Query 002429
Match_columns 923
No_of_seqs 425 out of 2105
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 01:58:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 3.2E-39 1.1E-43 355.7 24.5 253 82-362 20-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 4.5E-35 1.6E-39 322.8 27.5 259 85-371 9-305 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 5E-35 1.7E-39 322.4 26.8 250 81-362 19-308 (309)
4 3gux_A Putative Zn-dependent e 100.0 2.6E-34 8.8E-39 317.2 26.4 249 82-362 22-312 (314)
5 4fai_A CG5976, isoform B; alph 100.0 2.7E-34 9.2E-39 319.4 24.4 252 85-362 36-321 (330)
6 3pb6_X Glutaminyl-peptide cycl 100.0 2.6E-33 8.9E-38 310.8 23.3 262 73-363 23-327 (330)
7 2afw_A Glutaminyl-peptide cycl 100.0 1.3E-31 4.4E-36 297.7 24.0 268 67-363 9-326 (329)
8 1tkj_A Aminopeptidase, SGAP; d 100.0 4.8E-31 1.6E-35 287.1 26.9 255 82-370 2-282 (284)
9 1rtq_A Bacterial leucyl aminop 100.0 2.5E-29 8.7E-34 275.3 23.8 260 82-370 15-293 (299)
10 3kas_A Transferrin receptor pr 100.0 1.8E-29 6E-34 301.2 17.5 209 160-373 264-491 (640)
11 3fed_A Glutamate carboxypeptid 99.9 2.3E-28 7.9E-33 294.2 13.4 209 159-372 309-553 (707)
12 3iib_A Peptidase M28; YP_92679 99.9 1.3E-26 4.5E-31 267.3 19.3 199 161-369 234-436 (444)
13 2ek8_A Aminopeptidase; metallo 99.9 3.4E-25 1.2E-29 253.8 19.6 198 162-372 203-408 (421)
14 3k9t_A Putative peptidase; str 99.8 6.2E-19 2.1E-23 197.3 21.5 178 169-367 174-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 1.3E-16 4.5E-21 171.8 18.9 232 87-365 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 9.6E-17 3.3E-21 172.7 16.4 232 87-365 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.6 3.6E-15 1.2E-19 153.5 16.4 134 83-246 6-161 (198)
18 1vhe_A Aminopeptidase/glucanas 99.6 1.2E-14 4.2E-19 163.6 19.4 225 88-366 8-355 (373)
19 1y0y_A FRV operon protein FRVX 99.6 1.6E-14 5.5E-19 161.3 17.8 220 89-365 8-350 (353)
20 2gre_A Deblocking aminopeptida 99.6 2E-14 6.8E-19 160.4 17.6 223 85-361 4-343 (349)
21 2wyr_A Cobalt-activated peptid 99.6 3.1E-14 1.1E-18 157.6 17.3 147 197-362 171-331 (332)
22 2fvg_A Endoglucanase; TM1049, 99.5 1.3E-13 4.6E-18 153.1 13.5 219 92-365 3-335 (340)
23 3n5f_A L-carbamoylase, N-carba 99.4 1.2E-12 4.1E-17 148.6 17.0 129 84-246 2-142 (408)
24 2zog_A Cytosolic non-specific 99.4 2.5E-12 8.5E-17 148.9 19.5 155 86-261 19-200 (479)
25 1cg2_A Carboxypeptidase G2; me 99.4 3.2E-12 1.1E-16 144.3 15.7 146 86-263 18-181 (393)
26 2pok_A Peptidase, M20/M25/M40 99.4 3.5E-12 1.2E-16 148.0 14.8 145 86-261 42-210 (481)
27 3ct9_A Acetylornithine deacety 99.3 1.2E-11 4E-16 138.2 16.1 135 86-262 10-164 (356)
28 3ife_A Peptidase T; metallopep 99.3 5.5E-12 1.9E-16 144.5 13.7 139 87-261 27-224 (434)
29 3dlj_A Beta-Ala-His dipeptidas 99.3 2.6E-11 8.8E-16 141.0 19.1 156 86-262 24-208 (485)
30 3pfo_A Putative acetylornithin 99.3 1.6E-11 5.3E-16 140.2 15.8 158 87-263 26-205 (433)
31 3gb0_A Peptidase T; NP_980509. 99.3 1.8E-11 6E-16 137.1 13.7 148 84-263 3-168 (373)
32 2v8h_A Beta-alanine synthase; 99.3 2.2E-11 7.4E-16 141.3 14.5 128 83-245 28-175 (474)
33 3tx8_A Succinyl-diaminopimelat 99.3 2.2E-11 7.6E-16 136.1 13.9 139 87-262 13-167 (369)
34 1z2l_A Allantoate amidohydrola 99.2 2.7E-11 9.4E-16 137.9 13.8 126 86-245 8-145 (423)
35 1vho_A Endoglucanase; structur 99.2 2.8E-10 9.6E-15 126.4 19.2 226 88-366 6-337 (346)
36 2rb7_A Peptidase, M20/M25/M40 99.2 4.4E-11 1.5E-15 133.9 12.5 138 86-261 5-164 (364)
37 1lfw_A PEPV; hydrolase, dipept 99.2 2.5E-10 8.6E-15 131.7 18.3 126 86-248 13-168 (470)
38 1vgy_A Succinyl-diaminopimelat 99.2 7.2E-11 2.4E-15 133.3 13.4 141 86-262 5-168 (393)
39 1fno_A Peptidase T; metallo pe 99.2 4.8E-11 1.6E-15 135.8 11.1 137 88-262 3-198 (417)
40 1ylo_A Hypothetical protein SF 99.2 2.4E-10 8.4E-15 126.8 16.5 217 91-364 7-337 (348)
41 3rza_A Tripeptidase; phosphory 99.2 8E-11 2.7E-15 133.1 12.4 151 82-262 19-188 (396)
42 3khx_A Putative dipeptidase sa 99.2 2E-10 7E-15 133.8 15.6 135 86-260 33-196 (492)
43 3pfe_A Succinyl-diaminopimelat 99.1 1.6E-10 5.3E-15 134.0 13.7 145 87-261 18-192 (472)
44 3kl9_A PEPA, glutamyl aminopep 99.1 7.5E-10 2.6E-14 124.0 18.7 224 88-364 4-345 (355)
45 3isz_A Succinyl-diaminopimelat 99.1 2.4E-10 8.1E-15 127.4 14.3 139 87-261 3-164 (377)
46 3mru_A Aminoacyl-histidine dip 99.1 1.7E-10 5.8E-15 134.5 12.3 140 82-262 9-175 (490)
47 1xmb_A IAA-amino acid hydrolas 99.1 1.2E-09 4.2E-14 124.4 16.8 135 87-260 28-176 (418)
48 3cpx_A Aminopeptidase, M42 fam 99.1 2E-10 6.9E-15 126.8 8.6 224 88-362 18-320 (321)
49 2f7v_A Aectylcitrulline deacet 99.1 5.8E-10 2E-14 124.8 12.4 130 86-262 8-160 (369)
50 2qyv_A XAA-His dipeptidase; YP 99.0 8.3E-10 2.8E-14 128.3 12.5 139 83-262 7-172 (487)
51 1ysj_A Protein YXEP; M20 famil 99.0 2.6E-09 8.7E-14 121.2 15.6 137 86-259 31-181 (404)
52 2vpu_A TET3, 354AA long hypoth 98.9 1.8E-08 6.3E-13 112.7 17.4 220 88-365 10-349 (354)
53 3ram_A HMRA protein; two-domai 98.9 5.1E-09 1.7E-13 118.6 12.3 141 86-262 15-158 (394)
54 3io1_A Aminobenzoyl-glutamate 98.7 2E-07 6.8E-12 107.2 16.0 159 86-260 13-209 (445)
55 3isx_A Endoglucanase; TM1050, 98.6 6.3E-07 2.2E-11 99.8 17.2 210 90-360 14-341 (343)
56 2wzn_A TET3, 354AA long hypoth 98.3 1.1E-05 3.8E-10 86.2 16.2 152 197-366 183-350 (354)
57 2ek8_A Aminopeptidase; metallo 92.4 0.14 4.9E-06 58.0 6.4 44 81-125 10-53 (421)
58 3iib_A Peptidase M28; YP_92679 91.9 0.17 5.8E-06 57.9 6.3 42 84-125 18-60 (444)
59 2glf_A Probable M18-family ami 90.7 0.61 2.1E-05 53.5 9.3 42 196-242 246-287 (450)
60 2ijz_A Probable M18-family ami 90.6 0.24 8.2E-06 56.6 5.8 141 194-346 230-411 (428)
61 3fed_A Glutamate carboxypeptid 82.2 1.6 5.6E-05 52.7 6.9 43 82-125 20-62 (707)
62 2glj_A Probable M18-family ami 75.8 0.83 2.8E-05 52.6 1.5 45 195-243 257-301 (461)
63 3kas_A Transferrin receptor pr 75.4 0.94 3.2E-05 54.2 1.8 43 84-126 15-59 (640)
64 1y7e_A Probable M18-family ami 72.7 0.59 2E-05 53.8 -0.8 45 196-243 252-296 (458)
65 3vat_A Dnpep, aspartyl aminope 53.8 4.9 0.00017 46.6 2.1 160 195-364 281-487 (496)
66 1q7l_B Aminoacylase-1; catalys 47.2 32 0.0011 29.6 5.9 58 305-366 23-81 (88)
67 2l8s_A Integrin alpha-1; trans 35.6 59 0.002 26.2 5.1 18 621-640 4-21 (54)
68 2lx0_A Membrane fusion protein 32.7 40 0.0014 23.3 3.1 18 631-648 7-24 (32)
69 2ijz_A Probable M18-family ami 25.8 29 0.00098 39.4 2.4 74 104-192 13-86 (428)
70 2glf_A Probable M18-family ami 24.1 93 0.0032 35.5 6.3 66 108-192 32-97 (450)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.2e-39 Score=355.71 Aligned_cols=253 Identities=19% Similarity=0.218 Sum_probs=197.6
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
++||++||+++|++++++|||++||++++++++||.++|++++ .+++.|.+.... . ...+.+
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g------~~v~~q~~~~~~---------~---~~~~~~ 81 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFG------AKVTNQYADLIA---------Y---DGTLLK 81 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------T---TSCEEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcC------CeeEEEeEEecc---------C---CCCcce
Confidence 5899999999999999999999999999999999999999998 456666655321 0 112236
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s-------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~fl 228 (923)
..|||++++|+ .++.|+|+|||||++.+ +||+||++|||+|||++|.|.+ .+++++|+|+
T Consensus 82 ~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~--~~~~~~i~~~ 154 (309)
T 4fuu_A 82 ARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQ--QQPELGIDII 154 (309)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHH--SCCSSEEEEE
T ss_pred eEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhh--cCCCCceEEE
Confidence 78999999985 35789999999999754 6999999999999999999988 4689999999
Q ss_pred EeCCCCCCC--------------cChHHHHhcCC-CcCCceEEEEeecCcCCCCcceeecCCC---HHHHHHHHHHhcCC
Q 002429 229 FNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAVDLEAMGIGGRSALFQAGPN---LWAVENFAAVAKYP 290 (923)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~-~~~~v~a~iNlD~~G~gG~~~lfq~g~~---~~li~~y~~~a~~p 290 (923)
|+++||.|+ .||+.|++++. +..++.++||+||+|.+++....+.+.. +.+.+.+.+.+...
T Consensus 155 ~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T 4fuu_A 155 FLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKA 234 (309)
T ss_dssp EECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHT
T ss_pred eecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhc
Confidence 999999995 79999997654 3578999999999999887765543221 33444443332211
Q ss_pred CCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecC----CCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 002429 291 SGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD----KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (923)
Q Consensus 291 ~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~----~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~ 362 (923)
..... ...+.+. ...+||.+|.+.+|||+++++... ..++|||++||+|+||+++||++|++++++++.
T Consensus 235 ~~~~~--~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 235 GYGKT--FIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp TCTTT--EEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred CCccc--ccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 11110 1112222 236799999876899999998643 345799999999999999999999999999864
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=4.5e-35 Score=322.78 Aligned_cols=259 Identities=18% Similarity=0.240 Sum_probs=194.2
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
+.....+.|+.| ++||++||++++++++||.++|+++| ++++.|.|...... ..+.+..|
T Consensus 9 ~~~~~~~~l~~i--l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~~------------~~~~~~~N 68 (312)
T 4f9u_A 9 DEVHFNRTLDSI--LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVPV------------FGELTFAN 68 (312)
T ss_dssp CHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEETT------------TEEEEEEE
T ss_pred HHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEeEEEecCC------------CCceeEEE
Confidence 445556667777 47999999999999999999999998 56777776542110 01236789
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccC-----CCCCCCCChhHHHHHHHHHHHHHhc-----CCCCCCcEEEEEeCCCC
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVS-----AGEGAGDCSSCVAVMLELARVMSQW-----AHEFKNAVIFLFNTGEE 234 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~-----~spGA~Dd~sgva~mLE~ar~L~~~-----~~~p~~~I~flf~~~EE 234 (923)
||++++|+ +++.|+++|||||++ ..+||+||++|||+|||+||.|.+. +.+|+|+|+|+|++|||
T Consensus 69 ii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE 143 (312)
T 4f9u_A 69 VVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEE 143 (312)
T ss_dssp EEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCS
T ss_pred EEEEECCC-----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCcc
Confidence 99999985 457899999999985 3589999999999999999999752 46799999999999999
Q ss_pred CC--------CcChHHHHhcCCCc-------------CCceEEEEeecCcCCCCcceeecCCCHHH----HHH---HHHH
Q 002429 235 EG--------LNGAHSFVTQHPWS-------------TTIRVAVDLEAMGIGGRSALFQAGPNLWA----VEN---FAAV 286 (923)
Q Consensus 235 ~g--------l~GS~~f~~~h~~~-------------~~v~a~iNlD~~G~gG~~~lfq~g~~~~l----i~~---y~~~ 286 (923)
.| ++||++|+++|++. .++.+++|+|++|..++..........+. .+. ..+.
T Consensus 144 ~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 223 (312)
T 4f9u_A 144 AFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRTA 223 (312)
T ss_dssp CSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHHT
T ss_pred ccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHHh
Confidence 88 89999999876432 36899999999998877642211111221 111 2221
Q ss_pred hcCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 287 AKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 287 a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
...+............+ ..++||.+|.+ .|||+++++.....++|||+.||+|+||+++|+++++.++.++.+....
T Consensus 224 ~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~ 300 (312)
T 4f9u_A 224 GQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKR 300 (312)
T ss_dssp TCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCC--CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11111111111111112 23689999998 8999999998888888999999999999999999999999999987766
Q ss_pred CCCCC
Q 002429 367 TSIPK 371 (923)
Q Consensus 367 ~~l~~ 371 (923)
...|.
T Consensus 301 ~~~P~ 305 (312)
T 4f9u_A 301 HTSPV 305 (312)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 66664
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=5e-35 Score=322.38 Aligned_cols=250 Identities=18% Similarity=0.234 Sum_probs=198.4
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccc
Q 002429 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (923)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~ 160 (923)
.++|+++||+++|++|+++++|..||+++.++++||.++|+++| +++++|.+.... .. ..+.
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~---g~~~ 80 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFG------AKVYQQEAILTA---------YD---GTKL 80 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TT---SCEE
T ss_pred ccccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEEeeccc---------cC---CCcc
Confidence 56899999999999999999999999999999999999999998 456666654320 00 1133
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s-------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~f 227 (923)
+..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|++. +++++|+|
T Consensus 81 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 81 EARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 678999999884 35799999999999876 79999999999999999999986 48999999
Q ss_pred EEeCCCCCCC-------------cChHHHHhcCCC-cCCceEEEEeecCcCCCCcceeecCC-C---HHHHHHHHHHhcC
Q 002429 228 LFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-N---LWAVENFAAVAKY 289 (923)
Q Consensus 228 lf~~~EE~gl-------------~GS~~f~~~h~~-~~~v~a~iNlD~~G~gG~~~lfq~g~-~---~~li~~y~~~a~~ 289 (923)
+|+++||.|+ .||+.|+++++. .+++.++||+|++|.+++..... +. . +.+++.+.+.++
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~- 231 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAAR- 231 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHH-
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHH-
Confidence 9999999999 999999964443 36899999999999988764322 22 1 234555544331
Q ss_pred CCCcccccccccC---CCCCCCCchHHhhhcCCCeEEEEeec------CCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 002429 290 PSGQIIGQDLFAS---GVFETATDFQVYTEVAGLSGLDFAYT------DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (923)
Q Consensus 290 p~~~~l~~e~f~~---g~ips~TD~~~F~~~~GiPgld~a~~------~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv 360 (923)
..+. ...|+. |.+ .+||.+|.+++|||+++++.. ...++|||+.||+|+||+++|++++++++.++
T Consensus 232 ~~g~---~~~f~~~~~g~~--~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 232 DLGY---GKYFINAAGGAI--TDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp HHTC---TTTEEEEECCCC--CCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred HcCC---cceeccCCCCCC--CCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 1111 112221 222 689999998679999999865 34578999999999999999999999999998
Q ss_pred HH
Q 002429 361 LQ 362 (923)
Q Consensus 361 ~~ 362 (923)
++
T Consensus 307 y~ 308 (309)
T 3tc8_A 307 YN 308 (309)
T ss_dssp HH
T ss_pred hc
Confidence 74
No 4
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=2.6e-34 Score=317.18 Aligned_cols=249 Identities=19% Similarity=0.291 Sum_probs=179.8
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
++|+++|++++|++|+++++|..||+++.++++||.++|+++| +++++|.+.... +. ..+.+
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~---------~~---g~~~~ 83 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFG------AKVYNQYADLIA---------YD---GTILK 83 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC---------TT---SCEEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEeeccc---------cC---CCccc
Confidence 6899999999999999999999999999999999999999998 456666654210 00 11235
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s-------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~fl 228 (923)
..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|.+. +++++|+|+
T Consensus 84 ~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv 156 (314)
T 3gux_A 84 SRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIV 156 (314)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred ceEEEEEECCC-----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEE
Confidence 78999999884 35789999999999865 79999999999999999999985 489999999
Q ss_pred EeCCCCCCC--------------cChHHHHhcCCC-cCCceEEEEeecCcCCCCcceeecCCC----HHHHHHHHHHhcC
Q 002429 229 FNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGPN----LWAVENFAAVAKY 289 (923)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~h~~-~~~v~a~iNlD~~G~gG~~~lfq~g~~----~~li~~y~~~a~~ 289 (923)
|+++||.|+ +||++|+++++. ..++.++||+||+|..++. +++.+.. +++++.+.+.++.
