Query 002425
Match_columns 924
No_of_seqs 369 out of 1859
Neff 5.4
Searched_HMMs 29240
Date Tue Mar 26 01:48:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 5.6E-51 1.9E-55 496.1 48.5 490 121-877 65-571 (802)
2 2z86_A Chondroitin synthase; G 99.5 3.8E-14 1.3E-18 166.8 17.0 129 195-448 89-218 (625)
3 1xhb_A Polypeptide N-acetylgal 99.5 8.2E-13 2.8E-17 150.5 17.9 116 195-429 25-143 (472)
4 3bcv_A Putative glycosyltransf 99.4 9.6E-13 3.3E-17 134.6 12.8 110 197-429 3-112 (240)
5 1qg8_A Protein (spore coat pol 99.4 2.3E-13 7.9E-18 140.7 8.1 124 199-445 1-129 (255)
6 2d7i_A Polypeptide N-acetylgal 99.4 2.3E-12 7.8E-17 151.4 16.9 115 196-429 109-224 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.4 2.9E-12 1E-16 147.5 15.2 113 195-429 62-174 (501)
8 2z86_A Chondroitin synthase; G 99.3 1.1E-11 3.8E-16 145.9 14.6 126 196-448 372-498 (625)
9 4fix_A UDP-galactofuranosyl tr 99.0 2.8E-09 9.5E-14 127.6 13.8 48 195-246 176-224 (657)
10 3l7i_A Teichoic acid biosynthe 98.9 1.3E-10 4.4E-15 140.0 0.0 110 199-429 2-111 (729)
11 3ckj_A Putative uncharacterize 98.9 4.2E-09 1.4E-13 115.0 11.9 55 381-443 116-171 (329)
12 2fy7_A Beta-1,4-galactosyltran 98.6 5.4E-08 1.9E-12 105.4 8.2 53 623-675 201-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 98.2 2.6E-06 8.7E-11 96.0 10.0 52 381-440 164-216 (387)
14 2nxv_A ATP synthase subunits r 97.9 9.7E-05 3.3E-09 77.3 14.0 45 385-438 63-112 (249)
15 1fo8_A Alpha-1,3-mannosyl-glyc 96.2 0.0084 2.9E-07 66.5 8.0 44 198-246 1-44 (343)
16 2bo4_A Mannosylglycerate synth 95.6 0.057 1.9E-06 61.0 11.9 46 381-427 73-119 (397)
17 2zu9_A Mannosyl-3-phosphoglyce 95.2 0.086 3E-06 59.5 11.2 39 382-423 143-181 (394)
18 2wvl_A Mannosyl-3-phosphoglyce 92.8 0.33 1.1E-05 54.1 9.7 42 198-248 52-93 (391)
19 3q80_A 2-C-methyl-D-erythritol 23.1 90 0.0031 32.0 5.4 28 401-428 100-127 (231)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=5.6e-51 Score=496.12 Aligned_cols=490 Identities=23% Similarity=0.349 Sum_probs=376.1
Q ss_pred hHH-HHHHHHHHHHHHHHHHhccCCCc-----hhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHhhhhhhcCCC
Q 002425 121 YRL-IILLRLVILGLFFHYRILHPVND-----AYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGK 194 (924)
Q Consensus 121 ~R~-~~~~~l~~~~~yl~wRi~~~~~~-----~~~~wl~~~~~E~~~~~~wil~~~~~w~pv~r~~~~~rL~~r~~~~~~ 194 (924)
.|+ ++++.+++.++|++||++.+++. ++++|++++++|+++.+.|++..+..++|..|...++ .+
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~ 135 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQ 135 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CC
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC---------CC
Confidence 454 55677777899999999987763 2467888999999999999999999999998876532 23
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
++++|.|+|+||||| |++.++.+|+.|++++|||.+++.|+|+|||+++-|.+.
