Query 002430
Match_columns 923
No_of_seqs 556 out of 3687
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 23:48:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002430.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002430hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 6E-179 1E-183 1455.0 48.8 905 9-923 8-912 (942)
2 KOG0202 Ca2+ transporting ATPa 100.0 5E-145 1E-149 1227.4 57.5 822 18-850 3-970 (972)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 6E-135 1E-139 1232.8 86.4 752 37-808 1-754 (755)
4 PRK10517 magnesium-transportin 100.0 1E-133 2E-138 1234.8 90.3 806 18-848 48-897 (902)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-133 4E-138 1247.5 89.2 819 15-849 3-1048(1053)
6 PRK15122 magnesium-transportin 100.0 5E-133 1E-137 1231.1 89.9 814 18-848 26-897 (903)
7 COG0474 MgtA Cation transport 100.0 1E-133 2E-138 1239.2 79.1 780 15-806 19-870 (917)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 5E-132 1E-136 1221.4 90.9 807 18-849 14-863 (867)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 6E-128 1E-132 1202.5 89.3 831 15-848 13-985 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-126 5E-131 1179.0 90.0 800 17-848 2-882 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 4E-126 9E-131 1183.0 89.3 814 23-845 43-938 (941)
12 KOG0204 Calcium transporting A 100.0 5E-127 1E-131 1078.7 51.3 813 23-845 102-1005(1034)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 4E-117 8E-122 1098.6 83.5 779 66-847 1-917 (917)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 1E-120 2E-125 1026.2 32.3 845 4-850 23-1009(1019)
15 TIGR01657 P-ATPase-V P-type AT 100.0 6E-114 1E-118 1083.4 76.6 751 35-802 137-1022(1054)
16 TIGR01652 ATPase-Plipid phosph 100.0 1E-103 2E-108 993.8 67.6 787 50-853 1-1051(1057)
17 PLN03190 aminophospholipid tra 100.0 1.6E-99 3E-104 945.1 69.2 782 48-854 85-1147(1178)
18 PRK14010 potassium-transportin 100.0 8.7E-98 2E-102 877.6 58.2 546 68-670 28-588 (673)
19 PRK01122 potassium-transportin 100.0 3.1E-94 6.6E-99 848.3 62.3 538 67-660 28-582 (679)
20 KOG0208 Cation transport ATPas 100.0 5.4E-91 1.2E-95 797.1 53.0 702 26-742 149-1011(1140)
21 TIGR01497 kdpB K+-transporting 100.0 1.5E-89 3.2E-94 806.5 61.1 542 68-664 28-587 (675)
22 KOG0206 P-type ATPase [General 100.0 1.6E-92 3.4E-97 851.2 28.8 791 46-857 28-1085(1151)
23 COG2217 ZntA Cation transport 100.0 5.3E-86 1.1E-90 777.5 59.6 505 97-665 173-679 (713)
24 PRK11033 zntA zinc/cadmium/mer 100.0 4.3E-81 9.4E-86 758.3 58.6 499 97-663 205-706 (741)
25 KOG0207 Cation transport ATPas 100.0 2.7E-81 5.7E-86 719.2 40.5 535 100-689 343-889 (951)
26 KOG0210 P-type ATPase [Inorgan 100.0 1.9E-80 4E-85 682.9 43.9 762 45-855 74-1047(1051)
27 TIGR01494 ATPase_P-type ATPase 100.0 6.3E-79 1.4E-83 716.5 54.6 475 105-667 3-483 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 1.5E-76 3.3E-81 702.7 58.8 517 77-664 4-526 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.1E-76 2.3E-81 699.6 55.2 499 76-663 3-504 (536)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 6.1E-76 1.3E-80 695.3 58.4 506 97-679 53-560 (562)
31 PRK10671 copA copper exporting 100.0 7E-75 1.5E-79 717.9 60.7 520 99-681 287-809 (834)
32 KOG0209 P-type ATPase [Inorgan 100.0 6.7E-74 1.5E-78 642.0 48.8 571 22-611 148-832 (1160)
33 COG2216 KdpB High-affinity K+ 100.0 1.1E-63 2.3E-68 538.0 36.2 520 69-644 29-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.1E-35 2.5E-40 315.1 25.0 222 103-324 1-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.8E-26 3.8E-31 241.6 11.4 211 328-605 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 3.4E-15 7.4E-20 135.2 10.4 123 483-636 20-145 (152)
37 PF00690 Cation_ATPase_N: Cati 99.4 4.9E-13 1.1E-17 113.1 7.6 67 19-85 1-69 (69)
38 KOG4383 Uncharacterized conser 99.2 4.8E-09 1E-13 118.0 27.6 209 481-689 814-1129(1354)
39 PF00689 Cation_ATPase_C: Cati 99.2 2E-10 4.3E-15 117.2 15.5 166 673-845 1-182 (182)
40 smart00831 Cation_ATPase_N Cat 99.1 1.6E-10 3.5E-15 96.3 6.6 60 30-89 2-63 (64)
41 TIGR02137 HSK-PSP phosphoserin 98.9 6.3E-09 1.4E-13 107.7 11.6 131 493-640 68-198 (203)
42 PRK11133 serB phosphoserine ph 98.8 1E-08 2.2E-13 113.3 10.6 131 493-637 181-315 (322)
43 TIGR00338 serB phosphoserine p 98.8 1.1E-08 2.3E-13 107.7 10.4 129 493-636 85-218 (219)
44 PF13246 Hydrolase_like2: Puta 98.8 8.9E-09 1.9E-13 92.0 6.9 65 375-440 20-90 (91)
45 PRK01158 phosphoglycolate phos 98.7 1.9E-07 4.1E-12 98.9 13.0 153 486-638 12-226 (230)
46 TIGR02726 phenyl_P_delta pheny 98.7 9.9E-08 2.2E-12 95.4 9.8 100 500-629 41-142 (169)
47 TIGR01487 SPP-like sucrose-pho 98.7 1.1E-07 2.3E-12 99.8 10.5 143 493-635 18-213 (215)
48 TIGR01670 YrbI-phosphatas 3-de 98.6 1E-07 2.3E-12 94.3 8.5 105 501-637 36-148 (154)
49 COG0561 Cof Predicted hydrolas 98.6 4.8E-07 1E-11 98.1 13.4 154 486-639 12-259 (264)
50 PRK10513 sugar phosphate phosp 98.6 4.7E-07 1E-11 98.5 12.6 66 573-638 196-265 (270)
51 COG0560 SerB Phosphoserine pho 98.6 2.6E-07 5.7E-12 96.1 9.9 118 492-624 76-198 (212)
52 TIGR01482 SPP-subfamily Sucros 98.5 6.9E-07 1.5E-11 94.3 11.7 140 493-632 15-212 (225)
53 PRK15126 thiamin pyrimidine py 98.5 5.3E-07 1.1E-11 98.2 10.1 66 573-638 188-259 (272)
54 PRK13582 thrH phosphoserine ph 98.5 8.6E-07 1.9E-11 92.1 11.0 127 493-637 68-195 (205)
55 PRK10976 putative hydrolase; P 98.4 9.3E-07 2E-11 95.9 10.8 66 573-638 190-261 (266)
56 PRK09484 3-deoxy-D-manno-octul 98.4 1.1E-06 2.4E-11 89.6 10.2 108 500-639 55-170 (183)
57 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 9.9E-07 2.1E-11 91.2 9.6 117 493-622 80-200 (201)
58 PF08282 Hydrolase_3: haloacid 98.3 1.3E-06 2.9E-11 93.1 8.8 146 492-637 14-254 (254)
59 TIGR03333 salvage_mtnX 2-hydro 98.3 3.5E-06 7.6E-11 88.3 11.6 135 492-637 69-208 (214)
60 PRK08238 hypothetical protein; 98.3 0.00014 3E-09 84.9 25.4 100 493-617 72-171 (479)
61 PRK10530 pyridoxal phosphate ( 98.3 3.3E-06 7.2E-11 91.8 11.2 66 573-638 199-268 (272)
62 PF12710 HAD: haloacid dehalog 98.3 9.6E-07 2.1E-11 90.5 6.5 92 496-602 92-192 (192)
63 PLN02887 hydrolase family prot 98.3 3.1E-06 6.7E-11 100.2 11.3 52 587-638 525-576 (580)
64 KOG1615 Phosphoserine phosphat 98.3 2.6E-06 5.7E-11 83.6 7.9 109 494-611 89-199 (227)
65 TIGR00099 Cof-subfamily Cof su 98.2 5.9E-06 1.3E-10 89.1 10.7 63 573-635 188-254 (256)
66 TIGR01486 HAD-SF-IIB-MPGP mann 98.1 1.8E-05 4E-10 85.3 12.5 66 573-638 176-253 (256)
67 PLN02954 phosphoserine phospha 98.1 2E-05 4.3E-10 83.1 12.4 131 493-635 84-221 (224)
68 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1.3E-05 2.9E-10 81.7 9.1 113 492-609 71-186 (188)
69 COG1778 Low specificity phosph 98.0 1.2E-05 2.5E-10 76.7 7.4 113 500-644 42-162 (170)
70 PRK03669 mannosyl-3-phosphogly 98.0 4.3E-05 9.3E-10 83.2 12.8 67 573-639 187-266 (271)
71 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.4E-05 3E-10 80.8 6.9 100 494-604 74-177 (177)
72 PRK00192 mannosyl-3-phosphogly 98.0 7.6E-05 1.7E-09 81.3 13.0 66 573-638 190-267 (273)
73 PRK09552 mtnX 2-hydroxy-3-keto 97.9 3.9E-05 8.5E-10 80.7 10.2 133 493-637 74-212 (219)
74 PRK13222 phosphoglycolate phos 97.8 8.9E-05 1.9E-09 78.1 10.7 125 492-639 92-223 (226)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 4.5E-05 9.7E-10 79.0 8.1 109 491-611 85-197 (202)
76 cd01427 HAD_like Haloacid deha 97.7 7.7E-05 1.7E-09 71.0 7.0 118 489-609 20-138 (139)
77 COG0546 Gph Predicted phosphat 97.7 0.00022 4.7E-09 75.1 10.2 126 491-637 87-217 (220)
78 TIGR01454 AHBA_synth_RP 3-amin 97.6 0.00029 6.2E-09 73.2 9.7 124 493-637 75-203 (205)
79 PRK13223 phosphoglycolate phos 97.3 0.00091 2E-08 72.8 10.0 125 492-637 100-229 (272)
80 TIGR01485 SPP_plant-cyano sucr 97.3 0.00091 2E-08 71.8 9.4 147 492-638 20-244 (249)
81 TIGR02461 osmo_MPG_phos mannos 97.3 0.00093 2E-08 70.5 9.3 43 491-533 13-55 (225)
82 PRK13288 pyrophosphatase PpaX; 97.3 0.001 2.2E-08 69.6 9.3 124 493-637 82-210 (214)
83 TIGR01449 PGP_bact 2-phosphogl 97.1 0.0013 2.8E-08 68.6 8.3 119 493-634 85-210 (213)
84 TIGR02471 sucr_syn_bact_C sucr 97.1 0.00051 1.1E-08 73.1 5.1 67 572-638 158-232 (236)
85 PRK10187 trehalose-6-phosphate 97.1 0.0039 8.5E-08 67.5 11.2 131 493-627 36-232 (266)
86 TIGR02463 MPGP_rel mannosyl-3- 97.0 0.0038 8.2E-08 65.6 10.8 38 496-533 19-56 (221)
87 TIGR01544 HAD-SF-IE haloacid d 96.9 0.0086 1.9E-07 64.5 12.0 132 492-637 120-273 (277)
88 PRK10826 2-deoxyglucose-6-phos 96.9 0.0031 6.6E-08 66.4 8.5 119 492-634 91-216 (222)
89 PRK13225 phosphoglycolate phos 96.9 0.007 1.5E-07 65.8 11.2 118 493-637 142-267 (273)
90 TIGR03351 PhnX-like phosphonat 96.8 0.0044 9.5E-08 65.0 9.1 121 492-635 86-217 (220)
91 PRK13226 phosphoglycolate phos 96.8 0.0043 9.3E-08 65.7 8.9 123 493-636 95-223 (229)
92 PRK11590 hypothetical protein; 96.7 0.0076 1.6E-07 63.0 9.4 107 493-612 95-203 (211)
93 TIGR01548 HAD-SF-IA-hyp1 haloa 96.5 0.0028 6.2E-08 65.3 5.1 94 491-604 104-197 (197)
94 PRK12702 mannosyl-3-phosphogly 96.5 0.016 3.4E-07 62.5 10.6 42 493-534 18-59 (302)
95 PRK13478 phosphonoacetaldehyde 96.5 0.016 3.4E-07 63.0 10.7 93 493-606 101-197 (267)
96 PLN03243 haloacid dehalogenase 96.5 0.012 2.7E-07 63.4 9.5 120 493-633 109-230 (260)
97 TIGR01545 YfhB_g-proteo haloac 96.4 0.011 2.3E-07 61.8 8.4 106 493-611 94-201 (210)
98 TIGR01422 phosphonatase phosph 96.4 0.017 3.8E-07 62.0 10.2 94 493-607 99-196 (253)
99 PRK06698 bifunctional 5'-methy 96.3 0.012 2.5E-07 69.2 9.1 123 493-639 330-455 (459)
100 PLN02382 probable sucrose-phos 96.3 0.0059 1.3E-07 70.3 6.1 70 568-637 168-256 (413)
101 PRK14502 bifunctional mannosyl 96.2 0.022 4.8E-07 68.0 10.7 48 486-533 425-473 (694)
102 PLN02770 haloacid dehalogenase 96.1 0.029 6.4E-07 60.1 10.2 117 493-628 108-228 (248)
103 TIGR01672 AphA HAD superfamily 96.1 0.01 2.2E-07 62.8 6.1 88 494-607 115-206 (237)
104 PRK11587 putative phosphatase; 96.0 0.026 5.7E-07 59.1 9.1 112 493-626 83-198 (218)
105 PRK14501 putative bifunctional 96.0 0.057 1.2E-06 67.2 13.4 170 449-637 481-720 (726)
106 TIGR01484 HAD-SF-IIB HAD-super 96.0 0.021 4.7E-07 59.0 8.2 39 493-531 17-55 (204)
107 PRK11009 aphA acid phosphatase 96.0 0.013 2.9E-07 61.9 6.5 87 493-607 114-206 (237)
108 TIGR02253 CTE7 HAD superfamily 95.9 0.02 4.3E-07 60.0 7.6 97 493-611 94-195 (221)
109 COG4359 Uncharacterized conser 95.9 0.015 3.3E-07 57.2 5.6 111 493-609 73-183 (220)
110 PHA02530 pseT polynucleotide k 95.6 0.028 6.1E-07 62.0 7.7 108 490-608 184-292 (300)
111 PRK08942 D,D-heptose 1,7-bisph 95.6 0.062 1.4E-06 54.5 9.5 127 493-637 29-176 (181)
112 COG4030 Uncharacterized protei 95.6 0.09 2E-06 53.5 9.9 141 494-638 84-262 (315)
113 TIGR01428 HAD_type_II 2-haloal 95.5 0.034 7.3E-07 57.3 7.3 94 493-607 92-187 (198)
114 PLN02779 haloacid dehalogenase 95.3 0.054 1.2E-06 59.4 8.2 114 493-626 144-263 (286)
115 TIGR01990 bPGM beta-phosphoglu 95.2 0.027 5.8E-07 57.2 5.2 91 493-607 87-180 (185)
116 TIGR01662 HAD-SF-IIIA HAD-supe 95.2 0.065 1.4E-06 51.2 7.6 92 492-606 24-125 (132)
117 PF13419 HAD_2: Haloacid dehal 95.1 0.018 4E-07 57.2 3.5 97 492-607 76-172 (176)
118 TIGR02254 YjjG/YfnB HAD superf 94.9 0.06 1.3E-06 56.4 7.1 119 493-635 97-222 (224)
119 PLN02575 haloacid dehalogenase 94.9 0.11 2.4E-06 58.7 9.4 118 493-633 216-337 (381)
120 TIGR01509 HAD-SF-IA-v3 haloaci 94.8 0.075 1.6E-06 53.6 7.1 94 493-606 85-178 (183)
