Query 002425
Match_columns 924
No_of_seqs 369 out of 1859
Neff 5.4
Searched_HMMs 46136
Date Thu Mar 28 23:41:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002425.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002425hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02436 cellulose synthase A 100.0 8E-267 2E-271 2334.8 74.0 920 5-924 171-1094(1094)
2 PLN02400 cellulose synthase 100.0 1E-262 2E-267 2308.5 72.6 916 3-923 156-1085(1085)
3 PLN02638 cellulose synthase A 100.0 7E-256 2E-260 2249.2 71.6 904 10-923 158-1079(1079)
4 PLN02915 cellulose synthase A 100.0 7E-254 1E-258 2227.4 72.9 877 37-923 135-1044(1044)
5 PLN02189 cellulose synthase 100.0 4E-245 9E-250 2151.9 70.5 869 10-923 170-1040(1040)
6 PLN02195 cellulose synthase A 100.0 4E-243 8E-248 2126.0 70.9 862 52-923 108-977 (977)
7 PLN02248 cellulose synthase-li 100.0 2E-218 4E-223 1925.9 66.0 784 99-911 262-1125(1135)
8 PF03552 Cellulose_synt: Cellu 100.0 2E-213 3E-218 1838.8 44.9 713 201-917 1-720 (720)
9 PLN02190 cellulose synthase-li 100.0 1E-195 3E-200 1692.2 60.8 725 103-903 7-756 (756)
10 PLN02893 Cellulose synthase-li 100.0 1E-187 3E-192 1633.3 62.8 706 102-901 9-728 (734)
11 TIGR03030 CelA cellulose synth 100.0 1.4E-67 3E-72 635.5 45.5 491 122-877 57-561 (713)
12 PRK11498 bcsA cellulose syntha 100.0 1.8E-67 3.8E-72 635.4 44.0 472 124-876 189-673 (852)
13 PRK05454 glucosyltransferase M 100.0 1.3E-36 2.9E-41 363.3 43.7 361 120-720 40-419 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 1.3E-34 2.7E-39 310.6 21.7 182 366-673 67-253 (254)
15 COG1215 Glycosyltransferases, 100.0 1.1E-30 2.4E-35 295.3 27.7 233 198-677 53-290 (439)
16 PRK14583 hmsR N-glycosyltransf 100.0 2.7E-29 5.9E-34 288.5 31.6 232 196-678 72-307 (444)
17 PRK11204 N-glycosyltransferase 100.0 1.1E-27 2.3E-32 271.9 31.8 231 195-678 50-286 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 7.3E-28 1.6E-32 276.5 30.1 283 195-729 45-341 (439)
19 PRK14716 bacteriophage N4 adso 99.9 5.1E-26 1.1E-30 264.5 28.0 266 196-703 63-355 (504)
20 cd06421 CESA_CelA_like CESA_Ce 99.9 9.9E-26 2.1E-30 232.2 18.8 229 199-675 1-234 (234)
21 PRK11234 nfrB bacteriophage N4 99.9 1E-24 2.2E-29 262.8 26.8 241 196-676 60-334 (727)
22 cd06437 CESA_CaSu_A2 Cellulose 99.9 5.8E-25 1.3E-29 228.7 21.4 228 199-671 1-232 (232)
23 cd06435 CESA_NdvC_like NdvC_li 99.9 9.6E-24 2.1E-28 219.2 21.5 173 368-677 58-234 (236)
24 cd06427 CESA_like_2 CESA_like_ 99.9 8.1E-24 1.8E-28 222.3 19.8 232 199-677 1-236 (241)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 4.8E-24 1E-28 220.0 7.0 224 199-670 1-228 (228)
26 PRK15489 nfrB bacteriophage N4 99.9 6.4E-20 1.4E-24 219.5 28.2 172 381-676 139-342 (703)
27 cd04190 Chitin_synth_C C-termi 99.9 2.1E-21 4.5E-26 205.8 11.5 166 398-673 71-243 (244)
28 TIGR03472 HpnI hopanoid biosyn 99.8 4E-20 8.7E-25 208.3 20.0 235 196-671 38-272 (373)
29 cd04192 GT_2_like_e Subfamily 99.8 8.5E-20 1.8E-24 186.9 16.9 226 203-670 1-229 (229)
30 cd02520 Glucosylceramide_synth 99.8 1.4E-19 2.9E-24 184.6 17.0 195 199-670 1-195 (196)
31 COG2943 MdoH Membrane glycosyl 99.8 1.6E-16 3.5E-21 179.2 35.7 217 367-716 213-434 (736)
32 cd06434 GT2_HAS Hyaluronan syn 99.8 4.9E-18 1.1E-22 175.8 18.1 59 381-448 62-120 (235)
33 cd06439 CESA_like_1 CESA_like_ 99.8 9.1E-18 2E-22 176.1 19.2 128 195-448 25-152 (251)
34 TIGR03469 HonB hopene-associat 99.7 6.1E-16 1.3E-20 175.2 29.2 133 195-441 36-169 (384)
35 cd02525 Succinoglycan_BP_ExoA 99.7 7.7E-16 1.7E-20 159.7 19.7 54 622-677 180-233 (249)
36 PF13632 Glyco_trans_2_3: Glyc 99.6 6E-16 1.3E-20 156.8 8.7 138 403-671 1-143 (193)
37 cd06436 GlcNAc-1-P_transferase 99.6 1.4E-14 3.1E-19 147.7 12.0 115 367-488 51-175 (191)
38 cd06438 EpsO_like EpsO protein 99.5 1.6E-13 3.5E-18 138.3 11.4 102 381-488 61-167 (183)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.4 6.2E-12 1.3E-16 127.1 17.6 122 199-444 1-123 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.4 2.3E-11 5E-16 123.1 17.3 65 368-446 57-122 (201)
41 PF13506 Glyco_transf_21: Glyc 99.3 1.8E-11 4E-16 125.0 10.0 155 381-669 15-175 (175)
42 cd06433 GT_2_WfgS_like WfgS an 99.2 1.7E-10 3.7E-15 115.1 16.2 56 382-446 61-117 (202)
43 cd04196 GT_2_like_d Subfamily 99.2 3.1E-10 6.7E-15 115.1 15.5 57 381-446 64-121 (214)
44 cd02522 GT_2_like_a GT_2_like_ 99.2 7.6E-10 1.7E-14 113.5 18.0 40 201-246 1-40 (221)
45 cd02510 pp-GalNAc-T pp-GalNAc- 99.2 1E-09 2.3E-14 119.6 19.9 110 203-429 2-111 (299)
46 cd06420 GT2_Chondriotin_Pol_N 99.1 1.2E-09 2.7E-14 108.6 16.6 42 382-429 65-106 (182)
47 PF03142 Chitin_synth_2: Chiti 99.1 4.8E-09 1E-13 123.1 23.6 54 621-676 324-379 (527)
48 cd04186 GT_2_like_c Subfamily 99.1 1.1E-09 2.4E-14 106.0 14.9 52 381-441 59-111 (166)
49 cd06913 beta3GnTL1_like Beta 1 99.1 3E-09 6.5E-14 110.0 16.0 42 203-249 1-42 (219)
50 PLN02726 dolichyl-phosphate be 99.1 3.8E-09 8.2E-14 111.8 17.1 60 368-441 70-129 (243)
51 cd06423 CESA_like CESA_like is 99.0 2.9E-09 6.2E-14 102.0 13.6 64 368-445 55-119 (180)
52 cd04185 GT_2_like_b Subfamily 99.0 8.2E-09 1.8E-13 105.0 16.1 56 382-444 62-117 (202)
53 cd02526 GT2_RfbF_like RfbF is 99.0 3.3E-09 7.1E-14 110.2 13.4 66 368-445 49-118 (237)
54 cd06442 DPM1_like DPM1_like re 99.0 9.2E-09 2E-13 105.7 15.8 61 368-442 55-115 (224)
55 PF00535 Glycos_transf_2: Glyc 99.0 8.2E-10 1.8E-14 106.0 5.9 111 367-489 54-166 (169)
56 PRK10073 putative glycosyl tra 98.8 1.3E-07 2.8E-12 105.7 17.2 110 197-429 4-113 (328)
57 cd04188 DPG_synthase DPG_synth 98.7 1.4E-07 3E-12 97.2 13.9 53 382-443 68-120 (211)
58 PRK10018 putative glycosyl tra 98.7 4.3E-07 9.4E-12 99.6 17.2 52 367-428 61-112 (279)
59 TIGR01556 rhamnosyltran L-rham 98.7 5.5E-07 1.2E-11 97.3 16.7 69 367-445 46-114 (281)
60 cd04179 DPM_DPG-synthase_like 98.7 1.2E-07 2.6E-12 94.4 10.6 65 368-446 56-120 (185)
61 PRK10063 putative glycosyl tra 98.6 9.1E-07 2E-11 95.1 16.7 48 199-250 1-49 (248)
62 PF10111 Glyco_tranf_2_2: Glyc 98.6 1.1E-06 2.4E-11 95.9 16.0 63 382-450 74-136 (281)
63 cd00761 Glyco_tranf_GTA_type G 98.5 1.8E-06 3.8E-11 80.7 13.2 52 381-441 62-114 (156)
64 cd04187 DPM1_like_bac Bacteria 98.4 1.2E-06 2.5E-11 87.9 10.7 104 368-489 57-160 (181)
65 PTZ00260 dolichyl-phosphate be 98.3 9E-06 1.9E-10 91.3 15.6 42 382-428 148-189 (333)
66 KOG2571 Chitin synthase/hyalur 98.3 9.9E-06 2.2E-10 99.1 14.9 48 621-670 549-596 (862)
67 PRK13915 putative glucosyl-3-p 98.2 7.1E-06 1.5E-10 91.2 11.4 52 381-440 100-152 (306)
68 COG1216 Predicted glycosyltran 98.2 4.9E-05 1.1E-09 83.9 16.9 68 367-446 57-126 (305)
69 PRK10714 undecaprenyl phosphat 97.6 0.00053 1.1E-08 76.9 11.8 41 382-427 76-116 (325)
70 KOG2547 Ceramide glucosyltrans 97.4 0.0021 4.5E-08 72.4 13.9 159 381-669 155-314 (431)
71 cd02511 Beta4Glucosyltransfera 97.3 0.0019 4.1E-08 68.1 11.1 43 382-429 57-99 (229)
72 COG0463 WcaA Glycosyltransfera 97.3 0.0018 4E-08 61.4 9.9 46 198-249 2-47 (291)
73 cd02514 GT13_GLCNAC-TI GT13_GL 95.9 0.083 1.8E-06 60.0 12.6 41 202-246 3-43 (334)
74 KOG2978 Dolichol-phosphate man 93.0 0.49 1.1E-05 49.6 8.9 53 367-429 64-116 (238)
75 PF02364 Glucan_synthase: 1,3- 92.0 1 2.2E-05 56.3 11.4 101 564-699 381-482 (817)
76 KOG2977 Glycosyltransferase [G 83.1 16 0.00035 40.9 12.4 42 382-427 143-186 (323)
77 PF13712 Glyco_tranf_2_5: Glyc 73.1 11 0.00024 40.2 7.6 50 381-438 39-89 (217)
78 KOG3737 Predicted polypeptide 63.3 27 0.00059 40.6 8.2 48 194-244 150-197 (603)
79 PRK14503 mannosyl-3-phosphogly 56.9 22 0.00047 41.1 6.1 41 381-424 142-182 (393)
80 PF13704 Glyco_tranf_2_4: Glyc 56.1 33 0.00073 31.1 6.3 28 383-413 57-84 (97)
81 TIGR02460 osmo_MPGsynth mannos 51.0 65 0.0014 37.2 8.5 41 381-424 141-181 (381)
82 KOG3736 Polypeptide N-acetylga 38.3 39 0.00084 41.5 4.7 50 194-246 137-186 (578)
83 PF09623 Cas_NE0113: CRISPR-as 36.7 2.6E+02 0.0057 30.5 10.2 60 203-271 4-63 (224)
84 PF09488 Osmo_MPGsynth: Mannos 36.6 38 0.00082 39.2 4.0 40 381-423 141-180 (381)
85 COG4707 Uncharacterized protei 36.5 13 0.00028 35.1 0.3 43 303-356 20-69 (107)
86 PF07851 TMPIT: TMPIT-like pro 35.8 7.5E+02 0.016 28.7 14.3 18 756-773 173-190 (330)
87 COG4858 Uncharacterized membra 35.5 1.8E+02 0.004 31.0 8.3 64 823-886 96-162 (226)
88 KOG0916 1,3-beta-glucan syntha 34.5 8.8E+02 0.019 33.3 15.6 84 621-710 1173-1258(1679)
89 PF03452 Anp1: Anp1; InterPro 33.8 7.3E+02 0.016 27.9 13.2 43 196-242 22-65 (269)
90 KOG2442 Uncharacterized conser 32.9 2.5E+02 0.0055 33.9 9.9 78 825-913 311-390 (541)
91 PRK14502 bifunctional mannosyl 32.7 1.6E+02 0.0035 37.1 8.7 41 381-424 146-186 (694)
92 PF13896 Glyco_transf_49: Glyc 30.7 54 0.0012 37.2 4.1 60 176-246 10-71 (317)
93 PF15050 SCIMP: SCIMP protein 25.5 75 0.0016 31.4 3.4 41 764-805 2-47 (133)
94 COG4818 Predicted membrane pro 24.7 6.4E+02 0.014 24.3 9.5 26 774-799 5-30 (105)
95 PF02709 Glyco_transf_7C: N-te 24.2 35 0.00076 30.9 0.9 49 565-643 18-66 (78)
96 PRK09382 ispDF bifunctional 2- 23.3 1.6E+02 0.0035 34.3 6.3 28 400-427 95-122 (378)
97 PF11712 Vma12: Endoplasmic re 20.7 3.4E+02 0.0074 27.1 7.2 19 55-73 21-39 (142)
98 KOG3738 Predicted polypeptide 20.7 1.3E+02 0.0027 35.6 4.5 50 196-248 121-170 (559)
No 1
>PLN02436 cellulose synthase A
Probab=100.00 E-value=8.3e-267 Score=2334.81 Aligned_cols=920 Identities=88% Similarity=1.488 Sum_probs=875.6
Q ss_pred CCCCCCcccccCCCCCCCcccccCCCCCCCCCCCCCCCCCCccccccCCCchhHHHhHHHHHHhhhhhhhhhcccCCCCC
Q 002425 5 GISSDKHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGG 84 (924)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (924)
++++++|++++|+..|.||||||+||.+++.+.++|+|||+||+++||||||+||||||+||+||+++++++.+..+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wkerv~~wk~kq~~~~~~~~~~~~~~~ 250 (1094)
T PLN02436 171 EISSDRHALIVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQNEKLQVVKHEGGNDG 250 (1094)
T ss_pred ccCCcccccccCCcccccccccccccccccccCCCccCCccccccccccCcHHHHHHHHHHHhhhhhccccccccccccc
Confidence 34457788888998888999999999999999999999999999999999999999999999999866555555433224
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCceeeeecCCCccchhHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHH
Q 002425 85 GNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVS 164 (924)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~~~~wl~~~~~E~~~~~~ 164 (924)
|+.++++.+++|++++|++++||+||++++++.++|||++++++|+++++||+||++|++.+++|+|+++++||+||+|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~WFaf~ 330 (1094)
T PLN02436 251 GNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVS 330 (1094)
T ss_pred CCCCCCCCCCcccccccccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHH
Confidence 45543444578899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccchhhhHhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCC
Q 002425 165 WILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGA 244 (924)
Q Consensus 165 wil~~~~~w~pv~r~~~~~rL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~ 244 (924)
|+|+|++||+||+|+||+|||++||++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+
T Consensus 331 Wll~Q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGg 410 (1094)
T PLN02436 331 WILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGA 410 (1094)
T ss_pred HHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCc
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 002425 245 AMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVP 324 (924)
Q Consensus 245 ~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p 324 (924)
|+||||||.|||+|||+||||||||+|||||||+||+++.|+++++++|+|++|||+|||||||||+|||+|+++++++|
T Consensus 411 S~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp 490 (1094)
T PLN02436 411 AMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVP 490 (1094)
T ss_pred hHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred CCCcccCCCCCCCCCCcCCCccceeeeecCCCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEE
Q 002425 325 EDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYL 404 (924)
Q Consensus 325 ~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~i 404 (924)
|++|.|+||++|||+++||||+|||||++++|+.|.+|++||+|||||||||||++||+||||||+|+||||++||||||
T Consensus 491 ~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~I 570 (1094)
T PLN02436 491 EDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYL 570 (1094)
T ss_pred hhhhhhccCccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceE
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccccccccchhhhhhcccccccCCCccccccccchh
Q 002425 405 LNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFR 484 (924)
Q Consensus 405 l~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~R 484 (924)
||||||||+|||+++|+||||||||+.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+|+||||+||
T Consensus 571 LNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~fr 650 (1094)
T PLN02436 571 LNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFR 650 (1094)
T ss_pred EecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCC----cCCCcchhhhhhhhhhhhcccccccccccCCch
Q 002425 485 RQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSN----KKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQ 560 (924)
Q Consensus 485 R~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (924)
|+||||++||...+.+...++||+.||||||+.|+++++++++ .++.+...+++++++++++.+++++|++..+++
T Consensus 651 R~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1094)
T PLN02436 651 RQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQ 730 (1094)
T ss_pred eeeeeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 9999999999877766677889999999999988765433221 123345567889999999999999999999999
Q ss_pred hhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEE
Q 002425 561 IKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSV 640 (924)
Q Consensus 561 ~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~Gwrsv 640 (924)
++++++||+|++|++|+++++||.+.+.+.+++++||+||+||+||++|+||+||||.|+|+|||+.||++||++|||++
T Consensus 731 ~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSv 810 (1094)
T PLN02436 731 LKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSV 810 (1094)
T ss_pred hhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceE
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHH
Q 002425 641 YCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAI 720 (924)
Q Consensus 641 Y~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l 720 (924)
|++|+++||.|++|+|+.+++.||+|||+|++||++++++|+++|+.++|+++||++|+++++||++++++++|+++|++
T Consensus 811 Y~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l 890 (1094)
T PLN02436 811 YCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAI 890 (1094)
T ss_pred eCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988999999999999999999999999999999999998877899999999999999999999999999999999
Q ss_pred HHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeE
Q 002425 721 CLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFT 800 (924)
Q Consensus 721 ~Ll~G~~ivp~~s~~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~ 800 (924)
||++|++++|.++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++|+++++++|+|++++++|.
T Consensus 891 ~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~ 970 (1094)
T PLN02436 891 CLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFT 970 (1094)
T ss_pred HHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccce
Confidence 99999999999989888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcCCCCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 002425 801 VTSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQ 880 (924)
Q Consensus 801 VTpKg~~~~~~~~ly~f~ws~l~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~ 880 (924)
||+|..+++.++++|+|+|+++++|+++++++|++|+++|++++++++++.|+++++++|+++|+++|+|||++|||||+
T Consensus 971 VTsK~~d~~~~a~ly~f~~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr~ 1050 (1094)
T PLN02436 971 VTSKAADDGEFSELYLFKWTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQ 1050 (1094)
T ss_pred ecccccccccccceeeecceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999876667889999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHhhheeecCCCCCCCccccccCCCCC
Q 002425 881 DRLPTILLVWAILLASIFSLLWARVNPFVSKGDIVLEVCGLDCN 924 (924)
Q Consensus 881 ~r~P~~v~~~s~~l~~~f~~l~v~~~~~~~~~~~~~~~~~~~~~ 924 (924)
+|+||||++||++||++||||||+||||++++||++++||++|+
T Consensus 1051 ~r~P~~v~v~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~ 1094 (1094)
T PLN02436 1051 DRMPTIILVWSILLASILTLLWVRVNPFVSKGGPVLEICGLDCD 1094 (1094)
T ss_pred CCCCeeehHHHHHHHHHHHHHHeeeccccCCCCccccccCccCC
Confidence 99999999999999999999999999999999999999999996
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.1e-262 Score=2308.55 Aligned_cols=916 Identities=69% Similarity=1.247 Sum_probs=857.9
Q ss_pred CCCCCCCCcccccCCCC---CCCcccccCCCCCCCCCCCCCCCCCCccccccCCCchhHHHhHHHHHHhhhhhhhhhccc
Q 002425 3 DVGISSDKHALIIPPFM---GRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQ 79 (924)
Q Consensus 3 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (924)
|.+..+++|++++|++. |.||||||+||.|+.+|.++|+|||+||+++||||||+||||||+||+||+|++.++.+.