T Consensus 136 ~~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~----------------------- 189 (802)
T 4hg6_A 136 PEELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS----------------------- 189 (802)
T ss_dssp TTTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-----------------------
T ss_pred ccCCCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-----------------------
Confidence 567999999999999 999999999999999999999999999999999865431
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
.+|+.+++.. +.+++ ++.++++
T Consensus 190 ----------------~d~~i~~~~~---~~~~~----l~~~~~~----------------------------------- 211 (802)
T 4hg6_A 190 ----------------PDPELAQKAQ---ERRRE----LQQLCRE----------------------------------- 211 (802)
T ss_dssp ----------------SSHHHHHHHH---HHHHH----HHHHHHH-----------------------------------
T ss_pred ----------------CCHHHHHHHH---hhhHH----HHHHHHh-----------------------------------
Confidence 1122222221 11222 2222211
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCc
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGK 433 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~ 433 (924)
.++.|+.|++ +++.||||+|.+++ .+++|||+++|||++ +.|++|++++.+| .||
T Consensus 212 -----------~~v~~i~~~~----~~~GKa~alN~gl~----~a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp---- 267 (802)
T 4hg6_A 212 -----------LGVVYSTRER----NEHAKAGNMSAALE----RLKGELVVVFDADHV-PSRDFLARTVGYFVEDP---- 267 (802)
T ss_dssp -----------HTCEEEECSS----CCSHHHHHHHHHHH----HCCCSEEEECCTTEE-ECTTHHHHHHHHHHHSS----
T ss_pred -----------cCcEEEEecC----CCCcchHHHHHHHH----hcCCCEEEEECCCCC-cChHHHHHHHHHHhcCC----
Confidence 0278899887 57899999999999 479999999999995 6899999999988 588
Q ss_pred ceEEEecCceecCCCcc-------ccccccchhhhhhcccccccCCCccccccccchhhhhhcCCCCCCCCCCCCCcCCC
Q 002425 434 KICYVQFPQRFDGIDRH-------DRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNC 506 (924)
Q Consensus 434 ~va~VQ~PQ~F~n~d~~-------d~~~n~~~~Ff~i~~~gldg~qgp~y~GTg~v~RR~ALyG~~p~~~~~~~~~~~~~ 506 (924)
++++||+|+.+.|.++. .++.+++..||.....+.+.+++++++|+++++||+++
T Consensus 268 ~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al------------------ 329 (802)
T 4hg6_A 268 DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL------------------ 329 (802)
T ss_dssp SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH------------------
T ss_pred CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH------------------
Confidence 79999999999998742 45667788999999999999999999999999999877
Q ss_pred CCCccccccccccccccccCCcCCCcchhhhhhhhhhhhcccccccccccCCchhhHhhhcCCcHHHHHhhhHhhCCCCC
Q 002425 507 LPKWCCCCCRSRKKSKKGKSNKKNKDTSKQIYALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPT 586 (924)
Q Consensus 507 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~S~l~e~Gg~~~ 586 (924)
+++||+++
T Consensus 330 ------------------------------------------------------------------------~~vGgf~~ 337 (802)
T 4hg6_A 330 ------------------------------------------------------------------------DEAGGFAG 337 (802)
T ss_dssp ------------------------------------------------------------------------HHHTTCCC
T ss_pred ------------------------------------------------------------------------HHcCCcCC
Confidence 35676554
Q ss_pred CCchhhHHHHHHHhhccccccccccccccCcccccccchHHHHHHHHHCCCEEEEecCCCCccccCCCCCHHHHHHHHHH
Q 002425 587 GASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLR 666 (924)
Q Consensus 587 ~~~~~~~~~ea~~v~sc~Ye~~T~wGkevGw~~~sITED~~tg~rL~~~GwrsvY~~p~~~af~G~aP~tl~~~l~QR~R 666 (924)
++++||.+++++++++||++.|++ +.. +++.+|+|+.++++||.|
T Consensus 338 ---------------------------------~~~~ED~~l~~rl~~~G~ri~~~~-~~~-~~~~~p~t~~~~~~Qr~R 382 (802)
T 4hg6_A 338 ---------------------------------ETITEDAETALEIHSRGWKSLYID-RAM-IAGLQPETFASFIQQRGR 382 (802)
T ss_dssp ---------------------------------SSSSHHHHHHHHHHTTTCCEEECC-CCC-EEECCCCSHHHHHHHHHH
T ss_pred ---------------------------------CCcchHHHHHHHHHHcCCeEEEec-CCE-EEecCCCCHHHHHHHHHH
Confidence 578899999999999999999995 444 489999999999999999
Q ss_pred HhhhhHHHHHhhccccccccCCCCCcccceeeeccchhhhhHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHH
Q 002425 667 WALGSVEILLSRHCPIWYGYGCGLKPLERFSYINSVVYPITSIPLIAYCTLPAICLLTGKFIVPEISNYASILFMALFIS 746 (924)
Q Consensus 667 WA~G~lQil~~k~~Pl~~g~~~~L~~~QRL~Yl~~~ly~l~sl~~liylllP~l~Ll~G~~ivp~~s~~~~~~fi~lfls 746 (924)
|++|.+|+++. ++|++ .+++++.||+.|+...++++.+++.++++++|+++++++..++......+..+ +++
T Consensus 383 W~~G~~q~l~~-~~pl~---~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~----~lp 454 (802)
