 54 65-121 21-75 (88)
75 2ku3_A Bromodomain-containing 83.0 0.23 7.9E-06 42.8 -0.1 52 67-121 14-66 (71)
76 2yho_A E3 ubiquitin-protein li 81.5 0.12 4.2E-06 45.1 -2.4 51 66-129 15-67 (79)
77 2k16_A Transcription initiatio 81.2 0.2 7E-06 43.1 -1.1 54 65-122 14-69 (75)
78 2bay_A PRE-mRNA splicing facto 79.1 0.84 2.9E-05 37.9 2.0 48 70-125 4-51 (61)
79 2l5u_A Chromodomain-helicase-D 76.5 0.82 2.8E-05 38.0 1.2 50 65-121 7-58 (61)
80 2ri7_A Nucleosome-remodeling f 71.6 0.69 2.4E-05 45.9 -0.5 52 67-122 6-60 (174)
81 1wep_A PHF8; structural genomi 71.6 1.8 6.2E-05 37.6 2.3 53 66-122 9-64 (79)
82 3u5n_A E3 ubiquitin-protein li 71.4 0.45 1.5E-05 48.8 -2.0 52 65-123 3-56 (207)
83 1we9_A PHD finger family prote 68.1 0.88 3E-05 37.9 -0.5 52 67-121 4-58 (64)
84 1wem_A Death associated transc 67.0 2.2 7.5E-05 36.8 1.8 51 67-122 14-71 (76)
85 3ql9_A Transcriptional regulat 66.4 3.9 0.00013 39.2 3.5 50 64-120 52-110 (129)
86 2vnf_A ING 4, P29ING4, inhibit 64.9 0.69 2.4E-05 38.4 -1.8 48 65-120 6-58 (60)
87 2lbm_A Transcriptional regulat 64.4 3.7 0.00013 40.0 3.0 49 65-120 59-116 (142)
88 1weo_A Cellulose synthase, cat 64.3 11 0.00038 33.9 5.7 55 67-124 14-70 (93)
89 2e6r_A Jumonji/ARID domain-con 63.2 0.75 2.6E-05 41.5 -2.0 53 65-121 12-66 (92)
90 3o70_A PHD finger protein 13; 62.7 1.1 3.7E-05 38.2 -1.0 55 61-120 11-66 (68)
91 3kv5_D JMJC domain-containing 62.2 1 3.5E-05 52.2 -1.6 52 67-122 35-89 (488)
92 2ysm_A Myeloid/lymphoid or mix 62.0 1.5 5.2E-05 40.4 -0.2 38 67-108 5-42 (111)
93 4gne_A Histone-lysine N-methyl 60.3 2.4 8.1E-05 39.4 0.8 48 64-118 10-59 (107)
94 1wew_A DNA-binding family prot 59.6 3.1 0.00011 36.1 1.4 54 65-121 12-72 (78)
95 3o36_A Transcription intermedi 58.9 1.5 5E-05 44.1 -1.0 48 68-122 3-52 (184)
96 2yt5_A Metal-response element- 56.8 1.2 4E-05 37.3 -1.8 53 66-121 3-61 (66)
97 1f62_A Transcription factor WS 56.6 3.3 0.00011 32.8 0.9 46 71-120 2-49 (51)
98 2jmi_A Protein YNG1, ING1 homo 54.9 1.3 4.4E-05 40.0 -2.0 50 64-120 21-75 (90)
99 1mm2_A MI2-beta; PHD, zinc fin 54.9 1.7 5.9E-05 36.0 -1.0 50 65-121 5-56 (61)
100 3c6w_A P28ING5, inhibitor of g 52.6 1.5 5.2E-05 36.3 -1.7 47 66-120 6-57 (59)
101 1wee_A PHD finger family prote 52.0 4.8 0.00017 34.3 1.3 54 64-121 11-66 (72)
102 2yql_A PHD finger protein 21A; 51.6 1.5 5.1E-05 35.7 -1.9 47 67-120 7-55 (56)
103 3v43_A Histone acetyltransfera 50.8 6.9 0.00024 36.2 2.2 34 68-104 4-42 (112)
104 2lv9_A Histone-lysine N-methyl 46.7 7.8 0.00027 35.1 1.9 48 68-120 27-75 (98)
105 1fp0_A KAP-1 corepressor; PHD 45.5 4.9 0.00017 36.1 0.3 51 65-122 21-73 (88)
106 2puy_A PHD finger protein 21A; 45.0 2.2 7.4E-05 35.2 -2.0 48 68-122 4-53 (60)
107 2vpb_A Hpygo1, pygopus homolog 44.1 8.9 0.0003 32.3 1.7 50 67-119 6-64 (65)
108 2kwj_A Zinc finger protein DPF 43.5 6.2 0.00021 36.6 0.7 34 70-106 2-41 (114)
109 3ask_A E3 ubiquitin-protein li 43.4 5.8 0.0002 41.5 0.5 49 69-121 174-225 (226)
110 2g6q_A Inhibitor of growth pro 42.6 1.5 5.3E-05 36.6 -3.2 49 65-120 7-59 (62)
111 3i2d_A E3 SUMO-protein ligase 38.9 25 0.00086 39.3 4.7 42 82-126 256-302 (371)
112 3kqi_A GRC5, PHD finger protei 38.4 4.7 0.00016 34.7 -0.9 52 67-122 8-62 (75)
113 3v43_A Histone acetyltransfera 38.1 6.5 0.00022 36.4 -0.1 48 70-120 62-111 (112)
114 2kgg_A Histone demethylase jar 35.7 7.6 0.00026 31.0 -0.1 46 71-119 4-52 (52)
115 2ro1_A Transcription intermedi 35.0 6.4 0.00022 39.8 -0.7 47 69-122 2-50 (189)
116 1xwh_A Autoimmune regulator; P 30.8 5.5 0.00019 33.4 -1.7 48 67-121 6-55 (66)
117 1x4i_A Inhibitor of growth pro 30.3 7.2 0.00025 33.3 -1.1 50 67-123 4-57 (70)
118 2rsd_A E3 SUMO-protein ligase 29.1 4.8 0.00017 34.0 -2.4 50 68-120 9-64 (68)
119 2e6s_A E3 ubiquitin-protein li 27.9 9.5 0.00033 33.2 -0.8 47 70-120 27-76 (77)
120 3lqh_A Histone-lysine N-methyl 27.6 18 0.00061 36.5 1.1 51 69-122 2-64 (183)
121 4fo9_A E3 SUMO-protein ligase 27.6 49 0.0017 36.8 4.6 41 82-125 222-267 (360)
122 3asl_A E3 ubiquitin-protein li 26.5 7.2 0.00025 33.2 -1.8 47 71-121 20-69 (70)
123 2yrc_A Protein transport prote 22.6 11 0.00038 31.3 -1.3 35 94-130 17-51 (59)
124 2ko5_A Ring finger protein Z; 21.3 1.2E+02 0.0042 27.5 5.1 48 68-125 27-74 (99)
125 2xb1_A Pygopus homolog 2, B-ce 21.0 26 0.00091 32.0 0.8 53 69-123 3-63 (105)
No 1
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=99.67 E-value=1.7e-17 Score=139.73 Aligned_cols=59 Identities=32% Similarity=0.763 Sum_probs=52.4
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
|+++++.||||+++. +++++.||+|+||+++||++||++|++++++.+||+||++|+++
T Consensus 2 e~~~~~~CrIC~~~~--~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~r 60 (60)
T 1vyx_A 2 EDEDVPVCWICNEEL--GNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNTR 60 (60)
T ss_dssp TTCSCCEETTTTEEC--SCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCCC
T ss_pred CCCCCCEeEEeecCC--CCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeecC
Confidence 345778999999864 45789999999999999999999999999899999999999863
No 2
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=3.3e-16 Score=139.23 Aligned_cols=64 Identities=45% Similarity=1.038 Sum_probs=57.1
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeeccccc
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYA 129 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~iy~ 129 (925)
+++++.|+||+++.+.+++++.||+|+|++|++|++||++|++++++.+||+||++|.+...+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~~~~ 75 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLS 75 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCCCSC
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCcccC
Confidence 3456899999998877788999999999999999999999999998899999999999876544
No 3
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=3.9e-06 Score=72.05 Aligned_cols=52 Identities=29% Similarity=0.754 Sum_probs=38.7
Q ss_pred cccCCCcceEeCCCCCCCCCc-ccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 65 EEEEEEVCRICRNPGDPENPL-RYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l-~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
+.+++..|.||++........ ..|| .|.+|.+|+.+|++.+ ..||+|++++.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C-----~H~f~~~Ci~~~~~~~--~~CP~Cr~~~~ 63 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPC-----KHAFHRKCLIKWLEVR--KVCPLCNMPVL 63 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETT-----TEEEEHHHHHHHHHHC--SBCTTTCCBCS
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCC-----CCEecHHHHHHHHHcC--CcCCCcCcccc
Confidence 445668999999876543332 2354 3789999999999865 48999999874
No 4
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.96 E-value=4.7e-06 Score=72.90 Aligned_cols=53 Identities=15% Similarity=0.475 Sum_probs=42.0
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+..+.|-||++...++. +|..+.+-+|..|+.+|++.+++.+||+|++++...
T Consensus 13 ~~i~~C~IC~~~i~~g~------~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQ------SCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp SSSCBCSSSCCBCSSSE------ECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred CCCCcCcchhhHcccCC------ccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 45688999998765432 233556889999999999888778999999998764
No 5
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.95 E-value=5e-06 Score=70.42 Aligned_cols=54 Identities=33% Similarity=0.753 Sum_probs=40.4
Q ss_pred ccccCCCcceEeCCCCCCC-CCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 64 EEEEEEEVCRICRNPGDPE-NPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~-~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
++.+++..|.||++....+ .+...||. |.+|..|+.+|++.+ ..||+|+.++..
T Consensus 9 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 9 TEEDTEEKCTICLSILEEGEDVRRLPCM-----HLFHQVCVDQWLITN--KKCPICRVDIEA 63 (69)
T ss_dssp CSTTCCCSBTTTTBCCCSSSCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCSBSCS
T ss_pred CcCCCCCCCeeCCccccCCCcEEEeCCC-----CHHHHHHHHHHHHcC--CCCcCcCccccC
Confidence 3445678899999865433 34456653 779999999999875 479999998754
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.92 E-value=4.9e-06 Score=72.17 Aligned_cols=56 Identities=21% Similarity=0.655 Sum_probs=41.7
Q ss_pred ccccCCCcceEeCCCCCCCCC-cccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 64 EEEEEEEVCRICRNPGDPENP-LRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~-l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
++.+++..|.||++....... ...||. |.+|..|+.+|++.+ .+||+|+.++....
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 10 EHVGSGLECPVCKEDYALGESVRQLPCN-----HLFHDSCIVPWLEQH--DSCPVCRKSLTGQN 66 (78)
T ss_dssp TTSSSSCCCTTTTSCCCTTSCEEECTTS-----CEEETTTTHHHHTTT--CSCTTTCCCCCCSC
T ss_pred ccCCCCCCCeeCCccccCCCCEEEeCCC-----CeecHHHHHHHHHcC--CcCcCcCCccCCcc
Confidence 444567899999987654333 234653 789999999999654 69999999987654
No 7
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.82 E-value=1.4e-05 Score=70.44 Aligned_cols=57 Identities=25% Similarity=0.492 Sum_probs=43.5
Q ss_pred ccccCCCcceEeCCCCCCCC--CcccccCCCCCcceecHHHHHHHHHcc-CCCcccccccceeec
Q 002420 64 EEEEEEEVCRICRNPGDPEN--PLRYPCACSGSIKFVHQDCLLQWLNHS-NARQCEVCKHAFSFS 125 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~--~l~~PC~C~Gs~~~vH~~CL~~Wl~~s-~~~~CelCk~~f~~~ 125 (925)
++.++...|.||++....++ +...||. |.+|..|+.+|++.+ +...||+|+..+...
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLLHCG-----HTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEECSSS-----CEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred hhccCCCCCccCCccccccCCCeEECCCC-----ChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 34456688999998765433 5556653 789999999999875 467999999998764
No 8
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.81 E-value=7.9e-06 Score=72.06 Aligned_cols=53 Identities=23% Similarity=0.661 Sum_probs=37.3
Q ss_pred CCCcceEeCCCCCC-----------CC-CcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 68 EEEVCRICRNPGDP-----------EN-PLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 68 ~~~~CrIC~~~~~~-----------~~-~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
+++.|.||+++.+. ++ ....| .|. |.+|.+|+.+|++.+ .+||+||+++.+..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~-~C~---H~FH~~Ci~~Wl~~~--~~CP~CR~~~~~~~ 78 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWG-ECN---HSFHNCCMSLWVKQN--NRCPLCQQDWVVQR 78 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEE-TTS---CEEEHHHHHHHTTTC--CBCTTTCCBCCEEE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeC-CCC---CccChHHHHHHHHhC--CCCCCcCCCcchhh
Confidence 34668888876532 22 22333 343 889999999999765 59999999987654
No 9
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.76 E-value=9.5e-06 Score=65.51 Aligned_cols=51 Identities=20% Similarity=0.552 Sum_probs=37.4
Q ss_pred cCCCcceEeCCCCCCCC-CcccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 67 EEEEVCRICRNPGDPEN-PLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~-~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
+++..|.||+++.+.++ +...| .| .|.+|.+|+.+|++. +.+||+|++++.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~-~C---~H~f~~~Ci~~w~~~--~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLP-RC---GHGFHAECVDMWLGS--HSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECS-SS---CCEECTTHHHHTTTT--CCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECC-CC---CCcccHHHHHHHHHc--CCcCcCCCCEeE
Confidence 35578999998765433 33344 23 378999999999965 468999998764
No 10
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=97.76 E-value=2e-05 Score=68.03 Aligned_cols=53 Identities=21% Similarity=0.449 Sum_probs=40.9
Q ss_pred cccCCCcceEeCCCCCCCCCcccc-cCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYP-CACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~P-C~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+.+++..|.||++... +|...| | .|.+|..|+.+|++.++...||+|+.++..
