Query 002429
Match_columns 923
No_of_seqs 425 out of 2105
Neff 6.2
Searched_HMMs 46136
Date Thu Mar 28 23:46:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002429.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002429hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2194 Aminopeptidases of the 100.0 5E-135 1E-139 1190.2 59.0 796 33-915 3-834 (834)
2 PRK10199 alkaline phosphatase 100.0 1.1E-26 2.3E-31 257.5 28.2 260 86-367 30-345 (346)
3 PF04389 Peptidase_M28: Peptid 99.9 1.9E-28 4E-33 249.6 9.2 170 180-350 1-179 (179)
4 KOG2195 Transferrin receptor a 99.9 1.2E-21 2.6E-26 233.7 16.7 204 159-372 335-552 (702)
5 KOG3946 Glutaminyl cyclase [Po 99.8 2E-18 4.4E-23 181.4 20.4 249 82-362 46-334 (338)
6 COG2234 Iap Predicted aminopep 99.7 2.5E-16 5.4E-21 182.4 12.5 173 177-360 206-390 (435)
7 TIGR03176 AllC allantoate amid 99.5 3.5E-13 7.5E-18 155.3 14.9 127 87-247 3-141 (406)
8 PRK09133 hypothetical protein; 99.4 2E-12 4.3E-17 151.8 17.1 150 82-261 32-203 (472)
9 PRK12890 allantoate amidohydro 99.4 2E-12 4.4E-17 149.1 16.6 128 85-246 7-145 (414)
10 PRK12891 allantoate amidohydro 99.4 3E-12 6.4E-17 147.9 16.2 128 83-244 6-145 (414)
11 PRK08262 hypothetical protein; 99.4 3.8E-12 8.3E-17 149.9 17.2 170 42-246 2-201 (486)
12 TIGR01879 hydantase amidase, h 99.4 3.8E-12 8.3E-17 146.3 15.8 126 88-247 2-139 (401)
13 PRK09290 allantoate amidohydro 99.4 6.4E-12 1.4E-16 145.0 16.7 130 84-247 4-145 (413)
14 PRK06133 glutamate carboxypept 99.4 1.7E-11 3.8E-16 141.4 18.9 145 85-262 35-197 (410)
15 PRK13590 putative bifunctional 99.4 6E-12 1.3E-16 151.5 15.4 128 85-245 179-321 (591)
16 PRK08596 acetylornithine deace 99.3 1.8E-11 3.9E-16 141.7 18.1 144 87-262 13-178 (421)
17 PRK13799 unknown domain/N-carb 99.3 6.3E-12 1.4E-16 151.3 14.6 127 85-245 179-321 (591)
18 PRK07473 carboxypeptidase; Pro 99.3 3.1E-11 6.8E-16 137.8 18.5 149 84-263 8-174 (376)
19 PRK12892 allantoate amidohydro 99.3 1.9E-11 4.1E-16 140.8 16.4 129 84-247 7-146 (412)
20 PRK12893 allantoate amidohydro 99.3 1.9E-11 4.1E-16 140.9 16.0 130 84-247 7-148 (412)
21 PRK08588 succinyl-diaminopimel 99.3 2.7E-11 5.8E-16 137.8 16.2 139 87-261 2-161 (377)
22 TIGR01910 DapE-ArgE acetylorni 99.3 2.6E-11 5.6E-16 137.9 15.9 145 91-262 2-167 (375)
23 PRK07906 hypothetical protein; 99.3 3.6E-11 7.7E-16 139.2 14.8 130 90-248 2-155 (426)
24 PRK07338 hypothetical protein; 99.3 7.9E-11 1.7E-15 135.2 17.0 157 86-262 16-190 (402)
25 PRK09104 hypothetical protein; 99.3 8.6E-11 1.9E-15 137.7 17.1 146 85-261 15-190 (464)
26 PRK07907 hypothetical protein; 99.3 9.8E-11 2.1E-15 136.7 17.5 143 86-262 17-184 (449)
27 PRK06446 hypothetical protein; 99.2 7.8E-11 1.7E-15 137.0 16.0 128 87-248 2-151 (436)
28 TIGR01880 Ac-peptdase-euk N-ac 99.2 9.8E-11 2.1E-15 134.4 16.4 147 83-260 5-173 (400)
29 PRK13983 diaminopimelate amino 99.2 1.7E-10 3.6E-15 132.0 17.9 149 87-260 5-180 (400)
30 PRK13013 succinyl-diaminopimel 99.2 1.8E-10 3.8E-15 133.3 17.4 152 86-261 13-187 (427)
31 KOG2275 Aminoacylase ACY1 and 99.2 9.9E-11 2.2E-15 130.7 14.5 145 88-262 26-192 (420)
32 PRK08201 hypothetical protein; 99.2 1.5E-10 3.2E-15 135.4 16.8 147 86-262 13-183 (456)
33 PRK04443 acetyl-lysine deacety 99.2 2E-10 4.4E-15 129.5 15.5 133 85-262 4-148 (348)
34 TIGR01893 aa-his-dipept aminoa 99.2 1.9E-10 4.1E-15 135.4 15.7 137 86-263 3-166 (477)
35 PRK06837 acetylornithine deace 99.2 3.6E-10 7.8E-15 131.1 16.5 145 86-245 19-184 (427)
36 PRK05469 peptidase T; Provisio 99.2 3.8E-10 8.3E-15 130.0 16.6 127 87-245 2-185 (408)
37 PRK07079 hypothetical protein; 99.2 3.4E-10 7.4E-15 132.9 16.2 148 84-260 14-189 (469)
38 PRK06915 acetylornithine deace 99.2 5.3E-10 1.2E-14 129.3 17.3 156 86-260 16-192 (422)
39 TIGR01883 PepT-like peptidase 99.2 4E-10 8.8E-15 127.4 15.3 128 88-246 1-146 (361)
40 PRK13381 peptidase T; Provisio 99.1 5.5E-10 1.2E-14 128.6 16.3 126 88-246 2-184 (404)
41 PRK13007 succinyl-diaminopimel 99.1 6.3E-10 1.4E-14 125.3 16.1 132 87-261 7-155 (352)
42 COG1363 FrvX Cellulase M and r 99.1 4.8E-09 1E-13 117.7 22.6 226 87-365 2-348 (355)
43 PRK07318 dipeptidase PepV; Rev 99.1 5.8E-10 1.3E-14 130.9 15.7 127 86-248 13-167 (466)
44 PRK07522 acetylornithine deace 99.1 7.4E-10 1.6E-14 126.2 15.6 141 87-261 4-165 (385)
45 PRK00466 acetyl-lysine deacety 99.1 7.9E-10 1.7E-14 124.6 15.6 129 86-263 9-149 (346)
46 PRK08652 acetylornithine deace 99.1 6.6E-10 1.4E-14 124.6 14.9 130 87-261 2-143 (347)
47 PRK07205 hypothetical protein; 99.1 9.4E-10 2E-14 128.3 16.6 127 85-247 9-164 (444)
48 PRK15026 aminoacyl-histidine d 99.1 1.6E-09 3.4E-14 127.8 18.2 138 84-262 7-171 (485)
49 PF05450 Nicastrin: Nicastrin; 99.1 1.8E-09 3.9E-14 115.4 16.9 166 180-346 1-200 (234)
50 TIGR01892 AcOrn-deacetyl acety 99.1 8.5E-10 1.9E-14 124.6 15.2 124 92-248 2-145 (364)
51 TIGR01882 peptidase-T peptidas 99.1 1.8E-09 3.8E-14 124.8 16.6 128 87-245 3-187 (410)
52 PF09940 DUF2172: Domain of un 99.1 5.8E-09 1.2E-13 115.9 19.4 241 83-366 56-308 (386)
53 COG4882 Predicted aminopeptida 99.1 2E-09 4.4E-14 117.4 14.9 171 162-366 178-360 (486)
54 PRK05111 acetylornithine deace 99.1 2.4E-09 5.2E-14 122.1 16.5 128 87-247 5-157 (383)
55 PRK06156 hypothetical protein; 99.1 5.2E-09 1.1E-13 124.6 19.3 138 85-261 44-213 (520)
56 TIGR03106 trio_M42_hydro hydro 99.0 1.1E-08 2.4E-13 115.5 20.6 147 197-360 181-339 (343)
57 PRK08651 succinyl-diaminopimel 99.0 3.1E-09 6.8E-14 121.6 16.6 149 86-263 5-173 (394)
58 PRK13009 succinyl-diaminopimel 99.0 2.2E-09 4.9E-14 121.9 14.9 122 88-245 3-146 (375)
59 PF01546 Peptidase_M20: Peptid 99.0 1.1E-09 2.5E-14 111.5 11.3 165 183-361 1-188 (189)
60 COG0624 ArgE Acetylornithine d 99.0 2.8E-09 6.1E-14 122.8 15.8 145 87-261 13-180 (409)
61 TIGR01886 dipeptidase dipeptid 99.0 2.2E-09 4.9E-14 126.0 14.7 126 87-248 13-166 (466)
62 PRK08554 peptidase; Reviewed 99.0 4.2E-09 9.1E-14 122.8 16.3 141 88-263 2-166 (438)
63 PRK13004 peptidase; Reviewed 99.0 8E-09 1.7E-13 118.8 16.3 136 86-261 14-171 (399)
64 TIGR01246 dapE_proteo succinyl 99.0 6.8E-09 1.5E-13 117.9 15.0 135 90-260 2-159 (370)
65 TIGR01900 dapE-gram_pos succin 99.0 7E-09 1.5E-13 118.4 15.0 134 93-262 2-170 (373)
66 TIGR01902 dapE-lys-deAc N-acet 99.0 5.9E-09 1.3E-13 117.0 14.0 125 92-263 2-138 (336)
67 TIGR03107 glu_aminopep glutamy 98.9 5.4E-08 1.2E-12 110.0 20.9 149 197-363 176-341 (350)
68 PRK09961 exoaminopeptidase; Pr 98.9 6.3E-08 1.4E-12 109.5 20.6 151 197-363 164-333 (344)
69 TIGR01887 dipeptidaselike dipe 98.9 1.1E-08 2.5E-13 119.5 14.9 124 87-246 2-153 (447)
70 PRK09864 putative peptidase; P 98.9 1.4E-07 3.1E-12 106.6 21.4 146 197-363 173-341 (356)
71 TIGR01891 amidohydrolases amid 98.9 3.5E-08 7.6E-13 112.0 15.5 132 91-262 3-151 (363)
72 TIGR03320 ygeY M20/DapE family 98.8 4.9E-08 1.1E-12 112.1 15.3 122 87-246 13-156 (395)
73 TIGR03526 selenium_YgeY putati 98.8 7E-08 1.5E-12 110.9 16.0 122 87-246 13-156 (395)
74 PRK08737 acetylornithine deace 98.8 6.8E-08 1.5E-12 110.1 14.6 129 86-260 5-154 (364)
75 KOG2526 Predicted aminopeptida 98.8 2.2E-07 4.8E-12 103.7 17.9 195 161-360 192-414 (555)
76 COG4187 RocB Arginine degradat 98.6 2.4E-07 5.1E-12 104.0 11.8 158 83-264 4-209 (553)
77 PLN02693 IAA-amino acid hydrol 98.6 7.3E-07 1.6E-11 104.2 16.1 122 88-247 48-183 (437)
78 PLN02280 IAA-amino acid hydrol 98.6 9.3E-07 2E-11 104.3 16.8 133 90-258 96-243 (478)
79 COG4310 Uncharacterized protei 98.3 3.7E-06 8.1E-11 90.8 12.1 175 178-366 177-356 (435)
80 PF05343 Peptidase_M42: M42 gl 98.1 9.1E-06 2E-10 90.1 9.6 133 197-342 132-282 (292)
81 KOG2276 Metalloexopeptidases [ 98.1 2.9E-05 6.3E-10 87.0 12.3 141 85-247 14-180 (473)
82 KOG2657 Transmembrane glycopro 97.3 0.0023 5E-08 73.9 12.2 188 161-350 156-375 (596)
83 COG2195 PepD Di- and tripeptid 96.3 0.0089 1.9E-07 69.3 7.3 60 198-260 143-203 (414)
84 PF04114 Gaa1: Gaa1-like, GPI 96.1 0.23 5.1E-06 59.4 18.6 184 161-366 2-228 (504)
85 COG1473 AbgB Metal-dependent a 96.0 0.13 2.9E-06 59.5 15.2 127 99-260 21-163 (392)
86 PRK02813 putative aminopeptida 91.4 0.73 1.6E-05 54.2 9.0 141 195-347 230-415 (428)
87 PTZ00371 aspartyl aminopeptida 89.6 2.7 5.8E-05 50.0 11.7 152 195-350 247-445 (465)
88 PRK02256 putative aminopeptida 81.0 2.2 4.7E-05 50.7 5.4 57 182-244 245-301 (462)
89 KOG3566 Glycosylphosphatidylin 62.4 29 0.00063 42.0 8.5 76 161-247 119-194 (617)
90 PRK08126 hypothetical protein; 52.9 3.4E+02 0.0075 32.2 15.4 53 181-234 355-409 (432)
91 PF05297 Herpes_LMP1: Herpesvi 47.9 6.1 0.00013 43.4 0.0 7 394-400 39-45 (381)
92 PF10190 Tmemb_170: Putative t 41.2 2.2E+02 0.0047 27.3 9.2 49 421-470 32-80 (105)
93 PRK08651 succinyl-diaminopimel 30.0 1.1E+02 0.0023 35.2 6.5 56 306-366 338-393 (394)
94 PRK07033 hypothetical protein; 29.2 1E+03 0.022 28.2 16.2 54 180-234 345-400 (427)
95 PF10337 DUF2422: Protein of u 27.9 1E+03 0.022 28.3 14.4 32 585-616 187-218 (459)
96 PRK07522 acetylornithine deace 27.0 1.6E+02 0.0036 33.5 7.3 74 276-364 311-384 (385)
97 PF12911 OppC_N: N-terminal TM 26.1 74 0.0016 26.1 3.1 36 651-686 8-43 (56)
98 PF07466 DUF1517: Protein of u 26.1 9.7E+02 0.021 26.9 17.6 46 205-250 241-286 (289)
99 PF09971 DUF2206: Predicted me 25.9 1.1E+03 0.024 27.5 13.6 23 638-660 123-145 (367)
100 PF06781 UPF0233: Uncharacteri 24.9 88 0.0019 28.9 3.6 11 59-69 46-56 (87)
101 KOG3533 Inositol 1,4,5-trispho 24.2 2E+03 0.044 30.0 18.7 47 444-493 2261-2307(2706)
102 PF05656 DUF805: Protein of un 23.9 5.8E+02 0.013 24.0 9.4 11 572-582 65-75 (120)
103 PRK08596 acetylornithine deace 22.4 1.6E+02 0.0035 34.3 6.2 56 306-366 363-418 (421)
104 PF05421 DUF751: Protein of un 22.3 3.1E+02 0.0067 23.7 6.1 30 636-665 12-41 (61)
105 PRK07338 hypothetical protein; 22.1 1.4E+02 0.003 34.4 5.5 56 305-366 344-400 (402)
106 PRK10726 hypothetical protein; 20.6 7.5E+02 0.016 23.6 10.3 32 444-489 31-62 (105)
107 TIGR01880 Ac-peptdase-euk N-ac 20.1 1.8E+02 0.0038 33.6 5.8 56 306-365 343-399 (400)
No 1
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=4.9e-135 Score=1190.22 Aligned_cols=796 Identities=31% Similarity=0.528 Sum_probs=675.6
Q ss_pred CCCcCcchhhHHHHHHHHHHHHHHHHHhhheeeccccCCCCCccccc--CCCCCCHHHHHHHHHHHHcCCCCCCCCHHHH
Q 002429 33 NDSIHVSSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQA--GRRGFSELEAMKHVKALTQLGPHAVGSDALD 110 (923)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~~ll~~~~~~~v~~~~~~~lP~~~~~~~~--~~~~fs~erA~~~L~~L~~igpr~~GS~~n~ 110 (923)
.|+..+.++||..+.++..+..++... +..+.++++|.|++..++ .+++|+++||++++++++++|||++||.+|+
T Consensus 3 ~~~~~~~~~~r~~~~~~~~~~f~~~~~--~~~~~~~~~~~pl~~~~e~~~~~~f~~~rA~~~l~~ls~~G~~~~gS~~ne 80 (834)
T KOG2194|consen 3 LDKSFRRKRKRNGAPCLAHLIFLLSIA--IVLYLFDHLPEPLTQPQEQTLPSQFSEARALKDLLSLSAAGPHPVGSDNNE 80 (834)
T ss_pred chhHhhhhhhhccchHHHHHHHHHHHH--HHHHHHhhccccCCCcchhcCchhhHHHHHHHHHHHHHhcCCcccCchhhH
Confidence 344455566666666665555444433 233556667776655444 4689999999999999999999999999997
Q ss_pred -HHHHHHHHHHHhcccccCCc-ceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEEeec
Q 002429 111 -RALQYVLAASQKIKESKHWE-ADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHI 188 (923)
Q Consensus 111 -~a~~yL~~~l~~i~~~~~~~-~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~ 188 (923)
.+++||++|++++++++..+ +++|+|.+..+ |.. ..++++++|++++||++|+.+|. ++++.++|++||+
T Consensus 81 ~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~s-g~~-----~~~~~~~~Y~~i~NIvVki~~k~--~~~~~~lLlnaHf 152 (834)
T KOG2194|consen 81 MHASSFILKEVNKIRKGSQSDLYDMEVDLQSAS-GSF-----ILEGMTLVYQNISNIVVKISPKN--GNDKNALLLNAHF 152 (834)
T ss_pred HHHHHHHHHHHHHHHhhhhcchhhheeceeecc-cee-----eehhhhheeeeeeeEEEecCCCC--CCccceeeeeccc
Confidence 99999999999999876653 56777765421 110 12578999999999999999973 3445699999999
Q ss_pred cccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCCCCc
Q 002429 189 DTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS 268 (923)
Q Consensus 189 DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG~~ 268 (923)
||||++|||+||++|||+|||++|++++.....+|+|+|+||++||.+++|||+|++||||+++|+++||||++|+||++
T Consensus 153 DSvpt~~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLea~GsGGre 232 (834)
T KOG2194|consen 153 DSVPTGPGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLEAAGSGGRE 232 (834)
T ss_pred cccCCCCCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEeccccCcccce
Confidence 99999999999999999999999999998777899999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHH
Q 002429 269 ALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGS 348 (923)
Q Consensus 269 ~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~s 348 (923)
++||+||++|+++.|.++++||+++++++|+||+|+|||||||++|++|+|+||+|+|+..|++.|||++|.++++.+++
T Consensus 233 iLFQagp~~wl~k~Y~~~~phPf~stlgee~Fq~g~IpSdTDfrif~eyg~l~GLD~A~~~Ng~vYHTk~D~~~~i~~gs 312 (834)
T KOG2194|consen 233 ILFQAGPNHWLLKAYLQAAPHPFASTLGEELFQSGIIPSDTDFRIFREYGHLPGLDMAFVKNGYVYHTKYDGIQYIPPGS 312 (834)
T ss_pred eEEecCCchHHHHHHHhhCCCchhhhhHHHhhhcCcCccccchHHHHHhCCcccceeeeeeccceEEeecccccccCcch
Confidence 99999996699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCeEEecccCceEEEEechhHHHHHHHHHHHHHHHHHHHhhcchh
Q 002429 349 LQHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGY 428 (923)
Q Consensus 349 lq~~g~~vl~lv~~la~a~~l~~~~~~~~~~~~~~~~~VyFD~lG~~~v~y~~~~~~~l~~~v~~~~l~~~~~~~~~~~~ 428 (923)
+||+|+|++++++.++|+ ++.+ .++.+++ +||||++|++|+.|+++++++||+.++ +.++ +...+.+.
T Consensus 313 ~q~tGen~L~~v~~lan~-el~~------~~~~~~g-~vyfdv~g~~~~~y~~~~~~iLNi~i~---~~i~-l~~~~~g~ 380 (834)
T KOG2194|consen 313 LQHTGENILALVRSLANS-ELDN------STERSKG-TVYFDVVGKYFLAYSESTGVILNITIC---ISIW-LMSLRSGS 380 (834)
T ss_pred hhhhhhHHHHHHHHHhch-hhcc------ccccCCC-ceehhhhhhhhheeehhhhhhhhhhhh---hhhh-hhhhcccc
Confidence 999999999999999998 5432 3455666 999999999999999999999993322 2222 33344343
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcceecchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 002429 429 PAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYS 508 (923)
Q Consensus 429 ~~~~~~~~~~~~~~l~~~~~~~~~~~vA~~~~~~~~~~~sw~s~~~l~~gLy~~p~~~g~~~~~~~~~~~~~~~~~~~~~ 508 (923)
..++++.++++.+++++++++++++++|++++.++ .+|+||++||+++|||.||+++|+.+++.++....++
T Consensus 381 ~~~~~f~~~~~~~i~s~~~~~~l~~~~a~~l~~v~-l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~y~~~~~~------- 452 (834)
T KOG2194|consen 381 SQLGKFILACLLQILSIVVAIGLPVLVALFLDWVG-LPLSWFSNPWLLLGLYYLPSLFGLAILQALYAKRSKR------- 452 (834)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHhhccc-ccceeecchHHHHHHHHhHHHHHhhHHHHHHHhhccc-------
Confidence 35889999999999999999999999999999984 6999999999999999999999999999874321111
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHhcccccCCCchHHHHH
Q 002429 509 KGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATL 588 (923)
Q Consensus 509 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~t~~~i~S~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (923)
++ +...+.+++.+|+ +|++|++++|++||||+|++++|+++++++ ++++....+|.++..|..++
T Consensus 453 ~~----------~~~~~~~ql~~h~---~l~~l~~~~t~y~I~S~y~~~~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~ 517 (834)
T KOG2194|consen 453 HS----------LEYLQHDQLLLHS---LLSILLIIMTYYGIRSAYLPLLLLLFYVIS--YLLNTLTILHLCGTLYLITL 517 (834)
T ss_pred cc----------cchhhHHHHHHHH---HHHHHHHHheecccchhHHHHHHHHHHHHH--HHHhhceeeccCCceeeeee
Confidence 01 1123456777776 788888999999999999999999999999 55778888999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHH
Q 002429 589 LLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGAKGPIAFASFIL 668 (923)
Q Consensus 589 ~~~~~~P~~~~~~l~~~~~~~~~p~~gR~g~~~~~nPd~~~D~iIa~l~a~~t~l~~~~l~Pli~~~~~~~~i~~~l~~~ 668 (923)
++||+.|+.+.+|.+++++.+|+|||||+|.+. ||| .+||.++++++.+.++|++|++|+||+++.|+.+++.+
T Consensus 518 ~i~~~~p~~~~ay~~~~~~~~fipm~Gr~g~~~--nPd----~~i~~~~~~~~~l~~~f~i~l~~~fr~~~~i~~~l~~I 591 (834)
T KOG2194|consen 518 LICQVGPFLFAAYSTYSLVRTFIPMMGRFGNAS--NPD----LSISFLNAFGANLIVGFLIPLVHLFRRSKSIILGLFGI 591 (834)
T ss_pred eeeehHhHHHHHHHHHHHHHeeeccccccCCCC--Cch----HHHHHHHHHHHHhhHHHHHHHHHHHcCCchhHHHHHHH
Confidence 999999999999999999999999999999754 885 99999999999999999999999999999999999888
Q ss_pred HHHHHHHHhcCCCCCCCcCC-cceeEEEEEEeccCCCCCC---cCCcccccccccCC--------CCChhH---HHhccc
Q 002429 669 VGLSIIMVSSGIIPPFSEET-ARAVNIVHIVDASGKFGGK---QEPSSYIALYSATP--------GKLTKE---VEQIKE 733 (923)
Q Consensus 669 ~~~~~~~~~~~~~~Pf~~~~-~~r~~v~H~~r~~~~~~~~---~d~~~~~~~~~~~~--------~~l~~~---~~~C~~ 733 (923)
+.+++.+++|.++|||++++ ++|++++|++|++|+.++. +|+++++...|... .+++++ ..+|+.
T Consensus 592 ~~~~~~i~~T~~~fPy~~~~~~~r~~~lH~~rtf~~~~~~~~~~ds~~~i~~~D~r~~~~~~~~~~~~~~~~~~~~~~~~ 671 (834)
T KOG2194|consen 592 TAVILIIASTSIGFPYRPKTTVQRVPVLHVRRTFYDRDGTSSQNDSGYFINSQDRRGAEVLPFTKSNLTDLSSVQADCDD 671 (834)
T ss_pred HHHHHHHHhcCCcCCccccccceeEEEEecccceecccCceeecccceeeeecccccccCCcchhhcccccccccccccc
Confidence 88888888999999999775 6799999999999977743 56666666554332 122222 256999
Q ss_pred CccCCCCcccccccccccccceeccCCCCccCCCC-------CCeeEeecccccccCCCCcceEEEEEEecCCCcEEEEE
Q 002429 734 GFVCGRDNVIDFVTSSMKYGCLTDDNSEGGWSQSD-------IPTIHVNSDTVDTEGNENERITQVSIDMKGAKRLTLAI 806 (923)
Q Consensus 734 el~CG~p~~~~~~~~~~y~~~~~~~~~~~~Wlp~~-------~p~l~l~s~~~~~~~~~~~r~~r~~f~l~gp~h~sl~I 806 (923)
+++||+| +|+ |.+.+.+++|+|++ +|++.+++|+. ++++ ..|++|+++|+|||++||
T Consensus 672 ~~~c~~p---------~y~--w~~~~~~~~~vp~~~~v~~~~~~~l~l~sk~~----~~~~-~~r~~~~i~~~d~~s~~i 735 (834)
T KOG2194|consen 672 EMMCGMP---------VYN--WIKPREQSLWVPNPEPVIGPYPPNLKLLSKTS----LDNG-NLRYEFSITGTDHISLFI 735 (834)
T ss_pred cccCCce---------eee--ccccCccceEecCCccccCCCCceEEEeeccc----cCCC-ceEEEEEEeccCceEEEE
Confidence 9999996 875 99999999999995 36899999965 4433 578999999999999999
Q ss_pred ece---eecCcccccCCcccccCCCCCCCCccEEEEEEeC-CCCceEEEEEEEeccccccccCCCCCCCCCCCeEEEe--
Q 002429 807 NAK---EIEDFTFKVDSEELVPRDAKSSIYGWHIIEFSGG-KNAASKFEIALYWAKNSTRAAGNSNGKEKQQPLVKLR-- 880 (923)
Q Consensus 807 ~p~---~l~~WSf~~~~~~~~p~~~~~~~~~~y~i~~s~G-~~~P~~F~lel~~~~~~~~~~~~~~~~~~~~p~~~l~-- 880 (923)
+|. ++++||| .++ |..+ +.+ +|+||++|| ++.|++||+|+++. ++ .+++| +|++
T Consensus 736 ~p~~d~~~~~wsf--~~~---~~~~--~~~-~~~i~~~yg~~~~p~~F~lel~~~----------~~-~~~v~-~k~~~~ 795 (834)
T KOG2194|consen 736 SPLNDVKVLDWSF--TTS---PLTE--NKT-PYHIYFSYGLDSTPLNFWLELEKE----------EG-VTDVP-FKLGVS 795 (834)
T ss_pred EecCCceEEEEec--cCC---cccc--cCC-ceEEEEEeecCCCCceEEEEEeec----------cC-ccCCc-eEEeee
Confidence 995 9999999 443 2322 223 499999999 56999999999997 34 67888 8888
Q ss_pred ----cCCCCCCHHHHHHHhcCCCCcccccccCCCccccc
Q 002429 881 ----TDFDRLTPKTERVLSKLPPWCSLFEGSISSQPLSF 915 (923)
Q Consensus 881 ----~~~~~~t~~~~~fl~~fP~wa~~~~~~~~~~~~~~ 915 (923)
+|.+++||++++|+++|||||+.+++|+|+.+..|
T Consensus 796 ~h~~~~~~~~t~~~~~~~~~lP~~~~~~~~~~~~~~~~~ 834 (834)
T KOG2194|consen 796 AHYIHDLELITPEYKEFLETLPSWAATVDWSTSYESWIF 834 (834)
T ss_pred eeeccchhhcCHHHHHHHHhCCchhhccccccchhheeC
Confidence 57889999999999999999999999999987654
No 2
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.95 E-value=1.1e-26 Score=257.52 Aligned_cols=260 Identities=19% Similarity=0.259 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHc-CCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccc-ccccccc
Q 002429 86 ELEAMKHVKALTQ-LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT-LIYSDLN 163 (923)
Q Consensus 86 ~erA~~~L~~L~~-igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~-~~Y~~~~ 163 (923)
.+-|.+++++|+. +++|.+||+++.++++||.++|+++|. +++.+.|..... .... .+.. .....+.