T 4hg6_A 383 WATGMMQMLLL-KNPLF---RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAY----MPG 454 (802)
T ss_dssp HHHHHHHHHHH-SCTTS---CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHH----HHH
T ss_pred HHccHHHHHHH-hCccc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHH----HHH
Confidence 99999999985 57876 68899999999999999999999999999999999999998876543332222 222
Q ss_pred HHHHHHHHh--hccCccccccccchhhHHHhhHHHHHHHHHHHHHHH-HcCCCCCeEeCcCCCCCCccccccccccccch
Q 002425 747 IAATGILEM--QWGGVGIHDWWRNEQFWVIGGASSHLFALIQGLLKV-VGGVNTNFTVTSKAADDGEFSDLYLFKWTSLL 823 (924)
Q Consensus 747 ~~~~~lLe~--rwsG~s~~~wWr~e~~W~I~~vs~~lfav~~aLlk~-L~g~~~~F~VTpKg~~~~~~~~ly~f~ws~l~ 823 (924)
+++..++.. .+.+.. ..|| ++.++.+.. +..+.+++.. +++++.+|+||+|+...+... + + .++
T Consensus 455 ~~l~~~~~~~~~~~~~r-~~~~-~~l~~~~~~-----~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~~----~-~-~~~ 521 (802)
T 4hg6_A 455 YLAVSFLVQNALFARQR-WPLV-SEVYEVAQA-----PYLARAIVTTLLRPRSARFAVTAKDETLSENY----I-S-PIY 521 (802)
T ss_dssp HHHHHHHHHHHHHTTTS-CTTH-HHHHHHHHH-----HHHHHHHHHHHHSTTCCCCCCCCCCCCCSSCC----B-C-TTC
T ss_pred HHHHHHHHHHHHhcCcH-HHHH-HHHHHHHHH-----HHHHHHHHHHHhCCCCCcceECCCCccccccc----h-h-hHH
Confidence 222211111 111111 1222 233332221 1223343333 467889999999998643321 2 2 467
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 002425 824 IPPLTLLVFNLIGVIIGVADAISNGYETWGPLFGKLFFSLWVILHLYPFLKGFL 877 (924)
Q Consensus 824 iP~~~Llllnlvaiv~gi~~~i~~g~~~~~~~~g~l~~~~Wvv~nl~p~l~aL~ 877 (924)
.|++++++++++++++|+++....+. +..+.+++++|+++|++.+..++.
T Consensus 522 ~p~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l~~~~~ 571 (802)
T 4hg6_A 522 RPLLFTFLLCLSGVLATLVRWVAFPG----DRSVLLVVGGWAVLNVLLVGFALR 571 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGG----GHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC----ccchhhhhhHHHHHHHHHHHHHHH
Confidence 89999999999999999998875432 355678999999999999988884
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.55 E-value=3.8e-14 Score=166.81 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=99.7
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
+...|.|+|+||||| |+ ..+..|+.|+++.+||. .+.|+|+|||+++-|.+.+.+
T Consensus 89 ~~~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~-------------------- 143 (625)
T 2z86_A 89 QLIIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE-------------------- 143 (625)
T ss_dssp -CCCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT--------------------
T ss_pred cccCCcEEEEEecCC---cH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH--------------------
Confidence 457899999999998 74 79999999999999986 789999999998732221000
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+.
T Consensus 144 -----------------------------------------~~------------------------------------- 145 (625)
T 2z86_A 144 -----------------------------------------FE------------------------------------- 145 (625)
T ss_dssp -----------------------------------------TT-------------------------------------
T ss_pred -----------------------------------------hh-------------------------------------
Confidence 00
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCc
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGK 433 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~-Dp~~g~ 433 (924)
.-+++.|+.+++ +.+.||+|+|.+++ .+.++||+++|+|++ +.|++|.+++..|. +|
T Consensus 146 ---------~~~~i~~i~~~~----~~~g~~~a~N~g~~----~a~g~~v~~lD~D~~-~~~~~l~~~~~~~~~~~---- 203 (625)
T 2z86_A 146 ---------SLLNIKYVRQKD----YGYQLCAVRNLGLR----AAKYNYVAILDCDMA-PNPLWVQSYMELLAVDD---- 203 (625)
T ss_dssp ---------TTSCEEEEEECC----CSCCHHHHHHHHHH----HCCSSEEEEECTTEE-ECTTHHHHHHHHHHHCT----
T ss_pred ---------hcCCeEEEEeCC----CCcchhHHHHHHHH----hCCcCEEEEECCCCC-CCHHHHHHHHHHHhcCC----
Confidence 002477887654 34579999999999 479999999999995 68999999999875 67
Q ss_pred ceEEEecCceecCCC
Q 002425 434 KICYVQFPQRFDGID 448 (924)
Q Consensus 434 ~va~VQ~PQ~F~n~d 448 (924)
+++.|+..+.+++..
T Consensus 204 ~~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 204 NVALIGPRKYIDTSK 218 (625)
T ss_dssp TEEEECCEEEECCTT
T ss_pred ceEEEEeeeeccCcc
Confidence 688888877766543
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.46 E-value=8.2e-13 Score=150.49 Aligned_cols=116 Identities=16% Similarity=0.081 Sum_probs=90.9
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchh-hHHHhhhhHHHhhhhHhHHHhhCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAML-TFEALSETSEFARKWVPFCKKFKIEP 273 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~-t~~~l~E~~~FA~~WvpfCkk~~iep 273 (924)
++.+|.|.|+||||| |+...+.+||.|+++.+||.....|+|.|||+++- |.+.|.