T Consensus 11 ~~~~~~~C~IC~~~~~--~p~~~~~C-----gH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2yur_A 11 PIPDELLCLICKDIMT--DAVVIPCC-----GNSYCDECIRTALLESDEHTCPTCHQNDVS 64 (74)
T ss_dssp CSCGGGSCSSSCCCCT--TCEECSSS-----CCEECTTHHHHHHHHSSSSCCSSSCCSSCC
T ss_pred cCCCCCCCcCCChHHh--CCeEcCCC-----CCHHHHHHHHHHHHhcCCCcCCCCCCcCCC
Confidence 3445678999987543 466555 4 378999999999998777899999997643
No 11
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.70 E-value=1.3e-05 Score=72.19 Aligned_cols=51 Identities=27% Similarity=0.732 Sum_probs=38.3
Q ss_pred ccCCCcceEeCCCCCCCC-CcccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 66 EEEEEVCRICRNPGDPEN-PLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~-~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
.+++..|.||+++...++ +...||. |.+|..|+.+|++. +..||+|++++.
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~-----H~Fh~~Ci~~wl~~--~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCH-----HYFHKPCVSIWLQK--SGTCPVCRCMFP 88 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTT-----EEEEHHHHHHHHTT--TCBCTTTCCBSS
T ss_pred cCCCCCCcccChhhcCCCcEEecCCC-----ChHHHHHHHHHHHc--CCcCcCcCccCC
Confidence 356688999997655433 3345654 78999999999965 459999998764
No 12
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.66 E-value=1.2e-05 Score=69.42 Aligned_cols=51 Identities=24% Similarity=0.671 Sum_probs=38.4
Q ss_pred ccCCCcceEeCCCCCCCCC-cccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 66 EEEEEVCRICRNPGDPENP-LRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~-l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
.++...|.||++..+.++. ...||. |.+|.+|+.+|++.+ ..||+|++++.
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~-----H~fh~~Ci~~w~~~~--~~CP~Cr~~~~ 71 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCN-----HEFHAKCVDKWLKAN--RTCPICRADSG 71 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTT-----EEEETTHHHHHHHHC--SSCTTTCCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCC-----CHhHHHHHHHHHHcC--CcCcCcCCcCC
Confidence 3466889999976554333 345653 789999999999764 58999998764
No 13
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.65 E-value=2.9e-05 Score=72.37 Aligned_cols=51 Identities=24% Similarity=0.503 Sum_probs=37.0
Q ss_pred CCCcceEeCCCCCCCC---------------Cc-ccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 68 EEEVCRICRNPGDPEN---------------PL-RYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~---------------~l-~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+.+.|-||++..+... ++ ..|| .|.+|..|+.+|++. +.+||+|+.+|.+.
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C-----~H~FH~~Ci~~Wl~~--~~~CP~Cr~~~~~~ 102 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVC-----NHAFHFHCISRWLKT--RQVCPLDNREWEFQ 102 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETT-----SCEEEHHHHHHHHTT--CSBCSSSCSBCCEE
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeeccc-----CcEECHHHHHHHHHc--CCcCcCCCCcceee
Confidence 4578999987644221 11 1333 388999999999975 47899999998764
No 14
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.62 E-value=4.1e-05 Score=66.95 Aligned_cols=51 Identities=29% Similarity=0.648 Sum_probs=39.9
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
++.++...|.||++.. .+|...||. |.+|..|+.+|++. ...||+|+.++.
T Consensus 10 ~~~~~~~~C~IC~~~~--~~p~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 60 (81)
T 2csy_A 10 EEEEIPFRCFICRQAF--QNPVVTKCR-----HYFCESCALEHFRA--TPRCYICDQPTG 60 (81)
T ss_dssp SCCCCCSBCSSSCSBC--CSEEECTTS-----CEEEHHHHHHHHHH--CSBCSSSCCBCC
T ss_pred ccCCCCCCCcCCCchh--cCeeEccCC-----CHhHHHHHHHHHHC--CCcCCCcCcccc
Confidence 4455678999998765 346666664 77999999999975 469999999885
No 15
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.60 E-value=2e-05 Score=66.15 Aligned_cols=52 Identities=19% Similarity=0.468 Sum_probs=37.7
Q ss_pred cccCCCcceEeCCCCCC----CC-CcccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 65 EEEEEEVCRICRNPGDP----EN-PLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~----~~-~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
..++...|.||++.... .+ +...||. |.+|.+|+.+|++. +..||+|+.++.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKIN 67 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSS-----CEEEHHHHHHHHHH--CSSCTTTCCCCC
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCC-----ChhcHHHHHHHHHc--CCCCCCCCCccC
Confidence 33566889999976431 11 1345553 78999999999986 469999999874
No 16
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=97.59 E-value=3.5e-05 Score=62.00 Aligned_cols=48 Identities=21% Similarity=0.524 Sum_probs=37.4
Q ss_pred CCCcceEeCCCCCC--CCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccce
Q 002420 68 EEEVCRICRNPGDP--ENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAF 122 (925)
Q Consensus 68 ~~~~CrIC~~~~~~--~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f 122 (925)
++..|.||++.... +.+...||. |.+|.+|+.+|++.+ ..||+|+.++
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~ 53 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCG-----HLLHRTCYEEMLKEG--YRCPLCSGPS 53 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTS-----CEEETTHHHHHHHHT--CCCTTSCCSS
T ss_pred CCCcCcccChhhcCCCcCeEecCCC-----CcccHHHHHHHHHcC--CcCCCCCCcC
Confidence 46789999987533 224456763 789999999999876 7999999876
No 17
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.58 E-value=4.2e-05 Score=65.19 Aligned_cols=55 Identities=22% Similarity=0.471 Sum_probs=41.5
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc-cCCCcccccccceeec
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH-SNARQCEVCKHAFSFS 125 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~-s~~~~CelCk~~f~~~ 125 (925)
++.++...|.||++... +|...||. |.+|..|+.+|++. +++..||+|+.++...
T Consensus 15 ~~~~~~~~C~IC~~~~~--~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQ--KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCCCCBCTTTCSBCS--SEEECTTC-----CEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred HhCccCCEeccCCcccC--CeEEcCCC-----ChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 34456789999997543 45555653 77999999999974 3567999999988653
No 18
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.56 E-value=2.8e-05 Score=66.36 Aligned_cols=52 Identities=17% Similarity=0.408 Sum_probs=39.8
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
.++...|.||++.. .++...||. |.+|..|+.+|+..+ ..||+|+.++....
T Consensus 12 ~~~~~~C~IC~~~~--~~~~~~~Cg-----H~fC~~Ci~~~~~~~--~~CP~Cr~~~~~~~ 63 (71)
T 2d8t_A 12 SLTVPECAICLQTC--VHPVSLPCK-----HVFCYLCVKGASWLG--KRCALCRQEIPEDF 63 (71)
T ss_dssp SSSCCBCSSSSSBC--SSEEEETTT-----EEEEHHHHHHCTTCS--SBCSSSCCBCCHHH
T ss_pred CCCCCCCccCCccc--CCCEEccCC-----CHHHHHHHHHHHHCC--CcCcCcCchhCHhh
Confidence 34567899999754 345656654 789999999999654 79999999987543
No 19
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.54 E-value=3.8e-05 Score=64.51 Aligned_cols=55 Identities=20% Similarity=0.452 Sum_probs=40.3
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeeccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPV 127 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~i 127 (925)
..+++..|.||++... +|...||. |.+|..|+.+|++ +++..||+|+.++....+
T Consensus 11 ~~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~~~i 65 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLC--SPKQTECG-----HRFCESCMAALLS-SSSPKCTACQESIVKDKV 65 (66)
T ss_dssp SCCCCEECTTTCCEES--SCCCCSSS-----CCCCHHHHHHHHT-TSSCCCTTTCCCCCTTTC
T ss_pred cCCcCCCCCCCChHhc--CeeECCCC-----CHHHHHHHHHHHH-hCcCCCCCCCcCCChhhc
Confidence 3355688999986543 45555554 6799999999997 445689999998865433
No 20
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.53 E-value=3.9e-05 Score=71.25 Aligned_cols=52 Identities=29% Similarity=0.514 Sum_probs=37.2
Q ss_pred CCcceEeCCCCCCC------------CC--c--ccccCCCCCcceecHHHHHHHHHc---cCCCcccccccceeec
Q 002420 69 EEVCRICRNPGDPE------------NP--L--RYPCACSGSIKFVHQDCLLQWLNH---SNARQCEVCKHAFSFS 125 (925)
Q Consensus 69 ~~~CrIC~~~~~~~------------~~--l--~~PC~C~Gs~~~vH~~CL~~Wl~~---s~~~~CelCk~~f~~~ 125 (925)
++.|.||++..... ++ . ..|| .|.+|.+||.+|+.. +++..||+|+..|...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C-----~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKC-----SHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSS-----CCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCC-----CCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 46899999764321 11 1 2344 388999999999975 3467999999999754
No 21
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.43 E-value=0.0001 Score=64.89 Aligned_cols=58 Identities=19% Similarity=0.555 Sum_probs=46.7
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecccc
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVY 128 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~iy 128 (925)
+++..|.||++.-+.+++.+.||.|. |.+++.|+.++.+. +...||+|+..|...++.
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CG---H~fC~~Cl~~~~~~-~~~~CP~CR~~~~~~~~~ 66 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCG---YQICRFCWHRIRTD-ENGLCPACRKPYPEDPAV 66 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTS---CCCCHHHHHHHTTS-SCSBCTTTCCBCSSCSSC
T ss_pred ccCCcCCccCccCccccccccccCCC---CCcCHHHHHHHHhc-CCCCCCCCCCccCCCchh
Confidence 45678999998765556778899885 77999999999764 467999999999876654
No 22
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.39 E-value=3.8e-05 Score=65.08 Aligned_cols=49 Identities=31% Similarity=0.713 Sum_probs=38.5
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
.++...|.||++.... ...||. |.+|..|+.+|++ ++..||+|++++.-
T Consensus 12 ~~~~~~C~IC~~~~~~---~~~~Cg-----H~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD---LILPCA-----HSFCQKCIDKWSD--RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCCCSSSCCSCCS---EEETTT-----EEECHHHHHHSSC--CCSSCHHHHHCTTC
T ss_pred CCCCCCCeeCCcCccC---cccCCC-----CcccHHHHHHHHH--CcCcCCCcCCcccC
Confidence 3456889999976543 556764 7799999999997 56799999998753
No 23
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.37 E-value=6.9e-05 Score=82.51 Aligned_cols=60 Identities=28% Similarity=0.519 Sum_probs=44.4
Q ss_pred ccccCCCcceEeCCCCCCCCCc-ccccCCCCCcceecHHHHHHHHHccCC---------Cccccccccee
Q 002420 64 EEEEEEEVCRICRNPGDPENPL-RYPCACSGSIKFVHQDCLLQWLNHSNA---------RQCEVCKHAFS 123 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l-~~PC~C~Gs~~~vH~~CL~~Wl~~s~~---------~~CelCk~~f~ 123 (925)
+++++...|.||++...+++.+ ...|.-..|.+.+|+.||.+|+++..+ ..||.|+++..
T Consensus 303 e~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 303 EEDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp TCCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred ccccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 3456788999999876543444 245765566788999999999986432 58999999765
No 24
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=97.35 E-value=3.2e-05 Score=73.31 Aligned_cols=53 Identities=23% Similarity=0.439 Sum_probs=0.9
Q ss_pred CCCcceEeCCCCCCC--------------CCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 68 EEEVCRICRNPGDPE--------------NPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~--------------~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+.+.|-||+++.+.. +-.+....| .|.+|..|+.+|++. +..||+|+.+|.+.
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C---~H~FH~~CI~~Wl~~--~~~CP~Cr~~~~~~ 113 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVC---NHAFHFHCISRWLKT--RQVCPLDNREWEFQ 113 (117)
T ss_dssp CC----------------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCc---CceEcHHHHHHHHHc--CCcCCCCCCeeeee
Confidence 347899999764321 111111233 388999999999976 46899999998764
No 25
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.34 E-value=0.00014 Score=62.08 Aligned_cols=53 Identities=15% Similarity=0.375 Sum_probs=39.4
Q ss_pred cccCCCcceEeCCCCCCCCCcc-cccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 65 EEEEEEVCRICRNPGDPENPLR-YPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~-~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
+.++...|.||++... +|.. .||. |.+|..|+.+|++. +..||+|+.++....
T Consensus 11 ~~~~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 11 ELTPYILCSICKGYLI--DATTITECL-----HTFCKSCIVRHFYY--SNRCPKCNIVVHQTQ 64 (72)
T ss_dssp CCCGGGSCTTTSSCCS--SCEECSSSC-----CEECHHHHHHHHHH--CSSCTTTCCCCCSSC
T ss_pred hcCCCCCCCCCChHHH--CcCEECCCC-----CHHHHHHHHHHHHc--CCcCCCcCcccCccc
Confidence 3455688999987543 3443 2554 77999999999976 479999999987643
No 26
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.33 E-value=0.00024 Score=61.71 Aligned_cols=53 Identities=23% Similarity=0.551 Sum_probs=41.1
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHcc----CCCcccccccceeec
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHS----NARQCEVCKHAFSFS 125 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s----~~~~CelCk~~f~~~ 125 (925)
.++...|.||++... +|...||. |.+|..|+.+|++.+ +...||+|+.++...