T Consensus 30 ~~~a~~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~------~v~~q~f~~~~~-~~~~----~g~~~~~~~~g~ 98 (346)
T PRK10199 30 GDFANTQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGY------QSDIRTFNSRYI-YTAR----DNRKNWHNVTGS 98 (346)
T ss_pred cchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCC------ceEeeeccccce-eecc----cccccccCCccc
Confidence 3456778888876 899999999999999999999999983 444443331100 0000 0000 0011468
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeeccccC--------------CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 002429 164 HIVLRILPKYASEAGENAILVSSHIDTVS--------------AGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (923)
Q Consensus 164 NVi~~i~g~~~~~~~~~~vll~aH~DSv~--------------~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf 229 (923)
|||++++|+ .++.|+++||+|||+ ..|||.||++|||+|||++|.|++. +++++|+|++
T Consensus 99 nVIa~~~G~-----~~~~Ill~AH~DTV~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~ 171 (346)
T PRK10199 99 TVIAAHEGK-----APQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVA 171 (346)
T ss_pred eEEEEECCC-----CCCeEEEEEEcCcCCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEE
Confidence 999999874 347899999999995 2479999999999999999999864 4788999999
Q ss_pred eCCCCCCCcChHHHHhcCCC--cCCceEEEEeecCcCCCCcceeecCCC-HHHH-----HHHHHHhcCCCCcccc-----
Q 002429 230 NTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPN-LWAV-----ENFAAVAKYPSGQIIG----- 296 (923)
Q Consensus 230 ~~~EE~gl~GS~~f~~~h~~--~~~v~a~iNlD~~G~gG~~~lfq~g~~-~~li-----~~y~~~a~~p~~~~l~----- 296 (923)
+++||.|+.||+.|+++++. .+++.++||+|+++.+ ...++..|.+ ...+ +...+.+ ...|..+.
T Consensus 172 ~~~EE~Gl~GS~~~~~~~~~~~~~~~~~~iNlD~~~~~-d~~~~~~g~~~~~~~~~~~~d~~~~~a-~~~g~~~~~~~~~ 249 (346)
T PRK10199 172 TSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVG-DKLYFNSGVNTPEAVRKLTRDRALAIA-RRHGIAATTNPGL 249 (346)
T ss_pred ECCcccCcHHHHHHHHhcCccchhcEEEEEEeccCCCC-CceEEecCCCcHHHHhHHHHHHHHHHH-HHcCCccccCCCc
Confidence 99999999999999976543 4689999999999875 4445555542 2111 1112222 12222221
Q ss_pred cccccCCCCCCCCchHHhhhcCCCeEEEEeec-------------------CCCCCCC-CcCCCcCCCCH-------HHH
Q 002429 297 QDLFASGVFETATDFQVYTEVAGLSGLDFAYT-------------------DKSAVYH-TKNDRLDLLKP-------GSL 349 (923)
Q Consensus 297 ~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~-------------------~~~~~YH-T~~Dt~d~i~~-------~sl 349 (923)
+..|..| ....|||.+|.+ .|||.+.+... ..+..|| |.+|+.++++. ..+
T Consensus 250 ~~~~p~g-~~~rSDH~~F~~-~GIP~l~~~a~n~~~g~~d~~~q~~~~~~~~~g~~~h~~~~d~~~~l~~~~pgri~~~~ 327 (346)
T PRK10199 250 NKNYPKG-TGCCNDAEVFDK-AGIPVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRC 327 (346)
T ss_pred cccccCC-CcCCcccHHHHh-cCCCeEEeeccccccCCcccceecccCccCCCCccccCcCcchHHHHHHhcchHHHHHH
Confidence 2223334 346899999999 99999987421 2366789 89999999986 355
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 002429 350 QHLGENMLDFLLQTASST 367 (923)
Q Consensus 350 q~~g~~vl~lv~~la~a~ 367 (923)
....+.++.++.+||++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~ 345 (346)
T PRK10199 328 RDVVRIMLPLVKELAKAS 345 (346)
T ss_pred HhHHHHHHHHHHHHhccC
Confidence 667788999999999763
No 3
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=99.95 E-value=1.9e-28 Score=249.64 Aligned_cols=170 Identities=31% Similarity=0.488 Sum_probs=132.0
Q ss_pred CeEEEEeeccccC------CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhc-CCCcCC
Q 002429 180 NAILVSSHIDTVS------AGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ-HPWSTT 252 (923)
Q Consensus 180 ~~vll~aH~DSv~------~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~-h~~~~~ 252 (923)
++|+++|||||++ .++||+||++|||+|||+||.|++.+.+++++|+|+|+++||.|+.||++|+++ +.+.++
T Consensus 1 e~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~~~~~~ 80 (179)
T PF04389_consen 1 EYIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDHEELDN 80 (179)
T ss_dssp EEEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHHCHHHH
T ss_pred CEEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhhccccc
Confidence 4799999999998 899999999999999999999999777889999999999999999999999963 345688
Q ss_pred ceEEEEeecCcCCCCcceeecCC-CHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecC-C
Q 002429 253 IRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD-K 330 (923)
Q Consensus 253 v~a~iNlD~~G~gG~~~lfq~g~-~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~-~ 330 (923)
+.++||+|++|.+++....+..+ .++.++.+.+...++.......+.+.....+..+||.+|.. .|||++.+.... .
T Consensus 81 ~~~~inlD~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sD~~~F~~-~gip~~~~~~~~~~ 159 (179)
T PF04389_consen 81 IAAVINLDMIGSGDPTVYSEGSPSLPSRLEAYLSSFKQPYGSSLGPDVPPEKPTFGGSDHYPFSK-AGIPAVTLSSTDGY 159 (179)
T ss_dssp EEEEEEECSSBSSSSEEEEEEGGGHHHHHHHHHHHHHHHHHCHTSSECEEEESSTTSSTCHHHHT-TT-EEEEEEESSSS
T ss_pred ceeEEeccccccCcccceeeeeccccchhhhhhhhhhhhhhcccccccccccCCCCCCCcHhhhc-CCEeEEEEEecCCC
Confidence 99999999999998888877655 23434444333333333333333332234556899999997 999999999888 7
Q ss_pred CCCCCCcCCCcCCCCHHHHH
Q 002429 331 SAVYHTKNDRLDLLKPGSLQ 350 (923)
Q Consensus 331 ~~~YHT~~Dt~d~i~~~slq 350 (923)
.+.|||+.||++++++++||
T Consensus 160 ~~~~Ht~~Dt~~~~~~~~l~ 179 (179)
T PF04389_consen 160 NPYYHTPEDTPDNLDPDTLQ 179 (179)
T ss_dssp GTTTTSTT-SGGGC-HHHH-
T ss_pred CCCCCCcccChhhcCCccCC
Confidence 78899999999999999987
No 4
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=99.87 E-value=1.2e-21 Score=233.69 Aligned_cols=204 Identities=19% Similarity=0.273 Sum_probs=159.5
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCC
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEE 235 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~---~~~~p~~~I~flf~~~EE~ 235 (923)
-..++||+++|+|. +++|++|++++|.|||. .||.|+++|++.|+|++|.+.. .|++|+|+|+|++|+|||.
T Consensus 335 ~~ki~NIig~I~Gs---~epD~~ViigahrDSw~--~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeEf 409 (702)
T KOG2195|consen 335 ETKIQNIIGKIEGS---EEPDRYVIIGAHRDSWT--FGAIDPNSGTALLLEIARALSKLKKRGWRPRRTILFASWDAEEF 409 (702)
T ss_pred eeeeeeEEEEEecC---cCCCeEEEEeccccccc--cCCcCCCccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchhc
Confidence 34789999999996 58999999999999996 7899999999999999999864 6899999999999999999
Q ss_pred CCcChHHHHhcCCC--cCCceEEEEeecCcCCCCcceeecCCCHHHHHHHHHH---hcCCCCcccccccccCCCCCCCCc
Q 002429 236 GLNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAV---AKYPSGQIIGQDLFASGVFETATD 310 (923)
Q Consensus 236 gl~GS~~f~~~h~~--~~~v~a~iNlD~~G~gG~~~lfq~g~~~~li~~y~~~---a~~p~~~~l~~e~f~~g~ips~TD 310 (923)
|+.||..|+++|.. ..+..++||+|+++.++...-.++ +|.+.+...++ .+.|........+ .....+||
T Consensus 410 GliGStE~~E~~~~~L~~~av~yin~d~~~~~~~~l~~~~--~PlL~~li~~~~k~~~~p~~~~~~~~v---~~~g~~Sd 484 (702)
T KOG2195|consen 410 GLLGSTEWAEEYLKNLKSRAVVYINVDNAVLGDYTLHVKT--TPLLTDLIEEAAKSVLSPDKGDQSNRV---LSLGGGSD 484 (702)
T ss_pred cccccHHHHHHHHHHhhheeEEEEeccccccCCceeEEec--CccHHHHHHHHHhccCCCCccccceeE---eccCCCCc
Confidence 99999999998854 467899999999998865544443 44444444333 3455433221111 12368999
Q ss_pred hHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCC----CHH--HHHHHHHHHHHHHHHHhcCCCCCCC
Q 002429 311 FQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLL----KPG--SLQHLGENMLDFLLQTASSTSIPKG 372 (923)
Q Consensus 311 ~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i----~~~--slq~~g~~vl~lv~~la~a~~l~~~ 372 (923)
|..|..+.|||+++++|....+.|||.+||++.+ |+. .+..++.+....+..+++++.+|.+
T Consensus 485 ~~~F~~~~GIpsv~~~f~~~yP~yhs~~dt~~~~~k~~D~~~~~~~~~a~~~~~~~l~l~~d~llPfd 552 (702)
T KOG2195|consen 485 YASFLQFAGIPSVDFAFNRTYPFYHSTYDTYEWLDKLLDPKFKQHLAAAGVLGLELLILADDPLLPFD 552 (702)
T ss_pred chhhccccCcceeeeeecCCcceeecccCcHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCccccCc
Confidence 9999999999999999999999999999995544 333 4445556666677777776666654
No 5
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=2e-18 Score=181.39 Aligned_cols=249 Identities=18% Similarity=0.259 Sum_probs=186.3
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
+.-+-.|.++.|..+. -||.+||+++.++++||.+.++.++ ..+|.|.|.... . ..+.+
T Consensus 46 ~~s~~~~~~~~L~p~l--v~Rvpgs~g~~~vr~~i~~~l~~l~------w~ve~~~f~~~t--------p-----~g~~~ 104 (338)
T KOG3946|consen 46 PDSDWNRLWENLLPIL--VPRVPGSPGSRQVRRFIIQHLRNLG------WAVETDAFTDNT--------P-----LGTRN 104 (338)
T ss_pred CCCCHHHHHHhhhhhh--ccccCCCCccHHHHHHHHHHHHhcC------ceeeeccccccC--------c-----ceeee
Confidence 3456778888877775 4899999999999999999999996 788888876431 0 12347
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCCC----CCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEEeCCC
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG----EGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLFNTGE 233 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s----pGA~Dd~sgva~mLE~ar~L~~~----~~~p~~~I~flf~~~E 233 (923)
..|||+++.+. ..+++++.|||||.-.. .||.|.+..||.||+++|.|.+. ...++-++.++|++||
T Consensus 105 f~nii~tl~~~-----A~r~lVlachydsk~~p~~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGE 179 (338)
T KOG3946|consen 105 FNNLIATLDPN-----ASRYLVLACHYDSKIFPGGMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGE 179 (338)
T ss_pred eeeEEEecCCC-----cchheeeecccccccCCCcceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccH
Confidence 89999999763 56889999999997432 68999999999999999999763 2346678999999999
Q ss_pred C--------CCCcChHHHHhcC------C-----CcCCceEEEEeecCcCCCCcc--eeecCCCHHHHHH--HH----H-
Q 002429 234 E--------EGLNGAHSFVTQH------P-----WSTTIRVAVDLEAMGIGGRSA--LFQAGPNLWAVEN--FA----A- 285 (923)
Q Consensus 234 E--------~gl~GS~~f~~~h------~-----~~~~v~a~iNlD~~G~gG~~~--lfq~g~~~~li~~--y~----~- 285 (923)
| ..+.||++.+++. + ..+++..++-+|-.|+.+++. .|.. ++.|..+. .. +
T Consensus 180 EAf~eW~p~DSlYGsRhLA~~~~sw~~~~~r~~~~ld~idl~vLldllga~~p~f~~~~~~-t~~wF~Rl~~iE~~l~~~ 258 (338)
T KOG3946|consen 180 EAFEEWGPEDSLYGSRHLAAKWESWPHSGIRGDLLLDGIDLLVLLDLLGAPNPTFYNFFPN-TDRWFHRLQSIEGELALL 258 (338)
T ss_pred HHHhhcCCccccchHHHHHHHHhccCCCCCccccccccchHhhhHHHhcCCChhHhhcCcc-hHHHHHHHHHHHHHHHHH
Confidence 9 3678999999762 1 124677888889999887764 2221 23443221 11 1
Q ss_pred --HhcCCCCcccccccccCCCCC--CCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 002429 286 --VAKYPSGQIIGQDLFASGVFE--TATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (923)
Q Consensus 286 --~a~~p~~~~l~~e~f~~g~ip--s~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~ 361 (923)
...|+.. ...|+.|... -+.||.+|.+ .|+|.+.+.......+|||+.|+..++|..+..+.+..+--++.
T Consensus 259 g~l~s~r~~----~~~Fq~~~~~~~veDDHiPFlr-rgVPVLHlI~~pFPsvWHt~dD~e~nldy~tt~~~~lilr~Fv~ 333 (338)
T KOG3946|consen 259 GLLASHRLP----PRYFQPGGLSSVVEDDHIPFLR-RGVPVLHLIPVPFPSVWHTPDDNERNLDYATTDNLALIIRVFVA 333 (338)
T ss_pred HHHHhccCC----chhccccCccccccCCcchhhh-cCCceEEecCCCCcccccCccchhhcCCchhHHHHHHHHHHHHH
Confidence 1123311 1234444321 3799999998 99999999999999999999999999999999998877766654
Q ss_pred H
Q 002429 362 Q 362 (923)
Q Consensus 362 ~ 362 (923)
+
T Consensus 334 e 334 (338)
T KOG3946|consen 334 E 334 (338)
T ss_pred H
Confidence 4
No 6
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=99.67 E-value=2.5e-16 Score=182.38 Aligned_cols=173 Identities=28% Similarity=0.348 Sum_probs=126.4
Q ss_pred CCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCC--CcCCce
Q 002429 177 AGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP--WSTTIR 254 (923)
Q Consensus 177 ~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~--~~~~v~ 254 (923)
..++.+++++|+|+++.++||.||++|+|++||++|.|+.. +|+++|+|+++++||.|+.||+.|+.++. ..+++.
T Consensus 206 ~~~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~--~p~~~v~f~~~~aEE~Gl~GS~~~~~~~~~~~~~~~~ 283 (435)
T COG2234 206 HSDSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGN--PPKRTVRFVAFGAEESGLLGSEAYVKRLSKDLDKKIA 283 (435)
T ss_pred CCCceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcC--CCCceEEEEEecchhhcccccHHHHhcCCcchhhhhh
Confidence 46789999999999999999999999999999999999985 49999999999999999999999996655 256788
Q ss_pred EEEEeecCcCCCCcceeecC---CC--HHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecC
Q 002429 255 VAVDLEAMGIGGRSALFQAG---PN--LWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD 329 (923)
Q Consensus 255 a~iNlD~~G~gG~~~lfq~g---~~--~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~ 329 (923)
+++|+||.|..++...++.. .+ ........+...++... .+. ......+||.+|.+ +|+|++.++...
T Consensus 284 ~viN~Dm~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~sd~~~f~~-~gi~~~~~~~~~ 356 (435)
T COG2234 284 LVINLDMLGSPNPTPTLILYGNGLERVPPGLRAVAALIGRPVDP-----STV-QDFDPRSDHYPFTE-AGIPSLFLFSGA 356 (435)
T ss_pred eEEecccccCCCCCcceEEeccCCccccchHHHHHHHHHhhccc-----ccc-CCCCCCCcchhhhh-cCCcceeeeecC
Confidence 89999999997633223321 11 11111111111111111 111 12345799999998 999999887543
Q ss_pred CC-----CCCCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 002429 330 KS-----AVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (923)
Q Consensus 330 ~~-----~~YHT~~Dt~d~i~~~slq~~g~~vl~lv 360 (923)
.. ..+||..|| ++ +..+++..+..+-...
T Consensus 357 ~~~~~~~~~~~t~~d~-~~-d~~~~~~~~~~~~~~~ 390 (435)
T COG2234 357 PGGVEAVAWGHTAADT-DK-DLSTLDQHGDAVAATL 390 (435)
T ss_pred Cccccccccccccccc-cc-chhhhcccchhhhhhh
Confidence 33 579999999 88 8888887775444433
No 7
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.47 E-value=3.5e-13 Score=155.32 Aligned_cols=127 Identities=20% Similarity=0.141 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccc
Q 002429 87 LEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (923)
Q Consensus 87 erA~~~L~~L~~igp-------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y 159 (923)
.|.+++|.+|.+||. |...|++..++++|+.++++++| +++.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~G------l~v~~D----------------------- 53 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESG------LETRFD----------------------- 53 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcC------CEEEEc-----------------------
Confidence 488999999998853 56678999999999999999998 345544
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC---
Q 002429 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG--- 236 (923)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~g--- 236 (923)
...||+++++|. +++.++|++++|+||||. .|..|+..||++.||++|.|.+.+.+|+++|.++++.+||.+
T Consensus 54 -~~gN~~~~~~g~---~~~~~~i~~gsHlDtv~~-gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~ 128 (406)
T TIGR03176 54 -DVGNLYGRLVGT---EFPEETILTGSHIDTVVN-GGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFP 128 (406)
T ss_pred -CCCcEEEEecCC---CCCCCeEEEeccccCCCC-CCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCC
Confidence 457999999985 346689999999999995 689999999999999999999998899999999999999976
Q ss_pred --CcChHHHHhcC
Q 002429 237 --LNGAHSFVTQH 247 (923)
Q Consensus 237 --l~GS~~f~~~h 247 (923)
+.||+++..+.
T Consensus 129 ~~~~Gs~~~~g~~ 141 (406)
T TIGR03176 129 YVFWGSKNIFGLA 141 (406)
T ss_pred cccccHHHHhCCC
Confidence 99999998543
No 8
>PRK09133 hypothetical protein; Provisional
Probab=99.43 E-value=2e-12 Score=151.77 Aligned_cols=150 Identities=18% Similarity=0.217 Sum_probs=116.5
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEE-EEeeeccCCCcccccccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVE-VDFFHAKSGANRVGTGVFKGKTLIYS 160 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve-~d~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (923)
++++.+++.+.|++|.+|.. +.+..++.++.+||.++|+++|. +++ ++.+.. ..
T Consensus 32 ~~~~~~~~~~~l~~Lv~i~S-~s~~~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~------------------~~ 86 (472)
T PRK09133 32 PTADQQAARDLYKELIEINT-TASTGSTTPAAEAMAARLKAAGF------ADADIEVTGP------------------YP 86 (472)
T ss_pred cchhHHHHHHHHHHHhccCC-CCCCcchHHHHHHHHHHHHHcCC------CceEEEeccC------------------CC
Confidence 56888999999999999832 33234456899999999999983 221 121110 11
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~~~~~~ 220 (923)
+..||+++++|+ .+.+.|++++|+|+||. ++|+.||++|+|++|++++.|.+.+..
T Consensus 87 ~~~nli~~~~g~----~~~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~ 162 (472)
T PRK09133 87 RKGNLVARLRGT----DPKKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFK 162 (472)
T ss_pred CceeEEEEecCC----CCCCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCC
Confidence 457999999774 23367999999999984 489999999999999999999987778
Q ss_pred CCCcEEEEEeCCCC-CCCcChHHHHhcCCCcCCceEEEEeec
Q 002429 221 FKNAVIFLFNTGEE-EGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 221 p~~~I~flf~~~EE-~gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
++++|+|+|..+|| .|..|++.++++++...+..++|+ |.
T Consensus 163 ~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~~~~i~-e~ 203 (472)
T PRK09133 163 PKRDIILALTGDEEGTPMNGVAWLAENHRDLIDAEFALN-EG 203 (472)
T ss_pred CCCCEEEEEECccccCccchHHHHHHHHhhccCeEEEEE-CC
Confidence 89999999999999 889999999977654334567788 64
No 9
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=99.42 E-value=2e-12 Score=149.09 Aligned_cols=128 Identities=18% Similarity=0.187 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHHHcCC------CCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccc
Q 002429 85 SELEAMKHVKALTQLG------PHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (923)
Q Consensus 85 s~erA~~~L~~L~~ig------pr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~ 158 (923)
+.+++++++.++.+|+ .|+..|+++.++++||.++|+++| ++++.+
T Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G------~~~~~~---------------------- 58 (414)
T PRK12890 7 NGERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAG------LEVRRD---------------------- 58 (414)
T ss_pred CHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCC------CEEEEc----------------------
Confidence 4679999999999875 356778888899999999999998 333321
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC---
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE--- 235 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~--- 235 (923)
...|++++++|+ ..+.+.|++++|+|+||. .|+.|+++|+|++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 59 --~~~nlia~~~g~---~~~~~~l~~~~H~DtVp~-~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~ 132 (414)
T PRK12890 59 --AAGNLFGRLPGR---DPDLPPLMTGSHLDTVPN-GGRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRF 132 (414)
T ss_pred --CCCcEEEEeCCC---CCCCCEEEEeCcccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeccccccc
Confidence 235999999774 234578999999999995 57899999999999999999988878899999999999997
Q ss_pred --CCcChHHHHhc
Q 002429 236 --GLNGAHSFVTQ 246 (923)
Q Consensus 236 --gl~GS~~f~~~ 246 (923)
++.||+.+...
T Consensus 133 ~~~~~G~~~~~~~ 145 (414)
T PRK12890 133 GPSMIGSRALAGT 145 (414)
T ss_pred CCccccHHHHHcc
Confidence 67899888743
No 10
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=99.40 E-value=3e-12 Score=147.90 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=107.4
Q ss_pred CCCHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccc
Q 002429 83 GFSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGK 155 (923)
Q Consensus 83 ~fs~erA~~~L~~L~~igp-------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~ 155 (923)
.++.+|.++++..|.+||. |...|.++.++++||.++|++.| ++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G------~~v~~~------------------- 60 (414)
T PRK12891 6 RVDGERLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAG------CTVRVD------------------- 60 (414)
T ss_pred ccCHHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCC------CEEEEC-------------------
Confidence 3466799999999999852 66778888899999999999998 344432
Q ss_pred cccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC
Q 002429 156 TLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE 235 (923)
Q Consensus 156 ~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~ 235 (923)
...||+++++|. +...+.|++++|+||||. .|..|++.|++++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 61 -----~~gNl~a~~~g~---~~~~~~l~~~~H~DtVp~-gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~ 131 (414)
T PRK12891 61 -----AMGNLFARRAGR---DPDAAPVMTGSHADSQPT-GGRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEG 131 (414)
T ss_pred -----CCCCEEEEecCC---CCCCCeEEEEecccCCCC-CccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccc
Confidence 235999999874 234578999999999995 47789999999999999999998888999999999999997
Q ss_pred C-----CcChHHHH
Q 002429 236 G-----LNGAHSFV 244 (923)
Q Consensus 236 g-----l~GS~~f~ 244 (923)
+ +.||+.+.
T Consensus 132 ~~f~~~~~Gs~~~~ 145 (414)
T PRK12891 132 SRFAPSMVGSGVFF 145 (414)
T ss_pred CcCCcccccHHHHh
Confidence 5 57998875
No 11
>PRK08262 hypothetical protein; Provisional
Probab=99.40 E-value=3.8e-12 Score=149.90 Aligned_cols=170 Identities=15% Similarity=0.188 Sum_probs=122.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhheeeccccCCCCCcccccCCCCCCHHHHHHHHHHHHcCCCCCCCCHHH-------HHHHH
Q 002429 42 KRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDAL-------DRALQ 114 (923)
Q Consensus 42 ~~~~~~~l~~~ll~~~~~~~v~~~~~~~lP~~~~~~~~~~~~fs~erA~~~L~~L~~igpr~~GS~~n-------~~a~~ 114 (923)
+|+++.++++++++.+ +.++.++.|+.-.-.++ .-.+-.++.+++.+.|++|.+|.. +.+.+++ .+..+
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~L~~lv~i~S-~s~~~~~~~~~~~~~~~~~ 77 (486)
T PRK08262 2 RRILLGLLALLLLLAA-VLAVRTFRFKSRQIDVP--AVAPVAVDEDAAAERLSEAIRFRT-ISNRDRAEDDAAAFDALHA 77 (486)
T ss_pred cchHHHHHHHHHHHHH-hhhheeEEcccCCCCcc--ccCCCcCCHHHHHHHHHHhcccce-eccCCCCcccHHHHHHHHH
Confidence 6788888877666655 44566666654322221 222456789999999999999743 2332211 35788
Q ss_pred HHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC-
Q 002429 115 YVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA- 193 (923)
Q Consensus 115 yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~- 193 (923)
||.+++++++. .++.... +..|+++.++|+ ++..+.|++.+|+|+||.
T Consensus 78 ~L~~~~~~~g~------~~~~~~~----------------------~~~~vv~~~~g~---~~~~~~ill~gH~DvVp~~ 126 (486)
T PRK08262 78 HLEESYPAVHA------ALEREVV----------------------GGHSLLYTWKGS---DPSLKPIVLMAHQDVVPVA 126 (486)
T ss_pred HHHHhChhhhc------eeEEEEE----------------------CCccEEEEEECC---CCCCCeEEEECcccccCCC
Confidence 88888887762 2222110 225788888764 223378999999999974
Q ss_pred ----------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhc
Q 002429 194 ----------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (923)
Q Consensus 194 ----------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (923)
++|+.||++|++++|.+++.|.+.+..++++|+|+|..+||.|..|++.+++.
T Consensus 127 ~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~ 201 (486)
T PRK08262 127 PGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAEL 201 (486)
T ss_pred CCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHH
Confidence 36999999999999999999998877788999999999999998899988853
No 12
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=99.39 E-value=3.8e-12 Score=146.31 Aligned_cols=126 Identities=20% Similarity=0.163 Sum_probs=105.3
Q ss_pred HHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccc
Q 002429 88 EAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (923)
Q Consensus 88 rA~~~L~~L~~igp-------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (923)
|.+++|..+.+++. |..-|+++.++++||.++++++| ++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G------~~~~~~------------------------ 51 (401)
T TIGR01879 2 RLWETLMWLGEVGADPAGGMTRLALSPEDREAQDLFKKRMRAAG------LEVRFD------------------------ 51 (401)
T ss_pred hHHHHHHHHhcccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCC------CEEEEe------------------------
Confidence 67889999988754 34448888899999999999998 344432
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-----
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE----- 235 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~----- 235 (923)
+..||+++++|+ ..+.+.|++++|+||||. .|..|+..|++++|++++.|++.+.+++++|.|+++.+||.
T Consensus 52 ~~~nl~a~~~g~---~~~~~~l~~~~H~DtV~~-gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~ 127 (401)
T TIGR01879 52 EVGNLIGRKEGT---EPPLEVVLSGSHIDTVVN-GGNFDGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPY 127 (401)
T ss_pred cCCcEEEEecCC---CCCCCEEEEecccccCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCccc
Confidence 235999999874 234578999999999995 47889999999999999999998888999999999999997
Q ss_pred CCcChHHHHhcC
Q 002429 236 GLNGAHSFVTQH 247 (923)
Q Consensus 236 gl~GS~~f~~~h 247 (923)
++.||+.++.+.
T Consensus 128 ~~~Gs~~~~~~~ 139 (401)
T TIGR01879 128 GMWGSRNMVGLA 139 (401)
T ss_pred ccccHHHHhccc
Confidence 789999998544
No 13
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=99.38 E-value=6.4e-12 Score=144.96 Aligned_cols=130 Identities=20% Similarity=0.208 Sum_probs=107.4
Q ss_pred CCHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (923)
Q Consensus 84 fs~erA~~~L~~L~~igp-------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~ 156 (923)
.+.+++++++++|+++|+ |+..|.++.++++||.++|++++ ++++++
T Consensus 4 ~~~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g------~~~~~~-------------------- 57 (413)
T PRK09290 4 IDAERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAG------LTVRVD-------------------- 57 (413)
T ss_pred cCHHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcC------CEEEEc--------------------
Confidence 457899999999999955 55778888899999999999998 334331
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-
Q 002429 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (923)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~- 235 (923)
...||+++++|. ....+.|++++|+|+||. .|..|++.|+|+|+++++.|.+.+.+++++|+|+++.+||.