T Consensus 25 ~~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~-------------------- 81 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE-------------------- 81 (472)
T ss_dssp CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH--------------------
T ss_pred CcCCCCeEEEEEeCC---CCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHH--------------------
Confidence 467999999999999 88789999999999999997667999999999861 222111
Q ss_pred CCchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeec
Q 002425 274 RAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLG 353 (924)
Q Consensus 274 raPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~ 353 (924)
++ ++
T Consensus 82 ----------------------------------~~-------~~----------------------------------- 85 (472)
T 1xhb_A 82 ----------------------------------SY-------VK----------------------------------- 85 (472)
T ss_dssp ----------------------------------HH-------HH-----------------------------------
T ss_pred ----------------------------------HH-------HH-----------------------------------
Confidence 11 00
Q ss_pred CCCcccccCCccC-cEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CC
Q 002425 354 QNGVRDIEGNLLP-RLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DP 429 (924)
Q Consensus 354 ~~g~~d~~~~~lP-~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~-Dp 429 (924)
..| ++.++..+++ ..+++|+|.+++ .+.|+||+.+|+|.. .+|++|.+++..+. +|
T Consensus 86 ----------~~~~~v~vi~~~~n-----~G~~~a~N~g~~----~A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~~ 143 (472)
T 1xhb_A 86 ----------KLKVPVHVIRMEQR-----SGLIRARLKGAA----VSRGQVITFLDAHCE-CTAGWLEPLLARIKHDR 143 (472)
T ss_dssp ----------SSSSCEEEEECSSC-----CCHHHHHHHHHH----HCCSSEEEEEESSEE-ECTTCHHHHHHHHHHCT
T ss_pred ----------HCCCcEEEEECCCC-----CChHHHHHHHHH----hccCCeEEEECCCeE-eCccHHHHHHHHHHhCC
Confidence 012 4777777663 349999999999 478999999999985 78999999999775 55
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.41 E-value=9.6e-13 Score=134.58 Aligned_cols=110 Identities=14% Similarity=0.184 Sum_probs=85.2
Q ss_pred CCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCc
Q 002425 197 DLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAP 276 (924)
Q Consensus 197 ~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraP 276 (924)
..|.|.|+||||| ++ ..+.+++.|+++++|| .+.|+|.|||+++-|.+.+.+
T Consensus 3 ~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~---------------------- 54 (240)
T 3bcv_A 3 LIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDD---------------------- 54 (240)
T ss_dssp CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHH----------------------
T ss_pred CCCcEEEEEecCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHHHH----------------------
Confidence 4688999999999 65 6889999999999998 488999999998744331111
Q ss_pred hhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCC
Q 002425 277 EWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNG 356 (924)
Q Consensus 277 e~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g 356 (924)
|.+
T Consensus 55 -----------------------------~~~------------------------------------------------ 57 (240)
T 3bcv_A 55 -----------------------------YAA------------------------------------------------ 57 (240)
T ss_dssp -----------------------------HHH------------------------------------------------
T ss_pred -----------------------------HHh------------------------------------------------
Confidence 100
Q ss_pred cccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 357 VRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 357 ~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
..|++.|+..+ ...+++|.|.+++ .++|+||+.+|+|.+ ..|++|.+.+..+.++
T Consensus 58 -------~~~~i~~i~~~------n~G~~~a~N~g~~----~a~g~~i~~lD~Dd~-~~~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 58 -------QYPNIKVIHKK------NAGLGMACNSGLD----VATGEYVAFCDSDDY-VDSDMYMTMYNVAQKY 112 (240)
T ss_dssp -------HCSSEEEEECC------CCCHHHHHHHHHH----HCCSSEEEECCTTCC-CCTTHHHHHHHHHHHH
T ss_pred -------hCCCEEEEECC------CCChHHHHHHHHH----HcCCCEEEEECCCCc-CCHHHHHHHHHHHHhc
Confidence 01246666532 3469999999999 579999999999995 6899999999988764
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.41 E-value=2.3e-13 Score=140.70 Aligned_cols=124 Identities=13% Similarity=0.252 Sum_probs=93.5
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||||| ++ ..+.+|+.|+++++|| .+.|+|.|||+++-|.+.+.+
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~------------------------ 50 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRP------------------------ 50 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGG------------------------
T ss_pred CeEEEEEEcCC---CH-HHHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHHHH------------------------
Confidence 67999999998 65 6899999999999998 588999999998743331111
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
+. .