T Consensus 157 ~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~-~~~~g~~~~~~~~l~~~~~~~~~~ 235 (314)
T 3gux_A 157 FFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDAT-FYYEGYSARTARSEMKKIWKKAHE 235 (314)
T ss_dssp EECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCC-EEECTTHHHHCHHHHHHHHHHHHH
T ss_pred EECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCc-eeeeccccccHHHHHHHHHHHHHH
Confidence 999999999 999999964443 3789999999999998876 4554542 3555655543321
Q ss_pred CCCccccccccc---CCCCCCCCchHHhhhcCCCeEEEEeecC-------CCCCCCCcCCCcCCCCHHHHHHHHHHHHHH
Q 002429 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYTD-------KSAVYHTKNDRLDLLKPGSLQHLGENMLDF 359 (923)
Q Consensus 290 p~~~~l~~e~f~---~g~ips~TD~~~F~~~~GiPgld~a~~~-------~~~~YHT~~Dt~d~i~~~slq~~g~~vl~l 359 (923)
.+. ...|+ .|. ..+||.+|.+++|||+++++... ..++|||+.||+|+||+++|++.+++++.+
T Consensus 236 -~g~---~~~f~~~~~~~--~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~ 309 (314)
T 3gux_A 236 -LGY---GKYFVKEDGGE--TVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDV 309 (314)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHH
T ss_pred -cCC---ccccccccCCC--CCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHH
Confidence 111 01121 122 36999999986799999998653 247899999999999999999999999999
Q ss_pred HHH
Q 002429 360 LLQ 362 (923)
Q Consensus 360 v~~ 362 (923)
+++
T Consensus 310 ~y~ 312 (314)
T 3gux_A 310 IYN 312 (314)
T ss_dssp HHT
T ss_pred Hhh
Confidence 874
No 5
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=2.7e-34 Score=319.38 Aligned_cols=252 Identities=21% Similarity=0.240 Sum_probs=185.7
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
+.++..+.|+.| ++||++||++++++++||.++|++++ ++++.|.|..... . ..+.+..|
T Consensus 36 ~~~~~~~~l~~i--l~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~---~---------~~~~~~~N 95 (330)
T 4fai_A 36 DKLHLREAIDKI--LIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAP---I---------KGKLHFHN 95 (330)
T ss_dssp CHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEET---T---------TEEEEEEE
T ss_pred HHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEeeeeeecC---C---------CCceeEEE
Confidence 445555556655 57999999999999999999999998 5677777664211 0 01236789
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC----CCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCCCC
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEEGL 237 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~----spGA~Dd~sgva~mLE~ar~L~~---~~~~p~~~I~flf~~~EE~gl 237 (923)
||++++|+ .++.|+|+|||||++. .+||+||++|||+|||++|.|++ .+.+|+++|+|+|++|||.|+
T Consensus 96 ii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl 170 (330)
T 4fai_A 96 IIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFE 170 (330)
T ss_dssp EEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSS
T ss_pred EEEEECCC-----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccc
Confidence 99999874 4678999999999964 47999999999999999999976 346799999999999999985
Q ss_pred --------cChHHHHhcC---CCcCCceEEEEeecCcCCCCcceeecCCCHHHHHHHHH----Hh------cCC---CCc
Q 002429 238 --------NGAHSFVTQH---PWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAA----VA------KYP---SGQ 293 (923)
Q Consensus 238 --------~GS~~f~~~h---~~~~~v~a~iNlD~~G~gG~~~lfq~g~~~~li~~y~~----~a------~~p---~~~ 293 (923)
.||++|+++. .+.+++.++||+||+|.+++.......+..+....+.. .. .++ ...
T Consensus 171 ~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T 4fai_A 171 EWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQ 250 (330)
T ss_dssp SCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC-----------
T ss_pred cccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhcccccc
Confidence 7999999753 23578999999999999887754332222222211111 00 000 000
Q ss_pred ccccccccCC---CCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 002429 294 IIGQDLFASG---VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (923)
Q Consensus 294 ~l~~e~f~~g---~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~ 362 (923)
......|+.. .....+||.+|.+ .|||+++++..+.+++|||+.||+|+||+++++++++.+..++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 251 RDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp ----CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 0001111110 0113689999998 899999998888888999999999999999999999999888865
No 6
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=2.6e-33 Score=310.79 Aligned_cols=262 Identities=19% Similarity=0.211 Sum_probs=197.9
Q ss_pred CCcccccC--CCCCCHHHHHH-HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccc
Q 002429 73 PLTAEQAG--RRGFSELEAMK-HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGT 149 (923)
Q Consensus 73 ~~~~~~~~--~~~fs~erA~~-~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~ 149 (923)
+++.++.. +.+|+.+|+++ +|+.+ +++|.+||+++.++++||.+++++++. ..+++.|.+..+..
T Consensus 23 ~l~~~~~~~~~~~~~~~~~~~~~L~~~--~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~------ 90 (330)
T 3pb6_X 23 SLPEARLRRVVGQLDPQRLWSTYLRPL--LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP------ 90 (330)
T ss_dssp CCCHHHHHHHHHTCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET------
T ss_pred CCCHHHHHhhcccCCHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc------
Confidence 45444332 35799999998 68888 789999999999999999999999952 25677776653210
Q ss_pred cccccccccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC------CCCCCCChhHHHHHHHHHHHHHhc-----C
Q 002429 150 GVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA------GEGAGDCSSCVAVMLELARVMSQW-----A 218 (923)
Q Consensus 150 ~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~------spGA~Dd~sgva~mLE~ar~L~~~-----~ 218 (923)
. .+.+..|||++++|+ .++.|+++|||||++. .+||.||++|||+|||++|.|.+. +
T Consensus 91 ---~----g~~~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~ 158 (330)
T 3pb6_X 91 ---L----GPVDFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKK 158 (330)
T ss_dssp ---T----EEEEEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ---c----CCccceEEEEEECCC-----CCceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhccc
Confidence 0 123679999999885 3578999999999863 389999999999999999999873 3
Q ss_pred CCCCCcEEEEEeCCCCC--------CCcChHHHHhcCC---------CcCCceEEEEeecCcCCCCcceeecCCCHHHHH
Q 002429 219 HEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP---------WSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVE 281 (923)
Q Consensus 219 ~~p~~~I~flf~~~EE~--------gl~GS~~f~~~h~---------~~~~v~a~iNlD~~G~gG~~~lfq~g~~~~li~ 281 (923)
.+++++|+|+|+++||. |+.||++|++++. ..++++++||+||+|..++......+...++.+
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~ 238 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFH 238 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecCcchHHHH
Confidence 57999999999999999 9999999986521 347899999999999988764211111223222
Q ss_pred HHHH---Hh-------cCCCCcccccccccCC--CCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHH
Q 002429 282 NFAA---VA-------KYPSGQIIGQDLFASG--VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSL 349 (923)
Q Consensus 282 ~y~~---~a-------~~p~~~~l~~e~f~~g--~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~sl 349 (923)
.+.+ .. .+|... ..|+.+ .-...|||.+|.+ .|||++++......+.|||+.||+|+||++++
T Consensus 239 ~l~~i~~~~~~~g~~~~~p~~~----~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l 313 (330)
T 3pb6_X 239 RLRSIEKRLHRLNLLQSHPQEV----MYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLHPPTV 313 (330)
T ss_dssp HHHHHHHHHHHTTCCSSCCSSC----SSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHH
T ss_pred HHHHHHHHHHHcCccccCCccc----ccccccccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHH
Confidence 2221 11 122211 122110 1124799999999 99999999877777889999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 002429 350 QHLGENMLDFLLQT 363 (923)
Q Consensus 350 q~~g~~vl~lv~~l 363 (923)
+++++.+..++.+.
T Consensus 314 ~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 314 HNLCRILAVFLAEY 327 (330)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988764
No 7
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.98 E-value=1.3e-31 Score=297.66 Aligned_cols=268 Identities=20% Similarity=0.258 Sum_probs=198.6
Q ss_pred cccCCCCCcccccC--CCCCCHHHH-HHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHh--cccccCCcceEEEEeeecc
Q 002429 67 YEHMPPPLTAEQAG--RRGFSELEA-MKHVKALTQLGPHAVGSDALDRALQYVLAASQK--IKESKHWEADVEVDFFHAK 141 (923)
Q Consensus 67 ~~~lP~~~~~~~~~--~~~fs~erA-~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~--i~~~~~~~~~ve~d~~~~~ 141 (923)
.+++|.+++.++.. +.+++.+|+ .++|++| +++|.++|++++++++||.++|++ .| ++++++.+...
T Consensus 9 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~ 80 (329)
T 2afw_A 9 NYHQPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQ 80 (329)
T ss_dssp HHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEEC
T ss_pred cccCCCCCChHHHHHhhhhcCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEec
Confidence 34577777654433 356999999 8999999 689999999999999999999999 54 46777765532
Q ss_pred CCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCC-------CCCCCChhHHHHHHHHHHHH
Q 002429 142 SGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------EGAGDCSSCVAVMLELARVM 214 (923)
Q Consensus 142 ~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s-------pGA~Dd~sgva~mLE~ar~L 214 (923)
.. ..+.+..|||++++|+ +++.|+++||||||+.+ +||.||++|||+|||++|.|
T Consensus 81 ~~-------------~g~~~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l 142 (329)
T 2afw_A 81 TP-------------YGYRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARAL 142 (329)
T ss_dssp CT-------------TSSEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHT
T ss_pred CC-------------CCCceEeEEEEEECCC-----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHH
Confidence 10 0122579999999873 46889999999999866 89999999999999999999
Q ss_pred Hhc--------CCCCCCcEEEEEeCCCCC--------CCcChHHHHhcCC------------CcCCceEEEEeecCcCCC
Q 002429 215 SQW--------AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAVDLEAMGIGG 266 (923)
Q Consensus 215 ~~~--------~~~p~~~I~flf~~~EE~--------gl~GS~~f~~~h~------------~~~~v~a~iNlD~~G~gG 266 (923)
.+. +.+++++|+|+|+++||. |+.||++|++++. ..+++.++||+|++|.++
T Consensus 143 ~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~ 222 (329)
T 2afw_A 143 DKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN 222 (329)
T ss_dssp HHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSS
T ss_pred HHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCC
Confidence 875 357899999999999998 8999999997642 146799999999999887
Q ss_pred Ccce--eecCCCHHHHHH---HHHHhcCC---CCcccccccccCCCC--CCCCchHHhhhcCCCeEEEEeecCCCCCCCC
Q 002429 267 RSAL--FQAGPNLWAVEN---FAAVAKYP---SGQIIGQDLFASGVF--ETATDFQVYTEVAGLSGLDFAYTDKSAVYHT 336 (923)
Q Consensus 267 ~~~l--fq~g~~~~li~~---y~~~a~~p---~~~~l~~e~f~~g~i--ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT 336 (923)
...+ +.. +.+ +.+. ..+..... .........|..... ...+||.+|.+ .|||++++......+.|||
T Consensus 223 ~~~~~~~~~-~~~-~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt 299 (329)
T 2afw_A 223 PTFPNFFPN-SAR-WFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHT 299 (329)
T ss_dssp CCBCCCCGG-GHH-HHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTS
T ss_pred CceeeeccC-cch-HHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCC
Confidence 6542 221 112 2221 11211000 000111112321111 13699999998 7999999998777789999
Q ss_pred cCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 002429 337 KNDRLDLLKPGSLQHLGENMLDFLLQT 363 (923)
Q Consensus 337 ~~Dt~d~i~~~slq~~g~~vl~lv~~l 363 (923)
++||++++++++++++++.+..++.+.
T Consensus 300 ~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 300 MDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp TTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888887764
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.98 E-value=4.8e-31 Score=287.10 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=198.1
Q ss_pred CCCCHHHHHHHHHHHHcC-----CCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQL-----GPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~i-----gpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~ 156 (923)
++++.++++++|++|+++ ++|..|++++.++++||.+++++++ ++++.+.+...
T Consensus 2 ~~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g------~~v~~~~~~~~--------------- 60 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSG--------------- 60 (284)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEET---------------
T ss_pred CcCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEEEeccC---------------
Confidence 367889999999999875 3677888888999999999999998 35555543210
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC
Q 002429 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG 236 (923)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~g 236 (923)
..+..||+++++|+ .+++.|+++||+|+|+.++||.||++|+|++||++|.|++.+.+++++|+|+|+++||.|
T Consensus 61 --~~~~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g 134 (284)
T 1tkj_A 61 --GATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELG 134 (284)
T ss_dssp --TEEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred --CCCceeEEEEEeCC----CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC
Confidence 01457999999874 245789999999999999999999999999999999999887789999999999999999
Q ss_pred CcChHHHHhcCCC--cCCceEEEEeecCcCCCCcceeecCCCHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHh
Q 002429 237 LNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVY 314 (923)
Q Consensus 237 l~GS~~f~~~h~~--~~~v~a~iNlD~~G~gG~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F 314 (923)
+.||+.++++++. .+++.++||+|++|.++....+. +.++.+.+.+.+.+++ .+.. ..... .-..+|||.+|
T Consensus 135 ~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~-~gi~--~~~~~--~~~~~sD~~~f 208 (284)
T 1tkj_A 135 LIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAG-LNVP--TEIET--EGDGRSDHAPF 208 (284)
T ss_dssp SHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHH-HTCC--CEECC--SSTTCSTHHHH
T ss_pred CcCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHHHHHHH-cCCC--cccCC--CCCCCCchHHH
Confidence 9999999988764 36899999999999876544443 3456555555443221 1110 01111 11357999999
Q ss_pred hhcCCCeEEEEeecC-------------------CCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 002429 315 TEVAGLSGLDFAYTD-------------------KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIP 370 (923)
Q Consensus 315 ~~~~GiPgld~a~~~-------------------~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a~~l~ 370 (923)
.+ .|||++.+.... ...+|||+.||+++++++.++++++.+..+++.|++++.+|
T Consensus 209 ~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 209 KN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp HH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HH-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 98 999999987641 24679999999999999999999999999999999988765
No 9
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.97 E-value=2.5e-29 Score=275.33 Aligned_cols=260 Identities=18% Similarity=0.246 Sum_probs=197.0
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
.+++.++++++|++|+++++|..+|+++.++++||.+++++++... + .++++.+... ..+
T Consensus 15 ~~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~--~-~~~~~~~~~~-----------------~~~ 74 (299)
T 1rtq_A 15 PQVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASL--P-NASVKQVSHS-----------------GYN 74 (299)
T ss_dssp GGCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTS--T-TEEEEEEEET-----------------TEE
T ss_pred HhcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCc--c-cceeeeeccC-----------------CCC
Confidence 5789999999999999999899999988899999999999987321 1 2444433210 014
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCC--------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~--------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~E 233 (923)
..||+++++|+ +.+++.|+++||+|+|+. ++||.||++|||++||++|.|++.+.+++++|+|+|+++|
T Consensus 75 ~~nvi~~~~g~---~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~E 151 (299)
T 1rtq_A 75 QKSVVMTITGS---EAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAE 151 (299)
T ss_dssp EEEEEEEECCS---SEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCG
T ss_pred CceEEEEEECC---CCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCc
Confidence 58999999875 224578999999999973 7999999999999999999999887789999999999999
Q ss_pred CCCCcChHHHHhcCCC-cCCceEEEEeecCcCCCC--cceeecC-CCHHHHHHHHHHhc--CCCCcccccccccCCCCCC
Q 002429 234 EEGLNGAHSFVTQHPW-STTIRVAVDLEAMGIGGR--SALFQAG-PNLWAVENFAAVAK--YPSGQIIGQDLFASGVFET 307 (923)
Q Consensus 234 E~gl~GS~~f~~~h~~-~~~v~a~iNlD~~G~gG~--~~lfq~g-~~~~li~~y~~~a~--~p~~~~l~~e~f~~g~ips 307 (923)
|.|+.||+.++++++. .+++.++||+|++|..|. .+.+... .++.+.+...+.++ .|. +... +.. ....
T Consensus 152 E~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~~~~~---i~~~-~~~-~~~~ 226 (299)
T 1rtq_A 152 EVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYLPS---LTYG-FDT-CGYA 226 (299)
T ss_dssp GGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHHHCTT---CCEE-EEC-CSSC
T ss_pred cCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHHhCcc---CCcc-cCC-CCCC
Confidence 9999999999977654 367899999999987443 2334332 24544333332211 111 1111 111 1125
Q ss_pred CCchHHhhhcCCCeEEEEee---cCCCCCCCCcCCCcCCCCH--HHHHHHHHHHHHHHHHHhcCCCCC
Q 002429 308 ATDFQVYTEVAGLSGLDFAY---TDKSAVYHTKNDRLDLLKP--GSLQHLGENMLDFLLQTASSTSIP 370 (923)
Q Consensus 308 ~TD~~~F~~~~GiPgld~a~---~~~~~~YHT~~Dt~d~i~~--~slq~~g~~vl~lv~~la~a~~l~ 370 (923)
+|||.+|.+ .|||++.+.. .+...+|||+.||++++|+ ..++++++.+..++++|++++.+.
T Consensus 227 ~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 227 CSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDT 293 (299)
T ss_dssp CSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CCcHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 799999998 9999987642 2344679999999999998 588999999999999999987654
No 10
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.96 E-value=1.8e-29 Score=301.17 Aligned_cols=209 Identities=16% Similarity=0.177 Sum_probs=176.3
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEEeCCCCC
Q 002429 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLFNTGEEE 235 (923)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~----~~~p~~~I~flf~~~EE~ 235 (923)
....|||++++|+ +.++++|+++||+||| ++||.||++|+|+|||++|.|.+. +.+|+|+|+|++|++||.
T Consensus 264 ~~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~--~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~ 338 (640)
T 3kas_A 264 IKILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF 338 (640)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG
T ss_pred eeEEEEEEEEeCC---cCCCCceeeecccCCC--CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCccc
Confidence 3678999999985 3467899999999999 589999999999999999999864 678999999999999999
Q ss_pred CCcChHHHHhcCC-C-cCCceEEEEeecCcCCCCcceeecCC-CHHHHHHHHHHhcCCCCc-ccccc-ccc--CCCCCCC
Q 002429 236 GLNGAHSFVTQHP-W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQ-IIGQD-LFA--SGVFETA 308 (923)
Q Consensus 236 gl~GS~~f~~~h~-~-~~~v~a~iNlD~~G~gG~~~lfq~g~-~~~li~~y~~~a~~p~~~-~l~~e-~f~--~g~ips~ 308 (923)
|+.||++|+++|. + .+++.++||+|++|.|++...++++| ..++++.+.+.+++|.+. ++.++ .|. .+.++++
T Consensus 339 gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~ 418 (640)
T 3kas_A 339 GSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLD 418 (640)
T ss_dssp TSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTT
T ss_pred CchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCC
Confidence 9999999999884 3 48899999999999988777787665 356677777767888763 44432 343 4678999
Q ss_pred CchHHhhhcCCCeEEEEeecCC-CC-CCCCcCCCcCCCCH------HHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 002429 309 TDFQVYTEVAGLSGLDFAYTDK-SA-VYHTKNDRLDLLKP------GSLQHLGENMLDFLLQTASSTSIPKGN 373 (923)
Q Consensus 309 TD~~~F~~~~GiPgld~a~~~~-~~-~YHT~~Dt~d~i~~------~slq~~g~~vl~lv~~la~a~~l~~~~ 373 (923)
|||.+|.++.|||+++++|..+ .| +|||.+||+++++. ..++.+++.+..++.+|++++.+|.+.
T Consensus 419 sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~ 491 (640)
T 3kas_A 419 NAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDY 491 (640)
T ss_dssp STHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCT
T ss_pred cchHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 9999999889999999999865 33 59999999998764 467888999999999999999998764
No 11
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.95 E-value=2.3e-28 Score=294.16 Aligned_cols=209 Identities=19% Similarity=0.240 Sum_probs=174.0
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCC
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEE 235 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~---~~~~p~~~I~flf~~~EE~ 235 (923)
.....|||++++|+ +.++++|+++||+|||+ +||.||++|+|+|||++|.|.+ .+.+|+|+|+|++|++||.