T Consensus 58 ----~~~nl~a~~~g~---~~~~~~l~l~gH~DtVp~-~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g 129 (413)
T PRK09290 58 ----AVGNLFGRLEGR---DPDAPAVLTGSHLDTVPN-GGRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGS 129 (413)
T ss_pred ----CCCcEEEEecCC---CCCCCEEEEecCccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccc
Confidence 235899999763 123468999999999995 46789999999999999999988878889999999999998
Q ss_pred ----CCcChHHHHhcC
Q 002429 236 ----GLNGAHSFVTQH 247 (923)
Q Consensus 236 ----gl~GS~~f~~~h 247 (923)
|+.|++.+++++
T Consensus 130 ~~g~~~~G~~~~~~~~ 145 (413)
T PRK09290 130 RFGPAMLGSRVFTGAL 145 (413)
T ss_pred cccCccccHHHHHccc
Confidence 578999988554
No 14
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=99.36 E-value=1.7e-11 Score=141.36 Aligned_cols=145 Identities=22% Similarity=0.294 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccc
Q 002429 85 SELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS-~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~ 163 (923)
..+++.+.|++|.+|. ...+. .++.++.+||.++|+++| ++++.+... .....
T Consensus 35 ~~~~~~~~l~~lv~i~-S~s~~~~~~~~~~~~l~~~L~~~G------~~v~~~~~~-------------------~~~~~ 88 (410)
T PRK06133 35 EQPAYLDTLKELVSIE-SGSGDAEGLKQVAALLAERLKALG------AKVERAPTP-------------------PSAGD 88 (410)
T ss_pred hHHHHHHHHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHhCC------CeEEEEccC-------------------CCCCC
Confidence 3457888999999983 33333 234589999999999998 334332110 00246
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeeccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002429 164 HIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (923)
Q Consensus 164 NVi~~i~g~~~~~~~~~~vll~aH~DSv~~-----------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~ 226 (923)
||+++++|+ +.+.|++++|+|+||. ++|+.|+++|++++|++++.|.+.+.+++.+|+
T Consensus 89 ~lia~~~g~-----~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~ 163 (410)
T PRK06133 89 MVVATFKGT-----GKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLT 163 (410)
T ss_pred eEEEEECCC-----CCceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 999999763 2367999999999984 479999999999999999999987767788999
Q ss_pred EEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
|+|..+||.|..|++.++++... +...++++|..
T Consensus 164 ~~~~~dEE~g~~G~~~~~~~~~~--~~d~~i~~ep~ 197 (410)
T PRK06133 164 VLFNPDEETGSPGSRELIAELAA--QHDVVFSCEPG 197 (410)
T ss_pred EEEECCcccCCccHHHHHHHHhc--cCCEEEEeCCC
Confidence 99999999999999999976432 45677887743
No 15
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.36 E-value=6e-12 Score=151.51 Aligned_cols=128 Identities=16% Similarity=0.130 Sum_probs=107.1
Q ss_pred CHHHHHHHHHHHHcCCC----------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccc
Q 002429 85 SELEAMKHVKALTQLGP----------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (923)
Q Consensus 85 s~erA~~~L~~L~~igp----------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~ 154 (923)
-.+|.+++|..|++|+. |...|++..++++|+.++++++|.+ ++++|
T Consensus 179 ~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~-----~v~~D------------------ 235 (591)
T PRK13590 179 LGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFD-----EVHID------------------ 235 (591)
T ss_pred HHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCC-----eeeEC------------------
Confidence 35799999999998753 2334888899999999999999820 34433
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 002429 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (923)
Q Consensus 155 ~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE 234 (923)
...||+++++|+ .+..++|++++|+|||+. .|..|+..||+++||++|.|.+.+.+++++|.|++|.+||
T Consensus 236 ------~~GNl~~~~~g~---~~~~~~v~~gsHlDTV~~-gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EE 305 (591)
T PRK13590 236 ------AVGNVVGRYKGS---TPQAKRLLTGSHYDTVRN-GGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEE 305 (591)
T ss_pred ------CCCCEEEEecCC---CCCCCeEEEecccccCCC-CCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCc
Confidence 458999999885 234578999999999985 5789999999999999999999888889999999999999
Q ss_pred C-----CCcChHHHHh
Q 002429 235 E-----GLNGAHSFVT 245 (923)
Q Consensus 235 ~-----gl~GS~~f~~ 245 (923)
. ++.||+.+..
T Consensus 306 g~rF~~~~~GS~~~~G 321 (591)
T PRK13590 306 GQRYKATFLGSGALIG 321 (591)
T ss_pred cccCCccccchHHHhC
Confidence 7 5899999874
No 16
>PRK08596 acetylornithine deacetylase; Validated
Probab=99.35 E-value=1.8e-11 Score=141.67 Aligned_cols=144 Identities=18% Similarity=0.214 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 87 LEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS-~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
+++.+.|++|.+|.. +.+. .++.++.+||.++|+++| ++++.+. . +.+..||
T Consensus 13 ~~~~~~l~~Lv~i~S-~s~~~~~e~~~a~~l~~~l~~~G------~~~~~~~--~------------------~~~~~nv 65 (421)
T PRK08596 13 DELLELLKTLVRFET-PAPPARNTNEAQEFIAEFLRKLG------FSVDKWD--V------------------YPNDPNV 65 (421)
T ss_pred HHHHHHHHHHhcCCC-CCCCchhHHHHHHHHHHHHHHCC------CeEEEEE--c------------------cCCCceE
Confidence 578899999998732 2222 244578999999999998 3343321 0 0134799
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
+++++|+. ....+.|++++|+|+||. ++|+.|+++|++++|.+++.|.+.+..++.+
T Consensus 66 ia~~~g~~--~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~ 143 (421)
T PRK08596 66 VGVKKGTE--SDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGD 143 (421)
T ss_pred EEEecCCC--CCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCc
Confidence 99998741 112357999999999874 3899999999999999999999887778899
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
|.|+|..+||.|..|++.++++.. ....+++.|..
T Consensus 144 v~~~~~~dEE~g~~G~~~~~~~~~---~~d~~i~~ep~ 178 (421)
T PRK08596 144 LIFQSVIGEEVGEAGTLQCCERGY---DADFAVVVDTS 178 (421)
T ss_pred EEEEEEeccccCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999999999996543 34677777753
No 17
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.35 E-value=6.3e-12 Score=151.26 Aligned_cols=127 Identities=16% Similarity=0.185 Sum_probs=111.3
Q ss_pred CHHHHHHHHHHHHcCC----------CCCCCCHHHHHHHHHHHHHHHhcccccCCcce-EEEEeeeccCCCccccccccc
Q 002429 85 SELEAMKHVKALTQLG----------PHAVGSDALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFK 153 (923)
Q Consensus 85 s~erA~~~L~~L~~ig----------pr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~-ve~d~~~~~~g~~~~~~~~~~ 153 (923)
..+|.+++|..|++|| .|...|++..++++|+.++++++| .+ +++|
T Consensus 179 ~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~G------l~~v~~D----------------- 235 (591)
T PRK13799 179 IGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAG------FDEVEID----------------- 235 (591)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcC------CCeEeEC-----------------
Confidence 5679999999999986 155668899999999999999998 34 5554
Q ss_pred cccccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 002429 154 GKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (923)
Q Consensus 154 ~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~E 233 (923)
...||+++++|+ +++.++|++++|+|||+ ..|.-|+..||+++||++|.|.+.+.+++++|.++.|.+|
T Consensus 236 -------~~gNv~~~~~g~---~~~~p~v~~gSHlDTV~-~gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~E 304 (591)
T PRK13799 236 -------AVGNVVGRYKAA---DDDAKTLITGSHYDTVR-NGGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEE 304 (591)
T ss_pred -------CCCCEEEEcCCC---CCCCCeEEEeccccccC-CCCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCC
Confidence 458999999885 34568999999999998 5789999999999999999999999999999999999999
Q ss_pred CC-----CCcChHHHHh
Q 002429 234 EE-----GLNGAHSFVT 245 (923)
Q Consensus 234 E~-----gl~GS~~f~~ 245 (923)
|. ++.||+.+..
T Consensus 305 Eg~rF~~~~~GS~~~~G 321 (591)
T PRK13799 305 EGQRFKATFLGSGALIG 321 (591)
T ss_pred CccCCCccccchHHHhC
Confidence 97 8899999974
No 18
>PRK07473 carboxypeptidase; Provisional
Probab=99.33 E-value=3.1e-11 Score=137.80 Aligned_cols=149 Identities=18% Similarity=0.198 Sum_probs=112.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCHHH-HHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGPHAVGSDAL-DRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (923)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~n-~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (923)
++.+++.+.|++|.+|.. +.+.+++ .++.+||.++|+++| ++++.. .... ...
T Consensus 8 ~~~~~~~~~l~~Lv~i~S-~s~~~~~~~~~~~~l~~~l~~~G------~~~~~~--~~~~-----------------~~~ 61 (376)
T PRK07473 8 FDSEAMLAGLRPWVECES-PTWDAAAVNRMLDLAARDMAIMG------ATIERI--PGRQ-----------------GFG 61 (376)
T ss_pred cCHHHHHHHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHcC------CeEEEe--cCCC-----------------CCC
Confidence 567899999999999843 3444333 578899999999998 334332 1100 012
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeeccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~-----------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
.|+++++++. ....+.|++++|+|+||. ++|+.|+++|+|+||.+++.|.+.+..++.+|
T Consensus 62 ~~~~~~~~~~---~~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v 138 (376)
T PRK07473 62 DCVRARFPHP---RQGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPI 138 (376)
T ss_pred CeEEEEeCCC---CCCCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCE
Confidence 5899988652 134578999999999952 48999999999999999999988766667789
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCc
Q 002429 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
.|+|..+||.|..|++.+++++.. ...++|..|..+
T Consensus 139 ~~~~~~dEE~g~~g~~~~~~~~~~--~~d~~iv~ep~~ 174 (376)
T PRK07473 139 TVLFTPDEEVGTPSTRDLIEAEAA--RNKYVLVPEPGR 174 (376)
T ss_pred EEEEeCCcccCCccHHHHHHHhhc--cCCEEEEeCCCC
Confidence 999999999999999999965433 346778887554
No 19
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=99.33 E-value=1.9e-11 Score=140.82 Aligned_cols=129 Identities=21% Similarity=0.254 Sum_probs=106.1
Q ss_pred CCHHHHHHHHHHHHcCCC------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGP------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (923)
Q Consensus 84 fs~erA~~~L~~L~~igp------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~ 157 (923)
.+.+|+++.|++|++++. |+..|+++.++++||.++|+++| ++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G------~~~~~~--------------------- 59 (412)
T PRK12892 7 IDGQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAG------LAVRID--------------------- 59 (412)
T ss_pred ccHHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcC------CEEEEc---------------------
Confidence 457799999999999864 35557777799999999999998 334331
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC--
Q 002429 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE-- 235 (923)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~-- 235 (923)
+..|++++++|+ .+.+.|++++|+|+||. .|-.|+..|+|++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 60 ---~~~nl~a~~~g~----~~~~~l~l~gH~DtVp~-~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~ 131 (412)
T PRK12892 60 ---GIGNVFGRLPGP----GPGPALLVGSHLDSQNL-GGRYDGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSR 131 (412)
T ss_pred ---CCCcEEEEecCC----CCCCeEEEEccccCCCC-CCcccchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCccccc
Confidence 235999999874 22378999999999995 36789999999999999999998888999999999999998
Q ss_pred ---CCcChHHHHhcC
Q 002429 236 ---GLNGAHSFVTQH 247 (923)
Q Consensus 236 ---gl~GS~~f~~~h 247 (923)
++.||+.++.++
T Consensus 132 ~~~~~~Gs~~~~~~~ 146 (412)
T PRK12892 132 FTPGFLGSRAYAGRL 146 (412)
T ss_pred ccCccccHHHHHcCC
Confidence 568999998543
No 20
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=99.32 E-value=1.9e-11 Score=140.86 Aligned_cols=130 Identities=19% Similarity=0.219 Sum_probs=106.0
Q ss_pred CCHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (923)
Q Consensus 84 fs~erA~~~L~~L~~igp-------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~ 156 (923)
.+.++++++|++|++|.. |..+|.++.++.+||.++|+++| ++++++
T Consensus 7 ~~~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G------~~~~~~-------------------- 60 (412)
T PRK12893 7 INGERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAG------LTVSVD-------------------- 60 (412)
T ss_pred cCHHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcC------CEEEEc--------------------
Confidence 356899999999999863 33457777899999999999998 333331
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC
Q 002429 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG 236 (923)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~g 236 (923)
+..|++++++|. .++.+.|++++|+|+||. .|..|++.|+|++|++++.|.+.+.+++++|+|+|+.+||.|
T Consensus 61 ----~~~n~~a~~~g~---~~~~~~l~l~~H~DtVp~-~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 132 (412)
T PRK12893 61 ----AIGNLFGRRAGT---DPDAPPVLIGSHLDTQPT-GGRFDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGA 132 (412)
T ss_pred ----CCCcEEEEeCCC---CCCCCEEEEEecccCCCC-CCcccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEcccccc
Confidence 234999999774 223578999999999994 577899999999999999999987788999999999999986
Q ss_pred -----CcChHHHHhcC
Q 002429 237 -----LNGAHSFVTQH 247 (923)
Q Consensus 237 -----l~GS~~f~~~h 247 (923)
+.|+..+..++
T Consensus 133 ~~~~~~~G~~~~~~~~ 148 (412)
T PRK12893 133 RFAPAMLGSGVFTGAL 148 (412)
T ss_pred ccccccccHHHHhCcC
Confidence 88999888543
No 21
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.31 E-value=2.7e-11 Score=137.85 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.|++|.++. -+. .++.++++||.++|+++|. +++.+... .+..|++
T Consensus 2 ~~~~~~l~~Lv~i~-s~s--~~e~~~~~~l~~~l~~~G~------~~~~~~~~--------------------~~~~~l~ 52 (377)
T PRK08588 2 EEKIQILADIVKIN-SVN--DNEIEVANYLQDLFAKHGI------ESKIVKVN--------------------DGRANLV 52 (377)
T ss_pred hHHHHHHHHHhcCC-CCC--CcHHHHHHHHHHHHHHCCC------ceEEEecC--------------------CCCceEE
Confidence 68899999999873 233 3456899999999999983 34332110 0347899
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++ |. .++.|++.+|+|+||. ++|+.|++.|+++||++++.|.+.+..++.+|
T Consensus 53 a~~-g~-----~~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i 126 (377)
T PRK08588 53 AEI-GS-----GSPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTI 126 (377)
T ss_pred EEe-CC-----CCceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcE
Confidence 998 32 1268999999999985 37899999999999999999998877788999
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeec
Q 002429 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
.|+|..+||.|..|++.++++ ...++...++..|.
T Consensus 127 ~l~~~~dEE~g~~G~~~~~~~-~~~~~~d~~i~~ep 161 (377)
T PRK08588 127 RLLATAGEEVGELGAKQLTEK-GYADDLDALIIGEP 161 (377)
T ss_pred EEEEEcccccCchhHHHHHhc-CccCCCCEEEEecC
Confidence 999999999999999999954 33345556666553
No 22
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=99.31 E-value=2.6e-11 Score=137.91 Aligned_cols=145 Identities=15% Similarity=0.190 Sum_probs=105.9
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEc
Q 002429 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (923)
Q Consensus 91 ~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~ 170 (923)
+.|++|.++......+.++.++++||.++|+++|. +++...... + . .....|+++.+.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~------~~~~~~~~~--~-----------~---~~~~~~~~~~~~ 59 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGF------STDVIEITD--D-----------R---LKVLGKVVVKEP 59 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCC------ceEEEecCc--h-----------h---cccccceEEecc
Confidence 45778887643222355667999999999999983 333321100 0 0 002246777776
Q ss_pred CCCCCCCCCCeEEEEeeccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 002429 171 PKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (923)
Q Consensus 171 g~~~~~~~~~~vll~aH~DSv~~s---------------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf 229 (923)
|+ .+.+.|++.+|+|+||.. +|+.|+++|+|++|++++.|.+.+.+++++|+|+|
T Consensus 60 g~----~~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 135 (375)
T TIGR01910 60 GN----GNEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQS 135 (375)
T ss_pred CC----CCCCEEEEecccccccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEE
Confidence 63 235789999999999863 69999999999999999999987777889999999
Q ss_pred eCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 230 NTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 230 ~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
+.+||.|..|++.++++ ...++...++..|..
T Consensus 136 ~~~EE~g~~G~~~~~~~-~~~~~~d~~i~~~~~ 167 (375)
T TIGR01910 136 VVDEESGEAGTLYLLQR-GYFKDADGVLIPEPS 167 (375)
T ss_pred EcCcccCchhHHHHHHc-CCCCCCCEEEECCCC
Confidence 99999999999999954 333345667777754
No 23
>PRK07906 hypothetical protein; Provisional
Probab=99.27 E-value=3.6e-11 Score=139.24 Aligned_cols=130 Identities=25% Similarity=0.359 Sum_probs=100.3
Q ss_pred HHHHHHHHcCCCCCCC---CHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 90 MKHVKALTQLGPHAVG---SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 90 ~~~L~~L~~igpr~~G---S~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
.+.|++|.+|.....+ .+++.++++||.++++++|. +++.+... .+..|++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~------~~~~~~~~--------------------~~~~nv~ 55 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGL------EPTYLESA--------------------PGRANVV 55 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCC------CeEEeecC--------------------CCceEEE
Confidence 4677888887432211 24567899999999999983 34332100 1357999
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~ 226 (923)
++++|+ ++..+.|++++|+|+||. ++|+.||+.|++++|++++.|++.+..++++|.
T Consensus 56 ~~~~g~---~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~ 132 (426)
T PRK07906 56 ARLPGA---DPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLV 132 (426)
T ss_pred EEEeCC---CCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEE
Confidence 999764 234568999999999985 389999999999999999999988878899999
Q ss_pred EEEeCCCCCCC-cChHHHHhcCC
Q 002429 227 FLFNTGEEEGL-NGAHSFVTQHP 248 (923)
Q Consensus 227 flf~~~EE~gl-~GS~~f~~~h~ 248 (923)
|+|+.+||.|. .|++.++++++
T Consensus 133 ~~~~~dEE~g~~~g~~~l~~~~~ 155 (426)
T PRK07906 133 FAFVADEEAGGTYGAHWLVDNHP 155 (426)
T ss_pred EEEecCcccchhhhHHHHHHHHH
Confidence 99999999864 69999986543
No 24
>PRK07338 hypothetical protein; Provisional
Probab=99.27 E-value=7.9e-11 Score=135.21 Aligned_cols=157 Identities=19% Similarity=0.234 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 86 ELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS-~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
.+++.+.|.+|.++.. ..+. ++..++.+||.++|+++|. ++++.... +. ... ...+....+....|
T Consensus 16 ~~~~~~~l~~lv~i~S-~s~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~---~~-~~~--~~~~~~~~~~~~~n 82 (402)
T PRK07338 16 QAPMLEQLIAWAAINS-GSRNLDGLARMAELLADAFAALPG------EIELIPLP---PV-EVI--DADGRTLEQAHGPA 82 (402)
T ss_pred HHHHHHHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHhCCC------cEEEecCC---cc-ccc--cccccccccCcCCe
Confidence 4678888999998732 2222 2345799999999999983 33322100 00 000 00001111224479
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~-----------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~f 227 (923)
|+++++|. .++.|++++|+|+||. ++|+.|+|+|++++|++++.|.+.+..++.+|.|
T Consensus 83 l~a~~~~~-----~~~~lll~gH~DvVp~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~ 157 (402)
T PRK07338 83 LHVSVRPE-----APRQVLLTGHMDTVFPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDV 157 (402)
T ss_pred EEEEECCC-----CCccEEEEeecCccCCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 99999653 2246999999999974 3799999999999999999998876677789999
Q ss_pred EEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 228 LFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 228 lf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
+|..+||.|..|++.+++++.. +..+.+.+|..
T Consensus 158 ~~~~dEE~g~~g~~~~~~~~~~--~~~~~i~~ep~ 190 (402)
T PRK07338 158 LINPDEEIGSPASAPLLAELAR--GKHAALTYEPA 190 (402)
T ss_pred EEECCcccCChhhHHHHHHHhc--cCcEEEEecCC
Confidence 9999999999999999876542 34566777753
No 25
>PRK09104 hypothetical protein; Validated
Probab=99.26 E-value=8.6e-11 Score=137.72 Aligned_cols=146 Identities=16% Similarity=0.179 Sum_probs=110.4
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCH----HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccc
Q 002429 85 SELEAMKHVKALTQLGPHAVGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~----~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (923)
..+++.+.|++|.+|.. ..+.+ +..++.+||.++|+++| +++++. .. .
T Consensus 15 ~~~~~~~~L~~lv~i~S-vs~~~~~~~~~~~~~~~l~~~l~~~G------~~v~~~--~~-------------------~ 66 (464)
T PRK09104 15 NLDASLERLFALLRIPS-ISTDPAYAADCRKAADWLVADLASLG------FEASVR--DT-------------------P 66 (464)
T ss_pred hHHHHHHHHHHHhcCCC-CCCCccchHHHHHHHHHHHHHHHHCC------CeEEEE--ec-------------------C
Confidence 35688999999998743 22222 23578999999999998 334332 10 0
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCC--------------------------CCCCCCChhHHHHHHHHHHHH
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------------GEGAGDCSSCVAVMLELARVM 214 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------------spGA~Dd~sgva~mLE~ar~L 214 (923)
+..||++++.|+ +...+.|++++|+|+||. ++|+.|||.|++++|++++.|
T Consensus 67 ~~~~l~a~~~g~---~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l 143 (464)
T PRK09104 67 GHPMVVAHHEGP---TGDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAW 143 (464)
T ss_pred CCCEEEEEecCC---CCCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHH
Confidence 236999999763 234678999999999863 268999999999999999999
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeec
Q 002429 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 215 ~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
.+.+..++.+|.|+|.++||.|..|...++.+.....+..++|+.|.
T Consensus 144 ~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~ 190 (464)
T PRK09104 144 KAVTGSLPVRVTILFEGEEESGSPSLVPFLEANAEELKADVALVCDT 190 (464)
T ss_pred HHhcCCCCCcEEEEEECccccCCccHHHHHHhhHHhcCCCEEEEeCC
Confidence 98766677899999999999999999999865432224577888883
No 26
>PRK07907 hypothetical protein; Provisional
Probab=99.26 E-value=9.8e-11 Score=136.67 Aligned_cols=143 Identities=18% Similarity=0.238 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCC----HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHAVGS----DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS----~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
.+++.+.|++|.+|.. +.+. .+..++++||.++|++++. .++++ +.. .+
T Consensus 17 ~~~~~~ll~~LV~ipS-~s~~~~~~~~~~~~~~~l~~~l~~~g~-----~~~~~--~~~-------------------~~ 69 (449)
T PRK07907 17 LPRVRADLEELVRIPS-VAADPFRREEVARSAEWVADLLREAGF-----DDVRV--VSA-------------------DG 69 (449)
T ss_pred HHHHHHHHHHHhcCCC-CCCCccchhhHHHHHHHHHHHHHHcCC-----ceEEE--Eec-------------------CC
Confidence 4688999999999743 2221 2235899999999999972 02222 110 13
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~ 220 (923)
..||+++++++ ...+.|++++|+|+||. ++|+.|+++|+|++|.+++.| . .+
T Consensus 70 ~~nl~a~~~~~----~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l-~--~~ 142 (449)
T PRK07907 70 APAVIGTRPAP----PGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL-G--GD 142 (449)
T ss_pred CCEEEEEecCC----CCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh-c--cC
Confidence 47999999763 24578999999999985 279999999999999999999 2 45
Q ss_pred CCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 221 FKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
++++|.|+++++||.|..|++.+++++....+..++|..|..
T Consensus 143 ~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~ 184 (449)
T PRK07907 143 LPVGVTVFVEGEEEMGSPSLERLLAEHPDLLAADVIVIADSG 184 (449)
T ss_pred CCCcEEEEEEcCcccCCccHHHHHHhchHhhcCCEEEEecCC
Confidence 678999999999999999999999765433345667776643
No 27
>PRK06446 hypothetical protein; Provisional
Probab=99.25 E-value=7.8e-11 Score=137.02 Aligned_cols=128 Identities=14% Similarity=0.228 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCHH-HHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDA-LDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~-n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
+++.+.|++|.+|.. +.+..+ ..++.+||.++|+++| ++++.. .. .+..||
T Consensus 2 ~~~~~~l~eLV~i~S-~s~~~~~~~~~a~~l~~~l~~~G------~~ve~~--~~-------------------~~~~~l 53 (436)
T PRK06446 2 DEELYTLIEFLKKPS-ISATGEGIEETANYLKDTMEKLG------IKANIE--RT-------------------KGHPVV 53 (436)
T ss_pred hhHHHHHHHHhCCCC-CCCCcHhHHHHHHHHHHHHHHCC------CeEEEE--ec-------------------CCCCEE
Confidence 477889999999743 222222 2689999999999998 344432 11 034789
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
++++.+ .+.+.|++++|+|+||. ++|+.|||+|+|++|.+++.|.+.+ .++.+
T Consensus 54 ia~~~~-----~~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~ 127 (436)
T PRK06446 54 YGEINV-----GAKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVN 127 (436)
T ss_pred EEEecC-----CCCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCC
Confidence 999853 13468999999999874 3899999999999999999987654 56789
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCC
Q 002429 225 VIFLFNTGEEEGLNGAHSFVTQHP 248 (923)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~ 248 (923)
|.|+|..+||.|..|++.++++++
T Consensus 128 i~~~~~~dEE~g~~g~~~~l~~~~ 151 (436)
T PRK06446 128 VKFLYEGEEEIGSPNLEDFIEKNK 151 (436)
T ss_pred EEEEEEcccccCCHhHHHHHHHHH
Confidence 999999999999999999997765
No 28
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=99.25 E-value=9.8e-11 Score=134.45 Aligned_cols=147 Identities=17% Similarity=0.233 Sum_probs=109.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 002429 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (923)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (923)
..-.+++.+.|++|.+|... .++.+..++.+||.++|++++. +++. +.. +...
T Consensus 5 ~~~~~~~~~~l~~lv~ipS~-~~~~~~~~~~~~l~~~l~~~G~------~~~~--~~~------------------~~g~ 57 (400)
T TIGR01880 5 KWEEDIAVTRFREYLRINTV-QPNPDYAACVDFLIKQADELGL------ARKT--IEF------------------VPGK 57 (400)
T ss_pred ccchHHHHHHHHHHhccCcc-CCCccHHHHHHHHHHHHHhCCC------ceeE--EEe------------------cCCc
Confidence 35567899999999998432 2333346899999999999983 3322 110 0034
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 002429 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (923)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p 221 (923)
.|++++++|+ +...+.|++++|+|+||. ++|+.|+++++|++|++++.|.+.+.++
T Consensus 58 ~~l~~~~~g~---~~~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~ 134 (400)
T TIGR01880 58 PVVVLTWPGS---NPELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKF 134 (400)
T ss_pred eeEEEEEecC---CCCCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCC
Confidence 6899999774 223478999999999984 2789999999999999999999887778
Q ss_pred CCcEEEEEeCCCCCCC-cChHHHHhcCCCcCCceEEEEee
Q 002429 222 KNAVIFLFNTGEEEGL-NGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 222 ~~~I~flf~~~EE~gl-~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
+++|.|+|..+||.|. .|++.++++ ...+.+++.+.+|
T Consensus 135 ~~~v~l~~~~dEE~g~~~G~~~~~~~-~~~~~~~~~~~~d 173 (400)
T TIGR01880 135 KRTIHISFVPDEEIGGHDGMEKFAKT-DEFKALNLGFALD 173 (400)
T ss_pred CceEEEEEeCCcccCcHhHHHHHHHh-hhccCCceEEEEc
Confidence 8999999999999875 699999854 2223345555554
No 29
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=99.24 E-value=1.7e-10 Score=132.01 Aligned_cols=149 Identities=18% Similarity=0.192 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHcCCCCCCCC---HHHHHHHHHHHHHHHhcccccCCcce-EEEEeeeccCCCcccccccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHAVGS---DALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS---~~n~~a~~yL~~~l~~i~~~~~~~~~-ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (923)
+++.+.|++|.+|..- .+. .++.++++||.++|+++|. + ++....... . ......