121 PRK06769 hypothetical protein; 94.8 0.075 1.6E-06 53.6 7.0 99 494-610 29-135 (173)
122 PRK14988 GMP/IMP nucleotidase; 94.7 0.063 1.4E-06 56.6 6.5 99 493-612 93-195 (224)
123 TIGR01685 MDP-1 magnesium-depe 94.5 0.091 2E-06 52.9 6.9 109 486-610 38-155 (174)
124 TIGR02009 PGMB-YQAB-SF beta-ph 94.4 0.055 1.2E-06 54.8 5.1 92 493-607 88-181 (185)
125 COG2179 Predicted hydrolase of 94.3 0.31 6.8E-06 47.7 9.7 109 451-606 19-132 (175)
126 PLN02940 riboflavin kinase 94.3 0.1 2.3E-06 59.6 7.6 112 493-625 93-210 (382)
127 PTZ00174 phosphomannomutase; P 94.3 0.034 7.5E-07 59.6 3.4 58 568-625 181-245 (247)
128 smart00775 LNS2 LNS2 domain. T 94.2 0.25 5.4E-06 49.0 9.2 102 491-606 25-140 (157)
129 PRK09449 dUMP phosphatase; Pro 94.2 0.13 2.9E-06 53.9 7.7 120 493-637 95-222 (224)
130 TIGR01668 YqeG_hyp_ppase HAD s 93.4 0.16 3.4E-06 51.1 6.2 85 492-607 42-131 (170)
131 TIGR01656 Histidinol-ppas hist 93.4 0.14 3E-06 50.2 5.7 97 493-607 27-140 (147)
132 TIGR00213 GmhB_yaeD D,D-heptos 93.3 0.35 7.5E-06 48.9 8.5 26 494-519 27-52 (176)
133 PF06888 Put_Phosphatase: Puta 93.2 0.26 5.6E-06 52.0 7.5 103 493-602 71-187 (234)
134 TIGR01549 HAD-SF-IA-v1 haloaci 92.9 0.11 2.4E-06 50.9 4.2 88 494-605 65-154 (154)
135 TIGR01533 lipo_e_P4 5'-nucleot 92.8 0.5 1.1E-05 50.9 9.2 87 491-602 116-205 (266)
136 TIGR02252 DREG-2 REG-2-like, H 92.8 0.22 4.8E-06 51.4 6.3 91 493-606 105-199 (203)
137 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.7 1.1 2.5E-05 47.6 11.9 94 486-605 17-115 (242)
138 TIGR00685 T6PP trehalose-phosp 91.9 0.27 5.8E-06 52.6 5.8 66 568-637 162-239 (244)
139 PRK05446 imidazole glycerol-ph 91.9 0.4 8.8E-06 53.8 7.3 97 492-608 29-144 (354)
140 TIGR01261 hisB_Nterm histidino 91.8 0.23 5.1E-06 49.4 4.9 98 493-610 29-145 (161)
141 smart00577 CPDc catalytic doma 91.6 0.25 5.3E-06 48.5 4.8 93 492-609 44-139 (148)
142 PF05116 S6PP: Sucrose-6F-phos 91.2 0.3 6.5E-06 52.3 5.2 45 572-616 164-212 (247)
143 PLN02811 hydrolase 90.9 0.41 9E-06 50.2 6.0 98 493-609 78-181 (220)
144 TIGR01691 enolase-ppase 2,3-di 89.9 0.55 1.2E-05 49.3 5.8 99 491-610 93-194 (220)
145 PLN02919 haloacid dehalogenase 89.8 1.4 3E-05 57.2 10.4 124 494-637 162-291 (1057)
146 KOG3120 Predicted haloacid deh 89.7 1.7 3.7E-05 44.5 8.7 112 493-611 84-209 (256)
147 TIGR01681 HAD-SF-IIIC HAD-supe 89.3 1.1 2.4E-05 42.6 7.0 39 493-531 29-68 (128)
148 TIGR01675 plant-AP plant acid 89.0 1.9 4.2E-05 45.3 8.9 87 492-598 119-209 (229)
149 PLN02205 alpha,alpha-trehalose 88.8 2.2 4.8E-05 53.8 10.8 67 450-529 586-653 (854)
150 TIGR02247 HAD-1A3-hyp Epoxide 88.7 0.41 8.8E-06 49.7 3.8 95 492-607 93-191 (211)
151 TIGR01664 DNA-3'-Pase DNA 3'-p 88.3 1.2 2.7E-05 44.5 6.7 40 494-533 43-94 (166)
152 PF09419 PGP_phosphatase: Mito 87.5 1.9 4.1E-05 43.1 7.3 102 455-600 36-152 (168)
153 PLN02580 trehalose-phosphatase 86.7 1.2 2.7E-05 50.3 6.2 67 567-637 292-373 (384)
154 PLN03017 trehalose-phosphatase 86.4 13 0.00027 42.0 13.9 44 483-527 121-166 (366)
155 PRK09456 ?-D-glucose-1-phospha 84.4 1.7 3.8E-05 44.6 5.7 95 493-608 84-181 (199)
156 PRK10563 6-phosphogluconate ph 84.0 1.5 3.3E-05 45.8 5.1 97 493-610 88-184 (221)
157 PHA02597 30.2 hypothetical pro 83.7 1.9 4.2E-05 44.1 5.7 93 493-608 74-170 (197)
158 COG3769 Predicted hydrolase (H 83.4 7.5 0.00016 40.0 9.2 37 497-533 27-63 (274)
159 PLN02645 phosphoglycolate phos 83.3 2.5 5.4E-05 47.0 6.7 47 486-532 37-86 (311)
160 PF13344 Hydrolase_6: Haloacid 81.9 1.2 2.7E-05 40.4 3.0 48 486-533 7-57 (101)
161 TIGR01686 FkbH FkbH-like domai 81.3 3 6.6E-05 46.5 6.4 91 493-611 31-129 (320)
162 TIGR01993 Pyr-5-nucltdase pyri 79.4 2 4.2E-05 43.5 3.8 92 493-607 84-180 (184)
163 PRK10725 fructose-1-P/6-phosph 76.8 3.6 7.9E-05 41.6 4.9 92 495-607 90-181 (188)
164 COG0241 HisB Histidinol phosph 71.6 8.6 0.00019 38.9 5.9 98 494-610 32-146 (181)
165 PF03767 Acid_phosphat_B: HAD 69.6 9.7 0.00021 40.2 6.1 89 493-600 115-207 (229)
166 PRK10444 UMP phosphatase; Prov 68.1 5.8 0.00013 42.5 4.1 45 486-530 10-54 (248)
167 KOG3040 Predicted sugar phosph 67.2 11 0.00024 38.4 5.5 47 483-529 13-59 (262)
168 COG1011 Predicted hydrolase (H 66.9 15 0.00033 38.2 7.0 41 493-534 99-139 (229)
169 TIGR01684 viral_ppase viral ph 66.3 9.6 0.00021 41.5 5.3 41 494-534 146-187 (301)
170 TIGR01458 HAD-SF-IIA-hyp3 HAD- 66.2 7.8 0.00017 41.7 4.7 48 486-533 10-64 (257)
171 PHA03398 viral phosphatase sup 65.5 10 0.00023 41.3 5.3 41 494-534 148-189 (303)
172 TIGR01647 ATPase-IIIA_H plasma 63.6 92 0.002 39.2 14.0 193 106-308 60-262 (755)
173 PF08235 LNS2: LNS2 (Lipin/Ned 61.5 39 0.00084 33.4 8.0 103 492-607 26-141 (157)
174 TIGR01517 ATPase-IIB_Ca plasma 61.4 63 0.0014 41.8 12.3 21 142-162 186-206 (941)
175 TIGR01457 HAD-SF-IIA-hyp2 HAD- 60.7 15 0.00032 39.3 5.6 48 486-533 10-60 (249)
176 PLN02151 trehalose-phosphatase 59.7 1.2E+02 0.0026 34.3 12.5 61 573-637 269-341 (354)
177 PLN02423 phosphomannomutase 59.6 13 0.00029 39.6 5.0 43 572-615 188-235 (245)
178 TIGR01680 Veg_Stor_Prot vegeta 58.8 52 0.0011 35.5 9.0 88 491-598 143-235 (275)
179 PLN02177 glycerol-3-phosphate 58.2 34 0.00074 40.5 8.4 122 494-634 111-241 (497)
180 PRK10748 flavin mononucleotide 57.7 15 0.00032 39.0 4.9 91 493-610 113-206 (238)
181 TIGR02251 HIF-SF_euk Dullard-l 57.5 8.2 0.00018 38.4 2.7 42 491-533 40-81 (162)
182 COG0637 Predicted phosphatase/ 57.4 21 0.00046 37.4 5.9 99 492-609 85-183 (221)
183 PTZ00445 p36-lilke protein; Pr 55.7 24 0.00052 36.5 5.7 63 445-520 28-102 (219)
184 TIGR01493 HAD-SF-IA-v2 Haloaci 54.5 15 0.00033 36.5 4.1 84 493-604 90-175 (175)
185 COG0474 MgtA Cation transport 54.5 1.3E+02 0.0027 38.9 13.2 270 19-306 42-330 (917)
186 COG3700 AphA Acid phosphatase 53.7 25 0.00054 35.0 5.1 90 494-610 115-210 (237)
187 PRK14194 bifunctional 5,10-met 51.9 53 0.0012 36.1 8.0 137 490-627 12-209 (301)
188 TIGR01458 HAD-SF-IIA-hyp3 HAD- 50.2 19 0.0004 38.8 4.2 118 496-636 123-253 (257)
189 PF13380 CoA_binding_2: CoA bi 50.0 13 0.00029 34.6 2.7 79 450-532 18-103 (116)
190 TIGR01663 PNK-3'Pase polynucle 48.8 38 0.00082 40.4 6.8 40 494-533 198-249 (526)
191 COG5547 Small integral membran 48.5 94 0.002 24.9 6.5 49 65-121 2-52 (62)
192 cd04728 ThiG Thiazole synthase 46.3 4E+02 0.0086 28.5 14.8 52 478-529 89-143 (248)
193 PRK14179 bifunctional 5,10-met 45.7 75 0.0016 34.7 7.9 138 490-627 10-208 (284)
194 TIGR02244 HAD-IG-Ncltidse HAD 45.2 68 0.0015 36.0 7.7 37 495-531 186-223 (343)
195 TIGR01689 EcbF-BcbF capsule bi 45.2 23 0.00049 33.7 3.4 31 492-522 23-53 (126)
196 PF12368 DUF3650: Protein of u 44.7 17 0.00038 24.6 1.8 15 35-49 13-27 (28)
197 PF00122 E1-E2_ATPase: E1-E2 A 43.5 1.4E+02 0.0031 31.0 9.7 193 107-309 2-211 (230)
198 PF03120 DNA_ligase_OB: NAD-de 43.3 13 0.00028 32.4 1.3 22 148-169 45-67 (82)
199 COG0647 NagD Predicted sugar p 42.9 29 0.00063 37.5 4.2 47 484-530 15-61 (269)
200 PRK00208 thiG thiazole synthas 42.7 4.5E+02 0.0098 28.1 15.1 52 478-529 89-143 (250)
201 PRK14188 bifunctional 5,10-met 42.6 81 0.0018 34.7 7.7 45 490-534 10-64 (296)
202 PRK11507 ribosome-associated p 42.5 29 0.00062 29.3 3.1 26 138-163 38-63 (70)
203 PRK11840 bifunctional sulfur c 42.0 1.6E+02 0.0034 32.8 9.6 52 478-529 163-217 (326)
204 TIGR01452 PGP_euk phosphoglyco 41.2 30 0.00065 37.6 4.2 48 486-533 11-61 (279)
205 PF10777 YlaC: Inner membrane 40.9 51 0.0011 31.8 4.9 49 785-840 33-81 (155)
206 PTZ00174 phosphomannomutase; P 40.8 37 0.00081 36.1 4.7 40 486-525 14-54 (247)
207 TIGR00262 trpA tryptophan synt 39.3 1.1E+02 0.0024 32.8 8.1 41 490-530 121-163 (256)
208 PLN02591 tryptophan synthase 38.9 1.5E+02 0.0031 31.9 8.7 82 494-597 116-200 (250)
209 TIGR01116 ATPase-IIA1_Ca sarco 38.5 9.9E+02 0.022 30.9 26.8 136 704-842 762-915 (917)
210 PRK14174 bifunctional 5,10-met 38.1 1E+02 0.0023 33.8 7.6 45 490-534 9-63 (295)
211 PF05822 UMPH-1: Pyrimidine 5' 37.7 1.3E+02 0.0029 32.0 8.0 134 492-637 89-241 (246)
212 PF13275 S4_2: S4 domain; PDB: 36.8 21 0.00045 29.7 1.5 24 138-161 34-57 (65)
213 TIGR01657 P-ATPase-V P-type AT 36.8 1.1E+03 0.024 31.0 19.6 214 104-346 196-450 (1054)
214 COG0272 Lig NAD-dependent DNA 35.2 66 0.0014 39.0 5.8 67 148-223 363-430 (667)
215 TIGR01494 ATPase_P-type ATPase 35.1 1.9E+02 0.0041 34.4 10.0 147 141-306 53-212 (499)
216 PRK05585 yajC preprotein trans 35.1 2.9E+02 0.0063 25.4 8.8 46 97-142 17-62 (106)
217 TIGR01522 ATPase-IIA2_Ca golgi 34.6 5E+02 0.011 33.4 14.2 32 275-306 275-306 (884)
218 PRK01122 potassium-transportin 34.2 3.8E+02 0.0082 33.3 12.3 82 99-189 63-147 (679)
219 KOG0210 P-type ATPase [Inorgan 33.5 2.3E+02 0.0049 34.6 9.6 27 495-521 713-739 (1051)
220 PF14336 DUF4392: Domain of un 33.4 74 0.0016 35.0 5.6 37 496-532 63-100 (291)
221 TIGR01524 ATPase-IIIB_Mg magne 33.4 8.8E+02 0.019 31.1 16.0 20 143-162 152-171 (867)
222 PRK14184 bifunctional 5,10-met 32.4 1.5E+02 0.0033 32.4 7.6 138 490-627 9-211 (286)
223 PF12710 HAD: haloacid dehalog 32.0 23 0.0005 35.6 1.3 16 331-346 1-16 (192)
224 COG0279 GmhA Phosphoheptose is 31.6 1.2E+02 0.0027 30.1 6.0 58 440-521 91-148 (176)
225 PF12689 Acid_PPase: Acid Phos 31.4 82 0.0018 31.6 5.0 40 494-533 46-86 (169)
226 PRK15122 magnesium-transportin 31.1 1.1E+03 0.025 30.3 16.5 21 142-162 174-194 (903)
227 KOG0205 Plasma membrane H+-tra 30.6 2.1 4.6E-05 50.3 -7.0 180 483-662 432-652 (942)
228 PF01455 HupF_HypC: HupF/HypC 30.6 1.1E+02 0.0025 25.6 5.0 33 134-166 16-51 (68)
229 COG1188 Ribosome-associated he 30.6 60 0.0013 29.4 3.4 31 136-167 33-63 (100)
230 PF06506 PrpR_N: Propionate ca 30.4 2.5E+02 0.0055 28.1 8.6 106 497-649 65-172 (176)
231 PF00389 2-Hacid_dh: D-isomer 29.7 4.8E+02 0.01 24.5 10.7 45 566-611 43-89 (133)
232 PRK09479 glpX fructose 1,6-bis 29.1 1.6E+02 0.0035 32.4 7.0 105 488-602 161-282 (319)
233 TIGR01456 CECR5 HAD-superfamil 28.8 1.7E+02 0.0038 32.5 7.8 49 485-533 8-64 (321)
234 TIGR00612 ispG_gcpE 1-hydroxy- 28.8 1E+02 0.0023 34.1 5.6 148 445-614 150-319 (346)
235 TIGR02250 FCP1_euk FCP1-like p 28.2 86 0.0019 30.9 4.6 42 491-533 56-97 (156)
236 TIGR01106 ATPase-IIC_X-K sodiu 27.9 1.4E+03 0.03 29.9 16.6 20 143-162 162-181 (997)
237 PRK14169 bifunctional 5,10-met 27.8 95 0.0021 33.8 5.2 45 490-534 9-62 (282)
238 PRK14170 bifunctional 5,10-met 27.5 93 0.002 33.9 5.0 45 490-534 10-63 (284)
239 PRK14175 bifunctional 5,10-met 27.5 90 0.002 34.1 4.9 45 490-534 11-64 (286)
240 PF15584 Imm44: Immunity prote 26.7 32 0.00069 30.4 1.0 20 155-174 13-32 (94)
241 cd01516 FBPase_glpX Bacterial 26.4 1.9E+02 0.0042 31.6 7.0 105 488-602 158-279 (309)
242 PRK14191 bifunctional 5,10-met 25.7 1E+02 0.0022 33.7 4.9 45 490-534 9-63 (285)
243 PF06738 DUF1212: Protein of u 25.5 3.3E+02 0.0072 27.5 8.6 82 14-114 59-141 (193)
244 CHL00200 trpA tryptophan synth 25.2 2.8E+02 0.006 30.0 8.1 30 571-600 187-216 (263)
245 TIGR00739 yajC preprotein tran 25.2 4.3E+02 0.0094 23.1 7.8 25 118-142 23-47 (84)
246 PF11694 DUF3290: Protein of u 25.1 2.2E+02 0.0047 28.0 6.6 67 95-163 43-116 (149)
247 PRK00652 lpxK tetraacyldisacch 25.0 1.6E+02 0.0034 32.9 6.4 57 576-632 70-154 (325)
248 PRK15424 propionate catabolism 24.6 6.9E+02 0.015 30.1 12.0 102 497-645 95-197 (538)
249 PRK14167 bifunctional 5,10-met 24.4 1.2E+02 0.0025 33.4 5.1 45 490-534 10-63 (297)