T Consensus 156 ei~~~~~~~~~~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~k~~~~~~~~ 235 (1085)
T PLN02400 156 EIPCATPDNQSVRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNK 235 (1085)
T ss_pred CCCCCCCccccccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHHHHhhhhhhccccccc
Confidence 34444445555667654 447999999999999999999999999999999999999999999999998765544433
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCcCCCCCceeeeecCCCccchhHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHH
Q 002425 80 G-GNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICE 158 (924)
Q Consensus 80 ~-~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~~~~wl~~~~~E 158 (924)
. ...||+.+|++++++|+++||++++||+||++++++.|++||++++++|+++++||+||++|++.+++|+|+++++||
T Consensus 236 ~~~~~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE 315 (1085)
T PLN02400 236 YHEGKGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICE 315 (1085)
T ss_pred cccccccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHH
Confidence 2 112334444445678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccccchhhhHhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEE
Q 002425 159 IWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACY 238 (924)
Q Consensus 159 ~~~~~~wil~~~~~w~pv~r~~~~~rL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~y 238 (924)
+||+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+||
T Consensus 316 ~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscY 395 (1085)
T PLN02400 316 IWFALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCY 395 (1085)
T ss_pred HHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEE
Confidence 99999999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred EcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 002425 239 VSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVA 318 (924)
Q Consensus 239 vsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~ 318 (924)
|||||+|+||||||.|||+|||+||||||||+|||||||+||+++.|+++++.+|+|++|||+|||+|||||+|||+|++
T Consensus 396 vSDDGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~ 475 (1085)
T PLN02400 396 VSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVA 475 (1085)
T ss_pred EecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccc
Q 002425 319 MAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVI 398 (924)
Q Consensus 319 ~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~ 398 (924)
+++++|+++|.|+||++|||+++||||+|||||++++|+.|.+|++||+|||||||||||++||+||||||+|+||||++
T Consensus 476 ~~~~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavm 555 (1085)
T PLN02400 476 KAQKIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVL 555 (1085)
T ss_pred hhccCCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhh
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccccccccchhhhhhcccccccCCCccccc
Q 002425 399 SNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVG 478 (924)
Q Consensus 399 tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~G 478 (924)
||||||||||||||+|||+++|+||||||||+.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+|+|
T Consensus 556 TNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvG 635 (1085)
T PLN02400 556 TNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVG 635 (1085)
T ss_pred cCCceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCC-------cCCCcchhhhhhhhhhhhcccccc
Q 002425 479 TGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSN-------KKNKDTSKQIYALENIEEGIEGID 551 (924)
Q Consensus 479 Tg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 551 (924)
|||+|||+||||++|+..+.+..... .||+||+.|+++++.+.+ .+..+++.++++++++++++++++
T Consensus 636 TGC~frR~aLYG~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1085)
T PLN02400 636 TGCCFNRQALYGYDPVLTEEDLEPNI-----IVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYD 710 (1085)
T ss_pred cCcceeeeeeccCCCccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999986544322211 235577766554322111 133456778999999999999999
Q ss_pred cccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHH
Q 002425 552 NEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFK 631 (924)
Q Consensus 552 ~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~r 631 (924)
++++.++++++++++||+|++|++|++++.||.+.+.+++++++||+||+||+||++|+||+||||.|+|+|||+.||++
T Consensus 711 ~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~ 790 (1085)
T PLN02400 711 DERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFK 790 (1085)
T ss_pred chhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHH
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHH
Q 002425 632 MHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPL 711 (924)
Q Consensus 632 L~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~ 711 (924)
||++||||+|++|++++|.|++|+|+.+++.||+|||+|++||+++++||+++|+.++|+++||++|+++++||++++++
T Consensus 791 LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~ 870 (1085)
T PLN02400 791 MHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPL 870 (1085)
T ss_pred HHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988889999999999999999999999999999999999998777899999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHH
Q 002425 712 IAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKV 791 (924)
Q Consensus 712 liylllP~l~Ll~G~~ivp~~s~~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~ 791 (924)
++|+++|++||++|++++|.++++++++|+++|+++++++++|++|+|+++++|||+||||+|.++|+++|+++++++|+
T Consensus 871 liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKv 950 (1085)
T PLN02400 871 LAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKV 950 (1085)
T ss_pred HHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHH
Confidence 99999999999999999999998888899999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEeCcCCCCC-CccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHH
Q 002425 792 VGGVNTNFTVTSKAADD-GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLY 870 (924)
Q Consensus 792 L~g~~~~F~VTpKg~~~-~~~~~ly~f~ws~l~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~ 870 (924)
|++++++|.||+|..++ +.+.++|+|+|+++++|+++++++|++|+++|++++++++++.|+++++++|+++|+++|+|
T Consensus 951 Lgg~~~~F~VTsK~~d~~~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~ 1030 (1085)
T PLN02400 951 LAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLY 1030 (1085)
T ss_pred hcCCcccceecCCcccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999998864 45678999999999999999999999999999999998888899999999999999999999
Q ss_pred HHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC-CCc-cccccCCCC
Q 002425 871 PFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK-GDI-VLEVCGLDC 923 (924)
Q Consensus 871 p~l~aL~gR~~r~P~~v~~~s~~l~~~f~~l~v~~~~~~~~-~~~-~~~~~~~~~ 923 (924)
||++|||||++|+|+||++||++||++|+||||+||||+++ +|| .+++||++|
T Consensus 1031 Pf~kgL~gR~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~ 1085 (1085)
T PLN02400 1031 PFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFVSDTTKAAANGQCGVNC 1085 (1085)
T ss_pred HHHHHHhccCCCCceeHHHHHHHHHHHHHHHheeccccccCCCCchhHhhcCcCC
Confidence 99999999999999999999999999999999999999999 999 999999999
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=7.2e-256 Score=2249.23 Aligned_cols=904 Identities=71% Similarity=1.274 Sum_probs=839.5
Q ss_pred CcccccCCCCCCCcccccCCCCCCC-CCCCCCCCCCCccccccCCCchhHHHhHHHHHHhhhhhhhhhcccC----CCCC
Q 002425 10 KHALIIPPFMGRGKRIHPMSFPDGF-MTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQG----GNGG 84 (924)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 84 (924)
+|++++||.. .|||| ||+|+. .+.++|+|||+||+++||||||+||||||+||.||+|++.++.... +++|
T Consensus 158 ~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~wk~~~~k~~~~~~~~~~~~~~~~~ 233 (1079)
T PLN02638 158 ERLSMASPGA-GGKRI---PYASDVNQSPNIRVVDPVREFGSPGLGNVAWKERVDGWKMKQDKNTIPMSTGTAPSEGRGG 233 (1079)
T ss_pred ccccccCccc-cCCcc---cccccccccCCcccCCccccccccccccHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 4444466654 47998 888855 7899999999999999999999999999999999976654433321 2333
Q ss_pred CCCCCC-CCCCCCCCCCcCCCCCceeeeecCCCccchhHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHH
Q 002425 85 GNNDGD-GVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAV 163 (924)
Q Consensus 85 ~~~~~~-~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~~~~wl~~~~~E~~~~~ 163 (924)
|+.+++ +.+++|+|+++++++||+||++++++.|++||++++++|+++++||+||++|++.+++|+|+++++||+||+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~WFaf 313 (1079)
T PLN02638 234 GDIDASTDVLMDDALLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALWLISVICEIWFAL 313 (1079)
T ss_pred CCCCCccccccccccccccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 334322 2346899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccccccchhhhHhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCC
Q 002425 164 SWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDG 243 (924)
Q Consensus 164 ~wil~~~~~w~pv~r~~~~~rL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG 243 (924)
+|+|+|++||+||+|+||+|||++|+++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||
T Consensus 314 ~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDG 393 (1079)
T PLN02638 314 SWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDG 393 (1079)
T ss_pred HHHHhccccccccccccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCC
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred CchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 002425 244 AAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKV 323 (924)
Q Consensus 244 ~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~ 323 (924)
+|+||||||.|||+|||+||||||||+|||||||+||+++.|+++++.+|+|++|||+|||||||||+|||+++++++++
T Consensus 394 gS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~ 473 (1079)
T PLN02638 394 AAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKV 473 (1079)
T ss_pred chHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCCCCcCCCccceeeeecCCCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCE
Q 002425 324 PEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPY 403 (924)
Q Consensus 324 p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~ 403 (924)
|+++|.|+||++|||+++||||+||||+++++|+.|.+|++||+|||||||||||++||+||||||+|+||||++|||||
T Consensus 474 p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPf 553 (1079)
T PLN02638 474 PEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPF 553 (1079)
T ss_pred CCccccccCCccCCCCCCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccccccccchhhhhhcccccccCCCccccccccch
Q 002425 404 LLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVF 483 (924)
Q Consensus 404 il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~ 483 (924)
|||||||||+|||++||+||||||||+.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+||||||+|
T Consensus 554 ILNLDCDmYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~f 633 (1079)
T PLN02638 554 LLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVF 633 (1079)
T ss_pred EeecccCcccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccc-ccccC-----C--cCCCcchhhhhhhhhhhhcccc--cccc
Q 002425 484 RRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKS-KKGKS-----N--KKNKDTSKQIYALENIEEGIEG--IDNE 553 (924)
Q Consensus 484 RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~--~~~~ 553 (924)
||+||||++||...+.. .+..+++||+..+++ ++.++ + .++.....+++++++++++.++ ++++
T Consensus 634 RR~ALYG~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1079)
T PLN02638 634 NRTALYGYEPPIKPKHK------KPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDE 707 (1079)
T ss_pred eehhhcCcCCccccccc------ccccccccccccccccccccchhhccccccccccccccccccccccccccccccchh
Confidence 99999999998653221 122233455553332 22211 1 1233455677888888888776 5567
Q ss_pred cccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHH
Q 002425 554 KSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMH 633 (924)
Q Consensus 554 ~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~ 633 (924)
++.++++.+++++||+|++|++|++.+.+|.+...+++++++||++|+||+||++|+||+||||.|+|+|||+.||++||
T Consensus 708 ~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH 787 (1079)
T PLN02638 708 KSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMH 787 (1079)
T ss_pred hhhhhhhhhhhhhccccHHHHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHH
Confidence 88899999999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHH
Q 002425 634 CHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIA 713 (924)
Q Consensus 634 ~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~li 713 (924)
++||||+|++|+++||.|++|+|+.+++.||+|||+|++||++++++|+++|+.++|+++||++|+++++||++++++++
T Consensus 788 ~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~li 867 (1079)
T PLN02638 788 ARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLL 867 (1079)
T ss_pred cCCCcEEecCCCchHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888899999999999999999999999999999999999877789999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHc
Q 002425 714 YCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVG 793 (924)
Q Consensus 714 ylllP~l~Ll~G~~ivp~~s~~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~ 793 (924)
|+++|++||++|++++|.++++++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++|+++++++|+|+
T Consensus 868 Y~llP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lg 947 (1079)
T PLN02638 868 YCTLPAVCLLTGKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLA 947 (1079)
T ss_pred HHHHHHHHHHcCCccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHc
Confidence 99999999999999999998888889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEeCcCCCCC-CccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHH
Q 002425 794 GVNTNFTVTSKAADD-GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPF 872 (924)
Q Consensus 794 g~~~~F~VTpKg~~~-~~~~~ly~f~ws~l~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~ 872 (924)
+++++|.||+|..++ +.++++|+|+||++++|+++++++|++|+++|+++++++++..|+++++++|+++|+++|+|||
T Consensus 948 gs~~~F~VTsK~~d~~~~~~ely~f~wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf 1027 (1079)
T PLN02638 948 GIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPF 1027 (1079)
T ss_pred cCcccceeccccccccccccceeEecceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHH
Confidence 999999999998864 3568999999999999999999999999999999999888888999999999999999999999
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC-CCccccccCCCC
Q 002425 873 LKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK-GDIVLEVCGLDC 923 (924)
Q Consensus 873 l~aL~gR~~r~P~~v~~~s~~l~~~f~~l~v~~~~~~~~-~~~~~~~~~~~~ 923 (924)
++|||||++|+||||++||++|+++|+||||+||||+++ +||.+++||++|
T Consensus 1028 ~kgl~gR~~r~P~~v~v~s~ll~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~ 1079 (1079)
T PLN02638 1028 LKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1079 (1079)
T ss_pred HHHHhccCCCCCeeehHHHHHHHHHHHHHHheecccccCCCCchhhccCcCC
Confidence 999999999999999999999999999999999999999 999999999999
No 4
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=6.9e-254 Score=2227.44 Aligned_cols=877 Identities=71% Similarity=1.329 Sum_probs=831.5
Q ss_pred CCCCCCCCCccccccCCCchhHHHhHHHHHHhhhhhhhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCceeeeecCCC
Q 002425 37 LPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSS 116 (924)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~ 116 (924)
+.-++|||+|| |||||+||||||+||+||+ +++.+.++.+ +.+++ .+++|.|+|+++++||+||++++++
T Consensus 135 ~~~~~~~~~~~----~~g~~~wk~r~~~wk~~~~-~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~pL~~~~~i~~~ 204 (1044)
T PLN02915 135 VAGKDLEAERE----GYGNAEWKDRVDKWKTRQE-KRGLVNKDDS----DDGDD-KGDEEEYLLAEARQPLWRKVPIPSS 204 (1044)
T ss_pred cCCCCcCcccc----CcCCHHHHHHHHHHHhhhh-hhcccccccc----CCCCC-CCCcccccccccCCCceEEEecCcc
Confidence 44578999999 9999999999999999996 5544444322 12222 2368899999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHhhhhhhcCCCCC
Q 002425 117 KISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPS 196 (924)
Q Consensus 117 ~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~~~~rL~~r~~~~~~~~ 196 (924)
.|+|||++++++|+++++||+||++|++.+++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++||+++++++
T Consensus 205 ~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~e~~~~~~ 284 (1044)
T PLN02915 205 KINPYRIVIVLRLVILCFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEPN 284 (1044)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCcCCCchHHHHHHHHHHHHHHHHHHHccCccccccccccCHHHHHHHhccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCc
Q 002425 197 DLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAP 276 (924)
Q Consensus 197 ~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraP 276 (924)
+||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||+||||||
T Consensus 285 ~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaP 364 (1044)
T PLN02915 285 RLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHNIEPRAP 364 (1044)
T ss_pred cCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHHhhcchhhhcCCCcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCC
Q 002425 277 EWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNG 356 (924)
Q Consensus 277 e~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g 356 (924)
|+||+++.|+++++++|+|++|||+|||||||||+|||+|+++++++|+++|.|+|||+|||+++||||+|||||++++|
T Consensus 365 e~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~ 444 (1044)
T PLN02915 365 EFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEG 444 (1044)
T ss_pred HHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCCCCCCccceEEeecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceE
Q 002425 357 VRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKIC 436 (924)
Q Consensus 357 ~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va 436 (924)
+.|.+|++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|+++|
T Consensus 445 ~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~a 524 (1044)
T PLN02915 445 ALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLC 524 (1044)
T ss_pred CcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecCCCCCeeE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccc
Q 002425 437 YVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCR 516 (924)
Q Consensus 437 ~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~ 516 (924)
||||||+|||+|++|||+|++++|||++|+|+||+|||+|+||||+|||+||||++||..++.+..+++||+.||||||+
T Consensus 525 fVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~ 604 (1044)
T PLN02915 525 YVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCG 604 (1044)
T ss_pred EEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998877788889999999999998
Q ss_pred cccccccccCC-----------------------------cCCCcchhhhhhhhhhhhccccccc-ccccCCchhhHhhh
Q 002425 517 SRKKSKKGKSN-----------------------------KKNKDTSKQIYALENIEEGIEGIDN-EKSSLMPQIKFEKK 566 (924)
Q Consensus 517 ~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 566 (924)
.++++++..++ +...+++.++++++++++++|++++ |+++++++++++++
T Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1044)
T PLN02915 605 GGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYDELEKSSLMSQKNFEKR 684 (1044)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhh
Confidence 77765432111 0122356678999999999999876 88889999999999
Q ss_pred cCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCC
Q 002425 567 FGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR 646 (924)
Q Consensus 567 fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~ 646 (924)
||+|++|++|++.+.+|.+.+.+.+++++||+||+||+||++|+||+||||.|+|+|||+.||++||++|||++|++|++
T Consensus 685 fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~p~r 764 (1044)
T PLN02915 685 FGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKR 764 (1044)
T ss_pred cCCcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHHHHHHHccCCcEEeeCCCc
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999999988
Q ss_pred CccccCCCCCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCC
Q 002425 647 PAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGK 726 (924)
Q Consensus 647 ~af~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~ 726 (924)
++|.|++|+|+.++++||+|||+|++||++++++|+++++.++|+++||++|+++++||++++++++|+++|++||++|+
T Consensus 765 ~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~slp~liY~llP~l~LLtG~ 844 (1044)
T PLN02915 765 PAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGK 844 (1044)
T ss_pred HHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999999999999999999999998767899999999999999999999999999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCC
Q 002425 727 FIVPEISNYASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAA 806 (924)
Q Consensus 727 ~ivp~~s~~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~ 806 (924)
+++|.++...+++|+++|++++++++++++|+|+++++|||+||||+|.++++++|+++++++|+|++++++|+||+|+.
T Consensus 845 ~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLg~se~~F~VTsK~~ 924 (1044)
T PLN02915 845 FIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAA 924 (1044)
T ss_pred cccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccCCcceecCCcc
Confidence 99998877777888999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC--ccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 002425 807 DDG--EFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLP 884 (924)
Q Consensus 807 ~~~--~~~~ly~f~ws~l~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~~r~P 884 (924)
+++ +++++|+|+|+++++|+++++++|++|+++|++++++++++.|+.+++++++++|+++|+|||++|||||++|+|
T Consensus 925 d~~~d~~~ely~F~~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~~~l~~~~wvvv~lyPf~kgLmgR~~r~P 1004 (1044)
T PLN02915 925 DDEADEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTP 1004 (1044)
T ss_pred ccchhhhccceeecceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 633 457899999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhheeecCCCCC-CCccccccCCCC
Q 002425 885 TILLVWAILLASIFSLLWARVNPFVSK-GDIVLEVCGLDC 923 (924)
Q Consensus 885 ~~v~~~s~~l~~~f~~l~v~~~~~~~~-~~~~~~~~~~~~ 923 (924)
|||++||++||++|++|||+||||+++ +||.+++||++|
T Consensus 1005 ~~v~v~s~lla~~~~ll~v~~~~~~~~~~~~~~~~~~~~~ 1044 (1044)
T PLN02915 1005 TIVVLWSILLASIFSLVWVRIDPFLPKQTGPILKQCGVEC 1044 (1044)
T ss_pred eeehHHHHHHHHHHHHHHheeccccCCCCCccccccCCCC
Confidence 999999999999999999999999999 999999999999
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=3.9e-245 Score=2151.86 Aligned_cols=869 Identities=70% Similarity=1.278 Sum_probs=809.4
Q ss_pred CcccccCCCCCCCcccccCCCCCCCCCCCCCCCCCCccccccCCCchhHHHhHHHHHHhhhhhhhhhcccCCCCCCCCCC
Q 002425 10 KHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDG 89 (924)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (924)
+|++++|+. .||+|||+||++ .++|+|||+||++ ||||||+||+||+ +.+ | +
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~--------wk~rv~~wk~~~~---------~~~--~--~- 221 (1040)
T PLN02189 170 HGEQMLSSS--LHKRVHPYPVSE----PGSAKWDEKKEGG--------WKERMDDWKMQQG---------NLG--P--D- 221 (1040)
T ss_pred ccccccCCc--ccCccCcccccC----CCcccCCcccccc--------HHHHHHHHHhhcc---------cCC--C--C-
Confidence 334456665 479999999988 4568999999975 9999999999995 110 1 1
Q ss_pred CCCCCCCCCCCcCCCCCceeeeecCCCccchhHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 002425 90 DGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQ 169 (924)
Q Consensus 90 ~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~~~~wl~~~~~E~~~~~~wil~~ 169 (924)
++.+++|+++++++++||+||++++++.+++||++++++|+++++||+||++|++.+++|+|+++++||+||+|+|+|+|
T Consensus 222 ~~~~~~d~~~~~~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W~~s~~~E~wFaf~Wll~q 301 (1040)
T PLN02189 222 PDDYDADMALIDEARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWILDQ 301 (1040)
T ss_pred CCCCchhhhhcccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCccchHHHHHHHHHHHHHHHHHHHcc
Confidence 23346788889999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred cccccccccchhhhHhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhH
Q 002425 170 FPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTF 249 (924)
Q Consensus 170 ~~~w~pv~r~~~~~rL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~ 249 (924)
++||+||+|+||+|||++|+++++++++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|+|||
T Consensus 302 ~~kw~Pv~R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf 381 (1040)
T PLN02189 302 FPKWFPIDRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTF 381 (1040)
T ss_pred CcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHH
Confidence 99999999999999999999988888999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 002425 250 EALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWT 329 (924)
Q Consensus 250 ~~l~E~~~FA~~WvpfCkk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~ 329 (924)
|||.|||+|||+||||||||||||||||+||+++.|+++++.+|+|++|||+|||||||||+|||+++++++++|+++|.
T Consensus 382 ~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~ 461 (1040)
T PLN02189 382 EALSETAEFARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWI 461 (1040)
T ss_pred HHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcCCCccceeeeecCCCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecC
Q 002425 330 MQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDC 409 (924)
Q Consensus 330 m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDa 409 (924)
|+||++|||++++|||+||||+++++|+.|.+|++||+|||||||||||++||+||||||+|+||||++|||||||||||
T Consensus 462 m~dGt~W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDC 541 (1040)
T PLN02189 462 MQDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDC 541 (1040)
T ss_pred eccCccCCCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccC
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhc
Q 002425 410 DHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALY 489 (924)
Q Consensus 410 D~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALy 489 (924)
|||+|||++||+||||||||+.|+++|||||||+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+|||
T Consensus 542 DmY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALy 621 (1040)
T PLN02189 542 DHYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALY 621 (1040)
T ss_pred ccccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCC
Q 002425 490 GYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQ 569 (924)
Q Consensus 490 G~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~ 569 (924)
|++|++..+.+..++ +||+||..++++++.+ .. .+ ...+++++++++++.++++++++++||+
T Consensus 622 G~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~fG~ 684 (1040)
T PLN02189 622 GYDPPKGPKRPKMVT-----CDCCPCFGRRKKKHAK-NG----LN-------GEVAALGGMESDKEMLMSQMNFEKKFGQ 684 (1040)
T ss_pred ccCcccccccccccc-----cchhhhcccccccccc-cc----cc-------cccccccccchhhhhhhhhhhhHhhhcc
Confidence 999876543333222 2234454443221111 00 00 0012344455666778899999999999
Q ss_pred cHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCcc
Q 002425 570 SPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAF 649 (924)
Q Consensus 570 s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af 649 (924)
|.+|++|++.+.+|.+..++.+++++||++|+||+||++|+|||||||.|+|+|||+.||++||++||||+|++|++++|
T Consensus 685 S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF 764 (1040)
T PLN02189 685 SAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAF 764 (1040)
T ss_pred chhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHh
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999999888999
Q ss_pred ccCCCCCHHHHHHHHHHHhhhhHHHHHhhccccccccC-CCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcc
Q 002425 650 KGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYG-CGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFI 728 (924)
Q Consensus 650 ~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~-~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~i 728 (924)
.|++|+|+.+++.||+|||+|++||+++++||+++|+. ++|+++||++|+++++||++++++++|+++|++||++|+++
T Consensus 765 ~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i 844 (1040)
T PLN02189 765 KGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFI 844 (1040)
T ss_pred cCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999998763 67999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCCC
Q 002425 729 VPEISNYASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADD 808 (924)
Q Consensus 729 vp~~s~~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~~ 808 (924)
+|.++++++++|+++|+.+++++++|++|+|+++++|||+||||+|.++++++|+++++++|+|++++++|.||+|..++
T Consensus 845 ~p~vs~~~~~~fi~lf~~~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d 924 (1040)
T PLN02189 845 MPPISTFASLFFIALFMSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDD 924 (1040)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHH
Q 002425 809 GEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILL 888 (924)
Q Consensus 809 ~~~~~ly~f~ws~l~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~~r~P~~v~ 888 (924)
+.++++|+|+|+++++|+++++++|++|+++|+++++++++..|+++++++++++|+++|+|||++|||||++|+||||+
T Consensus 925 ~~~~~ly~f~~s~l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~ 1004 (1040)
T PLN02189 925 DEFGELYAFKWTTLLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV 1004 (1040)
T ss_pred cccccceeecceeHhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeh
Confidence 77889999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhheeecCCCCC-CCccccccCCCC
Q 002425 889 VWAILLASIFSLLWARVNPFVSK-GDIVLEVCGLDC 923 (924)
Q Consensus 889 ~~s~~l~~~f~~l~v~~~~~~~~-~~~~~~~~~~~~ 923 (924)
+||++|+++|++|||+||||+++ +||.+++||++|
T Consensus 1005 v~s~ll~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~ 1040 (1040)
T PLN02189 1005 IWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGINC 1040 (1040)
T ss_pred HHHHHHHHHHHHHHheecccccCCCCchhhccCcCC
Confidence 99999999999999999999999 999999999999
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=3.8e-243 Score=2126.02 Aligned_cols=862 Identities=69% Similarity=1.277 Sum_probs=801.0
Q ss_pred CCCchhHHHhHHHHHHhhhhhhhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCceeeeecCCCccchhHHHHHHHHHH
Q 002425 52 GYGTVAWKERMEEWKKKQNEKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVI 131 (924)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~ 131 (924)
+|||++||||||+||.||+|++..+..... ..|+.+ ++..++|+|+ ||.++||+||++++++.++|||+++++++++
T Consensus 108 ~~~~~~wk~r~~~wk~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~-~~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~ 184 (977)
T PLN02195 108 EYGNPIWKNRVESWKDKKNKKKKSAKKKEA-HKAQIP-PEQQMEEKPS-ADAYEPLSRVIPIPRNKLTPYRAVIIMRLII 184 (977)
T ss_pred ccCCHHHHHHHHHHHHhhhhhccccccccc-cccCCC-CccCCccccc-ccccCCceEEEecCcccchhHHHHHHHHHHH
Confidence 499999999999999999866554443332 112333 2344678886 9999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHhhhhhhcCCCCCCCCceeEEEecCCCC
Q 002425 132 LGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPM 211 (924)
Q Consensus 132 ~~~yl~wRi~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~~~~rL~~r~~~~~~~~~lp~VDvfV~t~dp~ 211 (924)
+++||+||++|++++++|+|+++++||+||+|+|+|+|++||+||+|+||+|||++|+++++++++||+|||||||+||.
T Consensus 185 l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~ 264 (977)
T PLN02195 185 LGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRETYIDRLSARYEREGEPSQLAAVDFFVSTVDPL 264 (977)
T ss_pred HHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHhcccccccccceECHHHHHHHhccCCCcccCCceeeEeccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred CCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCC
Q 002425 212 KEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKV 291 (924)
Q Consensus 212 kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~yF~~~~~~~~~~~ 291 (924)
||||++|+|||||+||+|||+|||+|||||||+|+||||||.|||+|||+||||||||||||||||+||+++.|+++++.
T Consensus 265 kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~ 344 (977)
T PLN02195 265 KEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKV 344 (977)
T ss_pred cCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhccCCCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcccccCCccCcEEEE
Q 002425 292 NPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYV 371 (924)
Q Consensus 292 ~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~~~~~lP~lvYv 371 (924)
+|+|++|||+|||||||||+|||+++++++++|+++|.|+||++|||+++||||+||||+++++|+.|.+|++||+||||
T Consensus 345 ~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYV 424 (977)
T PLN02195 345 QPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGARDIEGNELPRLVYV 424 (977)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCcccccccCceeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred ecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccc
Q 002425 372 SREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHD 451 (924)
Q Consensus 372 sRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d 451 (924)
|||||||++||+||||||+++||||++||||||||||||||+|||++||+|||||+||+.|+++|||||||+|||+|++|
T Consensus 425 SREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D 504 (977)
T PLN02195 425 SREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSD 504 (977)
T ss_pred eccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccccccc----CC
Q 002425 452 RYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGK----SN 527 (924)
Q Consensus 452 ~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~----~~ 527 (924)
+|+|++++|||++|+|+||+|||+||||||+|||+||||++|+..++.+..++.+| || ||+.+++..... +.
T Consensus 505 ~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~ 580 (977)
T PLN02195 505 RYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLPKSSSSSS---SC-CCPTKKKPEQDPSEIYRD 580 (977)
T ss_pred CCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccccccccccccccc---cc-cccccccccccchhhccc
Confidence 99999999999999999999999999999999999999999887654444444444 44 455433322111 11
Q ss_pred cCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhcccccc
Q 002425 528 KKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYED 607 (924)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~ 607 (924)
.++.+.+..+.+++++++ ..+++++.++++++++++||+|++|++|++.+.+|.+...+.+++++||++|+||+||+
T Consensus 581 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 657 (977)
T PLN02195 581 AKREDLNAAIFNLREIDN---YDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEE 657 (977)
T ss_pred cccccccccccccccccc---cchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHhhhcccCcc
Confidence 122333444555554432 12346778899999999999999999999999999999888899999999999999999
Q ss_pred ccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHHhhccccccccC
Q 002425 608 KTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYG 687 (924)
Q Consensus 608 ~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~ 687 (924)
+|+|||||||.|+|+|||+.||++||++||||+|++|.+++|.|++|+|+.+++.||+|||+|++|+++++++|+++|+.
T Consensus 658 ~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~ 737 (977)
T PLN02195 658 KTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYG 737 (977)
T ss_pred ccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchhhhhhccCCccccccC
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999998753
Q ss_pred -CCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhhccCccccccc
Q 002425 688 -CGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIHDWW 766 (924)
Q Consensus 688 -~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wW 766 (924)
++|+++||++|+++++||++++++++|+++|++||++|++++|.++.+++++|+++|+++++++++|++|+|.++++||
T Consensus 738 ~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WW 817 (977)
T PLN02195 738 GGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLW 817 (977)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHh
Confidence 7899999999999999999999999999999999999999999998888889999999999999999999999999999
Q ss_pred cchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHhh
Q 002425 767 RNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAIS 846 (924)
Q Consensus 767 r~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~l~iP~~~Llllnlvaiv~gi~~~i~ 846 (924)
||||||+|.++++++|+++++++|+|++++++|.||+|..++++++++|+|+||++++|+++++++|++|+++|++++++
T Consensus 818 rnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~~~~~Y~f~~S~l~iP~ttl~ilNlvaiv~g~~~~i~ 897 (977)
T PLN02195 818 RNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTEFGELYMVKWTTLLIPPTSLLIINLVGVVAGFSDALN 897 (977)
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccchhcceeccceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988778889999999999999999999999999999999998
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC-CCcc-cccc-CCCC
Q 002425 847 NGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK-GDIV-LEVC-GLDC 923 (924)
Q Consensus 847 ~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~~r~P~~v~~~s~~l~~~f~~l~v~~~~~~~~-~~~~-~~~~-~~~~ 923 (924)
++++.|+++++++++++|+++|+|||++|||||++|+||||++||++|+++||+|||+||||+++ +||. +++| |++|
T Consensus 898 ~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~~r~P~~v~v~s~ll~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~ 977 (977)
T PLN02195 898 KGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVGKTDTTTLSNNCISIDC 977 (977)
T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHeeccccccCCCCCchhhccCCCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999 9999 9999 9999
No 7
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=1.6e-218 Score=1925.87 Aligned_cols=784 Identities=55% Similarity=1.017 Sum_probs=706.9
Q ss_pred CCcCCCCCceeeeecCCCccchhHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 002425 99 MMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVR 178 (924)
Q Consensus 99 ~~~~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r 178 (924)
+||++++||+||++++++.+++||++++++|+++++||+||++|++.++.|+|+++++||+||+|+|+|+|++||+||+|
T Consensus 262 ~~~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R 341 (1135)
T PLN02248 262 FMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINR 341 (1135)
T ss_pred ccccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 58999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred chhhhHhhhhhhcCCC-----CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhh
Q 002425 179 ETYLDRLSLRYEKEGK-----PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS 253 (924)
Q Consensus 179 ~~~~~rL~~r~~~~~~-----~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~ 253 (924)
.||+|||++|++.|++ +++||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+++||||||.
T Consensus 342 ~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~ 421 (1135)
T PLN02248 342 ATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMA 421 (1135)
T ss_pred ccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHH
Confidence 9999999999986543 57899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhhHhHHHhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh--------------
Q 002425 254 ETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAM-------------- 319 (924)
Q Consensus 254 E~~~FA~~WvpfCkk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~-------------- 319 (924)
|||+|||+||||||||+|||||||+||+++.|+++++.+|+|++|||+|||||||||+|||+|++.
T Consensus 422 EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~ 501 (1135)
T PLN02248 422 EAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEI 501 (1135)
T ss_pred HHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999641
Q ss_pred ----------------hccCCCCCcccCCCCCCCCC--------CcCCCccceeeeecCCC------------cccc--c
Q 002425 320 ----------------AQKVPEDGWTMQDGTPWPGN--------NVRDHPGMIQVFLGQNG------------VRDI--E 361 (924)
Q Consensus 320 ----------------~~~~p~~~w~m~dg~~w~~~--------~~rdhp~~iqv~~~~~g------------~~d~--~ 361 (924)
.+++|+++| |+|||+|||+ +++|||+||||++++++ ..|. .
T Consensus 502 ~~~~~~~~~~~~~~~e~~~~~~~~w-m~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~ 580 (1135)
T PLN02248 502 KAKKKQRESGGGDPSEPLKVPKATW-MADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDV 580 (1135)
T ss_pred Hhhhhhhhhccccccccccccccee-eccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccc
Confidence 245788899 9999999997 46799999999998644 1122 2
Q ss_pred CCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecC
Q 002425 362 GNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFP 441 (924)
Q Consensus 362 ~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~P 441 (924)
+++||+|||||||||||++||+||||||+|+||||++||||||||||||||+|||++||+||||||||+ |+++||||||
T Consensus 581 d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFP 659 (1135)
T PLN02248 581 DIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFP 659 (1135)
T ss_pred ccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCC
Confidence 458999999999999999999999999999999999999999999999999999999999999999997 9999999999
Q ss_pred ceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccc
Q 002425 442 QRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKS 521 (924)
Q Consensus 442 Q~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 521 (924)
|+|||+|++|||+|++++|||++|+|+||+|||+||||||+|||+||||++|+..+.. +++|++||+.++++
T Consensus 660 QrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~--------~~~~~~~~~~~~~~ 731 (1135)
T PLN02248 660 QRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEH--------SGCFGSCKFTKKKK 731 (1135)
T ss_pred cccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccc--------cccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999764321 12345566544332
Q ss_pred ccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhh---------CCCCC------
Q 002425 522 KKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEA---------GGVPT------ 586 (924)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~---------Gg~~~------ 586 (924)
++.+... ... +++++ ++. .++.+.++++||+|..|++|+.... ++.+.
T Consensus 732 ~~~~~~~-----~~~---~~~~~-------~~~--~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~ 794 (1135)
T PLN02248 732 KETSASE-----PEE---QPDLE-------DDD--DLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGA 794 (1135)
T ss_pred ccccccc-----ccc---ccccc-------ccc--hhhhhhhhhhhccchhhhhhhHHHhhccccccccccccccccccc
Confidence 2111000 000 11111 011 1346678899999999999986432 22211
Q ss_pred -----CCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHH
Q 002425 587 -----GASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRL 661 (924)
Q Consensus 587 -----~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l 661 (924)
....+++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|++.+|.|++|+|+.+++
T Consensus 795 ~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L 874 (1135)
T PLN02248 795 LTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRL 874 (1135)
T ss_pred ccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHH
Confidence 123467899999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred HHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHH
Q 002425 662 HQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFM 741 (924)
Q Consensus 662 ~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~~~~~~fi 741 (924)
+||+|||+|++||++++++|++. .++|+++||++|+++++||++++++++|+++|++||++|++++|+.+..++++++
T Consensus 875 ~Qr~RWA~G~lQIf~sr~~Pll~--~~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~yll 952 (1135)
T PLN02248 875 HQVLRWATGSVEIFFSRNNALLA--SRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLL 952 (1135)
T ss_pred HHHHHHhhchHHHHhccCCcccc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHH
Confidence 99999999999999999999884 4789999999999999999999999999999999999999999987554444444
Q ss_pred HHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCCCC---ccccccccc
Q 002425 742 ALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDG---EFSDLYLFK 818 (924)
Q Consensus 742 ~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~~~---~~~~ly~f~ 818 (924)
.+++.++++.+++++|+|+++++|||+||||+|.++++++++++++++|+|++++++|.||+|..+++ +++++|+|+
T Consensus 953 ~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~a~ly~f~ 1032 (1135)
T PLN02248 953 IITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFADLYIVK 1032 (1135)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccccccccchheecC
Confidence 56678889999999999999999999999999999999999999999999999999999999987643 467899999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q 002425 819 WTSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIF 898 (924)
Q Consensus 819 ws~l~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~~r~P~~v~~~s~~l~~~f 898 (924)
|+++++|+++++++|++|+++|+++++.++++.|+.+++++|+++|+++|+|||++|||||++|+||||++||++|++++
T Consensus 1033 wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~gr~P~iv~v~s~ll~~~~ 1112 (1135)
T PLN02248 1033 WTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSITI 1112 (1135)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeehHHHHHHHHHHH
Confidence 99999999999999999999999999887777788999999999999999999999999999999999999999999999
Q ss_pred HhhheeecCCCCC
Q 002425 899 SLLWARVNPFVSK 911 (924)
Q Consensus 899 ~~l~v~~~~~~~~ 911 (924)
+||||+|+||...