T Consensus 5 ~~~~~~l~~lv~i~s~-s~~~~~~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~~-----~---------~~~~~~ 63 (400)
T PRK13983 5 DEMIELLSELIAIPAV-NPDFGGEGEKEKAEYLESLLKEYGF------DEVERYDAPDP-----R---------VIEGVR 63 (400)
T ss_pred HHHHHHHHHHhCcCCC-CCCCCCccHHHHHHHHHHHHHHcCC------ceEEEEecCCc-----c---------cccCCC
Confidence 5788999999987432 221 2356889999999999983 2 322110000 0 000025
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 002429 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (923)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p 221 (923)
.|++++++|. .+.+.|++++|+|+||. ++|+.||+.|++++|++++.|.+.+.++
T Consensus 64 ~nl~~~~~g~----~~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~ 139 (400)
T PRK13983 64 PNIVAKIPGG----DGKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRP 139 (400)
T ss_pred ccEEEEecCC----CCCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCC
Confidence 8999999763 23458999999999985 3789999999999999999999887788
Q ss_pred CCcEEEEEeCCCCCCCc-ChHHHHhcCCC-cCCceEEEEee
Q 002429 222 KNAVIFLFNTGEEEGLN-GAHSFVTQHPW-STTIRVAVDLE 260 (923)
Q Consensus 222 ~~~I~flf~~~EE~gl~-GS~~f~~~h~~-~~~v~a~iNlD 260 (923)
+++|.|+|..+||.|.. |++.++++++. .....+++..|
T Consensus 140 ~~~v~~~~~~dEE~g~~~g~~~~~~~~~~~~~~~d~~i~~~ 180 (400)
T PRK13983 140 KYNLGLAFVSDEETGSKYGIQYLLKKHPELFKKDDLILVPD 180 (400)
T ss_pred CCcEEEEEEeccccCCcccHHHHHhhcccccCCCCEEEEec
Confidence 89999999999998884 89999866432 22344555544
No 30
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.23 E-value=1.8e-10 Score=133.32 Aligned_cols=152 Identities=17% Similarity=0.131 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 86 ELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS-~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
.+++.+.|++|.++.. .... .++.++.+||.++|+++|. +++..... +. . +. ..+.+..|
T Consensus 13 ~~~~~~~l~~Lv~i~S-~~~~g~~e~~~~~~l~~~l~~~G~------~~~~~~~~---~~---~-----~~-~~~~~~~n 73 (427)
T PRK13013 13 RDDLVALTQDLIRIPT-LNPPGRAYREICEFLAARLAPRGF------EVELIRAE---GA---P-----GD-SETYPRWN 73 (427)
T ss_pred HHHHHHHHHHHhcCCC-cCCCCccHHHHHHHHHHHHHHCCC------ceEEEecC---CC---C-----cc-cccCCcce
Confidence 3578888999998732 2211 2335899999999999983 34332110 00 0 00 01224579
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
++++++|+ .+++.|++++|+|+||. ++|+.|+++|++++|.+++.|++.+.+++.+|
T Consensus 74 lia~~~g~----~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v 149 (427)
T PRK13013 74 LVARRQGA----RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSI 149 (427)
T ss_pred EEEEecCC----CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccE
Confidence 99999764 23468999999999984 37999999999999999999998777778899
Q ss_pred EEEEeCCCCCCCc-ChHHHHhcCCCcC--CceEEEEeec
Q 002429 226 IFLFNTGEEEGLN-GAHSFVTQHPWST--TIRVAVDLEA 261 (923)
Q Consensus 226 ~flf~~~EE~gl~-GS~~f~~~h~~~~--~v~a~iNlD~ 261 (923)
+|+|..+||.|.. |.+.++ +....+ +..++|..|.
T Consensus 150 ~~~~~~dEE~g~~~g~~~l~-~~~~~~~~~~d~~i~~ep 187 (427)
T PRK13013 150 EISGTADEESGGFGGVAYLA-EQGRFSPDRVQHVIIPEP 187 (427)
T ss_pred EEEEEeccccCChhHHHHHH-hcCCccccCCCEEEEecC
Confidence 9999999998876 555555 333322 4566666663
No 31
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.23 E-value=9.9e-11 Score=130.71 Aligned_cols=145 Identities=16% Similarity=0.178 Sum_probs=106.9
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
.+...+++..+|.+-...+......++|+..+.+.++... ..++.. + ...+++.
T Consensus 26 ~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~---~~i~~~----------------------p-~~~~~l~ 79 (420)
T KOG2275|consen 26 ISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTV---QKIESE----------------------P-GKYVLLY 79 (420)
T ss_pred hHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCce---eEEEec----------------------C-ceeEEEE
Confidence 3445555555553322222222278999999999987421 111111 1 2467899
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002429 168 RILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~ 226 (923)
+|.|+ ++..+.|||++|.|+||+ ++||.|+++-++++||++|.|+.+|.+|+|+|.
T Consensus 80 T~~GS---~P~L~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~ 156 (420)
T KOG2275|consen 80 TWLGS---DPELPSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIH 156 (420)
T ss_pred EeeCC---CCCccceeeeccccccCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEE
Confidence 99996 567899999999999985 489999999999999999999999999999999
Q ss_pred EEEeCCCCCC-CcChHHHHhcCCCcCCceEEEEeecC
Q 002429 227 FLFNTGEEEG-LNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 227 flf~~~EE~g-l~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
+.|..+||.| ..|++.|+. +...++....+.+|=-
T Consensus 157 lsfvpDEEi~G~~Gm~~fa~-~~~~~~l~~~filDEG 192 (420)
T KOG2275|consen 157 LSFVPDEEIGGHIGMKEFAK-TEEFKKLNLGFILDEG 192 (420)
T ss_pred EEecCchhccCcchHHHHhh-hhhhcccceeEEecCC
Confidence 9999999976 789999994 4444555555666533
No 32
>PRK08201 hypothetical protein; Provisional
Probab=99.23 E-value=1.5e-10 Score=135.42 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCC---HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHAVGS---DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS---~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (923)
.+++.+.|++|.+|.....++ .++.++++||.++|++++.+ .++++. . .+.
T Consensus 13 ~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~-----~~~~~~--~-------------------~~~ 66 (456)
T PRK08201 13 REAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLE-----HVEIME--T-------------------AGH 66 (456)
T ss_pred HHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCC-----eEEEEe--c-------------------CCC
Confidence 467889999999874322111 23457899999999999831 133321 0 023
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 002429 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (923)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p 221 (923)
.||++++.|. .+.+.|++++|+|+||. ++|+.|+|.|+|++|++++.|.+.+..+
T Consensus 67 ~~l~a~~~~~----~~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~ 142 (456)
T PRK08201 67 PIVYADWLHA----PGKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTL 142 (456)
T ss_pred CEEEEEecCC----CCCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCC
Confidence 5899988653 24578999999999874 3899999999999999999998765566
Q ss_pred CCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 222 KNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 222 ~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
+++|.|++..+||.|..|+..+++++...-+..++|+.|..
T Consensus 143 ~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~ii~e~~ 183 (456)
T PRK08201 143 PVNVKFCIEGEEEIGSPNLDSFVEEEKDKLAADVVLISDTT 183 (456)
T ss_pred CCCEEEEEEcccccCCccHHHHHHhhHHhccCCEEEEeCCC
Confidence 78999999999999999999998765322123566776644
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=99.20 E-value=2e-10 Score=129.53 Aligned_cols=133 Identities=22% Similarity=0.235 Sum_probs=102.4
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
.++++.+.|++|.+|.. + |..+.++++|+.++|+++|. +++.+ +..|
T Consensus 4 ~~~~~~~~l~~Lv~i~s-~--s~~e~~~~~~l~~~l~~~G~------~~~~~------------------------~~~n 50 (348)
T PRK04443 4 SALEARELLKGLVEIPS-P--SGEEAAAAEFLVEFMESHGR------EAWVD------------------------EAGN 50 (348)
T ss_pred chHHHHHHHHHHHcCCC-C--CCChHHHHHHHHHHHHHcCC------EEEEc------------------------CCCc
Confidence 45789999999999733 2 33456899999999999983 33321 2358
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~ 232 (923)
+++++.+ ..+.|++++|+|+||. ++|+.|+|+|+|++|++++.| + .+++++|.|++..+
T Consensus 51 ~i~~~~~------~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~--~~~~~~i~~~~~~d 121 (348)
T PRK04443 51 ARGPAGD------GPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL-E--ALVRARVSFVGAVE 121 (348)
T ss_pred EEEEcCC------CCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh-c--ccCCCCEEEEEEcc
Confidence 8988732 2368999999999974 489999999999999999999 3 46788999999999
Q ss_pred CCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 233 EEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 233 EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
||.|..|...+..+.. ...++|+.|..
T Consensus 122 EE~g~~~~~~~l~~~~---~~d~~iv~Ept 148 (348)
T PRK04443 122 EEAPSSGGARLVADRE---RPDAVIIGEPS 148 (348)
T ss_pred cccCChhHHHHHHhcc---CCCEEEEeCCC
Confidence 9999887776664432 35667777743
No 34
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.19 E-value=1.9e-10 Score=135.37 Aligned_cols=137 Identities=17% Similarity=0.306 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+|+++.|++|+++ +++ |.++.++++||.++++++| ++++.+ ...|+
T Consensus 3 ~~~~~~~l~~l~~i-~s~--s~~e~~~~~~l~~~l~~~G------~~~~~~------------------------~~~n~ 49 (477)
T TIGR01893 3 PSRVFKYFEEISKI-PRP--SKNEKEVSNFIVNWAKKLG------LEVKQD------------------------EVGNV 49 (477)
T ss_pred HHHHHHHHHHHHcC-CCC--CccHHHHHHHHHHHHHHcC------CeEEEe------------------------CCCeE
Confidence 46899999999998 454 5556789999999999998 344432 23699
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCCC------------------------CCCC---CChhHHHHHHHHHHHHHhcC
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVMSQWA 218 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~s------------------------pGA~---Dd~sgva~mLE~ar~L~~~~ 218 (923)
+++++|+. +....+.|++++|+|+||.. +|+. |++.|++++|++++. .
T Consensus 50 ~~~~~~~~-g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~- 124 (477)
T TIGR01893 50 LIRKPATP-GYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---N- 124 (477)
T ss_pred EEEEcCCC-CCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---C-
Confidence 99998742 12345789999999999842 5664 999999999999875 2
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCc
Q 002429 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
..++++|.++|+.+||.|+.||+.+..+. .....++|.|..+
T Consensus 125 ~~~~~~i~~~~~~dEE~g~~Gs~~l~~~~---~~~~~~~~~d~~~ 166 (477)
T TIGR01893 125 NLKHPPLELLFTVDEETGMDGALGLDENW---LSGKILINIDSEE 166 (477)
T ss_pred CCCCCCEEEEEEeccccCchhhhhcChhh---cCCcEEEEecCCC
Confidence 33567999999999999999999997422 2346788888543
No 35
>PRK06837 acetylornithine deacetylase; Provisional
Probab=99.17 E-value=3.6e-10 Score=131.13 Aligned_cols=145 Identities=19% Similarity=0.136 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.|++|.+|. .-|.++.++++||.++|+++|. +++....... ......+ .......+.+..||
T Consensus 19 ~~~~~~~l~~li~ip---S~s~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~nl 86 (427)
T PRK06837 19 FDAQVAFTQDLVRFP---STRGAEAPCQDFLARAFRERGY------EVDRWSIDPD-DLKSHPG--AGPVEIDYSGAPNV 86 (427)
T ss_pred hHHHHHHHHHHhccC---CCCCcHHHHHHHHHHHHHHCCC------ceEEecCCHH-Hhhhccc--ccccccccCCCceE
Confidence 457788899998873 2344556899999999999983 3322110000 0000000 00001122357899
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
+++++|+ .++.+.|++++|+|+||. ++|+.|+++|++++|.+++.|.+.+..++++
T Consensus 87 ~a~~~g~---~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~ 163 (427)
T PRK06837 87 VGTYRPA---GKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAAR 163 (427)
T ss_pred EEEecCC---CCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999874 233578999999999986 3599999999999999999999887778999
Q ss_pred EEEEEeCCCCCCCcChHHHHh
Q 002429 225 VIFLFNTGEEEGLNGAHSFVT 245 (923)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~ 245 (923)
|.|+|+.+||.+..|+...+.
T Consensus 164 i~~~~~~dEE~~g~g~~~~~~ 184 (427)
T PRK06837 164 VHFQSVIEEESTGNGALSTLQ 184 (427)
T ss_pred EEEEEEeccccCCHhHHHHHh
Confidence 999999999988888877663
No 36
>PRK05469 peptidase T; Provisional
Probab=99.17 E-value=3.8e-10 Score=130.05 Aligned_cols=127 Identities=14% Similarity=0.203 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHcCCCCCCC------C-HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHAVG------S-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~G------S-~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y 159 (923)
+++.++|+++.+|...+.. | .+.+++++||.++|+++|.+ .++++
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~-----~~~~~----------------------- 53 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQ-----DVTLD----------------------- 53 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-----eEEEC-----------------------
Confidence 3678889999887432211 1 34578999999999999831 12221
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeeccccCC----------------------------------------------
Q 002429 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------------------------------- 193 (923)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------------------------------- 193 (923)
...||+++++|+ +.++.+.|++.+|+|+||.
T Consensus 54 -~~~~v~~~~~g~--~~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 130 (408)
T PRK05469 54 -ENGYVMATLPAN--VDKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLIT 130 (408)
T ss_pred -CCeEEEEEecCC--CCCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEE
Confidence 235899999774 1234589999999999964
Q ss_pred CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHh
Q 002429 194 GEGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVT 245 (923)
Q Consensus 194 spGA----~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~ 245 (923)
++|+ .|||+|+|+||.+++.|++.+..++.+|+|+|..+||.| .|++.++.
T Consensus 131 ~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g-~Ga~~~~~ 185 (408)
T PRK05469 131 TDGTTLLGADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIG-RGADKFDV 185 (408)
T ss_pred cCCCEeecccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccC-CCHHHhhh
Confidence 2365 999999999999999998876567789999999999998 89998863
No 37
>PRK07079 hypothetical protein; Provisional
Probab=99.17 E-value=3.4e-10 Score=132.89 Aligned_cols=148 Identities=14% Similarity=0.146 Sum_probs=104.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCH-HHHHHHHHHHH----HHHhcccccCCcceEEEEeeeccCCCcccccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGPHAVGSD-ALDRALQYVLA----ASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (923)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~-~n~~a~~yL~~----~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~ 158 (923)
++++++.+.|++|.+|.. +.+.+ ++..+++|+.+ +|+++| +++++ .... .
T Consensus 14 ~~~~~~~~~L~~LV~ipS-vs~~~~~~~~~~~~l~~~~~~~l~~~G------~~~~~--~~~~----------------~ 68 (469)
T PRK07079 14 FDSGAFFADLARRVAYRT-ESQNPDRAPALRAYLTDEIAPALAALG------FTCRI--VDNP----------------V 68 (469)
T ss_pred hccHHHHHHHHHHhccCC-CCCCcccHHHHHHHHHHHHHHHHHHCC------CeEEE--EecC----------------C
Confidence 445688999999999843 23222 23456666654 666665 33332 2110 0
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC----------------------CCCCCCChhHHHHHHHHHHHHHh
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA----------------------GEGAGDCSSCVAVMLELARVMSQ 216 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~----------------------spGA~Dd~sgva~mLE~ar~L~~ 216 (923)
..+..||++++.+. .+.+.|++++|+|+||. ++|+.|||+|++++|.+++.|.+
T Consensus 69 ~~~~~~vva~~~~~----~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~ 144 (469)
T PRK07079 69 AGGGPFLIAERIED----DALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLA 144 (469)
T ss_pred CCCCCEEEEEeCCC----CCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHH
Confidence 01457899988542 33578999999999973 38999999999999999999875
Q ss_pred c-CCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEee
Q 002429 217 W-AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 217 ~-~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
. +.+++++|+|++..+||.|..|++.++++++...+..++|+.|
T Consensus 145 ~~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~d~~iv~e 189 (469)
T PRK07079 145 ARGGRLGFNVKLLIEMGEEIGSPGLAEVCRQHREALAADVLIASD 189 (469)
T ss_pred hcCCCCCCCEEEEEECccccCCccHHHHHHHhHHhcCCCEEEEeC
Confidence 4 4678889999999999999999999998764322345566655
No 38
>PRK06915 acetylornithine deacetylase; Validated
Probab=99.16 E-value=5.3e-10 Score=129.28 Aligned_cols=156 Identities=24% Similarity=0.232 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.+++|.++ |- -|.++.++.+||.++|+++|- ++++........ .....+......+.+..||
T Consensus 16 ~~~~~~~l~~lv~i-ps--~s~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~nl 83 (422)
T PRK06915 16 EEEAVKLLKRLIQE-KS--VSGDESGAQAIVIEKLRELGL------DLDIWEPSFKKL---KDHPYFVSPRTSFSDSPNI 83 (422)
T ss_pred HHHHHHHHHHHHhC-CC--CCcchHHHHHHHHHHHHhcCC------eeEEeecchhhh---hcccccCCcccccCCCceE
Confidence 36788999999987 22 344567889999999999983 333221100000 0000000000112246899
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
+++++|. .+.+.|++++|+|+||. ++|+.|+++|+++||.+++.|++.+.+++.+
T Consensus 84 ia~~~g~----~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~ 159 (422)
T PRK06915 84 VATLKGS----GGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGD 159 (422)
T ss_pred EEEEcCC----CCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999774 23478999999999985 3899999999999999999999877778889
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEee
Q 002429 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
|.|+|..+||.|..|+...+.+. + +...++.-|
T Consensus 160 v~~~~~~dEE~g~~G~~~~~~~~-~--~~d~~i~~e 192 (422)
T PRK06915 160 VIFQSVIEEESGGAGTLAAILRG-Y--KADGAIIPE 192 (422)
T ss_pred EEEEEecccccCCcchHHHHhcC-c--CCCEEEECC
Confidence 99999999999888988877432 2 234445444
No 39
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=99.15 E-value=4e-10 Score=127.37 Aligned_cols=128 Identities=27% Similarity=0.306 Sum_probs=98.4
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
|.++.|++|.+|.. -|.++.++.+||.++|+++| ++++.+... + .+.+..|+++
T Consensus 1 ~~~~~~~~l~~i~s---~s~~e~~~~~~l~~~l~~~g------~~~~~~~~~---~--------------~~~~~~~~~~ 54 (361)
T TIGR01883 1 RLKKYFLELIQIDS---ESGKEKAILTYLKKQITKLG------IPVSLDEVP---A--------------EVSNDNNLIA 54 (361)
T ss_pred ChHHHHHHHeecCC---CCCcHHHHHHHHHHHHHHcC------CEEEEeccc---c--------------ccCCCceEEE
Confidence 45788899988732 33456789999999999998 333332110 0 0113579999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 002429 168 RILPKYASEAGENAILVSSHIDTVSA--------------GEGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~~--------------spGA----~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf 229 (923)
+++|+ .+.+.|++++|+|+||. ++|+ .|+++|+|+||++++.|.+.+ .++++|+|+|
T Consensus 55 ~~~g~----~~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~ 129 (361)
T TIGR01883 55 RLPGT----VKFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIF 129 (361)
T ss_pred EEeCC----CCCCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEE
Confidence 99774 23478999999999984 3677 899999999999999998865 5678999999
Q ss_pred eCCCCCCCcChHHHHhc
Q 002429 230 NTGEEEGLNGAHSFVTQ 246 (923)
Q Consensus 230 ~~~EE~gl~GS~~f~~~ 246 (923)
+.+||.|..|++.+..+
T Consensus 130 ~~~EE~g~~G~~~~~~~ 146 (361)
T TIGR01883 130 TVKEELGLIGMRLFDES 146 (361)
T ss_pred EcccccCchhHhHhChh
Confidence 99999999999998753
No 40
>PRK13381 peptidase T; Provisional
Probab=99.15 E-value=5.5e-10 Score=128.59 Aligned_cols=126 Identities=17% Similarity=0.284 Sum_probs=96.7
Q ss_pred HHHHHHHHHHcCCCCCC-------CCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccc
Q 002429 88 EAMKHVKALTQLGPHAV-------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~-------GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (923)
++.+.|.++.+|..... .+++++++++||.++|+++|.+ .++++
T Consensus 2 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~-----~~~~~------------------------ 52 (404)
T PRK13381 2 QLTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLE-----DIVID------------------------ 52 (404)
T ss_pred cHHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCC-----cEEEc------------------------
Confidence 35777888887743221 2345678999999999999831 11111
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCCC----------------------------------------------
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG---------------------------------------------- 194 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s---------------------------------------------- 194 (923)
+..||+++++|+ .+..+.|++++|+|+||..
T Consensus 53 ~~~nvi~~~~g~---~~~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 129 (404)
T PRK13381 53 EHAIVTAKLPGN---TPGAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFS 129 (404)
T ss_pred CCeEEEEEEecC---CCCCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeC
Confidence 335999999774 2233789999999999743
Q ss_pred CCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhc
Q 002429 195 EGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (923)
Q Consensus 195 pGA----~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (923)
+|+ .|+++|+|+||.+++.|.+.+ .++.+|.|+|..+||.|..|++.++.+
T Consensus 130 rG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~ 184 (404)
T PRK13381 130 DGTSVLGADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLA 184 (404)
T ss_pred CCccccccccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHh
Confidence 467 999999999999999998764 457799999999999999999999744
No 41
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.14 E-value=6.3e-10 Score=125.25 Aligned_cols=132 Identities=28% Similarity=0.311 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhc-ccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKI-KESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i-~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
+++.+.+++|.++ |-+ |.++.++.+||.++|+++ + +++ +. ...|+
T Consensus 7 ~~~~~~l~~li~i-ps~--s~~e~~~~~~l~~~l~~~~~------~~~--~~-----------------------~~~~~ 52 (352)
T PRK13007 7 ADLAELTAALVDI-PSV--SGDEKALADAVEAALRALPH------LEV--IR-----------------------HGNSV 52 (352)
T ss_pred HHHHHHHHHHhcC-CCC--CchHHHHHHHHHHHHHhCcC------ceE--Ee-----------------------cCCeE
Confidence 5789999999987 333 345568999999999986 4 222 11 12589
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~--------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~ 231 (923)
++++.+. . .+.|++++|+|+||. ++|+.|+++|+|++|.+++.|. .++++|.|+|.+
T Consensus 53 ~~~~~~~----~-~~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~ 123 (352)
T PRK13007 53 VARTDLG----R-PSRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYD 123 (352)
T ss_pred EEEccCC----C-CCeEEEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEe
Confidence 9998432 1 236999999999985 4899999999999999999993 367899999999
Q ss_pred CCCCCC--cChHHHHhcCCCcCCceEEEEeec
Q 002429 232 GEEEGL--NGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 232 ~EE~gl--~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
+||.|. .|+..++.+++...+...+++.|.
T Consensus 124 ~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep 155 (352)
T PRK13007 124 CEEVEAEANGLGRLAREHPEWLAGDFAILLEP 155 (352)
T ss_pred cccccCCcccHHHHHHhcccccCCCEEEEecC
Confidence 999864 588888866654455678888874
No 42
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.14 E-value=4.8e-09 Score=117.68 Aligned_cols=226 Identities=19% Similarity=0.255 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
++..+.|++|+.+ +-++|.+ +++++|+.++|+++.. +++.| +..||+
T Consensus 2 ~~~~~~LkeL~~~-~gpsG~E--~eVr~~~~~el~~~~~------ev~~D------------------------~lGnli 48 (355)
T COG1363 2 EELLELLKELLEA-PGPSGYE--EEVRDVLKEELEPLGD------EVEVD------------------------RLGNLI 48 (355)
T ss_pred hHHHHHHHHHHcC-CCCCCcH--HHHHHHHHHHHHHhCC------ceEEc------------------------CCCcEE
Confidence 3567889999985 4455543 4699999999999973 34333 567999
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC-----------------------------------------------------
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA----------------------------------------------------- 193 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~----------------------------------------------------- 193 (923)
++++|+ ...+.|++.||+|.+..
T Consensus 49 a~~~g~----~g~~~imi~AHmDEiG~mV~~I~~~G~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~ 124 (355)
T COG1363 49 AKKGGK----NGPPKVMIAAHMDEIGFMVKEIEDDGFLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKE 124 (355)
T ss_pred EEecCC----CCCccEEEEeecceeeeeEEEECCCceEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCc
Confidence 999873 23455999999999862
Q ss_pred ------------------------------CCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCC
Q 002429 194 ------------------------------GEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKN 223 (923)
Q Consensus 194 ------------------------------spG--------------------A~Dd~sgva~mLE~ar~L~~~~~~p~~ 223 (923)
.+| |-||..||++|||++|.| + +..++.
T Consensus 125 ~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~ 202 (355)
T COG1363 125 EAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFVVFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPA 202 (355)
T ss_pred cccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEEEEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCc
Confidence 012 889999999999999999 4 577899
Q ss_pred cEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCCCC--------------cceee-c-CC-CHHHHHHHHHH
Q 002429 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGR--------------SALFQ-A-GP-NLWAVENFAAV 286 (923)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG~--------------~~lfq-~-g~-~~~li~~y~~~ 286 (923)
+++|+|+.-||.|+.||+....+ -+-..+|.+|..+.+.. .+... . ++ ++.+.+...+.
T Consensus 203 ~vy~v~tvqEEVGlrGA~~~a~~----i~pd~aiavd~~~~~d~~~~~~~~~~lg~Gp~i~~~D~~~~~~~~l~~~L~~~ 278 (355)
T COG1363 203 DVYFVASVQEEVGLRGAKTSAFR----IKPDIAIAVDVTPAGDTPGVPKGDVKLGKGPVIRVKDASGIYHPKLRKFLLEL 278 (355)
T ss_pred eEEEEEecchhhccchhhccccc----cCCCEEEEEecccccCCCCCcccccccCCCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 99999999999999999987732 23456777777766433 22222 2 23 56666665554
Q ss_pred hcCCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 002429 287 AKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (923)
Q Consensus 287 a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~ 365 (923)
|+. .+-.+..++++. .+||-..+.. -.|+|...+..--. +-|++ .+.++.+.+.++.+.+.+++..+..
T Consensus 279 A~~-~~Ip~Q~~v~~~----ggTDA~a~~~~g~gvpta~Igip~r--y~Hs~---~e~~~~~D~~~~~~Ll~~~i~~~~~ 348 (355)
T COG1363 279 AEK-NNIPYQVDVSPG----GGTDAGAAHLTGGGVPTALIGIPTR--YIHSP---VEVAHLDDLEATVKLLVAYLESLDR 348 (355)
T ss_pred HHH-cCCCeEEEecCC----CCccHHHHHHcCCCCceEEEecccc--cccCc---ceeecHHHHHHHHHHHHHHHHhcch
Confidence 321 111111233321 4788888764 25799988764322 24774 4667788888888877777776653
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.13 E-value=5.8e-10 Score=130.88 Aligned_cols=127 Identities=15% Similarity=0.215 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHcCCCCCCC---------CHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHAVG---------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~G---------S~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~ 156 (923)
.+++.+.|++|.+|..-..+ -.++.++.+||.++++++|. +++.
T Consensus 13 ~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~------~~~~--------------------- 65 (466)
T PRK07318 13 KDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGF------KTKN--------------------- 65 (466)
T ss_pred HHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCC------EEEE---------------------
Confidence 35788899999988543222 12346899999999999872 2221
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 002429 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQW 217 (923)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~ 217 (923)
..|++++++.. ...+.|++++|+|+||. ++|+.||++|+++++.+++.|++.
T Consensus 66 -----~~n~~~~~~~~----~~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~ 136 (466)
T PRK07318 66 -----VDNYAGHIEYG----EGEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKEL 136 (466)
T ss_pred -----ecCccceEEEC----CCCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHc
Confidence 12455555431 23367999999999984 389999999999999999999988
Q ss_pred CCCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 002429 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (923)
Q Consensus 218 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (923)
+.+++++|.|+|+.+||.|..|++.++++++
T Consensus 137 g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~~ 167 (466)
T PRK07318 137 GLPLSKKVRFIVGTDEESGWKCMDYYFEHEE 167 (466)
T ss_pred CCCCCccEEEEEEcccccCchhHHHHHHhCC
Confidence 8778889999999999999999999997664
No 44
>PRK07522 acetylornithine deacetylase; Provisional
Probab=99.12 E-value=7.4e-10 Score=126.24 Aligned_cols=141 Identities=17% Similarity=0.218 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
.++.+.|++|.+|. .+.+. ++.++.+||.++|+++| ++++.. ... ..+..||+
T Consensus 4 ~~~~~~l~~lv~i~-S~s~~-~~~~~~~~l~~~l~~~G------~~~~~~--~~~-----------------~~~~~nv~ 56 (385)
T PRK07522 4 MSSLDILERLVAFD-TVSRD-SNLALIEWVRDYLAAHG------VESELI--PDP-----------------EGDKANLF 56 (385)
T ss_pred hhHHHHHHHHhCCC-CcCCC-ccHHHHHHHHHHHHHcC------CeEEEE--ecC-----------------CCCcccEE
Confidence 46789999999973 33332 22488999999999998 333322 110 01347899
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~ 226 (923)
+++.++ ..+.|++++|+|+||. ++|+.|+++++|++|++++.|.+. +++++|.