T Consensus 51 -------------------------------------~~-----------------------------------~----- 53 (255)
T 1qg8_A 51 -------------------------------------FL-----------------------------------N----- 53 (255)
T ss_dssp -------------------------------------GG-----------------------------------G-----
T ss_pred -------------------------------------Hh-----------------------------------h-----
Confidence 00 0
Q ss_pred cccCCccCcEEEEecccCCCC----CCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhc-CCCCCc
Q 002425 359 DIEGNLLPRLVYVSREKRPGF----DHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM-DPTSGK 433 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~----~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~-Dp~~g~ 433 (924)
-|++.|+..+.. +. ....+++|+|.+++ .++|+||+.+|+|.+ ..|++|.+++..+. +|
T Consensus 54 ------~~~i~~i~~~~~-~~~~~~~n~G~~~a~N~gi~----~a~g~~i~~lD~Dd~-~~~~~l~~~~~~~~~~~---- 117 (255)
T 1qg8_A 54 ------DNRVRFYQSDIS-GVKERTEKTRYAALINQAIE----MAEGEYITYATDDNI-YMPDRLLKMVRELDTHP---- 117 (255)
T ss_dssp ------STTEEEEECCCC-SHHHHHSSCHHHHHHHHHHH----HCCCSEEEEEETTEE-ECTTHHHHHHHHHHHCT----
T ss_pred ------cCCEEEEecccc-cccccccccCHHHHHHHHHH----HcCCCEEEEeCCCCc-cChHHHHHHHHHHHhCC----
Confidence 024677766510 00 13469999999999 579999999999996 58999999998775 67
Q ss_pred ceEEEecCceec
Q 002425 434 KICYVQFPQRFD 445 (924)
Q Consensus 434 ~va~VQ~PQ~F~ 445 (924)
++++|.+...+.
T Consensus 118 ~~~~v~~~~~~~ 129 (255)
T 1qg8_A 118 EKAVIYSASKTY 129 (255)
T ss_dssp TCCEEEEEEEEE
T ss_pred CceEEEeceEEE
Confidence 678888877665
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.40 E-value=2.3e-12 Score=151.41 Aligned_cols=115 Identities=17% Similarity=0.119 Sum_probs=90.2
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhh-HHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLT-FEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t-~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
+.+|.|.|+||||| |+...+.+||.|+++..||...+.|+|.|||+++-| .+.|
T Consensus 109 ~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l---------------------- 163 (570)
T 2d7i_A 109 ETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPL---------------------- 163 (570)
T ss_dssp SSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHH----------------------
T ss_pred CCCCCeEEEEEECC---CCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHH----------------------
Confidence 56899999999999 877899999999999999975668999999998743 1111
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+++ ++
T Consensus 164 --------------------------------~~~-------~~------------------------------------ 168 (570)
T 2d7i_A 164 --------------------------------EDY-------MA------------------------------------ 168 (570)
T ss_dssp --------------------------------HHH-------HT------------------------------------
T ss_pred --------------------------------HHH-------HH------------------------------------
Confidence 111 00
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
..|++.++..+++ ..+++|+|.+++ .+.|+||+.+|+|.. .+|++|.+++..+.+.
T Consensus 169 ---------~~~~v~vi~~~~n-----~G~~~A~N~G~~----~A~gd~i~fLD~D~~-~~p~~L~~ll~~l~~~ 224 (570)
T 2d7i_A 169 ---------LFPSVRILRTKKR-----EGLIRTRMLGAS----VATGDVITFLDSHCE-ANVNWLPPLLDRIARN 224 (570)
T ss_dssp ---------TSTTEEEEECSSC-----CCHHHHHHHHHH----HCCSSEEEECCSSEE-ECTTCSHHHHHHHHHC
T ss_pred ---------hCCeEEEEECCCC-----CCHHHHHHHHHH----hcCCCEEEEEcCCcc-ccccHHHHHHHHHHhC
Confidence 0135777776653 469999999999 478999999999995 5899999999977543
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.37 E-value=2.9e-12 Score=147.47 Aligned_cols=113 Identities=17% Similarity=0.096 Sum_probs=89.9
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCC
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPR 274 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepr 274 (924)
+..+|.|.|+||||| |+...+.+||.|+++..||...+.|+|.|||+++-|.+.+
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---------------------- 116 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---------------------- 116 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG----------------------
T ss_pred CcCCCCEEEEEEeCc---CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH----------------------
Confidence 467999999999999 8766899999999999999766799999999987321100
Q ss_pred CchhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecC
Q 002425 275 APEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQ 354 (924)
Q Consensus 275 aPe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~ 354 (924)
+ +
T Consensus 117 -----------------------------------------~-~------------------------------------ 118 (501)
T 2ffu_A 117 -----------------------------------------L-G------------------------------------ 118 (501)
T ss_dssp -----------------------------------------G-G------------------------------------
T ss_pred -----------------------------------------H-h------------------------------------
Confidence 0 0
Q ss_pred CCcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 355 NGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 355 ~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
..|++.|+..+++ ..+++|+|.+++ .+.|+||+.+|+|.. .+|++|.+++..+.+.