T Consensus 1113 sll~v~~~~~~~~ 1125 (1135)
T PLN02248 1113 SLLWVAISPPSGA 1125 (1135)
T ss_pred HHHheEeccccCc
Confidence 9999999999854
No 8
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.6e-213 Score=1838.82 Aligned_cols=713 Identities=68% Similarity=1.251 Sum_probs=683.8
Q ss_pred eeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhhh
Q 002425 201 IDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYF 280 (924)
Q Consensus 201 VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~yF 280 (924)
|||||||+||.||||++|+|||||+||+|||+|||+|||||||++++|||||.|||+|||+||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcccc
Q 002425 281 AQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDI 360 (924)
Q Consensus 281 ~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~ 360 (924)
+++.|+++++.+|+|++||++|||+|||||+|||+++++.+++|+++|+|+||++|||++++|||+||||+++++++.|.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~~~ 160 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGKDV 160 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEec
Q 002425 361 EGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQF 440 (924)
Q Consensus 361 ~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~ 440 (924)
+|++||+||||||||||+++||+||||||+|+||||++||||||||||||||+|||+++|+||||||||+.|+++|||||
T Consensus 161 ~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQf 240 (720)
T PF03552_consen 161 DGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQF 240 (720)
T ss_pred ccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccc
Q 002425 441 PQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK 520 (924)
Q Consensus 441 PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~ 520 (924)
||+|+|+|++|+|+|++++||+++|+|+||+|||+||||||+|||+||||++|+..++..+.++ .+|+||++.+++
T Consensus 241 pq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~----~~~~~c~~~~k~ 316 (720)
T PF03552_consen 241 PQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTC----CCCSCCFGRRKK 316 (720)
T ss_pred CceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcce----eeeecccCCccc
Confidence 9999999999999999999999999999999999999999999999999999998777665544 234444454444
Q ss_pred cccccCC----cCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHH
Q 002425 521 SKKGKSN----KKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNE 596 (924)
Q Consensus 521 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~e 596 (924)
++++++. .++.+.+.+++++++++|+.++.+++++..+++++++++||+|++|++|+..+.|+.+.+.+++++++|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~E 396 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEE 396 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHH
Confidence 3333222 146778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHH
Q 002425 597 AIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILL 676 (924)
Q Consensus 597 a~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~ 676 (924)
|+||+||+||++|+|||||||.|+++|||+.||++||++||||+||+|+++||.|.||+|+.+.+.|++|||.|++||++
T Consensus 397 A~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~f 476 (720)
T PF03552_consen 397 AIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFF 476 (720)
T ss_pred HHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 002425 677 SRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQ 756 (924)
Q Consensus 677 ~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~~~~~~fi~lfls~~~~~lLe~r 756 (924)
+|+||+|+|+.++|+++||++|++.++|+++|+|.++|+++|++||++|++++|++++.++++|+++|+++++++++|++
T Consensus 477 Sr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~ 556 (720)
T PF03552_consen 477 SRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFR 556 (720)
T ss_pred hcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999877899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCC--CCccccccccccccchhhHHHHHHHHH
Q 002425 757 WGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAAD--DGEFSDLYLFKWTSLLIPPLTLLVFNL 834 (924)
Q Consensus 757 wsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~--~~~~~~ly~f~ws~l~iP~~~Llllnl 834 (924)
|+|+++++|||+||||+|.++++|+||++++++|+|++++++|.||+|..+ ++++.++|.|+|+++++|+++|+++|+
T Consensus 557 wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~ely~f~wS~LfiP~tTllilNL 636 (720)
T PF03552_consen 557 WSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYAELYIFKWSPLFIPPTTLLILNL 636 (720)
T ss_pred hccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccccccccccccccchhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987 445678999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHhhheeecCCCCC-CC
Q 002425 835 IGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILLASIFSLLWARVNPFVSK-GD 913 (924)
Q Consensus 835 vaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~~r~P~~v~~~s~~l~~~f~~l~v~~~~~~~~-~~ 913 (924)
+|+++|+++++++++++|+++++++|+++|+++|+|||++|||||++|+||||++||++||++|++|||+||||++| +|
T Consensus 637 va~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~r~P~~v~v~S~lla~i~~llwv~i~~~~~~~~~ 716 (720)
T PF03552_consen 637 VAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKDRIPTSVIVWSVLLASIFSLLWVRIDPFLAKTTG 716 (720)
T ss_pred HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccCCcceeehHHHHHHHHHHHHHheecccCcCCCCC
Confidence 99999999999988889999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cccc
Q 002425 914 IVLE 917 (924)
Q Consensus 914 ~~~~ 917 (924)
|+++
T Consensus 717 ~~~~ 720 (720)
T PF03552_consen 717 PDLK 720 (720)
T ss_pred CCCC
Confidence 9875
No 9
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.2e-195 Score=1692.25 Aligned_cols=725 Identities=34% Similarity=0.609 Sum_probs=656.0
Q ss_pred CCCCceeeeecCCCccchhHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhh
Q 002425 103 GRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYL 182 (924)
Q Consensus 103 ~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~~~ 182 (924)
+..||+++++++++. ||++.++++++++.|++||++++++++ ++|+.+++||+||+++|+|+|++||+|++|.|+|
T Consensus 7 ~~~pL~~~~~~~~~~---~r~~~~~vl~~~~~~l~~R~~~~~~~~-~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~~p 82 (756)
T PLN02190 7 SLPPLCERISHKSYF---LRAVDLTILGLLFSLLLYRILHMSEND-TVWLVAFLCESCFSFVWLLITCIKWSPAEYKPYP 82 (756)
T ss_pred CCCCceeeeeccchh---HHHHHHHHHHHHHHHHHHHHhCCCccc-HHHHHHHHHHHHHHHHHHHhccceeeecCCCCCc
Confidence 446999999999984 999999999999999999999999887 6899999999999999999999999999999999
Q ss_pred hHhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhh
Q 002425 183 DRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKW 262 (924)
Q Consensus 183 ~rL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~W 262 (924)
|||++|++ +||+|||||||+||.||||++|+|||||+||+|||+|||+|||||||+|++|||||.|||+|||+|
T Consensus 83 ~~l~~r~~------~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~W 156 (756)
T PLN02190 83 DRLDERVH------DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIW 156 (756)
T ss_pred HHHHHhhc------cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhh
Confidence 99999983 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCC--CCCCCCC
Q 002425 263 VPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDG--TPWPGNN 340 (924)
Q Consensus 263 vpfCkk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg--~~w~~~~ 340 (924)
|||||||||||||||+||+++.+ .+.+++|++||++||+||||||+|||+.+ +...|.++|+ .+|++++
T Consensus 157 vPFCrK~~IepRaPe~YF~~~~~---~~~~~~f~~e~~~~K~eYee~k~ri~~a~------~~~~~~~~~~~~~~~~~~~ 227 (756)
T PLN02190 157 VPFCKKYNVRVRAPFRYFLNPPV---ATEDSEFSKDWEMTKREYEKLSRKVEDAT------GDSHWLDAEDDFEAFSNTK 227 (756)
T ss_pred cccccccCCCcCCHHHHhcCCCC---CCCCchhHHHHHHHHHHHHHHHHHHHhhc------cCCCCcccCCcccccCCCC
Confidence 99999999999999999998643 33458999999999999999999999864 4567777655 7899999
Q ss_pred cCCCccceeeeecCCCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHH
Q 002425 341 VRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALR 420 (924)
Q Consensus 341 ~rdhp~~iqv~~~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr 420 (924)
++|||+||||+++++|+ +.+|++||+||||||||||+++||+||||||+|+||||++||||||||||||||+|||+++|
T Consensus 228 ~~dH~~iiqVll~~~~~-~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r 306 (756)
T PLN02190 228 PNDHSTIVKVVWENKGG-VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVR 306 (756)
T ss_pred CCCCccceEEEecCCCC-ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHH
Confidence 99999999999999775 45789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCC-cceEEEecCceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCC
Q 002425 421 EAMCFMMDPTSG-KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKP 499 (924)
Q Consensus 421 ~am~ff~Dp~~g-~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~ 499 (924)
+||||||||+.+ +++|||||||+|+ |+|+|++++|||++|+|+||+|||+|+||||+|||+||||++||..++.
T Consensus 307 ~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~ 381 (756)
T PLN02190 307 QAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDD 381 (756)
T ss_pred HhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccc
Confidence 999999999754 5899999999998 7899999999999999999999999999999999999999988743221
Q ss_pred CCCcCCCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhH
Q 002425 500 PRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLK 579 (924)
Q Consensus 500 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~ 579 (924)
... .. ..++ ...++.+++++||+|+.|++|+..
T Consensus 382 ~~~------------~~----------------------------------~~~~-~~~~~~~~~~~fg~s~~f~~s~~~ 414 (756)
T PLN02190 382 GSL------------SS----------------------------------VATR-EFLAEDSLAREFGNSKEMVKSVVD 414 (756)
T ss_pred ccc------------cc----------------------------------cccc-cccchhhhhhhcCCcHHHHHHHHH
Confidence 000 00 0011 134566788999999999999987
Q ss_pred hhCCCCC-CCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHH
Q 002425 580 EAGGVPT-GASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLS 658 (924)
Q Consensus 580 e~Gg~~~-~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~ 658 (924)
+.-+-+. ..+.+++++||++|+||+||++|+||+||||.|+|+|||+.||++||++|||++||+|+++||.|.+|+++.
T Consensus 415 ~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~ 494 (756)
T PLN02190 415 ALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGP 494 (756)
T ss_pred HhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChH
Confidence 6633332 334578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHH
Q 002425 659 DRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASI 738 (924)
Q Consensus 659 ~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~~~~~ 738 (924)
+.+.||+||+.|++|++++++||++++..++|++.||++|++.++ |++++++++|+++|++||++|++++|.. .++.
T Consensus 495 ~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~ 571 (756)
T PLN02190 495 EAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG--VYLG 571 (756)
T ss_pred HHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc--cHHH
Confidence 999999999999999999999999976568999999999999988 9999999999999999999999999965 3566
Q ss_pred HHHHHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCC-----------
Q 002425 739 LFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAAD----------- 807 (924)
Q Consensus 739 ~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~----------- 807 (924)
+++++++.+.+++++|++|+|.++++||||||||+|.++|++++|++++++|+|++++++|+||+|..+
T Consensus 572 ~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~ 651 (756)
T PLN02190 572 IIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPS 651 (756)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEeeccccccccccccccc
Confidence 778888899999999999999999999999999999999999999999999999999999999999643
Q ss_pred --C--Cc--cccccccccccchhhHHHHHHHHHHHHHHHHHHHhhc---CCCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 002425 808 --D--GE--FSDLYLFKWTSLLIPPLTLLVFNLIGVIIGVADAISN---GYETWGPLFGKLFFSLWVILHLYPFLKGFLG 878 (924)
Q Consensus 808 --~--~~--~~~ly~f~ws~l~iP~~~Llllnlvaiv~gi~~~i~~---g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~g 878 (924)
+ ++ .+++|+|+|+++++|.++++++|++|++.|+++++.. +.+.|+ .++++++++|+++|++||++||++
T Consensus 652 ~~~~~~~~~~~~~f~f~~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s~~~~~~-~l~q~~~~~~vv~~~~P~~~gl~~ 730 (756)
T PLN02190 652 QGEDDGPNSDSGKFEFDGSLYFLPGTFIVLVNLAALAGFLVGLQRSSYSHGGGGS-GLAEACGCILVVMLFLPFLKGLFE 730 (756)
T ss_pred cccccchhhhcceeEecceehHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccc-cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 11 2578999999999999999999999999888876532 223444 459999999999999999999997
Q ss_pred CC-CCcchhHHHHHHHHHHHHHhhhe
Q 002425 879 KQ-DRLPTILLVWAILLASIFSLLWA 903 (924)
Q Consensus 879 R~-~r~P~~v~~~s~~l~~~f~~l~v 903 (924)
|+ +|||++|+++|++|+.+|+++.|
T Consensus 731 kdkg~iP~s~~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 731 KGKYGIPLSTLSKAAFLAVLFVVFSV 756 (756)
T ss_pred CCCCCCChhHHHHHHHHHHHHHhccC
Confidence 75 58999999999999999999875
No 10
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.2e-187 Score=1633.26 Aligned_cols=706 Identities=36% Similarity=0.689 Sum_probs=648.7
Q ss_pred CCCCCceeeeecCCCccchhHHHHHHHHHHHHHHHHHHhccCCCch-hHHHHHHHHHHHHHHHHHHHhhcccccccccch
Q 002425 102 EGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDA-YGLWLTSVICEIWFAVSWILDQFPKWDPIVRET 180 (924)
Q Consensus 102 ~~~~pl~~~~~~~~~~~~~~R~~~~~~l~~~~~yl~wRi~~~~~~~-~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~ 180 (924)
....||+++++++++. +||+++++++++++++|+||+++...+. .+.|+++++||+||+|+|+|+|++||+|++|+|
T Consensus 9 ~~~~pL~~~~~~~~~~--~~R~~~~~~~~~i~~ll~~r~~~~~~~~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r~~ 86 (734)
T PLN02893 9 TGAPPLHTCHPMRRTI--ANRVFAVVYSCAILALLYHHVIALLHSTTTLITLLLLLADIVLAFMWATTQAFRMCPVHRRV 86 (734)
T ss_pred CCCCCceeeeecCCch--HHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 3456999999988874 5999999999999999999999976655 789999999999999999999999999999999
Q ss_pred hhhHhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhh
Q 002425 181 YLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFAR 260 (924)
Q Consensus 181 ~~~rL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~ 260 (924)
|+|||+++++ +++||+|||||||+||.||||++|+|||||+||+|||+||++|||||||+|++|||||.|||+|||
T Consensus 87 ~~~~L~~~~~----~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~ 162 (734)
T PLN02893 87 FIEHLEHYAK----ESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFAT 162 (734)
T ss_pred CHHHHhhhcc----cccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHH
Confidence 9999997664 378999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCC-----CC
Q 002425 261 KWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDG-----TP 335 (924)
Q Consensus 261 ~WvpfCkk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg-----~~ 335 (924)
+||||||||||||||||+||+++ +++|++||++||+||||||+|||+++++ +++|++ |.|.++ ++
T Consensus 163 ~WvPFCrk~~ie~R~P~~YF~~~--------~~~~~~e~~~~k~~Yee~k~ri~~~~~~-~~~~~~-~~~~~~~~~~f~~ 232 (734)
T PLN02893 163 HWLPFCKKNKIVERCPEAYFSSN--------SHSWSPETEQIKMMYESMKVRVENVVER-GKVSTD-YITCDQEREAFSR 232 (734)
T ss_pred hhcccccccCCCcCCHHHHhccC--------CCccchHHHHHHHHHHHHHHHHHHHHhc-CcCchh-hhhhccccccccc
Confidence 99999999999999999999997 3467899999999999999999999876 888887 655433 78
Q ss_pred CCCCC-cCCCccceeeeecCCCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCC
Q 002425 336 WPGNN-VRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYIN 414 (924)
Q Consensus 336 w~~~~-~rdhp~~iqv~~~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~ 414 (924)
|++|+ ++|||+||||+++++++.|.+|++||+|+|||||||||++||+||||||+++||||++||||||||||||||+|
T Consensus 233 w~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n 312 (734)
T PLN02893 233 WTDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSN 312 (734)
T ss_pred CcCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCC
Confidence 98775 68999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCC
Q 002425 415 NSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 494 (924)
Q Consensus 415 ~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~ 494 (924)
||++|++|||||+||+.++++|||||||+|+|++++|+|+|++++||+++|+|+||+|||+||||||+|||+||||..+.
T Consensus 313 ~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~ 392 (734)
T PLN02893 313 DPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS 392 (734)
T ss_pred chhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997431
Q ss_pred CCCCCCCCcCCCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHH
Q 002425 495 VKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFI 574 (924)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~ 574 (924)
... ++++ .+++
T Consensus 393 ~~~-------------------------------------------~~~~---------------------~~~~----- 403 (734)
T PLN02893 393 LIL-------------------------------------------PEIP---------------------ELNP----- 403 (734)
T ss_pred ccc-------------------------------------------hhhh---------------------hccc-----
Confidence 000 0000 0001
Q ss_pred HhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCC
Q 002425 575 ASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAP 654 (924)
Q Consensus 575 ~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP 654 (924)
.++...+...+++++||++|+||.||++|+||+|+||.|+|+|||+.||++||++|||++|++|++++|.|++|
T Consensus 404 ------~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP 477 (734)
T PLN02893 404 ------DHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSP 477 (734)
T ss_pred ------ccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCC
Confidence 11223344567899999999999999999999999999999999999999999999999999988888899999
Q ss_pred CCHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchh
Q 002425 655 INLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISN 734 (924)
Q Consensus 655 ~tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~ 734 (924)
+|+.++++||+|||.|++|++++++||+++|. ++|++.||++|++.++||++++++++|+++|++||++|++++|.++.
T Consensus 478 ~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~-~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~ 556 (734)
T PLN02893 478 INLHDVLNQQKRWSVGLLEVAFSKYSPITFGV-KSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASD 556 (734)
T ss_pred CCHHHHHHHHHHHHhhhHHHHhhccCchhhcc-cCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccH
Confidence 99999999999999999999999999999763 78999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCCCCc---c
Q 002425 735 YASILFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGE---F 811 (924)
Q Consensus 735 ~~~~~fi~lfls~~~~~lLe~rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~---~ 811 (924)
.+++.++.+++++++++++|++|+|.++++|||+|++|+|.++++++++++++++|.||+++.+|+||+|+.+++. +
T Consensus 557 ~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y 636 (734)
T PLN02893 557 PWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRY 636 (734)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCccccccccc
Confidence 8888888899999999999999999999999999999999999999999999999999999999999999976422 1
Q ss_pred -cccccccc-ccchhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCCC--CcchhH
Q 002425 812 -SDLYLFKW-TSLLIPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQD--RLPTIL 887 (924)
Q Consensus 812 -~~ly~f~w-s~l~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~~--r~P~~v 887 (924)
.++|+|+| +++++|+++++++|++|+++|+++++.+ ..|+.+++++++++|++++++||++||++|++ |||++|
T Consensus 637 ~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~--~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v 714 (734)
T PLN02893 637 EQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQ--RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKI 714 (734)
T ss_pred ccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccH
Confidence 47899995 8899999999999999999999998865 34778889999999999999999999999986 899999
Q ss_pred HHHHHHHHHHHHhh
Q 002425 888 LVWAILLASIFSLL 901 (924)
Q Consensus 888 ~~~s~~l~~~f~~l 901 (924)
++||++||.+++++
T Consensus 715 ~~~s~~l~~~~~~~ 728 (734)
T PLN02893 715 TLISIVLAWALYLA 728 (734)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888765
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.4e-67 Score=635.46 Aligned_cols=491 Identities=25% Similarity=0.390 Sum_probs=386.6
Q ss_pred HHH-HHHHHHHHHHHHHHHhccCCCch----hHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHhhhhhhcCCCCC
Q 002425 122 RLI-ILLRLVILGLFFHYRILHPVNDA----YGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPS 196 (924)
Q Consensus 122 R~~-~~~~l~~~~~yl~wRi~~~~~~~----~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~~~~rL~~r~~~~~~~~ 196 (924)
|++ +++.+++.++|++||++.+++.. ..+.++++++|+++.++.++..+..+.|.+|.+.+ .+.+++
T Consensus 57 ~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~--------~~~~~~ 128 (713)
T TIGR03030 57 RLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVP--------LPLDPE 128 (713)
T ss_pred HHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccC--------CCCCcc
Confidence 654 45666668999999999987643 34567899999999999888888888888776421 223457
Q ss_pred CCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCc
Q 002425 197 DLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAP 276 (924)
Q Consensus 197 ~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraP 276 (924)
.+|+|||+||||| |++.++.+|+.+++++|||.||+.|||+|||+++-|.....+
T Consensus 129 ~~P~VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~---------------------- 183 (713)
T TIGR03030 129 EWPTVDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDP---------------------- 183 (713)
T ss_pred cCCeeEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchh----------------------
Confidence 7999999999999 999999999999999999999999999999998744321111
Q ss_pred hhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCC
Q 002425 277 EWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNG 356 (924)
Q Consensus 277 e~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g 356 (924)
...|. ++..+++ .+++++
T Consensus 184 ------------------~~~~~---~~~~~~~----~~l~~~------------------------------------- 201 (713)
T TIGR03030 184 ------------------EQAEA---AQRREEL----KEFCRK------------------------------------- 201 (713)
T ss_pred ------------------hhhhh---hhhHHHH----HHHHHH-------------------------------------
Confidence 01110 0011122 122210
Q ss_pred cccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcce
Q 002425 357 VRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKI 435 (924)
Q Consensus 357 ~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~v 435 (924)
.++.|++|++ |+|+||||||++++ .++||||+++|||+ +++|++|++++++| .|| ++
T Consensus 202 ---------~~v~yi~r~~----n~~~KAgnLN~al~----~a~gd~Il~lDAD~-v~~pd~L~~~v~~f~~dp----~v 259 (713)
T TIGR03030 202 ---------LGVNYITRPR----NVHAKAGNINNALK----HTDGELILIFDADH-VPTRDFLQRTVGWFVEDP----KL 259 (713)
T ss_pred ---------cCcEEEECCC----CCCCChHHHHHHHH----hcCCCEEEEECCCC-CcChhHHHHHHHHHHhCC----CE
Confidence 0388999988 68999999999999 58999999999999 58999999999988 588 89
Q ss_pred EEEecCceecCCCcc-------ccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCC
Q 002425 436 CYVQFPQRFDGIDRH-------DRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLP 508 (924)
Q Consensus 436 a~VQ~PQ~F~n~d~~-------d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~ 508 (924)
|+||+||.|+|.|+. +++.+++..||+..++|+|.++++++||||+++||+||
T Consensus 260 ~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al-------------------- 319 (713)
T TIGR03030 260 FLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREAL-------------------- 319 (713)
T ss_pred EEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHH--------------------
Confidence 999999999998753 34567888999999999999999999999999999887
Q ss_pred CccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCC
Q 002425 509 KWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGA 588 (924)
Q Consensus 509 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~ 588 (924)
+++||+++
T Consensus 320 ----------------------------------------------------------------------~~iGGf~~-- 327 (713)
T TIGR03030 320 ----------------------------------------------------------------------DEIGGIAG-- 327 (713)
T ss_pred ----------------------------------------------------------------------HHcCCCCC--
Confidence 35676543
Q ss_pred chhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHh
Q 002425 589 STASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWA 668 (924)
Q Consensus 589 ~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA 668 (924)
++++||++++++|+++||+++|+++ ..+ +|++|+|++++++||.||+
T Consensus 328 -------------------------------~~vtED~~l~~rL~~~G~~~~y~~~-~~~-~g~~p~sl~~~~~Qr~RWa 374 (713)
T TIGR03030 328 -------------------------------ETVTEDAETALKLHRRGWNSAYLDR-PLI-AGLAPETLSGHIGQRIRWA 374 (713)
T ss_pred -------------------------------CCcCcHHHHHHHHHHcCCeEEEecc-ccc-cccCCCCHHHHHHHHHHHh
Confidence 6899999999999999999999964 333 8999999999999999999
Q ss_pred hhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHH
Q 002425 669 LGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIA 748 (924)
Q Consensus 669 ~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~~~~~~fi~lfls~~ 748 (924)
+|++|+++. .+|++ .+++++.||++|+++++||+.++++++|+++|++++++|..+++.... .++++++|++
T Consensus 375 ~G~~qi~~~-~~pl~---~~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~~~----~~~~~~lp~~ 446 (713)
T TIGR03030 375 QGMMQIFRL-DNPLL---KRGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVASAL----EILAYALPHM 446 (713)
T ss_pred cChHHHHhh-hCccc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeCCHH----HHHHHHHHHH
Confidence 999999974 58987 689999999999999999999999999999999999999999875321 2334456777
Q ss_pred HHHHHHhhc-cCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCCCCccccccccccccchhhHH
Q 002425 749 ATGILEMQW-GGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPL 827 (924)
Q Consensus 749 ~~~lLe~rw-sG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~l~iP~~ 827 (924)
+.+++.+.| .|.....||+ |.+ .+....+.+...+.+.+++++.+|+|||||+..+.. .+ ++++.|++
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~----~~--~~~~~p~~ 515 (713)
T TIGR03030 447 LHSLLTNSYLFGRVRWPFWS-EVY----ETVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED----YF--SPLSRPYL 515 (713)
T ss_pred HHHHHHHHHHcCCeecchHH-HHH----HHHHHHHHHHHHHHHHhCcCCCCceecCCCcccccc----cc--chHHHHHH
Confidence 777666443 4444456774 433 222233444455666789999999999999863221 12 25789999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 002425 828 TLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFL 877 (924)
Q Consensus 828 ~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~ 877 (924)
+++++|++|+++|+++.+..+. ...+.+++++|.+||++.+..++.