T Consensus 309 ~~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~ 383 (707)
T 3fed_A 309 ITRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF 383 (707)
T ss_dssp EEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred EEEEEEEEEEEeCC---CCCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccc
Confidence 34789999999986 34678999999999997 6999999999999999999986 4678999999999999999
Q ss_pred CCcChHHHHhcCC--CcCCceEEEEeecCcCCCCcceeecCC-CHHHHHHHHHHhcCCCC----ccccccccc-------
Q 002429 236 GLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG----QIIGQDLFA------- 301 (923)
Q Consensus 236 gl~GS~~f~~~h~--~~~~v~a~iNlD~~G~gG~~~lfq~g~-~~~li~~y~~~a~~p~~----~~l~~e~f~------- 301 (923)
|+.||++|+++|+ +.+++.++||+|++|.|+....++++| ..++++.+.+.+++|.+ .++.+..++
T Consensus 384 Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 384 GLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp TSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred cchhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccc
Confidence 9999999998886 457899999999999998888888666 46777777777789976 334332222
Q ss_pred -----CCCCCCCCchHHhhhcCCCeEEEEeecCC-------C-CCCCCcCCCcCCCCH------HHHHHHHHHHHHHHHH
Q 002429 302 -----SGVFETATDFQVYTEVAGLSGLDFAYTDK-------S-AVYHTKNDRLDLLKP------GSLQHLGENMLDFLLQ 362 (923)
Q Consensus 302 -----~g~ips~TD~~~F~~~~GiPgld~a~~~~-------~-~~YHT~~Dt~d~i~~------~slq~~g~~vl~lv~~ 362 (923)
.+.+.++|||.+|.++.|||+++++|..+ . ++|||.+||+++++. ...+.+++....++.+
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~ 543 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYE 543 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 12345899999999989999999999844 3 379999999987644 4666788999999999
Q ss_pred HhcCCCCCCC
Q 002429 363 TASSTSIPKG 372 (923)
Q Consensus 363 la~a~~l~~~ 372 (923)
||+++.+|.+
T Consensus 544 La~~~vlP~~ 553 (707)
T 3fed_A 544 LVDSKIIPFN 553 (707)
T ss_dssp HHHCSSCCCC
T ss_pred HhCCccCCCC
Confidence 9999988864
No 12
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.94 E-value=1.3e-26 Score=267.28 Aligned_cols=199 Identities=18% Similarity=0.201 Sum_probs=159.3
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcCh
Q 002429 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (923)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 240 (923)
...||+++++|+ +.+++.|+++||+|||+.++||.||++|++++||++|.|++.+.+|+|+|+|+|+++||.|+.||
T Consensus 234 ~~~Nvi~~~~g~---~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs 310 (444)
T 3iib_A 234 TSYNVIAEVKGS---TKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGG 310 (444)
T ss_dssp EEEEEEEEECCS---TEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHH
T ss_pred eeEEEEEEEeCC---CCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCH
Confidence 678999999985 33578999999999999999999999999999999999999878899999999999999999999
Q ss_pred HHHHhcCCC-cCCceEEEEeecCcCCCCcceeecCC-CHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhhcC
Q 002429 241 HSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVA 318 (923)
Q Consensus 241 ~~f~~~h~~-~~~v~a~iNlD~~G~gG~~~lfq~g~-~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~ 318 (923)
+.|+++|.. .+++.+++|+|+.|.....+.++.++ ...+++.+.+.. ++.+... . .....++|||.+|.+ .
T Consensus 311 ~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~--~---~~~~~~~SD~~~f~~-~ 383 (444)
T 3iib_A 311 KTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA--G---NNKASGGPDVSMLPA-L 383 (444)
T ss_dssp HHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE--C---CSCCCCCGGGTTSGG-G
T ss_pred HHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc--c---cCCCCCCCccHHHHH-C
Confidence 999988854 36789999999866432222233222 234555555432 2333211 1 122456899999998 8
Q ss_pred CCeEEEEeecCC--CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 002429 319 GLSGLDFAYTDK--SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSI 369 (923)
Q Consensus 319 GiPgld~a~~~~--~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a~~l 369 (923)
|||++++..... ..+|||++||+|+++++.|++.++.+..+++.+|++++.
T Consensus 384 GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 384 GVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp TCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999976433 357999999999999999999999999999999998764
No 13
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.93 E-value=3.4e-25 Score=253.77 Aligned_cols=198 Identities=22% Similarity=0.261 Sum_probs=155.3
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChH
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAH 241 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~ 241 (923)
..||+++++|+.....+++.|+++||+|||+.+|||.||++|||+|||++|.|.+ .+++|+|+|+++++||.|+.||+
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~--~~~~~~i~~~~~~~EE~g~~Gs~ 280 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSK--LKTDTELRFITFGAEENGLIGSK 280 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEESSSTTTSHHHH
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhc--cCCCceEEEEEECCccccchhHH
Confidence 5799999998521012678999999999999999999999999999999999987 45789999999999999999999
Q ss_pred HHHhcCC--CcCCceEEEEeecCcCCCC-cceeecCC-CHHHHHHHH----HHhcCCCCcccccccccCCCCCCCCchHH
Q 002429 242 SFVTQHP--WSTTIRVAVDLEAMGIGGR-SALFQAGP-NLWAVENFA----AVAKYPSGQIIGQDLFASGVFETATDFQV 313 (923)
Q Consensus 242 ~f~~~h~--~~~~v~a~iNlD~~G~gG~-~~lfq~g~-~~~li~~y~----~~a~~p~~~~l~~e~f~~g~ips~TD~~~ 313 (923)
.|+++++ +.+++.++||+|++|.++. ......+. ...+...+. +....| . .. ...++|||.+
T Consensus 281 ~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~-----~~~~~SD~~~ 350 (421)
T 2ek8_A 281 KYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L---PY-----GQEGRSDHES 350 (421)
T ss_dssp HHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C---CE-----EECCSSTHHH
T ss_pred HHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C---CC-----CCCCCCccHH
Confidence 9998765 3467999999999998765 22223222 112222221 111222 0 01 1235799999
Q ss_pred hhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 002429 314 YTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKG 372 (923)
Q Consensus 314 F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a~~l~~~ 372 (923)
|.+ .|||++.+......++|||++||+++++++.++++++.+..+++.|++.+.+|.+
T Consensus 351 F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 351 FHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIE 408 (421)
T ss_dssp HHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 997 9999998775555567999999999999999999999999999999999888754
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.81 E-value=6.2e-19 Score=197.32 Aligned_cols=178 Identities=19% Similarity=0.214 Sum_probs=135.9
Q ss_pred EcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 002429 169 ILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (923)
Q Consensus 169 i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (923)
++|+ .++.|+++||+|+.. +|+||+||+|+++|++|+|++ .++++++.|+|++ |..||..|+++|+
T Consensus 174 ipG~-----t~~~IllsaH~cHP~---~ANDNaSG~a~lleLar~l~~--~~~~~t~rFvf~p----g~iGS~~yl~~~~ 239 (435)
T 3k9t_A 174 IRGE-----LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSK--LKTKYSYRFLFAP----ETIGSITWLSRNE 239 (435)
T ss_dssp ECCS-----SSCEEEEEEECCCCS---CTTTTHHHHHHHHHHHHHHTT--SCCSSEEEEEEEC----TTHHHHHHHHHCG
T ss_pred ecCC-----CCCEEEEEEEcCCCC---CCCccchHHHHHHHHHHHHhc--CCCCceEEEEEcC----ccHHHHHHHHhCh
Confidence 4774 458899999999843 699999999999999999986 4589999999998 6899999998886
Q ss_pred C-cCCceEEEEeecCcCCCCcceeecCC-CHHHHHHHH-HHhcCCCCcccccccccCCCCCCCCchHHhhhcCC--CeEE
Q 002429 249 W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFA-AVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAG--LSGL 323 (923)
Q Consensus 249 ~-~~~v~a~iNlD~~G~gG~~~lfq~g~-~~~li~~y~-~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~G--iPgl 323 (923)
. .+++++.+|+||+|.++... +..+. .+++++... ++.++........+ | .+.++||++|.+ .| ||..
T Consensus 240 ~~l~~i~a~lnLDmVGd~~~~~-y~~sr~g~~~~d~~~~~vl~~~~~~~~~~~-f----~~~GSDh~qF~s-pG~dIPv~ 312 (435)
T 3k9t_A 240 DKLKNIKMGLVATCVGDAGIKN-YKRTKFGDAEIDKIVEKVLMHCGSEYYVAD-F----FPWGSDERQFSS-PGINLSVG 312 (435)
T ss_dssp GGGGGEEEEEECCSCCSSSCEE-EECCTTSSSHHHHHHHHHHHHSSSCEEEEC-C----CSCSSTHHHHTS-TTTCCCEE
T ss_pred HhhhceEEEEEEEEecCCCCce-eecCCCCChHHHHHHHHHHhhcCCCCceec-C----CCCCCcchhHhh-CCCCCCEE
Confidence 4 46899999999999987543 34223 233433322 22222111101111 2 345799999998 88 9999
Q ss_pred EEeecCC-CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 002429 324 DFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (923)
Q Consensus 324 d~a~~~~-~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a~ 367 (923)
.+.-... .+.|||+.||+++|+++.|+...+.++..+..|-+..
T Consensus 313 ~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 313 SLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp EEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 9876333 4579999999999999999999999999999988763
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.71 E-value=1.3e-16 Score=171.81 Aligned_cols=232 Identities=18% Similarity=0.160 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.+++|.++ | ..|.++..+.+||.++|+++| ++++.+.. .+..|++
T Consensus 6 ~~~~~~l~~lv~i-p--s~s~~e~~~~~~l~~~l~~~G------~~~~~~~~---------------------~~~~nv~ 55 (269)
T 4h2k_A 6 EKVVSLAQDLIRR-P--SISPNDEGCQQIIAERLEKLG------FQIEWMPF---------------------NDTLNLW 55 (269)
T ss_dssp HHHHHHHHHHHTS-C--CBTTCCTTHHHHHHHHHHTTT------CEEEECCB---------------------TTBCEEE
T ss_pred HHHHHHHHHHhCC-C--CCCCCcHHHHHHHHHHHHHcC------CeEEEEEc---------------------CCceEEE
Confidence 4778889999986 3 333444568999999999998 33332210 1457999
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~s---------------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++|+++|.|.+.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i 129 (269)
T 4h2k_A 56 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 129 (269)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccE
Confidence 988 53 34689999999999853 6999999999999999999998777788999
Q ss_pred EEEEeCCCCCCCc-ChHHHHhcCCC-cCCceEEEEeecCcCC--CCcc-eeecC----C-CHHHHHHHHHHhcCCCCccc
Q 002429 226 IFLFNTGEEEGLN-GAHSFVTQHPW-STTIRVAVDLEAMGIG--GRSA-LFQAG----P-NLWAVENFAAVAKYPSGQII 295 (923)
Q Consensus 226 ~flf~~~EE~gl~-GS~~f~~~h~~-~~~v~a~iNlD~~G~g--G~~~-lfq~g----~-~~~li~~y~~~a~~p~~~~l 295 (923)
+|+|+.+||.|.. ||+.+++.... ..+..++|+.|..+.. |..+ .-+.| + +..+++...++++.-.+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~gi~- 208 (269)
T 4h2k_A 130 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIGIT- 208 (269)
T ss_dssp EEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHSCC-
T ss_pred EEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhCCC-
Confidence 9999999999985 99999864321 3467899999976431 1111 00111 1 2345555544332101110
Q ss_pred ccccccCCCCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 002429 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (923)
Q Consensus 296 ~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~ 365 (923)
...- ....+||.+.+.. .|+|.+.+.... + .+||+.+ .++.+.+++..+.+..+++.+.+
T Consensus 209 -~~~~---~~gggtDa~~~~~-~g~p~~~~~~~~-~-~~Hs~~E---~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 209 -PKAE---TGGGTSDGRFIAL-MGAEVVEFGPLN-S-TIHKVNE---CVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp -CEEE---CC--CHHHHHHHT-TTCEEEECCSBC-T-TTTSTTC---EEEHHHHHHHHHHHHHHHHHHC-
T ss_pred -CEEe---cCCCCchHHHHHh-hCCCEEEEEeCC-C-CCcCCcc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 0011 1235899999986 899998875444 3 3599884 78899999999999999988754
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.71 E-value=9.6e-17 Score=172.70 Aligned_cols=232 Identities=17% Similarity=0.167 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.+++|.++ |.+ |.++..+++||.++|+++|. +++.... .+..|++
T Consensus 6 ~~~~~~l~~lv~i-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~~~---------------------~~~~nv~ 55 (268)
T 3t68_A 6 SPVLALAKELISR-QSV--TPADAGCQDLMIERLKALGF------EIESMVF---------------------EDTTNFW 55 (268)
T ss_dssp CHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHHTTC------EECCCEE---------------------TTEEC-C
T ss_pred HHHHHHHHHHhCC-CCC--CCCchHHHHHHHHHHHHCCC------eEEEEec---------------------CCccEEE
Confidence 4788999999986 333 33345689999999999983 2222110 1346899
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~s---------------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++ |+ ..+.|++.+|+|+||.+ +|+.||++|++++|++++.|++.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v 129 (268)
T 3t68_A 56 ARR-GT-----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSI 129 (268)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 988 53 34689999999999853 6999999999999999999998777788999
Q ss_pred EEEEeCCCCCCC-cChHHHHhcCC-CcCCceEEEEeecCcCC--CCcc-eeecC-----CCHHHHHHHHHHhcCCCCccc
Q 002429 226 IFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAVDLEAMGIG--GRSA-LFQAG-----PNLWAVENFAAVAKYPSGQII 295 (923)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~h~-~~~~v~a~iNlD~~G~g--G~~~-lfq~g-----~~~~li~~y~~~a~~p~~~~l 295 (923)
+|+|+.+||.|. .||+.++++.. ...+..++|++|..+.. |..+ .-+.| .+..+.+...++++.-.+...
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~~ 209 (268)
T 3t68_A 130 GFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQAP 209 (268)
T ss_dssp EEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSCC
T ss_pred EEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCCc
Confidence 999999999998 49999986432 23567899999976532 1111 11111 122355555544321111110
Q ss_pred ccccccCCCCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 002429 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (923)
Q Consensus 296 ~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~ 365 (923)
+ .- ....+||+..|.+ .|+|++.+.... ..+||+.+ .++.+.+++..+.+..+++.|.+
T Consensus 210 -~-~~---~sgggtD~~~~~~-~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 210 -A-LL---TTGGTSDGRFIAQ-MGAQVVELGPVN--ATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp -E-EE---SSCCCHHHHHHHH-HTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred -E-Ee---cCccccHHHHHHh-cCCCEEEEeeCC--CCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 1 00 1235899999997 899988765433 34699875 67888999999999999988764
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.63 E-value=3.6e-15 Score=153.48 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=107.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 002429 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (923)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (923)
.++.+++.+.|++|.++ |.+.+++++.++++||.+++++++. +++.+... .+.
T Consensus 6 ~~~~~~~~~~l~~lv~i-~s~s~~~~e~~~~~~l~~~l~~~g~------~~~~~~~~--------------------~g~ 58 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRI-RTVQPKPDYGAAVAFFEETARQLGL------GCQKVEVA--------------------PGY 58 (198)
T ss_dssp -CCCCHHHHHHHHHHTS-CCBTTSCCHHHHHHHHHHHHHHHTC------EEEEEEEE--------------------TTE
T ss_pred chhHHHHHHHHHHHhcC-CCCCCCcCHHHHHHHHHHHHHHCCC------eEEEEEcC--------------------CCC
Confidence 46667899999999997 4445544567899999999999983 44443211 034
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 002429 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (923)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p 221 (923)
.|++++++|+ .++.+.|++.+|+|+||. ++|+.||++|++++|+++|.|.+.+.++
T Consensus 59 ~~~i~~~~g~---~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~ 135 (198)
T 1q7l_A 59 VVTVLTWPGT---NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRF 135 (198)
T ss_dssp EEEEEEECCS---STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEEccC---CCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCC
Confidence 6899999874 233578999999999974 3789999999999999999999987788
Q ss_pred CCcEEEEEeCCCCCC-CcChHHHHhc
Q 002429 222 KNAVIFLFNTGEEEG-LNGAHSFVTQ 246 (923)
Q Consensus 222 ~~~I~flf~~~EE~g-l~GS~~f~~~ 246 (923)
+++|+|+|+.+||.| +.|++.++++
T Consensus 136 ~~~v~~~~~~~EE~g~~~Ga~~~~~~ 161 (198)
T 1q7l_A 136 PRTIHMTFVPDEEVGGHQGMELFVQR 161 (198)
T ss_dssp SSCEEEEEESCGGGTSTTTHHHHTTS
T ss_pred CCCEEEEEEcccccCccccHHHHHHh
Confidence 999999999999997 7999999854
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.61 E-value=1.2e-14 Score=163.61 Aligned_cols=225 Identities=18% Similarity=0.219 Sum_probs=158.8
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
++.+.|++|+++ |.+.|.+ +++++||.+++++++. ++++| +..|+++
T Consensus 8 ~~~~~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia 54 (373)
T 1vhe_A 8 ETLTMLKDLTDA-KGIPGNE--REVRQVMKSYIEPFAD------EVTTD------------------------RLGSLIA 54 (373)
T ss_dssp HHHHHHHHHHHS-CCCTTCC--HHHHHHHHHHHGGGCS------EEEEC------------------------TTCCEEE
T ss_pred HHHHHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEc------------------------CCCcEEE
Confidence 688899999997 4455543 5789999999999983 33332 2358999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccC-------------------------------------------------------
Q 002429 168 RILPKYASEAGENAILVSSHIDTVS------------------------------------------------------- 192 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~------------------------------------------------------- 192 (923)
+++|+ ...+.|+++||+|+|+
T Consensus 55 ~~~g~----~~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~ 130 (373)
T 1vhe_A 55 KKTGA----ENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEA 130 (373)
T ss_dssp EEESS----TTSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTT
T ss_pred EecCC----CCCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhh
Confidence 88774 2347899999999997
Q ss_pred --------------------------CCCC---------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 193 --------------------------AGEG---------------------AGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 193 --------------------------~spG---------------------A~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
..+| +.||++|+|++|+++|.|.+.+ ++++|
T Consensus 131 ~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v 208 (373)
T 1vhe_A 131 RKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIV 208 (373)
T ss_dssp TTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEE
T ss_pred ccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceE
Confidence 1123 8999999999999999998753 67999
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCCC----------------Ccc-eeecC--CCHHHHHHHHHH
Q 002429 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG----------------RSA-LFQAG--PNLWAVENFAAV 286 (923)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG----------------~~~-lfq~g--~~~~li~~y~~~ 286 (923)
+|+|+++||.|+.|++.+... .+...+|++|+.+.++ ..+ ++..+ .++.+++...++
T Consensus 209 ~~~~~~~EE~G~~G~~~~~~~----~~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~~ 284 (373)
T 1vhe_A 209 YGVGTVQEEVGLRGAKTAAHT----IQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVAT 284 (373)
T ss_dssp EEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHH
T ss_pred EEEEECCcccChhhHHHHhcc----cCCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHHH
Confidence 999999999999999988642 2346789999776432 111 11111 255666666554
Q ss_pred hcCCCCcccccccccCCCCCCCCchHHh--hhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 002429 287 AKYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (923)
Q Consensus 287 a~~p~~~~l~~e~f~~g~ips~TD~~~F--~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la 364 (923)
++. .+.....+.. ...+||...| .. .|+|.+++... .. .+||+. |+++.+.+++..+.+..++..++
T Consensus 285 a~~-~gi~~~~~~~----~~ggtDa~~~~~~~-~GiPtv~lg~~-~~-~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~ 353 (373)
T 1vhe_A 285 AEE-AGIPYQFDAI----AGGGTDSGAIHLTA-NGVPALSITIA-TR-YIHTHA---AMLHRDDYENAVKLITEVIKKLD 353 (373)
T ss_dssp HHH-HTCCCEEEEE----TTCCCTHHHHTTST-TCCCEEEEEEE-EB-STTSSC---EEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHH-cCCCeEEecC----CCCCccHHHHHHhC-CCCcEEEEccc-cc-cCCChh---heecHHHHHHHHHHHHHHHHHhc
Confidence 321 1111111111 2357999999 44 79999987543 22 379975 67889999999999999998876
Q ss_pred cC
Q 002429 365 SS 366 (923)
Q Consensus 365 ~a 366 (923)
+.