T Consensus 16 ~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecw_A 16 IKEEVTCPICLELLK--EPVSADCN-----HSFCRACITLNYESNRNTDGKGNCPVCRVPYPFG 72 (85)
T ss_dssp CCTTTSCTTTCSCCS--SCEECTTS-----CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTT
T ss_pred CccCCCCcCCChhhC--cceeCCCC-----CHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHH
Confidence 345678999997643 45666654 679999999999875 378999999998753
No 27
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=97.27 E-value=0.00014 Score=64.88 Aligned_cols=54 Identities=22% Similarity=0.545 Sum_probs=42.1
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
++.+++-.|.||++... +|...|| | .|.++..|+.+|+..+++..||+|+.++.
T Consensus 8 ~~~~~~~~C~IC~~~~~--~p~~~~~-C---gH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 8 DPIPDELLCLICKDIMT--DAVVIPC-C---GNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CCCCTTTEETTTTEECS--SCEECTT-T---CCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred ccCCcCCCCCCCChhhc--CceECCC-C---CCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 34456789999996543 5666662 2 37799999999999887789999999874
No 28
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.26 E-value=0.0003 Score=58.33 Aligned_cols=48 Identities=25% Similarity=0.544 Sum_probs=36.4
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHcc-CCCccccc
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHS-NARQCEVC 118 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s-~~~~CelC 118 (925)
++.+++..|.||++... +|...||. |.+|..|+.+|++.+ ++.+||+|
T Consensus 15 ~~~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 15 NKLQEEVICPICLDILQ--KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCCCBCTTTCSBCS--SCEECTTS-----SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred HhCccCCCCCcCCchhC--CeEEeCCC-----CcchHHHHHHHHHcCCCCCcCcCC
Confidence 34456789999997543 46666654 779999999999853 56799998
No 29
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.22 E-value=0.0004 Score=60.33 Aligned_cols=54 Identities=26% Similarity=0.529 Sum_probs=41.4
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc----cCCCcccccccceeec
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH----SNARQCEVCKHAFSFS 125 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~----s~~~~CelCk~~f~~~ 125 (925)
+.++...|.||++... +|...||. |.+|..|+.+|++. .+...||+|+.++...
T Consensus 15 ~~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecv_A 15 NVKEEVTCPICLELLT--QPLSLDCG-----HSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 72 (85)
T ss_dssp CCCCCCCCTTTCSCCS--SCBCCSSS-----CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSS
T ss_pred HccCCCCCCCCCcccC--CceeCCCC-----CHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHH
Confidence 3445688999997653 45555654 66999999999987 3478999999998753
No 30
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=97.18 E-value=0.0002 Score=60.23 Aligned_cols=49 Identities=22% Similarity=0.629 Sum_probs=37.3
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCccccccccee
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
+++..|.||++.... .....||. |.+|.+|+.+|++.+ ..||+|+.++.
T Consensus 3 ~~~~~C~IC~~~~~~-~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~ 51 (68)
T 1chc_A 3 TVAERCPICLEDPSN-YSMALPCL-----HAFCYVCITRWIRQN--PTCPLCKVPVE 51 (68)
T ss_dssp CCCCCCSSCCSCCCS-CEEETTTT-----EEESTTHHHHHHHHS--CSTTTTCCCCC
T ss_pred CCCCCCeeCCccccC-CcEecCCC-----CeeHHHHHHHHHhCc--CcCcCCChhhH
Confidence 456789999976432 12456654 779999999999755 69999999875
No 31
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.00027 Score=57.27 Aligned_cols=47 Identities=21% Similarity=0.613 Sum_probs=35.5
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc-cCCCccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH-SNARQCEVC 118 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~-s~~~~CelC 118 (925)
+.++...|.||++... +|...||. |.+|.+|+.+|++. +++..||+|
T Consensus 11 ~~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLK--EPVIIECG-----HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CSCCCCBCSSSCCBCS--SCCCCSSC-----CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccccCCCCccCCcccC--ccEeCCCC-----CccCHHHHHHHHHhcCCCCCCCCC
Confidence 3456689999997653 35556654 66999999999875 457899998
No 32
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=97.06 E-value=0.00016 Score=61.06 Aligned_cols=51 Identities=18% Similarity=0.469 Sum_probs=37.5
Q ss_pred cCCCcceEeCCCCCC----CC-CcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 67 EEEEVCRICRNPGDP----EN-PLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~----~~-~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+++..|.||++.... ++ ....||. |.+|.+|+.+|++.+ ..||+|+.++..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCC-----ChHhHHHHHHHHHcC--CCCCCCCCccCh
Confidence 456889999975321 11 1345554 779999999999765 599999998864
No 33
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=96.98 E-value=0.0002 Score=61.78 Aligned_cols=54 Identities=26% Similarity=0.574 Sum_probs=41.2
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHcc-----CCCcccccccceeec
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHS-----NARQCEVCKHAFSFS 125 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s-----~~~~CelCk~~f~~~ 125 (925)
+.+++..|.||++... +|...||. |.+|.+|+.+|++.+ +...||+|+.++...
T Consensus 8 ~~~~~~~C~IC~~~~~--~p~~l~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~ 66 (79)
T 2egp_A 8 NVQEEVTCPICLELLT--EPLSLDCG-----HSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 (79)
T ss_dssp CCCCCCEETTTTEECS--SCCCCSSS-----CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSS
T ss_pred hcccCCCCcCCCcccC--CeeECCCC-----CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHh
Confidence 3346688999997643 45555654 679999999999873 368999999998754
No 34
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=96.91 E-value=0.00021 Score=58.97 Aligned_cols=50 Identities=20% Similarity=0.464 Sum_probs=36.6
Q ss_pred CCCcceEeCCCCCC-----CCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 68 EEEVCRICRNPGDP-----ENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 68 ~~~~CrIC~~~~~~-----~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
++..|.||++.... ..+...||. |.+|.+|+.+|++. +..||+|+.++..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCC-----CchhHHHHHHHHHc--CCCCCCCCccCCc
Confidence 45789999975421 112345554 77999999999986 4699999998864
No 35
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=96.70 E-value=0.00086 Score=57.86 Aligned_cols=52 Identities=13% Similarity=0.296 Sum_probs=39.9
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
..++-.|.||++.. .+|...||. |.+++.|+.+|++. ++.+||+|+.++...
T Consensus 5 ~~~~~~C~IC~~~~--~~Pv~~~Cg-----H~fc~~Ci~~~~~~-~~~~CP~C~~~~~~~ 56 (78)
T 1t1h_A 5 FPEYFRCPISLELM--KDPVIVSTG-----QTYERSSIQKWLDA-GHKTCPKSQETLLHA 56 (78)
T ss_dssp CSSSSSCTTTSCCC--SSEEEETTT-----EEEEHHHHHHHHTT-TCCBCTTTCCBCSSC
T ss_pred CcccCCCCCccccc--cCCEEcCCC-----CeecHHHHHHHHHH-CcCCCCCCcCCCChh
Confidence 34578999998754 346666654 77999999999974 467999999988653
No 36
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=96.67 E-value=0.00053 Score=62.58 Aligned_cols=55 Identities=22% Similarity=0.493 Sum_probs=40.5
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
.-+++..|.||++... +|.. |..+.|.+|..|+.+|++.++ ..||+|+.++....
T Consensus 18 ~l~~~~~C~IC~~~~~--~p~~----~~~CgH~FC~~Ci~~~~~~~~-~~CP~Cr~~~~~~~ 72 (100)
T 3lrq_A 18 SIAEVFRCFICMEKLR--DARL----CPHCSKLCCFSCIRRWLTEQR-AQCPHCRAPLQLRE 72 (100)
T ss_dssp HHHHHTBCTTTCSBCS--SEEE----CTTTCCEEEHHHHHHHHHHTC-SBCTTTCCBCCGGG
T ss_pred cCCCCCCCccCCcccc--Cccc----cCCCCChhhHHHHHHHHHHCc-CCCCCCCCcCCHHH
Confidence 3445688999997543 3443 334458899999999998764 69999999986543
No 37
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=96.67 E-value=0.00068 Score=67.15 Aligned_cols=52 Identities=19% Similarity=0.489 Sum_probs=37.3
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+++..|.||++... +|... ..+.|.+|..|+.+|+.. ++..||+|+..+.-.
T Consensus 52 ~~~~~C~IC~~~~~--~p~~~----~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~~ 103 (165)
T 2ckl_B 52 HSELMCPICLDMLK--NTMTT----KECLHRFCADCIITALRS-GNKECPTCRKKLVSK 103 (165)
T ss_dssp HHHHBCTTTSSBCS--SEEEE----TTTCCEEEHHHHHHHHHT-TCCBCTTTCCBCCSG
T ss_pred CCCCCCcccChHhh--CcCEe----CCCCChhHHHHHHHHHHh-CcCCCCCCCCcCCCc
Confidence 34568999987543 34332 223488999999999985 357899999988543
No 38
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=96.57 E-value=0.00065 Score=64.09 Aligned_cols=50 Identities=24% Similarity=0.469 Sum_probs=38.9
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+++..|.||++... +|...||. |.+|..|+.+|+. .+...||+|+..+..
T Consensus 50 ~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 50 EETFQCICCQELVF--RPITTVCQ-----HNVCKDCLDRSFR-AQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHTBCTTTSSBCS--SEEECTTS-----CEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred ccCCCCCcCChHHc--CcEEeeCC-----CcccHHHHHHHHh-HCcCCCCCCCccCCC
Confidence 45578999997543 46666664 7799999999998 345699999999865
No 39
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=96.37 E-value=0.00066 Score=65.45 Aligned_cols=48 Identities=21% Similarity=0.567 Sum_probs=37.0
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
++..|.||++.. .+|...||. |.+|..|+.+|+.. +..||+|+.++.-
T Consensus 52 ~~~~C~iC~~~~--~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 52 NELQCIICSEYF--IEAVTLNCA-----HSFCSYCINEWMKR--KIECPICRKDIKS 99 (138)
T ss_dssp HHSBCTTTCSBC--SSEEEETTS-----CEEEHHHHHHHTTT--CSBCTTTCCBCCC
T ss_pred ccCCCcccCccc--CCceECCCC-----CCccHHHHHHHHHc--CCcCCCCCCcCCC
Confidence 446799999754 346666653 78999999999965 4689999998753
No 40
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=96.35 E-value=0.0014 Score=64.35 Aligned_cols=52 Identities=23% Similarity=0.515 Sum_probs=39.9
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
++...|.||++.. .+|...||. |.++..|+.+|+.. +...||+|+..+...+
T Consensus 76 ~~~~~C~IC~~~~--~~pv~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~~~ 127 (150)
T 1z6u_A 76 EQSFMCVCCQELV--YQPVTTECF-----HNVCKDCLQRSFKA-QVFSCPACRHDLGQNY 127 (150)
T ss_dssp HHHTBCTTTSSBC--SSEEECTTS-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCTTC
T ss_pred ccCCEeecCChhh--cCCEEcCCC-----CchhHHHHHHHHHh-CCCcCCCCCccCCCCC
Confidence 3457899998754 346666664 67999999999985 4458999999987653
No 41
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.34 E-value=0.0012 Score=55.01 Aligned_cols=51 Identities=16% Similarity=0.423 Sum_probs=36.1
Q ss_pred CCCcceEeCC-CCC-CCCC-cccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 68 EEEVCRICRN-PGD-PENP-LRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 68 ~~~~CrIC~~-~~~-~~~~-l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
++..|.||++ ... +..+ ...||. |.+|++|+.+|+.. ++..||+|+.++..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCG-----HTLCESCVDLLFVR-GAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTC-----CCEEHHHHHHHHHT-TSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCC-----CHhHHHHHHHHHHc-CCCcCCCCCCcccc
Confidence 3578999987 322 1111 335654 66999999999874 45789999998864
No 42
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.14 E-value=0.0016 Score=59.78 Aligned_cols=51 Identities=25% Similarity=0.576 Sum_probs=39.1
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHcc-CCCcccccccceeec
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHS-NARQCEVCKHAFSFS 125 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s-~~~~CelCk~~f~~~ 125 (925)
+...|.||++.. .+|...||. |.+|..|+.+|++.+ +...||+|+..+...
T Consensus 20 ~~~~C~IC~~~~--~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 71 (112)
T 1jm7_A 20 KILECPICLELI--KEPVSTKCD-----HIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71 (112)
T ss_dssp HHTSCSSSCCCC--SSCCBCTTS-----CCCCSHHHHHHHHSSSSSCCCTTTSCCCCTT
T ss_pred CCCCCcccChhh--cCeEECCCC-----CHHHHHHHHHHHHhCCCCCCCcCCCCcCCHh
Confidence 457899999754 346656654 779999999999865 356899999987653
No 43
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.14 E-value=0.0023 Score=71.96 Aligned_cols=52 Identities=19% Similarity=0.608 Sum_probs=40.3
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeeccc
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPV 127 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~i 127 (925)
....|.||++.. .++...||. |.+|..|+.+|++. +...||+|+.++.....
T Consensus 331 ~~~~C~ICle~~--~~pv~lpCG-----H~FC~~Ci~~wl~~-~~~~CP~CR~~i~~~~~ 382 (389)
T 2y1n_A 331 TFQLCKICAEND--KDVKIEPCG-----HLMCTSCLTSWQES-EGQGCPFCRCEIKGTEP 382 (389)
T ss_dssp SSSBCTTTSSSB--CCEEEETTC-----CEECHHHHHHHHHH-TCSBCTTTCCBCCEEEE
T ss_pred CCCCCCccCcCC--CCeEEeCCC-----ChhhHHHHHHHHhc-CCCCCCCCCCccCCcee
Confidence 347999998654 456777876 56899999999974 45799999999876543
No 44
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=96.12 E-value=0.0014 Score=59.35 Aligned_cols=49 Identities=18% Similarity=0.371 Sum_probs=37.1
Q ss_pred cCCCcceEeCCCCCCCCCccc-ccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 67 EEEEVCRICRNPGDPENPLRY-PCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~-PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+++..|.||++... +|... ||. |.+|..|+.+|++. +..||+|+..+..