T Consensus 516 ~l~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~n~~~~~~~~~ 561 (713)
T TIGR03030 516 ILFALILAGLAFGLYRIYGYPI----ERGVLLVVLGWNLLNLILLGAALA 561 (713)
T ss_pred HHHHHHHHHHHHHHHHHhcCcc----ccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999864332 234568999999999998888883
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-67 Score=635.41 Aligned_cols=472 Identities=25% Similarity=0.410 Sum_probs=376.0
Q ss_pred HHHHHHHHHHHHHHHHhccCCCch----hHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHhhhhhhcCCCCCCCC
Q 002425 124 IILLRLVILGLFFHYRILHPVNDA----YGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLA 199 (924)
Q Consensus 124 ~~~~~l~~~~~yl~wRi~~~~~~~----~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~~~~rL~~r~~~~~~~~~lp 199 (924)
++++.+++.++|++||++.+++.. ..+.++++++|+++.++.+++.+..+.|..|.+. +.+..++.+|
T Consensus 189 l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--------~~~~~~~~~P 260 (852)
T PRK11498 189 LIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--------PLPKDMSLWP 260 (852)
T ss_pred HHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--------CCCcccCCCC
Confidence 556777889999999999987632 4556788999999999889888888778877532 1222346789
Q ss_pred ceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhh
Q 002425 200 DIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWY 279 (924)
Q Consensus 200 ~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~y 279 (924)
+|||+||||| ||..++++|+.+++++|||.+|+.|||+|||+++-| .++ |
T Consensus 261 ~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t-------~~l-------a------------- 310 (852)
T PRK11498 261 TVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF-------RQF-------A------------- 310 (852)
T ss_pred cEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH-------HHH-------H-------------
Confidence 9999999999 999999999999999999999999999999998621 000 0
Q ss_pred hhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCccc
Q 002425 280 FAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRD 359 (924)
Q Consensus 280 F~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d 359 (924)
+|
T Consensus 311 ---------------------------~~--------------------------------------------------- 312 (852)
T PRK11498 311 ---------------------------QE--------------------------------------------------- 312 (852)
T ss_pred ---------------------------HH---------------------------------------------------
Confidence 00
Q ss_pred ccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHh-hcCCCCCcceEEE
Q 002425 360 IEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCF-MMDPTSGKKICYV 438 (924)
Q Consensus 360 ~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~f-f~Dp~~g~~va~V 438 (924)
.++.|++|++ |.|+||||+|++++ .++||||+++|||| ++++++|+++|++ +.|| ++|+|
T Consensus 313 ------~~v~yI~R~~----n~~gKAGnLN~aL~----~a~GEyIavlDAD~-ip~pdfL~~~V~~f~~dP----~VglV 373 (852)
T PRK11498 313 ------VGVKYIARPT----HEHAKAGNINNALK----YAKGEFVAIFDCDH-VPTRSFLQMTMGWFLKDK----KLAMM 373 (852)
T ss_pred ------CCcEEEEeCC----CCcchHHHHHHHHH----hCCCCEEEEECCCC-CCChHHHHHHHHHHHhCC----CeEEE
Confidence 0278999887 67899999999999 58999999999999 6899999999986 5799 89999
Q ss_pred ecCceecCCCccc-------cccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcc
Q 002425 439 QFPQRFDGIDRHD-------RYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWC 511 (924)
Q Consensus 439 Q~PQ~F~n~d~~d-------~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~ 511 (924)
|+||.|+|.|+.. .+.++++.||+..++|+|.++++++|||++++||+||
T Consensus 374 Qtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaL----------------------- 430 (852)
T PRK11498 374 QTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPL----------------------- 430 (852)
T ss_pred EcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHH-----------------------
Confidence 9999999987642 3567888999999999999999999999999999877
Q ss_pred ccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchh
Q 002425 512 CCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTA 591 (924)
Q Consensus 512 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~ 591 (924)
+++||+++
T Consensus 431 -------------------------------------------------------------------eeVGGfd~----- 438 (852)
T PRK11498 431 -------------------------------------------------------------------DEIGGIAV----- 438 (852)
T ss_pred -------------------------------------------------------------------HHhcCCCC-----
Confidence 46787664
Q ss_pred hHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhh
Q 002425 592 SLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 671 (924)
Q Consensus 592 ~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~ 671 (924)
++++||++++++|+++||+++|+++ ..+ .|++|+|++++++||.||++|+
T Consensus 439 ----------------------------~titED~dlslRL~~~Gyrv~yl~~-~~a-~glaPesl~~~~~QR~RWarG~ 488 (852)
T PRK11498 439 ----------------------------ETVTEDAHTSLRLHRRGYTSAYMRI-PQA-AGLATESLSAHIGQRIRWARGM 488 (852)
T ss_pred ----------------------------CccCccHHHHHHHHHcCCEEEEEec-cce-eEECCCCHHHHHHHHHHHHHHH
Confidence 6899999999999999999999954 344 7999999999999999999999
Q ss_pred HHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHHHH
Q 002425 672 VEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATG 751 (924)
Q Consensus 672 lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~~~~~~fi~lfls~~~~~ 751 (924)
+|+++ +++|++ .+++++.||++|+++++||+.+++.++|+++|++|+++|+.++..... .++.+++|+++..
T Consensus 489 lQi~r-~~~pl~---~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a~~~----~i~~y~lP~~~~~ 560 (852)
T PRK11498 489 VQIFR-LDNPLT---GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYAPAL----MIALFVLPHMIHA 560 (852)
T ss_pred HHHHH-HhChhc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeCChH----HHHHHHHHHHHHH
Confidence 99997 468987 789999999999999999999999999999999999999988753211 2233445666554
Q ss_pred HHHhhc-cCccccccccchhhHHHhhHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCCCCccccccccccccchhhHHHHH
Q 002425 752 ILEMQW-GGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKVVGGVNTNFTVTSKAADDGEFSDLYLFKWTSLLIPPLTLL 830 (924)
Q Consensus 752 lLe~rw-sG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~l~iP~~~Ll 830 (924)
.+...| +|.....||+ |. +..+.++.++ ...+...+++++.+|+||||++..+.. .|+|. +..|+++++
T Consensus 561 ~l~~~~~~g~~r~~~ws-ei---ye~v~a~~l~-~~~~~~ll~p~~~~F~VTpKg~~~~~~----~~~~~-~~~P~~~L~ 630 (852)
T PRK11498 561 SLTNSRIQGKYRHSFWS-EI---YETVLAWYIA-PPTTVALFNPHKGKFNVTAKGGLVEEE----YVDWV-ISRPYIFLV 630 (852)
T ss_pred HHHHHHhcCcchHhHHH-HH---HHHHHHHHHH-HHHHHHHcCccCCCcccCCCCcccccc----ceehH-HHHHHHHHH
Confidence 444433 3332333442 32 2333333322 233444778999999999999763321 25664 678999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 002425 831 VFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGF 876 (924)
Q Consensus 831 llnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL 876 (924)
++|++|+++|+++.+.+.. ....+.+++++|+++|++.+..++
T Consensus 631 ~L~l~gl~~g~~r~~~~~~---~~~~~~~~~~~W~~~nl~~l~~a~ 673 (852)
T PRK11498 631 LLNLVGVAVGIWRYFYGPP---NEILTVIVSLVWVFYNLIILGGAV 673 (852)
T ss_pred HHHHHHHHHHHHHHHhCCc---ccchhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999765321 223456799999999999887777
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.3e-36 Score=363.30 Aligned_cols=361 Identities=19% Similarity=0.246 Sum_probs=245.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCch---------hHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHhhhhhh
Q 002425 120 PYRLIILLRLVILGLFFHYRILHPVNDA---------YGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYE 190 (924)
Q Consensus 120 ~~R~~~~~~l~~~~~yl~wRi~~~~~~~---------~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~~~~rL~~r~~ 190 (924)
..|++.++..++...|..|+....++.. ..+-.+++..+.+.+.+-+++.+.... .|... .+...-.
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~--~~~~~~~ 115 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKY--SISASAA 115 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcc--cCCcccc
Confidence 4577777777788899999998754321 111122333344433333444332211 11111 0100000
Q ss_pred cCCCCCCCCceeEEEecCCCCCCChHHH----HHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHH
Q 002425 191 KEGKPSDLADIDIFVSTVDPMKEPPLIT----ANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFC 266 (924)
Q Consensus 191 ~~~~~~~lp~VDvfV~t~dp~kEp~~~~----~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfC 266 (924)
.+......|.|+|+||+|| |++..+ ..|+.|+.+.||| +++.+||+|||.++-+-.
T Consensus 116 ~~~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~~~---------------- 175 (691)
T PRK05454 116 GDPPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDIAA---------------- 175 (691)
T ss_pred cCCCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhHHH----------------
Confidence 1123456789999999999 998754 5556677779998 579999999999873211
Q ss_pred HhhCCCCCCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCcc
Q 002425 267 KKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPG 346 (924)
Q Consensus 267 kk~~iepraPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~ 346 (924)
.|+ +.++++..+.
T Consensus 176 ------------------------------~e~----~~~~~L~~~~--------------------------------- 188 (691)
T PRK05454 176 ------------------------------AEE----AAWLELRAEL--------------------------------- 188 (691)
T ss_pred ------------------------------HHH----HHHHHHHHhc---------------------------------
Confidence 111 1233332110
Q ss_pred ceeeeecCCCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh
Q 002425 347 MIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM 426 (924)
Q Consensus 347 ~iqv~~~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff 426 (924)
+. -+++.|.+|++ |.|+||||+|.+++.++ .+++||+++|||+ ++.+++|++++.+|
T Consensus 189 ------~~----------~~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~eyivvLDADs-~m~~d~L~~lv~~m 245 (691)
T PRK05454 189 ------GG----------EGRIFYRRRRR----NVGRKAGNIADFCRRWG--GAYDYMVVLDADS-LMSGDTLVRLVRLM 245 (691)
T ss_pred ------CC----------CCcEEEEECCc----CCCccHHHHHHHHHhcC--CCcCEEEEEcCCC-CCCHHHHHHHHHHH
Confidence 00 02589988887 68899999999999654 5779999999999 57999999999987
Q ss_pred c-CCCCCcceEEEecCceecCCCcc-ccccc-cchhhhhhcccccccCCC--ccccccccchhhhhhcCCCCCCCCCCCC
Q 002425 427 M-DPTSGKKICYVQFPQRFDGIDRH-DRYSN-RNVVFFDINMKGLDGIQG--PIYVGTGCVFRRQALYGYDAPVKKKPPR 501 (924)
Q Consensus 427 ~-Dp~~g~~va~VQ~PQ~F~n~d~~-d~~~n-~~~~Ff~i~~~gldg~qg--p~y~GTg~v~RR~ALyG~~p~~~~~~~~ 501 (924)
. || ++|.||+|+.+.|.+.- .|..+ ...++.++...|++.||+ ..|+|+|+++||+|+..
T Consensus 246 ~~dP----~vGlVQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~----------- 310 (691)
T PRK05454 246 EANP----RAGLIQTLPVAVGADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE----------- 310 (691)
T ss_pred hhCc----CEEEEeCCccCcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH-----------
Confidence 5 99 89999999999987631 22211 234555667788888773 57999999999999952
Q ss_pred CcCCCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhh
Q 002425 502 KTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEA 581 (924)
Q Consensus 502 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~ 581 (924)
|||... +.+.
T Consensus 311 ------------~~glp~----------------------------------------------------------L~g~ 320 (691)
T PRK05454 311 ------------HCGLPP----------------------------------------------------------LPGR 320 (691)
T ss_pred ------------hcCCcc----------------------------------------------------------cccc
Confidence 222110 0112
Q ss_pred CCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHH
Q 002425 582 GGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRL 661 (924)
Q Consensus 582 Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l 661 (924)
| ||..++++||++++.+|+++||+++|+ |+...+++++|+|+.+++
T Consensus 321 ~---------------------------------p~~~~~LseD~~~a~~l~~~GyrV~~~-pd~~~~~ee~P~tl~~~~ 366 (691)
T PRK05454 321 G---------------------------------PFGGHILSHDFVEAALMRRAGWGVWLA-PDLPGSYEELPPNLLDEL 366 (691)
T ss_pred C---------------------------------CCCCCcccHHHHHHHHHHHCCCEEEEc-CccccccccCCCCHHHHH
Confidence 2 445579999999999999999999999 453323899999999999
Q ss_pred HHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHH-HHHHH
Q 002425 662 HQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYC-TLPAI 720 (924)
Q Consensus 662 ~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liyl-llP~l 720 (924)
+||.||++|++|++.. ++ .+++++.+|++|++.++.++.+...++++ +.|++
T Consensus 367 ~qr~RW~~G~lQ~l~~----l~---~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~ 419 (691)
T PRK05454 367 KRDRRWCQGNLQHLRL----LL---AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTAL 419 (691)
T ss_pred HHHHHHHhchHHHHHH----HH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999852 33 57899999999988777776654444433 33443
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.3e-34 Score=310.55 Aligned_cols=182 Identities=22% Similarity=0.338 Sum_probs=145.9
Q ss_pred CcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEecCcee
Q 002425 366 PRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQFPQRF 444 (924)
Q Consensus 366 P~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~-Dp~~g~~va~VQ~PQ~F 444 (924)
++++|++|++ ++|+||||||+++...+ +++|||+++|||+ ++.|++|++++.+|. || +||.||+||++
T Consensus 67 ~~v~~~~r~~----~~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~-~~~p~~l~~~v~~~~~~~----~vg~vq~~~~~ 135 (254)
T cd04191 67 GRIYYRRRRE----NTGRKAGNIADFCRRWG--SRYDYMVVLDADS-LMSGDTIVRLVRRMEANP----RAGIIQTAPKL 135 (254)
T ss_pred CcEEEEEcCC----CCCccHHHHHHHHHHhC--CCCCEEEEEeCCC-CCCHHHHHHHHHHHHhCC----CEEEEeCCcee
Confidence 4699999998 57899999999998432 6889999999999 589999999999885 99 89999999999
Q ss_pred cCCCcc-ccc-cccchhhhhhcccccccCCC--ccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccc
Q 002425 445 DGIDRH-DRY-SNRNVVFFDINMKGLDGIQG--PIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK 520 (924)
Q Consensus 445 ~n~d~~-d~~-~n~~~~Ff~i~~~gldg~qg--p~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~ 520 (924)
.|.+.. .+. .-++..|..+.+.|++.|++ .+++||+.++||+||... |
T Consensus 136 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~-----------------------~----- 187 (254)
T cd04191 136 IGAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH-----------------------C----- 187 (254)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh-----------------------c-----
Confidence 987742 221 11355666777888887765 589999999999998411 0
Q ss_pred cccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHh
Q 002425 521 SKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHV 600 (924)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v 600 (924)
.+.++||+.
T Consensus 188 --------------------------------------------------------~~~~i~g~g--------------- 196 (254)
T cd04191 188 --------------------------------------------------------ALPVLPGRP--------------- 196 (254)
T ss_pred --------------------------------------------------------CCccccCCC---------------
Confidence 001234321
Q ss_pred hccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHH
Q 002425 601 ISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVE 673 (924)
Q Consensus 601 ~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQ 673 (924)
||..++++||+++|++++.+||+++|.+. ..+.++++|+|++++++||.||++|++|
T Consensus 197 ---------------~~~~~~l~eD~~l~~~~~~~G~ri~~~~~-~~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 197 ---------------PFGGHILSHDFVEAALMRRAGWEVRLAPD-LEGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred ---------------CCCCCeecHHHHHHHHHHHcCCEEEEccC-CcceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 56668999999999999999999999944 3323799999999999999999999998
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.98 E-value=1.1e-30 Score=295.33 Aligned_cols=233 Identities=28% Similarity=0.430 Sum_probs=173.4
Q ss_pred CCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCch
Q 002425 198 LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPE 277 (924)
Q Consensus 198 lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe 277 (924)
+|.|||+||+|| |++.++.+|+.|++++|||. +.|+|+|||+++-|++ +|++++.
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~--------------~~~~~~~------ 107 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYE--------------ILEELGA------ 107 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHH--------------HHHHHHh------
Confidence 699999999999 99999999999999999997 7899999999985544 2222210
Q ss_pred hhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCc
Q 002425 278 WYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGV 357 (924)
Q Consensus 278 ~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~ 357 (924)
+ ++..++
T Consensus 108 ------------------------------~-----------------------------------~~~~~~-------- 114 (439)
T COG1215 108 ------------------------------E-----------------------------------YGPNFR-------- 114 (439)
T ss_pred ------------------------------h-----------------------------------cCcceE--------
Confidence 0 000011
Q ss_pred ccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEE
Q 002425 358 RDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICY 437 (924)
Q Consensus 358 ~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~ 437 (924)
+.|. ++ ++++|+||+|.++. .+.+|+|+++|||+ ++.|++|++++..|.|+. .+|.
T Consensus 115 ----------~~~~--~~----~~~gK~~al~~~l~----~~~~d~V~~~DaD~-~~~~d~l~~~~~~f~~~~---~~~v 170 (439)
T COG1215 115 ----------VIYP--EK----KNGGKAGALNNGLK----RAKGDVVVILDADT-VPEPDALRELVSPFEDPP---VGAV 170 (439)
T ss_pred ----------EEec--cc----cCccchHHHHHHHh----hcCCCEEEEEcCCC-CCChhHHHHHHhhhcCCC---eeEE
Confidence 1211 22 58899999999999 56799999999999 699999999999999885 4479
Q ss_pred EecCceecCCCccccccccchhhhh-----hcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccc
Q 002425 438 VQFPQRFDGIDRHDRYSNRNVVFFD-----INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCC 512 (924)
Q Consensus 438 VQ~PQ~F~n~d~~d~~~n~~~~Ff~-----i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~ 512 (924)
+|.||.+.+.++....+..+.+.|. ....+.++....+++|++.++||+||
T Consensus 171 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL------------------------ 226 (439)
T COG1215 171 VGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSAL------------------------ 226 (439)
T ss_pred eCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHH------------------------
Confidence 9999999887641111111111111 11112222244556666666666555
Q ss_pred cccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhh
Q 002425 513 CCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTAS 592 (924)
Q Consensus 513 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~ 592 (924)
++.||
T Consensus 227 ------------------------------------------------------------------~~~g~--------- 231 (439)
T COG1215 227 ------------------------------------------------------------------EEVGG--------- 231 (439)
T ss_pred ------------------------------------------------------------------HHhCC---------
Confidence 56664
Q ss_pred HHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhH
Q 002425 593 LLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSV 672 (924)
Q Consensus 593 ~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~l 672 (924)
|...++|||.+++++++.+|||+.|++.. . +++++|+|+.++++||.||++|++
T Consensus 232 ------------------------~~~~~i~ED~~lt~~l~~~G~~~~~~~~~-~-~~~~~p~t~~~~~~Qr~RW~~g~~ 285 (439)
T COG1215 232 ------------------------WLEDTITEDADLTLRLHLRGYRVVYVPEA-I-VWTEAPETLKELWRQRLRWARGGL 285 (439)
T ss_pred ------------------------CCCCceeccHHHHHHHHHCCCeEEEeecc-e-EeeeCcccHHHHHHHHHHHHcccc
Confidence 45579999999999999999999999553 3 489999999999999999999999
Q ss_pred HHHHh
Q 002425 673 EILLS 677 (924)
Q Consensus 673 Qil~~ 677 (924)
|++..
T Consensus 286 ~~~~~ 290 (439)
T COG1215 286 QVLLL 290 (439)
T ss_pred eeeeh
Confidence 99974
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.97 E-value=2.7e-29 Score=288.46 Aligned_cols=232 Identities=22% Similarity=0.269 Sum_probs=168.3
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCC
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRA 275 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepra 275 (924)
...|.|+|+||+|| |+. .+.+|+.|++++||| ++.|+|.|||+++-|.+.+.+
T Consensus 72 ~~~p~vsViIP~yN---E~~-~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~--------------------- 124 (444)
T PRK14583 72 KGHPLVSILVPCFN---EGL-NARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDA--------------------- 124 (444)
T ss_pred CCCCcEEEEEEeCC---CHH-HHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHH---------------------
Confidence 35799999999999 875 578999999999999 489999999998744332211
Q ss_pred chhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCC
Q 002425 276 PEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQN 355 (924)
Q Consensus 276 Pe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~ 355 (924)
+ .+ .|
T Consensus 125 ---------------------------------~-------~~------------------------~~----------- 129 (444)
T PRK14583 125 ---------------------------------L-------LA------------------------ED----------- 129 (444)
T ss_pred ---------------------------------H-------HH------------------------hC-----------
Confidence 1 00 01
Q ss_pred CcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcc
Q 002425 356 GVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKK 434 (924)
Q Consensus 356 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~ 434 (924)
|++.++.+++ ...||+|+|++++ .+++||++++|||+ +++|++|++.+..| .|| +
T Consensus 130 ----------~~v~vv~~~~-----n~Gka~AlN~gl~----~a~~d~iv~lDAD~-~~~~d~L~~lv~~~~~~~----~ 185 (444)
T PRK14583 130 ----------PRLRVIHLAH-----NQGKAIALRMGAA----AARSEYLVCIDGDA-LLDKNAVPYLVAPLIANP----R 185 (444)
T ss_pred ----------CCEEEEEeCC-----CCCHHHHHHHHHH----hCCCCEEEEECCCC-CcCHHHHHHHHHHHHhCC----C
Confidence 2344555443 2459999999998 47899999999999 68999999999855 577 7
Q ss_pred eEEEecCceecCCCcc-ccc-cccchhhhhhcccccccCCCccc-cccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcc
Q 002425 435 ICYVQFPQRFDGIDRH-DRY-SNRNVVFFDINMKGLDGIQGPIY-VGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWC 511 (924)
Q Consensus 435 va~VQ~PQ~F~n~d~~-d~~-~n~~~~Ff~i~~~gldg~qgp~y-~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~ 511 (924)
++.||..++..|.+.. .+. ..+...++....++.+..+..+. .|+++.|||+||
T Consensus 186 ~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al----------------------- 242 (444)
T PRK14583 186 TGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRAL----------------------- 242 (444)
T ss_pred eEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHH-----------------------
Confidence 9999998776553211 111 11223333444444333333322 355555665554
Q ss_pred ccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchh
Q 002425 512 CCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTA 591 (924)
Q Consensus 512 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~ 591 (924)
+++||+
T Consensus 243 -------------------------------------------------------------------~~vGg~------- 248 (444)
T PRK14583 243 -------------------------------------------------------------------ADVGYW------- 248 (444)
T ss_pred -------------------------------------------------------------------HHcCCC-------
Confidence 567754
Q ss_pred hHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhh
Q 002425 592 SLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 671 (924)
Q Consensus 592 ~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~ 671 (924)
..+.++||++++++++.+||++.|++ +..+ ++++|+|++++++||.||++|.
T Consensus 249 --------------------------~~~~i~ED~dl~~rl~~~G~~i~~~p-~a~~-~~~~p~t~~~~~~Qr~RW~~G~ 300 (444)
T PRK14583 249 --------------------------SPDMITEDIDISWKLQLKHWSVFFEP-RGLC-WILMPETLRGLWKQRLRWAQGG 300 (444)
T ss_pred --------------------------CCCcccccHHHHHHHHHcCCeEEEee-ccEE-eeeCCCCHHHHHHHHHHHhCcH
Confidence 44689999999999999999999995 4443 8999999999999999999999
Q ss_pred HHHHHhh
Q 002425 672 VEILLSR 678 (924)
Q Consensus 672 lQil~~k 678 (924)
+|+++++
T Consensus 301 ~~~~~~~ 307 (444)
T PRK14583 301 AEVFLKN 307 (444)
T ss_pred HHHHHHH
Confidence 9999864
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.96 E-value=1.1e-27 Score=271.94 Aligned_cols=231 Identities=25% Similarity=0.329 Sum_probs=164.7
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
....|.|.|+||+|| |+ ..+.+|+.|+++++|| ++.++|.|||+++-|.+.+.+
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~-------------------- 103 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDR-------------------- 103 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHH--------------------
Confidence 356899999999999 76 6789999999999999 578999999998743221111
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+ .+ +
T Consensus 104 ----------------------------------~-------~~------------------------~----------- 107 (420)
T PRK11204 104 ----------------------------------L-------AA------------------------Q----------- 107 (420)
T ss_pred ----------------------------------H-------HH------------------------h-----------
Confidence 1 00 0
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCc
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGK 433 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~ 433 (924)
.|++.++.+++ +..||+|+|.+++ .+++||++++|+|. +++|++|++++..| .||
T Consensus 108 ----------~~~v~~i~~~~-----n~Gka~aln~g~~----~a~~d~i~~lDaD~-~~~~d~L~~l~~~~~~~~---- 163 (420)
T PRK11204 108 ----------IPRLRVIHLAE-----NQGKANALNTGAA----AARSEYLVCIDGDA-LLDPDAAAYMVEHFLHNP---- 163 (420)
T ss_pred ----------CCcEEEEEcCC-----CCCHHHHHHHHHH----HcCCCEEEEECCCC-CCChhHHHHHHHHHHhCC----
Confidence 12467777654 2459999999999 47899999999999 57999999999977 588
Q ss_pred ceEEEecCceecCCCccccccccch----hhhhhcccccccCCCc-cccccccchhhhhhcCCCCCCCCCCCCCcCCCCC
Q 002425 434 KICYVQFPQRFDGIDRHDRYSNRNV----VFFDINMKGLDGIQGP-IYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLP 508 (924)
Q Consensus 434 ~va~VQ~PQ~F~n~d~~d~~~n~~~----~Ff~i~~~gldg~qgp-~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~ 508 (924)
+++.||+..+..|... ..+..+. ..+....++....+.. ...|++++
T Consensus 164 ~v~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-------------------------- 215 (420)
T PRK11204 164 RVGAVTGNPRIRNRST--LLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITA-------------------------- 215 (420)
T ss_pred CeEEEECCceeccchh--HHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeee--------------------------
Confidence 7999999877665321 1111111 1111111111001111 11233333
Q ss_pred CccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCC
Q 002425 509 KWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGA 588 (924)
Q Consensus 509 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~ 588 (924)
+++++++++||+.+
T Consensus 216 ----------------------------------------------------------------~rr~~l~~vgg~~~-- 229 (420)
T PRK11204 216 ----------------------------------------------------------------FRKSALHEVGYWST-- 229 (420)
T ss_pred ----------------------------------------------------------------eeHHHHHHhCCCCC--
Confidence 44455567786543
Q ss_pred chhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHh
Q 002425 589 STASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWA 668 (924)
Q Consensus 589 ~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA 668 (924)
+.++||++++++++++||++.|+ |+..+ +++.|+|++++++||.||+
T Consensus 230 -------------------------------~~~~ED~~l~~rl~~~G~~i~~~-p~~~~-~~~~p~t~~~~~~Qr~RW~ 276 (420)
T PRK11204 230 -------------------------------DMITEDIDISWKLQLRGWDIRYE-PRALC-WILMPETLKGLWKQRLRWA 276 (420)
T ss_pred -------------------------------CcccchHHHHHHHHHcCCeEEec-cccEE-EeECcccHHHHHHHHHHHh
Confidence 57899999999999999999999 55444 8999999999999999999
Q ss_pred hhhHHHHHhh
Q 002425 669 LGSVEILLSR 678 (924)
Q Consensus 669 ~G~lQil~~k 678 (924)
+|++|.+++.
T Consensus 277 ~G~~~~l~~~ 286 (420)
T PRK11204 277 QGGAEVLLKN 286 (420)
T ss_pred cCHHHHHHHH
Confidence 9999999754
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.96 E-value=7.3e-28 Score=276.52 Aligned_cols=283 Identities=17% Similarity=0.197 Sum_probs=189.2
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
++.+|.|+|+||+|| |+ ..+.+||.|+++++||.+++.|+|.|||+++-|.+.+.|+
T Consensus 45 ~~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~------------------- 101 (439)
T TIGR03111 45 IGKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRA------------------- 101 (439)
T ss_pred cCCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHH-------------------
Confidence 467899999999999 76 7899999999999999999999999999988554422221
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+. .+
T Consensus 102 -----------------------------------~~-------------------------------~~---------- 105 (439)
T TIGR03111 102 -----------------------------------QN-------------------------------EF---------- 105 (439)
T ss_pred -----------------------------------HH-------------------------------hC----------
Confidence 00 01
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCc
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGK 433 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~-Dp~~g~ 433 (924)
|++ ++.+.+ +.+.||+|+|++++ .+++|||+++|+|+ +++|++|++++..|. ||
T Consensus 106 -----------~~v-~v~~~~----~~~Gka~AlN~gl~----~s~g~~v~~~DaD~-~~~~d~L~~l~~~f~~~~---- 160 (439)
T TIGR03111 106 -----------PGL-SLRYMN----SDQGKAKALNAAIY----NSIGKYIIHIDSDG-KLHKDAIKNMVTRFENNP---- 160 (439)
T ss_pred -----------CCe-EEEEeC----CCCCHHHHHHHHHH----HccCCEEEEECCCC-CcChHHHHHHHHHHHhCC----
Confidence 111 121111 13679999999999 47899999999999 579999999999775 77
Q ss_pred ceEEEecCceecCCCcccc-------ccccchhhhhhcc---ccc--ccCCCccccccccchhhhhhcCCCCCCCCCCCC
Q 002425 434 KICYVQFPQRFDGIDRHDR-------YSNRNVVFFDINM---KGL--DGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPR 501 (924)
Q Consensus 434 ~va~VQ~PQ~F~n~d~~d~-------~~n~~~~Ff~i~~---~gl--dg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~ 501 (924)
+++.|+..+.-. .+..+. +..+.. +++... .|+ ....+..++
T Consensus 161 ~v~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~------------------------ 214 (439)
T TIGR03111 161 DIHAMTGVILTD-KELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFT------------------------ 214 (439)
T ss_pred CeEEEEeEEecC-chhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEE------------------------
Confidence 676666544321 111000 000000 011000 000 000000000
Q ss_pred CcCCCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhh
Q 002425 502 KTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEA 581 (924)
Q Consensus 502 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~ 581 (924)
.-|....++++++++.