T Consensus 119 ---------~~~~v~vi~~~~n-----~G~~~A~N~G~~----~A~gd~i~flD~D~~-~~p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 119 ---------KIEKVRVLRNDRR-----EGLMRSRVRGAD----AAQAKVLTFLDSHCE-CNEHWLEPLLERVAED 174 (501)
T ss_dssp ---------GBTTEEEEECSSC-----CHHHHHHHHHHH----HCCSSEEEECCSSEE-ECTTCHHHHHHHHHHC
T ss_pred ---------cCCCEEEEECCCC-----cCHHHHHHHHHH----hcCCCEEEEECCCcc-cCccHHHHHHHHHHhC
Confidence 0235778877653 359999999999 478999999999985 6899999999977544
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.30 E-value=1.1e-11 Score=145.89 Aligned_cols=126 Identities=20% Similarity=0.267 Sum_probs=95.3
Q ss_pred CCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCC
Q 002425 196 SDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRA 275 (924)
Q Consensus 196 ~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepra 275 (924)
...|.|.|+||||| ++ ..+.+++.|+++++|| .+.|+|+|||+++-|.+-+.+
T Consensus 372 ~~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~--------------------- 424 (625)
T 2z86_A 372 KRVPLVSIYIPAYN---CS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQE--------------------- 424 (625)
T ss_dssp CSSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHH---------------------
T ss_pred ccCCeEEEEEeCCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHHH---------------------
Confidence 34688999999999 54 6889999999999998 488999999998744331111
Q ss_pred chhhhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCC
Q 002425 276 PEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQN 355 (924)
Q Consensus 276 Pe~yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~ 355 (924)
+ .+
T Consensus 425 ---------------------------------~-------~~------------------------------------- 427 (625)
T 2z86_A 425 ---------------------------------H-------YA------------------------------------- 427 (625)
T ss_dssp ---------------------------------H-------HT-------------------------------------
T ss_pred ---------------------------------H-------Hh-------------------------------------
Confidence 0 00
Q ss_pred CcccccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcc
Q 002425 356 GVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKK 434 (924)
Q Consensus 356 g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~ 434 (924)
..|++.++. ++ ...+++|+|.+++ .++|+||+.+|+|.+ ..|++|.+.+..| .+| +
T Consensus 428 --------~~~~i~~~~-~~-----n~G~~~a~n~g~~----~a~g~~i~~ld~D~~-~~~~~l~~~~~~~~~~~----~ 484 (625)
T 2z86_A 428 --------NHPRVRFIS-QK-----NKGIGSASNTAVR----LCRGFYIGQLDSDDF-LEPDAVELCLDEFRKDL----S 484 (625)
T ss_dssp --------TCTTEEEEE-EC-----CCCHHHHHHHHHH----HCCSSEEEECCTTCE-ECTTHHHHHHHHHHHCT----T
T ss_pred --------hCCcEEEEe-CC-----CCCHHHHHHHHHH----hcCCCEEEEECCCcc-cChhHHHHHHHHHHhCC----C
Confidence 012466775 32 3469999999999 579999999999995 6899999999866 577 6
Q ss_pred eEEEecCceecCCC
Q 002425 435 ICYVQFPQRFDGID 448 (924)
Q Consensus 435 va~VQ~PQ~F~n~d 448 (924)
+++|.+...+.+.+
T Consensus 485 ~~~v~~~~~~~~~~ 498 (625)
T 2z86_A 485 LACVYTTNRNIDRE 498 (625)
T ss_dssp CSEEEEEEEEECTT
T ss_pred eeEEEeeeEEECCC
Confidence 88888877665443
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.96 E-value=2.8e-09 Score=127.58 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=40.6
Q ss_pred CCCCCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCcc-EEEEcCCCCch
Q 002425 195 PSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKV-ACYVSDDGAAM 246 (924)
Q Consensus 195 ~~~lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl-~~yvsDDG~~~ 246 (924)
+..-|.|.|+||||| + ...+.+++.|+++..|+.++. .|+|.|||+++
T Consensus 176 ~~~~pkVSVVIptYN---~-~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD 224 (657)
T 4fix_A 176 APGTANIAVGIPTFN---R-PADCVNALRELTADPLVDQVIGAVIVPDQGERK 224 (657)
T ss_dssp CCSCCCEEEECCBSS---C-HHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSC
T ss_pred CCCCCeEEEEEEecC---C-HHHHHHHHHHHHcCccccCCCCEEEEEECcCCC
Confidence 345689999999998 5 468999999999999966655 89999999975
No 10
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.91 E-value=1.3e-10 Score=140.03 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=0.0
Q ss_pred CceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhhHHHhhhhHHHhhhhHhHHHhhCCCCCCchh
Q 002425 199 ADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEW 278 (924)
Q Consensus 199 p~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t~~~l~E~~~FA~~WvpfCkk~~iepraPe~ 278 (924)
|.|.|+||||| ++ ..+..|+.|+++++|| .+.|+|.|||+++-|.+-+.+
T Consensus 2 p~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~------------------------ 51 (729)
T 3l7i_A 2 NKLTIIVTYYN---AE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDE------------------------ 51 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHHH------------------------
Confidence 67999999999 65 6889999999999999 578999999998744332211
Q ss_pred hhhhccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccCCCCCCCCCCcCCCccceeeeecCCCcc
Q 002425 279 YFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVR 358 (924)
Q Consensus 279 yF~~~~~~~~~~~~~~f~~e~~~mkr~yee~k~ri~~l~~~~~~~p~~~w~m~dg~~w~~~~~rdhp~~iqv~~~~~g~~ 358 (924)