250 PRK12415 fructose 1,6-bisphosp 24.1 2.2E+02 0.0048 31.4 7.0 105 488-602 159-280 (322)
251 TIGR01460 HAD-SF-IIA Haloacid 23.5 1E+02 0.0022 32.6 4.4 35 486-520 7-41 (236)
252 PRK10234 DNA-binding transcrip 23.4 5.1E+02 0.011 24.4 8.3 62 106-176 11-73 (118)
253 PRK10517 magnesium-transportin 23.4 1.7E+03 0.036 28.8 17.0 90 100-194 121-212 (902)
254 PRK14189 bifunctional 5,10-met 23.1 1.2E+02 0.0025 33.3 4.8 45 490-534 11-64 (285)
255 PRK14190 bifunctional 5,10-met 22.5 1.2E+02 0.0027 33.0 4.9 138 490-627 11-208 (284)
256 cd05017 SIS_PGI_PMI_1 The memb 22.5 1.3E+02 0.0027 28.0 4.4 36 495-532 56-91 (119)
257 TIGR01459 HAD-SF-IIA-hyp4 HAD- 21.7 71 0.0015 33.8 2.8 91 495-607 140-236 (242)
258 TIGR00330 glpX fructose-1,6-bi 21.7 2.8E+02 0.0061 30.4 7.1 38 488-527 158-195 (321)
259 COG1606 ATP-utilizing enzymes 21.7 5.4E+02 0.012 27.6 9.0 32 506-537 39-77 (269)
260 PRK14178 bifunctional 5,10-met 21.6 2.8E+02 0.0061 30.2 7.3 64 564-627 129-202 (279)
261 PRK14182 bifunctional 5,10-met 21.6 1.5E+02 0.0033 32.3 5.3 45 490-534 9-62 (282)
262 PF09926 DUF2158: Uncharacteri 21.4 60 0.0013 25.8 1.6 12 154-165 2-13 (53)
263 TIGR00739 yajC preprotein tran 20.8 1.7E+02 0.0036 25.7 4.4 41 107-164 9-49 (84)
264 PRK14166 bifunctional 5,10-met 20.5 1.7E+02 0.0036 32.0 5.3 45 490-534 9-62 (282)
265 PRK10671 copA copper exporting 20.2 8.4E+02 0.018 31.1 12.4 95 108-213 293-394 (834)
266 PRK05886 yajC preprotein trans 20.2 2.1E+02 0.0046 26.5 5.1 48 100-164 3-50 (109)
267 PF02219 MTHFR: Methylenetetra 20.1 80 0.0017 34.6 2.8 39 483-521 72-111 (287)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-179 Score=1455.02 Aligned_cols=905 Identities=87% Similarity=1.318 Sum_probs=887.3
Q ss_pred hHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 002430 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (923)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l 88 (923)
+++.++|..|.+..|.|+|+++|.|+..|||++|+++|+++||+|+++++|++.+++|+.+||+|+.|+|+++|++++.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeec
Q 002430 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (923)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IP 168 (923)
.++++.+++|.|+++|++++++|+.++|+||++++++.++|++.++++++|+|||+|.++++++||||||+.++.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccCCCCcHHHHHHHH
Q 002430 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (923)
Q Consensus 169 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i 248 (923)
||+||++|+.++||+|+|||||.||.|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+|||+.++.|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCc
Q 002430 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (923)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v 328 (923)
+++|++++++.+++.+.++|+.+.+.++..+.+.+++++..||.+||.++++++++|+.||+++|+++|+++++|+|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCC
Q 002430 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (923)
Q Consensus 329 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~ 408 (923)
|++|+|||||||.|+++|.+..++.+..+.++++++..|+++++.+++|++|.|+++++.||++++.+|+.++++||||.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888788899999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEe
Q 002430 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (923)
Q Consensus 409 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i 488 (923)
+||.+..+.+++|+++.++||||+.|+++|+.++++++.+++.+++|+++|+|.|++|++..+++..+..+.+|+|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
.+.||||+|+.++|.+....|++|+|+|||+...+++++|++|+.+|+|++..+.|...++.+.+.++++++++++.||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~ 648 (923)
+.|+||+++|+.||++||+|+|+|||+||+||||+||+|||+.+++|+|+.+||+||+++++|.|+.++..+|.+|+||+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 002430 649 NYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIM 728 (923)
Q Consensus 649 ~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~ 728 (923)
+|.+|+++.++.+++.++...+.|.+.|+|++++++.+++|++.|++++|+++|+|.|++|+++++|..++++|.|+++.
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 002430 729 TVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (923)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (923)
+..+||..+.+.|++..||+.....+..+.....|+++++.+++++|++|+++|+|.++|+++++.+++.++++++++++
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888889999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhccccccccccCChhHHHHHHHHHhhhhh
Q 002430 809 YANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLH 888 (923)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (923)
|++|.+.+..++.|.|..++|++++..+++.++.|+..||..++++|+..++.+.++.++++|++++|.++|+.+||++|
T Consensus 808 ya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~ 887 (942)
T KOG0205|consen 808 YANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLH 887 (942)
T ss_pred HheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccCCcchhhhhHHHHHHHhhhhhcC
Q 002430 889 GLQPPETNGIFSDKNSYRELSEIAEQAKRRAEVAR 923 (923)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (923)
+.+.++. ++++++++|++||+|+||
T Consensus 888 ~lq~~~~----------~~~~~~a~~~~~~ae~~r 912 (942)
T KOG0205|consen 888 GLQPPEG----------RELSEIAEEAKRRAEIAR 912 (942)
T ss_pred ccCCCcc----------chhhHHHHHHhhhhhhhh
Confidence 9998862 589999999999999986
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-145 Score=1227.42 Aligned_cols=822 Identities=29% Similarity=0.423 Sum_probs=680.2
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCC
Q 002430 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~ 95 (923)
+.|..+.+|++..+.++ ++|||++|+.+|+++||+|+++... .+.|+++++||.||+..+|+++|++|+++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 46778999999999998 6799999999999999999998654 899999999999999999999999999997
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe
Q 002430 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (923)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 175 (923)
.|.++++|.+++++|++++++||||++|++++|+++.|+.++|+|+|+.+.++++||||||||.|+-||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCC--------------CCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCc
Q 002430 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (923)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~ 240 (923)
..++.||||+|||||.||.|.. .|++|+||.|..|.++|+|+.||.+|++|++.+.++..+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998874 6999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc---c-c---cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhc
Q 002430 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV---Q-H---RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (923)
Q Consensus 241 ~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~---~-~---~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~ 311 (923)
+|+.++.+++.+.-.+.+..+..+++ .|+. . + ..+.+.+..++++.+++||+|||+++++++++|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988653332222222322 2221 1 2 345567788899999999999999999999999999999
Q ss_pred CCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc-----------cCC------------------ChH-
Q 002430 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------KGV------------------EKE- 361 (923)
Q Consensus 312 ~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-----------~~~------------------~~~- 361 (923)
++++||++.++|+||.+++||||||||||+|+|++.++++.... .++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999997752110 001 111
Q ss_pred --HHHHHHHHHccc------c-----CcchHHHHHHHhcC-----Chhh--------------hhcCceeEEeecCCCCC
Q 002430 362 --HVILLAARASRT------E-----NQDAIDAAIVGMLA-----DPKE--------------ARAGVREVHFLPFNPVD 409 (923)
Q Consensus 362 --~~l~~a~~~~~~------~-----~~~~~~~ai~~~~~-----~~~~--------------~~~~~~~l~~~~F~s~~ 409 (923)
+++..++.|... . .++|+|.|+...+. +... ....++...++||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 223333333211 1 34688888765541 1110 11223455899999999
Q ss_pred cceEEEEEecCCc--EEEEEcCcHHHHHHhccC------------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--
Q 002430 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-- 473 (923)
Q Consensus 410 k~~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~-- 473 (923)
|+|++.+.+..|+ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|+|++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999953 345688999999999999999999999977631
Q ss_pred ---------CCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCC--CCCCcc
Q 002430 474 ---------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--YPSSSL 542 (923)
Q Consensus 474 ---------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~--~~~~~l 542 (923)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||.+|||++|+..+. .....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 244678999999999999999999999999999999999999999999999999999997543 234567
Q ss_pred cCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhcc
Q 002430 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (923)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aA 621 (923)
+|.+.+ .++++++++.+.+..+|||++|+||.+||++||++|++|||||||+||+||||+|||||||| +|||+||+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 777665 88999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHHhccc-ccccccCC
Q 002430 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 699 (923)
Q Consensus 622 Divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~ 699 (923)
|+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+..+++ ..+.++.|+.|+|+||+|+++|++ +++|++++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 9999999999999999999999999999999999999976665554 556789999999999999999987 69999999
Q ss_pred CCCC---CCCCchh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcccc----------CC------CHH
Q 002430 700 VKPS---PQPDSWK----LKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSL----------RT------RPD 756 (923)
Q Consensus 700 ~~~~---~~p~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------~~------~~~ 756 (923)
+++. ++|++++ ...++...+..|+++.+.++..|++.+... .+...++.. .. ...
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~ 872 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDM 872 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC--CCCcChhhhcchhhhcccccccchhhhccc
Confidence 8775 2233322 345666667779999998886655443211 111111000 00 001
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchhhHHHHHHHH
Q 002430 757 EMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLY 831 (923)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 831 (923)
...|+.|..+++...++.+++|+...+.+.. .+.|+++++.++.+... ..+|.+ -..++..+++|.-|++++.+
T Consensus 873 ~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f-~ilYvp~l~~iFq~~~l~~~ew~~vl~~ 951 (972)
T KOG0202|consen 873 CPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHF-LVLYVPPLQRIFQTEPLSLAEWLLVLAI 951 (972)
T ss_pred ccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhh-eEEEechhhhhheecCCcHHHHHHHHHH
Confidence 1237788888999999999999987553322 23388888888876654 446654 12345777777777777899
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 002430 832 SLVTYFPLDILKFGIRYIL 850 (923)
Q Consensus 832 ~~~~~~~~~~~K~~~~~~~ 850 (923)
+..+++++|++|++.|++.