T Consensus 57 a~~~~~-----~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~ 129 (385)
T PRK07522 57 ATIGPA-----DRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLH 129 (385)
T ss_pred EEeCCC-----CCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEE
Confidence 998542 2468999999999973 389999999999999999999875 4678999
Q ss_pred EEEeCCCCCCCcChHHHHhcCCC-cCCceEEEEeec
Q 002429 227 FLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEA 261 (923)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~iNlD~ 261 (923)
|+|..+||.|..|++.++++... ..+...+|..|.
T Consensus 130 ~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~~ep 165 (385)
T PRK07522 130 LAFSYDEEVGCLGVPSMIARLPERGVKPAGCIVGEP 165 (385)
T ss_pred EEEEeccccCCccHHHHHHHhhhcCCCCCEEEEccC
Confidence 99999999988999999865322 122445555543
No 45
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=99.12 E-value=7.9e-10 Score=124.64 Aligned_cols=129 Identities=21% Similarity=0.207 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.|++|.+|.. .|.+++++++||.++|++++ ++++.+. ..|+
T Consensus 9 ~~~~~~~l~~lv~i~s---~s~~e~~~~~~l~~~l~~~g------~~~~~~~------------------------~~~~ 55 (346)
T PRK00466 9 KQKAKELLLDLLSIYT---PSGNETNATKFFEKISNELN------LKLEILP------------------------DSNS 55 (346)
T ss_pred HHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHHHHcC------CeEEEec------------------------CCCc
Confidence 3688999999999843 34455789999999999998 2333321 1244
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~E 233 (923)
++ .|+ +.|++++|+|+||. ++|+.|++.|+|++|++++.|.+.+ .++.|+|..+|
T Consensus 56 ~~--~g~-------~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dE 122 (346)
T PRK00466 56 FI--LGE-------GDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADE 122 (346)
T ss_pred Ee--cCC-------CeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCc
Confidence 32 231 35999999999985 3999999999999999999998754 35899999999
Q ss_pred CCCCcChHHHHhcCCCcCCceEEEEeecCc
Q 002429 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 234 E~gl~GS~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
|.|..|++.+++++. +...++..|..+
T Consensus 123 E~g~~G~~~l~~~~~---~~d~~i~~ep~~ 149 (346)
T PRK00466 123 ESTSIGAKELVSKGF---NFKHIIVGEPSN 149 (346)
T ss_pred ccCCccHHHHHhcCC---CCCEEEEcCCCC
Confidence 999899999996542 345666666443
No 46
>PRK08652 acetylornithine deacetylase; Provisional
Probab=99.12 E-value=6.6e-10 Score=124.65 Aligned_cols=130 Identities=25% Similarity=0.289 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
|++.+.+++|.++. -+ |.++.++.+||.++|+++| ++++.+. . .+..|++
T Consensus 2 ~~~~~~~~~lv~ip-s~--s~~e~~~~~~l~~~l~~~G------~~v~~~~--~-------------------~~~~~~~ 51 (347)
T PRK08652 2 ERAKELLKQLVKIP-SP--SGQEDEIALHIMEFLESLG------YDVHIES--D-------------------GEVINIV 51 (347)
T ss_pred hhHHHHHHHHhcCC-CC--CCchHHHHHHHHHHHHHcC------CEEEEEe--c-------------------CceeEEE
Confidence 68899999999873 23 3445789999999999998 3444321 0 0235666
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE 234 (923)
+ +. .+.|++++|+|+||. ++|+.|+++|+|+||++++.|.+. .++++|+|+|..+||
T Consensus 52 ~---~~------~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE 120 (347)
T PRK08652 52 V---NS------KAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEE 120 (347)
T ss_pred c---CC------CCEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcc
Confidence 5 21 257999999999985 489999999999999999999864 346799999999999
Q ss_pred CCCcChHHHHhcCCCcCCceEEEEeec
Q 002429 235 EGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 235 ~gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
.|..|++.+++++. ...+++.|.
T Consensus 121 ~g~~G~~~~~~~~~----~d~~i~~ep 143 (347)
T PRK08652 121 EGGRGSALFAERYR----PKMAIVLEP 143 (347)
T ss_pred cCChhHHHHHHhcC----CCEEEEecC
Confidence 98899999996542 146666664
No 47
>PRK07205 hypothetical protein; Provisional
Probab=99.12 E-value=9.4e-10 Score=128.28 Aligned_cols=127 Identities=18% Similarity=0.235 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCC--------HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccc
Q 002429 85 SELEAMKHVKALTQLGPHAVGS--------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS--------~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~ 156 (923)
+.+++.+.|++|.+|.. ..+. .+-.++.+|+.++++++| ++++++ .
T Consensus 9 ~~~~~~~~l~~lv~i~S-~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g------~~~~~~--~----------------- 62 (444)
T PRK07205 9 VQDACVAAIKTLVSYPS-VLNEGENGTPFGQAIQDVLEATLDLCQGLG------FKTYLD--P----------------- 62 (444)
T ss_pred hHHHHHHHHHHHccccc-ccCCCcCCCCCchhHHHHHHHHHHHHHhCC------CEEEEc--C-----------------
Confidence 45788899999998743 2221 122578899999999987 333332 1
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHH
Q 002429 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMS 215 (923)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~ 215 (923)
...|+++++ |. ..+.|++++|+|+||. ++|+.|+|.|+|++|++++.|.
T Consensus 63 ----~~~~~~~~~-g~-----~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~ 132 (444)
T PRK07205 63 ----KGYYGYAEI-GQ-----GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALL 132 (444)
T ss_pred ----CCeEEEEEe-cC-----CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHH
Confidence 112455554 32 2367999999999985 3899999999999999999999
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcChHHHHhcC
Q 002429 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH 247 (923)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h 247 (923)
+.+.+++++|.|+|.++||.|..|++.|+.+.
T Consensus 133 ~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~ 164 (444)
T PRK07205 133 DAGVQFNKRIRFIFGTDEETLWRCMNRYNEVE 164 (444)
T ss_pred HcCCCCCCcEEEEEECCcccCcccHHHHHhCC
Confidence 98878889999999999999999999998644
No 48
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.11 E-value=1.6e-09 Score=127.80 Aligned_cols=138 Identities=16% Similarity=0.269 Sum_probs=105.2
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (923)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~ 163 (923)
...+++++.|++|++| |++.+ .++++++||.++++++| ++++.| ...
T Consensus 7 ~~~~~~~~~l~~Lv~i-ps~S~--~e~~~~~~l~~~~~~~G------~~~~~d------------------------~~g 53 (485)
T PRK15026 7 LSPQPLWDIFAKICSI-PHPSY--HEEQLAEYIVGWAKEKG------FHVERD------------------------QVG 53 (485)
T ss_pred cCHHHHHHHHHHHhCC-CCCCC--CHHHHHHHHHHHHHhCC------CEEEEE------------------------ecC
Confidence 4567899999999997 55554 44589999999999998 344433 235
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeeccccCC------------------------CCCC---CCChhHHHHHHHHHHHHHh
Q 002429 164 HIVLRILPKYASEAGENAILVSSHIDTVSA------------------------GEGA---GDCSSCVAVMLELARVMSQ 216 (923)
Q Consensus 164 NVi~~i~g~~~~~~~~~~vll~aH~DSv~~------------------------spGA---~Dd~sgva~mLE~ar~L~~ 216 (923)
|+++++++.. +....+.|++.+|+|+|+. ++|+ .||++|+|++|.+++ +
T Consensus 54 nvi~~~~~~~-g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l~---~ 129 (485)
T PRK15026 54 NILIRKPATA-GMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLA---D 129 (485)
T ss_pred eEEEEEcCCC-CCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHHH---h
Confidence 8898876531 1134578999999999974 2777 499999999998763 3
Q ss_pred cCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 217 WAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 217 ~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
.+. ++.+|.++|+.+||.|+.||+.+.. . ..+.+++||+|..
T Consensus 130 ~~~-~~~~i~~l~t~dEE~G~~ga~~l~~--~-~~~~~~~i~~e~~ 171 (485)
T PRK15026 130 ENV-VHGPLEVLLTMTEEAGMDGAFGLQS--N-WLQADILINTDSE 171 (485)
T ss_pred CCC-CCCCEEEEEEcccccCcHhHHHhhh--c-cCCcCEEEEeCCC
Confidence 333 4678999999999999999999863 2 2467899999975
No 49
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=99.11 E-value=1.8e-09 Score=115.40 Aligned_cols=166 Identities=22% Similarity=0.332 Sum_probs=113.5
Q ss_pred CeEEEEeeccccC----CCCCCCCChhHHHHHHHHHHHHHhc---CCCCCCcEEEEEeCCCCCCCcChHHHHhcC-----
Q 002429 180 NAILVSSHIDTVS----AGEGAGDCSSCVAVMLELARVMSQW---AHEFKNAVIFLFNTGEEEGLNGAHSFVTQH----- 247 (923)
Q Consensus 180 ~~vll~aH~DSv~----~spGA~Dd~sgva~mLE~ar~L~~~---~~~p~~~I~flf~~~EE~gl~GS~~f~~~h----- 247 (923)
+.|++.|.+||.. .+|||.+..+|++++|++++.|.+. ....+++|+|+|++||..|..||+.|+.+.
T Consensus 1 ~iIlv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyDm~~~~f 80 (234)
T PF05450_consen 1 PIILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYDMQNGNF 80 (234)
T ss_pred CEEEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHHHHcCcC
Confidence 4799999999974 4799999999999999999999864 235789999999999999999999998532
Q ss_pred C--------C-cCCceEEEEeecCcCCCCcceeec--CC--C---HHHHHHHHHHhcCCCC--cccccccccCCCCCCCC
Q 002429 248 P--------W-STTIRVAVDLEAMGIGGRSALFQA--GP--N---LWAVENFAAVAKYPSG--QIIGQDLFASGVFETAT 309 (923)
Q Consensus 248 ~--------~-~~~v~a~iNlD~~G~gG~~~lfq~--g~--~---~~li~~y~~~a~~p~~--~~l~~e~f~~g~ips~T 309 (923)
+ . .++|..+|.++.+|......++.- ++ + ....+...+..+.+.. ....+..=....+|..+
T Consensus 81 ~~~~~~~~~i~~~~I~~~IElgqvg~~~~~~l~~Hvd~~~~~~~~~~~~~~l~~~~~s~~~~~~~~~~~~~~~~~LPPsS 160 (234)
T PF05450_consen 81 PSDSLQFQPISLDNIDSVIELGQVGLSNSSGLYAHVDSPSNSSVANQVDEALDAAAKSLASSNIVIKKASSSNPPLPPSS 160 (234)
T ss_pred cccccccccccHHHCCEEEEeeccCCCCCCCEEEEecCCccchhhHHHHHHHHHHHHhccccccceeccccCCCCCCcch
Confidence 2 1 148999999999998665323332 21 1 1233333332222221 11111111122355555
Q ss_pred chHHhhh-cCCCeEEEEeecCC---CCCCCCcCCCcCCCCH
Q 002429 310 DFQVYTE-VAGLSGLDFAYTDK---SAVYHTKNDRLDLLKP 346 (923)
Q Consensus 310 D~~~F~~-~~GiPgld~a~~~~---~~~YHT~~Dt~d~i~~ 346 (923)
...|.+ ..++||+-++-.+. ..+||+.+|+.++++.
T Consensus 161 -~~sFLr~~~~i~~vVLtd~~~~f~N~~y~S~~D~~~ni~~ 200 (234)
T PF05450_consen 161 -LQSFLRKDPNIPGVVLTDHDSQFTNKYYNSILDDAENINF 200 (234)
T ss_pred -HHHHHccCCCCCEEEecCCCcccccCCccCcccChhhhcC
Confidence 555554 34799998885544 3469999999998876
No 50
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=99.11 E-value=8.5e-10 Score=124.56 Aligned_cols=124 Identities=22% Similarity=0.302 Sum_probs=94.0
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcC
Q 002429 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (923)
Q Consensus 92 ~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g 171 (923)
.|++|.+|.. +.+. ++.++++||.++|+++| ++++.+... .+ .+..||++++.+
T Consensus 2 ~l~~lv~i~S-~s~~-~~~~~~~~l~~~l~~~G------~~~~~~~~~--~~----------------~~~~nl~~~~~~ 55 (364)
T TIGR01892 2 ILTKLVAFDS-TSFR-PNVDLIDWAQAYLEALG------FSVEVQPFP--DG----------------AEKSNLVAVIGP 55 (364)
T ss_pred hHHHhhCcCC-cCCc-cHHHHHHHHHHHHHHcC------CeEEEEeCC--CC----------------CccccEEEEecC
Confidence 4677887732 2222 23579999999999998 344433210 00 135799999854
Q ss_pred CCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 002429 172 KYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (923)
Q Consensus 172 ~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~ 231 (923)
+ +.+.|++++|+|+||. ++|+.|+++|++++|.+++.|.+. +.+++|.|+|..
T Consensus 56 ~-----~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~ 128 (364)
T TIGR01892 56 S-----GAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTA 128 (364)
T ss_pred C-----CCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEe
Confidence 2 2467999999999974 389999999999999999999874 357899999999
Q ss_pred CCCCCCcChHHHHhcCC
Q 002429 232 GEEEGLNGAHSFVTQHP 248 (923)
Q Consensus 232 ~EE~gl~GS~~f~~~h~ 248 (923)
+||.|..|++.++++..
T Consensus 129 ~EE~g~~G~~~~~~~~~ 145 (364)
T TIGR01892 129 DEEVGCTGAPKMIEAGA 145 (364)
T ss_pred ccccCCcCHHHHHHhcC
Confidence 99999999999996654
No 51
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.08 E-value=1.8e-09 Score=124.84 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHcCCCCCC-------CCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHAV-------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~-------GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y 159 (923)
+|+.+.+-++++|....- .+..+++.++||.++|+++|.+ ++++|.
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~-----~v~~d~---------------------- 55 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQ-----DAHYDE---------------------- 55 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCc-----eEEEcC----------------------
Confidence 588888888888743221 1224457999999999999931 244431
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeeccccCC----------------------------------------------
Q 002429 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------------------------------- 193 (923)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------------------------------- 193 (923)
+..||+++++|.. ....+.|++.||+|||+.
T Consensus 56 -~~gnv~~~~~~~~--~~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~ 132 (410)
T TIGR01882 56 -KNGYVIATIPSNT--DKDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLIT 132 (410)
T ss_pred -CceEEEEEecCCC--CCCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEE
Confidence 3689999997741 112388999999999973
Q ss_pred CCC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHh
Q 002429 194 GEG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVT 245 (923)
Q Consensus 194 spG----A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~ 245 (923)
+.| +.||++|+|+||++++.|++.+..++.+|.|+|+.+||.| .|++.+..
T Consensus 133 ~~g~~l~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g-~Ga~~l~~ 187 (410)
T TIGR01882 133 TDGTTLLGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIG-RGAHKFDV 187 (410)
T ss_pred cCCCEeecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCC-cCcchhhh
Confidence 112 3799999999999999998854445779999999999987 59988863
No 52
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=99.08 E-value=5.8e-09 Score=115.95 Aligned_cols=241 Identities=20% Similarity=0.223 Sum_probs=131.6
Q ss_pred CCCHHHHHHHHHHHHc----CCCCCCCCHHH-HHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccc
Q 002429 83 GFSELEAMKHVKALTQ----LGPHAVGSDAL-DRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (923)
Q Consensus 83 ~fs~erA~~~L~~L~~----igpr~~GS~~n-~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~ 157 (923)
..+-++..+||..+-+ |..|+..-..+ --...+ ++++++.+ ..++|.+|.... +| ..
T Consensus 56 ~lsl~eL~~Hl~tlp~~PdaIPY~TsYY~~~WGFCl~~--~~~~~L~d---g~Y~V~IdS~l~-~G------------~L 117 (386)
T PF09940_consen 56 TLSLEELKKHLHTLPDQPDAIPYRTSYYKRRWGFCLSH--NQLDALPD---GEYEVVIDSTLE-DG------------SL 117 (386)
T ss_dssp EEEHHHHGGGEE--TTSTT--B--B-SSS----EE--H--HHHHT--S---SEEEEEEEEEEE-S-------------EE
T ss_pred EEeHHHHHhhhccCCCCCCccceeeecccCCcccccCH--HHHhhCCC---CceEEEEeeeec-CC------------ce
Confidence 4677788888877754 33343332221 111111 34445542 236777765331 11 22
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC
Q 002429 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (923)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl 237 (923)
.|.+ ..++|+ +++-|++++|.++-. -|+||-||++++.+++|.|++. +.+.+.+|+|-. +.
T Consensus 118 ~ygE-----~~ipG~-----s~~EillsthiCHPs---mANdnLSG~~v~~~La~~L~~~--~~rytYRflf~P----eT 178 (386)
T PF09940_consen 118 TYGE-----FVIPGE-----SDEEILLSTHICHPS---MANDNLSGPAVLTFLAKWLKQL--PNRYTYRFLFVP----ET 178 (386)
T ss_dssp EEEE-----EEE--S-----SS-EEEEEEE----S----TTTTHHHHHHHHHHHHHHTTS----SSEEEEEEE-----TT
T ss_pred eEEE-----EEecCC-----CCCeEEEEEeccCcc---cccccccHHHHHHHHHHHHhcC--CcCceEEEEEcc----cc
Confidence 3332 234663 567899999999854 6999999999999999999985 455999999998 47
Q ss_pred cChHHHHhcCCCc--CCceEEEEeecCcCCCCcceeecCC-CHHHH-HHHHHHhcCCCCcccccccccCCCCCCCCchHH
Q 002429 238 NGAHSFVTQHPWS--TTIRVAVDLEAMGIGGRSALFQAGP-NLWAV-ENFAAVAKYPSGQIIGQDLFASGVFETATDFQV 313 (923)
Q Consensus 238 ~GS~~f~~~h~~~--~~v~a~iNlD~~G~gG~~~lfq~g~-~~~li-~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~ 313 (923)
.||-.|..+|... +++++.++|.++|..|.-. ++.+. ....+ ++.+...++-... ...+ .+.|.++|.++
T Consensus 179 IGsI~yLskn~~~l~~~v~~G~vLtcvGD~~~~s-yk~Sr~g~~~iDr~~~~vl~~~~~~---~~~~--~F~~~GsDERQ 252 (386)
T PF09940_consen 179 IGSITYLSKNLDELKKNVKAGLVLTCVGDDGAYS-YKRSRRGNTLIDRAAAHVLKHSGPN---FKIY--DFLPRGSDERQ 252 (386)
T ss_dssp HHHHHHHHH-GGGGGG-EEEEEE--S--SSS-EE-EE--TTSSSHHHHHHHHHHHHSSS----EEEE-----S-SSTHHH
T ss_pred HHHHHHHHHCHHHHhhheeeeEEEEEecCCCCcc-eecCCCCCcHHHHHHHHHHHhcCCC---ceEe--cccccCCCcce
Confidence 8999999988753 4599999999999877544 34233 22334 3333322221111 0111 24567999999
Q ss_pred hhhc-CCCeEEEEee--cCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 314 YTEV-AGLSGLDFAY--TDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 314 F~~~-~GiPgld~a~--~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
|..- .++|...+.= ++..+-|||..|+++.|+++.|+..-+.+..++..|-+.
T Consensus 253 fcSPG~dLPv~~~~Rs~yg~ypEYHTS~Dnl~fi~p~~L~~s~~~~~~~i~~lE~n 308 (386)
T PF09940_consen 253 FCSPGFDLPVGSLMRSKYGEYPEYHTSLDNLDFISPEGLEGSFEVLLEAIEILENN 308 (386)
T ss_dssp HTSTTT---EEEEESS-TT--TTTTBTTSSGGG--HHHHHHHHHHHHHHHHHHHH-
T ss_pred eecCCcCCceeeeecccccCCcccccCCCccccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 9862 1356555542 234567999999999999999999888888888877654
No 53
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=99.06 E-value=2e-09 Score=117.36 Aligned_cols=171 Identities=18% Similarity=0.176 Sum_probs=122.7
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC----
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL---- 237 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl---- 237 (923)
..|+|+. .+ ...+.++++||.|+|. -|+.||-.|+++..|+++.|...+ ..+-++.+++||.|+
T Consensus 178 ~y~~Ia~-~~-----~en~vv~i~AH~DHW~--~G~tDN~lg~~~AV~~~~~lr~~~----~~~~lv~FtAEE~g~p~~~ 245 (486)
T COG4882 178 DYNVIAV-DG-----GENGVVLIGAHLDHWY--TGFTDNILGVAQAVETAGRLRGRG----LAAGLVVFTAEEHGMPGMA 245 (486)
T ss_pred EEEEEEe-cC-----CCCCceEEeechhhhh--hcccchhhhHHHHHHHHHHHhhcC----cceeEEEEeccccCCCCCc
Confidence 3566653 22 2456899999999998 599999999999999999998754 356678889999876
Q ss_pred -----cChHHHHhcCCCcCCceEEEEeecCcCCCCcceeecCCCHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchH
Q 002429 238 -----NGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQ 312 (923)
Q Consensus 238 -----~GS~~f~~~h~~~~~v~a~iNlD~~G~gG~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~ 312 (923)
.||+.|.++.+-.+++.+.+|+|.+|.+.... ..-|.+++.-++.-+... -..+.+ .|-.
T Consensus 246 sfyWa~GSr~~lk~~k~~~~v~~~VN~Dv~g~~~lv~----~~~P~L~e~~~~~g~~~v---espe~y--------~Ds~ 310 (486)
T COG4882 246 SFYWAAGSRGLLKESKAAEEVEAYVNFDVAGYRCLVA----SGAPQLVEHALEAGAVEV---ESPEPY--------CDSI 310 (486)
T ss_pred ceeecccchHHHhhcCCchhhhheeccccccccchhh----hcChHHHHHHHHhCCcee---cCCCcc--------cchh
Confidence 48999998877788999999999999864331 234667776655421111 123333 4666
Q ss_pred HhhhcCCCeEEEEeecCC---CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 313 VYTEVAGLSGLDFAYTDK---SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 313 ~F~~~~GiPgld~a~~~~---~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
.+.. .|||.+.+....+ ...|||+.||+... ...-+++.++.++++.
T Consensus 311 ~y~~-aGiPS~Ti~SL~~~~~~e~yh~p~Dtpa~~------~n~~t~~d~a~r~v~~ 360 (486)
T COG4882 311 MYAW-AGIPSLTIHSLWCPGVQEAYHTPRDTPASW------DNAWTAVDAAVRTVTR 360 (486)
T ss_pred hhhh-cCCCeeEeeeccCCCccceecCCCCCchhH------HHHHHHHHHHHHHHhc
Confidence 6777 9999999986653 46799999998422 2334456666666643
No 54
>PRK05111 acetylornithine deacetylase; Provisional
Probab=99.06 E-value=2.4e-09 Score=122.06 Aligned_cols=128 Identities=21% Similarity=0.310 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCH-----HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHAVGSD-----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~-----~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
++..+.+++|.++.. ..+.+ ++.++++||.+.|++++ ++++++... + ..+
T Consensus 5 ~~~i~~l~~lv~i~s-~s~~e~~~~~~~~~~~~~l~~~l~~~g------~~~~~~~~~---~---------------~~~ 59 (383)
T PRK05111 5 PSFIEMYRALIATPS-ISATDPALDQSNRAVIDLLAGWFEDLG------FNVEIQPVP---G---------------TRG 59 (383)
T ss_pred hHHHHHHHHHhCcCC-cCCCCcccccchHHHHHHHHHHHHHCC------CeEEEEecC---C---------------CCC
Confidence 478899999998743 23221 23579999999999998 334433210 0 013
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p 221 (923)
..|+++++ |+ ..+.|++.+|+|+||. ++|+.|++++++++|++++.|.+. .+
T Consensus 60 ~~nvia~~-g~-----~~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~ 131 (383)
T PRK05111 60 KFNLLASL-GS-----GEGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KL 131 (383)
T ss_pred CceEEEEe-CC-----CCCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CC
Confidence 47999998 43 1236999999999973 489999999999999999999864 35
Q ss_pred CCcEEEEEeCCCCCCCcChHHHHhcC
Q 002429 222 KNAVIFLFNTGEEEGLNGAHSFVTQH 247 (923)
Q Consensus 222 ~~~I~flf~~~EE~gl~GS~~f~~~h 247 (923)
+++|+|+|.++||.|..|++.++++.
T Consensus 132 ~~~i~~~~~~~EE~g~~G~~~~~~~~ 157 (383)
T PRK05111 132 KKPLYILATADEETSMAGARAFAEAT 157 (383)
T ss_pred CCCeEEEEEeccccCcccHHHHHhcC
Confidence 67899999999999989999999654
No 55
>PRK06156 hypothetical protein; Provisional
Probab=99.05 E-value=5.2e-09 Score=124.61 Aligned_cols=138 Identities=14% Similarity=0.186 Sum_probs=102.4
Q ss_pred CHHHHHHHHHHHHcCCCCC-CC----C-HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccc
Q 002429 85 SELEAMKHVKALTQLGPHA-VG----S-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~-~G----S-~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~ 158 (923)
..+++.+.|++|.+|..-. .| . ++.....+||.+++++.|. +++ .
T Consensus 44 ~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~------~~~--~--------------------- 94 (520)
T PRK06156 44 YGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGL------DYR--N--------------------- 94 (520)
T ss_pred hHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCC------eEE--e---------------------
Confidence 4567888999999874311 11 1 1224567999999998873 221 1
Q ss_pred ccccceEE-EEEcCCCCCCCCCCeEEEEeeccccCC-------------------------CCCCCCChhHHHHHHHHHH
Q 002429 159 YSDLNHIV-LRILPKYASEAGENAILVSSHIDTVSA-------------------------GEGAGDCSSCVAVMLELAR 212 (923)
Q Consensus 159 Y~~~~NVi-~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------------spGA~Dd~sgva~mLE~ar 212 (923)
...||+ ++++|+ ..+.|++++|+|+||. ++|+.|++.|+++++.+++
T Consensus 95 --~~~~v~~~~~~g~-----~~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~ 167 (520)
T PRK06156 95 --VDNRVLEIGLGGS-----GSDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMK 167 (520)
T ss_pred --cCCeEEEEEecCC-----CCCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHH
Confidence 112344 676552 2368999999999973 2799999999999999999
Q ss_pred HHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeec
Q 002429 213 VMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 213 ~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
.|.+.+.+++++|.|+|+.+||.|..|++.++.++. ....++|+|+
T Consensus 168 ~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~~~~~D~ 213 (520)
T PRK06156 168 AIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYT---PPDYNITLDA 213 (520)
T ss_pred HHHHcCCCCCceEEEEEecccccCchhHHHHHHhcC---CCCeEEeeCC
Confidence 999887778899999999999999999999996543 3456677775
No 56
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.05 E-value=1.1e-08 Score=115.53 Aligned_cols=147 Identities=16% Similarity=0.190 Sum_probs=89.9
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcC--------CCCc
Q 002429 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI--------GGRS 268 (923)
Q Consensus 197 A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~--------gG~~ 268 (923)
+.||++||+++++++|.|.+.+.+++.+|+|+|+..||.| .|+..-+ ..++..+|.+|.... .|+.