T Consensus 354 ~~ 355 (373)
T 1vhe_A 354 RK 355 (373)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.59 E-value=1.6e-14 Score=161.34 Aligned_cols=220 Identities=17% Similarity=0.192 Sum_probs=156.0
Q ss_pred HHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEE
Q 002429 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (923)
Q Consensus 89 A~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~ 168 (923)
..+.|++|+++ |.+.|.++ +++++||.+++++++. +++.| +..|++++
T Consensus 8 ~~~~l~~L~~~-~s~sg~e~-~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~ 55 (353)
T 1y0y_A 8 DYELLKKVVEA-PGVSGYEF-LGIRDVVIEEIKDYVD------EVKVD------------------------KLGNVIAH 55 (353)
T ss_dssp CHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHGGGSS------EEEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHhC-CCCCccch-HHHHHHHHHHHHhhCC------eEEEc------------------------CCCCEEEE
Confidence 46789999987 45555442 5789999999999873 33332 34689998
Q ss_pred EcCCCCCCCCCCeEEEEeeccccC--------------------------------------------------------
Q 002429 169 ILPKYASEAGENAILVSSHIDTVS-------------------------------------------------------- 192 (923)
Q Consensus 169 i~g~~~~~~~~~~vll~aH~DSv~-------------------------------------------------------- 192 (923)
++|+ .+.|+++||+|+|+
T Consensus 56 ~~g~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~ 129 (353)
T 1y0y_A 56 KKGE------GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPED 129 (353)
T ss_dssp ECCS------SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC----------
T ss_pred ecCC------CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhh
Confidence 8652 36899999999995
Q ss_pred --------------------------CCCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002429 193 --------------------------AGEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (923)
Q Consensus 193 --------------------------~spG--------------------A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~ 226 (923)
..+| |.||++|++++|++++.|++ ++++|+
T Consensus 130 ~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~ 205 (353)
T 1y0y_A 130 RKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVY 205 (353)
T ss_dssp ---CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEE
T ss_pred ccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEE
Confidence 2345 69999999999999999864 678999
Q ss_pred EEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCCCCc----------------cee---ecCCCHHHHHHHHHHh
Q 002429 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS----------------ALF---QAGPNLWAVENFAAVA 287 (923)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG~~----------------~lf---q~g~~~~li~~y~~~a 287 (923)
|+|+.+||.|+.||+.+... .+...+|++|+.+.++.. +-+ ....++.+.+..++++
T Consensus 206 ~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a 281 (353)
T 1y0y_A 206 FVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELA 281 (353)
T ss_dssp EEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHH
T ss_pred EEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHH
Confidence 99999999999999998742 235688999987653211 100 0112566666666544
Q ss_pred cCCCCcccccccccCCCCCCCCchHHh--hhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 002429 288 KYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (923)
Q Consensus 288 ~~p~~~~l~~e~f~~g~ips~TD~~~F--~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~ 365 (923)
+.. +.....+.. .+.+||...| .. .|+|.+++... . ..+||+. |.++.+.+.+..+.+..++..+++
T Consensus 282 ~~~-gi~~~~~~~----~~ggsDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 282 KKH-EIPYQLEIL----LGGGTDAGAIHLTK-AGVPTGALSVP-A-RYIHSNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp HHT-TCCEEEEEC----SSCCCTHHHHTTST-TCCCEEEEEEE-E-BSCSSSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred HHc-CCCEEEeec----CCCCchHHHHHHhC-CCCcEEEEccc-c-cccCCHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 221 211111111 3468999999 44 79999997643 2 2489975 677889999999999999988865
No 20
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.58 E-value=2e-14 Score=160.44 Aligned_cols=223 Identities=15% Similarity=0.246 Sum_probs=145.1
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 85 s~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
+.+++.+.|++|+++ |.+.|. ++++++||.+++++++. +++.+ +..|
T Consensus 4 ~~~~~~~~l~~lv~i-~s~s~~--e~~~~~~l~~~l~~~g~------~~~~d------------------------~~gn 50 (349)
T 2gre_A 4 HTKETMELIKELVSI-PSPSGN--TAKIINFIENYVSEWNV------ETKRN------------------------NKGA 50 (349)
T ss_dssp HHHHHHHHHHHHHTS-CCBTTC--CHHHHHHHHHHTTTSSS------EEEEC------------------------SSSC
T ss_pred cHHHHHHHHHHHHhC-CCCCcc--HHHHHHHHHHHHHHhCC------EEEEe------------------------cCCc
Confidence 357899999999997 444443 35689999999999873 33332 2358
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccC----------------C-----------------------------------
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVS----------------A----------------------------------- 193 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~----------------~----------------------------------- 193 (923)
|+++++|+ .+.+.|++++|+|+|+ .
T Consensus 51 l~a~~~g~----~~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h 126 (349)
T 2gre_A 51 LILTVKGK----NDAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVH 126 (349)
T ss_dssp EEEEECCS----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-----
T ss_pred EEEEecCC----CCCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCcc
Confidence 99999763 2346799999999983 0
Q ss_pred ----------------------------------CC---------------C-----CCCChhHHHHHHHHHHHHHhcCC
Q 002429 194 ----------------------------------GE---------------G-----AGDCSSCVAVMLELARVMSQWAH 219 (923)
Q Consensus 194 ----------------------------------sp---------------G-----A~Dd~sgva~mLE~ar~L~~~~~ 219 (923)
.+ | +.||++|++++|+++|.|.+.+.
T Consensus 127 ~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~ 206 (349)
T 2gre_A 127 VYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENV 206 (349)
T ss_dssp --------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTC
T ss_pred ccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccC
Confidence 00 1 69999999999999999998777
Q ss_pred CCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCCC-C-----cc-e-e--ecCC-CHHHHHHHHHHhc
Q 002429 220 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-R-----SA-L-F--QAGP-NLWAVENFAAVAK 288 (923)
Q Consensus 220 ~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG-~-----~~-l-f--q~g~-~~~li~~y~~~a~ 288 (923)
+++++|+|+|+.+||.|+.|++.+ ..+...++++|+.+.++ + .. + + +.++ ++.+.+.+++.++
T Consensus 207 ~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a~ 280 (349)
T 2gre_A 207 TLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAK 280 (349)
T ss_dssp CCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHH
T ss_pred CCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHHH
Confidence 788999999999999999999875 24578999999987653 2 11 1 1 1222 5667766655432
Q ss_pred CCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 002429 289 YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (923)
Q Consensus 289 ~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~ 361 (923)
.. +-....+.. ...+||+..|.. ..|+|.+++. .... .+|| .|.++.+.+....+.+..++.
T Consensus 281 ~~-gi~~q~~~~----~ggGsDa~~~~~~~~GiPt~~lg-~~~~-~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 281 TN-HIEYKVDIY----PYYGSDASAAIRAGFDVKHALIG-AGID-SSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp HH-TCCEEEEEC----SCC--------CCSSSCEEEEEE-ECCB-STTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred Hc-CCCcEEecc----CCCCccHHHHHHhCCCCcEEEec-cCcc-cccc----ceeccHHHHHHHHHHHHHHHh
Confidence 11 111111122 235799988842 3799999774 3333 3786 577888889888777776664
No 21
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.57 E-value=3.1e-14 Score=157.57 Aligned_cols=147 Identities=18% Similarity=0.185 Sum_probs=104.0
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCC-----------
Q 002429 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG----------- 265 (923)
Q Consensus 197 A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~g----------- 265 (923)
+.||++|+|++|+++|.|++.+ ++++|+|+|+++||.|+.|++.++.. .+...+|++|+.+..
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6999999999999999998753 67999999999999999999998732 245689999987653
Q ss_pred CCccee---ecCCCHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcC
Q 002429 266 GRSALF---QAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLD 342 (923)
Q Consensus 266 G~~~lf---q~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d 342 (923)
|..+-+ ....++.+.+...++++.. +...... ..+.+||...|.. |+|.+++... . ..+||+. |
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~~-gi~~~~~-----~~~ggtDa~~~~~--GiPtv~lg~~-~-~~~Hs~~---E 311 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEKN-GIEIQIG-----VTGGGTDASAFQD--RSKTLALSVP-I-KYLHSEV---E 311 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHHT-TCCCEEE-----ECSSCCGGGGGTT--TSEEEEEECE-E-BSCSSTT---C
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-CCCeEEe-----cCCCCchHHHHHc--CCCEEEEcCC-c-CCCCChh---h
Confidence 221111 1112566666666544321 2111111 1346899999986 9999987533 2 3489975 6
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 002429 343 LLKPGSLQHLGENMLDFLLQ 362 (923)
Q Consensus 343 ~i~~~slq~~g~~vl~lv~~ 362 (923)
+++.+.++...+.+..++..
T Consensus 312 ~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 312 TLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EEEHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHh
Confidence 77788999988888887765
No 22
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.48 E-value=1.3e-13 Score=153.15 Aligned_cols=219 Identities=17% Similarity=0.216 Sum_probs=136.8
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcC
Q 002429 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (923)
Q Consensus 92 ~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g 171 (923)
.|++|+++ |.+.|.+ +++++||.+++++++. +++.| +..|++++++|
T Consensus 3 ~l~~L~~~-~s~sg~e--~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~~~g 49 (340)
T 2fvg_A 3 YLKELSMM-PGVSGDE--GKVRDFIKSKIEGLVD------NLYTD------------------------VLGNLIALKRG 49 (340)
T ss_dssp CHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEEEEECC
T ss_pred HHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------CCCcEEEEecC
Confidence 36788886 4555543 4689999999999973 33332 23589999876
Q ss_pred CCCCCCCCCeEEEEeeccccC-----------------------------------------------------------
Q 002429 172 KYASEAGENAILVSSHIDTVS----------------------------------------------------------- 192 (923)
Q Consensus 172 ~~~~~~~~~~vll~aH~DSv~----------------------------------------------------------- 192 (923)
+ .+.+.|+++||+|+|+
T Consensus 50 ~----~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~ 125 (340)
T 2fvg_A 50 R----DSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFEN 125 (340)
T ss_dssp S----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTT
T ss_pred C----CCCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCccc
Confidence 3 2346899999999998
Q ss_pred ----------------CCCC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC
Q 002429 193 ----------------AGEG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (923)
Q Consensus 193 ----------------~spG-------------------A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl 237 (923)
..+| +.||++|++++|+++|.|. +++++|+|+|+++||.|+
T Consensus 126 l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~ 201 (340)
T 2fvg_A 126 LRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGL 201 (340)
T ss_dssp EEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC---
T ss_pred EEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccch
Confidence 1114 6999999999999999886 477899999999999999
Q ss_pred cChHHHHhcCCCcCCceEEEEeecCcCC---CCc-----------ceee---cC--CCHHHHHHHHHHhcCCCCcccccc
Q 002429 238 NGAHSFVTQHPWSTTIRVAVDLEAMGIG---GRS-----------ALFQ---AG--PNLWAVENFAAVAKYPSGQIIGQD 298 (923)
Q Consensus 238 ~GS~~f~~~h~~~~~v~a~iNlD~~G~g---G~~-----------~lfq---~g--~~~~li~~y~~~a~~p~~~~l~~e 298 (923)
.|++.++++ .+...+|++|+.+.+ |+. .+.. .+ .++.+.+..++.++. .+.....+
T Consensus 202 ~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~-~gi~~~~~ 276 (340)
T 2fvg_A 202 RGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKN-NDIPFQMK 276 (340)
T ss_dssp --CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHH-TTCCCEEC
T ss_pred hhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCeEEE
Confidence 999999853 234678999876532 211 0011 11 145555555544321 11111111
Q ss_pred cccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 002429 299 LFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (923)
Q Consensus 299 ~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~ 365 (923)
. ..+.+||...|.. ..|+|.+.+... ..+ +||+. |+++.+.+++..+.+..++..+.+
T Consensus 277 ~----~~~ggtDa~~~~~~~~GiP~v~~g~~-~~~-~Hs~~---E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 277 R----RTAGGTDAGRYARTAYGVPAGVISTP-ARY-IHSPN---SIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp C----CC-------------CCSCEEEEEEE-EEE-SSTTC---EEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred e----cCCCCccHHHHHhhCCCCcEEEeccc-ccc-cCChh---hcccHHHHHHHHHHHHHHHHhccc
Confidence 1 1346899999974 269999977543 233 89986 567789999999999999988765
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.43 E-value=1.2e-12 Score=148.62 Aligned_cols=129 Identities=19% Similarity=0.183 Sum_probs=107.3
Q ss_pred CCHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (923)
Q Consensus 84 fs~erA~~~L~~L~~igp-------r~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~ 156 (923)
.+.+|+++.|++|++++. |+..|.++.++++||.++|++++ ++++.|
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g------~~~~~d-------------------- 55 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAG------LFVYED-------------------- 55 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEC--------------------
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCC------CEEEEc--------------------
Confidence 357899999999999854 33458888899999999999998 334332
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-
Q 002429 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (923)
Q Consensus 157 ~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~- 235 (923)
...||+++++|+ .++.+.|+++||+|+||. .|+.|++.|++++|++++.|.+.+.+++++|.|+|+.+||.
T Consensus 56 ----~~gnv~a~~~g~---~~~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~ 127 (408)
T 3n5f_A 56 ----AAGNLIGRKEGT---NPDATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGA 127 (408)
T ss_dssp ----TTCCEEEEECCS---STTSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCT
T ss_pred ----CCCCEEEEecCC---CCCCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcccc
Confidence 234999999885 234689999999999994 68999999999999999999998778999999999999996
Q ss_pred ----CCcChHHHHhc
Q 002429 236 ----GLNGAHSFVTQ 246 (923)
Q Consensus 236 ----gl~GS~~f~~~ 246 (923)
|+.||+.++.+
T Consensus 128 ~~~~g~~Gs~~~~~~ 142 (408)
T 3n5f_A 128 RFRFGMIGSRAMAGT 142 (408)
T ss_dssp TTTCCCHHHHHHHTC
T ss_pred ccCCCCcCHHHHHcC
Confidence 78899999843
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.43 E-value=2.5e-12 Score=148.86 Aligned_cols=155 Identities=14% Similarity=0.157 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCH----HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHAVGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~----~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
.+++.+.+++|.++ |.+.+.+ +..++++||.++|++++ ++++.+..... ...+ +. ....
T Consensus 19 ~~~~~~~l~~l~~~-ps~s~~e~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~----~~~~----~~--~~~~ 81 (479)
T 2zog_A 19 QDRYVKKLAEWVAI-QSVSAWPEKRGEIRRMMEVAAADVQRLG------GSVELVDIGKQ----KLPD----GS--EIPL 81 (479)
T ss_dssp HHHHHHHHHHHHHS-CCBTTCGGGHHHHHHHHHHHHHHHHHTT------CEEEEECCCEE----ECTT----SC--EEEC
T ss_pred HHHHHHHHHHHhcC-CCccCCcccchHHHHHHHHHHHHHHHcC------CeEEEeecccc----ccCC----Cc--ccCC
Confidence 46889999999997 4444443 34689999999999998 34444321100 0000 00 0001
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~ 220 (923)
..||++++++. .+.+.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+.+
T Consensus 82 ~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~ 157 (479)
T 2zog_A 82 PPILLGKLGSD----PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQE 157 (479)
T ss_dssp CCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEecCC----CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCC
Confidence 27999999652 34578999999999975 378899999999999999999998778
Q ss_pred CCCcEEEEEeCCCCCCCcChHHHHhcCCC--cCCceEEEEeec
Q 002429 221 FKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEA 261 (923)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~h~~--~~~v~a~iNlD~ 261 (923)
++++|+|+|+.+||.|..|++.+++++.. ..++.+++++|.
T Consensus 158 ~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 158 IPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp CSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred CCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 88999999999999999999999977642 245778888885
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.38 E-value=3.2e-12 Score=144.30 Aligned_cols=146 Identities=21% Similarity=0.290 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHH-HHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDA-LDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~-n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
.+++.+.|++|.+| |.+.+.++ ..++++||.++++++| ++++.+.... . ....|
T Consensus 18 ~~~~~~~l~~lv~i-~s~s~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~-------------~-----~~~~~ 72 (393)
T 1cg2_A 18 QPAVIKTLEKLVNI-ETGTGDAEGIAAAGNFLEAELKNLG------FTVTRSKSAG-------------L-----VVGDN 72 (393)
T ss_dssp HHHHHHHHHHHHTS-CCBTTCHHHHHHHHHHHHHHHHHTT------CEEEEEECST-------------T-----CCSEE
T ss_pred HHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHcC------CeEEEEecCc-------------C-----CCCCe
Confidence 46889999999998 44555543 4689999999999998 3444332100 0 01359
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~-----------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~f 227 (923)
|+++++|+ . .+.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+.+++++|+|
T Consensus 73 v~a~~~g~----~-~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~ 147 (393)
T 1cg2_A 73 IVGKIKGR----G-GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITV 147 (393)
T ss_dssp EEEEEECS----S-CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEE
T ss_pred EEEEECCC----C-CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 99999763 1 368999999999974 3899999999999999999999977777789999
Q ss_pred EEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCc
Q 002429 228 LFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 228 lf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
+|..+||.|..|++.+++++. .++.+++++|..+
T Consensus 148 ~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 148 LFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp EEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 999999999999999986532 2467788888553
No 26
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.36 E-value=3.5e-12 Score=147.97 Aligned_cols=145 Identities=16% Similarity=0.229 Sum_probs=111.2
Q ss_pred HH-HHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccc
Q 002429 86 EL-EAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (923)
Q Consensus 86 ~e-rA~~~L~~L~~igpr~~GS-~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~ 163 (923)
.+ ++++.+++|.++. .+.+. .+..++++||.+++++++ ++++.+. . .+..
T Consensus 42 ~~~~~~~~l~~l~~ip-s~s~~e~~~~~~~~~l~~~l~~~G------~~~~~~~--~-------------------~~~~ 93 (481)
T 2pok_A 42 VAQHYFEVLRTLISKK-SVFAQQVGLKEVANYLGEIFKRVG------AEVEIDE--S-------------------YTAP 93 (481)
T ss_dssp HHHHHHHHHHHHHHSC-CCGGGCTTHHHHHHHHHHHHHHTT------CEEEEEC--S-------------------SSSC
T ss_pred hhHHHHHHHHHHHcCC-CcCCCCHHHHHHHHHHHHHHHHcC------CEEEEec--C-------------------CCCc
Confidence 45 7889999999973 33332 344789999999999998 3344321 0 0357
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 002429 164 HIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFK 222 (923)
Q Consensus 164 NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~ 222 (923)
||+++++|+ ..+.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+..++
T Consensus 94 ~v~a~~~g~---~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~ 170 (481)
T 2pok_A 94 FVMAHFKSS---RPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLP 170 (481)
T ss_dssp EEEEEECCS---STTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCS
T ss_pred EEEEEecCC---CCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 999999863 134578999999999974 37899999999999999999998755788
Q ss_pred CcEEEEEeCCCCCCCcChHHHHhcCCC-cCCceEEEEeec
Q 002429 223 NAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEA 261 (923)
Q Consensus 223 ~~I~flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~iNlD~ 261 (923)
++|+|+|+.+||.|..|++.+++++.. .++..++++.|.
T Consensus 171 ~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~ 210 (481)
T 2pok_A 171 VNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQG 210 (481)
T ss_dssp SEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCC
T ss_pred CCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCC
Confidence 999999999999999999999865421 122566777764
No 27
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=1.2e-11 Score=138.21 Aligned_cols=135 Identities=22% Similarity=0.266 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.+++|.++ |.+.+ ++.++++||.+++++++. +++.+ ..|+
T Consensus 10 ~~~~~~~~~~l~~~-ps~s~--~e~~~~~~l~~~l~~~g~------~~~~~-------------------------~~nv 55 (356)
T 3ct9_A 10 TAEAVSLLKSLISI-PSISR--EETQAADFLQNYIEAEGM------QTGRK-------------------------GNNV 55 (356)
T ss_dssp HHHHHHHHHHHHTS-CCBTT--CCHHHHHHHHHHHHHTTC------CEEEE-------------------------TTEE
T ss_pred HHHHHHHHHHHhcC-CCCCC--ChHHHHHHHHHHHHHCCC------eEEEE-------------------------eeeE
Confidence 35788899999987 44444 335788999999999983 33321 3689
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~ 226 (923)
+++++|+ +.+.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+ ++++|+
T Consensus 56 ~a~~~g~---~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~ 130 (356)
T 3ct9_A 56 WCLSPMF---DLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLI 130 (356)
T ss_dssp EEECSSC---CTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEE
T ss_pred EEEEecC---CCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEE
Confidence 9999762 134578999999999975 4788899999999999999999865 789999
Q ss_pred EEEeCCCCC-CCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 227 FLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 227 flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
|+|+.+||. |+.|++.++++.. +...+++.|..