T Consensus 952 s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 952 SSPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhhHHHHHHHHHHhcc
Confidence 9999999999999998765
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=6.1e-135 Score=1232.77 Aligned_cols=752 Identities=60% Similarity=0.945 Sum_probs=675.0
Q ss_pred CCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 002430 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (923)
Q Consensus 37 GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (923)
|||++||++|+++||+|++++++++.|+.|+++|++|++|+|+++++++++++ +|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999986 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecC
Q 002430 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (923)
Q Consensus 117 ~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~ 196 (923)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|+
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 002430 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (923)
Q Consensus 197 ~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (923)
++|.+|+||.|.+|++.++|++||.+|.+||+++++++++ +++++|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998875 678999999999988766554434333333333256788
Q ss_pred HHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc
Q 002430 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (923)
Q Consensus 276 ~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 355 (923)
.+++..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.++.. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998764 22
Q ss_pred cCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEEEecC-CcEEEEEcCcHHHH
Q 002430 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (923)
Q Consensus 356 ~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~-g~~~~~~KGa~e~i 434 (923)
.+.+.++++.+++.++....+||+|.|++.++.+....+..++.++++||++.+|+|++++.+.+ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23667788888887765566799999999987665545567888999999999999999887654 77888999999999
Q ss_pred HHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEE
Q 002430 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (923)
Q Consensus 435 l~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~m 514 (923)
+++|++.++.++++++.+++++.+|+|++++|+++ .|++|+|+|+++++||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998776777888899999999999999999973 2678999999999999999999999999999999999
Q ss_pred EccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCC
Q 002430 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (923)
Q Consensus 515 lTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG 594 (923)
+||||+.||.++|+++||.++.+..+.+....+.+.++++++++.+++.++|||++|+||+++|+.||++|++|+|||||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976544333333333344678889999999999999999999999999999999999999999
Q ss_pred ccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 002430 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF 674 (923)
Q Consensus 595 ~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~ 674 (923)
+||+||||+|||||||++|+|+||++||+||++|||++|+.++++||++|+||+||+.|.++.|+..++.+++..+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777777767778
Q ss_pred CCcHHHHHHHHHHhcccccccccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCC
Q 002430 675 DFSPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTR 754 (923)
Q Consensus 675 ~~~~~~il~i~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 754 (923)
+++|+|++|+++++|++.+++++|+++|+++|++|+..+++..+++.|.++++.++.+||+.+...++...++. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999998999999999999999999999999999999999999999888776642222111111 113
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 002430 755 PDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAV 808 (923)
Q Consensus 755 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 808 (923)
..+.+|++|+.+++.+.+++|++|+++.+|.++|++++++++++.+++.++++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 457889999999999999999999999999999999999999998888777754
No 4
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.1e-133 Score=1234.82 Aligned_cols=806 Identities=27% Similarity=0.408 Sum_probs=678.1
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCC
Q 002430 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~ 96 (923)
..+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 3567899999999999999999999999999999999998774 68899999999999999999999999986
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC------CeEEEEeCCCCCCCcEEEEeCCCeeccc
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPAD 170 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD 170 (923)
+|.++++|+++++++..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred eEEEecCCeEEEeccccCCCcceecCCCC-------------cccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-C
Q 002430 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 236 (923)
Q Consensus 171 ~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~ 236 (923)
|+|++|+++.||||+|||||.||.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCcee
Q 002430 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316 (923)
Q Consensus 237 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilv 316 (923)
+++++|+.+++++++++.+.++...+.+++ +.+...+|.+++..++++++++|||+||++++++++.|+.+|+|+|++|
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i-~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLI-NGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 789999999999887654443323222222 2233457888999999999999999999999999999999999999999
Q ss_pred ccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcccc--CcchHHHHHHHhcCCh--hh
Q 002430 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--KE 392 (923)
Q Consensus 317 k~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~ 392 (923)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 99999999999999999999999999999987631 12345567777776655432 3699999999876432 22
Q ss_pred hhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeE
Q 002430 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRS 462 (923)
Q Consensus 393 ~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 462 (923)
....++.++++||+|.+|+|++++.+.++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345688899999999999999998877777889999999999999963 2234567778889999999999
Q ss_pred EEEEeeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC
Q 002430 463 LGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539 (923)
Q Consensus 463 l~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~ 539 (923)
+++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.+||+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998764322 12377999999999999999999999999999999999999999999999999999953 3
Q ss_pred CcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhh
Q 002430 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 619 (923)
Q Consensus 540 ~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~ 619 (923)
.+++|.+.+ .++++++++.+++.+||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 466666554 7889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcHHHHHHHHHHhcccccccccC
Q 002430 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 698 (923)
Q Consensus 620 aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~d~~~~~l~~~ 698 (923)
+||+||++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988887777666666 6999999999999999878999999
Q ss_pred CCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhh
Q 002430 699 RVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFV 776 (923)
Q Consensus 699 ~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 776 (923)
+++++. +|++|+...+...+++.|.+.+++++..|++++.. ++... .......++..|+.+++++.+++|+
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 998874 67888888888888888999888887766654321 11110 0011234566799999999999999
Q ss_pred hccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccch--hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 777 TRSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCG--WGWAGVIWLYSLVTYFPLDILKFGIRY 848 (923)
Q Consensus 777 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~ 848 (923)
+|+++ ++|.+++.+..+++.++.+++..++++..-.+++++.+++ +..|+.+++++.. ++.++.|.+..+
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~ 897 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSR 897 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 99987 5555555555554444444444333311112344566666 3444443333333 567877765433
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.9e-133 Score=1247.48 Aligned_cols=819 Identities=26% Similarity=0.390 Sum_probs=671.2
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCC
Q 002430 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG 92 (923)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~ 92 (923)
|-.|||..+.+|+.+.|+++ .+|||++||++|+++||+|+++.++ .++|+.|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45689999999999999998 5899999999999999999999875 688999999999999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceE
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 172 (923)
+|.++++|++++++|+.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEeccccCCCcceecCCC---------------CcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-
Q 002430 173 LLEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 236 (923)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~- 236 (923)
|++++++.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|++|||++++++.+
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998999999999999999999642 57899999999999999999999999999999886431
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHH
Q 002430 237 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281 (923)
Q Consensus 237 -----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (923)
.++|+|+.++++++++.++.+++.++.++..+ . ..+...+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~--~-~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK--F-DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--h-hhhHHHHHH
Confidence 13899999999998755443332222222111 1 112466778
Q ss_pred HHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeee---c----
Q 002430 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEV---F---- 354 (923)
Q Consensus 282 ~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~---~---- 354 (923)
+++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+++... +
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 899999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred -ccCC-----------------------------------------C-------hHHHHHHHHHHccc------------
Q 002430 355 -AKGV-----------------------------------------E-------KEHVILLAARASRT------------ 373 (923)
Q Consensus 355 -~~~~-----------------------------------------~-------~~~~l~~a~~~~~~------------ 373 (923)
..++ . ..+++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 0000 0 01244444444321
Q ss_pred cCcchHHHHHHHhcCCh----------hhh-------------------hcCceeEEeecCCCCCcceEEEEEecCC-cE
Q 002430 374 ENQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NW 423 (923)
Q Consensus 374 ~~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~~F~s~~k~~sv~~~~~~g-~~ 423 (923)
..+||+|.|++.++... .+. ...|++++.+||+|.+|||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12599999998775210 111 2347889999999999999999987654 47
Q ss_pred EEEEcCcHHHHHHhccC------------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC------------CCCCC
Q 002430 424 HRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPG 479 (923)
Q Consensus 424 ~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~------------~~~~e 479 (923)
++++|||||.|+++|+. +++.++.+.+.+++|+++|+|||++|||.+++.+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 89999999999999963 2344677888999999999999999999886432 23468
Q ss_pred CCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC--------CCCcccCccccccc
Q 002430 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSSLLGQDKDASI 551 (923)
Q Consensus 480 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--------~~~~l~~~~~~~~~ 551 (923)
++|+|+|+++++||||+|++++|++||++||+|+|+||||+.||.+||+++||.++.. ...+++|.+.+ .+
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-AL 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hc
Confidence 8999999999999999999999999999999999999999999999999999964310 12355565443 67
Q ss_pred CcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCc
Q 002430 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 630 (923)
Q Consensus 552 ~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~ 630 (923)
+++++++++++..||||++|+||.++|+.+|++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 788899999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCCcHHHHHHHHHHhccc-ccccccCCCCCC
Q 002430 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS 703 (923)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~------~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~ 703 (923)
++|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++||+|+|++|+|+++|.+ ++++++|++++.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999998877776655542 3689999999999999965 799999987654
Q ss_pred -----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--------ccCccccCCCHHHHHHHHHHHHHH
Q 002430 704 -----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD--------AFGVRSLRTRPDEMMAALYLQVSI 768 (923)
Q Consensus 704 -----~~p--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~t~~f~~~~~ 768 (923)
|++ ++...++++...+++|+++++.+++.|++.+.. +..+ .++.+ . ....+.+|+.|.++++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAG-C-NDVFKARSAAFATMTF 948 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccc-c-cchhhhHHHHHHHHHH
Confidence 222 122234566667788999999888776654321 1000 01100 0 1234678999999999
Q ss_pred HHHHHhhhhccCCCCccc------------------chhHHHHHHHHHHHHHHHHHHHhhc-c--cccccccchhhHHHH
Q 002430 769 ISQALIFVTRSRSWSFIE------------------RPGLLLATAFVIAQLVATFIAVYAN-W--SFARIEGCGWGWAGV 827 (923)
Q Consensus 769 ~~~~~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 827 (923)
++.+++|++|+.+.+.+. ..+.+++++++++.++.. +.+|.+ . .++++.+++|.|++
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~-~~~~~p~~~~~~f~~~~l~~~w~~- 1026 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAF-PTIYIPVINDDVFKHKPIGAEWGL- 1026 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHH-HHHhhhhhhhhhhccCCcchHHHH-
Confidence 999999999997632111 134467777776666543 334543 2 25567777786655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 002430 828 IWLYSLVTYFPLDILKFGIRYI 849 (923)
Q Consensus 828 ~~~~~~~~~~~~~~~K~~~~~~ 849 (923)
+++++++.++..+++|+++|++
T Consensus 1027 ~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1027 AAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 5778888899999999887655
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=5.1e-133 Score=1231.14 Aligned_cols=814 Identities=26% Similarity=0.411 Sum_probs=677.6
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcC----C
Q 002430 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG----G 92 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~----~ 92 (923)
..|..+.+++++.|+++.+|||++||++|+++||+|++++++ .++|+.|++||++|+.++|+++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 457889999999999999999999999999999999999776 56889999999999999999999999997521 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC------CeEEEEeCCCCCCCcEEEEeCCCe
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDI 166 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiV~l~~Gd~ 166 (923)
+...+|.++++|++++++++.++++||++++++.++|+++.+++++|+|| |++++|+++||||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 22358999999999999999999999999999999999999999999999 489999999999999999999999
Q ss_pred eccceEEEecCCeEEEeccccCCCcceecCC-----------------------CCcccccceeecCeEEEEEEEecchh
Q 002430 167 VPADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVHT 223 (923)
Q Consensus 167 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T 223 (923)
|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|++.++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999889999999999999999975 26899999999999999999999999
Q ss_pred hHHhHHhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHH
Q 002430 224 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303 (923)
Q Consensus 224 ~~g~i~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~ 303 (923)
++||+++++.+.+.++++|+.++++++++..+..+++.+.+++ ......+|.+++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~-~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI-NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 9999999998766778999999998876543332222221122 222345788899999999999999999999999999
Q ss_pred HHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccc--cCcchHHH
Q 002430 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDA 381 (923)
Q Consensus 304 ~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ 381 (923)
.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ..+||+|.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 999999999999999999999999999999999999999999988652 2234456677776654332 23599999
Q ss_pred HHHHhcCCh--hhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC----------ChhHHHHHH
Q 002430 382 AIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVH 449 (923)
Q Consensus 382 ai~~~~~~~--~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~ 449 (923)
|++.++... ......++.++++||++.+|+|++++++.+|+++.++|||||.++++|+. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 999887432 12234678899999999999999999877788899999999999999963 233456778
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCC-----CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTK-----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 524 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~-----~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~ 524 (923)
+.+++++.+|+|++++||++++..+. +..|++++|+|+++|+||||||++++|++||++||+|+|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 88899999999999999998765321 2357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcC
Q 002430 525 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (923)
Q Consensus 525 ~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~A 604 (923)
+||+++||.. ..+++|.+.+ .++++++.+.+++.+||||++|+||+++|+.||++|++|+|||||+||+||||+|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 3456666554 7889999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcHHHHHH
Q 002430 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLI 683 (923)
Q Consensus 605 dVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~-~~~~~~~il~ 683 (923)
|||||||+|||+||++||+||++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++|
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~ 736 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLL 736 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987776666555555 7899999999
Q ss_pred HHHHhcccccccccCCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHH
Q 002430 684 IAILNDGTIMTISKDRVKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAA 761 (923)
Q Consensus 684 i~l~~d~~~~~l~~~~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 761 (923)
+|+++|.+.+++++|+++++. +|++|+.+.+-..++..|.+.+++++..|++.+.. + . .+. . ......+|.
T Consensus 737 ~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~--~~~--~-~~~~~~~t~ 809 (903)
T PRK15122 737 QNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV-F-A--ANS--V-EMQALFQSG 809 (903)
T ss_pred HHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-h-c--cCc--H-hhhhhhHHH
Confidence 999999888999999998764 67777766555555567777777776655543211 0 0 010 0 001134578
Q ss_pred HHHHHHHHHHHHhhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHH-hhcccccccccchhhHHHHHHHHHHHHHHHH
Q 002430 762 LYLQVSIISQALIFVTRSRS-WSFIERPGLLLATAFVIAQLVATFIAV-YANWSFARIEGCGWGWAGVIWLYSLVTYFPL 839 (923)
Q Consensus 762 ~f~~~~~~~~~~~~~~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (923)
.|+.+++++.+++|++|+++ ++|.+++.+..+++.++.+++.+++++ .. -.++.+.++++..|++++.++++++++.