T Consensus 181 ~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG-~gaa~~i-----~pd~a~~i~vd~~~~~p~~~~lg~Gp~ 254 (343)
T TIGR03106 181 HLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVG-SGASHAL-----PPDVAELVSVDNGTVAPGQNSSEHGVT 254 (343)
T ss_pred ecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC-ccchhcc-----cHhhhccEEEEecccCCCCCcCCCCce
Confidence 5999999999999999999876678899999999999999 5632111 123334466663321 2333
Q ss_pred ceee-cC-C-CHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCC
Q 002429 269 ALFQ-AG-P-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLL 344 (923)
Q Consensus 269 ~lfq-~g-~-~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i 344 (923)
+... .+ + ++.+.+...+.|+. .+-....+++.. .+||-..+.. -.|+|...++.- .+ +-|| .+.+
T Consensus 255 i~~~d~~~~~~~~l~~~l~~~A~~-~~Ip~Q~~~~~~----~gtDa~~~~~~~~Gi~t~~i~iP-~R-y~Hs----~e~~ 323 (343)
T TIGR03106 255 IAMADSSGPFDYHLTRKLIRLCQD-HGIPHRRDVFRY----YRSDAASAVEAGHDIRTALVTFG-LD-ASHG----YERT 323 (343)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHH-cCCCcEEEecCC----CCChHHHHHHcCCCCCEEEeecc-cc-chhh----hhhc
Confidence 3122 22 2 67777666655421 111112233321 2566655543 268999877542 22 2476 6778
Q ss_pred CHHHHHHHHHHHHHHH
Q 002429 345 KPGSLQHLGENMLDFL 360 (923)
Q Consensus 345 ~~~slq~~g~~vl~lv 360 (923)
+.+.++++.+.+.+++
T Consensus 324 ~~~D~~~~~~Ll~~~~ 339 (343)
T TIGR03106 324 HIDALEALANLLVAYA 339 (343)
T ss_pred cHHHHHHHHHHHHHHh
Confidence 8888888766655544
No 57
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.05 E-value=3.1e-09 Score=121.56 Aligned_cols=149 Identities=16% Similarity=0.207 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.|++|.+|..-.....++.++++||.++|+++| ++++++. ...+. . ... .....|+
T Consensus 5 ~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G------~~~~~~~--~~~~~--~------~~~--~~~~~~~ 66 (394)
T PRK08651 5 MFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELG------FSTEIIE--VPNEY--V------KKH--DGPRPNL 66 (394)
T ss_pred HHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcC------CeEEEEe--cCccc--c------ccc--cCCcceE
Confidence 478899999999984321111334689999999999998 3344332 11000 0 000 0124678
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++. +. .++.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+ +++|
T Consensus 67 ~~~~-~~-----~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v 137 (394)
T PRK08651 67 IARR-GS-----GNPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNI 137 (394)
T ss_pred EEEe-CC-----CCceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCE
Confidence 8764 32 2378999999999974 2788999999999999999998754 7899
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCc
Q 002429 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
+|+|..+||.|..|++.++++... +...++..|..|
T Consensus 138 ~~~~~~~EE~g~~G~~~~~~~~~~--~~d~~i~~~~~~ 173 (394)
T PRK08651 138 ELAIVPDEETGGTGTGYLVEEGKV--TPDYVIVGEPSG 173 (394)
T ss_pred EEEEecCccccchhHHHHHhccCC--CCCEEEEecCCC
Confidence 999999999988999999965432 234556666444
No 58
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.04 E-value=2.2e-09 Score=121.86 Aligned_cols=122 Identities=16% Similarity=0.207 Sum_probs=95.0
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
++.+.|++|.++. .-|..+.++++||.++|+++| ++++.. .. .+..|+++
T Consensus 3 ~~~~~l~~Lv~ip---s~s~~e~~~~~~l~~~l~~~G------~~~~~~--~~-------------------~~~~n~~~ 52 (375)
T PRK13009 3 DVLELAQDLIRRP---SVTPDDAGCQDLLAERLEALG------FTCERM--DF-------------------GDVKNLWA 52 (375)
T ss_pred hHHHHHHHHhCCC---CCCCchhhHHHHHHHHHHHcC------CeEEEe--cc-------------------CCCcEEEE
Confidence 5677888888862 334455788999999999987 333321 10 13468999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002429 168 RILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~ 226 (923)
++ |. +.+.|++++|+|+||. ++|+.||++|++++|++++.|.+.+.+++++|+
T Consensus 53 ~~-g~-----~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~ 126 (375)
T PRK13009 53 RR-GT-----EGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIA 126 (375)
T ss_pred Ee-cC-----CCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEE
Confidence 87 42 3468999999999985 269999999999999999999887777889999
Q ss_pred EEEeCCCCCCC-cChHHHHh
Q 002429 227 FLFNTGEEEGL-NGAHSFVT 245 (923)
Q Consensus 227 flf~~~EE~gl-~GS~~f~~ 245 (923)
|+|..+||.+. .|++.+++
T Consensus 127 ~~~~~~EE~~~~~G~~~~~~ 146 (375)
T PRK13009 127 FLITSDEEGPAINGTVKVLE 146 (375)
T ss_pred EEEEeecccccccCHHHHHH
Confidence 99999999754 69998874
No 59
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.04 E-value=1.1e-09 Score=111.55 Aligned_cols=165 Identities=23% Similarity=0.306 Sum_probs=114.1
Q ss_pred EEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc-ChHH
Q 002429 183 LVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN-GAHS 242 (923)
Q Consensus 183 ll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~-GS~~ 242 (923)
|+.+|+|+||. ++|+.|++.++++++.++|.|++.+..++++|+|+|+.+||.|.. |++.
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~ 80 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKH 80 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHH
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhh
Confidence 68999999992 589999999999999999999988889999999999999999998 9999
Q ss_pred HHhcCC-CcCCceEEEEeecCcCCCCcceeecCCCHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhh--cCC
Q 002429 243 FVTQHP-WSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE--VAG 319 (923)
Q Consensus 243 f~~~h~-~~~~v~a~iNlD~~G~gG~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~--~~G 319 (923)
++++.. ...+....+..|..+.+.-. ...++.+++...++.+...+... .....+..||...|.+ ..+
T Consensus 81 l~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~tD~~~~~~~~~~~ 151 (189)
T PF01546_consen 81 LLEEGAFFGLHPDYVIIGEPTGKGGVG----SDNDPPLVQALQAAAQEVGGEPP-----EPVASGGGTDAGFLAEVKGLG 151 (189)
T ss_dssp HHHHCEEEEEEESEEEECECETTSEEE----HCTCHHHHHHHHHHHHHTTSSEE-----EEEEESSSSTHHHHHCHHHTT
T ss_pred hhhhccccccccccccccccccccccc----ccccHHHHHHHHHHHHHHhhccc-----cccceeccccchhhhhhhccc
Confidence 997631 12235556666644433210 22355566666655433332111 1113457899999995 478
Q ss_pred CeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 002429 320 LSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (923)
Q Consensus 320 iPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~ 361 (923)
+|.+.+.... ...|++. |+++.+.+....+.+..+++
T Consensus 152 ~~~i~~G~~~--~~~H~~~---E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 152 IPAIGFGPGG--SNAHTPD---EYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp EEEEEEESCE--ESTTSTT----EEEHHHHHHHHHHHHHHHH
T ss_pred cceeeeCCCC--CCCCCCC---cEecHHHHHHHHHHHHHHHh
Confidence 8888765544 5678865 45557777777776666653
No 60
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=99.04 E-value=2.8e-09 Score=122.82 Aligned_cols=145 Identities=20% Similarity=0.237 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.|+.+.++.... ..+..++++|+.++|++++. .++.+.... .. +..|++
T Consensus 13 ~~~~~~l~~lv~~~s~s--~~~~~~~~~~l~~~l~~~g~------~~~~~~~~~----------------~~--~~~n~~ 66 (409)
T COG0624 13 DDILELLKELVRIPSVS--AGEEAEAAELLAEWLEELGF------EVEEDEVGP----------------GP--GRPNLV 66 (409)
T ss_pred HHHHHHHHHHhcCCCCC--cccchHHHHHHHHHHHHcCC------ceEEeecCC----------------CC--CceEEE
Confidence 45668888888864322 35567999999999999883 344332110 00 356999
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++.+. .+++.|++++|+|+||. ++|+.||+.++++++.+++.+.+.+..++.+|
T Consensus 67 ~~~~~~----~~~~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v 142 (409)
T COG0624 67 ARLGGG----DGGPTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDV 142 (409)
T ss_pred EEecCC----CCCCeEEEeccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEE
Confidence 999874 23389999999999986 38999999999999999999999877888999
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCC--cCCceEEEEeec
Q 002429 226 IFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEA 261 (923)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~--~~~v~a~iNlD~ 261 (923)
.+++..+||.|..|...++.++.. ..+..+.+..|.
T Consensus 143 ~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~d~~i~~E~ 180 (409)
T COG0624 143 RLLFTADEESGGAGGKAYLEEGEEALGIRPDYEIVGEP 180 (409)
T ss_pred EEEEEeccccCCcchHHHHHhcchhhccCCCEEEeCCC
Confidence 999999999999999999876642 345677777776
No 61
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.03 E-value=2.2e-09 Score=126.04 Aligned_cols=126 Identities=14% Similarity=0.149 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHcCCCCCC---------CCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHAV---------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~---------GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~ 157 (923)
+++.+.|++|.+|..... ...+..++.+|+.+.++++|. +++..
T Consensus 13 ~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~------~~~~~--------------------- 65 (466)
T TIGR01886 13 DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGF------TTKNF--------------------- 65 (466)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCC------eEEEe---------------------
Confidence 567888999988743211 013446789999999999982 33321
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 002429 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (923)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~~ 218 (923)
.|+++++.+. .+++.|++.+|+|+||. ++|+.||+.|++++|.+++.|++.+
T Consensus 66 -----~~~~~~~~~~----~~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~ 136 (466)
T TIGR01886 66 -----DNYAGHVEYG----AGDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELG 136 (466)
T ss_pred -----cCCceeEEec----CCCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhC
Confidence 1222222221 23468999999999985 4899999999999999999999888
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 002429 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (923)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (923)
.+++++|+|+|..+||.|..|++.+++++.
T Consensus 137 ~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 166 (466)
T TIGR01886 137 LPPSKKIRFVVGTNEETGWVDMDYYFKHEE 166 (466)
T ss_pred CCCCCCEEEEEECccccCcccHHHHHhcCc
Confidence 888999999999999999999999997654
No 62
>PRK08554 peptidase; Reviewed
Probab=99.02 E-value=4.2e-09 Score=122.81 Aligned_cols=141 Identities=17% Similarity=0.234 Sum_probs=102.5
Q ss_pred HHHHHHHHHHcCCCCCCCC---HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 88 EAMKHVKALTQLGPHAVGS---DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS---~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
++.+.|++|.+|.....++ ....++.+|+.+.++++|. +++.. .. .+..|
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~------~~~~~--~~-------------------~~~~~ 54 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGI------ESELI--EK-------------------DGYYA 54 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCC------eEEEE--ec-------------------CCceE
Confidence 4678888998874422111 2246899999999999982 33321 10 02368
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
+++++ |. .++.|++.+|+|+||. ++|+.|+++|++++|.+++.|.+. .++++
T Consensus 55 l~~~~-~~-----~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~ 126 (438)
T PRK08554 55 VYGEI-GE-----GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGK 126 (438)
T ss_pred EEEEe-CC-----CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCC
Confidence 88886 32 2357999999999975 389999999999999999999874 36788
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCC-CcCCceEEEEeecCc
Q 002429 225 VIFLFNTGEEEGLNGAHSFVTQHP-WSTTIRVAVDLEAMG 263 (923)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~-~~~~v~a~iNlD~~G 263 (923)
|.|+|+.+||.|..++..++++.. ......++|+.|..+
T Consensus 127 i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~iv~Ept~ 166 (438)
T PRK08554 127 VIFAFTGDEEIGGAMAMHIAEKLREEGKLPKYMINADGIG 166 (438)
T ss_pred EEEEEEcccccCccccHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 999999999998877777664432 224568889999754
No 63
>PRK13004 peptidase; Reviewed
Probab=98.98 E-value=8e-09 Score=118.80 Aligned_cols=136 Identities=18% Similarity=0.233 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.|++|.++ |- -|.++.++++||.++|+++|-+ ..+++ ...|+
T Consensus 14 ~~~~~~~l~~lv~i-ps--~s~~e~~~a~~l~~~l~~~G~~-----~~~~~------------------------~~~n~ 61 (399)
T PRK13004 14 KADMTRFLRDLIRI-PS--ESGDEKRVVKRIKEEMEKVGFD-----KVEID------------------------PMGNV 61 (399)
T ss_pred HHHHHHHHHHHhcC-CC--CCCchHHHHHHHHHHHHHcCCc-----EEEEc------------------------CCCeE
Confidence 35788999999986 22 3344568899999999999831 01111 22588
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
++++.+. .+.|++++|+|+||. ++|+.||++|++++|.+++.|.+.+..++.+
T Consensus 62 ~a~~~~~------~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~ 135 (399)
T PRK13004 62 LGYIGHG------KKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYT 135 (399)
T ss_pred EEEECCC------CcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCe
Confidence 9988542 267999999999985 2689999999999999999999887778899
Q ss_pred EEEEEeCCCCC-CCcChHHHHhcCCCcCCceEEEEeec
Q 002429 225 VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 225 I~flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
|+|+|..+||. +..|++.++++... +...++..|.
T Consensus 136 i~~~~~~~EE~~~g~~~~~~~~~~~~--~~d~~i~~e~ 171 (399)
T PRK13004 136 LYVTGTVQEEDCDGLCWRYIIEEDKI--KPDFVVITEP 171 (399)
T ss_pred EEEEEEcccccCcchhHHHHHHhcCC--CCCEEEEccC
Confidence 99999999996 45678887754221 2344455443
No 64
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=98.97 E-value=6.8e-09 Score=117.88 Aligned_cols=135 Identities=19% Similarity=0.199 Sum_probs=97.6
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEE
Q 002429 90 MKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRI 169 (923)
Q Consensus 90 ~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i 169 (923)
.+.|++|.++. .-|.++.++++||.++|+++| ++++... . .+..|++++.
T Consensus 2 ~~~l~~lv~ip---s~s~~e~~~~~~i~~~l~~~G------~~~~~~~--~-------------------~~~~~~~~~~ 51 (370)
T TIGR01246 2 TELAKELISRP---SVTPNDAGCQDIIAERLEKLG------FEIEWMH--F-------------------GDTKNLWATR 51 (370)
T ss_pred hHHHHHHhcCC---CCCcchHHHHHHHHHHHHHCC------CEEEEEe--c-------------------CCCceEEEEe
Confidence 35677888762 334455789999999999998 3333321 0 0235888875
Q ss_pred cCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 002429 170 LPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (923)
Q Consensus 170 ~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~fl 228 (923)
|. ..+.|++++|+|+||. ++|+.|++.|+++++++++.+.+.+.+++++|+|+
T Consensus 52 -g~-----~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~ 125 (370)
T TIGR01246 52 -GT-----GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLL 125 (370)
T ss_pred -cC-----CCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 31 3468999999999985 27899999999999999999988776778899999
Q ss_pred EeCCCCCCC-cChHHHHhcCCC-cCCceEEEEee
Q 002429 229 FNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLE 260 (923)
Q Consensus 229 f~~~EE~gl-~GS~~f~~~h~~-~~~v~a~iNlD 260 (923)
|..+||.+. .|++.+++.... ......++..|
T Consensus 126 ~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~e 159 (370)
T TIGR01246 126 ITSDEEGTAIDGTKKVVETLMARDELIDYCIVGE 159 (370)
T ss_pred EEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcC
Confidence 999999864 699988743211 11345555544
No 65
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=98.96 E-value=7e-09 Score=118.40 Aligned_cols=134 Identities=24% Similarity=0.216 Sum_probs=96.6
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCC
Q 002429 93 VKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPK 172 (923)
Q Consensus 93 L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~ 172 (923)
|++|.+|.. + |.++.++.+||.++|++++.. .++++. ...||++++.+.
T Consensus 2 l~~Lv~ipS-~--s~~e~~~~~~i~~~l~~~g~~-----~~~~~~-----------------------~~~nvva~~~~~ 50 (373)
T TIGR01900 2 LQQIMDIFS-P--SDHEGPIADEIEAALNNLELE-----GLEVFR-----------------------FGDNVLARTDFG 50 (373)
T ss_pred hHHHhCCCC-C--CchHHHHHHHHHHHHhhcccc-----CceEEE-----------------------ECCEEEEecCCC
Confidence 567777632 2 344568999999999988621 122221 013899987431
Q ss_pred CCCCCCCCeEEEEeeccccCC-------------------------------CCCCCCChhHHHHHHHHHHHHHh--cCC
Q 002429 173 YASEAGENAILVSSHIDTVSA-------------------------------GEGAGDCSSCVAVMLELARVMSQ--WAH 219 (923)
Q Consensus 173 ~~~~~~~~~vll~aH~DSv~~-------------------------------spGA~Dd~sgva~mLE~ar~L~~--~~~ 219 (923)
+.+.|++++|+|+||. ++|+.|+++|+|+||.+++.|.+ .+.
T Consensus 51 -----~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~ 125 (373)
T TIGR01900 51 -----KASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPET 125 (373)
T ss_pred -----CCCeEEEeCccccccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhcccc
Confidence 2467999999999962 27899999999999999999954 344
Q ss_pred CCCCcEEEEEeCCCCCCC--cChHHHHhcCCCcCCceEEEEeecC
Q 002429 220 EFKNAVIFLFNTGEEEGL--NGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 220 ~p~~~I~flf~~~EE~gl--~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
.++.+|.|+|..+||.+. .|+..++++++...+..++|..|..
T Consensus 126 ~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ept 170 (373)
T TIGR01900 126 ELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLAADFAIIGEPT 170 (373)
T ss_pred CCCCCEEEEEEecccccCCCCCHHHHHHhCcccccCCEEEEECCC
Confidence 678899999999999863 6999998765433345677777643
No 66
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=98.96 E-value=5.9e-09 Score=116.99 Aligned_cols=125 Identities=22% Similarity=0.277 Sum_probs=93.8
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcC
Q 002429 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (923)
Q Consensus 92 ~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g 171 (923)
.|++|.++ |-+.| .++++++||.++|++++. +++.+ ...|+++.. +
T Consensus 2 ~l~~lv~i-~s~s~--~e~~~~~~l~~~l~~~g~------~~~~~------------------------~~~~~~~~~-~ 47 (336)
T TIGR01902 2 LLKDLLEI-YSPSG--KEANAAKFLEEISKDLGL------KLIID------------------------DAGNFILGK-G 47 (336)
T ss_pred hHHHHhcC-CCCCc--chHHHHHHHHHHHHHcCC------EEEEC------------------------CCCcEEEEe-C
Confidence 46778876 33333 356899999999999983 33211 224777754 2
Q ss_pred CCCCCCCCCeEEEEeeccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcC
Q 002429 172 KYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNG 239 (923)
Q Consensus 172 ~~~~~~~~~~vll~aH~DSv~~------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~G 239 (923)
. +.+.|++++|+|+||. ++|+.|+++|+|+||++++.|.+. ..+|+|++..+||.|..|
T Consensus 48 ~-----~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G 118 (336)
T TIGR01902 48 D-----GHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKG 118 (336)
T ss_pred C-----CCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCcc
Confidence 1 2478999999999973 489999999999999999999764 358999999999999999
Q ss_pred hHHHHhcCCCcCCceEEEEeecCc
Q 002429 240 AHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 240 S~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
++.+++++.. .+++..|..+
T Consensus 119 ~~~~~~~~~~----~~~ii~ept~ 138 (336)
T TIGR01902 119 AREVIDKNYP----FYVIVGEPSG 138 (336)
T ss_pred HHHHHhhcCC----CEEEEecCCC
Confidence 9999966432 2667777544
No 67
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=98.94 E-value=5.4e-08 Score=110.04 Aligned_cols=149 Identities=20% Similarity=0.172 Sum_probs=99.0
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcC------------
Q 002429 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI------------ 264 (923)
Q Consensus 197 A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~------------ 264 (923)
|-||..||++++|++|.|.+. +++.+++++|+.-||.|+.||+.-+.+. +...+|.+|..-+
T Consensus 176 alDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~i----~pD~aI~vDv~~~~d~~~~~~~~lg 249 (350)
T TIGR03107 176 AWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTKF----NPDIFFAVDCSPAGDIYGDQGGKLG 249 (350)
T ss_pred ccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhhC----CCCEEEEEecCCcCCCCCCCccccC
Confidence 889999999999999999863 5778999999999999999999755322 2246777775433
Q ss_pred CCCcceee-cCC--CHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchH--HhhhcCCCeEEEEeecCCCCCCCCcCC
Q 002429 265 GGRSALFQ-AGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQ--VYTEVAGLSGLDFAYTDKSAVYHTKND 339 (923)
Q Consensus 265 gG~~~lfq-~g~--~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~--~F~~~~GiPgld~a~~~~~~~YHT~~D 339 (923)
.|+.+.+. .++ ++.+.+...+.|+. .+-. .|.... ..+||-. .+.. .|+|.+.++-- .+ +-||+.
T Consensus 250 ~Gp~i~~~D~~~i~~~~l~~~l~~~A~~-~~I~-~Q~~~~----~gGtDa~~~~~~~-~Gvpt~~i~ip-~R-y~Hs~~- 319 (350)
T TIGR03107 250 EGTLLRFFDPGHIMLPRMKDFLLTTAEE-AGIK-YQYYVA----KGGTDAGAAHLKN-SGVPSTTIGVC-AR-YIHSHQ- 319 (350)
T ss_pred CCceEEEecCCCCCCHHHHHHHHHHHHH-cCCC-cEEecC----CCCchHHHHHHhC-CCCcEEEEccC-cc-cccChh-
Confidence 24444222 233 67777776665432 1110 111111 1356665 6665 79999988532 22 258865
Q ss_pred CcCCCCHHHHHHHHHHHHHHHHHH
Q 002429 340 RLDLLKPGSLQHLGENMLDFLLQT 363 (923)
Q Consensus 340 t~d~i~~~slq~~g~~vl~lv~~l 363 (923)
+.++.+.+.++.+.+..++..+
T Consensus 320 --e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 320 --TLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred --heeeHHHHHHHHHHHHHHHHhc
Confidence 5567888888888888877665
No 68
>PRK09961 exoaminopeptidase; Provisional
Probab=98.92 E-value=6.3e-08 Score=109.55 Aligned_cols=151 Identities=15% Similarity=0.119 Sum_probs=98.4
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcC------------
Q 002429 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI------------ 264 (923)
Q Consensus 197 A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~------------ 264 (923)
|-||..||++++|++|.+++. ++..+++|+|+..||.|+.||+.-+.. . +-..+|.+|.+-.
T Consensus 164 alDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i--~pd~~I~vDv~~~~d~~~~~~~~~~ 237 (344)
T PRK09961 164 AFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V--SPDVAIVLDTACWAKNFDYGAANHR 237 (344)
T ss_pred echhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c--CCCEEEEEeccCCCCCCCCCCCccc
Confidence 889999999999999999763 468999999999999999999987633 2 2345777775432
Q ss_pred ---CCCcceee-cCC--CHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCc
Q 002429 265 ---GGRSALFQ-AGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTK 337 (923)
Q Consensus 265 ---gG~~~lfq-~g~--~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~ 337 (923)
+|+.+-+. .++ ++.+.+...+.++.-. .....+.+. ..+||-..|.. ..|+|.+.+..- .. +-||+
T Consensus 238 ~lg~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~-Ip~Q~~~~~----ggGTDa~~~~~~~~Giptv~ig~p-~r-y~Hs~ 310 (344)
T PRK09961 238 QIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIG-IPLQADMFS----NGGTDGGAVHLTGTGVPTVVMGPA-TR-HGHCA 310 (344)
T ss_pred ccCCCceEEEccCCcCCCHHHHHHHHHHHHHcC-CCcEEEecC----CCcchHHHHHHhCCCCCEEEechh-hh-cccCh
Confidence 22332122 122 5667766666543211 111111221 23688887653 268999988653 22 34885
Q ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHH
Q 002429 338 NDRLDLLKPGSLQHLGENMLDFLLQT 363 (923)
Q Consensus 338 ~Dt~d~i~~~slq~~g~~vl~lv~~l 363 (923)
. |.++.+.+.++.+.+..++..+
T Consensus 311 ~---E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 311 A---SIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred h---heEEHHHHHHHHHHHHHHHHHc
Confidence 4 5677788888877777776554
No 69
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=98.92 E-value=1.1e-08 Score=119.47 Aligned_cols=124 Identities=19% Similarity=0.267 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHcCCCCC----CC-----CHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHA----VG-----SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (923)
Q Consensus 87 erA~~~L~~L~~igpr~----~G-----S~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~ 157 (923)
+.+.+.|++|.+|..-. .+ .++..++.+|+.+++++++. +++ .
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~------~~~--~-------------------- 53 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGF------TTE--N-------------------- 53 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCc------eEE--E--------------------
Confidence 35778888998874321 11 12346899999999999872 222 1
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 002429 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (923)
Q Consensus 158 ~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~~ 218 (923)
..|++++.... ...+.|++++|+|+||. ++|+.|++.|+++++++++.|.+.+
T Consensus 54 ----~~~~~~~~~~~----~~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~ 125 (447)
T TIGR01887 54 ----VDNYAGYAEYG----QGEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELG 125 (447)
T ss_pred ----ecCceEEEEeC----CCCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcC
Confidence 11222222211 12357999999999984 3899999999999999999999887
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhc
Q 002429 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (923)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (923)
.+++++|.|+|+.+||.|+.|++.++.+
T Consensus 126 ~~~~~~i~~~~~~dEE~g~~g~~~~l~~ 153 (447)
T TIGR01887 126 LKLKKKIRFIFGTDEETGWACIDYYFEH 153 (447)
T ss_pred CCCCCcEEEEEECCcccCcHhHHHHHHh
Confidence 7788999999999999999999999854
No 70
>PRK09864 putative peptidase; Provisional
Probab=98.88 E-value=1.4e-07 Score=106.63 Aligned_cols=146 Identities=21% Similarity=0.197 Sum_probs=96.6
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcC------------
Q 002429 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI------------ 264 (923)
Q Consensus 197 A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~------------ 264 (923)
|-||..||++++|++|.|.+ ++.+++|+|+.-||.|+.||+.-+.+.+ . ..+|.+|..-+
T Consensus 173 alDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~i~--P--DiaIavDvt~~~d~p~~~~~~~~ 244 (356)
T PRK09864 173 ALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEHIK--P--DVVIVLDTAVAGDVPGIDNIKYP 244 (356)
T ss_pred eCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhcCC--C--CEEEEEecccCCCCCCCcccccc
Confidence 89999999999999999964 6799999999999999999998764322 2 34677774421
Q ss_pred ----CCCcc-eeecCC--CHHHHHHHHHHhc---CCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCC
Q 002429 265 ----GGRSA-LFQAGP--NLWAVENFAAVAK---YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAV 333 (923)
Q Consensus 265 ----gG~~~-lfq~g~--~~~li~~y~~~a~---~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~ 333 (923)
+|+.+ .+..++ ++.+.+...+.|+ .|+- .+.... .+||-..+.. -.|+|.+.++.- .+ +
T Consensus 245 ~~lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~Ip~Q----~~~~~~----ggTDa~~i~~~~~Gvpt~~isiP-~R-Y 314 (356)
T PRK09864 245 LKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQ----FSTMKT----GATDGGRYNVMGGGRPVVALCLP-TR-Y 314 (356)
T ss_pred cccCCCCeEEEccCCccCCHHHHHHHHHHHHHcCCCce----EEEcCC----CCchHHHHHHhCCCCcEEEEeec-cC-c
Confidence 23333 232243 6777777666542 2321 122222 3566666543 279999887542 23 2
Q ss_pred CCCcCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 002429 334 YHTKNDRLDLLKPGSLQHLGENMLDFLLQT 363 (923)
Q Consensus 334 YHT~~Dt~d~i~~~slq~~g~~vl~lv~~l 363 (923)
-||+. +.++.+.++++.+.+..++..+
T Consensus 315 ~Hs~~---e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 315 LHANS---GMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred CCCcc---eEeEHHHHHHHHHHHHHHHHhc
Confidence 58865 4566777778777777777665
No 71
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=98.85 E-value=3.5e-08 Score=112.04 Aligned_cols=132 Identities=15% Similarity=0.200 Sum_probs=97.7
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEc
Q 002429 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (923)
Q Consensus 91 ~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~ 170 (923)
+.+++|.++ |.+.| .+.++++||.++|++++. +++.+ . ....|+++++.