T Consensus 131 ~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 131 YLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp EEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 999999998 8999999997652 34567777754
No 28
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.33 E-value=5.5e-12 Score=144.54 Aligned_cols=139 Identities=12% Similarity=0.158 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHcCCCCCCC--------CHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~G--------S~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~ 158 (923)
+|+++.|++|++|. .+.+ ++++.++++||.++++++|.+ ++++|
T Consensus 27 ~~~~~~l~~lv~i~-s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~-----~~~~d---------------------- 78 (434)
T 3ife_A 27 EELIERFTRYVKID-TQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLT-----EVTMD---------------------- 78 (434)
T ss_dssp HHHHHHHHHHHTSC-CBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCE-----EEEEC----------------------
T ss_pred HHHHHHHHhhEEee-ccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCc-----eEEEC----------------------
Confidence 57889999999984 3333 346679999999999999831 13332
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCC--------------------------------------------
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------------------------------------- 194 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s-------------------------------------------- 194 (923)
+..||+++++|+. ..+.+.|++++|+|+||..
T Consensus 79 --~~~nv~a~~~g~~--~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~ 154 (434)
T 3ife_A 79 --DNGYVMATLPANT--DKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTI 154 (434)
T ss_dssp --TTSCEEEEECCBS--SSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCE
T ss_pred --CCcEEEEEeCCCC--CCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcE
Confidence 3468999998751 1245789999999999751
Q ss_pred ---CC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeec
Q 002429 195 ---EG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 195 ---pG----A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
+| +.||+.|+|++|++++.|.+.+..++++|.|+|..+||.| .|++.+..+. -++.+++++|.
T Consensus 155 i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~---~~~d~~~~~d~ 224 (434)
T 3ife_A 155 ITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA---FGASFAYMMDG 224 (434)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH---HCCSEEEECCC
T ss_pred EECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh---cCCCEEEEecC
Confidence 13 4899999999999999999887788999999999999998 8988864221 14677888874
No 29
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.32 E-value=2.6e-11 Score=140.99 Aligned_cols=156 Identities=14% Similarity=0.153 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHcCCCCC--CCCH----HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHA--VGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~--~GS~----~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y 159 (923)
.++..+.+++|.++ |-+ .+.+ +..++.+||.++|+++|. +++.+.... ..... +. .+
T Consensus 24 ~~~~i~~l~~lv~i-ps~~~s~~~~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~~----~~~~~----g~--~~ 86 (485)
T 3dlj_A 24 QDEFVQTLKEWVAI-ESDSVQPVPRFRQELFRMMAVAADTLQRLGA------RVASVDMGP----QQLPD----GQ--SL 86 (485)
T ss_dssp HHHHHHHHHHHHTS-CCBSSSCCHHHHHHHHHHHHHHHHHHHHTTC------EEEEECCCE----EEC------CC--EE
T ss_pred HHHHHHHHHHHhcC-CCccCCCCccccHHHHHHHHHHHHHHHHcCC------eEEEEecCc----ccccC----CC--cc
Confidence 46788999999997 444 4442 245899999999999983 343321100 00000 00 00
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 002429 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (923)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~ 218 (923)
....||++++.+. .+.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+
T Consensus 87 ~~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~ 162 (485)
T 3dlj_A 87 PIPPVILAELGSD----PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE 162 (485)
T ss_dssp ECCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEECCC----CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhC
Confidence 0146899998652 35678999999999985 3899999999999999999999987
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhcCCC--cCCceEEEEeecC
Q 002429 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAM 262 (923)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~--~~~v~a~iNlD~~ 262 (923)
.+++.+|.|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 163 ~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 163 QDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp CCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 7889999999999999999999999977643 3578888988853
No 30
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.30 E-value=1.6e-11 Score=140.23 Aligned_cols=158 Identities=15% Similarity=0.075 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccc-cccccceE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL-IYSDLNHI 165 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~-~Y~~~~NV 165 (923)
+++.+.+++|.++ |.+. .++.++++||.++|+++|. +++....... ......+ +..... ...+..||
T Consensus 26 ~~~~~~l~~l~~~-ps~s--~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~v 93 (433)
T 3pfo_A 26 NDQVAFLQRMVQF-RSVR--GEEAPQQEWLAQQFADRGY------KVDTFSLADV-DIASHPK--AAPMDTIDPAGSMQV 93 (433)
T ss_dssp HHHHHHHHHHHTS-CCBT--TCCHHHHHHHHHHHHHTTC------EEEEEETGGG-TGGGSTT--CCCCTTCCGGGCEEE
T ss_pred HHHHHHHHHHhcC-CCCC--CCHHHHHHHHHHHHHHCCC------ceEEEecchh-hhhcccc--ccccccccCCCCcEE
Confidence 5788889999986 3333 3446899999999999983 3333211100 0000000 000000 12356899
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~s---------------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
+++++|+ .+.+.|++.+|+|+||.. +|+.||++|+|++|++++.|.+.+.+++++
T Consensus 94 ia~~~g~----~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 169 (433)
T 3pfo_A 94 VATADSD----GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDAR 169 (433)
T ss_dssp EEEECCC----CCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred EEEEecC----CCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCcc
Confidence 9999873 356789999999999853 599999999999999999999877678899
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCc
Q 002429 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
|.|+|..+||.|..|++.++++. .+..++++.|..+
T Consensus 170 v~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 170 VHVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp EEEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred EEEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 99999999999889999998543 2567788887543
No 31
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.27 E-value=1.8e-11 Score=137.07 Aligned_cols=148 Identities=20% Similarity=0.286 Sum_probs=110.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccc
Q 002429 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (923)
Q Consensus 84 fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~ 163 (923)
++.+++++.|++|.++ |.+ |.++.++++||.++|++++ ++++.+.... ....+..
T Consensus 3 ~~~~~~~~~l~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G------~~v~~~~~~~----------------~~~~~~~ 57 (373)
T 3gb0_A 3 INQERLVNEFMELVQV-DSE--TKFEAEICKVLTKKFTDLG------VEVFEDDTMA----------------VTGHGAG 57 (373)
T ss_dssp SCHHHHHHHHHHHHTS-CCB--TTCCHHHHHHHHHHHHHTT------CEEEECSCHH----------------HHCCSSC
T ss_pred CCHHHHHHHHHHHhcc-cCC--CccHHHHHHHHHHHHHHCC------CEEEEecccc----------------ccCCCce
Confidence 5788999999999997 333 3445789999999999998 3444332100 0011357
Q ss_pred eEEEEEcCCCCCCCCCCeEEEEeeccccCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 164 HIVLRILPKYASEAGENAILVSSHIDTVSA--------------GEGA----GDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 164 NVi~~i~g~~~~~~~~~~vll~aH~DSv~~--------------spGA----~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
||+++++|+ ..+.+.|++.+|+|+||. ++|+ .||+.|++++|++++.|.+.+. ++++|
T Consensus 58 nv~a~~~g~---~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v 133 (373)
T 3gb0_A 58 NLICTLPAT---KDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTI 133 (373)
T ss_dssp CEEEEECCS---STTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCE
T ss_pred eEEEEecCC---CCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCE
Confidence 999999874 235678999999999974 3576 5999999999999999998754 67899
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCc
Q 002429 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (923)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G 263 (923)
.|+|..+||.|..|++.+..+. .+....+++|..+
T Consensus 134 ~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 168 (373)
T 3gb0_A 134 EFIITVGEESGLVGAKALDRER---ITAKYGYALDSDG 168 (373)
T ss_dssp EEEEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECS
T ss_pred EEEEEeccccCchhhhhhCHHh---cCCCEEEEEcCCC
Confidence 9999999999999999886322 2345666776543
No 32
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.27 E-value=2.2e-11 Score=141.34 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=104.7
Q ss_pred CCCHHHHHHHHHHH-HcCCCC--------------CCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccc
Q 002429 83 GFSELEAMKHVKAL-TQLGPH--------------AVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRV 147 (923)
Q Consensus 83 ~fs~erA~~~L~~L-~~igpr--------------~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~ 147 (923)
+.+.+++++.|++| ++|+.. +..|.++.++++||.++++++| ++++.+
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G------~~v~~d----------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLG------CKVKVD----------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTT------CEEEEB-----------
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcC------CEEEEe-----------
Confidence 46678999999999 998432 2336777899999999999998 333321
Q ss_pred cccccccccccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 002429 148 GTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (923)
Q Consensus 148 ~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~f 227 (923)
+..||+++++|+ .+.+.|++.+|+|+||.. |..|++.|++++|++++.|.+.+.+++++|+|
T Consensus 91 -------------~~gnvia~~~g~----~~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~l 152 (474)
T 2v8h_A 91 -------------KIGNMFAVYPGK----NGGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCV 152 (474)
T ss_dssp -------------TTCCEEEEECCS----SCCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -------------cCceEEEEECCC----CCCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 234899999874 233489999999999964 77899999999999999999988888999999
Q ss_pred EEeCCCCC-----CCcChHHHHh
Q 002429 228 LFNTGEEE-----GLNGAHSFVT 245 (923)
Q Consensus 228 lf~~~EE~-----gl~GS~~f~~ 245 (923)
+|+.+||. |+.||+.+..
T Consensus 153 if~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 153 VVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEECCccCCCCCCCcccHHHHHh
Confidence 99999998 7789999974
No 33
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.27 E-value=2.2e-11 Score=136.07 Aligned_cols=139 Identities=22% Similarity=0.221 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.+++|.++ |-+.+ ++.++++||.++|+++|.+ .++++. ...|++
T Consensus 13 ~~~~~~~~~l~~~-ps~s~--~e~~~~~~l~~~l~~~G~~-----~~~~~~-----------------------~~~~~~ 61 (369)
T 3tx8_A 13 GDPIVLTQRLVDI-PSPSG--QEKQIADEIEDALRNLNLP-----GVEVFR-----------------------FNNNVL 61 (369)
T ss_dssp SCHHHHHHHHHSS-CCBTT--CTHHHHHHHHHHHHTTTCT-----TCEEEE-----------------------ETTEEE
T ss_pred HHHHHHHHHHhcC-CCCCc--cHHHHHHHHHHHHHhcCCC-----CcEEec-----------------------cCCcEE
Confidence 3678899999986 33433 4468899999999999731 122221 235899
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~--------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~ 232 (923)
++++++ +.+.|++.+|+|+||. ++|+.||++|+|++|++++.|++. ..++++|+|+|..+
T Consensus 62 a~~~~~-----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~ 135 (369)
T 3tx8_A 62 ARTNRG-----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYEC 135 (369)
T ss_dssp EECCCC-----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECC
T ss_pred EEecCC-----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEec
Confidence 998763 3578999999999986 389999999999999999999863 46789999999999
Q ss_pred CCCCC--cChHHHHhcCCCcCCceEEEEeecC
Q 002429 233 EEEGL--NGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 233 EE~gl--~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
||.|. .|++.++++++...+...+++.|..
T Consensus 136 EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 136 EEVADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp CSSCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred cccCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 99987 7999999877433345677777643
No 34
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.25 E-value=2.7e-11 Score=137.90 Aligned_cols=126 Identities=16% Similarity=0.081 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHcCCCCC-------CCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHA-------VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~-------~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~ 158 (923)
.+++++.|++|++|+... ..|.++.++++||.++++++| ++++.+
T Consensus 8 ~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G------~~v~~~---------------------- 59 (423)
T 1z2l_A 8 RQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASG------LETRFD---------------------- 59 (423)
T ss_dssp HHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEC----------------------
T ss_pred HHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcC------CEEEEe----------------------
Confidence 478999999999985322 123566789999999999998 333321
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC---
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE--- 235 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~--- 235 (923)
...||+++++|+ .+..+.|++.+|+|+||. .|..|++.|++++|++++.|++.+.+++++|+|+|+.+||.
T Consensus 60 --~~gnv~a~~~g~---~~~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~ 133 (423)
T 1z2l_A 60 --EVGNLYGRLNGT---EYPQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRF 133 (423)
T ss_dssp --TTSCEEEEECCS---SEEEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSS
T ss_pred --cCCcEEEEEcCC---CCCCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcccccc
Confidence 224899999874 123478999999999995 48899999999999999999987778899999999999997
Q ss_pred --CCcChHHHHh
Q 002429 236 --GLNGAHSFVT 245 (923)
Q Consensus 236 --gl~GS~~f~~ 245 (923)
|+.||+.+..
T Consensus 134 ~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 134 PYVFWGSKNIFG 145 (423)
T ss_dssp SCSCHHHHHHTT
T ss_pred CCCcccHHHHHc
Confidence 5679999885
No 35
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.21 E-value=2.8e-10 Score=126.41 Aligned_cols=226 Identities=14% Similarity=0.185 Sum_probs=147.6
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
+..+.|++|+++ |.+.|. ++.+++||.+++++++. ++++| +..|+++
T Consensus 6 ~~~~~l~~Lv~~-~s~sg~--e~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia 52 (346)
T 1vho_A 6 ETGKLLMELSNL-DGPSGY--ETNVVSYIKSVIEPFVD------EAKTT------------------------RHGSLIG 52 (346)
T ss_dssp CHHHHHHHHHHS-CCBTTC--CHHHHHHHHHHHGGGCS------EEEEC------------------------TTSCEEE
T ss_pred HHHHHHHHHHcC-CCCCcc--hHHHHHHHHHHHHhhCC------EEEEe------------------------cCCcEEE
Confidence 457789999997 445553 35689999999999983 33332 3358999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccCC---------------------------------C--------------------
Q 002429 168 RILPKYASEAGENAILVSSHIDTVSA---------------------------------G-------------------- 194 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~~---------------------------------s-------------------- 194 (923)
+++|+ ..+.|+++||+|+|+. .
T Consensus 53 ~~~g~-----~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~ 127 (346)
T 1vho_A 53 YKKGK-----GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESR 127 (346)
T ss_dssp EECCS-----SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHH
T ss_pred EEcCC-----CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhc
Confidence 98763 2367999999999941 0
Q ss_pred ---------------------CC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 002429 195 ---------------------EG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (923)
Q Consensus 195 ---------------------pG-------------------A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE 234 (923)
.| +.||+.|+++++++++.+.+.+ ++.+++++|+.+||
T Consensus 128 ~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EE 205 (346)
T 1vho_A 128 KKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEE 205 (346)
T ss_dssp HTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTS
T ss_pred ccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcc
Confidence 11 4799999999999999997643 56899999999999
Q ss_pred CCCcChHHHHhcCCCcCCceEEEEeecCcCCCCc----------ceee--cCCCHHHHHHHHHHhcCCCCcccccccccC
Q 002429 235 EGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS----------ALFQ--AGPNLWAVENFAAVAKYPSGQIIGQDLFAS 302 (923)
Q Consensus 235 ~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG~~----------~lfq--~g~~~~li~~y~~~a~~p~~~~l~~e~f~~ 302 (923)
.|+.|++.... .. +...++.+|....+... .... ...++.+++...++++. .+.........
T Consensus 206 vG~~Ga~~~~~--~i--~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~-~gi~~~~~~~~- 279 (346)
T 1vho_A 206 TGCLGALTGAY--EI--NPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKK-HNVSLQEEAVG- 279 (346)
T ss_dssp SSHHHHHHTTC--CC--CCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHH-TTCCCEEESSC-
T ss_pred cchhhHHHHhc--cc--CCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHH-CCCCEEEEeCC-
Confidence 99999886442 22 23456778876654210 0111 11356666666554432 12111111111
Q ss_pred CCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 303 GVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 303 g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
| +++||...+.. ..|+|.+++.-- .. ..|++ .|.++.+.+....+.+..++..++..
T Consensus 280 g--~ggsDa~~~~~~~~gipt~~lg~~-~~-~~Hs~---~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 280 G--RSGTETDFVQLVRNGVRTSLISIP-LK-YMHTP---VEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp C--C----CTTHHHHHTTCEEEEEEEE-CB-STTST---TEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred C--CCCchHHHHHHhCCCCcEEEEehh-hc-ccccH---HHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 0 15799888842 379999986543 33 37987 45778999999999999999887653
No 36
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.21 E-value=4.4e-11 Score=133.89 Aligned_cols=138 Identities=21% Similarity=0.239 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCH-HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccce
Q 002429 86 ELEAMKHVKALTQLGPHAVGSD-ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~-~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~N 164 (923)
.+++.+.+++|.++ |.+...+ ++.++.+||.++|++++. +++.+ ..|
T Consensus 5 ~~~~~~~l~~l~~i-ps~s~~~~~e~~~~~~l~~~l~~~G~------~~~~~-------------------------~~~ 52 (364)
T 2rb7_A 5 MQHIVELTSDLIRF-PSMHSRPEQISRCAGFIMDWCAQNGI------HAERM-------------------------DHD 52 (364)
T ss_dssp HHHHHHHHHHHHTS-CCCTTCHHHHHHHHHHHHHHHHHTTC------CCEEE-------------------------EET
T ss_pred HHHHHHHHHHHHcC-CCCCCCcchHHHHHHHHHHHHHHcCC------eEEEe-------------------------cCC
Confidence 56889999999997 3333333 445899999999999983 23221 135
Q ss_pred EEEEEcCCCCCCCCCCeEEEEeeccccCC---------------CCCCCCChhHHHHHHHHHHHHHhcCCCC---CCc--
Q 002429 165 IVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGAGDCSSCVAVMLELARVMSQWAHEF---KNA-- 224 (923)
Q Consensus 165 Vi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------spGA~Dd~sgva~mLE~ar~L~~~~~~p---~~~-- 224 (923)
++++++++. ..+.+.|++.+|+|+||. ++|+.|++.|++++|++++.|.+.+.++ +++
T Consensus 53 ~~~~~~~~~--~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~ 130 (364)
T 2rb7_A 53 GIPSVMVLP--EKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMA 130 (364)
T ss_dssp TEEEEEECS--BTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred CceEEEEEc--CCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCcc
Confidence 667776521 124578999999999985 4789999999999999999999865455 457
Q ss_pred EEEEEeCCCCC-CCcChHHHHhcCCCcCCceEEEEeec
Q 002429 225 VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEA 261 (923)
Q Consensus 225 I~flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNlD~ 261 (923)
|+|+|+.+||. |+.|++.++++. +..+.+++|.
T Consensus 131 v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 131 LGLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp EEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred EEEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 99999999996 679999998654 4567777663
No 37
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.19 E-value=2.5e-10 Score=131.73 Aligned_cols=126 Identities=17% Similarity=0.196 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCH----------HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHAVGSD----------ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGK 155 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~----------~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~ 155 (923)
.+++++.+++|.++ |.+.+.+ +..++.+||.++++++| ++++..
T Consensus 13 ~~~~~~~l~~l~~i-ps~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G------~~~~~~------------------- 66 (470)
T 1lfw_A 13 KDAILKDLEELIAI-DSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDG------FDTENF------------------- 66 (470)
T ss_dssp HHHHHHHHHHHHTS-CCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEEE-------------------
T ss_pred HHHHHHHHHHHcCC-CCcCCCccccccCCCcHHHHHHHHHHHHHHHHcC------CeEEEe-------------------
Confidence 56899999999997 4444432 34689999999999998 233210
Q ss_pred cccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC--------------------CCCCCCChhHHHHHHHHHHHHH
Q 002429 156 TLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMS 215 (923)
Q Consensus 156 ~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~--------------------spGA~Dd~sgva~mLE~ar~L~ 215 (923)
+..++++++ |+ ..+.|++.+|+|+||. ++|+.||+.|++++|++++.|+
T Consensus 67 -----~~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~ 135 (470)
T 1lfw_A 67 -----ANYAGRVNF-GA-----GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLK 135 (470)
T ss_dssp -----TTTEEEEEE-CC-----CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHH
T ss_pred -----cCeEEEEEe-CC-----CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHH
Confidence 113466666 52 2478999999999973 3678999999999999999999
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 002429 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (923)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~ 248 (923)
+.+.+++++|+|+|+.+||.|..|++.+++++.