T Consensus 810 ~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 888 (903)
T PRK15122 810 WFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPL-GAMVGLEPLPWSYFPWLAATLLGYCLVA 888 (903)
T ss_pred HHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987 444444434434433333333333322 01 1234577778887777788888888888
Q ss_pred HHHHHHHHH
Q 002430 840 DILKFGIRY 848 (923)
Q Consensus 840 ~~~K~~~~~ 848 (923)
++.|.+.++
T Consensus 889 e~~k~~~~r 897 (903)
T PRK15122 889 QGMKRFYIR 897 (903)
T ss_pred HHHHHHHhh
Confidence 988855443
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-134 Score=1239.18 Aligned_cols=780 Identities=32% Similarity=0.508 Sum_probs=662.1
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhc
Q 002430 15 ESVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALAN 90 (923)
Q Consensus 15 ~~~~~~~~~~~--~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~ 90 (923)
....||..+.+ ++...+.++ .+|||++|+.+|+++||+|++++.+ .+.|.+|+.||++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 35578888888 999999887 6799999999999999999999665 688999999999999999999999999987
Q ss_pred CCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCe
Q 002430 91 GGGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDI 166 (923)
Q Consensus 91 ~~~~~~~~----~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~ 166 (923)
.| .++..|+.++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceEEEecCCeEEEeccccCCCcceecCC--------------CCcccccceeecCeEEEEEEEecchhhHHhHHhhh
Q 002430 167 VPADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232 (923)
Q Consensus 167 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~ 232 (923)
||||++|+++++++||||+|||||+||.|.+ .|++|+||.+.+|++.++|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhc
Q 002430 233 DST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (923)
Q Consensus 233 ~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~ 311 (923)
... ...+++|+.+++++.+++.+.+++.++.++..++..+..|.+.+..++++++++||++||+++++++++|+++|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 6899999999999988766555544444444433323448899999999999999999999999999999999999
Q ss_pred CCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCC------h---HHHHHHHHHHcc-cc-------
Q 002430 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------K---EHVILLAARASR-TE------- 374 (923)
Q Consensus 312 ~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~---~~~l~~a~~~~~-~~------- 374 (923)
+++++|+++++|+||++++||||||||||+|+|+|.+++........+ . ..++..++.|+. ..
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999998752011111 1 123444444442 22
Q ss_pred CcchHHHHHHHhcC------ChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC-------C
Q 002430 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------R 441 (923)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 441 (923)
.+||+|.|++..+. +.......+++++++||+|+||||++++++.+|++++++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 46999999998874 3444566678899999999999999999977788999999999999999973 4
Q ss_pred hhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC----CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEcc
Q 002430 442 EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 517 (923)
Q Consensus 442 ~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~----~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTG 517 (923)
++.++.+++..++|+++|||++++|||..+..+. +..|++|+|+|+++|+||||+|++++|+.|++|||+|||+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5667899999999999999999999998765543 578999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccC
Q 002430 518 DQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVND 597 (923)
Q Consensus 518 D~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~ND 597 (923)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||+||+||.+||+.||++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999987653322355666554 677889999999999999999999999999999999999999999999
Q ss_pred hHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-C
Q 002430 598 APALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IWK-F 674 (923)
Q Consensus 598 apaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~-~~~-~ 674 (923)
|||||+|||||||+ +|+|+||+|||+++++|+|++|+.+|+|||++|+|++|++.|.+++|+..++.++++.+ ..+ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999997 89999999999999999999999999999999999999999999999987766666544 344 6
Q ss_pred CCcHHHHHHHHHHhccc-ccccccCCCC-----CC-CCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 002430 675 DFSPFMVLIIAILNDGT-IMTISKDRVK-----PS-PQPDS--WKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDA 745 (923)
Q Consensus 675 ~~~~~~il~i~l~~d~~-~~~l~~~~~~-----~~-~~p~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 745 (923)
||+|+|++|+|+++|++ +++++.++++ ++ ++|.+ |+.+.++.+.+..|...++++++.|.+.+.... ...
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~-~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI-ANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 89999999999999986 6788776532 22 23555 666666666777788888888777666553211 111
Q ss_pred cCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHH
Q 002430 746 FGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIER---PGLLLATAFVIAQLVATFI 806 (923)
Q Consensus 746 ~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~ 806 (923)
.+... .....+++.|+.+++++.++.+..|+.+.+|++. +++.+++++++..++..+.
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~ 870 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLI 870 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHH
Confidence 11100 1556789999999999999999999987555443 4556666666555554444
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=5.3e-132 Score=1221.35 Aligned_cols=807 Identities=25% Similarity=0.390 Sum_probs=671.5
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCC
Q 002430 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (923)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~ 96 (923)
+.|+.+.+++++.|+++.+|||++||++|+++||+|++++++ .++|+.|+++|++|++++++++++++++++
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 456889999999999999999999999999999999998876 568899999999999999999999999986
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe------CCeEEEEeCCCCCCCcEEEEeCCCeeccc
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPAD 170 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R------dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD 170 (923)
+|.++++|++++++++.++++||+|++++.++|+++.+++++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred eEEEecCCeEEEeccccCCCcceecCCCC-------------cccccceeecCeEEEEEEEecchhhHHhHHhhhhccCC
Q 002430 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237 (923)
Q Consensus 171 ~~ll~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~ 237 (923)
|+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+||+++++++.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999988999999999999999998874 69999999999999999999999999999999988667
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceec
Q 002430 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (923)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (923)
++++|+.++++++++..+.++...+.++ .+.+...+|.+++..++++++++|||+||++++++++.|+++|+|+|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 7899999999998865544432322222 222334578889999999999999999999999999999999999999999
Q ss_pred cCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcccc--CcchHHHHHHHhcCCh--hhh
Q 002430 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE--NQDAIDAAIVGMLADP--KEA 393 (923)
Q Consensus 318 ~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~ 393 (923)
+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++..++.++... .+||+|.|++.++.+. ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 9999999999999999999999999999988642 22345566777776554422 3599999999877532 223
Q ss_pred hcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeEE
Q 002430 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (923)
Q Consensus 394 ~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l 463 (923)
...++.++.+||+|.+|+|++++++.++.+++++||+||.++++|+. +++.++++++.+++++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45678899999999999999998766666789999999999999963 23445678888999999999999
Q ss_pred EEEeeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC
Q 002430 464 GVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (923)
Q Consensus 464 ~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~ 540 (923)
++||++++..+. +..|++|+|+|+++++||||||++++|++||++||+|+|+||||+.||.+||+++||.+ ..
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----ND 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CC
Confidence 999998765432 12478899999999999999999999999999999999999999999999999999963 24
Q ss_pred cccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhc
Q 002430 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (923)
Q Consensus 541 ~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~a 620 (923)
.++|.+.+ .++++++.+.+++.++|||++|+||+++|+.||++|++|+|||||+||+||||+||||||||+|+|+||++
T Consensus 559 v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred eeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 56665543 67888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcHHHHHHHHHHhcccccccccCC
Q 002430 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWK-FDFSPFMVLIIAILNDGTIMTISKDR 699 (923)
Q Consensus 621 ADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~-~~~~~~~il~i~l~~d~~~~~l~~~~ 699 (923)
||+||++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++|+|+++|.+++++++|+
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~ 717 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDK 717 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999988777766665555 79999999999999997789999999
Q ss_pred CCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 002430 700 VKPSP--QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVT 777 (923)
Q Consensus 700 ~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~ 777 (923)
++++. +|++|+.+.+...+++.|++.+++++..|++.+.... .... ......++..|+.+++++.+++|++
T Consensus 718 ~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~t~~f~~~~~~~~~~~~~~ 790 (867)
T TIGR01524 718 MDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------ANTV-EEQALFQSGWFVVGLLSQTLVVHMI 790 (867)
T ss_pred CChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccch-hhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 98873 5666877777777788899888777766655432110 0000 0122356888999999999999999
Q ss_pred ccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhH--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 002430 778 RSRS-WSFIERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGW--AGVIWLYSLVTYFPLDILKFGIRYI 849 (923)
Q Consensus 778 r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~K~~~~~~ 849 (923)
|+++ ++|.+++.+..+++.++.+++.++++..+-..++.+.++++.| |+.++++++ .++.++.|.+..+.
T Consensus 791 R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~--~~~~e~~k~~~~~~ 863 (867)
T TIGR01524 791 RTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY--MATMQLVKTFYIRR 863 (867)
T ss_pred CcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHH--HHHHHHHHHHHHHh
Confidence 9987 4444434333333333333332222211001233455443332 333333333 36678888664443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=5.7e-128 Score=1202.55 Aligned_cols=831 Identities=23% Similarity=0.367 Sum_probs=677.3
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHhcC-
Q 002430 15 ESVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG- 91 (923)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~- 91 (923)
...|||..+.+++++.|+++ .+|||++||++|+++||+|+++.++ .+.|+.|+++|++|++++++++++++++....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 37789999999999999998 6799999999999999999998755 67889999999999999999999998875321
Q ss_pred -----CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCe
Q 002430 92 -----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDI 166 (923)
Q Consensus 92 -----~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~ 166 (923)
.....+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 112347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccceEEEecCCeEEEeccccCCCcceecCCCC----------cccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-
Q 002430 167 VPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (923)
Q Consensus 167 IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~- 235 (923)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+|++++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999977999999999999999998864 699999999999999999999999999999998776
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCce
Q 002430 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (923)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~il 315 (923)
.+++++++.++++++++..+++++.++.+ +.+...+.+|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 46799999999998876554433222222 22233456788888999999999999999999999999999999999999
Q ss_pred eccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc---cC--------CCh-----HHHHHHHHHHccc------
Q 002430 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG--------VEK-----EHVILLAARASRT------ 373 (923)
Q Consensus 316 vk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~--------~~~-----~~~l~~a~~~~~~------ 373 (923)
+|+++++|+||++++||||||||||+|+|+|.++++.... .+ .+. +.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 9999999999999999999999999999999988642110 00 111 2345555554321
Q ss_pred ---------cCcchHHHHHHHhcC----ChhhhhcCceeEEeecCCCCCcceEEEEEec---CCcEEEEEcCcHHHHHHh
Q 002430 374 ---------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKGAPEQILAL 437 (923)
Q Consensus 374 ---------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~---~g~~~~~~KGa~e~il~~ 437 (923)
..+||+|.|++.++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999998753 3445567789999999999999999887632 246789999999999999
Q ss_pred ccC----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCceEEEEeccCCCCCc
Q 002430 438 CNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQLVGLLPLFDPPRH 496 (923)
Q Consensus 438 ~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-----------~~~e~~l~llG~i~i~D~lr~ 496 (923)
|+. +++.++.+.+.+++++++|+||+++||+.+++++. +..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 962 23456778889999999999999999998864321 123789999999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcccCcccccccCcc
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSLLGQDKDASIAAL 554 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~~~~~~~~~ 554 (923)
|++++|++|+++||+|+|+|||++.||.++|+++|+.++... ..+++|.+. +.++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l-~~l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDL-KDMTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHh-hhCCHH
Confidence 999999999999999999999999999999999999643210 124445444 356778
Q ss_pred hHHHHhhhcC--eEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCch
Q 002430 555 PVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 631 (923)
Q Consensus 555 ~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~ 631 (923)
++++.+++.+ ||||++|+||++||+.+|++|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|+||||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8889888765 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---CCC
Q 002430 632 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQP 706 (923)
Q Consensus 632 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~-~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~p 706 (923)
+|+.++++||++|+|+++++.|.++.|+..++..+++.++ .+.|++|+|++|+|+++|.+ ++++++|++++. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999877766665544 55689999999999999985 799999887654 123
Q ss_pred Cchh-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHh-cccccc-ccCc---------cccCCC-------------HH
Q 002430 707 DSWK-----LKE-IFATGVVLGSYLAIMTVVFFWLMRK-TDFFSD-AFGV---------RSLRTR-------------PD 756 (923)
Q Consensus 707 ~~~~-----~~~-~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~~ 756 (923)
.+++ .+. ++.+.+..|+++++..++.|++.+. .+|... .++. .+..+. ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 3221 122 3334456688999888876665442 122110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCC-c-ccchhHHHHHHHHHHHHHHHHHHHhhc--ccccccccchhhHHHHHHHHH
Q 002430 757 EMMAALYLQVSIISQALIFVTRSRSWS-F-IERPGLLLATAFVIAQLVATFIAVYAN--WSFARIEGCGWGWAGVIWLYS 832 (923)
Q Consensus 757 ~~~t~~f~~~~~~~~~~~~~~r~~~~~-~-~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 832 (923)
+.+|++|..+++++.++++++|+.+.+ | ...++++++.++++.+++..++ .|.+ ..++++.++++.+|+.+++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 468999999999999999999997643 2 2234556666666665554443 3432 234567778888888888888
Q ss_pred HHHHHHHHHHHHHHHH
Q 002430 833 LVTYFPLDILKFGIRY 848 (923)
Q Consensus 833 ~~~~~~~~~~K~~~~~ 848 (923)
++.++..++.|+++|+
T Consensus 970 ~~~~~~~~~~k~~~r~ 985 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRR 985 (997)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888889999988765
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.1e-126 Score=1178.97 Aligned_cols=800 Identities=27% Similarity=0.398 Sum_probs=672.7
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-ccHHHHHHHHh-hchHHHHHHHHHHHHHHHhcCC
Q 002430 17 VDLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGG 92 (923)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~GLs-~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~-~~~~~~~l~~~ail~~~l~~~~ 92 (923)
-+||.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 369999999999999998 56999 99999999999999999765 67899999999 9999999999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceE
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ 172 (923)
+|.+++.|++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEeccccCCCcceecCCCC--------------cccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CC
Q 002430 173 LLEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 237 (923)
Q Consensus 173 ll~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~ 237 (923)
|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999977999999999999999999863 799999999999999999999999999999999876 46
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceec
Q 002430 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (923)
Q Consensus 238 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (923)
++++|+.++++++++..+.++.+++.+++.| +.+.++.+.+..++++++++|||+||++++++++.++++|+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 8999999999998765443332222223333 345678889999999999999999999999999999999999999999
Q ss_pred cCchhhhccCceEEEecCCCccccCcceeeeeeeeec-c---cC--C-------------------ChHHHHHHHHHHcc
Q 002430 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF-A---KG--V-------------------EKEHVILLAARASR 372 (923)
Q Consensus 318 ~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~-~---~~--~-------------------~~~~~l~~a~~~~~ 372 (923)
+++++|+||++|+||||||||||+|+|+|.+++.... . .+ + ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999998764210 0 00 0 01234555544433
Q ss_pred c--------cCcchHHHHHHHhcCC--hhhhhcCceeEEeecCCCCCcceEEEEEec-CCcEEEEEcCcHHHHHHhccC-
Q 002430 373 T--------ENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC- 440 (923)
Q Consensus 373 ~--------~~~~~~~~ai~~~~~~--~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~- 440 (923)
. ..+||+|.|++.++.. .+..+..++.++++||+|.+|||+++++.. +++++.++|||||.|+.+|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 1247999999987642 223345688899999999999999988753 567899999999999999963
Q ss_pred ----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC
Q 002430 441 ----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV 510 (923)
Q Consensus 441 ----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI 510 (923)
+++.++.+++.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++||++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 133456778889999999999999999975 45799999999999999999999999999999
Q ss_pred EEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEE
Q 002430 511 NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (923)
Q Consensus 511 ~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m 590 (923)
+++|+|||++.||.++|+++||..+. ...++|.+. +.++++++++.+++..||||++|+||.++|+.+|++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l-~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKL-DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHh-HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999997542 334555544 367888999999999999999999999999999999999999
Q ss_pred EcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002430 591 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI- 668 (923)
Q Consensus 591 ~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~- 668 (923)
||||+||+||||+|||||||| +|+|+|+++||++|++|||++|+.++++||++|+|+++++.|.++.|+..++.+++.