T Consensus 3 ~~~~~L~~i-ps~s~--~E~~~a~~l~~~l~~~g~------~~~~~--~--------------------~~~~~vva~~~ 51 (363)
T TIGR01891 3 DIRRHLHEH-PELSF--EEFKTSSLIAEALESLGI------EVRRG--V--------------------GGATGVVATIG 51 (363)
T ss_pred HHHHHHhcC-CCCCC--chHHHHHHHHHHHHHcCC------ceEec--C--------------------CCCcEEEEEEe
Confidence 567788886 55554 446899999999999983 33221 0 02478999986
Q ss_pred CCCCCCCCCCeEEEEeeccccCCC-----------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 002429 171 PKYASEAGENAILVSSHIDTVSAG-----------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (923)
Q Consensus 171 g~~~~~~~~~~vll~aH~DSv~~s-----------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~E 233 (923)
++ .+.+.|++++|+|+||.. +|+ ++++|+++.+++.|++.+.+++++|.|+|+.+|
T Consensus 52 ~~----~~~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~---~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dE 124 (363)
T TIGR01891 52 GG----KPGPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGH---DLHTAILLGTAKLLKKLADLLEGTVRLIFQPAE 124 (363)
T ss_pred CC----CCCCEEEEEeccCCCCcccccCCCcccCCCCceecCcC---HHHHHHHHHHHHHHHhchhhCCceEEEEEeecC
Confidence 63 234789999999999841 333 367899999999998866667889999999999
Q ss_pred CCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 234 E~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
|.+ .|++.+++++ +.+++..+++.|..
T Consensus 125 E~~-~G~~~~~~~~-~~~~~d~~i~~e~~ 151 (363)
T TIGR01891 125 EGG-GGATKMIEDG-VLDDVDAILGLHPD 151 (363)
T ss_pred cCc-chHHHHHHCC-CCCCcCEEEEECCC
Confidence 986 7999998553 34556778887753
No 72
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=98.82 E-value=4.9e-08 Score=112.12 Aligned_cols=122 Identities=18% Similarity=0.244 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.+++|.++. -+. ..+.++.+||.++|+++|.+ .++++ ...|++
T Consensus 13 ~~~~~~~~~lv~i~-s~s--~~e~~~~~~l~~~l~~~G~~-----~~~~~------------------------~~~n~~ 60 (395)
T TIGR03320 13 GDMIRFLRDLVAIP-SES--GDEKRVAERIKEEMEKLGFD-----KVEID------------------------PMGNVL 60 (395)
T ss_pred HHHHHHHHHHHcCC-CCC--CchHHHHHHHHHHHHHhCCc-----EEEEC------------------------CCCCEE
Confidence 67888899999872 333 33468899999999999831 01111 124788
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++ |. +.+.|++++|+|+||. ++|+.|++.|+|++|.+++.|.+.+..++.+|
T Consensus 61 ~~~-g~-----~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i 134 (395)
T TIGR03320 61 GYI-GH-----GPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTL 134 (395)
T ss_pred EEe-CC-----CCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceE
Confidence 887 32 2367999999999984 38999999999999999999998776677899
Q ss_pred EEEEeCCCCCC-CcChHHHHhc
Q 002429 226 IFLFNTGEEEG-LNGAHSFVTQ 246 (923)
Q Consensus 226 ~flf~~~EE~g-l~GS~~f~~~ 246 (923)
+|++..+||.+ ..|++.++.+
T Consensus 135 ~~~~~~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03320 135 LVTGTVQEEDCDGLCWQYIIEE 156 (395)
T ss_pred EEEecccccccCchHHHHHHHh
Confidence 99999999964 2344555543
No 73
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=98.80 E-value=7e-08 Score=110.91 Aligned_cols=122 Identities=19% Similarity=0.265 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.+++|.++ |-+. ..+.++.+||.+++++++.+ .++.+ ...|++
T Consensus 13 ~~~~~~l~~Lv~i-ps~s--~~e~~~~~~l~~~l~~~g~~-----~~~~~------------------------~~~~v~ 60 (395)
T TIGR03526 13 GDMIRFLRDLVAI-PSES--GDEGRVALRIKQEMEKLGFD-----KVEID------------------------PMGNVL 60 (395)
T ss_pred HHHHHHHHHHhcC-CCCC--CchHHHHHHHHHHHHHcCCc-----eEEEc------------------------CCCcEE
Confidence 5778889999986 3333 33458899999999998721 01111 225788
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++ |. ..+.|++.+|+|+||. ++|+.|++.|++++|.+++.|.+.+..++.++
T Consensus 61 ~~~-g~-----~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v 134 (395)
T TIGR03526 61 GYI-GH-----GPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTL 134 (395)
T ss_pred EEe-CC-----CCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceE
Confidence 887 42 2357999999999984 38999999999999999999998776677899
Q ss_pred EEEEeCCCCC-CCcChHHHHhc
Q 002429 226 IFLFNTGEEE-GLNGAHSFVTQ 246 (923)
Q Consensus 226 ~flf~~~EE~-gl~GS~~f~~~ 246 (923)
.|++..+||. +..|++.++++
T Consensus 135 ~~~~~~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03526 135 LVTGTVQEEDCDGLCWQYIIEE 156 (395)
T ss_pred EEEEecccccCCcHhHHHHHhc
Confidence 9999999993 44577777644
No 74
>PRK08737 acetylornithine deacetylase; Provisional
Probab=98.78 E-value=6.8e-08 Score=110.09 Aligned_cols=129 Identities=21% Similarity=0.230 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHcCCCCC-CCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 86 ELEAMKHVKALTQLGPHA-VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~-~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
.+++.+.|++|.+|.... .++.++.++.+||.++|+ + ++++++. . + .+..|
T Consensus 5 ~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g------~~~~~~~--~--~----------------~~~~n 56 (364)
T PRK08737 5 LESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--G------FQVEVID--H--G----------------AGAVS 56 (364)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--C------CEEEEec--C--C----------------CCceE
Confidence 457889999999985432 222234688999999996 3 3344331 0 0 03468
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
++++ .|+ +.|++++|+|+||. ++|+.|+++|+|+||.+++. ++.+|
T Consensus 57 li~~-~g~-------~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v 121 (364)
T PRK08737 57 LYAV-RGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDA 121 (364)
T ss_pred EEEE-cCC-------CeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCE
Confidence 8885 231 46999999999984 37999999999999999874 35689
Q ss_pred EEEEeCCCCCCC-cChHHHHhcCCCcCCceEEEEee
Q 002429 226 IFLFNTGEEEGL-NGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
.|+|+.+||.|. .|++.++++.. +..++|..|
T Consensus 122 ~~~~~~dEE~g~~~g~~~~~~~~~---~~~~~iv~E 154 (364)
T PRK08737 122 AFLFSSDEEANDPRCVAAFLARGI---PYEAVLVAE 154 (364)
T ss_pred EEEEEcccccCchhhHHHHHHhCC---CCCEEEEcC
Confidence 999999999987 69899986542 234555554
No 75
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=98.78 E-value=2.2e-07 Score=103.68 Aligned_cols=195 Identities=17% Similarity=0.256 Sum_probs=131.5
Q ss_pred ccceEEEEEcCCCC---CCCCCCeEEEEeeccccCC----CCCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEE
Q 002429 161 DLNHIVLRILPKYA---SEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLF 229 (923)
Q Consensus 161 ~~~NVi~~i~g~~~---~~~~~~~vll~aH~DSv~~----spGA~Dd~sgva~mLE~ar~L~~~----~~~p~~~I~flf 229 (923)
.+.||.+++.+... +....+.|++.||||+.+. ++||.-||+|++++||++|.+++- ...+++++.|+.
T Consensus 192 ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~l 271 (555)
T KOG2526|consen 192 KILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFIL 271 (555)
T ss_pred ccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEE
Confidence 68999999983111 1235689999999999764 579999999999999999999873 245689999999
Q ss_pred eCCCCCCCcChHHHHhcCC--CcCCceEEEEeecCcCCCCcceeecC-C--CHHHHHHH----HHHhcCCCCcccccccc
Q 002429 230 NTGEEEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAG-P--NLWAVENF----AAVAKYPSGQIIGQDLF 300 (923)
Q Consensus 230 ~~~EE~gl~GS~~f~~~h~--~~~~v~a~iNlD~~G~gG~~~lfq~g-~--~~~li~~y----~~~a~~p~~~~l~~e~f 300 (923)
++|--...+|++.|.+-.. .++++..+|.+|++|.+..+.....+ | +...+..+ ...+++..-..... -
T Consensus 272 t~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLdtig~~~s~l~mHvsKpP~dnt~i~qffr~l~svAek~~~~v~~k--h 349 (555)
T KOG2526|consen 272 TAAGKLNYQGTKKWLEFDDADLQKNVDFAICLDTIGRKTSGLFMHVSKPPSDNTVIAQFFRRLNSVAEKKNIEVVTK--H 349 (555)
T ss_pred ccCccccccchhhhhhcchHHHHhcccEEEEhhhhccccCceEEEccCCCCcchHHHHHHHHhhhhchhcceEEEEE--e
Confidence 9999999999999996322 24799999999999998555543333 3 22333332 23333322111000 0
Q ss_pred cCCCCCC-----CCchHHhhhcCCCeEEEEeecCCC--CCCCCcC-CCcCCCCHHHHHHHHHHHHHHH
Q 002429 301 ASGVFET-----ATDFQVYTEVAGLSGLDFAYTDKS--AVYHTKN-DRLDLLKPGSLQHLGENMLDFL 360 (923)
Q Consensus 301 ~~g~ips-----~TD~~~F~~~~GiPgld~a~~~~~--~~YHT~~-Dt~d~i~~~slq~~g~~vl~lv 360 (923)
+ .|.- .=.|.-|.- ..+|+..+.....+ +.-.+-. |+...++.++|-+..+.+.+.+
T Consensus 350 k--kInla~s~lAWEHErFsi-kR~pAfTLS~l~Sprdp~rnsi~~d~rsrldedtLi~ntRlIaEAl 414 (555)
T KOG2526|consen 350 K--KINLASSRLAWEHERFSI-KRMPAFTLSTLPSPRDPARNSILLDLRSRLDEDTLIDNTRLIAEAL 414 (555)
T ss_pred e--eEeeccchhhhhhhhhhh-hcccceeeccCCCCcchhhccccccchhhhhhhhhhhhhhHHHHHH
Confidence 0 0111 124666765 78999998876432 2334444 8888999988876555554433
No 76
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.61 E-value=2.4e-07 Score=104.00 Aligned_cols=158 Identities=18% Similarity=0.219 Sum_probs=121.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhccc-ccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE-SKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~-~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
..+.||+.+....|++. |-..||+++..-+++|..-|.++-. +.+|+ |.+.+. +. ...| .
T Consensus 4 ~is~e~v~~lt~~LV~~-~SvtgT~GE~a~ad~l~~vL~~~pYFqehpe-----d~~~~p-----i~-------nDpy-g 64 (553)
T COG4187 4 RISSERVRALTLSLVSW-PSVTGTPGEGAFADRLLGVLGELPYFQEHPE-----DLWLQP-----IH-------NDPY-G 64 (553)
T ss_pred hhhHHHHHHHHHHHeec-cccCCCcccccHHHHHHHHHhcCchhhhChH-----hhcccC-----CC-------CCcc-c
Confidence 34678999999999984 7889999988889999999988752 12221 112111 11 1123 5
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCC------------------------------------------CCCCCC
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA------------------------------------------GEGAGD 199 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~------------------------------------------spGA~D 199 (923)
..||.+-++|+ ++++.|++.+|+|+|.. ++|+.|
T Consensus 65 R~nv~AlVrg~----~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~D 140 (553)
T COG4187 65 RRNVFALVRGG----TSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALD 140 (553)
T ss_pred cceeEEEEecC----CCCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchh
Confidence 68999999984 57789999999999964 499999
Q ss_pred ChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCC-----cCCceEEEEeecCcC
Q 002429 200 CSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-----STTIRVAVDLEAMGI 264 (923)
Q Consensus 200 d~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~-----~~~v~a~iNlD~~G~ 264 (923)
+++|.|+-|..++.+++. ...+.+|.|+.+.+||....|.+.-+...+. .-...++||+|.++.
T Consensus 141 MKsGlav~la~L~~fa~~-~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~ 209 (553)
T COG4187 141 MKSGLAVHLACLEEFAAR-TDRQGNLLFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSD 209 (553)
T ss_pred hhhhhHHHHHHHHHHhhC-CCCCCcEEEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccC
Confidence 999999999999999986 5677899999999999888887776543322 235789999998875
No 77
>PLN02693 IAA-amino acid hydrolase
Probab=98.59 E-value=7.3e-07 Score=104.17 Aligned_cols=122 Identities=15% Similarity=0.202 Sum_probs=90.5
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
++.+..++|-+ +|.-|.++.++.+||.++|+++|- +++... ...||++
T Consensus 48 ~~~~~r~~lh~---~PE~s~~E~~ta~~i~~~L~~~G~------~~~~~~-----------------------~~~~via 95 (437)
T PLN02693 48 WMVRIRRKIHE---NPELGYEEFETSKLIRSELDLIGI------KYRYPV-----------------------AITGIIG 95 (437)
T ss_pred HHHHHHHHHHh---CCCCCCchHHHHHHHHHHHHHCCC------eeEecC-----------------------CCcEEEE
Confidence 34444455544 445555667899999999999982 332110 2478999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccCCC-------------CC-CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 002429 168 RILPKYASEAGENAILVSSHIDTVSAG-------------EG-AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~~s-------------pG-A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~E 233 (923)
++.++ +.+.|++.+|+|+||.. .+ +.|.++++|++|.+++.|++.+...+.+|.|+|..+|
T Consensus 96 ~~g~~-----~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdE 170 (437)
T PLN02693 96 YIGTG-----EPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAE 170 (437)
T ss_pred EECCC-----CCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcc
Confidence 88321 24789999999999852 12 7788999999999999999866566789999999999
Q ss_pred CCCCcChHHHHhcC
Q 002429 234 EEGLNGAHSFVTQH 247 (923)
Q Consensus 234 E~gl~GS~~f~~~h 247 (923)
| +..|++.++++.
T Consensus 171 E-~~~Ga~~~i~~g 183 (437)
T PLN02693 171 E-GLSGAKKMREEG 183 (437)
T ss_pred c-chhhHHHHHHCC
Confidence 9 557999998543
No 78
>PLN02280 IAA-amino acid hydrolase
Probab=98.58 E-value=9.3e-07 Score=104.32 Aligned_cols=133 Identities=19% Similarity=0.252 Sum_probs=91.2
Q ss_pred HHHHHHHHc-CCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEE
Q 002429 90 MKHVKALTQ-LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (923)
Q Consensus 90 ~~~L~~L~~-igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~ 168 (923)
.+.|++|.+ +-.+|.-+.++.++.+||.++|+++|. +++.. . ...|++++
T Consensus 96 ~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~------~~~~~--~---------------------~~~~vva~ 146 (478)
T PLN02280 96 VAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGI------MYRYP--L---------------------AKTGIRAW 146 (478)
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCC------eEEec--C---------------------CCCEEEEE
Confidence 344455444 212333345567999999999999982 33321 0 24689999
Q ss_pred EcCCCCCCCCCCeEEEEeeccccCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 002429 169 ILPKYASEAGENAILVSSHIDTVSAGE-----------G---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (923)
Q Consensus 169 i~g~~~~~~~~~~vll~aH~DSv~~sp-----------G---A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE 234 (923)
+ |+ ..++.|++++|+|+||... | +.|..+++|++|.+++.|.+.+.+++.+|+|+|..+||
T Consensus 147 ~-g~----~~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE 221 (478)
T PLN02280 147 I-GT----GGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEE 221 (478)
T ss_pred E-CC----CCCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEeccccc
Confidence 8 43 1237899999999998521 1 23345599999999999987666778899999999999
Q ss_pred CCCcChHHHHhcCCCcCCceEEEE
Q 002429 235 EGLNGAHSFVTQHPWSTTIRVAVD 258 (923)
Q Consensus 235 ~gl~GS~~f~~~h~~~~~v~a~iN 258 (923)
.| .|++.++++ ...+++.+++-
T Consensus 222 ~g-~Ga~~li~~-g~~~~~d~~~~ 243 (478)
T PLN02280 222 AG-NGAKRMIGD-GALDDVEAIFA 243 (478)
T ss_pred cc-chHHHHHHC-CCCcCCCEEEE
Confidence 97 499999854 33333444443
No 79
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=98.34 E-value=3.7e-06 Score=90.80 Aligned_cols=175 Identities=18% Similarity=0.219 Sum_probs=127.6
Q ss_pred CCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCC-cCCceEE
Q 002429 178 GENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVA 256 (923)
Q Consensus 178 ~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~ 256 (923)
.++-||+++|..+-. =|+||-+|+|.+.-+++.|+.. +.+.+-+|+|.. +..||-.|..+|.. .++++.-
T Consensus 177 ~~~eiLlst~lCHPS---maNdn~SG~all~~lak~l~~~--ktrysYRfvf~P----~TiGsi~wLsrnee~lkhvk~G 247 (435)
T COG4310 177 SKDEILLSTYLCHPS---MANDNLSGLALLTFLAKALKSL--KTRYSYRFVFAP----ETIGSIVWLSRNEECLKHVKHG 247 (435)
T ss_pred ccceeeeeecccChh---hccCccchHHHHHHHHHHHHhc--cceeeEEEEecc----cccchhhhHhcchhHHhhhhcc
Confidence 566799999999864 7999999999999999999874 478899999987 36899999988876 4799999
Q ss_pred EEeecCcCCCCcceeecCCCHHHHHHHHH-HhcCCCCcccccccccCCCCCCCCchHHhhhc-CCCeE--EEEeecCCCC
Q 002429 257 VDLEAMGIGGRSALFQAGPNLWAVENFAA-VAKYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSG--LDFAYTDKSA 332 (923)
Q Consensus 257 iNlD~~G~gG~~~lfq~g~~~~li~~y~~-~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPg--ld~a~~~~~~ 332 (923)
+.+-+.|.||....-++--...+++..+. .-+|-. +.. +++ .++|.++|-+.|..- .++|. +.-.-++..+
T Consensus 248 lVlsClGD~g~~nykrtrrgna~iDki~~~tl~~~~-s~~--~~~--dF~p~G~DERQf~sPg~NLpvg~~~Rs~yG~f~ 322 (435)
T COG4310 248 LVLSCLGDGGGPNYKRTRRGNALIDKIALHTLKHCG-SNF--KAA--DFLPYGSDERQFCSPGFNLPVGGLQRSRYGDFD 322 (435)
T ss_pred eEEEEecCCCCccceeccccchHHHHHHHHHHhcCC-cCc--eee--ecccCCCchhhccCCCcCCchhhhhHhhcCCCc
Confidence 99999998776665554333345554433 223322 111 122 257889999999751 12222 2222345556
Q ss_pred CCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 333 VYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 333 ~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
-|||..|+++.|+++.|...-+.++.++..+-+.
T Consensus 323 ~YHtSaDnL~fi~~e~L~~s~~~~memI~~lE~N 356 (435)
T COG4310 323 GYHTSADNLDFISPEGLAGSFQMMMEMILNLEIN 356 (435)
T ss_pred cccCccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999998888777888888777654
No 80
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.12 E-value=9.1e-06 Score=90.10 Aligned_cols=133 Identities=23% Similarity=0.289 Sum_probs=83.7
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC------cCC-----
Q 002429 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM------GIG----- 265 (923)
Q Consensus 197 A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~------G~g----- 265 (923)
|-||..||++++|++|.|++. ..+.+++|+|+..||.|+.||+..+.+. +...+|.+|.. |..
T Consensus 132 alDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~i----~PD~ai~vD~~~a~d~~~~~~~~~~ 205 (292)
T PF05343_consen 132 ALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFRI----KPDIAIAVDVTPAGDTPGSDEKEQG 205 (292)
T ss_dssp THHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHHH-----CSEEEEEEEEEESSSTTSTTTTSC
T ss_pred eCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeeccccc----CCCEEEEEeeeccCCCCCCchhhcc
Confidence 779999999999999999874 4559999999999999999999877441 23445555533 221
Q ss_pred ---CCcc-eeecCC--CHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcC
Q 002429 266 ---GRSA-LFQAGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKN 338 (923)
Q Consensus 266 ---G~~~-lfq~g~--~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~ 338 (923)
|+.+ ++..++ ++.+.+...+.++. .+-....+.+. ..+||-..+.. -.|+|...++.-- .+.||+.
T Consensus 206 lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~-~~Ip~Q~~~~~----~ggTDa~~~~~~~~Gi~t~~i~iP~--ry~Hs~~ 278 (292)
T PF05343_consen 206 LGKGPVIRVGDSSMIPNPKLVDKLREIAEE-NGIPYQREVFS----GGGTDAGAIQLSGGGIPTAVISIPC--RYMHSPV 278 (292)
T ss_dssp TTS-EEEEEEETTEESHHHHHHHHHHHHHH-TT--EEEEEES----SSSSTHHHHHTSTTSSEEEEEEEEE--BSTTSTT
T ss_pred CCCCcEEEEccCCCCCCHHHHHHHHHHHHH-cCCCeEEEecC----CcccHHHHHHHcCCCCCEEEEeccc--ccCCCcc
Confidence 2333 222222 56676666655431 11111122332 34788888764 2699999886432 2369876
Q ss_pred CCcC
Q 002429 339 DRLD 342 (923)
Q Consensus 339 Dt~d 342 (923)
-+.+
T Consensus 279 e~~~ 282 (292)
T PF05343_consen 279 EVID 282 (292)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5544
No 81
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=98.07 E-value=2.9e-05 Score=86.97 Aligned_cols=141 Identities=19% Similarity=0.306 Sum_probs=100.7
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCH----HHHHHHHHHHHHHHhcccccCCcceEEE-EeeeccCCCccccccccccccccc
Q 002429 85 SELEAMKHVKALTQLGPHAVGSD----ALDRALQYVLAASQKIKESKHWEADVEV-DFFHAKSGANRVGTGVFKGKTLIY 159 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~----~n~~a~~yL~~~l~~i~~~~~~~~~ve~-d~~~~~~g~~~~~~~~~~~~~~~Y 159 (923)
..++..+.|++..+|.. ....+ .-.++.+|+.++++++|.. ++. |.=.++ ...| .+
T Consensus 14 ~~de~~~~L~e~v~iqs-vs~dp~~r~~v~rm~~~~~~~l~~lG~~------~~l~dlg~q~----~~~g--------~~ 74 (473)
T KOG2276|consen 14 NKDEFINTLREAVAIQS-VSADPTKRLEVRRMADWLRDYLTKLGAP------LELVDLGYQS----LPDG--------QI 74 (473)
T ss_pred cHHHHHHHHHHHhcccc-cccCccccHHHHHHHHHHHHHHHHhCCc------eeeeecccCC----CCCC--------cc
Confidence 45678889999988743 33323 3358999999999999932 221 110000 0111 01
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 002429 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (923)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~ 218 (923)
....-++--..|+ +++++.+++-.|||..|. ++|++||+.-|+.-.++++++.+.|
T Consensus 75 v~lPpvvl~~~Gs---dp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g 151 (473)
T KOG2276|consen 75 VPLPPVVLGVLGS---DPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLG 151 (473)
T ss_pred cccChhhhhcccC---CCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhC
Confidence 1111122222343 577899999999999985 4999999999999999999999999
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhcC
Q 002429 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQH 247 (923)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~h 247 (923)
..++.+|+|+|-+-||.|..|-...+++.
T Consensus 152 ~~lpvnv~f~~EgmEEsgS~~L~~l~~~~ 180 (473)
T KOG2276|consen 152 IDLPVNVVFVFEGMEESGSEGLDELIEKE 180 (473)
T ss_pred ccccceEEEEEEechhccCccHHHHHHHH
Confidence 89999999999999999999888877543
No 82
>KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones]
Probab=97.25 E-value=0.0023 Score=73.91 Aligned_cols=188 Identities=13% Similarity=0.161 Sum_probs=121.3
Q ss_pred ccceEEEEEcCCCCC--CCC-CCeEEEEeeccccC----CCCCCCCChhHHHHHHHHHHHHHhcC--CCCCCcEEEEEeC
Q 002429 161 DLNHIVLRILPKYAS--EAG-ENAILVSSHIDTVS----AGEGAGDCSSCVAVMLELARVMSQWA--HEFKNAVIFLFNT 231 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~--~~~-~~~vll~aH~DSv~----~spGA~Dd~sgva~mLE~ar~L~~~~--~~p~~~I~flf~~ 231 (923)
+..||..-+++-..+ .++ .++++..+-+|+.. .++||.---.+.+..|.++|.|++.+ ...+++|.|+|+.
T Consensus 156 ~~ynvws~l~pi~ts~tnk~~~~vvv~tarmdsrsfF~n~s~Ga~S~~~slv~~laaa~al~r~pai~nl~rnV~f~~f~ 235 (596)
T KOG2657|consen 156 HSYNVWSFLTPIPTSPTNKTISKVVVVTARMDSRSFFPNISVGAVSVLTSLVSVLAAARALKRQPAINNLNRNVFFAFFN 235 (596)
T ss_pred CCccceeccCccccccccCcCcceeeeeeecccccccccccCCccccchhHHHHHHHHHHhccCcccccccceeEEEEee
Confidence 456676666543211 122 67899999999964 46898888999999999999998743 4578999999999
Q ss_pred CCCCCCcChHHHHhcCC-----Cc-CC---ceEEEEeecCcC--CCCcceeecCC-C----HH---HHHHHHHHh-cCCC
Q 002429 232 GEEEGLNGAHSFVTQHP-----WS-TT---IRVAVDLEAMGI--GGRSALFQAGP-N----LW---AVENFAAVA-KYPS 291 (923)
Q Consensus 232 ~EE~gl~GS~~f~~~h~-----~~-~~---v~a~iNlD~~G~--gG~~~lfq~g~-~----~~---li~~y~~~a-~~p~ 291 (923)
+|-.+.+||.+++-+.. .+ ++ +..++.+-.+|- +++-.++..+- . .. .++.+++.. .|++
T Consensus 236 get~~ylgS~r~~yeme~gk~pva~~s~~~iD~~LEiGqvg~~~s~kl~~~~d~~~~~sv~nqtld~L~~~ekSlrs~~f 315 (596)
T KOG2657|consen 236 GETLDYLGSGRAAYEMENGKFPVAIRSDNEIDYILEIGQVGVAKSRKLYVHVDGERYQSVKNQTLDVLDRIEKSLRSHAF 315 (596)
T ss_pred cceeeeccchhhhhHhhcCCCCeeeccCccchheeeecccccccCceEEEEeccchhhhHHHHHHHHHHHHHhcccccCe
Confidence 99999999998775432 21 33 666666666664 23333444221 1 11 223333321 1333
Q ss_pred CcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecC---CCCCCCCcCCCcCCCCHHHHH
Q 002429 292 GQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD---KSAVYHTKNDRLDLLKPGSLQ 350 (923)
Q Consensus 292 ~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~---~~~~YHT~~Dt~d~i~~~slq 350 (923)
. .+.++.- +.-+|..+=++..++..++.++-++-.+ ...+||+.+|+.|+|+...-.
T Consensus 316 ~-ll~~s~~-s~~lPPsSlqsFlR~dpn~saVvLad~~~~f~NKyYhSilDdaeNin~sy~~ 375 (596)
T KOG2657|consen 316 D-LLKPSGS-SDRLPPSSLQSFLRADPNVSAVVLADYGKEFENKYYHSILDDAENINDSYEK 375 (596)
T ss_pred e-eecCCCC-CCCCChHHHHHHHhhCCCcceEEeccCCchhhhhhhhhhhcchhhccchhhh
Confidence 2 1112211 2235655656555645789999998766 344699999999999976543
No 83
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=96.26 E-value=0.0089 Score=69.29 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=48.4
Q ss_pred CCChhHHHHHHHHHHHHHhcC-CCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEee
Q 002429 198 GDCSSCVAVMLELARVMSQWA-HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 198 ~Dd~sgva~mLE~ar~L~~~~-~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
.||++|.+.++++++.+.+.. .-+..+|.+.|+++||.|+.|++.|.-. .-.+....++|
T Consensus 143 aD~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a---~f~a~~ay~iD 203 (414)
T COG2195 143 ADDKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAANKDVA---RFLADFAYTLD 203 (414)
T ss_pred CcchhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhhhccHH---hhhcceeEecC
Confidence 488899999999999999653 4567799999999999999999988632 22456667777
No 84
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=96.14 E-value=0.23 Score=59.42 Aligned_cols=184 Identities=17% Similarity=0.211 Sum_probs=114.1
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcCh
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 240 (923)
+++|+.+.++.. ..++.+.+++.+-+++.. | .-|..|++.+|.++|.+++... ..++|+|++.++| ..|.