T Consensus 20 ~~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 20 DDLLRCGICFEYFN--IAMIIPQCS-----HNYCSLCIRKFLSY--KTQCPTCCVTVTE 69 (99)
T ss_dssp HHHTBCTTTCSBCS--SEEECTTTC-----CEEEHHHHHHHHTT--CCBCTTTCCBCCG
T ss_pred CCCCCcccCChhhC--CcCEECCCC-----CHhhHHHHHHHHHC--CCCCCCCCCcCCh
Confidence 45678999987543 34433 553 77999999999974 4699999998864
No 45
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=96.04 E-value=0.0028 Score=59.32 Aligned_cols=52 Identities=17% Similarity=0.396 Sum_probs=39.1
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
++.-.|.||++... +|...|| .|.++..|+.+|++.++. .||+|+.++....
T Consensus 16 ~~~~~C~IC~~~~~--~p~~~~C-----gH~fC~~Ci~~~~~~~~~-~CP~Cr~~~~~~~ 67 (118)
T 3hct_A 16 ESKYECPICLMALR--EAVQTPC-----GHRFCKACIIKSIRDAGH-KCPVDNEILLENQ 67 (118)
T ss_dssp CGGGBCTTTCSBCS--SEEECTT-----SCEEEHHHHHHHHHHHCS-BCTTTCCBCCGGG
T ss_pred CCCCCCCcCChhhc--CeEECCc-----CChhhHHHHHHHHhhCCC-CCCCCCCCcCHHh
Confidence 45578999996543 4555554 377999999999987643 9999999886543
No 46
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=95.87 E-value=0.0026 Score=58.45 Aligned_cols=51 Identities=18% Similarity=0.456 Sum_probs=38.6
Q ss_pred cccCCCcceEeCCCCCCCCCccc-ccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 65 EEEEEEVCRICRNPGDPENPLRY-PCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~-PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+-+++..|.||++... +|... ||. |.+|..|+.+|++.+ ..||+|+..+..
T Consensus 11 ~~~~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~~--~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 11 ELNPHLMCVLCGGYFI--DATTIIECL-----HSFCKTCIVRYLETS--KYCPICDVQVHK 62 (108)
T ss_dssp HHGGGTBCTTTSSBCS--SEEEETTTC-----CEEEHHHHHHHHTSC--SBCTTTCCBSCS
T ss_pred ccCCcCCCccCChHHh--CcCEeCCCC-----ChhhHHHHHHHHHhC--CcCcCCCccccc
Confidence 3345688999987543 35543 554 779999999999764 799999998764
No 47
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=95.79 E-value=0.003 Score=58.75 Aligned_cols=51 Identities=20% Similarity=0.490 Sum_probs=39.1
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+++..|.||++.. .+|...||. |.+|..|+.+|++.+ +..||+|+.++...
T Consensus 21 ~~~~~C~IC~~~~--~~p~~~~Cg-----H~fC~~Ci~~~~~~~-~~~CP~Cr~~~~~~ 71 (116)
T 1rmd_A 21 VKSISCQICEHIL--ADPVETSCK-----HLFCRICILRCLKVM-GSYCPSCRYPCFPT 71 (116)
T ss_dssp HHHTBCTTTCSBC--SSEEECTTS-----CEEEHHHHHHHHHHT-CSBCTTTCCBCCGG
T ss_pred cCCCCCCCCCcHh--cCcEEcCCC-----CcccHHHHHHHHhHC-cCcCCCCCCCCCHh
Confidence 3457899998754 346655653 779999999999864 45899999988654
No 48
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=95.56 E-value=0.0014 Score=60.82 Aligned_cols=49 Identities=22% Similarity=0.518 Sum_probs=38.0
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
++..|.||++... +|...||. |.+|..|+.+|++. ++..||+|+..+..
T Consensus 14 ~~~~C~iC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILV--EPVTLPCN-----HTLCKPCFQSTVEK-ASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCS--SCEECTTS-----CEECHHHHCCCCCT-TTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccC--ceeEcCCC-----CHHhHHHHHHHHhH-CcCCCCCCCcccCc
Confidence 4578999997543 46666764 77999999999964 35799999998864
No 49
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=95.44 E-value=0.0027 Score=59.53 Aligned_cols=53 Identities=17% Similarity=0.433 Sum_probs=38.5
Q ss_pred cCCCcceEeCCCCCC-----CCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeecc
Q 002420 67 EEEEVCRICRNPGDP-----ENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~-----~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~ 126 (925)
+++..|.||++..+. ..+...||. |.+|.+|+.+|++.+ ..||+|+..+....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINHKR 62 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTC-----CEEEHHHHHHHHTTC--SBCTTTCCBCTTTC
T ss_pred CCCCCCcccChhhhCccccccCeEecCCC-----ChhhHHHHHHHHHhC--CCCCCCCCcCcccc
Confidence 356789999975421 112445654 779999999999754 59999999987643
No 50
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=95.20 E-value=0.0044 Score=50.50 Aligned_cols=49 Identities=24% Similarity=0.564 Sum_probs=36.4
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+++++..|.||++... +|...||. |.++..|+.+| +..||+|++++...
T Consensus 2 ee~~~~~C~IC~~~~~--~p~~l~Cg-----H~fC~~Ci~~~-----~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 2 EEFQFLRCQQCQAEAK--CPKLLPCL-----HTLCSGCLEAS-----GMQCPICQAPWPLG 50 (56)
T ss_dssp CSCCCSSCSSSCSSCB--CCSCSTTS-----CCSBTTTCSSS-----SSSCSSCCSSSSCC
T ss_pred CcccCCCceEeCCccC--CeEEcCCC-----CcccHHHHccC-----CCCCCcCCcEeecC
Confidence 3456678999987653 46667765 55899998773 56899999988753
No 51
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.14 E-value=0.013 Score=49.88 Aligned_cols=54 Identities=26% Similarity=0.543 Sum_probs=37.5
Q ss_pred cccccCCCcceEeCCCCCCCCCcccccCCCCCcce-ecHHHHHHHHHccCCCcccccccceeec-cccc
Q 002420 63 EEEEEEEEVCRICRNPGDPENPLRYPCACSGSIKF-VHQDCLLQWLNHSNARQCEVCKHAFSFS-PVYA 129 (925)
Q Consensus 63 ~~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~-vH~~CL~~Wl~~s~~~~CelCk~~f~~~-~iy~ 129 (925)
|..+++...|.||++.. .++...||. |. +-..|+.+ ...||+|+..+.-. ++|.
T Consensus 9 e~~~~~~~~C~IC~~~~--~~~v~~pCg-----H~~~C~~C~~~------~~~CP~CR~~i~~~~~i~~ 64 (68)
T 2ea5_A 9 EPSEENSKDCVVCQNGT--VNWVLLPCR-----HTCLCDGCVKY------FQQCPMCRQFVQESFALSG 64 (68)
T ss_dssp CCSCCCSSCCSSSSSSC--CCCEETTTT-----BCCSCTTHHHH------CSSCTTTCCCCCCEECCCS
T ss_pred cccCCCCCCCCCcCcCC--CCEEEECCC-----ChhhhHHHHhc------CCCCCCCCcchhceEEeec
Confidence 34556678999999753 457778986 33 56688873 36999999987543 4454
No 52
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=94.94 E-value=0.0078 Score=50.37 Aligned_cols=50 Identities=12% Similarity=0.296 Sum_probs=36.2
Q ss_pred cccCCCcceEeCCCCCCCCCcc--cccCCCCCcce-ecHHHHHHHHHccCCCccccccccee
Q 002420 65 EEEEEEVCRICRNPGDPENPLR--YPCACSGSIKF-VHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~--~PC~C~Gs~~~-vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
..+....|.||++... ++.+ .||. |. +-.+|..+|.+.+ ..||+|+.++.
T Consensus 3 ~~~~~~~C~IC~~~~~--~~~~~~~pCg-----H~~~C~~C~~~~~~~~--~~CPiCR~~i~ 55 (63)
T 2vje_B 3 CQNLLKPCSLCEKRPR--DGNIIHGRTG-----HLVTCFHCARRLKKAG--ASCPICKKEIQ 55 (63)
T ss_dssp CGGGGSBCTTTSSSBS--CEEEEETTEE-----EEEECHHHHHHHHHTT--CBCTTTCCBCC
T ss_pred CCCcCCCCcccCCcCC--CeEEEecCCC-----CHhHHHHHHHHHHHhC--CcCCCcCchhh
Confidence 4455688999997532 3333 3875 54 6789999998654 68999999874
No 53
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=94.80 E-value=0.0042 Score=58.18 Aligned_cols=54 Identities=19% Similarity=0.442 Sum_probs=37.1
Q ss_pred cCCCcceEeCCCCCC---CCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDP---ENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~---~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
++...|.||++..+. .+....-+.| .|.+|..|+.+|++.+ .+||+|+..+.-.
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~C---gH~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTEC---GHVFCSQCLRDSLKNA--NTCPTCRKKINHK 126 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETT---SBEEEHHHHHHHHHHC--SBCTTTCCBCCGG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCC---CChhhHHHHHHHHHcC--CCCCCCCCcCChh
Confidence 456789999975321 1112122333 3889999999999765 5999999988643
No 54
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=94.53 E-value=0.0024 Score=55.04 Aligned_cols=47 Identities=23% Similarity=0.650 Sum_probs=36.5
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcce-ecHHHHHHHHHccCCCcccccccceee
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKF-VHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~-vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+.+++..|.||++.. .++...||. |. +...|+.+| ..||+|+..+.-
T Consensus 20 ~~~~~~~C~iC~~~~--~~~~~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 20 RLQEEKLCKICMDRN--IAIVFVPCG-----HLVTCKQCAEAV------DKCPMCYTVITF 67 (74)
T ss_dssp HHHHHTBCTTTSSSB--CCEEEETTC-----CBCCCHHHHTTC------SBCTTTCCBCSE
T ss_pred cCccCCCCCCCCCCC--CCEEEcCCC-----ChhHHHHhhhcC------ccCCCcCcCccC
Confidence 334567999999753 456777875 66 899999999 699999998764
No 55
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=94.53 E-value=0.021 Score=60.28 Aligned_cols=53 Identities=15% Similarity=0.454 Sum_probs=40.1
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+.-..|.||++--..+ .-|. .+...+|..|+.+|+++++...||.|++.+...
T Consensus 178 ~~i~~C~iC~~iv~~g----~~C~--~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 178 DAVKICNICHSLLIQG----QSCE--TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp TTCCBCTTTCSBCSSC----EECS--SSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCCCcCcchhhHHhCC----cccC--ccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 3578999999765532 1242 244679999999999988888999999987653
No 56
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=94.05 E-value=0.035 Score=50.65 Aligned_cols=51 Identities=12% Similarity=0.109 Sum_probs=39.2
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
.++-.|.||++-- .+|.+.||. .|-+-+.|+.+|+.. ..+||+|+.++...
T Consensus 20 p~~~~CpI~~~~m--~dPV~~~cG----~htf~r~cI~~~l~~--~~~cP~~~~~l~~~ 70 (98)
T 1wgm_A 20 CDEFLDPIMSTLM--CDPVVLPSS----RVTVDRSTIARHLLS--DQTDPFNRSPLTMD 70 (98)
T ss_dssp CTTTBCTTTCSBC--SSEEECTTT----CCEEEHHHHHHHTTT--SCBCTTTCSBCCTT
T ss_pred cHhcCCcCccccc--cCCeECCCC----CeEECHHHHHHHHHh--CCCCCCCCCCCChh
Confidence 4568999998654 457777765 255889999999975 46999999988653
No 57
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=94.02 E-value=0.036 Score=49.03 Aligned_cols=51 Identities=14% Similarity=0.192 Sum_probs=39.7
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
..++-.|.||++-- .+|...||. |.+-+.|+.+|+.. ..+||+|+.++...
T Consensus 11 ~p~~~~CpI~~~~m--~dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~~ 61 (85)
T 2kr4_A 11 APDEFRDPLMDTLM--TDPVRLPSG-----TVMDRSIILRHLLN--SPTDPFNRQMLTES 61 (85)
T ss_dssp CCTTTBCTTTCSBC--SSEEECTTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCCGG
T ss_pred CchheECcccCchh--cCCeECCCC-----CEECHHHHHHHHhc--CCCCCCCcCCCChH
Confidence 34678999998654 357877763 56899999999984 46999999988653
No 58
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=94.01 E-value=0.038 Score=50.60 Aligned_cols=51 Identities=12% Similarity=0.210 Sum_probs=39.7
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+..++-.|.||++-- .+|...||. |.+-+.|+.+|+.. ..+||+|+.++..
T Consensus 25 ~~p~~~~CpI~~~~m--~dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~ 75 (100)
T 2kre_A 25 DAPDEFRDPLMDTLM--TDPVRLPSG-----TIMDRSIILRHLLN--SPTDPFNRQTLTE 75 (100)
T ss_dssp SCSTTTBCTTTCSBC--SSEEEETTT-----EEEEHHHHHHHTTS--CSBCSSSCCBCCT
T ss_pred cCcHhhCCcCccCcc--cCCeECCCC-----CEEchHHHHHHHHc--CCCCCCCCCCCCh
Confidence 334578999998654 468887863 56899999999973 5799999998864
No 59
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.58 E-value=0.032 Score=58.73 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=39.3
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
.+.-.|.||++.- .+|.+.||. |-+-+.|+.+|+.+++. +||+|+.++...