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999998 799999999999999999999999999999999999999999999999776655443
Q ss_pred HHhhcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---CCCCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002430 669 ALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSW----KLKEIFATGVVLGSYLAIMTVVFFWLMRKTD 740 (923)
Q Consensus 669 ~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~p~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 740 (923)
.+..+.|++|+|++|+|+++|++ ++++++|++++. ++|+++ ..+..+...++.|+++++++++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 34467899999999999999987 589999887654 123322 234556667788988888877666543311
Q ss_pred ccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--cccc
Q 002430 741 FFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVYAN--WSFA 815 (923)
Q Consensus 741 ~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~ 815 (923)
+ ....+.+|++|..+++++.++.|++|+.+.+++. ..+.++++++++..++..++ +|.+ -.++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f 849 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVF 849 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1 0234567999999999999999999997654332 23446666666665554333 4432 2344
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 816 RIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRY 848 (923)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~ 848 (923)
.+.+++|..|+.+++++++.+++.++.|+++|.
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567788888888888999999999999988764
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=4.2e-126 Score=1183.04 Aligned_cols=814 Identities=22% Similarity=0.341 Sum_probs=665.2
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-cHHHHHHHHhhchHHHHHHHHHHHHHHHhc------CC
Q 002430 23 PIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALAN------GG 92 (923)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs--~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~------~~ 92 (923)
..+++++.|+++ ++||| ++||++|+++||+|+++.++. ++|+.|+++|++|++++|+++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999998 66999 999999999999999998865 778999999999999999999999999762 12
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccce
Q 002430 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADA 171 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~ 171 (923)
++..+|.++++|+++++++.++++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEeccccCCCcceecCCCCc--ccccceeecCeEEEEEEEecchhhHHhHHhhhhccCCCCcHHHHHHHHH
Q 002430 172 RLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249 (923)
Q Consensus 172 ~ll~g~~~~Vdes~LTGEs~pv~K~~~~~--v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~~~i~ 249 (923)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|++.++|++||.+|.+||++++++.+++++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998765 9999999999999999999999999999999987767789999999988
Q ss_pred HHHHHHHHHHHHHHHHH---HHhcc---c---------cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 250 NFCICSIAVGIVAEIII---MYPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 250 ~~~~~~i~~~~~~~~~~---~~~~~---~---------~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
+++...+++..++.+++ .|... . .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 77543332222211111 11111 1 246677888999999999999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc---cC----CC--hHHHHHHH-HHHcccc----------
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----VE--KEHVILLA-ARASRTE---------- 374 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~~----~~--~~~~l~~a-~~~~~~~---------- 374 (923)
++|+++++|+||++++||||||||||+|+|+|.+++..... .+ .+ ..+++..+ .+++...
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999987653210 00 00 12223322 3322211
Q ss_pred -CcchHHHHHHHhcC----ChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCC--------
Q 002430 375 -NQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-------- 441 (923)
Q Consensus 375 -~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 441 (923)
.+||+|.|++.++. +..+.+..++.++.+||+|.+|||+++++..++++++++|||||.++++|+.-
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 25899999998763 33344556778889999999999999998767778999999999999999631
Q ss_pred --hhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC---CCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEc
Q 002430 442 --EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516 (923)
Q Consensus 442 --~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlT 516 (923)
.+.++.+++.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++||++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0135678888999999999999999998864332 23478999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCcc
Q 002430 517 GDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVN 596 (923)
Q Consensus 517 GD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~N 596 (923)
|||+.||.+||++|||.++. ..+++|.+.+ .++++++++++++.+||||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997531 2455565543 67788999999999999999999999999999999999999999999
Q ss_pred ChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 002430 597 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKF 674 (923)
Q Consensus 597 DapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~-~~~~~~ 674 (923)
|+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|+++++.|.+++|+..++..++. .+..+.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766655544 444677
Q ss_pred CCcHHHHHHHHHHhccc-ccccccCCCCCC---CCCCchh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002430 675 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQPDSWK----LKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAF 746 (923)
Q Consensus 675 ~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~p~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 746 (923)
|++|+|++|+|+++|.+ ++++++|++.+. .+|.+|+ .+..+...+..|+++++++++.|++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 799999887654 2333332 3456666778899988888876665432 1100 0
Q ss_pred Cccc-cCCCHHHHHHHHHHHHHHHHHHHhhhhccCCC--Cc---ccchhHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 002430 747 GVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSW--SF---IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGC 820 (923)
Q Consensus 747 g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~--~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (923)
+... ........+|+.|.++++++.++.+++|+.+. +| +.|+ +++.++++..++..++..++ ..++++.++
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~--~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l 913 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNR--IFVTIMGFTFGFQVIIVEFG-GSFFSTVSL 913 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccH--HHHHHHHHHHHHHHHHHHHH-HHHhcccCC
Confidence 1000 00123457899999999999999999998653 22 3343 55555555555554443333 234466777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q 002430 821 GWGWAGVIWLYSLVTYFPLDILKFG 845 (923)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (923)
+|..|+.+++++++.+++.++.|++
T Consensus 914 ~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 914 SIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888888888888888888875
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-127 Score=1078.72 Aligned_cols=813 Identities=23% Similarity=0.339 Sum_probs=643.8
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccc-cHHHHHHHHhhchHHHHHHHHHHHHHHHhcC-CCCCCc
Q 002430 23 PIEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANG-GGRDPD 97 (923)
Q Consensus 23 ~~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~-~~~~~~ 97 (923)
-.+.+.+.|+++ ..||+. +|..+|++.||.|.+|++++ ++|...++.|.+.-..+|.++|++|+.++.. .+.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 378899999998 679987 89999999999999999885 5666678999999999999999999999873 344679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEec
Q 002430 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (923)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~-~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 176 (923)
|++++.|++.+++..++....+|+.++....|.+ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998876655555555555555555555543 335578999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCC--CCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHH
Q 002430 177 DPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCI 253 (923)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~--~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~ 253 (923)
+++.||||++||||.++.|.+ ..++++||++.+|.+.++|+++|.+|..|++..++.... +++|+|-.+++++..+.
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 457999999999999999999999999999999998875 88999999888765421
Q ss_pred ---HHHHHHHHHHHHHHHhcc-----cc---ch--------HHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 254 ---CSIAVGIVAEIIIMYPVQ-----HR---KY--------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 254 ---~~i~~~~~~~~~~~~~~~-----~~---~~--------~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
..++...++.++..|+.. +. .+ .+.+..++.++++++|+|||+++++++++++++|.++++
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 112221222223333321 11 11 122333455677899999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccC--------CChH--HHHHHH-HHHccc----------
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG--------VEKE--HVILLA-ARASRT---------- 373 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~--~~l~~a-~~~~~~---------- 373 (923)
+||+++|+|+||+.++||+|||||||.|+|+|.+.++....+. .++. +++..+ +.++..
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999876432211 1111 112111 111110
Q ss_pred ---cCcchHHHHHHHhc----CChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC------
Q 002430 374 ---ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 440 (923)
Q Consensus 374 ---~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 440 (923)
..++|++.|++++. .|.++.+...+.++++||+|.+|+|+++++.++|..+.++|||.|.|+++|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 12479999998865 46777888889999999999999999999988777349999999999999974
Q ss_pred -----ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCC-------C-CCCCCCCceEEEEeccCCCCCccHHHHHHHHHh
Q 002430 441 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 507 (923)
Q Consensus 441 -----~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~-------~-~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~ 507 (923)
+++.++.+++.++.||++|+|++|+||++..+. + .+..+.+|+++|+++|+||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566889999999999999999999984322 1 245788999999999999999999999999999
Q ss_pred CCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCE
Q 002430 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 587 (923)
Q Consensus 508 aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~ 587 (923)
|||+|.|+||||..||++||.+|||.++..+-..+.|.+. ..+++++.++++++.+|+||.+|.||+.+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eF-r~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEF-RELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhh-hhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 9999999999999999999999999876443344555544 488999999999999999999999999999999999999
Q ss_pred EEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 002430 588 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR-IVLGF 665 (923)
Q Consensus 588 V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~-~~~~~ 665 (923)
||+||||.||+||||+||||.||| .|||+|||+|||||+||||++|+.+++|||..|+||+||++|+++.|+. +++.+
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999984 44555
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---C----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 666 MLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---P----QPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMR 737 (923)
Q Consensus 666 ~~~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~----~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 737 (923)
..+...-..|++++|+||+|+++|.+ ++++++|++.+. + +..+...+..|...+.+.+|+.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 55555566899999999999999977 799999987653 1 233445566777888899999888876554433
Q ss_pred hccccccccCcc-ccCCCHHHHHHHHHHHHHHHHHHHhhhhccCC---CC--cccchhHHHHHHHHHHHHHHHHHHHhhc
Q 002430 738 KTDFFSDAFGVR-SLRTRPDEMMAALYLQVSIISQALIFVTRSRS---WS--FIERPGLLLATAFVIAQLVATFIAVYAN 811 (923)
Q Consensus 738 ~~~~~~~~~g~~-~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~---~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 811 (923)
. . |+.. ..+....+..|++|.+++++|.++-++.|+-. .| .++|+ ++++++...++..++.+..-
T Consensus 901 ~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviIveF~ 971 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVIIVEFG 971 (1034)
T ss_pred h--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhhhhhc
Confidence 1 1 2211 11112445569999999999999999999855 11 22333 23333333333333333322
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002430 812 WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (923)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (923)
..++...+++|.-|++++.+.++.+..-.+.|.+
T Consensus 972 g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 972 GAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred CcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 3445677888887777777666655555544433
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.7e-117 Score=1098.62 Aligned_cols=779 Identities=27% Similarity=0.367 Sum_probs=625.5
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHhcC---CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Q 002430 66 FLGFMWNPLSWVMEAAAIMAIALANG---GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (923)
Q Consensus 66 ~l~~~~~~~~~~l~~~ail~~~l~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd 142 (923)
+++||++|++++|+++++++++++.. .....+|.++++|++++++++.++++||+|+++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999998632 222358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC-------------Ccccccceeec
Q 002430 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (923)
Q Consensus 143 g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~~Gt~v~~ 209 (923)
|++++|+++||||||+|.|++||.|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997899999999999999999875 78999999999
Q ss_pred CeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c----ccch----HHHH
Q 002430 210 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-Q----HRKY----RDGI 279 (923)
Q Consensus 210 G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~----~~~~----~~~~ 279 (923)
|++.++|++||.+|++||++++++.. .+++++|+.+++++.++..++++.+++.+++.+.. . ..+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 47899999999998876543333222222221111 1 1122 2344
Q ss_pred HHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeec-----
Q 002430 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (923)
Q Consensus 280 ~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~----- 354 (923)
..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 466788999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHHccc------------cCcchHHHHHHHhcCCh----h--
Q 002430 355 ------AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADP----K-- 391 (923)
Q Consensus 355 ------~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~----~-- 391 (923)
..+++ .+.++..++.|+.. ..+||.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00010 12234444444431 12599999998765211 0
Q ss_pred --------------hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC-----------ChhHHH
Q 002430 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (923)
Q Consensus 392 --------------~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 446 (923)
..+..++.++.+||+|.+|||++++++ ++++.+++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124567789999999999999999875 467899999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEeeecCCCC----------CCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEE
Q 002430 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (923)
Q Consensus 447 ~~~~~i~~~a~-~GlR~l~~A~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~ml 515 (923)
++.+++++|++ +|+||+++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986432 24468899999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHHHhCCCCCCCC--CCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcC
Q 002430 516 TGDQLAIGKETGRRLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (923)
Q Consensus 516 TGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GD 593 (923)
|||+..||.++|+++|+..+..+ ...++|.+. +.+++++..+.+.+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 123444443 356677788888888999999999999999999999999999999
Q ss_pred CccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002430 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL-IW 672 (923)
Q Consensus 594 G~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~-~~ 672 (923)
|+||+||||+||||||||+|+++|+++||+++.+|||++|+.++++||++|+|+++++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987776666543 45
Q ss_pred cCCCcHHHHHHHHHHhccc-ccccccCCCCCCC---CCC----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 002430 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPSP---QPD----SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKT-DFFS 743 (923)
Q Consensus 673 ~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~~---~p~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 743 (923)
+.||+|+|++|+|+++|.+ +++++.+++++.. +|+ +...++.+..+++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999965 6889988876541 121 22234566677788999998877666554321 2211
Q ss_pred c--cc--Cccc---c----CCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHh
Q 002430 744 D--AF--GVRS---L----RTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE---RPGLLLATAFVIAQLVATFIAVY 809 (923)
Q Consensus 744 ~--~~--g~~~---~----~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 809 (923)
. .. +..+ . .....+.+|+.|.++++++.++.|++|+.+.+++. ..+.++++++++..++..++ .|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~-~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLI-LY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHH-HH
Confidence 0 00 0000 0 00134567999999999999999999997644322 12346666666555554333 44
Q ss_pred hc--ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 810 AN--WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIR 847 (923)