T Consensus 136 ~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 136 EAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp HHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred HcCCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 887788999999999999999999999997654
No 38
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.19 E-value=7.2e-11 Score=133.27 Aligned_cols=141 Identities=19% Similarity=0.246 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.+++|.++ |.+. .++.++++||.++|+++| ++++.... .+..||
T Consensus 5 ~~~~~~~l~~lv~~-ps~s--~~e~~~~~~l~~~l~~~G------~~~~~~~~---------------------~~~~nv 54 (393)
T 1vgy_A 5 ETQSLELAKELISR-PSVT--PDDRDCQKLMAERLHKIG------FAAEEMHF---------------------GNTKNI 54 (393)
T ss_dssp CSHHHHHHHHHHTS-CCBT--TCCTTHHHHHHHHHHTTT------CEEEECCB---------------------TTBCEE
T ss_pred hHHHHHHHHHHhcC-CCCC--CCcHHHHHHHHHHHHHcC------CcEEEEec---------------------CCCcEE
Confidence 35789999999986 3333 333568999999999998 33332110 145799
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
++++ |+ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.+++++
T Consensus 55 ~a~~-g~-----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~ 128 (393)
T 1vgy_A 55 WLRR-GT-----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGS 128 (393)
T ss_dssp EEEE-CS-----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSE
T ss_pred EEEE-CC-----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCc
Confidence 9998 53 2478999999999985 3688899999999999999999877778999
Q ss_pred EEEEEeCCCCCC-CcChHHHHhcCCC-cCCceEEEEeecC
Q 002429 225 VIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAVDLEAM 262 (923)
Q Consensus 225 I~flf~~~EE~g-l~GS~~f~~~h~~-~~~v~a~iNlD~~ 262 (923)
|+|+|+.+||.+ +.|++.+++.... ..++.+++..|..
T Consensus 129 v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 129 IALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred EEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 999999999974 6899988753211 1235566665543
No 39
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.18 E-value=4.8e-11 Score=135.77 Aligned_cols=137 Identities=16% Similarity=0.191 Sum_probs=103.0
Q ss_pred HHHHHHHHHHcCCCCCCC--------CHHHHHHHHHHHHHHHhcccccCCcce-EEEEeeeccCCCcccccccccccccc
Q 002429 88 EAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFKGKTLI 158 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~G--------S~~n~~a~~yL~~~l~~i~~~~~~~~~-ve~d~~~~~~g~~~~~~~~~~~~~~~ 158 (923)
++++.|++|+++. .+.+ ++++.++++||.++|++++. + ++.+
T Consensus 3 ~~~~~l~~Lv~i~-s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~------~~~~~~---------------------- 53 (417)
T 1fno_A 3 KLLERFLHYVSLD-TQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGL------VNITLS---------------------- 53 (417)
T ss_dssp SHHHHHHHHHTSC-CBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTC------EEEEEC----------------------
T ss_pred HHHHHHHHhEEec-CCCCcccCCCCCCccHHHHHHHHHHHHHHcCC------CeEEEC----------------------
Confidence 5788899999874 2333 23567899999999999983 2 3221
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCCC--------------------------------------------
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------------------------------------- 194 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s-------------------------------------------- 194 (923)
+..||+++++|+. ..+.+.|++.+|+|+||..
T Consensus 54 --~~~nvia~~~g~~--~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l 129 (417)
T 1fno_A 54 --EKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLI 129 (417)
T ss_dssp --TTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEE
T ss_pred --CCceEEEEECCCC--CCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEE
Confidence 2368999998741 1135789999999999742
Q ss_pred --CCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 195 --EGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 195 --pGA----~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
+|+ .||+.|+|++|++++.|++.+ .++++|+|+|+.+||.| .|++.+..+. . +....+++|..
T Consensus 130 ~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 130 TTDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred EcCCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 133 899999999999999999876 67899999999999998 8998776321 1 35567777754
No 40
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.18 E-value=2.4e-10 Score=126.80 Aligned_cols=217 Identities=18% Similarity=0.237 Sum_probs=147.6
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEc
Q 002429 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (923)
Q Consensus 91 ~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~ 170 (923)
+.|++|+++ |.+.|.+ +++++||.+++++++. ++++| +..|++++++
T Consensus 7 ~~l~~Lv~~-~s~sg~e--~~~~~~l~~~l~~~g~------~v~~d------------------------~~gnlia~~~ 53 (348)
T 1ylo_A 7 SLLKALSEA-DAIASSE--QEVRQILLEEAARLQK------EVRFD------------------------GLGSVLIRLN 53 (348)
T ss_dssp HHHHHHHHS-CCBTTBC--HHHHHHHHHHHHHTTC------CEEEC------------------------TTCCEEEECC
T ss_pred HHHHHHHcC-CCCCCch--HHHHHHHHHHHHhhCC------EEEEe------------------------cCCCEEEEec
Confidence 678899987 4455543 4689999999999883 33332 2358999887
Q ss_pred CCCCCCCCCCeEEEEeeccccC----------------------------------------------------------
Q 002429 171 PKYASEAGENAILVSSHIDTVS---------------------------------------------------------- 192 (923)
Q Consensus 171 g~~~~~~~~~~vll~aH~DSv~---------------------------------------------------------- 192 (923)
|+ ..+.|+++||+|+|+
T Consensus 54 g~-----~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~i 128 (348)
T 1ylo_A 54 ES-----TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRV 128 (348)
T ss_dssp CC-----SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEE
T ss_pred CC-----CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEE
Confidence 63 246799999999995
Q ss_pred --------------CCCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc
Q 002429 193 --------------AGEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN 238 (923)
Q Consensus 193 --------------~spG--------------------A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~ 238 (923)
...| +.||+.|+++++++++.+.+. .++.+++++|+.+||.|+.
T Consensus 129 d~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~~ 206 (348)
T 1ylo_A 129 DIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLR 206 (348)
T ss_dssp ECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCCTTSSH
T ss_pred EecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEEcccccchh
Confidence 0012 489999999999999998764 3668999999999999999
Q ss_pred ChHHHHhcCCCcCCceEEEEeecCcCCCC---------------cceee-cC--CCHHHHHHHHHHhc---CCCCccccc
Q 002429 239 GAHSFVTQHPWSTTIRVAVDLEAMGIGGR---------------SALFQ-AG--PNLWAVENFAAVAK---YPSGQIIGQ 297 (923)
Q Consensus 239 GS~~f~~~h~~~~~v~a~iNlD~~G~gG~---------------~~lfq-~g--~~~~li~~y~~~a~---~p~~~~l~~ 297 (923)
|++...... .....+++|....+.. .+-.. .. .++.+.+...++++ .|...
T Consensus 207 Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~~---- 278 (348)
T 1ylo_A 207 GGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQA---- 278 (348)
T ss_dssp HHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCEE----
T ss_pred HHHHhhccc----CCCEEEEEeccccCCCCCCCccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE----
Confidence 988755321 2246688887665321 11111 11 25666666555432 22211
Q ss_pred ccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 002429 298 DLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (923)
Q Consensus 298 e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la 364 (923)
+.. .+.+||...+.. ..|+|.+++. .+.. ..||+ .|.++.+.+....+.+..++..++
T Consensus 279 ~~~----~~ggsDa~~~~~~~~gipt~~lg-~~~~-~~Hs~---~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 279 DMF----SNGGTDGGAVHLTGTGVPTLVMG-PATR-HGHCA---ASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp EEC----SSCCCHHHHHHTSTTCCCEEEEE-CCCB-SCSSS---CEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred eec----CCCcchHHHHHHhcCCCCEEEEC-cccC-cCCCc---ceEeeHHHHHHHHHHHHHHHHHhh
Confidence 111 246899999853 2699999764 3333 38987 466778999998888888887664
No 41
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.17 E-value=8e-11 Score=133.11 Aligned_cols=151 Identities=20% Similarity=0.242 Sum_probs=109.9
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
-+.+.++.++.+++|.++ |.+ |.++.++++||.++|++++ ++++.+..... .-.+
T Consensus 19 ~~~~~~~~~~~l~~L~~i-ps~--s~~E~~~~~~l~~~l~~~G------~~v~~~~~~~~----------------~~~~ 73 (396)
T 3rza_A 19 GMINEQRLLNTFLELVQI-DSE--TGNESTIQPILKEKFIALG------LDVKEDEAAKH----------------PKLG 73 (396)
T ss_dssp CCSCHHHHHHHHHHHHTS-CCB--TTCTTTHHHHHHHHHHHTT------CEEEECSGGGS----------------TTCS
T ss_pred EeecHHHHHHHHHHHeec-CCC--CcCHHHHHHHHHHHHHHCC------CEEEEeccccc----------------cCCC
Confidence 457889999999999997 333 3344689999999999998 34443321000 0013
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCC
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGA----GDCSSCVAVMLELARVMSQWAHEFK 222 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------spGA----~Dd~sgva~mLE~ar~L~~~~~~p~ 222 (923)
..||+++++|+. ++.+.+.|++.+|+|+||. ++|+ .||+.|++++|++++.|.+.+. ++
T Consensus 74 ~~nvia~~~g~~-~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~ 151 (396)
T 3rza_A 74 ANNLVCTMNSTI-EEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PH 151 (396)
T ss_dssp SCCEEEEECCCC-C---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CC
T ss_pred CceEEEEECCcC-CCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CC
Confidence 579999998731 0134678999999999963 4666 5999999999999999988753 67
Q ss_pred CcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 223 NAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 223 ~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
++|.|+|..+||.|..|++.+..+. .+....+++|..
T Consensus 152 ~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~ 188 (396)
T 3rza_A 152 GQIQFVITVGEESGLIGAKELNSEL---LDADFGYAIDAS 188 (396)
T ss_dssp CCEEEEEESCGGGTSHHHHHCCGGG---CCCSEEEEEEES
T ss_pred CCEEEEEEcccccccHhHhhhchhh---cccceEEEEecC
Confidence 8999999999999999999886432 123456666644
No 42
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.16 E-value=2e-10 Score=133.85 Aligned_cols=135 Identities=16% Similarity=0.244 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCC----------HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHAVGS----------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGK 155 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS----------~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~ 155 (923)
.+++.+.+++|.++. -+.+. .+..++.+||.++|+++|. +++.
T Consensus 33 ~~~~~~~l~~lv~ip-s~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~------~~~~-------------------- 85 (492)
T 3khx_A 33 EDQIINDLKGLLAIE-SVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGF------TTHD-------------------- 85 (492)
T ss_dssp HHHHHHHHHHHHTSC-CCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTC------EEEE--------------------
T ss_pred HHHHHHHHHHHhcCC-CCCCCcccccccccchHHHHHHHHHHHHHHHcCC------cceE--------------------
Confidence 578899999999873 33332 2346899999999999983 3321
Q ss_pred cccccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHh
Q 002429 156 TLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQ 216 (923)
Q Consensus 156 ~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~ 216 (923)
..|+++.++.. ..++.|++.+|+|+||. ++|+.||++|++++|++++.|++
T Consensus 86 ------~~~~~~~~~~g----~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~ 155 (492)
T 3khx_A 86 ------VDHIAGRIEAG----KGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILED 155 (492)
T ss_dssp ------ETTTEEEEEEE----CSSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHH
T ss_pred ------eCCEEEEEEeC----CCCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHH
Confidence 01344444421 23578999999999985 26999999999999999999999
Q ss_pred cCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEee
Q 002429 217 WAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 217 ~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
.+.+++++|.|+|+.+||.|..|++.++++++. ....++.|
T Consensus 156 ~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~---~~~~~~~d 196 (492)
T 3khx_A 156 MNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM---PTLGFAPD 196 (492)
T ss_dssp TTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC---CSEEECSS
T ss_pred cCCCCCCCEEEEEECCccCCCcCHHHHHHhCcC---CCEEEecC
Confidence 877889999999999999999999999987753 33444444
No 43
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.15 E-value=1.6e-10 Score=134.01 Aligned_cols=145 Identities=12% Similarity=0.172 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHcCCCCCCCC--------HHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccc
Q 002429 87 LEAMKHVKALTQLGPHAVGS--------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS--------~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~ 158 (923)
+++.+.|++|.++. -+.+. .+..++.+|+.++|+++|.+ ..++++. .. .
T Consensus 18 ~~~~~~l~~lv~ip-s~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~---~~~~~~~--~~-------~---------- 74 (472)
T 3pfe_A 18 EEILPSLCDYIKIP-NKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPK---GMTLEIV--RL-------K---------- 74 (472)
T ss_dssp HTHHHHHHHHHTCC-CBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCT---TCEEEEE--CC-------T----------
T ss_pred HHHHHHHHHHhCCC-CcCCCccccccccchHHHHHHHHHHHHHHcCCC---CcceEEE--ec-------C----------
Confidence 45788899999873 22221 12468999999999999842 1223321 10 0
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 002429 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQW 217 (923)
Q Consensus 159 Y~~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~ 217 (923)
....||+++++|+ +.+.|++.+|+|+||. ++|+.||+.+++++|++++.|++.
T Consensus 75 -~~~~~v~a~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~ 148 (472)
T 3pfe_A 75 -NRTPLLFMEIPGQ-----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQ 148 (472)
T ss_dssp -TSCCEEEEEECCS-----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHT
T ss_pred -CCCcEEEEEEcCC-----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHc
Confidence 0347999999762 3478999999998873 378999999999999999999987
Q ss_pred CCCCCCcEEEEEeCCCCCCCcChHHHHhcCCC-cCCceEEEEeec
Q 002429 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEA 261 (923)
Q Consensus 218 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~-~~~v~a~iNlD~ 261 (923)
+..++ +|+|+|..+||.|..|++.++++++. .+++.+++.+|.
T Consensus 149 ~~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~ 192 (472)
T 3pfe_A 149 GLPYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDS 192 (472)
T ss_dssp TCCCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECC
T ss_pred CCCCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCC
Confidence 76666 99999999999999999999976532 236788888884
No 44
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.15 E-value=7.5e-10 Score=124.01 Aligned_cols=224 Identities=20% Similarity=0.196 Sum_probs=156.3
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
+.++.|++|+++ |.+.|.+ +++++|+.+++++++. +++.| +..||++
T Consensus 4 ~~~~~l~~L~~i-ps~SG~E--~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNli~ 50 (355)
T 3kl9_A 4 TLFSKIKEVTEL-AAVSGHE--APVRAYLREKLTPHVD------EVVTD------------------------GLGGIFG 50 (355)
T ss_dssp HHHHHHHHHHTS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEEE
T ss_pred HHHHHHHHHHhC-CCCCCCH--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCeEEE
Confidence 578899999996 6667654 5789999999999983 34332 3468999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccCC--------C---------------------------------------------
Q 002429 168 RILPKYASEAGENAILVSSHIDTVSA--------G--------------------------------------------- 194 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~~--------s--------------------------------------------- 194 (923)
+++|+ +++.+.|++.||+|+|+. +
T Consensus 51 ~~~g~---~~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~ 127 (355)
T 3kl9_A 51 IKHSE---AVDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGK 127 (355)
T ss_dssp EECCC---STTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC----------
T ss_pred EECCc---CCCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChh
Confidence 99874 124578999999999862 0
Q ss_pred --------------------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 002429 195 --------------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (923)
Q Consensus 195 --------------------------------------------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~ 224 (923)
-.+-||.+||++++|+++.+++. .++++
T Consensus 128 ~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~ 205 (355)
T 3kl9_A 128 GGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNE 205 (355)
T ss_dssp -----CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSE
T ss_pred hccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCce
Confidence 24789999999999999998753 57899
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCCC-----------Cccee-ecC--CCHHHHHHHHHHhcCC
Q 002429 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-----------RSALF-QAG--PNLWAVENFAAVAKYP 290 (923)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG-----------~~~lf-q~g--~~~~li~~y~~~a~~p 290 (923)
++++|+..||.|+.||+....... -..+|++|+..++. ..+-. ..+ .++.+.+...+.++.
T Consensus 206 v~~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~- 280 (355)
T 3kl9_A 206 LYLGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEE- 280 (355)
T ss_dssp EEEEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHHH-
T ss_pred EEEEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHHH-
Confidence 999999999999999987764321 23478888754332 22222 112 267777777665421
Q ss_pred CCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 002429 291 SGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (923)
Q Consensus 291 ~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la 364 (923)
.+-.. +..+. ..+||-..+.. ..|+|.+++.. ...+ .||+. |.++.+.+.+..+.+.+++..+.
T Consensus 281 ~gIp~-q~~~~----ggGtDa~~i~~a~~Gipt~~igv-p~~~-~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 281 AGIKY-QYYCG----KGGTDAGAAHLKNGGVPSTTIGV-CARY-IHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp TTCCE-EEEEC----SSCCTHHHHTTSTTCCCEEEEEE-EEBS-CSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCE-EEECC----CcchHHHHHHHhCCCCCEEEEcc-CcCC-CCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 11111 11221 25899888763 26899998753 3332 78865 67788889998888888887664
No 45
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.14 E-value=2.4e-10 Score=127.43 Aligned_cols=139 Identities=19% Similarity=0.204 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
++..+.+++|.++ |-+. ..+.++++||.++|++++. +++... +.+..|++
T Consensus 3 ~~~~~~~~~L~~~-ps~s--~~e~~~~~~l~~~l~~~g~------~~~~~~---------------------~~~~~n~~ 52 (377)
T 3isz_A 3 EKVVSLAQDLIRR-PSIS--PNDEGCQQIIAERLEKLGF------QIEWMP---------------------FNDTLNLW 52 (377)
T ss_dssp HHHHHHHHHHHTS-CCBT--TCCTTHHHHHHHHHHHTTC------EEEECC---------------------BTTBCEEE
T ss_pred hHHHHHHHHHhcC-CCCC--CChhhHHHHHHHHHHHCCC------ceEEee---------------------cCCCceEE
Confidence 5778999999986 3333 3345789999999999983 333210 01457899
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~---------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
+++ |+ +.+.|++.+|+|+||. ++|+.|++.|++++|++++.|.+.+.+++++|
T Consensus 53 a~~-g~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v 126 (377)
T 3isz_A 53 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 126 (377)
T ss_dssp EEE-ES-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceE
Confidence 988 53 3578999999999985 26788999999999999999988777788999
Q ss_pred EEEEeCCCCCCC-cChHHHHhcCCC-cCCceEEEEeec
Q 002429 226 IFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLEA 261 (923)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~h~~-~~~v~a~iNlD~ 261 (923)
+|+|..+||.+. .||+.+++.... ..++.+++..|.
T Consensus 127 ~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~ 164 (377)
T 3isz_A 127 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEP 164 (377)
T ss_dssp EEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCC
T ss_pred EEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCC
Confidence 999999999876 699998753211 123555665553
No 46
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.12 E-value=1.7e-10 Score=134.51 Aligned_cols=140 Identities=16% Similarity=0.237 Sum_probs=107.9
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~ 161 (923)
.+++.++.++.+++|.++ |++.+. +.++.+||.++++++| ++++.+ .
T Consensus 9 ~~~~~~~~~~~~~~L~~i-ps~s~~--e~~~~~~l~~~l~~~G------~~v~~~------------------------~ 55 (490)
T 3mru_A 9 STLSPAPLWQFFDKICSI-PHPSKH--EEALAQYIVTWATEQG------FDVRRD------------------------P 55 (490)
T ss_dssp GGSSSHHHHHHHHHHHHS-CCBTTC--CTTHHHHHHHHHHHTT------CEEEEC------------------------T
T ss_pred hccCHHHHHHHHHHHhCC-CCCCCC--HHHHHHHHHHHHHHcC------CEEEEc------------------------C
Confidence 357788999999999997 565553 4689999999999998 333321 2
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEEeeccccCCC------------------------CCCC---CChhHHHHHHHHHHHH
Q 002429 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVM 214 (923)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s------------------------pGA~---Dd~sgva~mLE~ar~L 214 (923)
..||+++++|+. +.++.+.|++.+|+|+||.. +|+. ||+.|+|++|++++
T Consensus 56 ~~nv~a~~~g~~-g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~-- 132 (490)
T 3mru_A 56 TGNVFIKKPATP-GMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA-- 132 (490)
T ss_dssp TCCEEEEECCCT-TCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH--
T ss_pred CCeEEEEEcCCC-CCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH--
Confidence 358999998741 11356789999999999753 5775 99999999999763
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 215 ~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
....++.+|.|+|+.+||.|+.|++.++++. -+.+.++|+|..