T Consensus 206 ~~~~~c~i~~~~~--~dPv~~~~g-----h~f~~~~i~~~~~~~~~-~cP~~~~~~~~~ 256 (281)
T 2c2l_A 206 PDYLCGKISFELM--REPCITPSG-----ITYDRKDIEEHLQRVGH-FNPVTRSPLTQE 256 (281)
T ss_dssp CSTTBCTTTCSBC--SSEEECSSC-----CEEETTHHHHHHHHTCS-SCTTTCCCCCGG
T ss_pred CcccCCcCcCCHh--cCCeECCCC-----CEECHHHHHHHHHHCCC-CCcCCCCCCchh
Confidence 3567899998654 468888864 55889999999987543 499999988643
No 60
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=93.55 E-value=0.012 Score=54.95 Aligned_cols=48 Identities=21% Similarity=0.452 Sum_probs=37.3
Q ss_pred ccCCCcceEeCCCCCCCCCccc-ccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 66 EEEEEVCRICRNPGDPENPLRY-PCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~-PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
-+++-.|.||++.. .+|... ||. |.++..|+.+|++ ..||+|+..+..
T Consensus 19 l~~~~~C~IC~~~~--~~pv~~~~Cg-----H~fC~~Ci~~~~~----~~CP~Cr~~~~~ 67 (117)
T 1jm7_B 19 LEKLLRCSRCTNIL--REPVCLGGCE-----HIFCSNCVSDCIG----TGCPVCYTPAWI 67 (117)
T ss_dssp HHHTTSCSSSCSCC--SSCBCCCSSS-----CCBCTTTGGGGTT----TBCSSSCCBCSC
T ss_pred chhCCCCCCCChHh--hCccEeCCCC-----CHHHHHHHHHHhc----CCCcCCCCcCcc
Confidence 35678999998754 346655 654 7799999999997 689999998753
No 61
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=93.41 E-value=0.021 Score=55.47 Aligned_cols=52 Identities=25% Similarity=0.542 Sum_probs=37.9
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
..+++-.|.||++.- .+|...||. |.+++.|+.+|++. +...||+|+.+..+
T Consensus 27 ~l~~~~~C~IC~~~~--~~pv~~~Cg-----H~FC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 27 KLEAKYLCSACRNVL--RRPFQAQCG-----HRYCSFCLASILSS-GPQNCAACVHEGIY 78 (141)
T ss_dssp GCCGGGBCTTTCSBC--SSEEECTTS-----CEEEHHHHHHHGGG-SCEECHHHHHTTCC
T ss_pred cCCcCcCCCCCChhh--cCcEECCCC-----CccCHHHHHHHHhc-CCCCCCCCCCcccc
Confidence 445667899998654 245554443 77999999999964 34689999997644
No 62
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=92.86 E-value=0.047 Score=54.02 Aligned_cols=53 Identities=17% Similarity=0.378 Sum_probs=38.9
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
.-++.-.|.||++... +|...|| .|.+...|+.+|++.++ ..||+|+..+...
T Consensus 14 ~~~~~~~C~IC~~~~~--~pv~~~C-----gH~fC~~Ci~~~~~~~~-~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 14 PLESKYECPICLMALR--EAVQTPC-----GHRFCKACIIKSIRDAG-HKCPVDNEILLEN 66 (170)
T ss_dssp CCCGGGBCTTTCSBCS--SEEECTT-----SCEEEHHHHHHHHHHHC-SBCTTTCCBCCGG
T ss_pred CCCCCCCCCCCChhhc--CcEECCC-----CCHHHHHHHHHHHHhCC-CCCCCCccCcchh
Confidence 3345678999987543 4555443 37799999999998654 4999999987653
No 63
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.69 E-value=0.023 Score=48.87 Aligned_cols=45 Identities=24% Similarity=0.716 Sum_probs=33.8
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcce-ecHHHHHHHHHccCCCcccccccceee
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKF-VHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~-vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
+++..|.||++.. .++...||. |. +...|+.+ ...||+|+.++.-
T Consensus 23 ~~~~~C~IC~~~~--~~~~~~pCg-----H~~~C~~C~~~------~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 23 QEEKLCKICMDRN--IAIVFVPCG-----HLVTCKQCAEA------VDKCPMCYTVITF 68 (75)
T ss_dssp HHHHSCSSSCSSC--CCBCCSSSC-----CCCBCHHHHHH------CSBCTTTCCBCCC
T ss_pred CCCCCCCcCCCCC--CCEEEecCC-----CHHHHHHHhhC------CCCCccCCceecC
Confidence 4457899999754 457777874 66 78999853 3699999998754
No 64
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=92.47 E-value=0.054 Score=45.31 Aligned_cols=47 Identities=19% Similarity=0.440 Sum_probs=34.2
Q ss_pred CCCcceEeCCCCCCCCCccc--ccCCCCCcce-ecHHHHHHHHHccCCCccccccccee
Q 002420 68 EEEVCRICRNPGDPENPLRY--PCACSGSIKF-VHQDCLLQWLNHSNARQCEVCKHAFS 123 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~--PC~C~Gs~~~-vH~~CL~~Wl~~s~~~~CelCk~~f~ 123 (925)
++..|.||++.. .++... ||. |. +=.+|..+|.+. +..||+|+.++.
T Consensus 7 ~~~~C~IC~~~~--~~~~~~~~pCg-----H~~~C~~C~~~~~~~--~~~CPiCR~~i~ 56 (64)
T 2vje_A 7 AIEPCVICQGRP--KNGCIVHGKTG-----HLMACFTCAKKLKKR--NKPCPVCRQPIQ 56 (64)
T ss_dssp GGSCCTTTSSSC--SCEEEEETTEE-----EEEECHHHHHHHHHT--TCCCTTTCCCCC
T ss_pred CcCCCCcCCCCC--CCEEEECCCCC-----ChhhHHHHHHHHHHc--CCcCCCcCcchh
Confidence 456899999753 344544 875 55 347999999974 358999999875
No 65
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=91.51 E-value=0.095 Score=56.02 Aligned_cols=55 Identities=20% Similarity=0.384 Sum_probs=41.3
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccc--cccceeec
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEV--CKHAFSFS 125 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~Cel--Ck~~f~~~ 125 (925)
....+-.|.||++. +..|+..+.|.|-+=+.|+.+|++.+++..||+ |++.+...
T Consensus 177 ~~~~el~CPIcl~~------f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~ 233 (267)
T 3htk_C 177 GGKIELTCPITCKP------YEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMR 233 (267)
T ss_dssp SSBCCSBCTTTSSB------CSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGG
T ss_pred CCceeeECcCccCc------ccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchh
Confidence 34556789999854 344554444457899999999998777789999 99988654
No 66
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=91.45 E-value=0.073 Score=53.92 Aligned_cols=51 Identities=10% Similarity=0.029 Sum_probs=39.6
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
.++-.|.||++-- .+|.+.||. +-+=+.|+.+|+..++. +||+|+.++...
T Consensus 104 p~~f~CPI~~elm--~DPV~~~~G-----htfer~~I~~~l~~~~~-tcP~t~~~l~~~ 154 (179)
T 2f42_A 104 PDYLCGKISFELM--REPCITPSG-----ITYDRKDIEEHLQRVGH-FDPVTRSPLTQD 154 (179)
T ss_dssp CGGGBCTTTCSBC--SSEEECTTS-----CEEEHHHHHHHHHHTCS-BCTTTCCBCCGG
T ss_pred cHhhcccCccccC--CCCeECCCC-----CEECHHHHHHHHHhCCC-CCCCCcCCCChh
Confidence 4567899998654 358888764 55889999999987544 799999988653
No 67
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.06 E-value=0.15 Score=45.78 Aligned_cols=48 Identities=17% Similarity=0.503 Sum_probs=36.6
Q ss_pred cCCCcceEeCCCCCCCCCcccc-cCCCCCcceecHHHHHHHHHcc----CCCcccc--cccc
Q 002420 67 EEEEVCRICRNPGDPENPLRYP-CACSGSIKFVHQDCLLQWLNHS----NARQCEV--CKHA 121 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~P-C~C~Gs~~~vH~~CL~~Wl~~s----~~~~Cel--Ck~~ 121 (925)
.++-.|.||++.. .+|...| |. |-+-+.|+.+|+... +..+||+ |++.
T Consensus 5 ~~~~~CPI~~~~~--~dPV~~~~cG-----h~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEM--KKPVKNKVCG-----HTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBC--SSEEEESSSC-----CEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchh--cCCEEcCCCC-----CeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 4568899998654 3577664 54 669999999999864 3579999 9877
No 68
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=88.51 E-value=0.18 Score=44.93 Aligned_cols=53 Identities=19% Similarity=0.342 Sum_probs=37.0
Q ss_pred CCCcceEeCCCCCCCCCcc-cccCCCCCcceecHHHHHHHHHcc------CCCcccc--cccceeec
Q 002420 68 EEEVCRICRNPGDPENPLR-YPCACSGSIKFVHQDCLLQWLNHS------NARQCEV--CKHAFSFS 125 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~-~PC~C~Gs~~~vH~~CL~~Wl~~s------~~~~Cel--Ck~~f~~~ 125 (925)
+.-.|.||+++....+... .||. |.+.++|+.++++.+ ....||. |+..+.+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~Cg-----H~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~ 65 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQ-----CIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQ 65 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTT-----EEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEEC
T ss_pred CCcCCcccCcccccccceEcCCCC-----CcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccC
Confidence 4567999997654322111 3564 679999999999753 2468999 99986543
No 69
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=87.01 E-value=0.27 Score=41.82 Aligned_cols=50 Identities=14% Similarity=0.367 Sum_probs=36.5
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCcccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHA 121 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~ 121 (925)
.......|.||.+. +.++ .|.++-+.+|..||.-.+.. ++.+.|+.|+..
T Consensus 8 ~~~~~~~C~vC~~~----~~ll---~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 8 NLAPGARCGVCGDG----TDVL---RCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTCCCTTTSCC----TTCE---ECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCCCCCcCCCCCC----CeEE---ECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 33455779999753 2343 26788899999999877765 367999999864
No 70
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=86.31 E-value=0.3 Score=42.08 Aligned_cols=50 Identities=18% Similarity=0.478 Sum_probs=33.6
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCC--Cc-ceecHHHHHHHHHc--cCCCcccccccc
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSG--SI-KFVHQDCLLQWLNH--SNARQCEVCKHA 121 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~G--s~-~~vH~~CL~~Wl~~--s~~~~CelCk~~ 121 (925)
.++++...| ||..... +.++. |.+ +. .++|..|+. +.. +++..|+.|+..
T Consensus 11 ~d~~~~~~C-~C~~~~~--g~MI~---CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 11 VDPNEPTYC-LCHQVSY--GEMIG---CDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp CCTTSCCCS-TTCCCSC--SSEEC---CSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred cCCCCCCEE-ECCCCCC--CCEeE---eeCCCCCCccEecccCC--cCcCCCCCEECCCCCcc
Confidence 345567888 8987543 34543 444 43 689999987 443 368999999764
No 71
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=85.95 E-value=0.12 Score=57.55 Aligned_cols=46 Identities=26% Similarity=0.688 Sum_probs=35.8
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcce-ecHHHHHHHHHccCCCcccccccceee
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKF-VHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~-vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
.+++..|.||++.. .++...||. |. +...|+.+| ..||+|+..+.-
T Consensus 292 l~~~~~C~IC~~~~--~~~v~lpCg-----H~~fC~~C~~~~------~~CP~CR~~i~~ 338 (345)
T 3t6p_A 292 LQEERTCKVCMDKE--VSVVFIPCG-----HLVVCQECAPSL------RKCPICRGIIKG 338 (345)
T ss_dssp HHTTCBCTTTSSSB--CCEEEETTC-----CEEECTTTGGGC------SBCTTTCCBCCE
T ss_pred CcCCCCCCccCCcC--CceEEcCCC-----ChhHhHHHHhcC------CcCCCCCCCccC
Confidence 35678999999754 356777875 56 888999988 589999998754
No 72
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=84.72 E-value=0.11 Score=46.49 Aligned_cols=58 Identities=22% Similarity=0.366 Sum_probs=40.9
Q ss_pred cccCCCcceEeCCCCCC-CCCcccccCCCCCcceecHHHHHHHHH------ccCCCcccccccceeec
Q 002420 65 EEEEEEVCRICRNPGDP-ENPLRYPCACSGSIKFVHQDCLLQWLN------HSNARQCEVCKHAFSFS 125 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~-~~~l~~PC~C~Gs~~~vH~~CL~~Wl~------~s~~~~CelCk~~f~~~ 125 (925)
..++...|.+|...... ++.++. |.++-+.+|+.|+.-=+. -++.+.|..|....+..
T Consensus 12 ~~e~~~~C~vC~~~~~~~~~~ll~---CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~~ 76 (88)
T 1wev_A 12 AMEMGLACVVCRQMTVASGNQLVE---CQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRM 76 (88)
T ss_dssp HHHHCCSCSSSCCCCCCTTCCEEE---CSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCCS
T ss_pred cCCCCCcCCCCCCCCCCCCCceEE---CCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhhh
Confidence 34467899999875442 355643 667778899999865443 24689999998876543
No 73
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=84.55 E-value=0.46 Score=42.99 Aligned_cols=50 Identities=18% Similarity=0.478 Sum_probs=32.9
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCC--Cc-ceecHHHHHHHHHc--cCCCcccccccc
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSG--SI-KFVHQDCLLQWLNH--SNARQCEVCKHA 121 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~G--s~-~~vH~~CL~~Wl~~--s~~~~CelCk~~ 121 (925)
.++++...| ||+.... +.++. |.+ +. .++|..|+. +.. +++..|+.|+..