T Consensus 215 ----------------------------------------------------------------~sGa~~~~Rr~~l~~v 230 (439)
T TIGR03111 215 ----------------------------------------------------------------LSGAFSAFRRETILKT 230 (439)
T ss_pred ----------------------------------------------------------------EccHHHhhhHHHHHHh
Confidence 0134456777777888
Q ss_pred CCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHH-CCCEEEEecCCCCccccCCCCCHHHH
Q 002425 582 GGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHC-HGWRSVYCIPKRPAFKGSAPINLSDR 660 (924)
Q Consensus 582 Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~-~GwrsvY~~p~~~af~G~aP~tl~~~ 660 (924)
||+++ ++++||++++++++. .|+++.|+. +. .++.++|+|++++
T Consensus 231 ggf~~---------------------------------~~i~ED~~l~~rl~~~~g~kv~~~~-~a-~~~~~~p~t~~~~ 275 (439)
T TIGR03111 231 QLYNS---------------------------------ETVGEDTDMTFQIRELLDGKVYLCE-NA-IFYVDPIDGLNKL 275 (439)
T ss_pred CCCCC---------------------------------CCcCccHHHHHHHHHhcCCeEEECC-CC-EEEEECCcCHHHH
Confidence 87654 689999999999975 699999984 43 3589999999999
Q ss_pred HHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCccc
Q 002425 661 LHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIV 729 (924)
Q Consensus 661 l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~iv 729 (924)
++||.||++|.+|++.....+.. +++.++.+++.+...+..+...++.+++.++++++.++|.++.
T Consensus 276 ~~QR~RW~rG~~qv~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 276 YTQRQRWQRGELEVSHMFFESAN---KSIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHhccHHHHHHHHHhhhh---hchhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999965433332 3445565555443444455556777888888888888776544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.95 E-value=5.1e-26 Score=264.45 Aligned_cols=266 Identities=19% Similarity=0.199 Sum_probs=178.7
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHH-cCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSIL-AVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~l-a~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
...|.|+|+||++| |. .++.+||.|++ ++||| ++.|+|.||++++-|.+.+.|.
T Consensus 63 ~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l------------------- 117 (504)
T PRK14716 63 VPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRL------------------- 117 (504)
T ss_pred CCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHH-------------------
Confidence 34899999999999 96 79999999965 78996 6999999999887554432221
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+ +.||+
T Consensus 118 ------------------------------------------~------------------------~~~p~-------- 123 (504)
T PRK14716 118 ------------------------------------------A------------------------ARYPR-------- 123 (504)
T ss_pred ------------------------------------------H------------------------HHCCC--------
Confidence 0 12333
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhc--cccCC---CEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSA--VISNA---PYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~--~~tn~---p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
+..+. .+++| .+.||+|||.+++..- -...| ++|+++|||. +++|++|+....++.|
T Consensus 124 -------------v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~-~v~Pd~Lr~~~~~~~~- 185 (504)
T PRK14716 124 -------------VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAED-VIHPLELRLYNYLLPR- 185 (504)
T ss_pred -------------eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCC-CcCccHHHHHHhhcCC-
Confidence 22111 12222 3689999999987421 01234 9999999999 5799999976555433
Q ss_pred CCCcceEEEecCceecCCCcccc----ccccchhhhhhcccccccCCCcc-ccccccchhhhhhcCCCCCCCCCCCCCcC
Q 002425 430 TSGKKICYVQFPQRFDGIDRHDR----YSNRNVVFFDINMKGLDGIQGPI-YVGTGCVFRRQALYGYDAPVKKKPPRKTC 504 (924)
Q Consensus 430 ~~g~~va~VQ~PQ~F~n~d~~d~----~~n~~~~Ff~i~~~gldg~qgp~-y~GTg~v~RR~ALyG~~p~~~~~~~~~~~ 504 (924)
.++||.|+...+.+.+.. |..+....+...++.++.+++++ .+|+|++|||++|.-
T Consensus 186 -----~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~-------------- 246 (504)
T PRK14716 186 -----HDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALER-------------- 246 (504)
T ss_pred -----CCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHH--------------
Confidence 458999988765443322 22222222333456667777653 679999999988720
Q ss_pred CCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCC
Q 002425 505 NCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGV 584 (924)
Q Consensus 505 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~ 584 (924)
...+.||.
T Consensus 247 ------------------------------------------------------------------------l~~~~GG~ 254 (504)
T PRK14716 247 ------------------------------------------------------------------------LAAERGGQ 254 (504)
T ss_pred ------------------------------------------------------------------------HHhhcCCC
Confidence 00122331
Q ss_pred CCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCC-------------Ccccc
Q 002425 585 PTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR-------------PAFKG 651 (924)
Q Consensus 585 ~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~-------------~af~G 651 (924)
+|..+++|||+++|++++.+|||++|++..+ .++++
T Consensus 255 -------------------------------~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e 303 (504)
T PRK14716 255 -------------------------------PFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATRE 303 (504)
T ss_pred -------------------------------CCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccccc
Confidence 2667899999999999999999999995431 12458
Q ss_pred CCCCCHHHHHHHHHHHhhhh-HHHHHhhc--cccccccCCCCCcccceeeeccch
Q 002425 652 SAPINLSDRLHQVLRWALGS-VEILLSRH--CPIWYGYGCGLKPLERFSYINSVV 703 (924)
Q Consensus 652 ~aP~tl~~~l~QR~RWA~G~-lQil~~k~--~Pl~~g~~~~L~~~QRL~Yl~~~l 703 (924)
++|+|++++++||.||+.|. +|...+.- .++. .+-+.|++|.+.+...+
T Consensus 304 ~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~---~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 304 FFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA---TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred cCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh---hhhhHHHHHHHHHHHHH
Confidence 89999999999999999995 78874321 1111 23466777776555433
No 20
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.94 E-value=9.9e-26 Score=232.24 Aligned_cols=229 Identities=37% Similarity=0.608 Sum_probs=176.7
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||+|| |++..+..++.|+++++||.+++.++|+|||.++-|.+-+.
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~------------------------- 52 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAA------------------------- 52 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHH-------------------------
Confidence 67999999999 88889999999999999999889999999998763222100
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
++ .. ++
T Consensus 53 -----------------------------~~-------~~-----------------------~~--------------- 58 (234)
T cd06421 53 -----------------------------EL-------GV-----------------------EY--------------- 58 (234)
T ss_pred -----------------------------Hh-------hc-----------------------cc---------------
Confidence 01 00 00
Q ss_pred cccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcC-CCCCcceEE
Q 002425 359 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMD-PTSGKKICY 437 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~D-p~~g~~va~ 437 (924)
++.|+.+++ +.+.|+||+|.+++ ..+++||+.+|+|.+ .+|++|.+.+..|.+ | +++.
T Consensus 59 --------~~~~~~~~~----~~~~~~~~~n~~~~----~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~----~~~~ 117 (234)
T cd06421 59 --------GYRYLTRPD----NRHAKAGNLNNALA----HTTGDFVAILDADHV-PTPDFLRRTLGYFLDDP----KVAL 117 (234)
T ss_pred --------CceEEEeCC----CCCCcHHHHHHHHH----hCCCCEEEEEccccC-cCccHHHHHHHHHhcCC----CeEE
Confidence 245666655 56789999999999 468999999999995 689999999998876 6 7999
Q ss_pred EecCceecCCCccc----cccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcccc
Q 002425 438 VQFPQRFDGIDRHD----RYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCC 513 (924)
Q Consensus 438 VQ~PQ~F~n~d~~d----~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~ 513 (924)
||+++.+.+.+..+ .+......|+.....+...+....+.|++.++||+++
T Consensus 118 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~------------------------- 172 (234)
T cd06421 118 VQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREAL------------------------- 172 (234)
T ss_pred EecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHH-------------------------
Confidence 99999998776542 2233344555555555444455666777777776655
Q ss_pred ccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhH
Q 002425 514 CCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASL 593 (924)
Q Consensus 514 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~ 593 (924)
+++||++.
T Consensus 173 -----------------------------------------------------------------~~ig~~~~------- 180 (234)
T cd06421 173 -----------------------------------------------------------------DEIGGFPT------- 180 (234)
T ss_pred -----------------------------------------------------------------HHhCCCCc-------
Confidence 45677653
Q ss_pred HHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHH
Q 002425 594 LNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVE 673 (924)
Q Consensus 594 ~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQ 673 (924)
..+.||++++++++.+||+++|++. ..+ ++..|.++.++++||.||.+|++|
T Consensus 181 --------------------------~~~~eD~~l~~r~~~~g~~i~~~~~-~~~-~~~~~~~~~~~~~q~~rw~~~~~~ 232 (234)
T cd06421 181 --------------------------DSVTEDLATSLRLHAKGWRSVYVPE-PLA-AGLAPETLAAYIKQRLRWARGMLQ 232 (234)
T ss_pred --------------------------cceeccHHHHHHHHHcCceEEEecC-ccc-cccCCccHHHHHHHHHHHhcCCee
Confidence 3668999999999999999999954 443 899999999999999999999998
Q ss_pred HH
Q 002425 674 IL 675 (924)
Q Consensus 674 il 675 (924)
++
T Consensus 233 ~~ 234 (234)
T cd06421 233 IL 234 (234)
T ss_pred eC
Confidence 64
No 21
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=1e-24 Score=262.77 Aligned_cols=241 Identities=20% Similarity=0.301 Sum_probs=169.8
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHH-cCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSIL-AVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~l-a~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
...|+|.|+||++| |. .++.+|+.+++ ++|||. +.|+|.||+.++-|.+.+.+
T Consensus 60 ~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~-------------------- 113 (727)
T PRK11234 60 PDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDA-------------------- 113 (727)
T ss_pred CCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHH--------------------
Confidence 56799999999999 97 79999999987 799996 89999977665533332221
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+ + +.||++
T Consensus 114 ----------------------------------l-------~------------------------~~~p~~------- 121 (727)
T PRK11234 114 ----------------------------------V-------C------------------------ARFPNV------- 121 (727)
T ss_pred ----------------------------------H-------H------------------------HHCCCc-------
Confidence 1 0 011211
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccc---cCC--CEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVI---SNA--PYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~---tn~--p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
+++.+.| || .+.||+|||.++....-. +.+ +.++++|||. +++|++|+ .+.++.++
T Consensus 122 ------------~~v~~~~---~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~-~v~pd~L~-~~~~l~~~ 182 (727)
T PRK11234 122 ------------HKVVCAR---PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAED-VISPMELR-LFNYLVER 182 (727)
T ss_pred ------------EEEEeCC---CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCC-CCChhHHH-HHHhhcCC
Confidence 1333333 32 358999999998853101 133 5688899998 58999998 67788887
Q ss_pred CCCcceEEEecCceecCCCcccc----ccccchhhhhhcccccccCCCc-cccccccchhhhhhcCCCCCCCCCCCCCcC
Q 002425 430 TSGKKICYVQFPQRFDGIDRHDR----YSNRNVVFFDINMKGLDGIQGP-IYVGTGCVFRRQALYGYDAPVKKKPPRKTC 504 (924)
Q Consensus 430 ~~g~~va~VQ~PQ~F~n~d~~d~----~~n~~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~ 504 (924)
+ ++||.|..-.+...+.. |..+....+...+++++.++|+ .+.|+|++|.|+++
T Consensus 183 ----~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l---------------- 241 (727)
T PRK11234 183 ----K-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAV---------------- 241 (727)
T ss_pred ----C-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccH----------------
Confidence 4 89999966333222221 2334444455667888888665 56788888844332
Q ss_pred CCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhC-C
Q 002425 505 NCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAG-G 583 (924)
Q Consensus 505 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~G-g 583 (924)
+++.+.| |
T Consensus 242 -----------------------------------------------------------------------~al~~~ggg 250 (727)
T PRK11234 242 -----------------------------------------------------------------------TALLEDGDG 250 (727)
T ss_pred -----------------------------------------------------------------------HHHHHhcCC
Confidence 2334555 4
Q ss_pred CCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCC------------------
Q 002425 584 VPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPK------------------ 645 (924)
Q Consensus 584 ~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~------------------ 645 (924)
+ +|..+++|||+++|++|+.+||+++|++..
T Consensus 251 ~-------------------------------~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~ 299 (727)
T PRK11234 251 I-------------------------------AFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHAR 299 (727)
T ss_pred C-------------------------------CcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccc
Confidence 3 588899999999999999999999999611
Q ss_pred ---CCccccCCCCCHHHHHHHHHHHhhh-hHHHHH
Q 002425 646 ---RPAFKGSAPINLSDRLHQVLRWALG-SVEILL 676 (924)
Q Consensus 646 ---~~af~G~aP~tl~~~l~QR~RWA~G-~lQil~ 676 (924)
..+++++.|+|+++.++||.||.+| .+|.+.
T Consensus 300 ~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 300 TSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 1336788999999999999999999 688875
No 22
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.93 E-value=5.8e-25 Score=228.74 Aligned_cols=228 Identities=22% Similarity=0.316 Sum_probs=162.1
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||+|| |. ..+..++.|+++++||.+++.|+|+|| +++-|.+.+.+.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~----------------------- 52 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREI----------------------- 52 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHH-----------------------
Confidence 57999999998 85 678999999999999999999999998 666454433321
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
..++..
T Consensus 53 ---------------------------~~~~~~----------------------------------------------- 58 (232)
T cd06437 53 ---------------------------VEEYAA----------------------------------------------- 58 (232)
T ss_pred ---------------------------HHHHhh-----------------------------------------------
Confidence 001000
Q ss_pred cccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002425 359 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 438 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~V 438 (924)
.-+++.++.+.++ .++|++|+|.+++ ..+++||+++|+|.+ ++|++|+++..++.|| ++++|
T Consensus 59 -----~~~~i~~~~~~~~----~G~k~~a~n~g~~----~a~~~~i~~~DaD~~-~~~~~l~~~~~~~~~~----~v~~v 120 (232)
T cd06437 59 -----QGVNIKHVRRADR----TGYKAGALAEGMK----VAKGEYVAIFDADFV-PPPDFLQKTPPYFADP----KLGFV 120 (232)
T ss_pred -----cCCceEEEECCCC----CCCchHHHHHHHH----hCCCCEEEEEcCCCC-CChHHHHHhhhhhcCC----CeEEE
Confidence 0024777877764 4579999999999 579999999999995 7999999977788888 79999
Q ss_pred ecCceecCCCccc--ccc-ccchhhhhhcccccccCCCc-cccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccc
Q 002425 439 QFPQRFDGIDRHD--RYS-NRNVVFFDINMKGLDGIQGP-IYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCC 514 (924)
Q Consensus 439 Q~PQ~F~n~d~~d--~~~-n~~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c 514 (924)
|.+..+.|.+.+- ++. -....++.....+....... ..+|++++|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------------------------------- 169 (232)
T cd06437 121 QTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVW------------------------------- 169 (232)
T ss_pred ecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhh-------------------------------
Confidence 9987766544321 110 01111222222222211111 123444444
Q ss_pred cccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHH
Q 002425 515 CRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLL 594 (924)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~ 594 (924)
++++++++||+++
T Consensus 170 -----------------------------------------------------------rr~~~~~vgg~~~-------- 182 (232)
T cd06437 170 -----------------------------------------------------------RKECIEDAGGWNH-------- 182 (232)
T ss_pred -----------------------------------------------------------hHHHHHHhCCCCC--------
Confidence 4455567887754
Q ss_pred HHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhh
Q 002425 595 NEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 671 (924)
Q Consensus 595 ~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~ 671 (924)
.++.||++++++++.+||+++|+ |+.. ++...|+|+.++++||+||++|.
T Consensus 183 -------------------------~~~~ED~~l~~rl~~~G~~~~~~-~~~~-v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 183 -------------------------DTLTEDLDLSYRAQLKGWKFVYL-DDVV-VPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred -------------------------CcchhhHHHHHHHHHCCCeEEEe-ccce-eeeeCCcCHHHHHHHHHHhccCC
Confidence 46789999999999999999999 5544 48999999999999999999984
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.92 E-value=9.6e-24 Score=219.19 Aligned_cols=173 Identities=29% Similarity=0.441 Sum_probs=121.3
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCC
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGI 447 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~ 447 (924)
+.++..++ +.+.|+||+|.+++... .+++||+.+|+|. +..|++|.+++.+|.+| +++.||+++.+.+.
T Consensus 58 i~~i~~~~----~~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~-~~~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~ 126 (236)
T cd06435 58 FRFFHVEP----LPGAKAGALNYALERTA--PDAEIIAVIDADY-QVEPDWLKRLVPIFDDP----RVGFVQAPQDYRDG 126 (236)
T ss_pred EEEEEcCC----CCCCchHHHHHHHHhcC--CCCCEEEEEcCCC-CcCHHHHHHHHHHhcCC----CeeEEecCccccCC
Confidence 55666554 35679999999999532 4589999999998 57999999999998877 79999998765432
Q ss_pred Ccccccc----ccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccccc
Q 002425 448 DRHDRYS----NRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKK 523 (924)
Q Consensus 448 d~~d~~~----n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 523 (924)
... .+. -....+|...++.....+.....|+++++||
T Consensus 127 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr-------------------------------------- 167 (236)
T cd06435 127 EES-LFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRR-------------------------------------- 167 (236)
T ss_pred Ccc-HHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEH--------------------------------------
Confidence 211 110 0001111112222222222233444444444
Q ss_pred ccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhcc
Q 002425 524 GKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISC 603 (924)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc 603 (924)
++++++||+++
T Consensus 168 ----------------------------------------------------~~~~~iGgf~~----------------- 178 (236)
T cd06435 168 ----------------------------------------------------SALDDVGGWDE----------------- 178 (236)
T ss_pred ----------------------------------------------------HHHHHhCCCCC-----------------
Confidence 44567887754
Q ss_pred ccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHHh
Q 002425 604 GYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLS 677 (924)
Q Consensus 604 ~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~ 677 (924)
....||++++++++.+||++.|++ ...+ +...|+++.++++||.||++|++|++.+
T Consensus 179 ----------------~~~~eD~dl~~r~~~~G~~~~~~~-~~~~-~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 179 ----------------WCITEDSELGLRMHEAGYIGVYVA-QSYG-HGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred ----------------ccccchHHHHHHHHHCCcEEEEcc-hhhc-cCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 356899999999999999999994 4443 8999999999999999999999999964
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.92 E-value=8.1e-24 Score=222.29 Aligned_cols=232 Identities=23% Similarity=0.303 Sum_probs=164.3
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||+|| |+ ..+..|+.|+++++||.+++.|.|.|||+++-|.+-+.+
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~------------------------ 52 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA------------------------ 52 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH------------------------
Confidence 67999999999 86 788999999999999988899999999988744331111
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
|.. + +
T Consensus 53 ---------------------------~~~---------------~-------------------~-------------- 57 (241)
T cd06427 53 ---------------------------LRL---------------P-------------------S-------------- 57 (241)
T ss_pred ---------------------------hcc---------------C-------------------C--------------
Confidence 000 0 0
Q ss_pred cccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002425 359 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 438 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~V 438 (924)
-.+++++.+.+ ...|++|+|++++ .++|+||+.+|+|.. ..|++|.+++.+|.+. ..++++|
T Consensus 58 ------~~~i~~~~~~~-----~~G~~~a~n~g~~----~a~gd~i~~~DaD~~-~~~~~l~~~~~~~~~~--~~~v~~~ 119 (241)
T cd06427 58 ------IFRVVVVPPSQ-----PRTKPKACNYALA----FARGEYVVIYDAEDA-PDPDQLKKAVAAFARL--DDKLACV 119 (241)
T ss_pred ------CeeEEEecCCC-----CCchHHHHHHHHH----hcCCCEEEEEcCCCC-CChHHHHHHHHHHHhc--CCCEEEE
Confidence 01244443322 3479999999999 579999999999995 7899999999988621 1289999
Q ss_pred ecCceecCCCccc---cccccchhhhhhcccccccCCCcc-ccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccc
Q 002425 439 QFPQRFDGIDRHD---RYSNRNVVFFDINMKGLDGIQGPI-YVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCC 514 (924)
Q Consensus 439 Q~PQ~F~n~d~~d---~~~n~~~~Ff~i~~~gldg~qgp~-y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c 514 (924)
|.+..+++...+- .+..+...+|+..+++....+.+. +.|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------------------------------- 165 (241)
T cd06427 120 QAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTS---------------------------------- 165 (241)
T ss_pred eCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCch----------------------------------
Confidence 9998887643221 011111122233333333222221 12333
Q ss_pred cccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHH
Q 002425 515 CRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLL 594 (924)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~ 594 (924)
..+++++++++||+.+
T Consensus 166 --------------------------------------------------------~~~rr~~~~~vgg~~~-------- 181 (241)
T cd06427 166 --------------------------------------------------------NHFRTDVLRELGGWDP-------- 181 (241)
T ss_pred --------------------------------------------------------HHhhHHHHHHcCCCCc--------
Confidence 3445556677887643
Q ss_pred HHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHH
Q 002425 595 NEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 674 (924)
Q Consensus 595 ~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQi 674 (924)
...+||++++++++.+||+++|+ +.. ++...|+|++++++||.||+.|.+|+
T Consensus 182 -------------------------~~~~eD~~l~~rl~~~G~r~~~~-~~~--~~~~~~~~~~~~~~q~~Rw~~g~~~~ 233 (241)
T cd06427 182 -------------------------FNVTEDADLGLRLARAGYRTGVL-NST--TLEEANNALGNWIRQRSRWIKGYMQT 233 (241)
T ss_pred -------------------------ccchhhHHHHHHHHHCCceEEEe-ccc--ccccCcHhHHHHHHHHHHHhccHHHH
Confidence 36789999999999999999999 443 37899999999999999999999999
Q ss_pred HHh
Q 002425 675 LLS 677 (924)
Q Consensus 675 l~~ 677 (924)
+..
T Consensus 234 ~~~ 236 (241)
T cd06427 234 WLV 236 (241)
T ss_pred HHH
Confidence 964
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.89 E-value=4.8e-24 Score=219.96 Aligned_cols=224 Identities=28% Similarity=0.428 Sum_probs=136.1
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||++| |+ ..+..|+.|+++++|| ++.++|+||+.++-|.+.+.
T Consensus 1 P~v~Vvip~~~---~~-~~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~------------------------- 49 (228)
T PF13641_consen 1 PRVSVVIPAYN---ED-DVLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILR------------------------- 49 (228)
T ss_dssp --EEEE--BSS----H-HHHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHH-------------------------
T ss_pred CEEEEEEEecC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHH-------------------------
Confidence 77999999998 76 4999999999999995 49999999998763221111
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
+ +++ .+|+
T Consensus 50 -----------------------------~-------~~~------------------------~~~~------------ 57 (228)
T PF13641_consen 50 -----------------------------A-------LAA------------------------RYPR------------ 57 (228)
T ss_dssp -----------------------------H-------HHH------------------------TTGG------------
T ss_pred -----------------------------H-------HHH------------------------HcCC------------
Confidence 1 110 0110
Q ss_pred cccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002425 359 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 438 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~V 438 (924)
-++.++.+.+++| ...|++|+|.+++. ..+++|+++|+|.. ++|++|++++.+|.|| +++.|
T Consensus 58 -------~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~-~~p~~l~~~~~~~~~~----~~~~v 119 (228)
T PF13641_consen 58 -------VRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTV-LDPDWLERLLAAFADP----GVGAV 119 (228)
T ss_dssp --------GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEE-E-CHHHHHHHHHHHBS----S--EE
T ss_pred -------CceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcE-ECHHHHHHHHHHHHhC----CCCeE
Confidence 0266777665321 24799999999994 67999999999995 6999999999988888 79999
Q ss_pred ecCceecCCCccccccccchhhhh----hcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccc
Q 002425 439 QFPQRFDGIDRHDRYSNRNVVFFD----INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCC 514 (924)
Q Consensus 439 Q~PQ~F~n~d~~d~~~n~~~~Ff~----i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c 514 (924)
|++..+++ +.+ .+..-...++. ....+....+.+.++|++++|||+++
T Consensus 120 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~-------------------------- 171 (228)
T PF13641_consen 120 GGPVFPDN-DRN-WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSAL-------------------------- 171 (228)
T ss_dssp EEEEEETT-CCC-EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHH--------------------------
T ss_pred eeeEeecC-CCC-HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHH--------------------------
Confidence 98887665 322 12211222221 12233344455666788888888665
Q ss_pred cccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHH
Q 002425 515 CRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLL 594 (924)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~ 594 (924)
+++||+.+
T Consensus 172 ----------------------------------------------------------------~~~g~fd~-------- 179 (228)
T PF13641_consen 172 ----------------------------------------------------------------EEVGGFDP-------- 179 (228)
T ss_dssp ----------------------------------------------------------------HHH-S--S--------
T ss_pred ----------------------------------------------------------------HHhCCCCC--------
Confidence 45676543
Q ss_pred HHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhh
Q 002425 595 NEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 670 (924)
Q Consensus 595 ~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G 670 (924)
....||.++++++..+||++.|++ +.. ++...|.+++++++||.||+.|
T Consensus 180 -------------------------~~~~eD~~l~~r~~~~G~~~~~~~-~~~-v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 180 -------------------------FILGEDFDLCLRLRAAGWRIVYAP-DAL-VYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp -------------------------SSSSHHHHHHHHHHHTT--EEEEE-EEE-EEE--SSSTHHHHHHHHHHH--
T ss_pred -------------------------CCcccHHHHHHHHHHCCCcEEEEC-CcE-EEEeCCCCHHHHHHHHhccCcC
Confidence 467799999999999999999994 443 4899999999999999999987
No 26
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.86 E-value=6.4e-20 Score=219.46 Aligned_cols=172 Identities=19% Similarity=0.273 Sum_probs=125.8
Q ss_pred CCCchhhhHHHHHhh---ccccCCCE--EEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCce-ecCCCcc---c
Q 002425 381 HHKKAGAMNALIRVS---AVISNAPY--LLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQR-FDGIDRH---D 451 (924)
Q Consensus 381 hh~KAGalN~llrvs---~~~tn~p~--il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~-F~n~d~~---d 451 (924)
...||.|||.++... .-.+.++| |+++|||. +++|++|+. |-++.+. + .+||.|-. ..|...+ .
T Consensus 139 p~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd-~~~P~~L~~-~~~~~~~----~-~~iQ~pV~~~~~~~~~~l~~ 211 (703)
T PRK15489 139 PTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSED-VLHPLELKY-FNYLLPR----K-DLVQLPVLSLERKWYEWVAG 211 (703)
T ss_pred CCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCC-CCChhHHHH-HHhhcCC----c-ceeeeeeccCCCccccHHHH
Confidence 467999999988742 11224455 99999999 689999986 4666544 1 36998832 2222111 2
Q ss_pred cccccchhhhhhcccccccCCCccc-cccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCcCC
Q 002425 452 RYSNRNVVFFDINMKGLDGIQGPIY-VGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKN 530 (924)
Q Consensus 452 ~~~n~~~~Ff~i~~~gldg~qgp~y-~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 530 (924)
-|..+....++..++++..+.+++. .|||++|||.||-.
T Consensus 212 ~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~---------------------------------------- 251 (703)
T PRK15489 212 TYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA---------------------------------------- 251 (703)
T ss_pred HHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH----------------------------------------
Confidence 3667777888888999988888765 67899999988720
Q ss_pred CcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccc
Q 002425 531 KDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTD 610 (924)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~ 610 (924)
+.+.||..
T Consensus 252 -----------------------------------------------l~~~gg~~------------------------- 259 (703)
T PRK15489 252 -----------------------------------------------LMKERGNQ------------------------- 259 (703)
T ss_pred -----------------------------------------------HHHhcCCC-------------------------
Confidence 12334321
Q ss_pred cccccCcccccccchHHHHHHHHHCCCEEEEec---------------------CCCCccccCCCCCHHHHHHHHHHHhh
Q 002425 611 WGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCI---------------------PKRPAFKGSAPINLSDRLHQVLRWAL 669 (924)
Q Consensus 611 wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~---------------------p~~~af~G~aP~tl~~~l~QR~RWA~ 669 (924)
+|..+++|||+++|+||+.+|||+.|+. ....++++..|.|+.+.++||.||..
T Consensus 260 -----~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~ 334 (703)
T PRK15489 260 -----PFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVL 334 (703)
T ss_pred -----CCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHh
Confidence 5778999999999999999999999932 11355688999999999999999999
Q ss_pred hhH-HHHH
Q 002425 670 GSV-EILL 676 (924)
Q Consensus 670 G~l-Qil~ 676 (924)
|-. |...