Q Consensus 810 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~ 847 (923)
.+ -.++++.+++|..|+++++++++.++..++.|+++|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 234567788899898889999999999999998753
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-120 Score=1026.19 Aligned_cols=845 Identities=24% Similarity=0.405 Sum_probs=698.0
Q ss_pred ccccchHHhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHH
Q 002430 4 DKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEA 80 (923)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~ 80 (923)
.+..+++++++| .+|.|++|.+|+.++++++ .+|||.+++.+++.+-|+|.+++++ .+.|.+|++|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 345578899999 9999999999999999998 7899999999999999999998877 567999999999999999999
Q ss_pred HHHHHHHHhc-----CCCC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCC
Q 002430 81 AAIMAIALAN-----GGGR-DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 154 (923)
Q Consensus 81 ~ail~~~l~~-----~~~~-~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv 154 (923)
+++++++... ...+ ....+-+.++..++++..+..|+||.+..+.+++.+++.|+.+.|+|||+...+.++|||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 9999997431 1111 122333445556677888899999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC----------CcccccceeecCeEEEEEEEecchhh
Q 002430 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHTF 224 (923)
Q Consensus 155 ~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~~Gt~v~~G~~~~~V~~tG~~T~ 224 (923)
|||+|.++-||+||||.|++++..+++|+|+|||||.|..+++. |+.|.+|.+.+|.+.++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 99999999999999999999999999999999999999999773 67899999999999999999999999
Q ss_pred HHhHHhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHH
Q 002430 225 FGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303 (923)
Q Consensus 225 ~g~i~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~ 303 (923)
+|+|+.+... ...++++++.++++..+.....++ +.++++......++.|.+++.+++.++++.+|++|+..+++.++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999998766 467889999998887664332222 22222222223477888998889999999999999999999999
Q ss_pred HHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeeccc----------------CCChHHHHHHH
Q 002430 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----------------GVEKEHVILLA 367 (923)
Q Consensus 304 ~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~----------------~~~~~~~l~~a 367 (923)
.-++||+++++++|++.++|+||+.++||+|||||||+|.|+|.+.+.+..-. ...-.++++.+
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877531100 01112455555
Q ss_pred HHHccc---------------cCcchHHHHHHHhc----CChhhhhcCceeEEeecCCCCCcceEEEEEecC---CcEEE
Q 002430 368 ARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWHR 425 (923)
Q Consensus 368 ~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~---g~~~~ 425 (923)
..|++. ..+|+.+.|+++++ ++.++.++..+.+.++||+|.+|+.-.++...+ .+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 555432 13588899999876 455778888999999999999999988877544 57889
Q ss_pred EEcCcHHHHHHhccC----------ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-----------CCCCCCceE
Q 002430 426 ASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQL 484 (923)
Q Consensus 426 ~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-----------~~~e~~l~l 484 (923)
..|||||.++++|+. ++...+.+++...++...|-||++++++.+++++. +.+..+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 999999999999973 44567788888999999999999999999886542 234578999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCC----------------------CCcc
Q 002430 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSSL 542 (923)
Q Consensus 485 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l 542 (923)
+|++++.||||..+|+++.+||.|||||+|+||||+.||++||++.||..+..+ ..++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 999999999999999999999999999999999999999999999997542110 0123
Q ss_pred cCcccccccCcchHHHHhhhcC--eEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhh
Q 002430 543 LGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 619 (923)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~ 619 (923)
+|.+. ..++.+++++++++.. ||||.||+||+.||+.+|++|.+|++||||+||+||||+|||||||| .|+|++|+
T Consensus 662 hG~eL-~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSEL-PDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred ecccc-cccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 34433 3678889999998765 99999999999999999999999999999999999999999999999 99999999
Q ss_pred ccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCcHHHHHHHHHHhccc-cccccc
Q 002430 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISK 697 (923)
Q Consensus 620 aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~-~~~~~~~~~~~~il~i~l~~d~~-~~~l~~ 697 (923)
|||++|+||||++|+..|++||-+|+|+||.+.|.+++|++.+..++.+ ++..|+|+.++++|+|.+.+|+. +++++|
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 9999999999999999999999999999999999999999877766554 45688999999999999999987 699999
Q ss_pred CCCCCC-----CC-C--CchhHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhcccccccc----------CccccCCCHHH
Q 002430 698 DRVKPS-----PQ-P--DSWKLKEIFAT-GVVLGSYLAIMTVVFFW-LMRKTDFFSDAF----------GVRSLRTRPDE 757 (923)
Q Consensus 698 ~~~~~~-----~~-p--~~~~~~~~~~~-~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~----------g~~~~~~~~~~ 757 (923)
|.++.. || | ++.-..+++.+ ++..|+++++..|+.|+ ++...||+|... +++++.|++++
T Consensus 821 E~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQ 900 (1019)
T KOG0203|consen 821 EKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQ 900 (1019)
T ss_pred cCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccc
Confidence 987543 21 2 23333454444 46779999999996655 445566765431 12333333322
Q ss_pred -------------HHHHHHHHHHHHHHHHhhhhccCCCC--cccchhHHHHHHHHHHHHHHHHHHHhhc-ccccccccch
Q 002430 758 -------------MMAALYLQVSIISQALIFVTRSRSWS--FIERPGLLLATAFVIAQLVATFIAVYAN-WSFARIEGCG 821 (923)
Q Consensus 758 -------------~~t~~f~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 821 (923)
++|..|.++++.|.+..+.+.+++-+ -....||.+++++++-.+++.++++-.. ...+.+.++.
T Consensus 901 eWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~ 980 (1019)
T KOG0203|consen 901 EWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLK 980 (1019)
T ss_pred cccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCC
Confidence 56888999999999988877776643 3456777888998888887777653321 1234577889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002430 822 WGWAGVIWLYSLVTYFPLDILKFGIRYIL 850 (923)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 850 (923)
|.||++.+.++++.++.+|+.|++.|.+-
T Consensus 981 ~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 981 FQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred cEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 99999999999999999999999988763
No 15
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=5.9e-114 Score=1083.35 Aligned_cols=751 Identities=21% Similarity=0.262 Sum_probs=592.1
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 002430 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (923)
Q Consensus 35 ~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 114 (923)
.+|||++|+++|+++||+|+++.+++++|..|++++++|++++++++++++++. .+|.+++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998889999999999999988877775555442 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEe--CCCeeccceEEEecCCeEEEeccccCCCcc
Q 002430 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (923)
Q Consensus 115 ~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~--~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~p 192 (923)
++++++|+.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +||.|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888644 567999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------Ccccccceeec-------CeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHH
Q 002430 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLT 246 (923)
Q Consensus 193 v~K~~~------------------~~v~~Gt~v~~-------G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~ 246 (923)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+++... ...+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 78999999999999999999988665 45678888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhcc
Q 002430 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (923)
Q Consensus 247 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg 326 (923)
++..+++++.++++++. +..+...+.++...+..++.+++++||++||++++++++.|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 77655433332222221 11122235678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCccccCcceeeeeeeeecccC----------CChHHHHHHHHHHcc------ccCcchHHHHHHHhcCCh
Q 002430 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP 390 (923)
Q Consensus 327 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~----------~~~~~~l~~a~~~~~------~~~~~~~~~ai~~~~~~~ 390 (923)
++|++|||||||||+|+|+|.++........ .....++...+.|+. ...+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998764211100 011122222222221 123699999999876421
Q ss_pred ----hh--h-------------hcCceeEEeecCCCCCcceEEEEEecC-CcEEEEEcCcHHHHHHhccCChhHHHHHHH
Q 002430 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (923)
Q Consensus 391 ----~~--~-------------~~~~~~l~~~~F~s~~k~~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 450 (923)
.+ . ...+++++.+||+|.+|||+++++..+ +++++++|||||.|+++|+. +..++.+++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 245788999999999999999998654 56789999999999999984 345778889
Q ss_pred HHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHH
Q 002430 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (923)
Q Consensus 451 ~i~~~a~~GlR~l~~A~~~~~~~--------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 522 (923)
.+++|+++|+||||+|||++++. ++++.|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC---------------------------------------------------CcccCcccc--c
Q 002430 523 GKETGRRLGMGTNMYPS---------------------------------------------------SSLLGQDKD--A 549 (923)
Q Consensus 523 A~~ia~~~Gi~~~~~~~---------------------------------------------------~~l~~~~~~--~ 549 (923)
|.+||++|||.++.... .+++|.+.+ .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996532100 011111110 0
Q ss_pred ccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC
Q 002430 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (923)
Q Consensus 550 ~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~ 629 (923)
.++++++.+++.+..||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+|+
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1233467778889999999999999999999999999999999999999999999999999864 555 79999999999
Q ss_pred chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhccc-ccccccCCCCCC---CC
Q 002430 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PQ 705 (923)
Q Consensus 630 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~---~~ 705 (923)
|++++.+|++||+++.|+++.+.|.+.+++..++..++ ....+.+|+++|++|++++++.+ .++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999998866554433 33466899999999999999977 688888877553 22
Q ss_pred C-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccc-cCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 002430 706 P-DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRS-LRTRPDEMMAALYLQVSIISQALIFVTRSRSWS 783 (923)
Q Consensus 706 p-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~ 783 (923)
| .+...+..+...+.+++++.++.+..|++....+|+......+. -........|++| .++.++++..+..++.+..
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 3 22333445555667778888777777766665555421111000 0011233468888 5666777777777776643
Q ss_pred c----ccchhHHHHHHHHHHHHH
Q 002430 784 F----IERPGLLLATAFVIAQLV 802 (923)
Q Consensus 784 ~----~~~~~~~l~~~~~~~~~~ 802 (923)
+ +.|+ ++++++++..++
T Consensus 1002 f~~~~~~N~--~~~~~~~~~~~~ 1022 (1054)
T TIGR01657 1002 FREPIYKNK--PFVYLLITGLGL 1022 (1054)
T ss_pred hhhhHHHhH--HHHHHHHHHHHH
Confidence 3 3343 445555444333
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1e-103 Score=993.81 Aligned_cols=787 Identities=18% Similarity=0.222 Sum_probs=582.1
Q ss_pred cCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (923)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~ 125 (923)
|..|.+.+.|+++| +.|++||++|++++|+++++++++...... ..+...++++++++++++.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998875 789999999999999999999998643322 234455667777779999999999999998
Q ss_pred HHHHhhcCCCcEEEEeC-CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC----eEEEeccccCCCcceecCCC--
Q 002430 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP----LKIDQSALTGESLPVTKNPY-- 198 (923)
Q Consensus 126 ~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~~-- 198 (923)
.++. ..++++|+|| |++++++|+||+|||+|.|++||.||||++|+++++ |+||||+|||||+|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 4578999997 899999999999999999999999999999998544 99999999999999988641
Q ss_pred ----------------------------------------------Ccccccceeec-CeEEEEEEEecchhhHHhHHhh
Q 002430 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (923)
Q Consensus 199 ----------------------------------------------~~v~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~l 231 (923)
|.+++||.+++ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 46789999999 89999999999999887532
Q ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cch---------------HHHHHHHHHHHHhhccC
Q 002430 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (923)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~lli~~iP~ 292 (923)
.....+.+++++.++++..+++++.++.+++..++.+.+.. ..| ...+..+++++..++|+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 12235789999999999877554433323222222211111 011 12567788999999999
Q ss_pred chhHHHHHHHHHHH------hhhhcC----CceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCC----
Q 002430 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV---- 358 (923)
Q Consensus 293 ~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~---- 358 (923)
+||+++++++++++ .+|.++ ++++|+.+++|+||+|++||+|||||||+|+|+++++.+....++.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788864 5999999999999999999999999999999999998763211100
Q ss_pred -----------------------------C----------------hHHHHHHHHHHccc-------c-------CcchH
Q 002430 359 -----------------------------E----------------KEHVILLAARASRT-------E-------NQDAI 379 (923)
Q Consensus 359 -----------------------------~----------------~~~~l~~a~~~~~~-------~-------~~~~~ 379 (923)
+ ..+.+..++.|+.. . .++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 01223333333211 0 25899
Q ss_pred HHHHHHhcCCh---------h---------hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC-
Q 002430 380 DAAIVGMLADP---------K---------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (923)
Q Consensus 380 ~~ai~~~~~~~---------~---------~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 440 (923)
|.|++.++... . .....|++++.+||+|.||||++++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 99999875321 1 0124688899999999999999999988888999999999999999984
Q ss_pred ChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCceEEEEeccCCCCC
Q 002430 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPR 495 (923)
Q Consensus 441 ~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr 495 (923)
+++.++.+.+++++|+.+|+|||++|+|.+++++. +.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999875421 34689999999999999999
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCC-----------------------------------
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~----------------------------------- 540 (923)
+|++++|+.||+|||+|||+|||+++||.+||++|||.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975421100
Q ss_pred ----cccCcccccccCc---chHHHHhhhcC--eEEecChhhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 541 ----SLLGQDKDASIAA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 541 ----~l~~~~~~~~~~~---~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
++.|...+..+++ ..+.+++.+++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 1222221111111 12344555555 99999999999999999998 99999999999999999999999998
Q ss_pred -c-cchHHHhhccCEEecCCCchhHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcHHHHHH
Q 002430 611 -A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKF----DFSPFMVLI 683 (923)
Q Consensus 611 -g-~gtd~A~~aADivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~----~~~~~~il~ 683 (923)
| +|. .|+.|||++|.+ |..+..++ .|||++|+|+++++.|.+++|+.+++..+++.++..+ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 444 466799999975 99999987 7999999999999999999999888877777665433 578889999
Q ss_pred HHHHhccc-ccccccCCCCCC-----CCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcc
Q 002430 684 IAILNDGT-IMTISKDRVKPS-----PQPD--------SWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (923)
Q Consensus 684 i~l~~d~~-~~~l~~~~~~~~-----~~p~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (923)
+|++.+.+ +++++....+++ ..|. .....+.|..+++.|++++++++++.++.+...... ..|
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g-- 947 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG-- 947 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC--
Confidence 99999875 577764322221 1222 111233455567789999998886655544321111 112
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhh-c---ccccccccchhhHH
Q 002430 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYA-N---WSFARIEGCGWGWA 825 (923)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~ 825 (923)
...+.....+..|+.+++..++.++. .++.|+|...... ++++++..+...++..+. . ++.......++.+|
T Consensus 948 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~wt~~~~~~~--~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~ 1023 (1057)
T TIGR01652 948 -SLDDFSSVGVIVFTALVVIVNLKIAL-EINRWNWISLITI--WGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFW 1023 (1057)
T ss_pred -cccchhhHHHHHHHHHHHHHHHHHHH-HHhHhHHHHHHHH--HHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHH
Confidence 11234456677888777777666532 3445554332211 122221111111111110 0 01111111245567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 002430 826 GVIWLYSLVTYFPLDILKFGIRYILSGK 853 (923)
Q Consensus 826 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 853 (923)
+.+++..++.++++.++|.+++.+.|+.