T Consensus 31 ~d~~e~~yC-iC~~~~~--g~MI~---CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 31 VDPNEPTYC-LCHQVSY--GEMIG---CDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp CCSCCCBCS-TTCCBCC--SCCCC---CSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCC
T ss_pred cCCCCCcEE-ECCCCCC--CCEeE---ecCCCCCCCCEecccCC--cCcCCCCCEECcCccCc
Confidence 344566778 9987543 34542 444 33 789999987 433 368999999864
No 74
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=83.05 E-value=0.17 Score=45.34 Aligned_cols=54 Identities=24% Similarity=0.442 Sum_probs=37.0
Q ss_pred cccCCCcceEeCCCC-CCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccc
Q 002420 65 EEEEEEVCRICRNPG-DPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHA 121 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~-~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~ 121 (925)
+.++.+.|.||...+ +.++.++. |.++-..+|+.|+.-=..-.+.+.|+.|...
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~---CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILF---CDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEE---CSSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEE---CCCCCchhhcccCCCCccCCCceECccccCc
Confidence 345668999998754 23345542 5577778999998532233478999999864
No 75
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=83.02 E-value=0.23 Score=42.84 Aligned_cols=52 Identities=25% Similarity=0.494 Sum_probs=36.4
Q ss_pred cCCCcceEeCCCC-CCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccc
Q 002420 67 EEEEVCRICRNPG-DPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHA 121 (925)
Q Consensus 67 ~~~~~CrIC~~~~-~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~ 121 (925)
++.+.|.||...+ +.++.++. |.++-+.+|+.|+.-=..-++.+.|+.|...
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~---CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILF---CDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEE---CSSSCCEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEE---CCCCCCccccccCCCCcCCCCCcCCccCcCc
Confidence 4668999998764 33455543 5577788999998532233578999999764
No 76
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=81.53 E-value=0.12 Score=45.07 Aligned_cols=51 Identities=25% Similarity=0.574 Sum_probs=35.8
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcce-ecHHHHHHHHHccCCCcccccccceeec-cccc
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKF-VHQDCLLQWLNHSNARQCEVCKHAFSFS-PVYA 129 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~-vH~~CL~~Wl~~s~~~~CelCk~~f~~~-~iy~ 129 (925)
.+++..|.||++.. .++...||. |. +=..|+.+| ..||+|+.++.-. .+|.
T Consensus 15 l~~~~~C~IC~~~~--~~~v~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~~~~i~~ 67 (79)
T 2yho_A 15 LKEAMLCMVCCEEE--INSTFCPCG-----HTVCCESCAAQL------QSCPVCRSRVEHVQHVYL 67 (79)
T ss_dssp HHHHTBCTTTSSSB--CCEEEETTC-----BCCBCHHHHTTC------SBCTTTCCBCCEEEECBC
T ss_pred CCCCCEeEEeCccc--CcEEEECCC-----CHHHHHHHHHhc------CcCCCCCchhhCeEEEEe
Confidence 34557899998653 456778886 33 456898876 3999999987653 3453
No 77
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=81.18 E-value=0.2 Score=43.14 Aligned_cols=54 Identities=19% Similarity=0.412 Sum_probs=36.7
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCcccccccce
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHAF 122 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~f 122 (925)
++++...|.+|....+ ++.++ .|.++-.++|..|+.--... .+...|+.|....
T Consensus 14 ~~~~~~~C~~C~~~~~-~~~mi---~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 14 WGNQIWICPGCNKPDD-GSPMI---GCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp SSCEEECBTTTTBCCS-SCCEE---ECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred cCCCCcCCCCCCCCCC-CCCEE---EcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 3445577999987654 33453 36688899999997543322 2578999998754
No 78
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=79.14 E-value=0.84 Score=37.90 Aligned_cols=48 Identities=15% Similarity=0.259 Sum_probs=34.0
Q ss_pred CcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 70 EVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 70 ~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
-.|.||++.-+ +|.+. +-+.+-+=..|+++|++..+ +||+++.+...+
T Consensus 4 ~~CpIs~~~m~--dPV~~----~~sG~~yer~~I~~~l~~~~--~cP~t~~~L~~~ 51 (61)
T 2bay_A 4 MLCAISGKVPR--RPVLS----PKSRTIFEKSLLEQYVKDTG--NDPITNEPLSIE 51 (61)
T ss_dssp CCCTTTCSCCS--SEEEE----TTTTEEEEHHHHHHHHHHHS--BCTTTCCBCCGG
T ss_pred EEecCCCCCCC--CCEEe----CCCCcEEcHHHHHHHHHhCC--CCcCCcCCCChh
Confidence 46888876432 45554 12335688999999998653 599999987654
No 79
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=76.50 E-value=0.82 Score=38.04 Aligned_cols=50 Identities=18% Similarity=0.525 Sum_probs=35.4
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCcccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHA 121 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~ 121 (925)
++++.+.|.+|... +.++. |.++-+.+|..|+.-=+.. ++.+.|+.|..+
T Consensus 7 ~~~~~~~C~vC~~~----g~ll~---CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG----GEIIL---CDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCC----SSEEE---CSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCC----CcEEE---CCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 44567899999863 23432 5677789999998754332 468999999864
No 80
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=71.58 E-value=0.69 Score=45.92 Aligned_cols=52 Identities=19% Similarity=0.443 Sum_probs=35.8
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH---ccCCCcccccccce
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN---HSNARQCEVCKHAF 122 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~---~s~~~~CelCk~~f 122 (925)
++...| +|....++++.++. |.++-.++|..|+.---. ..+...|+.|+..-
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~---Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIG---CDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEE---CTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeE---CCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 466789 99876654555643 667889999999842111 24678999998753
No 81
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=71.57 E-value=1.8 Score=37.64 Aligned_cols=53 Identities=19% Similarity=0.419 Sum_probs=35.9
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc---cCCCcccccccce
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH---SNARQCEVCKHAF 122 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~---s~~~~CelCk~~f 122 (925)
+++...| ||....+.++.++. |..+..++|..|+.-=-.. ..+..|+.|+...
T Consensus 9 ~~~~~~C-~C~~~~d~~~~MIq---Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 9 ALVPVYC-LCRQPYNVNHFMIE---CGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCCS-TTSCSCCSSSCEEE---BTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cCCccEE-EcCCccCCCCceEE---cCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 3456778 89877654555654 5566799999997422111 2578999999765
No 82
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=71.39 E-value=0.45 Score=48.84 Aligned_cols=52 Identities=27% Similarity=0.579 Sum_probs=37.3
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCccccccccee
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHAFS 123 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~f~ 123 (925)
+++.++.|.+|...+ .++ .|.++-+.+|..|+..-+.. ++.+.|+.|...-+
T Consensus 3 ~d~~~~~C~~C~~~g----~ll---~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 3 DDPNEDWCAVCQNGG----DLL---CCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp CCSSCSSBTTTCCCE----EEE---ECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCCCCC----ceE---EcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 445668899997543 242 37788899999998665543 36799999987544
No 83
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=68.10 E-value=0.88 Score=37.89 Aligned_cols=52 Identities=13% Similarity=0.312 Sum_probs=36.2
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc---cCCCcccccccc
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH---SNARQCEVCKHA 121 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~---s~~~~CelCk~~ 121 (925)
++...|.+|....++++.++. |..+..++|..|+.---.. .++..|+.|+.+
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~---Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWIC---CDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEE---CSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccCCCCCEEE---ccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 466889999877655555654 5577799999997432211 256889999764
No 84
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=67.05 E-value=2.2 Score=36.77 Aligned_cols=51 Identities=22% Similarity=0.464 Sum_probs=33.0
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH-------ccCCCcccccccce
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN-------HSNARQCEVCKHAF 122 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~-------~s~~~~CelCk~~f 122 (925)
++...| ||....+ ++.++. |.++..++|..|+.-=.. ...+..|+.|+...
T Consensus 14 ~~~~~C-~C~~~~~-~~~MI~---Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 14 PNALYC-ICRQPHN-NRFMIC---CDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp TTCCCS-TTCCCCC-SSCEEE---CSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCCCEE-ECCCccC-CCCEEE---eCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 345778 8987654 334543 556779999999732111 23578999998654
No 85
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=66.44 E-value=3.9 Score=39.22 Aligned_cols=50 Identities=24% Similarity=0.554 Sum_probs=35.3
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHH------H---ccCCCccccccc
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWL------N---HSNARQCEVCKH 120 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl------~---~s~~~~CelCk~ 120 (925)
|++..++.|++|.+. +.|+ -|.++-+-+|.+|+..=+ + .++++.|..|..
T Consensus 52 d~Dg~~~~C~vC~dG----G~Ll---cCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 52 DSDGMDEQCRWCAEG----GNLI---CCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CTTSCBSSCTTTCCC----SEEE---ECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCCCcCeecCCC----CeeE---ecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 345566789999864 3353 245667889999998642 2 357899999954
No 86
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=64.86 E-value=0.69 Score=38.42 Aligned_cols=48 Identities=19% Similarity=0.511 Sum_probs=30.3
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCC--Cc-ceecHHHHHHHHHc--cCCCccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSG--SI-KFVHQDCLLQWLNH--SNARQCEVCKH 120 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~G--s~-~~vH~~CL~~Wl~~--s~~~~CelCk~ 120 (925)
++++...| ||+.... +.++. |.+ +. .++|..|+. +.. +++..|+.|+.
T Consensus 6 d~~e~~~C-~C~~~~~--g~mi~---CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 6 DPNEPTYC-LCHQVSY--GEMIG---CDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp ---CCEET-TTTEECC--SEEEE---CSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCCCEE-ECCCcCC--CCEEE---eCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 34456778 8986543 34542 444 33 789999987 543 36899999975
No 87
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=64.41 E-value=3.7 Score=40.01 Aligned_cols=49 Identities=27% Similarity=0.588 Sum_probs=35.5
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH---------ccCCCccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN---------HSNARQCEVCKH 120 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~---------~s~~~~CelCk~ 120 (925)
++..++.|++|.+.+ .|+ .|.++-+-+|..||..=+. .++.+.|..|..
T Consensus 59 ~Dg~~d~C~vC~~GG----~Ll---cCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 59 SDGMDEQCRWCAEGG----NLI---CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp TTSCBCSCSSSCCCS----SEE---ECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCCCeecccCCCC----cEE---eCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 345678999998643 354 2456667899999986552 467899999973
No 88
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=64.32 E-value=11 Score=33.87 Aligned_cols=55 Identities=18% Similarity=0.339 Sum_probs=35.0
Q ss_pred cCCCcceEeCCCC--CCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceee
Q 002420 67 EEEEVCRICRNPG--DPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSF 124 (925)
Q Consensus 67 ~~~~~CrIC~~~~--~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~ 124 (925)
....+|.||-++- +.++.++--| ..+---|=+.|.+-=.+. ++..|+.||++|+-
T Consensus 14 ~~~qiCqiCGD~VG~~~~Ge~FVAC--~eC~FPvCrpCyEYErke-G~q~CpqCktrYkr 70 (93)
T 1weo_A 14 LDGQFCEICGDQIGLTVEGDLFVAC--NECGFPACRPCYEYERRE-GTQNCPQCKTRYKR 70 (93)
T ss_dssp CSSCBCSSSCCBCCBCSSSSBCCSC--SSSCCCCCHHHHHHHHHT-SCSSCTTTCCCCCC
T ss_pred cCCCccccccCccccCCCCCEEEee--eccCChhhHHHHHHHHhc-cCccccccCCcccc
Confidence 4568999997642 2233343222 222223777998776653 56799999999974
No 89
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.23 E-value=0.75 Score=41.49 Aligned_cols=53 Identities=25% Similarity=0.462 Sum_probs=35.0
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH--ccCCCcccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN--HSNARQCEVCKHA 121 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~--~s~~~~CelCk~~ 121 (925)
+..+.+.|.||...++. +.++ .|.++-+.+|..||.-=+. -++.+.|+.|...
T Consensus 12 ~~~~~~~C~vC~~~~~~-~~ll---~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDED-DKLL---FCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCSSSCCSGGG-GGCE---ECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred hccCCCCCccCCCcCCC-CCEE---EcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 34456789999876543 3342 3557778899999752111 2367899999764
No 90
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=62.74 E-value=1.1 Score=38.24 Aligned_cols=55 Identities=20% Similarity=0.409 Sum_probs=34.3
Q ss_pred cccccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHH-HccCCCccccccc
Q 002420 61 IEEEEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWL-NHSNARQCEVCKH 120 (925)
Q Consensus 61 ~~~~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl-~~s~~~~CelCk~ 120 (925)
.+.+++.+...| ||....+ ++.++. |.++..++|-.|+.-=- ...++..|+.|+.
T Consensus 11 ~~~~~~~~~~~C-iC~~~~~-~~~MIq---Cd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 11 RENLYFQGLVTC-FCMKPFA-GRPMIE---CNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp ---CTTTTCCCS-TTCCCCT-TCCEEE---CTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred cccCCCCCceEe-ECCCcCC-CCCEEE---CCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 334555677889 9987554 445654 55667999999974211 1125678888864
No 91
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=62.22 E-value=1 Score=52.18 Aligned_cols=52 Identities=21% Similarity=0.427 Sum_probs=33.6
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc---cCCCcccccccce
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH---SNARQCEVCKHAF 122 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~---s~~~~CelCk~~f 122 (925)
.+...| +|....++++.++. |..|..++|..|+--=-.. -++..|+.|+...