T Consensus 133 --~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 --SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp --CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred --hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 3345678999999999999999999988432 246788888853
No 47
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.08 E-value=1.2e-09 Score=124.39 Aligned_cols=135 Identities=14% Similarity=0.214 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEE
Q 002429 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (923)
Q Consensus 87 erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi 166 (923)
+++.+.+++|.++ |.+.+ ++.++.+||.++|+++|. +++.+. ...||+
T Consensus 28 ~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~v~~~~-----------------------~~~~l~ 75 (418)
T 1xmb_A 28 DWMVKIRRKIHEN-PELGY--EELETSKLIRSELELIGI------KYRYPV-----------------------AITGVI 75 (418)
T ss_dssp HHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHHTC------CEEEEE-----------------------TTTEEE
T ss_pred HHHHHHHHHHHhC-CCCCC--ChHHHHHHHHHHHHHcCC------eeEecc-----------------------CCcEEE
Confidence 6788899999986 44443 446889999999999983 343321 246899
Q ss_pred EEEcCCCCCCCCCCeEEEEeeccccCCCC-----------CC---CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 002429 167 LRILPKYASEAGENAILVSSHIDTVSAGE-----------GA---GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (923)
Q Consensus 167 ~~i~g~~~~~~~~~~vll~aH~DSv~~sp-----------GA---~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~ 232 (923)
++++|+ .+ +.|++.+|+|+||... |. .+.+.|++++|++++.|++.+.+++++|+|+|+.+
T Consensus 76 a~~~~~----~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~ 150 (418)
T 1xmb_A 76 GYIGTG----EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPA 150 (418)
T ss_dssp EEEESS----SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECC
T ss_pred EEEcCC----CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecc
Confidence 999764 23 7899999999998531 21 11238999999999999987777899999999999
Q ss_pred CCCCCcChHHHHhcCCCcCCceEEEEee
Q 002429 233 EEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 233 EE~gl~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
|| |..|++.++++.. .+++.++++++
T Consensus 151 EE-g~~G~~~~~~~g~-~~~~d~~i~~~ 176 (418)
T 1xmb_A 151 EE-GLSGAKKMREEGA-LKNVEAIFGIH 176 (418)
T ss_dssp TT-TTCHHHHHHHTTT-TTTEEEEEEEE
T ss_pred cc-ccccHHHHHHcCC-cCCCCEEEEEe
Confidence 99 9999999996542 23466777754
No 48
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.05 E-value=2e-10 Score=126.79 Aligned_cols=224 Identities=14% Similarity=0.089 Sum_probs=145.0
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
+.++.|++|+++ |.+.|. ++.+++||.+++++++.+ +++|.... .+ .+..|+++
T Consensus 18 ~~~~~l~~Lv~i-~s~sg~--e~~v~~~l~~~l~~~g~~------v~~d~~~~-------~~----------~~~gnlia 71 (321)
T 3cpx_A 18 QGMQLLKELCSI-HAPSGN--EEPLKDFILEYIRSNAGS------WSYQPVIY-------AD----------NDLQDCIV 71 (321)
T ss_dssp CHHHHHHHHHHS-CCBTTC--CHHHHHHHHHHHHHHGGG------SSSCCEEE-------CS----------GGGTTCEE
T ss_pred HHHHHHHHHHcC-CCCCCC--HHHHHHHHHHHHHhhCCe------EEEccccc-------cc----------cCCccEEE
Confidence 457889999997 455553 346799999999999853 11111000 00 02468999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccC-----------C---------------------------------------CCC-
Q 002429 168 RILPKYASEAGENAILVSSHIDTVS-----------A---------------------------------------GEG- 196 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~-----------~---------------------------------------spG- 196 (923)
+++| . +.++++||+|+|+ . .+|
T Consensus 72 ~~~g------~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd 144 (321)
T 3cpx_A 72 LVFG------N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGT 144 (321)
T ss_dssp EEES------S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTC
T ss_pred EecC------C-ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCC
Confidence 8754 2 5699999999983 0 122
Q ss_pred ------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEE
Q 002429 197 ------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVD 258 (923)
Q Consensus 197 ------------------A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iN 258 (923)
+.||+.||+++||+++.+. + ++++|++.||.|+.|++....-.....+..++++
T Consensus 145 ~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~~~~~~i~ 216 (321)
T 3cpx_A 145 EVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETFHVKQSLI 216 (321)
T ss_dssp EEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHHCCCEEEE
T ss_pred EEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccccCCCEEEE
Confidence 6899999999999999754 2 9999999999999999863210000123467889
Q ss_pred eecCcCCC-------CcceeecC--CCHHHHHHHHHHhcCCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeec
Q 002429 259 LEAMGIGG-------RSALFQAG--PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYT 328 (923)
Q Consensus 259 lD~~G~gG-------~~~lfq~g--~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~ 328 (923)
+|....+. ..+-...+ +++.+.+..++.++. .+.....+.+ .+++||-..+.. ..|+|.+++...
T Consensus 217 ~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~q~~~~----~~GGsD~~~~~~s~~Gipt~~lG~~ 291 (321)
T 3cpx_A 217 CDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TDIPFQLEVE----GAGASDGRELQLSPYPWDWCFIGAP 291 (321)
T ss_dssp CCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SSCCEEEEEC----SSCCCHHHHHHHSSSCCBCCBEECE
T ss_pred EeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cCCCEEEEeC----CCCCccHHHHHHhCCCCCEEEEchh
Confidence 99776432 22211112 266777777766532 2221111111 456899888842 379999977544
Q ss_pred CCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 002429 329 DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (923)
Q Consensus 329 ~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~ 362 (923)
. ...||+. |.++.+.++...+.+..++..
T Consensus 292 ~--~~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 292 E--KDAHTPN---ECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp E--BSTTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred h--cccchhh---hheeHHHHHHHHHHHHHHHHh
Confidence 3 3379854 567788888888888777764
No 49
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.05 E-value=5.8e-10 Score=124.84 Aligned_cols=130 Identities=19% Similarity=0.217 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCH---HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 002429 86 ELEAMKHVKALTQLGPHAVGSD---ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~---~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (923)
.+++++.+++|.++. ...... ++.++++||.++|+ + ++++.+... .+.
T Consensus 8 ~~~~~~~l~~l~~ip-s~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~~~--------------------~~~ 58 (369)
T 2f7v_A 8 LASTLEHLETLVSFD-TRNPPRAIAAEGGIFDYLRAQLP--G------FQVEVIDHG--------------------DGA 58 (369)
T ss_dssp HHHHHHHHHHHHHSC-CBTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEECS--------------------TTC
T ss_pred hHHHHHHHHHHhCCC-CcCCCCCCccHHHHHHHHHHHhC--C------CceEEEEcC--------------------CCc
Confidence 468899999999973 333112 44689999999888 5 344443210 034
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeeccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 002429 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (923)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~-------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~ 223 (923)
.|+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. +++
T Consensus 59 ~~~~a-~~g~-------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~ 123 (369)
T 2f7v_A 59 VSLYA-VRGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDG 123 (369)
T ss_dssp EEEEE-EESC-------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCC
T ss_pred eEEEE-EcCC-------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCC
Confidence 78999 8752 56999999999974 37899999999999999986 678
Q ss_pred cEEEEEeCCCCC-CCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 224 AVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 224 ~I~flf~~~EE~-gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
+|+|+|+.+||. |+.|++.++++.. +..+++++|..
T Consensus 124 ~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 124 DAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999 8899999996543 56677888754
No 50
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.02 E-value=8.3e-10 Score=128.30 Aligned_cols=139 Identities=14% Similarity=0.227 Sum_probs=104.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCcccccccccccccccccc
Q 002429 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (923)
Q Consensus 83 ~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~ 162 (923)
+.+.+++++.+++|.++ |.+.+ ++.++++||.+++++++ ++++.+ ..
T Consensus 7 ~~~~~~~~~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G------~~~~~~------------------------~~ 53 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAI-PHPSY--KEEQLAQFIINWAKTKG------FFAERD------------------------EV 53 (487)
T ss_dssp CSSSHHHHHHHHHHHHS-CCBTT--CCHHHHHHHHHHHHHTT------CEEEEC------------------------TT
T ss_pred ccCHHHHHHHHHHHHcC-CCCCC--cHHHHHHHHHHHHHHcC------CEEEEc------------------------CC
Confidence 45678999999999997 44443 34689999999999998 233321 23
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEEeeccccCCC------------------------CCCC---CChhHHHHHHHHHHHHH
Q 002429 163 NHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVMS 215 (923)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s------------------------pGA~---Dd~sgva~mLE~ar~L~ 215 (923)
.|++++++|+. +.++.+.|++.+|+|+||.. +|+. ||+.|+|++|++++.
T Consensus 54 ~nv~a~~~g~~-g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~-- 130 (487)
T 2qyv_A 54 GNVLIRKPATV-GMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES-- 130 (487)
T ss_dssp CCEEEEECCCT-TCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC--
T ss_pred CcEEEEeCCCC-CCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh--
Confidence 58999997631 00245789999999999863 3776 999999999999973
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecC
Q 002429 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~ 262 (923)
.+ .++++|+|+|+.+||.|+.|++.++++. . +...++++|..
T Consensus 131 -~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~ 172 (487)
T 2qyv_A 131 -ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTE 172 (487)
T ss_dssp -SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCC
T ss_pred -CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccC
Confidence 23 4678999999999999999999988532 2 35667777754
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.01 E-value=2.6e-09 Score=121.24 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.+++|.++ |.+.+ ++.++.+||.++|+++|. +++.+. .+..||
T Consensus 31 ~~~~i~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~v~~~~----------------------~~~~nv 79 (404)
T 1ysj_A 31 HTRLINMRRDLHEH-PELSF--QEVETTKKIRRWLEEEQI------EILDVP----------------------QLKTGV 79 (404)
T ss_dssp HHHHHHHHHHHHHS-CCCTT--CCHHHHHHHHHHHHHTTC------EECCCT----------------------TCSSCE
T ss_pred HHHHHHHHHHHHhc-CCCCC--ChHHHHHHHHHHHHHcCC------ceEEec----------------------cCCceE
Confidence 46788899999986 44443 446889999999999982 222110 024689
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSAGE-----------G---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~sp-----------G---A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~ 231 (923)
+++++|+ .+.+.|++.+|+|+||... | +.+.+.|++++|++++.|++.+.+++++|+|+|+.
T Consensus 80 ~a~~~g~----~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 155 (404)
T 1ysj_A 80 IAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQP 155 (404)
T ss_dssp EEEEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEES
T ss_pred EEEEeCC----CCCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEec
Confidence 9999874 2357899999999998541 2 12345899999999999998766789999999999
Q ss_pred CCCCCCcChHHHHhcCCCcCCceEEEEe
Q 002429 232 GEEEGLNGAHSFVTQHPWSTTIRVAVDL 259 (923)
Q Consensus 232 ~EE~gl~GS~~f~~~h~~~~~v~a~iNl 259 (923)
+||. ..|++.++++. ..+++.+++.+
T Consensus 156 ~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 156 AEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp CTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred cccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 9999 78999999643 33445666665
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.91 E-value=1.8e-08 Score=112.72 Aligned_cols=220 Identities=17% Similarity=0.200 Sum_probs=150.3
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEE
Q 002429 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (923)
Q Consensus 88 rA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~ 167 (923)
+.++.|++|+++ |.++|.++ .++++|+.+++++++. ++++| +..||++
T Consensus 10 ~~~~~l~~L~~i-pspSG~E~-~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNvi~ 57 (354)
T 2vpu_A 10 VDWKLMQEIIEA-PGVSGYEH-LGIRDIVVDVLKEVAD------EVKVD------------------------KLGNVIA 57 (354)
T ss_dssp CCHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHHTTCS------EEEEC------------------------TTCCEEE
T ss_pred HHHHHHHHHHhC-CCCCcccH-HHHHHHHHHHHHHhCC------EEEEc------------------------CCCeEEE
Confidence 357889999996 67777543 2789999999999973 34432 3468999
Q ss_pred EEcCCCCCCCCCCeEEEEeeccccCC------------------------------------------------------
Q 002429 168 RILPKYASEAGENAILVSSHIDTVSA------------------------------------------------------ 193 (923)
Q Consensus 168 ~i~g~~~~~~~~~~vll~aH~DSv~~------------------------------------------------------ 193 (923)
+++|+ . +.|++.||+|+|+.
T Consensus 58 ~~~g~----~--~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~ 131 (354)
T 2vpu_A 58 HFKGS----S--PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQE 131 (354)
T ss_dssp EECCS----S--SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC----
T ss_pred EEcCC----C--CEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCccc
Confidence 88763 1 67999999999862
Q ss_pred ------------------------------------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 002429 194 ------------------------------------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (923)
Q Consensus 194 ------------------------------------------------spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I 225 (923)
.-.+-||..||++++|+++.+++ ++.++
T Consensus 132 ~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v 207 (354)
T 2vpu_A 132 DKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADI 207 (354)
T ss_dssp -----CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEE
T ss_pred ccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeE
Confidence 03588999999999999998753 67999
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcCCCCc--------c----eee-cCC-CHHHHHHHHHHhc---
Q 002429 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS--------A----LFQ-AGP-NLWAVENFAAVAK--- 288 (923)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG~~--------~----lfq-~g~-~~~li~~y~~~a~--- 288 (923)
+++|++-||.|+.||+.....- .. ..+|.+|+.-++.+. + +.. +.+ ++.+.+...+.++
T Consensus 208 ~~~ft~qEEVG~~ga~~aa~~i--~p--d~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~g 283 (354)
T 2vpu_A 208 YIVGSVQEEVGLRGARVASYAI--NP--EVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYE 283 (354)
T ss_dssp EEEECSCCTTTSHHHHHHHHHH--CC--SEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEECCcccCccchhhhhccc--CC--CEEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999988655321 11 256777754222111 0 222 222 6777777666542
Q ss_pred CCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 002429 289 YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (923)
Q Consensus 289 ~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~ 365 (923)
.|+-. +... -+++||-..+.. ..|+|..++..- ..+ .|++. |.++.+.+.+..+.+.+++..+..
T Consensus 284 Ip~q~----~~~~---g~gGtDa~~i~~a~~Gipt~~Igvp-~~~-~Hs~~---E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 284 IPLQV----EPSP---RPTGTDANVMQINKEGVATAVLSIP-IRY-MHSQV---ELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp CCCEE----EECC---SCCSSTHHHHHTSTTCCEEEEEEEE-EBS-TTSTT---CEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCcEE----EeCC---CCCccHHHHHHHhcCCCCEEEECcc-ccc-CcCcc---eEeeHHHHHHHHHHHHHHHHhccH
Confidence 22211 1111 124899888753 368999997533 222 78864 567788899998999998887753
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.90 E-value=5.1e-09 Score=118.61 Aligned_cols=141 Identities=13% Similarity=0.086 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceE
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NV 165 (923)
.+++.+.+++|.++ |- -|.++.++.+||.++|+++| ++++.+. . .+..||
T Consensus 15 ~~~~~~~~~~l~~~-pe--~s~~E~~~~~~i~~~l~~~G------~~v~~~~----------~-----------g~~~~v 64 (394)
T 3ram_A 15 KYSYIEISHRIHER-PE--LGNEEIFASRTLIDRLKEHD------FEIETEI----------A-----------GHATGF 64 (394)
T ss_dssp HHHHHHHHHHHHHS-CC--CTTCCHHHHHHHHHHHHHTT------CEEEEEE----------T-----------TEEEEE
T ss_pred HHHHHHHHHHHHhC-CC--CCcchHHHHHHHHHHHHHcC------CeEEeCC----------C-----------CCceEE
Confidence 35778888888885 33 34455689999999999998 3444331 0 035799
Q ss_pred EEEEcCCCCCCCCCCeEEEEeeccccCCC-CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC-CcChH-H
Q 002429 166 VLRILPKYASEAGENAILVSSHIDTVSAG-EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAH-S 242 (923)
Q Consensus 166 i~~i~g~~~~~~~~~~vll~aH~DSv~~s-pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~g-l~GS~-~ 242 (923)
+++++|. .+.+.|++.+|+|+||.- .|-+.|. -.+++|.+++.|++.+..++++|.|+|+.+||.| ..||+ .
T Consensus 65 ia~~~g~----~~g~~i~l~ah~D~vpg~~ha~G~d~-~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~ 139 (394)
T 3ram_A 65 IATYDSG----LDGPAIGFLAEYDALPGLGHACGHNI-IGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKAS 139 (394)
T ss_dssp EEEEECS----SSSCEEEEEECCCCCTTTSSTTCHHH-HHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHH
T ss_pred EEEEeCC----CCCCEEEEEEecccCCCcceECCccH-HHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHH
Confidence 9999874 345799999999999832 1122233 3467889999998765568899999999999998 58999 8
Q ss_pred HHhcCCCcCCceEEEEeecC
Q 002429 243 FVTQHPWSTTIRVAVDLEAM 262 (923)
Q Consensus 243 f~~~h~~~~~v~a~iNlD~~ 262 (923)
++++ ...+++.+++.+|..