T Consensus 335 Gi~~q~~~ 342 (703)
T PRK15489 335 GIAFQGWE 342 (703)
T ss_pred HHHHhhHH
Confidence 987 7653
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.85 E-value=2.1e-21 Score=205.79 Aligned_cols=166 Identities=17% Similarity=0.093 Sum_probs=106.4
Q ss_pred ccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEEEecCceecCCCcccc--ccc-cchhhhhhcccccccCC-
Q 002425 398 ISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICYVQFPQRFDGIDRHDR--YSN-RNVVFFDINMKGLDGIQ- 472 (924)
Q Consensus 398 ~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~va~VQ~PQ~F~n~d~~d~--~~n-~~~~Ff~i~~~gldg~q- 472 (924)
.++++||+++|+|. +.+|++|++++..| .|| +++.||..+...|...+-. +.+ +....+-....+....+
T Consensus 71 ~a~~e~i~~~DaD~-~~~~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~~~~~~s~~g~ 145 (244)
T cd04190 71 PDDPEFILLVDADT-KFDPDSIVQLYKAMDKDP----EIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWLDKAFESVFGF 145 (244)
T ss_pred cCCCCEEEEECCCC-cCCHhHHHHHHHHHHhCC----CEEEEEeeeEEcCCcchhHHHhHheehhhhhhhcccHHHcCCc
Confidence 47899999999999 47999999999877 688 7999999988876543211 111 00010111111122222
Q ss_pred CccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhccccccc
Q 002425 473 GPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDN 552 (924)
Q Consensus 473 gp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (924)
.....|++.+|||+||..... .|.. ..|++.+
T Consensus 146 ~~~~~G~~~~~R~~~l~~~~~------------~~~~--~~~~~~~---------------------------------- 177 (244)
T cd04190 146 VTCLPGCFSMYRIEALKGDNG------------GKGP--LLDYAYL---------------------------------- 177 (244)
T ss_pred eEECCCceEEEEehhhcCCcc------------cccc--chhhccc----------------------------------
Confidence 234568888899998853210 0000 0000000
Q ss_pred ccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHH
Q 002425 553 EKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKM 632 (924)
Q Consensus 553 ~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL 632 (924)
++++.+ |+ +....+++||.+++++|
T Consensus 178 ----------------------~~~~~~-~~--------------------------------~~~~~~~~ED~~l~~~l 202 (244)
T cd04190 178 ----------------------TNTVDS-LH--------------------------------KKNNLDLGEDRILCTLL 202 (244)
T ss_pred ----------------------cCcccc-hH--------------------------------HHHHHhHhcccceeHHH
Confidence 001111 10 11234789999999999
Q ss_pred HHCCCEEEE--ecCCCCccccCCCCCHHHHHHHHHHHhhhhHH
Q 002425 633 HCHGWRSVY--CIPKRPAFKGSAPINLSDRLHQVLRWALGSVE 673 (924)
Q Consensus 633 ~~~GwrsvY--~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQ 673 (924)
..+||++.| + |+..+ +.++|+|++++++||+||++|++.
T Consensus 203 ~~~G~~~~~~~~-~~a~~-~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 203 LKAGPKRKYLYV-PGAVA-ETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred hccCCccEEEEe-cccEE-EEECCCCHHHHHHHhHhhhccccc
Confidence 999999999 7 44443 899999999999999999999864
No 28
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.84 E-value=4e-20 Score=208.26 Aligned_cols=235 Identities=17% Similarity=0.224 Sum_probs=155.4
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCC
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRA 275 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepra 275 (924)
...|.|.|+||++| |++ .+.+++.|++++|||. +.|+|.||++++-|.+.+.+
T Consensus 38 ~~~p~VSViiP~~n---ee~-~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~--------------------- 90 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DEP-ELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRR--------------------- 90 (373)
T ss_pred CCCCCeEEEEECCC---CCh-hHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHH---------------------
Confidence 34799999999999 875 5789999999999996 88999999887643331111
Q ss_pred chhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCC
Q 002425 276 PEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQN 355 (924)
Q Consensus 276 Pe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~ 355 (924)
++ + +||+
T Consensus 91 ---------------------------------~~-------~------------------------~~p~--------- 97 (373)
T TIGR03472 91 ---------------------------------LR-------A------------------------DFPD--------- 97 (373)
T ss_pred ---------------------------------HH-------H------------------------hCCC---------
Confidence 10 0 1111
Q ss_pred CcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcce
Q 002425 356 GVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKI 435 (924)
Q Consensus 356 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~v 435 (924)
.++.++.+.++.| .+.|++|+|++++ .+++|+|+.+|+|. ++.|++|++++..|.|| ++
T Consensus 98 ----------~~i~~v~~~~~~G--~~~K~~~l~~~~~----~a~ge~i~~~DaD~-~~~p~~L~~lv~~~~~~----~v 156 (373)
T TIGR03472 98 ----------ADIDLVIDARRHG--PNRKVSNLINMLP----HARHDILVIADSDI-SVGPDYLRQVVAPLADP----DV 156 (373)
T ss_pred ----------CceEEEECCCCCC--CChHHHHHHHHHH----hccCCEEEEECCCC-CcChhHHHHHHHHhcCC----Cc
Confidence 1255554443222 4579999999887 57999999999998 57999999999999998 79
Q ss_pred EEEecCceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcccccc
Q 002425 436 CYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCC 515 (924)
Q Consensus 436 a~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~ 515 (924)
+.|+.+.... +... +.++... ...+.. ++-+ ....+ ..|.
T Consensus 157 ~~V~~~~~~~--~~~~-~~~~l~~------~~~~~~---~~~~--~~~~~--~~~~------------------------ 196 (373)
T TIGR03472 157 GLVTCLYRGR--PVPG-FWSRLGA------MGINHN---FLPS--VMVAR--ALGR------------------------ 196 (373)
T ss_pred ceEeccccCC--CCCC-HHHHHHH------HHhhhh---hhHH--HHHHH--hccC------------------------
Confidence 9999864422 1111 1111000 000000 0000 00000 0000
Q ss_pred ccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHH
Q 002425 516 RSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLN 595 (924)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ 595 (924)
.....|++..+++++++++||++..
T Consensus 197 -----------------------------------------------~~~~~G~~~a~RR~~l~~iGGf~~~-------- 221 (373)
T TIGR03472 197 -----------------------------------------------ARFCFGATMALRRATLEAIGGLAAL-------- 221 (373)
T ss_pred -----------------------------------------------CccccChhhheeHHHHHHcCChHHh--------
Confidence 0012356667777888899988531
Q ss_pred HHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhh
Q 002425 596 EAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 671 (924)
Q Consensus 596 ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~ 671 (924)
..+++||++++.++..+||++.|.+ .... ....|+|++++++||.||++..
T Consensus 222 -----------------------~~~~~ED~~l~~~i~~~G~~v~~~~-~~v~-~~~~~~s~~~~~~q~~RW~r~~ 272 (373)
T TIGR03472 222 -----------------------AHHLADDYWLGELVRALGLRVVLAP-VVVD-TDVHETSFATLLAHELRWSRTI 272 (373)
T ss_pred -----------------------cccchHHHHHHHHHHHcCCeEEecc-hhhh-cCCCccCHHHHHHHHHHHHhhh
Confidence 1467899999999999999999984 4333 6788899999999999997443
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.83 E-value=8.5e-20 Score=186.88 Aligned_cols=226 Identities=17% Similarity=0.214 Sum_probs=151.6
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhhhhh
Q 002425 203 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQ 282 (924)
Q Consensus 203 vfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~yF~~ 282 (924)
|+||||| |+ ..+.+||.|++.++||.+++.|+|.|||+++-|.+.+.
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~----------------------------- 47 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE----------------------------- 47 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-----------------------------
Confidence 6899998 75 78999999999999999899999999998763322111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcccccC
Q 002425 283 KLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEG 362 (924)
Q Consensus 283 ~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~~~ 362 (924)
|.. + +
T Consensus 48 -----------------------~~~----------~------------------------~------------------ 52 (229)
T cd04192 48 -----------------------FAA----------A------------------------K------------------ 52 (229)
T ss_pred -----------------------HHH----------h------------------------C------------------
Confidence 000 0 0
Q ss_pred CccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCc
Q 002425 363 NLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQ 442 (924)
Q Consensus 363 ~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ 442 (924)
..+++.++.++. + ....|+.++|.++. .++++||+++|+|. ++.|++|++.+..+.++ ..+.|+.++
T Consensus 53 -~~~~v~~~~~~~-~--~~~g~~~a~n~g~~----~~~~d~i~~~D~D~-~~~~~~l~~l~~~~~~~----~~~~v~~~~ 119 (229)
T cd04192 53 -PNFQLKILNNSR-V--SISGKKNALTTAIK----AAKGDWIVTTDADC-VVPSNWLLTFVAFIQKE----QIGLVAGPV 119 (229)
T ss_pred -CCcceEEeeccC-c--ccchhHHHHHHHHH----HhcCCEEEEECCCc-ccCHHHHHHHHHHhhcC----CCcEEeeee
Confidence 012355555543 1 24688999999998 47899999999999 57899999999977666 577899988
Q ss_pred eecCCCcc-ccccccchhhhhhcccccccCCCc-cccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccc
Q 002425 443 RFDGIDRH-DRYSNRNVVFFDINMKGLDGIQGP-IYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKK 520 (924)
Q Consensus 443 ~F~n~d~~-d~~~n~~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~ 520 (924)
.+...+.. ..+..-...+......+..+++.+ ...|++.++|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r------------------------------------ 163 (229)
T cd04192 120 IYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYR------------------------------------ 163 (229)
T ss_pred eecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEE------------------------------------
Confidence 87622211 111110000011111111112211 1223333344
Q ss_pred cccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHh
Q 002425 521 SKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHV 600 (924)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v 600 (924)
+++++++||+++.
T Consensus 164 ------------------------------------------------------r~~~~~~ggf~~~------------- 176 (229)
T cd04192 164 ------------------------------------------------------KEAFFEVGGFEGN------------- 176 (229)
T ss_pred ------------------------------------------------------HHHHHHhcCCccc-------------
Confidence 4455678887641
Q ss_pred hccccccccccccccCcccccccchHHHHHHHHHCCC-EEEEecCCCCccccCCCCCHHHHHHHHHHHhhh
Q 002425 601 ISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGW-RSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 670 (924)
Q Consensus 601 ~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~Gw-rsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G 670 (924)
....+||.++.+++..+|| ++.|+......++...|.++.++++||+||++|
T Consensus 177 ------------------~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 177 ------------------DHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred ------------------cccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 2366899999999999999 998874322334899999999999999999987
No 30
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.83 E-value=1.4e-19 Score=184.58 Aligned_cols=195 Identities=18% Similarity=0.238 Sum_probs=145.6
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||+|| |.. .+..++-|+++++||. +.++|.|||+++-|.+.+.+
T Consensus 1 p~vsviip~~n---~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~------------------------ 50 (196)
T cd02520 1 PGVSILKPLCG---VDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRK------------------------ 50 (196)
T ss_pred CCeEEEEecCC---CCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHH------------------------
Confidence 67999999999 765 4789999999999986 89999999998744332211
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
+.+ .||.+
T Consensus 51 -------------------------------------~~~------------------------~~~~~----------- 58 (196)
T cd02520 51 -------------------------------------LIA------------------------KYPNV----------- 58 (196)
T ss_pred -------------------------------------HHH------------------------HCCCC-----------
Confidence 000 01100
Q ss_pred cccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE
Q 002425 359 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV 438 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~V 438 (924)
++.|+..+++.| ...|++|+|.+++ ..+++|++++|+|. +..|++|++.+..+.+| +++.|
T Consensus 59 --------~~~~~~~~~~~g--~~~~~~~~n~g~~----~a~~d~i~~~D~D~-~~~~~~l~~l~~~~~~~----~~~~v 119 (196)
T cd02520 59 --------DARLLIGGEKVG--INPKVNNLIKGYE----EARYDILVISDSDI-SVPPDYLRRMVAPLMDP----GVGLV 119 (196)
T ss_pred --------cEEEEecCCcCC--CCHhHHHHHHHHH----hCCCCEEEEECCCc-eEChhHHHHHHHHhhCC----CCCeE
Confidence 133444433212 3468999999999 57899999999998 46899999999988888 57788
Q ss_pred ecCceecCCCccccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccc
Q 002425 439 QFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSR 518 (924)
Q Consensus 439 Q~PQ~F~n~d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~ 518 (924)
+.. ...|+++++||+++
T Consensus 120 ~~~---------------------------------~~~g~~~~~r~~~~------------------------------ 136 (196)
T cd02520 120 TCL---------------------------------CAFGKSMALRREVL------------------------------ 136 (196)
T ss_pred Eee---------------------------------cccCceeeeEHHHH------------------------------
Confidence 765 45677888888766
Q ss_pred cccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHH
Q 002425 519 KKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAI 598 (924)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~ 598 (924)
+++||++.
T Consensus 137 ------------------------------------------------------------~~~ggf~~------------ 144 (196)
T cd02520 137 ------------------------------------------------------------DAIGGFEA------------ 144 (196)
T ss_pred ------------------------------------------------------------HhccChHH------------
Confidence 34566532
Q ss_pred HhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhh
Q 002425 599 HVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 670 (924)
Q Consensus 599 ~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G 670 (924)
....+.||+++++++..+||++.|+. ... ++...|.+++++++||.||++.
T Consensus 145 -------------------~~~~~~eD~~l~~rl~~~G~~i~~~~-~~~-~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 145 -------------------FADYLAEDYFLGKLIWRLGYRVVLSP-YVV-MQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -------------------HhHHHHHHHHHHHHHHHcCCeEEEcc-hhe-eccCCcccHHHHHHHHHHHhcc
Confidence 01246799999999999999999994 444 4899999999999999999863
No 31
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.80 E-value=1.6e-16 Score=179.25 Aligned_cols=217 Identities=21% Similarity=0.323 Sum_probs=160.3
Q ss_pred cEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEEEecCceec
Q 002425 367 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICYVQFPQRFD 445 (924)
Q Consensus 367 ~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~va~VQ~PQ~F~ 445 (924)
++.|-.|.+ |-..||||+....|..| +..+|++++|||.+ -..+.+-+.+..| .|| +.|.+||--.--
T Consensus 213 ~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSv-Mtgd~lvrLv~~ME~~P----~aGlIQt~P~~~ 281 (736)
T COG2943 213 NIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSV-MTGDCLVRLVRLMEANP----DAGLIQTSPKAS 281 (736)
T ss_pred ceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccc-cCchHHHHHHHHHhhCC----CCceeecchhhc
Confidence 377777766 67899999999999887 78899999999995 5788888888876 588 799999955444
Q ss_pred CCCc-cccccc-cchhhhhhcccccccCCC--ccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCcccccccccccc
Q 002425 446 GIDR-HDRYSN-RNVVFFDINMKGLDGIQG--PIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKS 521 (924)
Q Consensus 446 n~d~-~d~~~n-~~~~Ff~i~~~gldg~qg--p~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 521 (924)
|.|. ..|.-+ ..+++=-+.--|+..||+ .-|.|.|++.|-+|+.. .||...
T Consensus 282 gg~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~-----------------------hcgLp~-- 336 (736)
T COG2943 282 GGDTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE-----------------------HCGLPP-- 336 (736)
T ss_pred CcchHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH-----------------------hcCCCC--
Confidence 4332 111111 123444566778998987 48999999999998841 112110
Q ss_pred ccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhh
Q 002425 522 KKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVI 601 (924)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~ 601 (924)
++| ++ ..||
T Consensus 337 -------------------------LpG--------------~~--------------pFgG------------------ 345 (736)
T COG2943 337 -------------------------LPG--------------RG--------------PFGG------------------ 345 (736)
T ss_pred -------------------------CCC--------------CC--------------CCCc------------------
Confidence 000 00 1122
Q ss_pred ccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHHhhccc
Q 002425 602 SCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCP 681 (924)
Q Consensus 602 sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~k~~P 681 (924)
..++.|+..+-.|.+.||.+-.. +++...|++.|.|+.+++++-+|||+|++|-+.
T Consensus 346 ------------------~ilSHDfvEAALmRRaGW~v~ia-~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~r----- 401 (736)
T COG2943 346 ------------------HILSHDFVEAALMRRAGWGVWIA-YDLDGSYEELPPNLLDELKRDRRWCHGNLQHFR----- 401 (736)
T ss_pred ------------------cccchHHHHHHHHhhcCceEEEe-ccCCCchhhCCchHHHHHhhhhHhhhcchhhce-----
Confidence 36788999999999999976555 677778999999999999999999999999874
Q ss_pred cccccCCCCCcccceeeeccchhhhhHHHHHHHHH
Q 002425 682 IWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCT 716 (924)
Q Consensus 682 l~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liyll 716 (924)
++ ..+||.|..|++++.+++.|+++...+++++
T Consensus 402 l~--~~~GlHwvsR~h~~tGVmsYlsaPlWfl~ll 434 (736)
T COG2943 402 LF--LVKGLHWVSRAHFLTGVMSYLSAPLWFLFLL 434 (736)
T ss_pred ee--ccCCccHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 33 2689999999999999888887644444433
No 32
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.78 E-value=4.9e-18 Score=175.82 Aligned_cols=59 Identities=27% Similarity=0.223 Sum_probs=52.1
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCC
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGID 448 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d 448 (924)
+..|++|+|.+++ .+.++||+++|+|. .+.|++|++++..|.|| +++.|+..+.+.+.+
T Consensus 62 ~~g~~~a~n~g~~----~a~~d~v~~lD~D~-~~~~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~ 120 (235)
T cd06434 62 HPGKRRALAEGIR----HVTTDIVVLLDSDT-VWPPNALPEMLKPFEDP----KVGGVGTNQRILRPR 120 (235)
T ss_pred CCChHHHHHHHHH----HhCCCEEEEECCCc-eeChhHHHHHHHhccCC----CEeEEcCceEeecCc
Confidence 4569999999998 46899999999999 57899999999988888 799999999888764
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.77 E-value=9.1e-18 Score=176.07 Aligned_cols=128 Identities=22% Similarity=0.308 Sum_probs=98.6
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
.+..|.|.|+|||+| |+ ..+..++.|+++++||.+++.++|+|||+++-|.+.+.
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~--------------------- 79 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAR--------------------- 79 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHH---------------------
Confidence 456889999999998 65 67899999999999998889999999999874322111
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
++.+
T Consensus 80 ------------------------------~~~~---------------------------------------------- 83 (251)
T cd06439 80 ------------------------------EYAD---------------------------------------------- 83 (251)
T ss_pred ------------------------------HHhh----------------------------------------------
Confidence 1100
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcc
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKK 434 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~ 434 (924)
. ++.++..++ ...|++|+|.+++ ..++++|+++|+|.+ +.|++|++.+..+.++ +
T Consensus 84 ---------~--~v~~i~~~~-----~~g~~~a~n~gi~----~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~----~ 138 (251)
T cd06439 84 ---------K--GVKLLRFPE-----RRGKAAALNRALA----LATGEIVVFTDANAL-LDPDALRLLVRHFADP----S 138 (251)
T ss_pred ---------C--cEEEEEcCC-----CCChHHHHHHHHH----HcCCCEEEEEccccC-cCHHHHHHHHHHhcCC----C
Confidence 0 144444443 3469999999999 467899999999995 6799999999998877 6
Q ss_pred eEEEecCceecCCC
Q 002425 435 ICYVQFPQRFDGID 448 (924)
Q Consensus 435 va~VQ~PQ~F~n~d 448 (924)
+++|+......+.+
T Consensus 139 ~~~v~~~~~~~~~~ 152 (251)
T cd06439 139 VGAVSGELVIVDGG 152 (251)
T ss_pred ccEEEeEEEecCCc
Confidence 88999877765443
No 34
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.74 E-value=6.1e-16 Score=175.18 Aligned_cols=133 Identities=22% Similarity=0.198 Sum_probs=93.1
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
++..|+|.|+||++| |. ..+..++-|++++|||. ++.|+|.|||+++-|.+-+.+
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~-------------------- 90 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARA-------------------- 90 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHH--------------------
Confidence 467899999999999 76 67899999999999995 489999999998844332111
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+. + +||.
T Consensus 91 ----------------------------------~~-------~------------------------~~~~-------- 97 (384)
T TIGR03469 91 ----------------------------------AA-------R------------------------AYGR-------- 97 (384)
T ss_pred ----------------------------------HH-------H------------------------hcCC--------
Confidence 00 0 0000
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhcccc-CCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCc
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVIS-NAPYLLNVDCDHYINNSKALREAMCFMMDPTSGK 433 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~t-n~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~ 433 (924)
-+++.++..+.+|. .-..|+.|+|.+++.+.... .+|+++.+|+|. .++|++|++++..+.++
T Consensus 98 ----------~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~-~~~p~~l~~lv~~~~~~---- 161 (384)
T TIGR03469 98 ----------GDRLTVVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLTDADI-AHGPDNLARLVARARAE---- 161 (384)
T ss_pred ----------CCcEEEecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEECCCC-CCChhHHHHHHHHHHhC----
Confidence 01244454333331 34579999999998532111 289999999998 57999999999988876
Q ss_pred ceEEEecC
Q 002425 434 KICYVQFP 441 (924)
Q Consensus 434 ~va~VQ~P 441 (924)
++++|...
T Consensus 162 ~~~~vs~~ 169 (384)
T TIGR03469 162 GLDLVSLM 169 (384)
T ss_pred CCCEEEec
Confidence 45566543
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.70 E-value=7.7e-16 Score=159.67 Aligned_cols=54 Identities=15% Similarity=0.151 Sum_probs=47.8
Q ss_pred ccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHHh
Q 002425 622 VTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLS 677 (924)
Q Consensus 622 ITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~~ 677 (924)
..||.+++++++++|+++.|+ |...+ ....+.+++.+++|+.||+.|..|.+.+
T Consensus 180 ~~eD~~l~~r~~~~G~~~~~~-~~~~~-~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 180 RNEDAELNYRLRKAGYKIWLS-PDIRV-YYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred ccchhHHHHHHHHcCcEEEEc-CCeEE-EEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 469999999999999999999 44443 6778999999999999999999999974
No 36
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.63 E-value=6e-16 Score=156.76 Aligned_cols=138 Identities=29% Similarity=0.412 Sum_probs=104.0
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccccccccchhhhhhcc----cccccCC-Ccccc
Q 002425 403 YLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINM----KGLDGIQ-GPIYV 477 (924)
Q Consensus 403 ~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~Ff~i~~----~gldg~q-gp~y~ 477 (924)
||+++|+|.. +.+++|++++.+|.|| +++.||+|+.++| .++...+-+.++|+... +..+..+ .....
T Consensus 1 ~v~~~DaDt~-~~~d~l~~~~~~~~~~----~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTR-LPPDFLERLVAALEDP----KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCC-CChHHHHHHHHHHhCC----CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 6899999995 7899999999988888 8999999999873 34445555555553221 1111222 23456
Q ss_pred ccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccC
Q 002425 478 GTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSL 557 (924)
Q Consensus 478 GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (924)
|+|.++||+|+
T Consensus 74 G~~~~~r~~~l--------------------------------------------------------------------- 84 (193)
T PF13632_consen 74 GSGMLFRREAL--------------------------------------------------------------------- 84 (193)
T ss_pred CcceeeeHHHH---------------------------------------------------------------------
Confidence 77777766655
Q ss_pred CchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCC
Q 002425 558 MPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGW 637 (924)
Q Consensus 558 ~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~Gw 637 (924)
+++||++. ..+++||+++++++.++||
T Consensus 85 ---------------------~~vg~~~~--------------------------------~~~~~ED~~l~~~l~~~G~ 111 (193)
T PF13632_consen 85 ---------------------REVGGFDD--------------------------------PFSIGEDMDLGFRLRRAGY 111 (193)
T ss_pred ---------------------HHhCcccc--------------------------------cccccchHHHHHHHHHCCC
Confidence 45665430 4689999999999999999
Q ss_pred EEEEecCCCCccccCCCCCHHHHHHHHHHHhhhh
Q 002425 638 RSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGS 671 (924)
Q Consensus 638 rsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~ 671 (924)
++.|++. .. ++.++|.|+.++++||+||+.|.
T Consensus 112 ~~~~~~~-~~-~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 112 RIVYVPD-AI-VYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred EEEEecc-cc-eeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999954 33 48999999999999999999998
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.57 E-value=1.4e-14 Score=147.66 Aligned_cols=115 Identities=17% Similarity=0.101 Sum_probs=81.8
Q ss_pred cEEEEecccCCCCCCCCchhhhHHHHHhhc-------cccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEe
Q 002425 367 RLVYVSREKRPGFDHHKKAGAMNALIRVSA-------VISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQ 439 (924)
Q Consensus 367 ~lvYvsRekrpg~~hh~KAGalN~llrvs~-------~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ 439 (924)
++.++.++... .+..|++|+|.+++.+. .-..+++|+++|+|. .+.|++|+++..+|.|| +++.||
T Consensus 51 ~v~~i~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~-~~~~~~l~~~~~~~~~~----~v~~v~ 123 (191)
T cd06436 51 RVHLLRRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADG-RLDPNALEAVAPYFSDP----RVAGTQ 123 (191)
T ss_pred cEEEEeccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCC-CcCHhHHHHHHHhhcCC----ceEEEe
Confidence 36666664311 24579999999998531 011358999999999 57999999988899898 799999
Q ss_pred cCceecCCCccc--c-ccccchhhhhhcccccccCCCccccccccchhhhhh
Q 002425 440 FPQRFDGIDRHD--R-YSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQAL 488 (924)
Q Consensus 440 ~PQ~F~n~d~~d--~-~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~AL 488 (924)
.+.++.|.+.+- + ...+...++.+++.++.......+.|+|++|||+||
T Consensus 124 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 175 (191)
T cd06436 124 SRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSAL 175 (191)
T ss_pred eeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHH
Confidence 999998866441 1 122333344556666665555567899999999877
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.48 E-value=1.6e-13 Score=138.28 Aligned_cols=102 Identities=20% Similarity=0.123 Sum_probs=64.8
Q ss_pred CCCchhhhHHHHHhhc-cccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCcccc---cccc
Q 002425 381 HHKKAGAMNALIRVSA-VISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDR---YSNR 456 (924)
Q Consensus 381 hh~KAGalN~llrvs~-~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~---~~n~ 456 (924)
+..|++|+|.+++... .-.++++++++|+|.. +.|++|++++..|.+. ...||......+.+.+-. +.-.
T Consensus 61 ~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~-~~p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~~~~~~~~~~~ 134 (183)
T cd06438 61 RRGKGYALDFGFRHLLNLADDPDAVVVFDADNL-VDPNALEELNARFAAG-----ARVVQAYYNSKNPDDSWITRLYAFA 134 (183)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC-CChhHHHHHHHHHhhC-----CCeeEEEEeeeCCccCHHHHHHHHH
Confidence 4579999999988531 1247999999999995 7899999999988643 246888777665443211 1112
Q ss_pred chhhhhhcccccccCCCc-cccccccchhhhhh
Q 002425 457 NVVFFDINMKGLDGIQGP-IYVGTGCVFRRQAL 488 (924)
Q Consensus 457 ~~~Ff~i~~~gldg~qgp-~y~GTg~v~RR~AL 488 (924)
...++.+...++..+.+. .+.|+|.+|||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 135 FLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 222233333344444433 45677777777665
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.42 E-value=6.2e-12 Score=127.13 Aligned_cols=122 Identities=19% Similarity=0.253 Sum_probs=89.2
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||||| |....+.+|+.|+++.+||. +.|+|+|||..+-+.+.+
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~-------------------------- 49 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRV-------------------------- 49 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHH--------------------------
Confidence 57999999998 66678899999999999984 789999999876221111
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
.+.|.+ .
T Consensus 50 ------------------------~~~~~~----------------------------------~--------------- 56 (202)
T cd04184 50 ------------------------LKKYAA----------------------------------Q--------------- 56 (202)
T ss_pred ------------------------HHHHHh----------------------------------c---------------
Confidence 111100 0
Q ss_pred cccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEE
Q 002425 359 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICY 437 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~va~ 437 (924)
.+++.++..+. ...++.|+|.+++ .+.++||+.+|+|. .+.|++|.+++..+ .+| +++.
T Consensus 57 ------~~~~~~~~~~~-----~~g~~~a~n~g~~----~a~~d~i~~ld~D~-~~~~~~l~~~~~~~~~~~----~~~~ 116 (202)
T cd04184 57 ------DPRIKVVFREE-----NGGISAATNSALE----LATGEFVALLDHDD-ELAPHALYEVVKALNEHP----DADL 116 (202)
T ss_pred ------CCCEEEEEccc-----CCCHHHHHHHHHH----hhcCCEEEEECCCC-cCChHHHHHHHHHHHhCC----CCCE
Confidence 01244554443 3568999999999 46889999999999 57999999999977 777 5777
Q ss_pred EecCcee
Q 002425 438 VQFPQRF 444 (924)
Q Consensus 438 VQ~PQ~F 444 (924)
|+.....