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIq---Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIE---CDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEE---BTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEE---ccCCCCceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 445556 88766554556654 5567799999997321111 1468999998653
No 92
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=61.97 E-value=1.5 Score=40.39 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=27.5
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN 108 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~ 108 (925)
++++.|.+|.+.++.+ +++ .|.+.-+.+|..||.-...
T Consensus 5 ~~~~~C~~C~~~g~~~-~ll---~C~~C~~~~H~~Cl~~~~~ 42 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLL-DQF---FCTTCGQHYHGMCLDIAVT 42 (111)
T ss_dssp CCCSCBTTTCCCCCTT-TSE---ECSSSCCEECTTTTTCCCC
T ss_pred CCCCCCcCCCCCCCCc-CCe---ECCCCCCCcChHHhCCccc
Confidence 4678999998776532 343 3567788999999976653
No 93
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=60.32 E-value=2.4 Score=39.42 Aligned_cols=48 Identities=23% Similarity=0.368 Sum_probs=30.7
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCccccc
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVC 118 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelC 118 (925)
.+.++++.|.+|.+. ++++ -|..+++-+.+|..||. +.. ++++.|+-|
T Consensus 10 ~~~~~~~~C~~C~~~----G~ll-~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c 59 (107)
T 4gne_A 10 PKQMHEDYCFQCGDG----GELV-MCDKKDCPKAYHLLCLN--LTQPPYGKWECPWH 59 (107)
T ss_dssp CCCSSCSSCTTTCCC----SEEE-ECCSTTCCCEECTGGGT--CSSCCSSCCCCGGG
T ss_pred CcCCCCCCCCcCCCC----CcEe-EECCCCCCcccccccCc--CCcCCCCCEECCCC
Confidence 344567889999843 3454 37644666799999997 543 245556543
No 94
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=59.56 E-value=3.1 Score=36.13 Aligned_cols=54 Identities=19% Similarity=0.449 Sum_probs=32.6
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc-------cCCCcccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH-------SNARQCEVCKHA 121 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~-------s~~~~CelCk~~ 121 (925)
++++...| ||....+ .+.++. |.-..+..|+|-.|+--=-.. .++..|+.|+.+
T Consensus 12 ~~~~~~~C-iC~~~~~-~g~MI~-CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 12 QPEIKVRC-VCGNSLE-TDSMIQ-CEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp SCCCCCCC-SSCCCCC-CSCEEE-CSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCCCCEEe-ECCCcCC-CCCEEE-ECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 44466788 8987633 344543 442244579999996321111 147899999864
No 95
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=58.91 E-value=1.5 Score=44.05 Aligned_cols=48 Identities=29% Similarity=0.648 Sum_probs=34.7
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCcccccccce
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHAF 122 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~f 122 (925)
+++.|.+|...+ .++ .|.++-+.+|..|+..-+.. ++.+.|+.|+..=
T Consensus 3 ~~~~C~~C~~~g----~ll---~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNGG----ELL---CCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCCS----SCE---ECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCCC----eee---ecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 457899998542 242 36778889999998665543 3679999999754
No 96
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=56.79 E-value=1.2 Score=37.30 Aligned_cols=53 Identities=23% Similarity=0.438 Sum_probs=36.5
Q ss_pred ccCCCcceEeCCCCC-CCCCcccccCCCCCcceecHHHHHHHH-----HccCCCcccccccc
Q 002420 66 EEEEEVCRICRNPGD-PENPLRYPCACSGSIKFVHQDCLLQWL-----NHSNARQCEVCKHA 121 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~-~~~~l~~PC~C~Gs~~~vH~~CL~~Wl-----~~s~~~~CelCk~~ 121 (925)
++++..|.+|....+ .++.++ .|.++-+.+|+.|+.-=+ ..++.+.|+.|...
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll---~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMV---ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEE---ECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCEE---ECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 346789999986532 234453 266777889999986422 24578999999764
No 97
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=56.64 E-value=3.3 Score=32.77 Aligned_cols=46 Identities=30% Similarity=0.650 Sum_probs=31.2
Q ss_pred cceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCccccccc
Q 002420 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKH 120 (925)
Q Consensus 71 ~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~ 120 (925)
.|.+|...++++ .++ .|.++-+.+|..|+.-=+.. ++.+.|+.|..
T Consensus 2 ~C~vC~~~~~~~-~ll---~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDD-KLI---LCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCS-CCE---ECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCC-CEE---ECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 589998765543 443 25577789999998432221 35789999975
No 98
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=54.92 E-value=1.3 Score=40.00 Aligned_cols=50 Identities=30% Similarity=0.669 Sum_probs=31.1
Q ss_pred ccccCCCcceEeCCCCCCCCCcc--cccCCCCCcceecHHHHHHHHHc--cCCCcccc-ccc
Q 002420 64 EEEEEEEVCRICRNPGDPENPLR--YPCACSGSIKFVHQDCLLQWLNH--SNARQCEV-CKH 120 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~--~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~Cel-Ck~ 120 (925)
+++++...| ||..... +.++ .-|.|. ..++|..|+- |.. .++..|+. |+.
T Consensus 21 ~~~~~~~yC-iC~~~~~--g~MI~CD~c~C~--~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 21 NNNQEEVYC-FCRNVSY--GPMVACDNPACP--FEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp ---CCSCCS-TTTCCCS--SSEECCCSSSCS--CSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCCCCCcEE-EeCCCCC--CCEEEecCCCCc--cccCcCccCC--CCcCCCCCccCChhhcc
Confidence 344566788 9986543 2354 234454 2789999985 332 36899999 984
No 99
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=54.85 E-value=1.7 Score=36.03 Aligned_cols=50 Identities=24% Similarity=0.529 Sum_probs=34.1
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCcccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHA 121 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~ 121 (925)
+++++..|.+|... +.++ .|.++-+.+|..|+.-=+.. ++.+.|+.|..+
T Consensus 5 ~d~~~~~C~vC~~~----g~ll---~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 5 SDHHMEFCRVCKDG----GELL---CCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCSSCTTTCCC----SSCB---CCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred ccCCCCcCCCCCCC----CCEE---EcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 34567889999753 2342 35677788999998643332 367999999763
No 100
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=52.63 E-value=1.5 Score=36.26 Aligned_cols=47 Identities=19% Similarity=0.494 Sum_probs=30.0
Q ss_pred ccCCCcceEeCCCCCCCCCcccccCCCC--Cc-ceecHHHHHHHHHc--cCCCccccccc
Q 002420 66 EEEEEVCRICRNPGDPENPLRYPCACSG--SI-KFVHQDCLLQWLNH--SNARQCEVCKH 120 (925)
Q Consensus 66 ~~~~~~CrIC~~~~~~~~~l~~PC~C~G--s~-~~vH~~CL~~Wl~~--s~~~~CelCk~ 120 (925)
+++...| ||+.... +.++. |.+ +. .++|..|+. +.. +++..|+.|+.
T Consensus 6 ~~e~~yC-~C~~~~~--g~mi~---CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 6 SNEPTYC-LCHQVSY--GEMIG---CDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp --CCEET-TTTEECC--SEEEE---CSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCcEE-ECCCCCC--CCeeE---eeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 3456777 8986543 34542 444 43 699999987 443 26899999975
No 101
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=52.01 E-value=4.8 Score=34.29 Aligned_cols=54 Identities=17% Similarity=0.272 Sum_probs=34.4
Q ss_pred ccccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH--ccCCCcccccccc
Q 002420 64 EEEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN--HSNARQCEVCKHA 121 (925)
Q Consensus 64 ~~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~--~s~~~~CelCk~~ 121 (925)
+++++...| ||....+.++.++. |..+..++|..|+--=-. ...+..|+.|+.+
T Consensus 11 ~~~~~~~~C-~C~~~~~~g~~mI~---Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 11 GVDNWKVDC-KCGTKDDDGERMLA---CDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp SSCSSEECC-TTCCCSCCSSCEEE---CSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CCCCcceEe-eCCCccCCCCcEEE---CCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 344556778 79876544445553 556789999999642111 1256889999764
No 102
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.57 E-value=1.5 Score=35.71 Aligned_cols=47 Identities=28% Similarity=0.629 Sum_probs=32.6
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCccccccc
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKH 120 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~ 120 (925)
++++.|.+|... +.++ .|.++-+.+|..|+..=+.. ++.+.|+.|..
T Consensus 7 ~~~~~C~vC~~~----g~ll---~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS----GQLL---MCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS----SCCE---ECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCccCCCC----CeEE---EcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 456889999864 2343 25577789999998643322 35788999865
No 103
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=50.85 E-value=6.9 Score=36.17 Aligned_cols=34 Identities=21% Similarity=0.470 Sum_probs=24.6
Q ss_pred CCCcceEeCCCCC-----CCCCcccccCCCCCcceecHHHHH
Q 002420 68 EEEVCRICRNPGD-----PENPLRYPCACSGSIKFVHQDCLL 104 (925)
Q Consensus 68 ~~~~CrIC~~~~~-----~~~~l~~PC~C~Gs~~~vH~~CL~ 104 (925)
..++|.+|...++ ..++|+ .|.+.-+.+|..||.
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll---~C~~C~~~~H~~Cl~ 42 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELI---SCADCGNSGHPSCLK 42 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCE---ECTTTCCEECHHHHT
T ss_pred cCccccccCCchhhCcCCCchhce---EhhhcCCCCCCchhc
Confidence 5689999987542 223565 477777889999995
No 104
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=46.73 E-value=7.8 Score=35.11 Aligned_cols=48 Identities=23% Similarity=0.475 Sum_probs=30.3
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH-ccCCCccccccc
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN-HSNARQCEVCKH 120 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~-~s~~~~CelCk~ 120 (925)
+.-.| ||....+ ++.++ .|.++-.++|..|+.-=.. ..+...|+.|+.
T Consensus 27 d~vrC-iC~~~~~-~~~mi---~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 27 DVTRC-ICGFTHD-DGYMI---CCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CBCCC-TTSCCSC-SSCEE---EBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CCEEe-ECCCccC-CCcEE---EcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 33457 7865544 34554 3677889999999742111 124689999974
No 105
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=45.55 E-value=4.9 Score=36.10 Aligned_cols=51 Identities=27% Similarity=0.660 Sum_probs=36.1
Q ss_pred cccCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCcccccccce
Q 002420 65 EEEEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHAF 122 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~f 122 (925)
.+++.+.|.+|...+ .++ .|.++-+-+|..|+..=+.. ++.+.|+.|...-
T Consensus 21 ~d~n~~~C~vC~~~g----~LL---~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 21 LDDSATICRVCQKPG----DLV---MCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSSSCCSSSCSSS----CCE---ECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred cCCCCCcCcCcCCCC----CEE---ECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 445668999998643 343 37788899999998543322 3679999998753
No 106
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=45.05 E-value=2.2 Score=35.18 Aligned_cols=48 Identities=27% Similarity=0.625 Sum_probs=33.4
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH--ccCCCcccccccce
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN--HSNARQCEVCKHAF 122 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~--~s~~~~CelCk~~f 122 (925)
.++.|.+|... +.++ .|.++-+.+|..|+..=+. -++.+.|+.|....
T Consensus 4 ~~~~C~vC~~~----g~ll---~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 4 HEDFCSVCRKS----GQLL---MCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCSSCTTTCCC----SSCE---ECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCcCCCCC----CcEE---EcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 56889999864 2343 2567889999999874332 23678999997643
No 107
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=44.06 E-value=8.9 Score=32.31 Aligned_cols=50 Identities=24% Similarity=0.490 Sum_probs=30.9
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCC-CCcceecHHHHHH------HHH--ccCCCcccccc
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACS-GSIKFVHQDCLLQ------WLN--HSNARQCEVCK 119 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~-Gs~~~vH~~CL~~------Wl~--~s~~~~CelCk 119 (925)
++...|.+|+...+++..++ .|. ++.+++|..|+-- =+. .+....|+-|+
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI---~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAI---LCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEE---EBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccCCCCCeE---ecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 45678999998776655554 344 6679999999621 011 11256788775
No 108
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=43.51 E-value=6.2 Score=36.64 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=23.2
Q ss_pred CcceEeCCCCC------CCCCcccccCCCCCcceecHHHHHHH
Q 002420 70 EVCRICRNPGD------PENPLRYPCACSGSIKFVHQDCLLQW 106 (925)
Q Consensus 70 ~~CrIC~~~~~------~~~~l~~PC~C~Gs~~~vH~~CL~~W 106 (925)
+.|.+|+..+. ..++|+ .|.+.-+.+|..||.-.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li---~C~~C~~~~H~~Cl~~~ 41 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELV---SCADCGRSGHPTCLQFT 41 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCE---ECSSSCCEECTTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCe---EeCCCCCccchhhCCCh
Confidence 67999986542 123554 35667788999999755
No 109
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=43.39 E-value=5.8 Score=41.46 Aligned_cols=49 Identities=24% Similarity=0.472 Sum_probs=29.5
Q ss_pred CCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cC-CCcccccccc
Q 002420 69 EEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SN-ARQCEVCKHA 121 (925)
Q Consensus 69 ~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~-~~~CelCk~~ 121 (925)
+..|.+|....+.+ .++ .|.++-+.+|..||.-=+.. ++ .+.|+.|...
T Consensus 174 ~c~C~vC~~~~~~~-~lL---~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 174 VCACHLCGGRQDPD-KQL---MCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TTSCSSSCCCCC---CCE---ECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCCcCCCCCCCCC-CeE---EcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 34688887654433 343 47788889999998632221 35 7899999753
No 110
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=42.58 E-value=1.5 Score=36.62 Aligned_cols=49 Identities=20% Similarity=0.524 Sum_probs=29.9
Q ss_pred cccCCCcceEeCCCCCCCCCccc--ccCCCCCcceecHHHHHHHHHc--cCCCccccccc
Q 002420 65 EEEEEEVCRICRNPGDPENPLRY--PCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKH 120 (925)
Q Consensus 65 ~~~~~~~CrIC~~~~~~~~~l~~--PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~ 120 (925)
++++...| +|+.... +.++. -|.|+ ..++|..|+. +.. +++..|+.|+.