|.+ .|+
T Consensus 52 ---------------------------~~~----------------------------------~~~------------- 57 (729)
T 3l7i_A 52 ---------------------------AIK----------------------------------DYD------------- 57 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------HHH----------------------------------hCC-------------
Confidence 000 000
Q ss_pred cccCCccCcEEEEecccCCCCCCCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcCC
Q 002425 359 DIEGNLLPRLVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDP 429 (924)
Q Consensus 359 d~~~~~lP~lvYvsRekrpg~~hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~Dp 429 (924)
+++.|+..++ ...+++|.|.+++ .++|+||+.+|+|.+ ..|++|.+.+..+.++
T Consensus 58 -------~~i~~i~~~~-----n~G~~~arN~gi~----~A~gdyI~flD~Dd~-~~p~~l~~l~~~l~~~ 111 (729)
T 3l7i_A 58 -------KNIRFIDLDE-----NSGHAHARNIALE----EVETPYFMFLDADDE-LASYAITFYLEKFNNT 111 (729)
T ss_dssp -----------------------------------------------------------------------
T ss_pred -------CCEEEEECCC-----CCCHHHHHHHHHH----hccCCEEEEECCCCC-CChhHHHHHHHHhcCC
Confidence 1355665554 3458999999999 579999999999996 5899999999988755
No 11
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.91 E-value=4.2e-09 Score=115.04 Aligned_cols=55 Identities=15% Similarity=0.021 Sum_probs=45.0
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHh-hcCCCCCcceEEEecCce
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCF-MMDPTSGKKICYVQFPQR 443 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~f-f~Dp~~g~~va~VQ~PQ~ 443 (924)
...|++|+|.+++ .++|+||+.+|+|.....|++|.+.+.. +.+| ++++|+....
T Consensus 116 n~G~~~a~n~g~~----~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~----~~~~v~g~~~ 171 (329)
T 3ckj_A 116 RPGKGEALWRSLA----ASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGD----GVHLVKSFYR 171 (329)
T ss_dssp CCSHHHHHHHHHH----HCCCSEEEECCTTEESCCTTHHHHHHHHHHSCS----SCCEEEEEEE
T ss_pred CCCHHHHHHHHHH----hCCCCEEEEECCCCCCcChHHHHHHHHHHHhCC----CccEEEEEec
Confidence 3569999999999 4789999999999842689999999987 5677 6778877543
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=98.60 E-value=5.4e-08 Score=105.36 Aligned_cols=53 Identities=11% Similarity=-0.065 Sum_probs=40.0
Q ss_pred cchHHHHHHHHHCCCEEEEecCCCCcc----------ccCCCCCHHHHHHHHHHHhhhhHHHH
Q 002425 623 TEDILTGFKMHCHGWRSVYCIPKRPAF----------KGSAPINLSDRLHQVLRWALGSVEIL 675 (924)
Q Consensus 623 TED~~tg~rL~~~GwrsvY~~p~~~af----------~G~aP~tl~~~l~QR~RWA~G~lQil 675 (924)
.||.++..|++.+||++.+..+....+ ....|+.+..+.+||.||+.+++..+
T Consensus 201 ~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 201 GEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp CHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred cchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 499999999999999887432211100 23578999999999999999999876
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.22 E-value=2.6e-06 Score=95.96 Aligned_cols=52 Identities=17% Similarity=0.201 Sum_probs=42.3
Q ss_pred CCCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhh-cCCCCCcceEEEec
Q 002425 381 HHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFM-MDPTSGKKICYVQF 440 (924)
Q Consensus 381 hh~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff-~Dp~~g~~va~VQ~ 440 (924)
...|++|+|.+++ .++++||+.+|||....+|++|.+.+..+ .+| ++.+|..
T Consensus 164 n~G~g~A~n~G~~----~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p----~~d~v~G 216 (387)
T 3f1y_A 164 AHGKGDAMWRALS----VTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVP----GVRFVKA 216 (387)
T ss_dssp CCSHHHHHHHHTT----TCCSSEEEECCTTCSSCCTHHHHTTHHHHHHST----TCCEEEE
T ss_pred cCCHHHHHHHHHH----hcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCC----CceEEEE
Confidence 3569999999998 57899999999998426899999999866 567 4666665
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=97.91 E-value=9.7e-05 Score=77.32 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=38.0
Q ss_pred hhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHHHhhcC-----CCCCcceEEE
Q 002425 385 AGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMD-----PTSGKKICYV 438 (924)
Q Consensus 385 AGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am~ff~D-----p~~g~~va~V 438 (924)
|.|+|.+++ .+.|+||+.+|+|.++ .+++|.+.+.++.+ | +++.|
T Consensus 63 a~a~N~Gi~----~A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~----~vg~v 112 (249)
T 2nxv_A 63 FSWHKQMLP----RCKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADP----KWLVA 112 (249)
T ss_dssp TTHHHHHGG----GCCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCT----TEEEE
T ss_pred HHHHHHHHH----hcCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCC----CeeEE
Confidence 788999998 5789999999999965 88999999988763 7 57665
No 15
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=96.17 E-value=0.0084 Score=66.55 Aligned_cols=44 Identities=23% Similarity=0.187 Sum_probs=37.7
Q ss_pred CCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCch
Q 002425 198 LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 246 (924)
Q Consensus 198 lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~ 246 (924)
|+.+-|+|+||| -| . +..++.|+++...+.++..++|+|||...