T Consensus 117 v~~~~~~ 123 (202)
T cd04184 117 IYSDEDK 123 (202)
T ss_pred EEccHHh
Confidence 7665443
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.36 E-value=2.3e-11 Score=123.09 Aligned_cols=65 Identities=18% Similarity=0.165 Sum_probs=51.7
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEecCceecC
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQFPQRFDG 446 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~-Dp~~g~~va~VQ~PQ~F~n 446 (924)
+.|+.+++ ...+++|+|.+++ .+.|+||+.+|+|.+ ..|++|.+++.+|. +| ++++|.......+
T Consensus 57 i~~i~~~~-----n~G~~~a~N~g~~----~a~gd~i~~lD~Dd~-~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~ 122 (201)
T cd04195 57 LKVVPLEK-----NRGLGKALNEGLK----HCTYDWVARMDTDDI-SLPDRFEKQLDFIEKNP----EIDIVGGGVLEFD 122 (201)
T ss_pred eEEEEcCc-----cccHHHHHHHHHH----hcCCCEEEEeCCccc-cCcHHHHHHHHHHHhCC----CeEEEcccEEEEC
Confidence 55666654 2468999999999 578999999999995 78999999999874 56 6888887765543
No 41
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.26 E-value=1.8e-11 Score=124.98 Aligned_cols=155 Identities=23% Similarity=0.309 Sum_probs=108.4
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCccccccccchhh
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVF 460 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~d~~~n~~~~F 460 (924)
-+.|..||.++++. ...+++|+++|+|++ .+|++|++++..+.|| +++.|..+.++.+.+.. .+.-...|
T Consensus 15 ~N~Kv~nL~~~~~~---~a~~d~~~~~DsDi~-v~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~~~--~~~l~~~~ 84 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA---GAKYDYLVISDSDIR-VPPDYLRELVAPLADP----GVGLVTGLPRGVPARGF--WSRLEAAF 84 (175)
T ss_pred CChHHHHHHHHHHh---hCCCCEEEEECCCee-ECHHHHHHHHHHHhCC----CCcEEEecccccCCcCH--HHHHHHHH
Confidence 57899999999983 279999999999996 5899999999999999 79999887775544421 11111111
Q ss_pred hhhcccccc--cCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCcCCCcchhhhh
Q 002425 461 FDINMKGLD--GIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIY 538 (924)
Q Consensus 461 f~i~~~gld--g~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 538 (924)
+. ..++.- .-..++
T Consensus 85 ~~-~~~~~~~a~~~~~~--------------------------------------------------------------- 100 (175)
T PF13506_consen 85 FN-FLPGVLQALGGAPF--------------------------------------------------------------- 100 (175)
T ss_pred Hh-HHHHHHHHhcCCCc---------------------------------------------------------------
Confidence 11 011100 000111
Q ss_pred hhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcc
Q 002425 539 ALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWI 618 (924)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~ 618 (924)
.+|.+..+++++|+++||+.. .
T Consensus 101 ---------------------------~~G~~m~~rr~~L~~~GG~~~-------------------------------l 122 (175)
T PF13506_consen 101 ---------------------------AWGGSMAFRREALEEIGGFEA-------------------------------L 122 (175)
T ss_pred ---------------------------eecceeeeEHHHHHHcccHHH-------------------------------H
Confidence 235566667777788888643 1
Q ss_pred cccccchHHHHHHHHHCCCEEEEecCCCCccccCCC----CCHHHHHHHHHHHhh
Q 002425 619 YGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAP----INLSDRLHQVLRWAL 669 (924)
Q Consensus 619 ~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP----~tl~~~l~QR~RWA~ 669 (924)
.+.++||+.+|-+++++|||++..+. .. .....| .++.++++++.||++
T Consensus 123 ~~~ladD~~l~~~~~~~G~~v~~~~~-~v-~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 123 ADYLADDYALGRRLRARGYRVVLSPY-PV-VQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred hhhhhHHHHHHHHHHHCCCeEEEcch-he-eecccCccccccHHHHHHHHHhhcC
Confidence 25889999999999999999999853 22 245566 489999999999974
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.25 E-value=1.7e-10 Score=115.05 Aligned_cols=56 Identities=18% Similarity=0.084 Sum_probs=44.4
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHH-hhcCCCCCcceEEEecCceecC
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMC-FMMDPTSGKKICYVQFPQRFDG 446 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~-ff~Dp~~g~~va~VQ~PQ~F~n 446 (924)
..+++|+|.+++ ..+++||+++|+|.. ..++.+.+.+. +..++ ++.+|.....+.+
T Consensus 61 ~g~~~a~n~~~~----~a~~~~v~~ld~D~~-~~~~~~~~~~~~~~~~~----~~~~v~g~~~~~~ 117 (202)
T cd06433 61 KGIYDAMNKGIA----LATGDIIGFLNSDDT-LLPGALLAVVAAFAEHP----EVDVVYGDVLLVD 117 (202)
T ss_pred cCHHHHHHHHHH----HcCCCEEEEeCCCcc-cCchHHHHHHHHHHhCC----CccEEEeeeEEEc
Confidence 468999999999 578999999999995 67899999984 55666 5677777665543
No 43
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.20 E-value=3.1e-10 Score=115.14 Aligned_cols=57 Identities=16% Similarity=0.136 Sum_probs=46.9
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHh-hcCCCCCcceEEEecCceecC
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCF-MMDPTSGKKICYVQFPQRFDG 446 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~f-f~Dp~~g~~va~VQ~PQ~F~n 446 (924)
.+.+++|+|.+++ .++++||+++|+|.+ ..|+.|.+.+.. +.+| +.+++.......+
T Consensus 64 ~~G~~~~~n~g~~----~~~g~~v~~ld~Dd~-~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~ 121 (214)
T cd04196 64 NLGVARNFESLLQ----AADGDYVFFCDQDDI-WLPDKLERLLKAFLKDD----KPLLVYSDLELVD 121 (214)
T ss_pred CccHHHHHHHHHH----hCCCCEEEEECCCcc-cChhHHHHHHHHHhcCC----CceEEecCcEEEC
Confidence 4678999999988 578999999999985 689999999997 5566 6778888766543
No 44
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.19 E-value=7.6e-10 Score=113.47 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=34.6
Q ss_pred eeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCch
Q 002425 201 IDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 246 (924)
Q Consensus 201 VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~ 246 (924)
|.|+||++| |+. .+..++.|+++..|+ .+.|+|+|||+.+
T Consensus 1 vsvii~~~n---~~~-~l~~~l~sl~~q~~~--~~evivvdd~s~d 40 (221)
T cd02522 1 LSIIIPTLN---EAE-NLPRLLASLRRLNPL--PLEIIVVDGGSTD 40 (221)
T ss_pred CEEEEEccC---cHH-HHHHHHHHHHhccCC--CcEEEEEeCCCCc
Confidence 579999998 764 789999999999984 5789999999876
No 45
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.19 E-value=1e-09 Score=119.64 Aligned_cols=110 Identities=19% Similarity=0.134 Sum_probs=83.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchhhhhh
Q 002425 203 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQ 282 (924)
Q Consensus 203 vfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~yF~~ 282 (924)
|+|||+| |++..+.+|+.|+++..||.....|+|.|||+++-|.+.+.+
T Consensus 2 IIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~---------------------------- 50 (299)
T cd02510 2 VIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLE---------------------------- 50 (299)
T ss_pred EEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHH----------------------------
Confidence 8999999 887999999999999999876678999999998743331111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcccccC
Q 002425 283 KLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEG 362 (924)
Q Consensus 283 ~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~d~~~ 362 (924)
.+.+
T Consensus 51 ----------------------~~~~------------------------------------------------------ 54 (299)
T cd02510 51 ----------------------EYYK------------------------------------------------------ 54 (299)
T ss_pred ----------------------HHHh------------------------------------------------------
Confidence 0000
Q ss_pred CccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 363 NLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 363 ~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
+..|++.++..++ ...++.|.|.+++ .+.|+||+.+|+|.. +.+++|.+.+-.+...
T Consensus 55 ~~~~~v~vi~~~~-----n~G~~~a~N~g~~----~A~gd~i~fLD~D~~-~~~~wL~~ll~~l~~~ 111 (299)
T cd02510 55 KYLPKVKVLRLKK-----REGLIRARIAGAR----AATGDVLVFLDSHCE-VNVGWLEPLLARIAEN 111 (299)
T ss_pred hcCCcEEEEEcCC-----CCCHHHHHHHHHH----HccCCEEEEEeCCcc-cCccHHHHHHHHHHhC
Confidence 0013466665554 3568999999999 578999999999995 6899999999877543
No 46
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.15 E-value=1.2e-09 Score=108.56 Aligned_cols=42 Identities=24% Similarity=0.397 Sum_probs=37.1
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
..|++|+|.+++ .++++||+.+|+|. ++.|++|++.+-++ ++
T Consensus 65 ~~~~~~~n~g~~----~a~g~~i~~lD~D~-~~~~~~l~~~~~~~-~~ 106 (182)
T cd06420 65 FRKAKIRNKAIA----AAKGDYLIFIDGDC-IPHPDFIADHIELA-EP 106 (182)
T ss_pred hhHHHHHHHHHH----HhcCCEEEEEcCCc-ccCHHHHHHHHHHh-CC
Confidence 468999999999 57899999999998 57999999999877 44
No 47
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.14 E-value=4.8e-09 Score=123.05 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=45.7
Q ss_pred cccchHHHHHHHHHC--CCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhhhHHHHH
Q 002425 621 SVTEDILTGFKMHCH--GWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEILL 676 (924)
Q Consensus 621 sITED~~tg~rL~~~--GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G~lQil~ 676 (924)
.+.||=.++..|.++ |||..|+.. ..| +..+|++++.+++||+||..|++--++
T Consensus 324 ~lGEDR~LttLlLk~~~~~k~~y~~~-A~a-~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 324 DLGEDRWLTTLLLKQFPGYKTEYVPS-AVA-YTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred hcchhHHHHHHHHhhCCCceEEEccc-ccc-cccCCccHHHHHHHhhhccchhHhhHh
Confidence 578998888777776 899999954 444 899999999999999999999986543
No 48
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.13 E-value=1.1e-09 Score=106.00 Aligned_cols=52 Identities=23% Similarity=0.177 Sum_probs=41.9
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEEEecC
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICYVQFP 441 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~va~VQ~P 441 (924)
...+++|+|.+++ ..++++++.+|+|.+ +.++++.+.+-.+ .+| +++.++..
T Consensus 59 ~~g~~~a~n~~~~----~~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~~~----~~~~~~~~ 111 (166)
T cd04186 59 NLGFGAGNNQGIR----EAKGDYVLLLNPDTV-VEPGALLELLDAAEQDP----DVGIVGPK 111 (166)
T ss_pred CcChHHHhhHHHh----hCCCCEEEEECCCcE-ECccHHHHHHHHHHhCC----CceEEEcc
Confidence 4578999999999 458999999999995 6899999998754 445 67777665
No 49
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.07 E-value=3e-09 Score=110.03 Aligned_cols=42 Identities=14% Similarity=0.159 Sum_probs=35.9
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhH
Q 002425 203 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTF 249 (924)
Q Consensus 203 vfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~ 249 (924)
|+||+|| |+ ..+..|+-|+++++|| +.+.++|.|||+.+-|.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~ 42 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSA 42 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHH
Confidence 6899998 53 7999999999999999 46899999999987443
No 50
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.07 E-value=3.8e-09 Score=111.77 Aligned_cols=60 Identities=12% Similarity=0.045 Sum_probs=46.0
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecC
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFP 441 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~P 441 (924)
+.++.+++ ...|++|+|++++ .+.++||+.+|+|.. .+|++|.+++..+.++ +..+|...
T Consensus 70 v~~~~~~~-----n~G~~~a~n~g~~----~a~g~~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~ 129 (243)
T PLN02726 70 ILLRPRPG-----KLGLGTAYIHGLK----HASGDFVVIMDADLS-HHPKYLPSFIKKQRET----GADIVTGT 129 (243)
T ss_pred EEEEecCC-----CCCHHHHHHHHHH----HcCCCEEEEEcCCCC-CCHHHHHHHHHHHHhc----CCcEEEEc
Confidence 55555443 3458999999998 478999999999994 7999999999888665 35556543
No 51
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.04 E-value=2.9e-09 Score=102.00 Aligned_cols=64 Identities=30% Similarity=0.393 Sum_probs=48.1
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHH-HhhcCCCCCcceEEEecCceec
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAM-CFMMDPTSGKKICYVQFPQRFD 445 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am-~ff~Dp~~g~~va~VQ~PQ~F~ 445 (924)
++++..++ ...|+.|+|.+++. .+++||+.+|+|.. ..+++|++.+ .++.++ +++.|+..+...
T Consensus 55 ~~~~~~~~-----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~-~~~~~l~~~~~~~~~~~----~~~~v~~~~~~~ 119 (180)
T cd06423 55 VLVVRDKE-----NGGKAGALNAGLRH----AKGDIVVVLDADTI-LEPDALKRLVVPFFADP----KVGAVQGRVRVR 119 (180)
T ss_pred EEEEEecc-----cCCchHHHHHHHHh----cCCCEEEEECCCCC-cChHHHHHHHHHhccCC----CeeeEeeeEEEe
Confidence 44555544 45699999999994 69999999999995 6899999994 466667 567776655443
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.01 E-value=8.2e-09 Score=104.96 Aligned_cols=56 Identities=16% Similarity=0.209 Sum_probs=42.5
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCcee
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRF 444 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F 444 (924)
+..+.++|.++...- ...++|++.+|+|. +++|+++++++..+.+| +++.|. |.++
T Consensus 62 ~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~-~~~~~~l~~l~~~~~~~----~~~~~~-~~~~ 117 (202)
T cd04185 62 LGGAGGFYEGVRRAY-ELGYDWIWLMDDDA-IPDPDALEKLLAYADKD----NPQFLA-PLVL 117 (202)
T ss_pred cchhhHHHHHHHHHh-ccCCCEEEEeCCCC-CcChHHHHHHHHHHhcC----CceEec-ceeE
Confidence 457888998887432 45789999999998 57899999999988777 566553 4343
No 53
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.01 E-value=3.3e-09 Score=110.19 Aligned_cols=66 Identities=20% Similarity=0.201 Sum_probs=45.1
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHH---Hh-hcCCCCCcceEEEecCce
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAM---CF-MMDPTSGKKICYVQFPQR 443 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am---~f-f~Dp~~g~~va~VQ~PQ~ 443 (924)
+.++..+++ ..+|+|+|.+++.+. -.+++||+.+|+|.+ .+|++|.+++ .. ..++ +++.+ .|+.
T Consensus 49 i~~i~~~~n-----~G~~~a~N~g~~~a~-~~~~d~v~~lD~D~~-~~~~~l~~l~~~~~~~~~~~----~~~~~-~~~~ 116 (237)
T cd02526 49 IELIHLGEN-----LGIAKALNIGIKAAL-ENGADYVLLFDQDSV-PPPDMVEKLLAYKILSDKNS----NIGAV-GPRI 116 (237)
T ss_pred EEEEECCCc-----eehHHhhhHHHHHHH-hCCCCEEEEECCCCC-cCHhHHHHHHHHHHhhccCC----CeEEE-eeeE
Confidence 566666542 349999999998421 125699999999995 6899999985 32 2344 45544 5554
Q ss_pred ec
Q 002425 444 FD 445 (924)
Q Consensus 444 F~ 445 (924)
.+
T Consensus 117 ~~ 118 (237)
T cd02526 117 ID 118 (237)
T ss_pred Ec
Confidence 43
No 54
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.99 E-value=9.2e-09 Score=105.73 Aligned_cols=61 Identities=10% Similarity=0.055 Sum_probs=47.0
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCc
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQ 442 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ 442 (924)
+.++..++ +..|++|+|.+++ .+.++||+.+|+|. ..+|++|...+..+.++ +.+.|..+.
T Consensus 55 i~~~~~~~-----n~G~~~a~n~g~~----~a~gd~i~~lD~D~-~~~~~~l~~l~~~~~~~----~~~~v~g~~ 115 (224)
T cd06442 55 VRLIVRPG-----KRGLGSAYIEGFK----AARGDVIVVMDADL-SHPPEYIPELLEAQLEG----GADLVIGSR 115 (224)
T ss_pred eEEEecCC-----CCChHHHHHHHHH----HcCCCEEEEEECCC-CCCHHHHHHHHHHHhcC----CCCEEEEee
Confidence 44444544 4568999999999 47789999999998 57899999999987766 345565543
No 55
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.95 E-value=8.2e-10 Score=105.99 Aligned_cols=111 Identities=16% Similarity=0.134 Sum_probs=74.5
Q ss_pred cEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecC
Q 002425 367 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDG 446 (924)
Q Consensus 367 ~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n 446 (924)
++.|+.+++ + ..+++|+|.+++ ...++||+.+|+|.+ ..+++|.+.+.++.++. ..+.+...+....+
T Consensus 54 ~i~~i~~~~----n-~g~~~~~n~~~~----~a~~~~i~~ld~D~~-~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~ 121 (169)
T PF00535_consen 54 NIRYIRNPE----N-LGFSAARNRGIK----HAKGEYILFLDDDDI-ISPDWLEELVEALEKNP--PDVVIGSVIYIDDD 121 (169)
T ss_dssp TEEEEEHCC----C-SHHHHHHHHHHH----H--SSEEEEEETTEE-E-TTHHHHHHHHHHHCT--TEEEEEEEEEEECT
T ss_pred ccccccccc----c-cccccccccccc----ccceeEEEEeCCCce-EcHHHHHHHHHHHHhCC--CcEEEEEEEEecCC
Confidence 488999886 2 389999999999 578999999999996 57789999999998742 13444444444333
Q ss_pred CCcccccc--ccchhhhhhcccccccCCCccccccccchhhhhhc
Q 002425 447 IDRHDRYS--NRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALY 489 (924)
Q Consensus 447 ~d~~d~~~--n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALy 489 (924)
........ .....++............+.++|+++++||+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 166 (169)
T PF00535_consen 122 NRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFE 166 (169)
T ss_dssp TETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHH
T ss_pred ccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHH
Confidence 22222211 11223333344455666788999999999999883
No 56
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.79 E-value=1.3e-07 Score=105.72 Aligned_cols=110 Identities=14% Similarity=0.209 Sum_probs=83.1
Q ss_pred CCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCc
Q 002425 197 DLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAP 276 (924)
Q Consensus 197 ~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraP 276 (924)
..|.|.|+||+|| ++ ..+..++.|++++.|+ .+.|+|.|||+++-|.+-
T Consensus 4 ~~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i------------------------- 52 (328)
T PRK10073 4 STPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEI------------------------- 52 (328)
T ss_pred CCCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHH-------------------------
Confidence 3578999999998 54 6889999999999997 488999999998743221
Q ss_pred hhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCC
Q 002425 277 EWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNG 356 (924)
Q Consensus 277 e~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g 356 (924)
-++|.+
T Consensus 53 --------------------------~~~~~~------------------------------------------------ 58 (328)
T PRK10073 53 --------------------------AKHYAE------------------------------------------------ 58 (328)
T ss_pred --------------------------HHHHHh------------------------------------------------
Confidence 111111
Q ss_pred cccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 357 VRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 357 ~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
+.|++.++..+ +...++|.|.+++ ..+|+||+.+|+|.+ ..|+.+.+.+..+.++
T Consensus 59 -------~~~~i~vi~~~------n~G~~~arN~gl~----~a~g~yi~flD~DD~-~~p~~l~~l~~~~~~~ 113 (328)
T PRK10073 59 -------NYPHVRLLHQA------NAGVSVARNTGLA----VATGKYVAFPDADDV-VYPTMYETLMTMALED 113 (328)
T ss_pred -------hCCCEEEEECC------CCChHHHHHHHHH----hCCCCEEEEECCCCc-cChhHHHHHHHHHHhC
Confidence 01245555432 3568999999999 589999999999996 5799999999877654
No 57
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.73 E-value=1.4e-07 Score=97.17 Aligned_cols=53 Identities=17% Similarity=0.101 Sum_probs=41.9
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCce
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQR 443 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~ 443 (924)
..|++|+|.+++ .+.++||+.+|+|.. .+|+++.+.+..+.++ ....|.....
T Consensus 68 ~G~~~a~~~g~~----~a~gd~i~~ld~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~r~ 120 (211)
T cd04188 68 RGKGGAVRAGML----AARGDYILFADADLA-TPFEELEKLEEALKTS----GYDIAIGSRA 120 (211)
T ss_pred CCcHHHHHHHHH----HhcCCEEEEEeCCCC-CCHHHHHHHHHHHhcc----CCcEEEEEee
Confidence 358999999999 578899999999994 7899999999986655 2445555433
No 58
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.70 E-value=4.3e-07 Score=99.57 Aligned_cols=52 Identities=15% Similarity=0.276 Sum_probs=42.4
Q ss_pred cEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcC
Q 002425 367 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMD 428 (924)
Q Consensus 367 ~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~D 428 (924)
++.|+..++ ...++.|+|.++. .++|+||+.+|+|.+ ..|+.|.+.+-++..
T Consensus 61 ri~~i~~~~-----n~G~~~a~N~gi~----~a~g~~I~~lDaDD~-~~p~~l~~~~~~~~~ 112 (279)
T PRK10018 61 RITYIHNDI-----NSGACAVRNQAIM----LAQGEYITGIDDDDE-WTPNRLSVFLAHKQQ 112 (279)
T ss_pred CEEEEECCC-----CCCHHHHHHHHHH----HcCCCEEEEECCCCC-CCccHHHHHHHHHHh
Confidence 577776654 4568999999999 589999999999996 578999988887643
No 59
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.67 E-value=5.5e-07 Score=97.26 Aligned_cols=69 Identities=19% Similarity=0.245 Sum_probs=49.2
Q ss_pred cEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceec
Q 002425 367 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFD 445 (924)
Q Consensus 367 ~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~ 445 (924)
++.|+.-++ ....|||+|.+++.. .-.+++||+.+|.|.+ +.+++|.+.+..+..+ +.+++.|. |..++
T Consensus 46 ~i~~i~~~~-----N~G~a~a~N~Gi~~a-~~~~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 46 KIALIHLGD-----NQGIAGAQNQGLDAS-FRRGVQGVLLLDQDSR-PGNAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CeEEEECCC-----CcchHHHHHHHHHHH-HHCCCCEEEEECCCCC-CCHHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 466666544 346899999998842 1237899999999995 7899999999887543 12677776 44433
No 60
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.66 E-value=1.2e-07 Score=94.40 Aligned_cols=65 Identities=11% Similarity=0.131 Sum_probs=49.8
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecC
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDG 446 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n 446 (924)
+.++..+++ ..|++|+|.+++ .+.+++|+.+|+|-. ..|++|.+.+..+..+ +..+|+.+....+
T Consensus 56 ~~~~~~~~n-----~G~~~a~n~g~~----~a~gd~i~~lD~D~~-~~~~~l~~l~~~~~~~----~~~~v~g~~~~~~ 120 (185)
T cd04179 56 VRVIRLSRN-----FGKGAAVRAGFK----AARGDIVVTMDADLQ-HPPEDIPKLLEKLLEG----GADVVIGSRFVRG 120 (185)
T ss_pred eEEEEccCC-----CCccHHHHHHHH----HhcCCEEEEEeCCCC-CCHHHHHHHHHHHhcc----CCcEEEEEeecCC
Confidence 445555543 359999999998 578899999999984 6899999999986655 4667777766554
No 61
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.62 E-value=9.1e-07 Score=95.15 Aligned_cols=48 Identities=17% Similarity=0.030 Sum_probs=36.9
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcC-CCCCCccEEEEcCCCCchhhHH
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAV-DYPVDKVACYVSDDGAAMLTFE 250 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~-dYP~~kl~~yvsDDG~~~~t~~ 250 (924)
|.|.|+||||| |. ..+..|+.|++++ ..+...+.+.|.|||+++-|.+
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 56899999998 64 5789999999864 2333468999999999875433
No 62
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.58 E-value=1.1e-06 Score=95.92 Aligned_cols=63 Identities=14% Similarity=0.237 Sum_probs=46.5
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCCCcc
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRH 450 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~d~~ 450 (924)
-.+|.|.|.++. .+++++|+.+|+|. ++.|+++.+++-+...=.. ..-+++-.|..|.+.+..
T Consensus 74 f~~a~arN~g~~----~A~~d~l~flD~D~-i~~~~~i~~~~~~~~~l~~-~~~~~~~~p~~yl~~~~~ 136 (281)
T PF10111_consen 74 FSRAKARNIGAK----YARGDYLIFLDADC-IPSPDFIEKLLNHVKKLDK-NPNAFLVYPCLYLSEEGS 136 (281)
T ss_pred cCHHHHHHHHHH----HcCCCEEEEEcCCe-eeCHHHHHHHHHHHHHHhc-CCCceEEEeeeeccchhh
Confidence 479999999998 57999999999998 5789999999993211100 124566677777765544
No 63
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.51 E-value=1.8e-06 Score=80.72 Aligned_cols=52 Identities=25% Similarity=0.312 Sum_probs=42.1
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHH-hhcCCCCCcceEEEecC
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMC-FMMDPTSGKKICYVQFP 441 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~-ff~Dp~~g~~va~VQ~P 441 (924)
+..|++++|.++.. .++++++++|+|.. ..|+++...+- +..++ +...|+.+
T Consensus 62 ~~g~~~~~~~~~~~----~~~d~v~~~d~D~~-~~~~~~~~~~~~~~~~~----~~~~v~~~ 114 (156)
T cd00761 62 NQGLAAARNAGLKA----ARGEYILFLDADDL-LLPDWLERLVAELLADP----EADAVGGP 114 (156)
T ss_pred CCChHHHHHHHHHH----hcCCEEEEECCCCc-cCccHHHHHHHHHhcCC----CceEEecc
Confidence 56899999999984 58999999999995 68889988744 55566 67778877
No 64
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.44 E-value=1.2e-06 Score=87.85 Aligned_cols=104 Identities=13% Similarity=0.188 Sum_probs=62.8
Q ss_pred EEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEEecCceecCC
Q 002425 368 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGI 447 (924)
Q Consensus 368 lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~VQ~PQ~F~n~ 447 (924)
+.++..++ +..|++|+|++++ .+.++||+.+|+|. ...+++|.+.+.. ++++ .++.+.+... .+.
T Consensus 57 i~~i~~~~-----n~G~~~a~n~g~~----~a~~d~i~~~D~D~-~~~~~~l~~l~~~-~~~~--~~~v~g~~~~--~~~ 121 (181)
T cd04187 57 VKVIRLSR-----NFGQQAALLAGLD----HARGDAVITMDADL-QDPPELIPEMLAK-WEEG--YDVVYGVRKN--RKE 121 (181)
T ss_pred EEEEEecC-----CCCcHHHHHHHHH----hcCCCEEEEEeCCC-CCCHHHHHHHHHH-HhCC--CcEEEEEecC--Ccc
Confidence 55555544 3469999999999 47889999999998 5789999999987 4442 2444433222 221
Q ss_pred CccccccccchhhhhhcccccccCCCccccccccchhhhhhc
Q 002425 448 DRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALY 489 (924)
Q Consensus 448 d~~d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALy 489 (924)
....++.+. .++. ......+..-+...|+.+++||+++-
T Consensus 122 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~ 160 (181)
T cd04187 122 SWLKRLTSK--LFYR-LINKLSGVDIPDNGGDFRLMDRKVVD 160 (181)
T ss_pred hHHHHHHHH--HHHH-HHHHHcCCCCCCCCCCEEEEcHHHHH
Confidence 111111111 1111 11122334445667778899999985
No 65
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.33 E-value=9e-06 Score=91.35 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=35.8
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcC
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMD 428 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~D 428 (924)
..|++|+|++++ .+.|++|+++|+|. ..+++.+.+.+..+.+
T Consensus 148 ~G~~~A~~~Gi~----~a~gd~I~~~DaD~-~~~~~~l~~l~~~l~~ 189 (333)
T PTZ00260 148 KGKGGAVRIGML----ASRGKYILMVDADG-ATDIDDFDKLEDIMLK 189 (333)
T ss_pred CChHHHHHHHHH----HccCCEEEEEeCCC-CCCHHHHHHHHHHHHH
Confidence 479999999999 46899999999998 4789998888876653
No 66
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.26 E-value=9.9e-06 Score=99.05 Aligned_cols=48 Identities=27% Similarity=0.343 Sum_probs=44.0
Q ss_pred cccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhhh
Q 002425 621 SVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALG 670 (924)
Q Consensus 621 sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~G 670 (924)
+..||=.+..++..+||++-|+.. ..| ...+|+++.+++.||+||..|
T Consensus 549 ~~geDR~L~~~llskgy~l~Y~a~-s~a-~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 549 SLGEDRWLCTLLLSKGYRLKYVAA-SDA-ETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ccchhHHHHHHHHhccceeeeecc-ccc-cccCcHhHHHHHHHhhhhccc
Confidence 588999999999999999999954 344 899999999999999999999
No 67
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.21 E-value=7.1e-06 Score=91.19 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=43.2
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEec
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQF 440 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~-Dp~~g~~va~VQ~ 440 (924)
...|++|+|.+++ .+++++|+.+|||....+|+++.+.+..+. || ++++|..