T Consensus 2 ~G~nvy~i~rap--R~d~tEaivl~~~~~~~~---~-~~n~~~v~l~lal~~~~~~~~~-wsKDii~l~~~~~---~~g~ 71 (504)
T PF04114_consen 2 SGTNVYGILRAP--RGDGTEAIVLVVPWRDSD---G-EYNAGGVALALALARYFRRQSY-WSKDIIFLFTDDE---LAGM 71 (504)
T ss_pred CceEEEEEEecC--CCCCceeEEEEEecCCCC---c-ccchhhHHHHHHHHHHhhhchh-hhccEEEEecCCc---chHH
Confidence 468999888754 246778999999988653 3 4459999999999999998643 5799999999865 4688
Q ss_pred HHHHhcCCC--------------cCCceEEEEeecCcCCCCcc-eeecC-----CCHHHHHHHHHHhcCC---CCccc--
Q 002429 241 HSFVTQHPW--------------STTIRVAVDLEAMGIGGRSA-LFQAG-----PNLWAVENFAAVAKYP---SGQII-- 295 (923)
Q Consensus 241 ~~f~~~h~~--------------~~~v~a~iNlD~~G~gG~~~-lfq~g-----~~~~li~~y~~~a~~p---~~~~l-- 295 (923)
++|++++-. +..+++.+|+|-.+.....+ +.-.| ||..++....+.+.+. .+...
T Consensus 72 ~awl~~Yh~~~~~~~~~~~l~~~~G~i~aAl~le~~~~~~~~v~i~~eG~NGqLPNLDL~N~~~~i~~~~gi~~~~~~~~ 151 (504)
T PF04114_consen 72 QAWLEAYHDSNTKGLSSSPLPLRAGSIQAALVLEYPSDSFSSVEIKYEGLNGQLPNLDLVNTVVRIAEKEGIPMGVSLHL 151 (504)
T ss_pred HHHHHHHhCCCCccccccCCCCCCcceeEEEEEEecCCCccEEEEEEecCCCCCCCchHHHHHHHHHHhcCCCccccccc
Confidence 898875411 23589999999887654443 22223 3444555443332211 10000
Q ss_pred ------ccc------------cccCCCCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHH
Q 002429 296 ------GQD------------LFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENML 357 (923)
Q Consensus 296 ------~~e------------~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl 357 (923)
..+ +.+.+.-....+|..|.+ .+|.++.+.-... ..+. .....+.|+.+.
T Consensus 152 ~~~~~~~~~~~~~~l~~l~~~~~~~a~g~p~g~H~~f~~-y~I~aiTl~~~~~------~~~~-----~~~~~~~gr~~E 219 (504)
T PF04114_consen 152 QPSDWHSNSDYESRLKTLLRGMLNQALGGPTGPHGAFLR-YRIDAITLRGVKS------TGPG-----PHDFTAFGRILE 219 (504)
T ss_pred cccccccccchHHHHHHHHHHHHHhccCCCCCCchhhhh-cCccEEEEecccC------CCCC-----CcCHHHHHHHHH
Confidence 000 001111112467889998 7899998822111 1111 112457788888
Q ss_pred HHHHHHhcC
Q 002429 358 DFLLQTASS 366 (923)
Q Consensus 358 ~lv~~la~a 366 (923)
..+|.+-|-
T Consensus 220 ~~~RslNNL 228 (504)
T PF04114_consen 220 GIFRSLNNL 228 (504)
T ss_pred HHHHHHHHH
Confidence 888888764
No 85
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=96.00 E-value=0.13 Score=59.55 Aligned_cols=127 Identities=17% Similarity=0.256 Sum_probs=90.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCC
Q 002429 99 LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAG 178 (923)
Q Consensus 99 igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~ 178 (923)
+--+|-=+-++.++.+||.+.|++++- + .++. + + ..+-|++.++|. .+
T Consensus 21 lH~~PEL~f~E~~Ta~~i~~~L~~~g~------~-~~~~-----~-----~-----------~~TGvva~~~~g----~~ 68 (392)
T COG1473 21 LHEHPELGFEEYRTAAYIAEKLEELGF------E-VVEV-----G-----G-----------GKTGVVATLKGG----KP 68 (392)
T ss_pred HhhCCccchhHHHHHHHHHHHHHHcCC------e-eEec-----c-----C-----------CceEEEEEEcCC----CC
Confidence 434556666778999999999999983 2 1111 0 0 124589999864 34
Q ss_pred CCeEEEEeeccccCC-----------CCC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHH
Q 002429 179 ENAILVSSHIDTVSA-----------GEG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSF 243 (923)
Q Consensus 179 ~~~vll~aH~DSv~~-----------spG----A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f 243 (923)
.+.|.+-|-||-.|. .+| -+-| .-.+++|-+++.|++....++.+|+|+|-.+||.+- |++.+
T Consensus 69 g~tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD-~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~-Ga~~m 146 (392)
T COG1473 69 GPTIALRADMDALPIQEETGLPFASKNPGVMHACGHD-GHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG-GAKAM 146 (392)
T ss_pred CCEEEEEeecccCccccccCCCcccCCCCCcccCCch-HHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc-cHHHH
Confidence 458999999999984 244 2223 335788999999998766789999999999999876 99999
Q ss_pred HhcCCCcCC-ceEEEEee
Q 002429 244 VTQHPWSTT-IRVAVDLE 260 (923)
Q Consensus 244 ~~~h~~~~~-v~a~iNlD 260 (923)
+++ -..++ +.+++-+.
T Consensus 147 i~~-G~~~~~vD~v~g~H 163 (392)
T COG1473 147 IED-GVFDDFVDAVFGLH 163 (392)
T ss_pred Hhc-CCccccccEEEEec
Confidence 954 33344 77766665
No 86
>PRK02813 putative aminopeptidase 2; Provisional
Probab=91.35 E-value=0.73 Score=54.18 Aligned_cols=141 Identities=13% Similarity=0.098 Sum_probs=83.7
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc---ChHH-----------HHhcCC-----CcCCceE
Q 002429 195 EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN---GAHS-----------FVTQHP-----WSTTIRV 255 (923)
Q Consensus 195 pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~---GS~~-----------f~~~h~-----~~~~v~a 255 (923)
-++-||-+||.+++|+++.+.. +.++++++++-||.|.. ||+. -..... ..-.-..
T Consensus 230 s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s~~l~~~l~ri~~~~~~~~~~~~~~i~~s~ 304 (428)
T PRK02813 230 SGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADSPFLEDVLERIVLALGGDREDFLRALARSF 304 (428)
T ss_pred EecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCchhHHHHHHHHHHhhcCchHHHHHhhCCCe
Confidence 4788999999999999987532 67999999999999998 7774 110000 1123356
Q ss_pred EEEeecCcCC------------------CCcceee-c-C--CCHHHHHHHHHHh---cCCCCcccccccccCCCCCCCCc
Q 002429 256 AVDLEAMGIG------------------GRSALFQ-A-G--PNLWAVENFAAVA---KYPSGQIIGQDLFASGVFETATD 310 (923)
Q Consensus 256 ~iNlD~~G~g------------------G~~~lfq-~-g--~~~~li~~y~~~a---~~p~~~~l~~e~f~~g~ips~TD 310 (923)
+|.+|++-+. |..+-.. . + +++.....+++.+ .-|. |.....+..|++||
T Consensus 305 ~IS~DvahA~hPn~~~~~~~~~~~~lg~GpvIk~~~~~~y~t~~~~~a~~~~ia~~~~Ip~-----Q~~v~~~d~~gGst 379 (428)
T PRK02813 305 LISADMAHAVHPNYPEKHDPTHRPLLNKGPVIKINANQRYATDAESAAVFKLLCEKAGVPY-----QEFVNRSDMPCGST 379 (428)
T ss_pred EEEEeccCCCCCCCCCccCcccCccCCcCCeEEECCCCCcccCHHHHHHHHHHHHHcCCCE-----EEEEecCCCCCccH
Confidence 6777755332 2222111 0 1 2444444444332 2232 22122334667899
Q ss_pred hHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHH
Q 002429 311 FQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPG 347 (923)
Q Consensus 311 ~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~ 347 (923)
-.++.. ..|+|.+|+.--- -.-|++..+...-|..
T Consensus 380 ig~i~~s~~Gi~tvdiGiP~--l~MHS~~E~~~~~D~~ 415 (428)
T PRK02813 380 IGPITAARLGIRTVDVGAPM--LAMHSARELAGVKDHA 415 (428)
T ss_pred HHHHHHhCCCCcEEEeChhh--cccccHHHHccHHHHH
Confidence 888864 4799999985321 1259988776654443
No 87
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=89.57 E-value=2.7 Score=50.02 Aligned_cols=152 Identities=12% Similarity=0.045 Sum_probs=87.5
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC-CCCCCcEEEEEeCCCCCCCcChHHHHhcC-CC-------cCCce-----------
Q 002429 195 EGAGDCSSCVAVMLELARVMSQWA-HEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-------STTIR----------- 254 (923)
Q Consensus 195 pGA~Dd~sgva~mLE~ar~L~~~~-~~p~~~I~flf~~~EE~gl~GS~~f~~~h-~~-------~~~v~----------- 254 (923)
-++-||-.||.+++|+++.+.... ..+....++++++-||.|..|+++-.... +. +.+..
T Consensus 247 s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs~ga~GA~s~~l~d~l~ri~~~~~~~~~~~~~~~~~~ 326 (465)
T PTZ00371 247 SPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGSSSSQGAGSSLLPDTIERILSSLSASNNSSDDSFAKL 326 (465)
T ss_pred EecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCCCcchhccccccHHHHHHHHHhhccccccchhHHHHH
Confidence 478899999999999999765310 11344555566999999998887743211 11 01111
Q ss_pred ----EEEEeecCcC------------------CCCcceee----cCCCHHHHHHHHHHhcCCCCcccccccccCCCCCCC
Q 002429 255 ----VAVDLEAMGI------------------GGRSALFQ----AGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETA 308 (923)
Q Consensus 255 ----a~iNlD~~G~------------------gG~~~lfq----~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~ 308 (923)
.+|..|++-+ +|..+-+. ..+++.+...+++.++. .+ +-.|.....+..|++
T Consensus 327 ~~~S~~IS~DvahA~hPn~~~~~d~~~~~~lg~GpvIk~~a~~~y~td~~~~a~i~~la~~-~~-Ip~Q~~~~~~d~~~G 404 (465)
T PTZ00371 327 MARSFLLSVDMAHAVHPNYPEKHQANHRPKFHEGIVIKYNANQRYATNGVTASLLKAIAKK-AN-IPIQEFVVKNDSPCG 404 (465)
T ss_pred HhccEEEEEecccccCCCCccccCCcCceeCCCCcEEEEeCCCCcccCHHHHHHHHHHHHH-cC-CCEEEEEecCCCCCc
Confidence 7788886533 12322222 11255555555544321 11 111222223346778
Q ss_pred CchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHH
Q 002429 309 TDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQ 350 (923)
Q Consensus 309 TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq 350 (923)
||-.++.. ..|+|.+|+.--- -.-|++..+...-|...+-
T Consensus 405 sTig~i~~s~~Gi~tvDiGiP~--l~MHS~rE~~~~~D~~~~~ 445 (465)
T PTZ00371 405 STIGPILSSNLGIRTVDIGIPQ--LAMHSIREMCGVVDIYYLV 445 (465)
T ss_pred chHHHHHHhCCCCcEEEechhh--cccccHHHHccHHHHHHHH
Confidence 89888865 4899999985321 2259988777665554333
No 88
>PRK02256 putative aminopeptidase 1; Provisional
Probab=81.03 E-value=2.2 Score=50.66 Aligned_cols=57 Identities=19% Similarity=0.167 Sum_probs=43.6
Q ss_pred EEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHH
Q 002429 182 ILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFV 244 (923)
Q Consensus 182 vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~ 244 (923)
-+++.+-|=+ +-++-||-.||.+++|+++.+. .++..+++++++-||.|+.|++.-.
T Consensus 245 ~~~G~~~efI--~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~gA~ 301 (462)
T PRK02256 245 RDVGLDRSLI--GAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNTGAQ 301 (462)
T ss_pred ceecccccee--eccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchhhhc
Confidence 3444444433 3688999999999999998654 3567999999999999998777643
No 89
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=62.35 E-value=29 Score=41.96 Aligned_cols=76 Identities=22% Similarity=0.400 Sum_probs=58.8
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcCh
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 240 (923)
++.||.+.+++. ..++.+.+++..-|+.-. |. |-.|++.++..++.++++. -..++|+|++++++ ..|-
T Consensus 119 ~G~NvyGilRAP--RgdgtEsivl~vP~~~~~---~~--~~~~v~l~lsla~~f~r~~-yWsKDII~v~~d~~---~~g~ 187 (617)
T KOG3566|consen 119 SGENVYGILRAP--RGDGTESIVLVVPYGRSS---GS--NSASVALLLSLADYFSRWV-YWSKDIIFVFTDGP---ALGL 187 (617)
T ss_pred CCceEEEEEecC--CCCCcceEEEEEecccCC---Cc--chhHHHHHHHHHHHhcCCe-eecccEEEEEeCCc---cccH
Confidence 478999999764 245678899998888653 33 4788999999999998753 35789999999884 5677
Q ss_pred HHHHhcC
Q 002429 241 HSFVTQH 247 (923)
Q Consensus 241 ~~f~~~h 247 (923)
.+|.+++
T Consensus 188 ~AwLeaY 194 (617)
T KOG3566|consen 188 DAWLEAY 194 (617)
T ss_pred HHHHHHh
Confidence 7887653
No 90
>PRK08126 hypothetical protein; Provisional
Probab=52.90 E-value=3.4e+02 Score=32.25 Aligned_cols=53 Identities=8% Similarity=0.042 Sum_probs=33.4
Q ss_pred eEEEEeeccccCCCCCC--CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 002429 181 AILVSSHIDTVSAGEGA--GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (923)
Q Consensus 181 ~vll~aH~DSv~~spGA--~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE 234 (923)
.|.+.+|.|+.|...|. ....-+.+=.-.+.+.|.+.|..+ ..|...-.++.+
T Consensus 355 ~I~V~GHTD~~p~~s~~~~~N~~LS~~RA~aV~~~L~~~Gv~~-~ri~~~G~G~~~ 409 (432)
T PRK08126 355 KVTVTGHTDNQPIRSAQFASNLVLSEKRAAQVAQMLQSAGVPA-SRLEAVGKGDAQ 409 (432)
T ss_pred eEEEEEecCCCCccCCccchHHHHHHHHHHHHHHHHHHcCCCH-HHeEEEEecCcC
Confidence 69999999999864443 334555566667777777766543 345554444433
No 91
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=47.93 E-value=6.1 Score=43.44 Aligned_cols=7 Identities=0% Similarity=0.416 Sum_probs=0.0
Q ss_pred ceEEEEe
Q 002429 394 KYMVLYH 400 (923)
Q Consensus 394 ~~~v~y~ 400 (923)
||||..|
T Consensus 39 w~~iims 45 (381)
T PF05297_consen 39 WFFIIMS 45 (381)
T ss_dssp -------
T ss_pred HHHHHHh
Confidence 3344333
No 92
>PF10190 Tmemb_170: Putative transmembrane protein 170; InterPro: IPR019334 This entry represents a group of putative transmembrane proteins conserved from nematodes to humans. The protein is only approximately 130 amino acids in length. The function is unknown.
Probab=41.24 E-value=2.2e+02 Score=27.29 Aligned_cols=49 Identities=10% Similarity=-0.019 Sum_probs=34.4
Q ss_pred HHhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccee
Q 002429 421 ASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYV 470 (923)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vA~~~~~~~~~~~sw~ 470 (923)
..+++.+.....++.....+.+.....+...+.++|.++.+. +..|+++
T Consensus 32 ~~lRkhk~~~f~pi~~l~mg~l~p~~~G~itSa~IA~vY~a~-~~~M~~~ 80 (105)
T PF10190_consen 32 FTLRKHKFGRFIPIVILLMGVLGPLTGGSITSAAIAGVYRAA-GFRMSTW 80 (105)
T ss_pred HHHhhccchhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHc-CCcccHH
Confidence 344444444456666666667777888888899999988854 6788875
No 93
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=30.02 E-value=1.1e+02 Score=35.21 Aligned_cols=56 Identities=11% Similarity=0.199 Sum_probs=43.6
Q ss_pred CCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
...||...|.+ .|+|.+.+... +...-|++. |+++.+.+....+....++.+|++.
T Consensus 338 ~g~tD~~~~~~-~gip~v~~Gpg-~~~~~H~~~---E~i~~~~l~~~~~i~~~~i~~l~~~ 393 (394)
T PRK08651 338 LGGTDARFFGA-KGIPTVVYGPG-ELELAHAPD---EYVEVKDVEKAAKVYEEVLKRLAKG 393 (394)
T ss_pred cCcccHHHHhh-CCCcEEEECCC-ChHhcCCCC---ceeEHHHHHHHHHHHHHHHHHhhcC
Confidence 46799999987 89999765332 223467755 7889999999999999999999764
No 94
>PRK07033 hypothetical protein; Provisional
Probab=29.21 E-value=1e+03 Score=28.24 Aligned_cols=54 Identities=11% Similarity=0.057 Sum_probs=34.8
Q ss_pred CeEEEEeeccccCCCCC--CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 002429 180 NAILVSSHIDTVSAGEG--AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (923)
Q Consensus 180 ~~vll~aH~DSv~~spG--A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE 234 (923)
..|.+.+|-|+.+...+ .....-+.+=.-.+.+.|.+.|..+++ |.....++.+
T Consensus 345 ~~I~V~GHTD~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi~~~r-i~~~G~G~~~ 400 (427)
T PRK07033 345 GNVLVTGYSDNVPIRTARFPSNWELSQARAQAVRALLAARLGQPER-VTAEGRGDSD 400 (427)
T ss_pred CeEEEEEEeCCCCccccccchHHHHHHHHHHHHHHHHHHcCCCcce-EEEEEECCCC
Confidence 46999999999975333 234455666677788888877655443 5555444433
No 95
>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi. Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.
Probab=27.87 E-value=1e+03 Score=28.26 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=22.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHhhccc
Q 002429 585 LATLLLGLAVPVLVSAGNIIRLANVLVATLVR 616 (923)
Q Consensus 585 ~~~~~~~~~~P~~~~~~l~~~~~~~~~p~~gR 616 (923)
...+.-.++.|+++...+....-.++.|.++|
T Consensus 187 ~~~l~~~ll~P~~ig~ai~~~vslliFP~sss 218 (459)
T PF10337_consen 187 AYTLGKTLLKPFLIGIAIALVVSLLIFPESSS 218 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeecCCCch
Confidence 34444556788888777777666777787776
No 96
>PRK07522 acetylornithine deacetylase; Provisional
Probab=26.99 E-value=1.6e+02 Score=33.47 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHH
Q 002429 276 NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGEN 355 (923)
Q Consensus 276 ~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~ 355 (923)
+..+++.++++...+.. ...+..||-..|.. .|+|.+.+.... ....||+. |+++.+.+....+.
T Consensus 311 ~~~~v~~~~~~~~~~~~----------~~~~~~td~~~~~~-~gip~v~~Gpg~-~~~~H~~~---E~i~i~~l~~~~~~ 375 (385)
T PRK07522 311 DAAAARLVRALTGDNDL----------RKVAYGTEAGLFQR-AGIPTVVCGPGS-IEQAHKPD---EFVELAQLAACEAF 375 (385)
T ss_pred CcHHHHHHHHHhCCCCc----------ceEeeecchHHhcc-CCCCEEEECCCC-hhhCCCCC---ccccHHHHHHHHHH
Confidence 34577777665333211 01234699999986 899997654322 23678855 78999999999999
Q ss_pred HHHHHHHHh
Q 002429 356 MLDFLLQTA 364 (923)
Q Consensus 356 vl~lv~~la 364 (923)
+..++..+|
T Consensus 376 ~~~~~~~~~ 384 (385)
T PRK07522 376 LRRLLASLA 384 (385)
T ss_pred HHHHHHHHh
Confidence 999988876
No 97
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=26.14 E-value=74 Score=26.08 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=21.6
Q ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHhcCCCCCCCc
Q 002429 651 YVHLSGAKGPIAFASFILVGLSIIMVSSGIIPPFSE 686 (923)
Q Consensus 651 li~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~Pf~~ 686 (923)
...+++|.|.-+.++.++.++.++.+..+...||++
T Consensus 8 ~~~~f~~nk~a~~gl~il~~~vl~ai~~p~~~p~~~ 43 (56)
T PF12911_consen 8 AWRRFRRNKLAVIGLIILLILVLLAIFAPFISPYDP 43 (56)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 345677666666666555555555555566678853
No 98
>PF07466 DUF1517: Protein of unknown function (DUF1517); InterPro: IPR010903 This family consists of several hypothetical glycine rich plant and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=26.11 E-value=9.7e+02 Score=26.94 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCc
Q 002429 205 AVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWS 250 (923)
Q Consensus 205 a~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~ 250 (923)
..+=|+++.|......--..+.+++...+|.-.+-...++.++|..
T Consensus 241 ~~l~~aL~~l~~~~~~~l~a~evlWtP~~~gd~Ls~~ell~~yP~L 286 (289)
T PF07466_consen 241 EDLREALRKLGSISSDRLLAVEVLWTPQAEGDTLSEDELLADYPDL 286 (289)
T ss_pred HHHHHHHHHHhCCChhheeeEEEEECCCCCCCccCHHHHHHhCccc
Confidence 4566777777643222235789999999999988888888888764
No 99
>PF09971 DUF2206: Predicted membrane protein (DUF2206); InterPro: IPR018701 This family of predicted membrane proteins from archaea has no known function.
Probab=25.91 E-value=1.1e+03 Score=27.49 Aligned_cols=23 Identities=9% Similarity=-0.076 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCchh
Q 002429 638 AVVSCLTLVYLLSYVHLSGAKGP 660 (923)
Q Consensus 638 a~~t~l~~~~l~Pli~~~~~~~~ 660 (923)
++..+...|++..+..+.+++..
T Consensus 123 ~~~~~i~IG~l~~~~~~~~~k~~ 145 (367)
T PF09971_consen 123 FIQFFIIIGFLALILKRIYKKIK 145 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 33556677888888888765533
No 100
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=24.86 E-value=88 Score=28.89 Aligned_cols=11 Identities=27% Similarity=0.286 Sum_probs=5.7
Q ss_pred Hhhheeecccc
Q 002429 59 SYGVYYYQYEH 69 (923)
Q Consensus 59 ~~~v~~~~~~~ 69 (923)
.|+++.|....
T Consensus 46 ~WiVvyYi~~~ 56 (87)
T PF06781_consen 46 LWIVVYYISGG 56 (87)
T ss_pred HHHhhhhcccC
Confidence 55555555543
No 101
>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms]
Probab=24.15 E-value=2e+03 Score=29.95 Aligned_cols=47 Identities=21% Similarity=0.224 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCcceecchhHHHHHhHHHHHHHHHHHHH
Q 002429 444 MLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQH 493 (923)
Q Consensus 444 ~~~~~~~~~~~vA~~~~~~~~~~~sw~s~~~l~~gLy~~p~~~g~~~~~~ 493 (923)
++-+++...++||++++.-.+.+ .=.++ +.-+|+....++.++++++
T Consensus 2261 sFn~av~iN~lVAffYPf~~~~~-g~ls~--l~sll~W~av~~s~~i~~~ 2307 (2706)
T KOG3533|consen 2261 SFNLAVIINALVAFFYPFPEHSN-GSLSS--LGSLLSWFAVFISFLIAHY 2307 (2706)
T ss_pred hhhHHHHHHHHHHhccCCCCCCC-cchhh--HHHHHHHHHHHHHHHHHHH
Confidence 55678888999999998543322 11111 3345555556666655543
No 102
>PF05656 DUF805: Protein of unknown function (DUF805); InterPro: IPR008523 This entry is represented by Lactobacillus phage LBR48, DUF805. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; GO: 0016021 integral to membrane
Probab=23.91 E-value=5.8e+02 Score=23.99 Aligned_cols=11 Identities=9% Similarity=-0.061 Sum_probs=6.2
Q ss_pred HhcccccCCCc
Q 002429 572 ATLTPVRLTRP 582 (923)
Q Consensus 572 ~~~~~~~~~~~ 582 (923)
....+.||.+.
T Consensus 65 l~vRRlhD~G~ 75 (120)
T PF05656_consen 65 LTVRRLHDIGR 75 (120)
T ss_pred HHhhhhhcCCC
Confidence 34456677654
No 103
>PRK08596 acetylornithine deacetylase; Validated
Probab=22.44 E-value=1.6e+02 Score=34.28 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=44.8
Q ss_pred CCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
++.||...|.+ .|+|++.+.... ....|++. |+++.+.+....+.+..++.++...
T Consensus 363 ~g~tD~~~~~~-~gip~v~~Gpg~-~~~~H~~~---E~v~i~~~~~~~~~~~~~l~~~~~~ 418 (421)
T PRK08596 363 TTVTDGGWFAE-FGIPAVIYGPGT-LEEAHSVN---EKVEIEQLIEYTKVITAFIYEWCHT 418 (421)
T ss_pred eeecchhhhhh-cCCCEEEECCCc-ccccCCCC---ceEEHHHHHHHHHHHHHHHHHHhCC
Confidence 45789999987 899998766533 34578855 8899999999999999999888753
No 104
>PF05421 DUF751: Protein of unknown function (DUF751); InterPro: IPR008470 This family, Ycf33, contains several plant, cyanobacterial and algal chlorplast encoded proteins of unknown function. The family is exclusively found in phototrophic organisms and may therefore play a role in photosynthesis.
Probab=22.34 E-value=3.1e+02 Score=23.74 Aligned_cols=30 Identities=17% Similarity=0.012 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHH
Q 002429 636 VIAVVSCLTLVYLLSYVHLSGAKGPIAFAS 665 (923)
Q Consensus 636 l~a~~t~l~~~~l~Pli~~~~~~~~i~~~l 665 (923)
+++.+..+....+-|+..++|+|..-+...
T Consensus 12 ~is~~lG~~~~~~~pl~~llk~p~tai~~i 41 (61)
T PF05421_consen 12 FISVMLGLFLIIFEPLKPLLKNPVTAIALI 41 (61)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 344445566778899999999886555443
No 105
>PRK07338 hypothetical protein; Provisional
Probab=22.06 E-value=1.4e+02 Score=34.40 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=43.5
Q ss_pred CCCCCchHHhhhcCCCeEEE-EeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 305 FETATDFQVYTEVAGLSGLD-FAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 305 ips~TD~~~F~~~~GiPgld-~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
.+..||-..|.. .|+|.++ +... +...|++. |+++.+.+....+.+..++..++..
T Consensus 344 ~~g~tDa~~~~~-~giP~v~~~Gpg--~~~~H~~~---E~v~i~~l~~~~~~~~~~l~~~~~~ 400 (402)
T PRK07338 344 SGGVCDGNNLAA-AGLPVVDTLGVR--GGNIHSED---EFVILDSLVERAQLSALILMRLAQG 400 (402)
T ss_pred CCccchHHHHhh-cCCCeEeccCCC--CCCCCCcc---ceEehhhHHHHHHHHHHHHHHHhcC
Confidence 356799999987 7999996 3332 33468865 7899999999999999999888653
No 106
>PRK10726 hypothetical protein; Provisional
Probab=20.56 E-value=7.5e+02 Score=23.63 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCcceecchhHHHHHhHHHHHHHHH
Q 002429 444 MLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGAL 489 (923)
Q Consensus 444 ~~~~~~~~~~~vA~~~~~~~~~~~sw~s~~~l~~gLy~~p~~~g~~ 489 (923)
.|.+|+++|.++ |-+| -+.+.||-.|.++.+.
T Consensus 31 ~ywlA~aiPfl~-------------YG~n-TlfF~LYTWPFFLALm 62 (105)
T PRK10726 31 SWLLALAIPFLI-------------YGSN-TLFFFLYTWPFFLALM 62 (105)
T ss_pred HHHHHHHHHHHH-------------hccc-HHHHHHHHHHHHHHHh
Confidence 456676676653 1233 5668999999998753
No 107
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=20.14 E-value=1.8e+02 Score=33.62 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=43.3
Q ss_pred CCCCchHHhhhcCCCeEEEEeecCC-CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 002429 306 ETATDFQVYTEVAGLSGLDFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (923)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~-~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~ 365 (923)
++.||...|++ .|+|.+.+..... ....|++.. +++.+.+.+..+....++.++++
T Consensus 343 ~g~tDa~~~~~-~gip~v~fgp~~~~~~~aH~~dE---~i~i~~l~~~~~~~~~~l~~~~~ 399 (400)
T TIGR01880 343 PGSTDSRYIRA-AGVPALGFSPMNNTPVLLHDHNE---FLNEAVFLRGIEIYQTLISALAS 399 (400)
T ss_pred cCcchHHHHHh-CCCCeEEECCccCCcccccCCCC---ceEHHHHHHHHHHHHHHHHHhhc
Confidence 46799999987 8999976544322 235798654 78999999999999999998864
Done!