T Consensus 7 d~~e~~yC-~C~~~~~--g~MI~CD~c~C~--~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 7 DPNEPTYC-LCNQVSY--GEMIGCDNEQCP--IEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp ---CCEET-TTTEECC--SEEEECSCTTCS--SCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CCCCCcEE-ECCCCCC--CCeeeeeCCCCC--cccEecccCC--cCcCCCCCEECcCccc
Confidence 34456778 8986533 24542 23343 2899999986 332 36799999975
No 111
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=38.92 E-value=25 Score=39.27 Aligned_cols=42 Identities=24% Similarity=0.572 Sum_probs=29.9
Q ss_pred CCCcccccCCCCCcceecHHHH--HHHHH---ccCCCcccccccceeecc
Q 002420 82 ENPLRYPCACSGSIKFVHQDCL--LQWLN---HSNARQCEVCKHAFSFSP 126 (925)
Q Consensus 82 ~~~l~~PC~C~Gs~~~vH~~CL--~~Wl~---~s~~~~CelCk~~f~~~~ 126 (925)
...+..||+.+.| -|-.|. ..|+. .++++.||+|+....+.-
T Consensus 256 ~~ri~~PvRg~~C---~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~d 302 (371)
T 3i2d_A 256 YTRMKYPSKSINC---KHLQCFDALWFLHSQLQIPTWQCPVCQIDIALEN 302 (371)
T ss_dssp SSBCSSEEEETTC---CSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGG
T ss_pred cccccccCcCCcC---CCcceECHHHHHHHhhcCCceeCCCCCcccCHHH
Confidence 3467789988877 576673 44554 457899999999876543
No 112
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=38.43 E-value=4.7 Score=34.68 Aligned_cols=52 Identities=19% Similarity=0.426 Sum_probs=32.8
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc---cCCCcccccccce
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH---SNARQCEVCKHAF 122 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~---s~~~~CelCk~~f 122 (925)
++...| ||....++++.++. |..+..++|..|+.-=-.. .+...|+.|....
T Consensus 8 ~~~~yC-iC~~~~~~~~~MI~---Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 8 TVPVYC-VCRLPYDVTRFMIE---CDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp CCCEET-TTTEECCTTSCEEE---CTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred CCeeEE-ECCCcCCCCCCEEE---cCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 344455 78765554556654 5566799999997422111 1468899998654
No 113
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=38.09 E-value=6.5 Score=36.36 Aligned_cols=48 Identities=21% Similarity=0.610 Sum_probs=31.6
Q ss_pred CcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCccccccc
Q 002420 70 EVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKH 120 (925)
Q Consensus 70 ~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~ 120 (925)
..|.+|...++.++.++. |.+.-+.+|..||.-=+.. ++.+.|+.|+.
T Consensus 62 ~~C~vC~~~~~~~~~ll~---Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLF---CDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCCTTCCCEE---CTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CccccccCcCCCccceEE---cCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 367777765444445532 5666688999998543432 35789999985
No 114
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=35.69 E-value=7.6 Score=31.03 Aligned_cols=46 Identities=20% Similarity=0.408 Sum_probs=29.3
Q ss_pred cceEeCCCCCCCCCcccccCCC-CCcceecHHHHHHHHH--ccCCCcccccc
Q 002420 71 VCRICRNPGDPENPLRYPCACS-GSIKFVHQDCLLQWLN--HSNARQCEVCK 119 (925)
Q Consensus 71 ~CrIC~~~~~~~~~l~~PC~C~-Gs~~~vH~~CL~~Wl~--~s~~~~CelCk 119 (925)
.|-+|+...+++..++. |. +...++|..|+--=.. ...+..|+.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~---Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQ---CDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEE---CTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEE---eCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 46778777655555654 55 4569999999642211 13678898885
No 115
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=35.04 E-value=6.4 Score=39.78 Aligned_cols=47 Identities=30% Similarity=0.697 Sum_probs=33.3
Q ss_pred CCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cCCCcccccccce
Q 002420 69 EEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHAF 122 (925)
Q Consensus 69 ~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~f 122 (925)
++.|.+|...+ .++ .|.++-+.+|..|+.-=+.. ++.+.|+.|+..-
T Consensus 2 ~~~C~~C~~~g----~ll---~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPG----DLV---MCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCS----SCC---CCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCC----cee---ECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 57899998543 242 27788889999997432222 3678999998764
No 116
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=30.79 E-value=5.5 Score=33.44 Aligned_cols=48 Identities=33% Similarity=0.725 Sum_probs=33.8
Q ss_pred cCCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHH--ccCCCcccccccc
Q 002420 67 EEEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLN--HSNARQCEVCKHA 121 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~--~s~~~~CelCk~~ 121 (925)
.+++.|.+|...+ .++ .|.++-+.+|..|+..=+. -++.+.|+.|...
T Consensus 6 ~~~~~C~vC~~~g----~ll---~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDGG----ELI---CCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCCS----SCE---ECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCCC----CEE---EcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 4678999998642 343 3567778899999864332 2368999999754
No 117
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.34 E-value=7.2 Score=33.33 Aligned_cols=50 Identities=22% Similarity=0.500 Sum_probs=31.4
Q ss_pred cCCCcceEeCCCCCCCCCccc--ccCCCCCcceecHHHHHHHHHc--cCCCccccccccee
Q 002420 67 EEEEVCRICRNPGDPENPLRY--PCACSGSIKFVHQDCLLQWLNH--SNARQCEVCKHAFS 123 (925)
Q Consensus 67 ~~~~~CrIC~~~~~~~~~l~~--PC~C~Gs~~~vH~~CL~~Wl~~--s~~~~CelCk~~f~ 123 (925)
++...| ||..... +.++. -|.|+ ..++|.+|+- +.. .++..|+.|+..-.
T Consensus 4 ~~~~yC-~C~~~~~--g~MI~CD~cdC~--~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~~ 57 (70)
T 1x4i_A 4 GSSGYC-ICNQVSY--GEMVGCDNQDCP--IEWFHYGCVG--LTEAPKGKWYCPQCTAAMK 57 (70)
T ss_dssp SCCCCS-TTSCCCC--SSEECCSCTTCS--CCCEEHHHHT--CSSCCSSCCCCHHHHHHHH
T ss_pred CCCeEE-EcCCCCC--CCEeEeCCCCCC--ccCCcccccc--cCcCCCCCEECCCCCcccc
Confidence 455677 4876533 24542 23343 4799999976 322 35789999987543
No 118
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=29.13 E-value=4.8 Score=33.97 Aligned_cols=50 Identities=20% Similarity=0.425 Sum_probs=27.9
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc------cCCCccccccc
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH------SNARQCEVCKH 120 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~------s~~~~CelCk~ 120 (925)
+.-.| ||....+ ++.++. |.+..+..+.|-.|+--=-.. ..+..|+.||.
T Consensus 9 ~~v~C-~C~~~~~-~g~mI~-CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 9 AKVRC-ICSSTMV-NDSMIQ-CEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp CEECC-TTCCCSC-CSCEEE-CSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCEEe-ECCCCcC-CCCEEE-ECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 34556 7865443 334543 653334589999995210000 12578999974
No 119
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.92 E-value=9.5 Score=33.19 Aligned_cols=47 Identities=28% Similarity=0.495 Sum_probs=30.9
Q ss_pred CcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cC-CCccccccc
Q 002420 70 EVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SN-ARQCEVCKH 120 (925)
Q Consensus 70 ~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~-~~~CelCk~ 120 (925)
..|.+|....+. +.++ .|.+.-+.+|..||.-=+.. ++ .+.|+.|..
T Consensus 27 c~C~vC~~~~~~-~~ll---~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEP-NMQL---LCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCS-TTEE---ECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCC-CCEE---EcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 378999765443 3443 36677788999997522221 34 789999964
No 120
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=27.62 E-value=18 Score=36.55 Aligned_cols=51 Identities=24% Similarity=0.511 Sum_probs=33.7
Q ss_pred CCcceEeCCCCCCCC---CcccccCCCCCcceecHHHHHH------HHH---ccCCCcccccccce
Q 002420 69 EEVCRICRNPGDPEN---PLRYPCACSGSIKFVHQDCLLQ------WLN---HSNARQCEVCKHAF 122 (925)
Q Consensus 69 ~~~CrIC~~~~~~~~---~l~~PC~C~Gs~~~vH~~CL~~------Wl~---~s~~~~CelCk~~f 122 (925)
+..|.||....++++ +++ .|.++-.|+|..|..- =++ ......|+.|+..-
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MI---qCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~ 64 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMM---QCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 64 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEE---ECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSS
T ss_pred cCcCCCCcCccCCcccCCCeE---ECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCC
Confidence 457999987655433 343 5789999999999631 111 11268999998753
No 121
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=27.57 E-value=49 Score=36.78 Aligned_cols=41 Identities=22% Similarity=0.549 Sum_probs=29.2
Q ss_pred CCCcccccCCCCCcceecHHH--HHHHHH---ccCCCcccccccceeec
Q 002420 82 ENPLRYPCACSGSIKFVHQDC--LLQWLN---HSNARQCEVCKHAFSFS 125 (925)
Q Consensus 82 ~~~l~~PC~C~Gs~~~vH~~C--L~~Wl~---~s~~~~CelCk~~f~~~ 125 (925)
...+..||+-+.| -|-.| +..|+. .++++.||+|+....+.
T Consensus 222 ~~ri~~P~Rg~~C---~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~ 267 (360)
T 4fo9_A 222 KMRLTIPCRAVTC---THLQCFDAALYLQMNEKKPTWICPVCDKKAAYE 267 (360)
T ss_dssp CSBCSSEEEETTC---CCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGG
T ss_pred cceeccCCcCCCC---CCCccCCHHHHHHHHhhCCCeECCCCCcccCHH
Confidence 3467788887766 57667 344553 45789999999987654
No 122
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=26.52 E-value=7.2 Score=33.25 Aligned_cols=47 Identities=23% Similarity=0.465 Sum_probs=29.1
Q ss_pred cceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHc--cC-CCcccccccc
Q 002420 71 VCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNH--SN-ARQCEVCKHA 121 (925)
Q Consensus 71 ~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~--s~-~~~CelCk~~ 121 (925)
.|.+|...++ ++.++ .|.+.-+.+|..||.-=+.. ++ .+.|+.|..+
T Consensus 20 ~C~~C~~~~~-~~~ll---~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQD-PDKQL---MCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSC-GGGEE---ECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCC-CCCEE---EcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 4556664433 33443 35677788999997622221 34 7899999753
No 123
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=22.57 E-value=11 Score=31.28 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=22.9
Q ss_pred CcceecHHHHHHHHHccCCCcccccccceeecccccC
Q 002420 94 SIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE 130 (925)
Q Consensus 94 s~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~~iy~~ 130 (925)
+..|+--.| +|...++++.|++|+++=.+-+-|..
T Consensus 17 CraylNP~~--~~~~~~~~W~C~~C~~~N~~P~~Y~~ 51 (59)
T 2yrc_A 17 CRAVLNPLC--QVDYRAKLWACNFCYQRNQFPPSYAG 51 (59)
T ss_dssp TCCBCCTTS--EEEGGGTEEECSSSCCEEECCSCCSS
T ss_pred CCeEECCce--EEECCCCEEEcccCCCcCCCCHHHhc
Confidence 444444443 33445678999999998877666653
No 124
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=21.27 E-value=1.2e+02 Score=27.52 Aligned_cols=48 Identities=23% Similarity=0.585 Sum_probs=33.6
Q ss_pred CCCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHHHHHccCCCcccccccceeec
Q 002420 68 EEEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFS 125 (925)
Q Consensus 68 ~~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~Wl~~s~~~~CelCk~~f~~~ 125 (925)
+.--|+.|.-+. .-|+ +|. -||.=..||..-++.| ..|++||++.-.+
T Consensus 27 G~~nCKsCWf~~---k~LV---~C~--dHYLCl~CLtlmL~~S--drCpIC~~pLPtk 74 (99)
T 2ko5_A 27 GPQFCKSCWFEN---KGLV---ECN--NHYLCLNCLTLLLSVS--NRCPICKMPLPTK 74 (99)
T ss_dssp CCCCCCSSCSCC---SSEE---ECS--SCEEEHHHHHHTCSSS--SEETTTTEECCCC
T ss_pred CcccChhhcccc---CCee---eec--chhhHHHHHHHHHhhc--cCCcccCCcCCcc
Confidence 456788887643 2354 233 4889999998877554 7999999987553
No 125
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=21.02 E-value=26 Score=32.04 Aligned_cols=53 Identities=21% Similarity=0.518 Sum_probs=33.8
Q ss_pred CCcceEeCCCCCCCCCcccccCCCCCcceecHHHHHH----H--H--HccCCCccccccccee
Q 002420 69 EEVCRICRNPGDPENPLRYPCACSGSIKFVHQDCLLQ----W--L--NHSNARQCEVCKHAFS 123 (925)
Q Consensus 69 ~~~CrIC~~~~~~~~~l~~PC~C~Gs~~~vH~~CL~~----W--l--~~s~~~~CelCk~~f~ 123 (925)
...|.||+...++++.++. |. .++..|+|.+|+-- - + +...+..|+.|...-.
T Consensus 3 ~~~C~iC~~p~~~~~~mi~-Cd-d~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAIL-CE-ASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEE-CT-TTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCCCCEEE-ec-CCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 3579999987655555544 32 24459999999621 0 1 1125689999997543
Done!