T Consensus 100 n~Gkg~A~~~g~~----~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 100 RPGKGEALWRSLA----ATTGDIVVFVDADLINFDPMFVPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred CCCHHHHHHHHHH----hcCCCEEEEEeCccccCCHHHHHHHHHHHHhCC----CceEEEE
Confidence 3579999999998 478999999999984368999999998775 78 5777765
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.18 E-value=4.9e-05 Score=83.95 Aligned_cols=68 Identities=19% Similarity=0.196 Sum_probs=47.6
Q ss_pred cEEEEecccCCCCCCCCchhhhHHHHHhhccccCCC-EEEEecCCCCCCcHHHHHHHHHhhc-CCCCCcceEEEecCcee
Q 002425 367 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAP-YLLNVDCDHYINNSKALREAMCFMM-DPTSGKKICYVQFPQRF 444 (924)
Q Consensus 367 ~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p-~il~lDaD~yv~~~~~Lr~am~ff~-Dp~~g~~va~VQ~PQ~F 444 (924)
.+.|+.-.+. -.=||+.|.+++.. ..++. |++.|+-|. +.++++|.+.+-.+. +| .++.|+.-...
T Consensus 57 ~v~~i~~~~N-----lG~agg~n~g~~~a--~~~~~~~~l~LN~D~-~~~~~~l~~ll~~~~~~~----~~~~~~~~i~~ 124 (305)
T COG1216 57 NVRLIENGEN-----LGFAGGFNRGIKYA--LAKGDDYVLLLNPDT-VVEPDLLEELLKAAEEDP----AAGVVGPLIRN 124 (305)
T ss_pred cEEEEEcCCC-----ccchhhhhHHHHHH--hcCCCcEEEEEcCCe-eeChhHHHHHHHHHHhCC----CCeEeeeeEec
Confidence 3556655442 33588888877742 34544 999999997 679999999998664 55 68888877665
Q ss_pred cC
Q 002425 445 DG 446 (924)
Q Consensus 445 ~n 446 (924)
++
T Consensus 125 ~~ 126 (305)
T COG1216 125 YD 126 (305)
T ss_pred CC
Confidence 43
No 69
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.56 E-value=0.00053 Score=76.95 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=36.0
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM 427 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~ 427 (924)
..|++|+|++++ .+.||+++.+|||. ..+|+.+.+.+..+.
T Consensus 76 ~G~~~A~~~G~~----~A~gd~vv~~DaD~-q~~p~~i~~l~~~~~ 116 (325)
T PRK10714 76 YGQHSAIMAGFS----HVTGDLIITLDADL-QNPPEEIPRLVAKAD 116 (325)
T ss_pred CCHHHHHHHHHH----hCCCCEEEEECCCC-CCCHHHHHHHHHHHH
Confidence 578999999998 47899999999998 578999999988764
No 70
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.42 E-value=0.0021 Score=72.38 Aligned_cols=159 Identities=26% Similarity=0.405 Sum_probs=107.6
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCCCCCcceEEE-ecCceecCCCccccccccchh
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYV-QFPQRFDGIDRHDRYSNRNVV 459 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp~~g~~va~V-Q~PQ~F~n~d~~d~~~n~~~~ 459 (924)
-+-|-.||=-+.| ....|+|++.|.|-+ -.|+.+.+..-=||.|+ ++|+| |+|-.++-.- +|
T Consensus 155 ~npKInN~mpgy~----~a~ydlvlisDsgI~-m~pdtildm~t~M~she---kmalvtq~py~~dr~G-f~-------- 217 (431)
T KOG2547|consen 155 LNPKINNMMPGYR----AAKYDLVLISDSGIF-MKPDTILDMATTMMSHE---KMALVTQTPYCKDRQG-FD-------- 217 (431)
T ss_pred cChhhhccCHHHH----HhcCCEEEEecCCee-ecCchHHHHHHhhhccc---ceeeecCCceeecccc-ch--------
Confidence 3457777777777 378899999999986 48899999888888886 89998 7786665322 11
Q ss_pred hhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCCCCCccccccccccccccccCCcCCCcchhhhhh
Q 002425 460 FFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYA 539 (924)
Q Consensus 460 Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (924)
.-. .-+|-||. +-|--|-| +|-+. -|.+
T Consensus 218 ---atl-------e~~~fgTs--h~r~yl~~--------------n~~~~---~c~t----------------------- 245 (431)
T KOG2547|consen 218 ---ATL-------EQVYFGTS--HPRIYLSG--------------NVLGF---NCST----------------------- 245 (431)
T ss_pred ---hhh-------hheeeccC--CceEEEcc--------------ccccc---cccc-----------------------
Confidence 110 01333332 12211111 11111 1222
Q ss_pred hhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCccc
Q 002425 540 LENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIY 619 (924)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~ 619 (924)
|.|...++++++|.||+... |
T Consensus 246 ----------------------------gms~~mrK~~ld~~ggi~~f----------------------------~--- 266 (431)
T KOG2547|consen 246 ----------------------------GMSSMMRKEALDECGGISAF----------------------------G--- 266 (431)
T ss_pred ----------------------------cHHHHHHHHHHHHhccHHHH----------------------------H---
Confidence 56778889999999997541 2
Q ss_pred ccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHHHhh
Q 002425 620 GSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWAL 669 (924)
Q Consensus 620 ~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~RWA~ 669 (924)
+.+.||+..+-.+..+||++.+..-... ...+-.++..+..|-.||..
T Consensus 267 ~yLaedyFaaksllSRG~ksaist~pal--QnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 267 GYLAEDYFAAKSLLSRGWKSAISTHPAL--QNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhcccchh--hhhhhhHHHHHHHHHHHhhh
Confidence 4889999999999999999999864222 56677888899999999963
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.26 E-value=0.0019 Score=68.09 Aligned_cols=43 Identities=12% Similarity=0.227 Sum_probs=36.6
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
...+.+.|.++. ...+++|+.+|+|.. ..++.+.+...++.++
T Consensus 57 ~g~~~~~n~~~~----~a~~d~vl~lDaD~~-~~~~~~~~l~~~~~~~ 99 (229)
T cd02511 57 DGFGAQRNFALE----LATNDWVLSLDADER-LTPELADEILALLATD 99 (229)
T ss_pred CChHHHHHHHHH----hCCCCEEEEEeCCcC-cCHHHHHHHHHHHhCC
Confidence 457899999998 478899999999995 6899999999887654
No 72
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.25 E-value=0.0018 Score=61.40 Aligned_cols=46 Identities=22% Similarity=0.287 Sum_probs=40.1
Q ss_pred CCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhH
Q 002425 198 LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTF 249 (924)
Q Consensus 198 lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~ 249 (924)
.|.+.|+|||+| |+ .....+|.|++.+.|+. ..|.|+|||.++-|-
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~ 47 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTT 47 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChH
Confidence 478999999999 65 89999999999999997 559999999998443
No 73
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=95.87 E-value=0.083 Score=59.97 Aligned_cols=41 Identities=22% Similarity=0.265 Sum_probs=34.8
Q ss_pred eEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCch
Q 002425 202 DIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 246 (924)
Q Consensus 202 DvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~ 246 (924)
-|+|.||| - |.-+.+|+-|+++..+-.+...+||++||++.
T Consensus 3 PVlv~ayN---R-p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~ 43 (334)
T cd02514 3 PVLVIACN---R-PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYE 43 (334)
T ss_pred CEEEEecC---C-HHHHHHHHHHHHhccccCCCceEEEEeCCCch
Confidence 47889997 4 68999999999998755567889999999875
No 74
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=92.98 E-value=0.49 Score=49.59 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=37.0
Q ss_pred cEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 367 RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 367 ~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
++.-..|.+.-|. .-|--+++. ...|+|+++.|||- .-.|+++-+.+....+-
T Consensus 64 ~i~l~pR~~klGL-----gtAy~hgl~----~a~g~fiviMDaDl-sHhPk~ipe~i~lq~~~ 116 (238)
T KOG2978|consen 64 NILLKPRTKKLGL-----GTAYIHGLK----HATGDFIVIMDADL-SHHPKFIPEFIRLQKEG 116 (238)
T ss_pred cEEEEeccCcccc-----hHHHHhhhh----hccCCeEEEEeCcc-CCCchhHHHHHHHhhcc
Confidence 4777777764332 123334455 57899999999997 68999999887765554
No 75
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=91.99 E-value=1 Score=56.29 Aligned_cols=101 Identities=25% Similarity=0.280 Sum_probs=65.6
Q ss_pred hhhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEec
Q 002425 564 EKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCI 643 (924)
Q Consensus 564 ~~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~ 643 (924)
+-+||.-.+|-+--....||++. |.. .=.++||+..|+....||-++.|+.
T Consensus 381 rlHYGHPD~~n~~f~~TRGGvSK----------Ask-------------------~lhLsEDIfaG~n~~lRGG~i~h~e 431 (817)
T PF02364_consen 381 RLHYGHPDVFNRIFMTTRGGVSK----------ASK-------------------GLHLSEDIFAGMNATLRGGRIKHCE 431 (817)
T ss_pred hccCCCchhhhhhheeccCccch----------Hhh-------------------cccccHHHHHHHHHHhcCCceeehh
Confidence 34677777776665567788765 111 1278999999999999999999994
Q ss_pred CCCCccccCCCC-CHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceeee
Q 002425 644 PKRPAFKGSAPI-NLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSYI 699 (924)
Q Consensus 644 p~~~af~G~aP~-tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl 699 (924)
=.. .|..-+ .+..-..=-..-+.|+-+..+++.--. .+.+|.+.+-+++.
T Consensus 432 -y~q--cGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yr---Lg~~ld~~R~LSfy 482 (817)
T PF02364_consen 432 -YIQ--CGKGRDVGFNSILNFETKIASGMGEQMLSREYYR---LGTRLDFFRFLSFY 482 (817)
T ss_pred -hhh--cccccccCchhhhhhHhHhcCCccchhhhHHHHH---hhccCCHHHHHHHH
Confidence 333 254432 333444445677889888887763212 25567776555433
No 76
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=83.12 E-value=16 Score=40.92 Aligned_cols=42 Identities=21% Similarity=0.181 Sum_probs=31.3
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCC--CCcHHHHHHHHHhhc
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHY--INNSKALREAMCFMM 427 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~y--v~~~~~Lr~am~ff~ 427 (924)
..|.||..-.+- .+.|.+++..|||-- +++-..|..+|.=..
T Consensus 143 rgKGgAvR~g~l----~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 143 RGKGGAVRKGML----SSRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred CCCCcceehhhH----hccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 458888775543 478999999999973 477788888886333
No 77
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=73.11 E-value=11 Score=40.21 Aligned_cols=50 Identities=26% Similarity=0.374 Sum_probs=38.6
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEEE
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICYV 438 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~va~V 438 (924)
+..-|-+.|++++ .+.++|++.+.-|.++.+++++.+++-.| .|| ++|.|
T Consensus 39 ~~s~~~~yN~a~~----~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 39 AKSMAAAYNEAME----KAKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp -S-TTTHHHHHGG----G--SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred CcCHHHHHHHHHH----hCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 3557889999999 68999999999999999999999999988 899 55544
No 78
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=63.34 E-value=27 Score=40.63 Aligned_cols=48 Identities=17% Similarity=0.075 Sum_probs=37.5
Q ss_pred CCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCC
Q 002425 194 KPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGA 244 (924)
Q Consensus 194 ~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~ 244 (924)
.|++||++.|+|.-.| |--...++||-|++.-.=|.=--.|.+.||=+
T Consensus 150 Ype~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfS 197 (603)
T KOG3737|consen 150 YPENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFS 197 (603)
T ss_pred CcccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCC
Confidence 4689999999999998 99999999999998765443233466677744
No 79
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=56.92 E-value=22 Score=41.08 Aligned_cols=41 Identities=27% Similarity=0.263 Sum_probs=28.7
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHH
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMC 424 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ 424 (924)
...|+-.|=-++-+.. ..+.+||-.+|||.|+| .++.|-+-
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyiP--GaV~EYvk 182 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYIP--GAVNEYVK 182 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCCC--chHHHHHH
Confidence 4678877775433222 46889999999999985 56666543
No 80
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=56.10 E-value=33 Score=31.07 Aligned_cols=28 Identities=29% Similarity=0.459 Sum_probs=19.9
Q ss_pred CchhhhHHHHHhhccccCCCEEEEecCCCCC
Q 002425 383 KKAGAMNALIRVSAVISNAPYLLNVDCDHYI 413 (924)
Q Consensus 383 ~KAGalN~llrvs~~~tn~p~il~lDaD~yv 413 (924)
.+...+|++.+. ..++++++.+|||-++
T Consensus 57 ~~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 57 RQRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred HHHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 334466666652 3588999999999874
No 81
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=50.96 E-value=65 Score=37.23 Aligned_cols=41 Identities=24% Similarity=0.240 Sum_probs=28.6
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHH
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMC 424 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ 424 (924)
...|+-.|=-++-+.. ..+.+||-.+|||.|+| .++.|-+-
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyiP--GaV~EYvk 181 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYFP--GAVNEYVK 181 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCCC--chHHHHHH
Confidence 4678887775443222 46899999999999985 46666443
No 82
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=38.33 E-value=39 Score=41.49 Aligned_cols=50 Identities=16% Similarity=0.060 Sum_probs=42.8
Q ss_pred CCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCch
Q 002425 194 KPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 246 (924)
Q Consensus 194 ~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~ 246 (924)
..+.||++-|+|+-+| |...+...||-|+...-=|.---.+.|.||+...
T Consensus 137 ~~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~ 186 (578)
T KOG3736|consen 137 YSDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDR 186 (578)
T ss_pred cccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcch
Confidence 3466999999999999 9999999999999888766656678999998865
No 83
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=36.71 E-value=2.6e+02 Score=30.48 Aligned_cols=60 Identities=20% Similarity=0.421 Sum_probs=45.8
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCC
Q 002425 203 IFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKI 271 (924)
Q Consensus 203 vfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~i 271 (924)
|+|+|-. ..|.|+-.|+.++.+-.++.+.+.+.=-.||.......-| .-++++ ||++|+.
T Consensus 4 iLlatlG---~sPqVVTETL~aL~~~g~~p~EV~vitT~~~~~~~~~~ll--~g~~~~----l~~~y~~ 63 (224)
T PF09623_consen 4 ILLATLG---TSPQVVTETLYALAQQGEIPDEVHVITTRDGAVRAALRLL--DGGLQR----LCQDYYL 63 (224)
T ss_pred EEEEecC---CCchHHHHHHHHHHcCCCCCCEEEEEECCChHHHHHHHHH--HHHHHH----HHHhhcC
Confidence 7889988 7778999999999999999898888888888877544444 111333 8888865
No 84
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=36.60 E-value=38 Score=39.17 Aligned_cols=40 Identities=28% Similarity=0.323 Sum_probs=25.0
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHH
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAM 423 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am 423 (924)
.+.|+-.|=-++-+.. ....+||-.+|||.|+ |.++.|-.
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYv 180 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYV 180 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHH
Confidence 3578888875444333 4788999999999996 66776643
No 85
>COG4707 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.50 E-value=13 Score=35.12 Aligned_cols=43 Identities=37% Similarity=0.645 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccCCC-------CCCCCCCcCCCccceeeeecCCC
Q 002425 303 KREYEEFKVRINGLVAMAQKVPEDGWTMQDG-------TPWPGNNVRDHPGMIQVFLGQNG 356 (924)
Q Consensus 303 kr~yee~k~ri~~l~~~~~~~p~~~w~m~dg-------~~w~~~~~rdhp~~iqv~~~~~g 356 (924)
|-+|+|+|+. ..++|.|+|= +.|.-.+--.||.+.+.|--.+|
T Consensus 20 k~eyqel~~~-----------~~d~W~m~Dlk~k~~~~sd~tiknlL~hPrl~k~L~ieng 69 (107)
T COG4707 20 KVEYQELKEK-----------DFDGWVMMDLKEKKSNRSDWTIKNLLLHPRLKKMLSIENG 69 (107)
T ss_pred HHHHHHHHHh-----------hhcchhhhHHHHHhcccchhHHHHHhcCchhhhheeeecC
Confidence 5689998753 2358999875 35655556689998888766666
No 86
>PF07851 TMPIT: TMPIT-like protein; InterPro: IPR012926 A number of members of this family are annotated as being transmembrane proteins induced by tumour necrosis factor alpha, but no literature was found to support this. ; GO: 0016021 integral to membrane
Probab=35.75 E-value=7.5e+02 Score=28.66 Aligned_cols=18 Identities=22% Similarity=0.601 Sum_probs=13.3
Q ss_pred hccCccccccccchhhHH
Q 002425 756 QWGGVGIHDWWRNEQFWV 773 (924)
Q Consensus 756 rwsG~s~~~wWr~e~~W~ 773 (924)
+-.|.+++.||....|+-
T Consensus 173 ~~NGS~Ik~WW~~HHy~s 190 (330)
T PF07851_consen 173 IVNGSRIKGWWVFHHYIS 190 (330)
T ss_pred ccCCCcchHHHHHHHHHH
Confidence 345778899998887763
No 87
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=35.52 E-value=1.8e+02 Score=30.99 Aligned_cols=64 Identities=13% Similarity=0.237 Sum_probs=42.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCCCcch--hhHHHHHHHHHHHHHHHHHHHHhhc-CCCCcchh
Q 002425 823 LIPPLTLLVFNLIGVIIGVADAISNGYETWG--PLFGKLFFSLWVILHLYPFLKGFLG-KQDRLPTI 886 (924)
Q Consensus 823 ~iP~~~Llllnlvaiv~gi~~~i~~g~~~~~--~~~g~l~~~~Wvv~nl~p~l~aL~g-R~~r~P~~ 886 (924)
++-=..|+++.+++++-|+..+++......| .+....+..++++|..|-|.--.-| +..|.++.
T Consensus 96 m~lDssLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~ 162 (226)
T COG4858 96 MWLDSSLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTW 162 (226)
T ss_pred EEecccHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchH
Confidence 3334568888899999999888865543333 2334456677888888877766665 33466664
No 88
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=34.53 E-value=8.8e+02 Score=33.32 Aligned_cols=84 Identities=23% Similarity=0.256 Sum_probs=47.4
Q ss_pred cccchHHHHHHHHHCCCEEEEecCCCCccccCCCC-CHHHHHHHHHHHhhhhHHHHHhhccccccccCCCCCcccceee-
Q 002425 621 SVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPI-NLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKPLERFSY- 698 (924)
Q Consensus 621 sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~-tl~~~l~QR~RWA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Y- 698 (924)
.++||+..||....||-++.+|. -.. .|..-+ .+..-..=-..-+.|+-+..+++. + |..+.++.+..-+++
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~E-YiQ--vGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd--~-YrLG~~ldffRmLSfy 1246 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHE-YIQ--VGKGRDVGLNQISNFEAKIANGNGEQTLSRD--Y-YRLGTQLDFFRMLSFY 1246 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccce-eee--cccccccCcchhhhhhhhhcCCCcchhhhHH--H-HHhcccccHHHHHHHH
Confidence 78999999999999999999883 122 132211 111112222456788888777763 1 112455666655543
Q ss_pred eccchhhhhHHH
Q 002425 699 INSVVYPITSIP 710 (924)
Q Consensus 699 l~~~ly~l~sl~ 710 (924)
+.+.-+++.++.
T Consensus 1247 ftt~GF~~n~m~ 1258 (1679)
T KOG0916|consen 1247 FTTVGFYFNNMF 1258 (1679)
T ss_pred hccccHHHHhHH
Confidence 333334454433
No 89
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=33.84 E-value=7.3e+02 Score=27.94 Aligned_cols=43 Identities=12% Similarity=0.308 Sum_probs=31.2
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEE-EEcCC
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVAC-YVSDD 242 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~-yvsDD 242 (924)
.+-++|=|+.|-.| +++ ....=.-.+..++||++++++ .++.|
T Consensus 22 ~~~e~VLILtplrn--a~~--~l~~y~~~L~~L~YP~~lIsLgfLv~d 65 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AAS--FLPDYFDNLLSLTYPHELISLGFLVSD 65 (269)
T ss_pred ccCCeEEEEEecCC--chH--HHHHHHHHHHhCCCCchheEEEEEcCC
Confidence 45677888888877 354 466667778889999998887 44444
No 90
>KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only]
Probab=32.87 E-value=2.5e+02 Score=33.90 Aligned_cols=78 Identities=21% Similarity=0.448 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHH--HHHHHhhh
Q 002425 825 PPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFLGKQDRLPTILLVWAILL--ASIFSLLW 902 (924)
Q Consensus 825 P~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~gR~~r~P~~v~~~s~~l--~~~f~~l~ 902 (924)
|...+++++++++.+++.+++.... +|. -.++=+..+=.+.+ .++-+ |.|++=.+ ++|| +.+|=.+|
T Consensus 311 ~~~~~l~l~~~Cia~aV~W~v~R~e-~~A-wilqDvLGIalci~---vLk~v-----RLPnlK~~-tiLL~c~f~YDiF~ 379 (541)
T KOG2442|consen 311 MSYRLLFLSILCIAVAVVWAVFRNE-DWA-WILQDVLGIALCIT---VLKTV-----RLPNLKVC-TILLLCLFLYDIFF 379 (541)
T ss_pred hhHHHHHHHHhhhheeEEEEEeecC-chH-HHHHhhHhHHHHHH---HHHHh-----cCCchhHH-HHHHHHHHHHhhhe
Confidence 4566788888998888777664432 232 22222222222222 23332 78875322 3444 44455699
Q ss_pred eeecCCCCCCC
Q 002425 903 ARVNPFVSKGD 913 (924)
Q Consensus 903 v~~~~~~~~~~ 913 (924)
|-|-||..++|
T Consensus 380 VFitp~~t~~g 390 (541)
T KOG2442|consen 380 VFITPFITKNG 390 (541)
T ss_pred eeeehhhccCC
Confidence 99999999954
No 91
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=32.74 E-value=1.6e+02 Score=37.12 Aligned_cols=41 Identities=29% Similarity=0.267 Sum_probs=29.1
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHH
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMC 424 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ 424 (924)
...|+-.|=-++-+.. ..+.+||-.+|||.|+| .++.|-+-
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~p--g~v~ey~~ 186 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYIP--GAVWEYAK 186 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCCC--chHHHHHH
Confidence 4678888775443322 57899999999999985 46666443
No 92
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=30.69 E-value=54 Score=37.21 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=36.6
Q ss_pred cccchhhhHhhhhhhcCCCCCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCC--CccEEEEcCCCCch
Q 002425 176 IVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPV--DKVACYVSDDGAAM 246 (924)
Q Consensus 176 v~r~~~~~rL~~r~~~~~~~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~--~kl~~yvsDDG~~~ 246 (924)
++|-..++.|..++. ..-+|.|||+-.| ...+...+..++.-..|. +++++.+.=+....
T Consensus 10 ~drL~~l~~l~~~W~------GPiSvAvf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~H~v~~~~~~ 71 (317)
T PF13896_consen 10 VDRLDHLEELCERWD------GPISVAVFVPGPD-----AKQALDAISYLLRCCCPRVRKNVTFHLVFPNSHF 71 (317)
T ss_pred HHHHHHHHHHHHhCC------CCEEEEEEecchh-----HHHHHHHHHHHHHhcCHHhHhhEEEEEEeecccC
Confidence 344445566666663 3457999999876 344556666665556664 46777665554443
No 93
>PF15050 SCIMP: SCIMP protein
Probab=25.49 E-value=75 Score=31.42 Aligned_cols=41 Identities=20% Similarity=0.590 Sum_probs=27.2
Q ss_pred ccccchhhHHHhhHHHHHHHHHHH-----HHHHHcCCCCCeEeCcCC
Q 002425 764 DWWRNEQFWVIGGASSHLFALIQG-----LLKVVGGVNTNFTVTSKA 805 (924)
Q Consensus 764 ~wWr~e~~W~I~~vs~~lfav~~a-----Llk~L~g~~~~F~VTpKg 805 (924)
+||| ..||+|.++...+..+..| +.+++.++..+++++.-.
T Consensus 2 ~WWr-~nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp~ 47 (133)
T PF15050_consen 2 SWWR-DNFWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKPL 47 (133)
T ss_pred chHH-hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccch
Confidence 5898 5799887765444433222 346667788899988643
No 94
>COG4818 Predicted membrane protein [Function unknown]
Probab=24.73 E-value=6.4e+02 Score=24.31 Aligned_cols=26 Identities=35% Similarity=0.459 Sum_probs=17.8
Q ss_pred HhhHHHHHHHHHHHHHHHHcCCCCCe
Q 002425 774 IGGASSHLFALIQGLLKVVGGVNTNF 799 (924)
Q Consensus 774 I~~vs~~lfav~~aLlk~L~g~~~~F 799 (924)
+.+..+++++.+.+++-.|.-++.+|
T Consensus 5 iegaLCY~lgwitGllFlllEre~~F 30 (105)
T COG4818 5 IEGALCYLLGWITGLLFLLLERESKF 30 (105)
T ss_pred hhhHHHHHHHHHHHHHHHHhhccCcc
Confidence 34455677777888887776666666
No 95
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=24.17 E-value=35 Score=30.86 Aligned_cols=49 Identities=20% Similarity=0.226 Sum_probs=30.3
Q ss_pred hhcCCcHHHHHhhhHhhCCCCCCCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEec
Q 002425 565 KKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCI 643 (924)
Q Consensus 565 ~~fG~s~~f~~S~l~e~Gg~~~~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~ 643 (924)
.-+|....+.++.+.++||+++. - .|| | -||.++..|+...|.+.....
T Consensus 18 ~~~Gg~~~~~~~~f~~vnGfde~----------------------f----~gW--G--~ED~Dl~~Rl~~~g~~~~~~~ 66 (78)
T PF02709_consen 18 NFFGGVFAISREDFEKVNGFDER----------------------F----WGW--G--GEDDDLYNRLWKAGLKIVRVP 66 (78)
T ss_dssp T---SEEEEEHHHHHHTTSS-SS---------------------------TSC--S--SHHHHHHHHHHHTT---B-SS
T ss_pred CeeEEEEEEeHHHHHHcCCCCcc----------------------c----ccc--C--ccHHHHHHHHHHcCCeEEecC
Confidence 34566667777888899999762 1 133 3 299999999999999877653
No 96
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=23.30 E-value=1.6e+02 Score=34.35 Aligned_cols=28 Identities=11% Similarity=0.129 Sum_probs=21.3
Q ss_pred CCCEEEEecCCCCCCcHHHHHHHHHhhc
Q 002425 400 NAPYLLNVDCDHYINNSKALREAMCFMM 427 (924)
Q Consensus 400 n~p~il~lDaD~yv~~~~~Lr~am~ff~ 427 (924)
+.++|++.|||+=.-+++.+++.+..+.
T Consensus 95 ~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 95 DSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred CCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 3489999999974447888888876553
No 97
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=20.72 E-value=3.4e+02 Score=27.14 Aligned_cols=19 Identities=26% Similarity=0.415 Sum_probs=15.9
Q ss_pred chhHHHhHHHHHHhhhhhh
Q 002425 55 TVAWKERMEEWKKKQNEKL 73 (924)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~ 73 (924)
|...+.|++.=|.+|+++.
T Consensus 21 s~E~~a~le~Lr~~~ee~e 39 (142)
T PF11712_consen 21 SPELKARLERLRAEQEERE 39 (142)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 7889999999998887554
No 98
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.65 E-value=1.3e+02 Score=35.63 Aligned_cols=50 Identities=18% Similarity=0.084 Sum_probs=42.6
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhh
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLT 248 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t 248 (924)
.+||+-.|+|+-.| |--.....||.|+|.-.=+.=-..+.+.||++.+.+
T Consensus 121 ~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe 170 (559)
T KOG3738|consen 121 VDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE 170 (559)
T ss_pred cCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH
Confidence 57999999999998 999999999999999865544557999999998743
Done!