T Consensus 140 ~~~~-g~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 140 YVKA-GVIDQIDIALMIHPG 158 (394)
T ss_dssp HHHH-TGGGGCSEEECCEEE
T ss_pred HHHc-CCcccCCEEEEECCc
Confidence 7754 233457788877643
No 54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.67 E-value=2e-07 Score=107.20 Aligned_cols=159 Identities=14% Similarity=0.146 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccC----CCc----------c-cccc
Q 002429 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKS----GAN----------R-VGTG 150 (923)
Q Consensus 86 ~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~----g~~----------~-~~~~ 150 (923)
.++..+..++|-++ |-. +.++.++.+||.++|+++| ++++........ |.. + ...|
T Consensus 13 ~~~~~~~~~~lh~~-Pe~--~~~E~~t~~~i~~~L~~~G------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 13 APSMTQWRRDFHLH-AES--GWLEFRTASKVADILDGLG------YQLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHHHHT-CCC--TTCCHHHHHHHHHHHHHTT------CEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC-CCC--CCcHHHHHHHHHHHHHHCC------CeEEecccccccccccccccchhhhhhhhhhcccc
Confidence 35677777888774 333 3455689999999999998 333321100000 000 0 0000
Q ss_pred cccccccccc--ccceEEEEEcCCCCCCCCCCeEEEEeeccccCCC------------------CCCC---CChhHHHHH
Q 002429 151 VFKGKTLIYS--DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------EGAG---DCSSCVAVM 207 (923)
Q Consensus 151 ~~~~~~~~Y~--~~~NVi~~i~g~~~~~~~~~~vll~aH~DSv~~s------------------pGA~---Dd~sgva~m 207 (923)
..+...... +..||+++++|+ .+.+.|++.+|+|+||.. +|.. +...++|++
T Consensus 84 -~~~~~~~~~~~~~~~vva~~~~~----~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~ 158 (445)
T 3io1_A 84 -APERWLPAFEGGFAGVVATLDTG----RPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIG 158 (445)
T ss_dssp -CCTTTGGGGTTTCCCEEEEEECS----SCCCEEEEEEECCCCCC-------------------------CTTCTHHHHH
T ss_pred -ccccccccccCCCCEEEEEEeCC----CCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHH
Confidence 000000001 458999999874 345789999999999942 1211 112469999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEee
Q 002429 208 LELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (923)
Q Consensus 208 LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD 260 (923)
|.+++.|++.+.+++.+|+|+|..+|| +..|++.++++. ..+++.+++.+|
T Consensus 159 l~aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h 209 (445)
T 3io1_A 159 LGLAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIH 209 (445)
T ss_dssp HHHHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEE
T ss_pred HHHHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEe
Confidence 999999998777889999999999999 668999999542 334677777776
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.61 E-value=6.3e-07 Score=99.81 Aligned_cols=210 Identities=16% Similarity=0.269 Sum_probs=138.4
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEE
Q 002429 90 MKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRI 169 (923)
Q Consensus 90 ~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i 169 (923)
.+.|++|+++ |.++|.+ +++++|+.+++++++. +++.| +..||++++
T Consensus 14 ~~~l~~L~~~-pspSG~E--~~v~~~i~~~l~~~~~------e~~~D------------------------~~Gnvi~~~ 60 (343)
T 3isx_A 14 KELIRKLTEA-FGPSGRE--EEVRSIILEELEGHID------GHRID------------------------GLGNLIVWK 60 (343)
T ss_dssp HHHHHHHHHS-CCBTTCC--HHHHHHHHHHHTTTCS------EEEEC------------------------TTCCEEEEE
T ss_pred HHHHHHHHhC-CCCCCch--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCCEEEEE
Confidence 4668889886 6777754 5779999999999973 34432 456899987
Q ss_pred cCCCCCCCCCCeEEEEeeccccCC--------C-----------------------------------------------
Q 002429 170 LPKYASEAGENAILVSSHIDTVSA--------G----------------------------------------------- 194 (923)
Q Consensus 170 ~g~~~~~~~~~~vll~aH~DSv~~--------s----------------------------------------------- 194 (923)
|+ +.+.|++.||+|+++. +
T Consensus 61 -g~-----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~ 134 (343)
T 3isx_A 61 -GS-----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKL 134 (343)
T ss_dssp -CC-----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTC
T ss_pred -CC-----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCC
Confidence 32 3467999999999852 0
Q ss_pred -----------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 002429 195 -----------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (923)
Q Consensus 195 -----------------------------------------pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~E 233 (923)
-.+-||..||++++|+++.+.. +++++++|+.-|
T Consensus 135 ~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qE 209 (343)
T 3isx_A 135 SFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQE 209 (343)
T ss_dssp CGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCC
T ss_pred CcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCc
Confidence 2488999999999999998642 689999999999
Q ss_pred CCCCcChHHHHhcCCCcCCceEEEEeecCcCCC---------------Ccceeec-CC--CHHHHHHHHHHhc---CCCC
Q 002429 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG---------------RSALFQA-GP--NLWAVENFAAVAK---YPSG 292 (923)
Q Consensus 234 E~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~gG---------------~~~lfq~-g~--~~~li~~y~~~a~---~p~~ 292 (923)
|.|+.|++.....- .. ..+|.+|+.-++. +.+-... +. ++.+.+...+.++ .|+-
T Consensus 210 EVG~~Ga~~aa~~i--~p--d~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q 285 (343)
T 3isx_A 210 EVGLVGASVAGYGV--PA--DEAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQ 285 (343)
T ss_dssp CTTSCCSTTTGGGC--CC--SEEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCCE
T ss_pred ccCchhHHHHhhcC--CC--CEEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeE
Confidence 99999998655322 12 2467777543221 1111111 11 3556665555432 2221
Q ss_pred cccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 002429 293 QIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (923)
Q Consensus 293 ~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv 360 (923)
. +... ..+||-..+.. ..|+|..++..- .. ..||+. |.++.+.++++.+.+.+++
T Consensus 286 ~----~v~~----ggGTDa~~i~~a~~Gipt~~Igvp-~r-~~Hs~~---E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 286 M----EVLT----FGGTNAMGYQRTREGIPSATVSIP-TR-YVHSPS---EMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp E----CCCB----CCCSSHHHHHHHTSSCCEEEEEEE-EB-STTSTT---EEECHHHHHHHHHHHHHHH
T ss_pred E----ecCC----CCchHHHHHHHhcCCCCEEEEccc-cc-cccchh---hEecHHHHHHHHHHHHHHH
Confidence 1 1121 25899877642 379999988533 22 278864 5667777878777666654
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.28 E-value=1.1e-05 Score=86.17 Aligned_cols=152 Identities=18% Similarity=0.148 Sum_probs=82.2
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCCcCCceEEEEeecCcC----------CC
Q 002429 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI----------GG 266 (923)
Q Consensus 197 A~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNlD~~G~----------gG 266 (923)
+.|+..++..++++++.|.. ......+.+...++.|..+...-...... ............. .+
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (354)
T 2wzn_A 183 YLDDRICLYAMIEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYAINP--EVGIAMDVTFAKQPHDKGKIVPELG 256 (354)
T ss_dssp THHHHHHHHHHHHHHHHCCC----CSSEEEEEEESCGGGTSHHHHHHHHHHCC--SEEEEEEEEECCCTTSTTCCCCCTT
T ss_pred cccccchhhhHHHHHHHHHh----ccccccccccceeeeeeeccccccccccc--ccceeeeeeeccccchhhhhheeec
Confidence 34566677777777776543 45667788888888887655443322111 1122222111110 01
Q ss_pred CcceeecCC--CHHHHHHHH---HHhcCCCCcccccccccCCCCCCCCchHHhhh-cCCCeEEEEeecCCCCCCCCcCCC
Q 002429 267 RSALFQAGP--NLWAVENFA---AVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDR 340 (923)
Q Consensus 267 ~~~lfq~g~--~~~li~~y~---~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt 340 (923)
.......+. ++....... .....+.. .+.. ..+.+||-..|.. ..|+|.+.+... ..+ .||+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~ggTDa~~~~~~~~Giptv~~G~g-~~~-~Ht~~-- 325 (354)
T 2wzn_A 257 KGPVMDVGPNINPKLRAFADEVAKKYEIPLQ----VEPS---PRPTGTDANVMQINKEGVATAVLSIP-IRY-MHSQV-- 325 (354)
T ss_dssp SCCEEEESTTSCHHHHHHHHHHHHHTTCCCE----EEEC---CSCCSSHHHHHHTSTTCCEEEEEEEE-EBS-TTSTT--
T ss_pred cccccccccccCcchhhhhHHHHHHhcCCCc----eEEE---ecccccHHHHHHHhcCCCCEEEECcc-cCC-CCccc--
Confidence 111111111 232222211 11112211 1222 2346899887742 279999998654 333 69965
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 341 LDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 341 ~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
|+++.+.+++..+.+..++++|...
T Consensus 326 -E~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 326 -ELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp -CEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred -EEEEHHHHHHHHHHHHHHHHhCccc
Confidence 7888999999999999999998654
No 57
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=92.40 E-value=0.14 Score=58.02 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhccc
Q 002429 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE 125 (923)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~ 125 (923)
...++.++++++++.|++ .+|..||++++++++|+.++|+++|.
T Consensus 10 ~~~i~~~~~~~~l~~Ls~-~~R~~Gs~g~~~a~~yi~~~~~~~Gl 53 (421)
T 2ek8_A 10 TKRTDAENMYNTIQFLSQ-APRVAGSPEELKAVRYIEQQFKSYGY 53 (421)
T ss_dssp HTTCCHHHHHHHHHHHTT-SCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 357999999999999998 49999999999999999999999984
No 58
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=91.88 E-value=0.17 Score=57.94 Aligned_cols=42 Identities=26% Similarity=0.329 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHH-cCCCCCCCCHHHHHHHHHHHHHHHhccc
Q 002429 84 FSELEAMKHVKALT-QLGPHAVGSDALDRALQYVLAASQKIKE 125 (923)
Q Consensus 84 fs~erA~~~L~~L~-~igpr~~GS~~n~~a~~yL~~~l~~i~~ 125 (923)
++.++++++|+.|+ .+|+|..||++++++++|+.++|+++|.
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 34568999999999 5999999999999999999999999984
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=90.72 E-value=0.61 Score=53.50 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=36.6
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHH
Q 002429 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHS 242 (923)
Q Consensus 196 GA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~ 242 (923)
++-||-.||.++||+++.+ .++.++++++++-||.|..|++.
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~g 287 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTG 287 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSS
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhh
Confidence 6889999999999998875 35789999999999999887764
No 60
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=90.61 E-value=0.24 Score=56.56 Aligned_cols=141 Identities=12% Similarity=0.003 Sum_probs=83.1
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcC-CC-cCCc-------------eEEEE
Q 002429 194 GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-STTI-------------RVAVD 258 (923)
Q Consensus 194 spGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h-~~-~~~v-------------~a~iN 258 (923)
.-.+-||..||+++||+++.+. +.+.+++++| +-||.|..|++.-.... +. .+++ ..+|.
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is 304 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVS 304 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEE
T ss_pred EeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEE
Confidence 3578899999999999999764 3567888888 99999999998754321 11 0111 57788
Q ss_pred eecCcCC------------------CCccee---ecC-CCHHHHHHHHHH---hcCCCCcccccccccCCCCCCCCchHH
Q 002429 259 LEAMGIG------------------GRSALF---QAG-PNLWAVENFAAV---AKYPSGQIIGQDLFASGVFETATDFQV 313 (923)
Q Consensus 259 lD~~G~g------------------G~~~lf---q~g-~~~~li~~y~~~---a~~p~~~~l~~e~f~~g~ips~TD~~~ 313 (923)
.|++-+. |..+-. |.. +++.+...+++. ..-|+-. +..+ ...+++||-.+
T Consensus 305 ~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~----~~~~-~d~~gGsd~g~ 379 (428)
T 2ijz_A 305 ADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQS----FVTR-SDMGCGSTIGP 379 (428)
T ss_dssp ECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCB----CCCC-SSCCCCCCCST
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEE----EEEe-CCCCccchHHH
Confidence 8865442 222111 111 244444333332 2333321 1121 12456788777
Q ss_pred hhh-cCCCeEEEEeecCCCCCCCCcCCCcCCCCH
Q 002429 314 YTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKP 346 (923)
Q Consensus 314 F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~ 346 (923)
+.. ..|+|.+|+..- --.-|++.-+...-|.
T Consensus 380 i~~~~~Gi~tvdiGip--~~~mHS~~E~~~~~D~ 411 (428)
T 2ijz_A 380 ITASQVGVRTVDIGLP--TFAMHSIRELAGSHDL 411 (428)
T ss_dssp TTGGGGSCCEEEECCC--CCSCSSSSCCCCSSHH
T ss_pred HHHhCCCCCEEEEchh--hcccchHHHHhhHHHH
Confidence 743 479999998532 2235887766655443
No 61
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=82.23 E-value=1.6 Score=52.74 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhccc
Q 002429 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE 125 (923)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpr~~GS~~n~~a~~yL~~~l~~i~~ 125 (923)
..++.++++++|+.++++ ||..||+++.++++|+.+++++.|.
T Consensus 20 ~~~~~~~i~~~l~~lt~~-ph~aGt~~~~~~a~yi~~~~~~~Gl 62 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTKL-PHLAGTEQNFLLAKKIQTQWKKFGL 62 (707)
T ss_dssp HHCCHHHHHHHHHHHSSS-CCCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHhcC-CCcCCCHhHHHHHHHHHHHHHHcCC
Confidence 468999999999999995 9999999999999999999999984
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=75.84 E-value=0.83 Score=52.60 Aligned_cols=45 Identities=24% Similarity=0.227 Sum_probs=38.1
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHH
Q 002429 195 EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSF 243 (923)
Q Consensus 195 pGA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f 243 (923)
-++-||..||.++||+++.+. .+++++++++++-||.|..|++.-
T Consensus 257 s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ga 301 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATGM 301 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTTS
T ss_pred EecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCcccccc
Confidence 367899999999999988653 467899999999999999887753
No 63
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=75.39 E-value=0.94 Score=54.23 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHHc--CCCCCCCCHHHHHHHHHHHHHHHhcccc
Q 002429 84 FSELEAMKHVKALTQ--LGPHAVGSDALDRALQYVLAASQKIKES 126 (923)
Q Consensus 84 fs~erA~~~L~~L~~--igpr~~GS~~n~~a~~yL~~~l~~i~~~ 126 (923)
++++++++||+.|++ +++|..||++++++++||.++++++|.+
T Consensus 15 i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 15 LDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 456689999999998 5899999999999999999999999853
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=72.71 E-value=0.59 Score=53.80 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHH
Q 002429 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSF 243 (923)
Q Consensus 196 GA~Dd~sgva~mLE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f 243 (923)
++-||..||+++||+++.+.+ .++++++++|++-||.|..|++.-
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 577999999999999886532 467899999999999999888754
No 65
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=53.83 E-value=4.9 Score=46.55 Aligned_cols=160 Identities=11% Similarity=-0.011 Sum_probs=84.6
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC---CCCCCcEEEEEeCCCCCCCcChHHHHhcC-CC-----------------cCCc
Q 002429 195 EGAGDCSSCVAVMLELARVMSQWA---HEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-----------------STTI 253 (923)
Q Consensus 195 pGA~Dd~sgva~mLE~ar~L~~~~---~~p~~~I~flf~~~EE~gl~GS~~f~~~h-~~-----------------~~~v 253 (923)
-++-||-.||.+++|+++.+.+.. .......++++++-||.|+.|++.-...- |. +-.-
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~~ 360 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIPK 360 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGGG
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhhc
Confidence 368899999999999998875310 00123445999999999987766522100 00 0112
Q ss_pred eEEEEeecCcCC------------------CCcceee-c---CCCHHHHHHHHHH---hcCCCCcccccccccCCCCC-C
Q 002429 254 RVAVDLEAMGIG------------------GRSALFQ-A---GPNLWAVENFAAV---AKYPSGQIIGQDLFASGVFE-T 307 (923)
Q Consensus 254 ~a~iNlD~~G~g------------------G~~~lfq-~---g~~~~li~~y~~~---a~~p~~~~l~~e~f~~g~ip-s 307 (923)
..+|..|++-+. |+.+-+. . .+++.+...+++. +..|+-... .....+ +
T Consensus 361 S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v-----~r~D~~gG 435 (496)
T 3vat_A 361 SYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLM-----VRNDSPCG 435 (496)
T ss_dssp CEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEEC-----CCTTSCCC
T ss_pred CeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEE-----ecCCCCCc
Confidence 367777764221 2222111 1 1355555544433 233432211 111234 3
Q ss_pred CCchHHhhhcCCCeEEEEeecCCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 002429 308 ATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (923)
Q Consensus 308 ~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la 364 (923)
+|+-.+.....|||.+|+.---- .-||+.-+...-| +.++.+.+.+++..+.
T Consensus 436 gTig~i~~s~~Gi~tvdIGiP~r--yMHS~~E~~~~~D---~~~~v~Ll~af~~~~~ 487 (496)
T 3vat_A 436 TTIGPILASRLGLRVLDLGSPQL--AMHSIRETACTTG---VLQTITLFKGFFELFP 487 (496)
T ss_dssp CCHHHHHHHHHTCEEEEEECEEE--STTSSSEEEESHH---HHHHHHHHHHHHHHHH
T ss_pred chHHHHHhcccCCcEEEecHhhh--ccccHHHHhhHHH---HHHHHHHHHHHHHhHH
Confidence 45544443237999999853211 2599877666544 4455555555555544
No 66
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=47.25 E-value=32 Score=29.55 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=46.0
Q ss_pred CCCCCchHHhhhcCCCeEEEEeecCC-CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 002429 305 FETATDFQVYTEVAGLSGLDFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (923)
Q Consensus 305 ips~TD~~~F~~~~GiPgld~a~~~~-~~~YHT~~Dt~d~i~~~slq~~g~~vl~lv~~la~a 366 (923)
.++.||-+.|+. .|+|.+.+..... ...-|+.. |+++.+.+.+..+....+++.+.+.
T Consensus 23 ~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~ 81 (88)
T 1q7l_B 23 MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASV 81 (88)
T ss_dssp CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred eceeCcHHHHHH-cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcC
Confidence 467899999998 7999988765432 12457653 6788999999999999999999876
No 67
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=35.65 E-value=59 Score=26.21 Aligned_cols=18 Identities=22% Similarity=0.861 Sum_probs=8.7
Q ss_pred CCCCCccchhHHHHHHHHHH
Q 002429 621 PGGTPEWLGNVIFAVVIAVV 640 (923)
Q Consensus 621 ~~~nPd~~~D~iIa~l~a~~ 640 (923)
|..+|-|+ +++|++.++.
T Consensus 4 ~~~vp~Wi--Ii~svl~GLL 21 (54)
T 2l8s_A 4 PGRVPLWV--ILLSAFAGLL 21 (54)
T ss_dssp CCCCCTHH--HHHHHHHHHH
T ss_pred CccCchHH--HHHHHHHHHH
Confidence 34578773 3444443333
No 68
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=32.68 E-value=40 Score=23.31 Aligned_cols=18 Identities=17% Similarity=0.383 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002429 631 VIFAVVIAVVSCLTLVYL 648 (923)
Q Consensus 631 ~iIa~l~a~~t~l~~~~l 648 (923)
-+||.++|+.+++.++|-
T Consensus 7 eviaglvalltflafgfw 24 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFW 24 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 489999999999999984
No 69
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=25.76 E-value=29 Score=39.42 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=41.0
Q ss_pred CCCHHHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEE
Q 002429 104 VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAIL 183 (923)
Q Consensus 104 ~GS~~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vl 183 (923)
..|+..-.+++++.++|++.|.+.-.+ .+.+...+|. .++. -.+..||++...|+.- ....+.++
T Consensus 13 ~~~~t~~h~v~~~~~~l~~~Gf~~l~e----~~~w~l~~g~-----k~~~-----~~~~g~lia~~~G~~~-~~~~~~~i 77 (428)
T 2ijz_A 13 KASPTPFHATASLARRLEAAGYRRLDE----RDAWHTETGG-----RYYV-----TRNDSSLIAIRLGRRS-PLESGFRL 77 (428)
T ss_dssp TTTHHHHHHHCCSHHHHHHHHHHHSCC------------CC-----CCEE-----CTTTTCCEEEECC--C-CSTTCCEE
T ss_pred HcCCCHHHHHHHHHHHHHHcCCeEccc----ccccccCCCC-----EEEE-----ECCCCEEEEEEECCcC-CCCCCcEE
Confidence 456766788999999999988532211 1211111111 1110 0133789998877520 12346899
Q ss_pred EEeeccccC
Q 002429 184 VSSHIDTVS 192 (923)
Q Consensus 184 l~aH~DSv~ 192 (923)
++||.|+..
T Consensus 78 i~AH~Dspg 86 (428)
T 2ijz_A 78 VGAHTDSPC 86 (428)
T ss_dssp EECBCCCSE
T ss_pred EEEcCCcCC
Confidence 999999973
No 70
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=24.06 E-value=93 Score=35.45 Aligned_cols=66 Identities=11% Similarity=-0.032 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhcccccCCcceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEEee
Q 002429 108 ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSH 187 (923)
Q Consensus 108 ~n~~a~~yL~~~l~~i~~~~~~~~~ve~d~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~vll~aH 187 (923)
..-.+++++.++|++-|.+.-.+. +. ...| +.+|. -.+..||++...|+ ....+.++++||
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e~----~~--l~~g-----~k~~~-----~r~~~~lia~~~g~---~~~~g~~ii~AH 92 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLEDF----AG--DPMN-----MTVYA-----VNRGKAIAAFRVVD---DLKRGLNLVVAH 92 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTSC----CS--CTTS-----BCEEE-----ESSSSCEEEEEBCS---CGGGCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHCcCEEcccc----cC--CCCC-----CEEEE-----EcCCCEEEEEEeCC---CCCCCeEEEEEe
Confidence 345788999999999884321111 10 1111 11111 01237899987774 123468999999
Q ss_pred ccccC
Q 002429 188 IDTVS 192 (923)
Q Consensus 188 ~DSv~ 192 (923)
.|+..
T Consensus 93 ~Dsp~ 97 (450)
T 2glf_A 93 IDSPR 97 (450)
T ss_dssp CCCCE
T ss_pred cccCC
Confidence 99864
Done!