T Consensus 1 ~~~~pViI~~yN---Rp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~ 44 (343)
T 1fo8_A 1 LAVIPILVIACD---RS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHE 44 (343)
T ss_dssp CCCCCEEEEESS---CT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCH
T ss_pred CCcccEEEEECC---cH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCH
Confidence 355779999998 77 6 99999999999977778889999999864
No 16
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=95.64 E-value=0.057 Score=61.01 Aligned_cols=46 Identities=15% Similarity=0.004 Sum_probs=34.8
Q ss_pred CCCchhhhHHHHHhhcc-ccCCCEEEEecCCCCCCcHHHHHHHHHhhc
Q 002425 381 HHKKAGAMNALIRVSAV-ISNAPYLLNVDCDHYINNSKALREAMCFMM 427 (924)
Q Consensus 381 hh~KAGalN~llrvs~~-~tn~p~il~lDaD~yv~~~~~Lr~am~ff~ 427 (924)
...|.+|+|++++. |. ..+|++|+.+|||..-.+|+.+.+.+..+.
T Consensus 73 n~GkG~Al~~G~~~-Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRY-FLEETQWERIHFYDADITSFGPDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHH-HHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-HHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 35799999999921 00 478999999999973137999999887553
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=95.16 E-value=0.086 Score=59.47 Aligned_cols=39 Identities=28% Similarity=0.319 Sum_probs=29.6
Q ss_pred CCchhhhHHHHHhhccccCCCEEEEecCCCCCCcHHHHHHHH
Q 002425 382 HKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAM 423 (924)
Q Consensus 382 h~KAGalN~llrvs~~~tn~p~il~lDaD~yv~~~~~Lr~am 423 (924)
..|..||-+++.+.. ..++++|+.+|||-|+ |..+.+..
T Consensus 143 ~GKG~Am~aGl~~A~-~~~gd~Vv~~DaDl~i--P~~v~~~~ 181 (394)
T 2zu9_A 143 SGKGEGMLVGLLLAK-AIGAEYVGFVDADNYI--PGAVNEYV 181 (394)
T ss_dssp CSHHHHHHHHHHHHH-HTTCSEEEECCSCBSC--HHHHHHHH
T ss_pred CChHHHHHHHHHHHh-hCCCCEEEEEeCCCCC--HHHHHHHH
Confidence 379999999998531 1189999999999864 67775544
No 18
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=92.80 E-value=0.33 Score=54.14 Aligned_cols=42 Identities=17% Similarity=0.093 Sum_probs=32.9
Q ss_pred CCceeEEEecCCCCCCChHHHHHHHHHHHcCCCCCCccEEEEcCCCCchhh
Q 002425 198 LADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLT 248 (924)
Q Consensus 198 lp~VDvfV~t~dp~kEp~~~~~~Tvls~la~dYP~~kl~~yvsDDG~~~~t 248 (924)
+..+.|+||+|| |.. +++-++++.-|. ...|.|.|||..+-|
T Consensus 52 ~~klSIVVPvYN---Ee~----~lLesVl~qi~~--d~eIIlVdDGS~D~s 93 (391)
T 2wvl_A 52 LEQTAIVVPTRN---ERL----KLLEGVLSGIPH--EALILVASNSSPDRF 93 (391)
T ss_dssp HTTEEEEEEESS---CCH----HHHHHHHHTSCT--TSEEEEEECCCHHHH
T ss_pred HhceEEEEeccC---cHH----HHHHHHHhcCCC--CceEEEEECCCCCCh
Confidence 567899999999 875 357777777765 478999999997643
No 19
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=23.09 E-value=90 Score=31.98 Aligned_cols=28 Identities=11% Similarity=0.178 Sum_probs=23.2
Q ss_pred CCEEEEecCCCCCCcHHHHHHHHHhhcC
Q 002425 401 APYLLNVDCDHYINNSKALREAMCFMMD 428 (924)
Q Consensus 401 ~p~il~lDaD~yv~~~~~Lr~am~ff~D 428 (924)
.++|+++|||+=.-.++.+++.+..+.+
T Consensus 100 ~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 100 PEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 5899999999854578999999887755
Done!