T Consensus 1024 l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 1024 LVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 7777888888899999999999888754
No 17
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.6e-99 Score=945.13 Aligned_cols=782 Identities=16% Similarity=0.169 Sum_probs=568.7
Q ss_pred hhcCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (923)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~ 123 (923)
.+|..|.+.+.|+++| +.+++||..+.|++|+++++++++..... ...+...+++++++++.++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999875 67889999999999999999999864332 22456778888999999999999999999
Q ss_pred HHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecCCC-
Q 002430 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (923)
Q Consensus 124 ~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~~~- 198 (923)
++.++. ++..++|+|+|++++++|++|+|||+|.|++||.||||++|++++ .|+||||+|||||+|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 988765 357899999999999999999999999999999999999999843 499999999999999999753
Q ss_pred --------------------------------------------CcccccceeecC-eEEEEEEEecchhhHHhHHhhhh
Q 002430 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (923)
Q Consensus 199 --------------------------------------------~~v~~Gt~v~~G-~~~~~V~~tG~~T~~g~i~~l~~ 233 (923)
|.+++||.+++. .+.|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 345667777776 49999999999997421 1112
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccc-c---------------------c---h----HHHHHHH
Q 002430 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--MYPVQH-R---------------------K---Y----RDGIDNL 282 (923)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~--~~~~~~-~---------------------~---~----~~~~~~~ 282 (923)
...+.+++++.+|++..+++++.++.+++..+. .|.... . + + ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 224789999999998876544333322222222 121100 0 0 0 1123334
Q ss_pred HHHHHhhccCchhHHHHHHHHHHHhhhhcCC----------ceeccCchhhhccCceEEEecCCCccccCcceeeeeeee
Q 002430 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (923)
Q Consensus 283 ~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 352 (923)
++++...||++|++++++++..++..+.++. +.||+.+.+|+||+|++||+|||||||+|+|+++++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5677799999999999999988888887765 789999999999999999999999999999999999873
Q ss_pred ecccC-----------------------------------------CC-h-----HHHHH-HHHHHcccc----------
Q 002430 353 VFAKG-----------------------------------------VE-K-----EHVIL-LAARASRTE---------- 374 (923)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~-~a~~~~~~~---------- 374 (923)
+..++ .+ + .+.+. ++.|++...
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21110 00 0 11223 333332211
Q ss_pred -------CcchHHHHHHHhcCC----------------hhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcH
Q 002430 375 -------NQDAIDAAIVGMLAD----------------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (923)
Q Consensus 375 -------~~~~~~~ai~~~~~~----------------~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~ 431 (923)
..+|.|.|++.++.+ ....+..|++++.+||+|+|||||+++++++|++++++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 126899999887632 122456789999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCceE
Q 002430 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (923)
Q Consensus 432 e~il~~~~~~--~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-------------------------~~~e~~l~l 484 (923)
|.|+++|+.. +..++++++++++|+++|+|||++|||.+++++. +.+|.+|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3567788999999999999999999999975421 346899999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcc----------------------
Q 002430 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL---------------------- 542 (923)
Q Consensus 485 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l---------------------- 542 (923)
+|+++++||||++++++|++|+++||+|||+|||+.+||++||++|||.++....-.+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997643211011
Q ss_pred -------------------------cCcccccccC---cchHHHHhhhcC--eEEecChhhHHHHHHHHhhC-CCEEEEE
Q 002430 543 -------------------------LGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (923)
Q Consensus 543 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--vfar~sP~~K~~iV~~lq~~-g~~V~m~ 591 (923)
.|...+..++ .+.+.+++.+++ ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1110000001 123445555555 79999999999999999997 6899999
Q ss_pred cCCccChHhhhcCCeeeEe-c-cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 592 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669 (923)
Q Consensus 592 GDG~NDapaLk~AdVGIam-g-~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~ 669 (923)
|||+||+||||+|||||++ | +|.+|++ |||+++.++++..-+.++ |||+.|+|+.+.+.|.+++|+.+++..+++.
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQFRFLVPLLLV-HGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhhhHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 5 6777666 999999888776665555 9999999999999999999999999999988
Q ss_pred HhhcCC----CcHHHHHHHHHHh-cccccccc-cCCCCCC----CCC---------CchhHHHHHHHHHHHHHHHHHHHH
Q 002430 670 LIWKFD----FSPFMVLIIAILN-DGTIMTIS-KDRVKPS----PQP---------DSWKLKEIFATGVVLGSYLAIMTV 730 (923)
Q Consensus 670 ~~~~~~----~~~~~il~i~l~~-d~~~~~l~-~~~~~~~----~~p---------~~~~~~~~~~~~~~~g~~~~~~~~ 730 (923)
++.+|. +.++.+.+.|++. .++++.++ +|+.-+. ..| ..++ .+.|+.+++.|+++++++|
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n-~~~F~~w~~~~i~qs~iif 1034 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYN-SKLFWLTMIDTLWQSAVVF 1034 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccC-HHHHHHHHHHHHHHHHHHH
Confidence 876654 4455555555544 44455553 4443221 112 2222 3456667888999999888
Q ss_pred HHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHh-
Q 002430 731 VFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVY- 809 (923)
Q Consensus 731 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 809 (923)
++.++.+.... .+ .....+++++.++++.++.++ ..+++|.|...... ++++++..+...++...
T Consensus 1035 f~~~~~~~~~~----~~-------~~~~~~~~~~~~v~~vnl~i~-~~~~~wt~~~~~~i--~~Si~~~~i~~~~~~~~~ 1100 (1178)
T PLN03190 1035 FVPLFAYWAST----ID-------GSSIGDLWTLAVVILVNLHLA-MDIIRWNWITHAAI--WGSIVATFICVIVIDAIP 1100 (1178)
T ss_pred HHHHHHhcCCC----cC-------ceeEhHhhhhHHHHHHHHHHH-HHHhhhhHHHHHHH--HHHHHHHHHHHHHHHhcc
Confidence 66555442211 01 001224445555555555433 34445655433322 22222111111111100
Q ss_pred --hc-ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 002430 810 --AN-WSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKA 854 (923)
Q Consensus 810 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~ 854 (923)
.. +.+..+ ...+.+|+.+++..++.++++.++|++++.++|...
T Consensus 1101 ~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~ 1147 (1178)
T PLN03190 1101 TLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDV 1147 (1178)
T ss_pred cchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 00 111111 123557777788888889999999999999988663
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.7e-98 Score=877.61 Aligned_cols=546 Identities=22% Similarity=0.341 Sum_probs=453.5
Q ss_pred HHhhchHHHHHHHHHHHHHHHhcCCC--CCCch--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-cEE
Q 002430 68 GFMWNPLSWVMEAAAIMAIALANGGG--RDPDW--QDFVGIIVLLVINSTISFIE----ENNAGNAAAALMANLAP-KTK 138 (923)
Q Consensus 68 ~~~~~~~~~~l~~~ail~~~l~~~~~--~~~~~--~~~~~i~~~~~~~~~~~~~~----e~~~~~~~~~l~~~~~~-~~~ 138 (923)
.+|+||+.|+++++++++++++.... ....| .+.+.|.++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46899999999999999998763110 01112 45677778888888888777 78999999999998886 776
Q ss_pred -EEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CcccccceeecCeEEE
Q 002430 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (923)
Q Consensus 139 -V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~ 214 (923)
|.|||++++|++++|+|||+|.|++||+|||||++++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 579999999999999999999 8899999999999999
Q ss_pred EEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCc
Q 002430 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (923)
Q Consensus 215 ~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~ 293 (923)
+|+++|.+|++||+.++++.++ +++|+|.....+...+.++++ +++.++..+ ....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l--~~~~~~~~~-~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFL--VVILTMYPL-AKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHH--HHHHHHHHH-HhhccHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998874 788998766554432221111 111111111 111234456677888889999999
Q ss_pred hhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccc
Q 002430 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (923)
Q Consensus 294 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~ 373 (923)
||..++++.+.|+++|+|+|+++|+++++|++|++|++|||||||||+|++.+.+... ..+.+.++++..++.++..
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIA 340 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998777665431 2244556677776666654
Q ss_pred cCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCCh-hHHHHHHHHH
Q 002430 374 ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHAVI 452 (923)
Q Consensus 374 ~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~i 452 (923)
. .||++.|++.++..... .......+++||++.+|+|++.+ +|+ .+.||+|+.++++|+... ..+..+++.+
T Consensus 341 s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 341 D-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred C-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 4 49999999987642110 00011235689999999999864 343 466999999999997421 2234466777
Q ss_pred HHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCC
Q 002430 453 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (923)
Q Consensus 453 ~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi 532 (923)
++++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||
T Consensus 414 ~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 889999999999874 3489999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEecc
Q 002430 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (923)
Q Consensus 533 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~ 612 (923)
. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 4 2699999999999999999999999999999999999999999999999
Q ss_pred chHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIAL 670 (923)
Q Consensus 613 gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~ 670 (923)
|||+||++||+||+||||++|++++++||++|.|+++++.|.++.|+..++..+...|
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987766554443
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.1e-94 Score=848.31 Aligned_cols=538 Identities=24% Similarity=0.320 Sum_probs=452.9
Q ss_pred HHHhhchHHHHHHHHHHHHHHHhcCC----C---CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cEE
Q 002430 67 LGFMWNPLSWVMEAAAIMAIALANGG----G---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTK 138 (923)
Q Consensus 67 l~~~~~~~~~~l~~~ail~~~l~~~~----~---~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~ 138 (923)
-.||+||+.++++++++++++++... + ....|...+.+++.+++...++.++|+|+++++++|++..+. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35899999999999999999986311 1 112344445555666677777889999999999999998875 799
Q ss_pred EEeCCe-EEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCc---ccccceeecCeEEE
Q 002430 139 VLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEA 214 (923)
Q Consensus 139 V~Rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~~ 214 (923)
|+|||+ +++|++++|+|||+|.|++||.|||||++++| ...||||+|||||.||.|++|+. +|+||.|.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 99999999999999999999999999999999 58999999999999999999988 99999999999999
Q ss_pred EEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCc
Q 002430 215 VVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (923)
Q Consensus 215 ~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~ 293 (923)
+|+++|.+|++||+.++++.+ .+++|+|..++.+...+..++++.++..+.+.++ .+.. .++..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999887 4678999887776655433222222221112221 1222 36788899999999999
Q ss_pred hhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccc
Q 002430 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (923)
Q Consensus 294 L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~ 373 (923)
|+..++++...|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|.+.++.. ..+.+.++++..++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999988652 2356677788877777665
Q ss_pred cCcchHHHHHHHhcCCh---hhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCC-hhHHHHHH
Q 002430 374 ENQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (923)
Q Consensus 374 ~~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 449 (923)
.+ ||.+.|++.++... ......++..+++||++.++++++.+ +| ..++||++|.+++.|+.. ...+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 54 89999998876431 11111245677899999988887643 35 578999999999999642 23456778
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 529 (923)
+.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999974 389999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 530 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+||+ ++|||++||||+++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 2699999999999999999999999999999999999999999999
Q ss_pred eccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 002430 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (923)
Q Consensus 610 mg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~ 660 (923)
||+|||+||++||+||+||||++|++++++||++.-.--....|++..-+.
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~ 582 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVA 582 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHH
Confidence 999999999999999999999999999999999984444556666654443
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-91 Score=797.07 Aligned_cols=702 Identities=22% Similarity=0.332 Sum_probs=523.5
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 002430 26 EVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGII 105 (923)
Q Consensus 26 ~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~ 105 (923)
+.........+||+.+++.+|+..||+|.+..+.++.+..++++..+|+ +++.+..+.-|... .+++.+..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 3344444457899999999999999999999999999999999999999 66776666655532 2555666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeC-CCeeccceEEEecCCeEEEec
Q 002430 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQS 184 (923)
Q Consensus 106 ~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~-Gd~IPaD~~ll~g~~~~Vdes 184 (923)
++.+.+...+.+|.++..+.+..+-+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 77788888899999999888877543 4468999999999999999999999999998 8999999999999 6999999
Q ss_pred cccCCCcceecCCC-------------------Ccccccceeec------CeEEEEEEEecchhhHHhHHhhhhccCCCC
Q 002430 185 ALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (923)
Q Consensus 185 ~LTGEs~pv~K~~~-------------------~~v~~Gt~v~~------G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~ 239 (923)
+|||||.||.|.+. +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.++ +.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk-P~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK-PV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC-Cc
Confidence 99999999999874 46899999986 569999999999999998887665543 22
Q ss_pred cHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceec
Q 002430 240 HFQKVLTAI--GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (923)
Q Consensus 240 ~~~~~~~~i--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk 317 (923)
+++-.-+.+ ..++.++.+++.+. .++.+...+.+....+..++.++.+.+|+|||.++++....+..||.|+||+|-
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy-~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIY-TAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH-HhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 333222322 22222222221221 112223456788889999999999999999999999999999999999999999
Q ss_pred cCchhhhccCceEEEecCCCccccCcceeeeeeeeecc---c---------------------CCCh--HHHHHHHHHHc
Q 002430 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---K---------------------GVEK--EHVILLAARAS 371 (923)
Q Consensus 318 ~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~---~---------------------~~~~--~~~l~~a~~~~ 371 (923)
+++.+...|++|++|||||||||++.+.+..+....-+ . ...+ .....+|.|++
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999998765531100 0 0001 11222233332
Q ss_pred cc-----cCcchHHHHHHHhcC------------------------Chhh--------hh-cCceeEEeecCCCCCcceE
Q 002430 372 RT-----ENQDAIDAAIVGMLA------------------------DPKE--------AR-AGVREVHFLPFNPVDKRTA 413 (923)
Q Consensus 372 ~~-----~~~~~~~~ai~~~~~------------------------~~~~--------~~-~~~~~l~~~~F~s~~k~~s 413 (923)
.. -.+||+|..+.+..+ +|.+ .. ..+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 11 135777655443221 1111 01 1477889999999999999
Q ss_pred EEEEec-CCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCC--------CCCCCCCCceE
Q 002430 414 LTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQL 484 (923)
Q Consensus 414 v~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~--------~~~~~e~~l~l 484 (923)
|++.++ +.+..+|+|||||.|.+.|+ .+.+++.+++.+++|+.+|+|++|+|+|.++.. .++..|.+|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999875 46789999999999999998 467788999999999999999999999999876 36788999999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC----------Cc-------------
Q 002430 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS----------SS------------- 541 (923)
Q Consensus 485 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~----------~~------------- 541 (923)
+|++.||+++|++++.+|++|++|.||++|+||||..||..+||+|||....... ..
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 9999999999999999999999999999999999999999999999996521100 00
Q ss_pred -ccC----------cc----------cccccCc-----------chHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEE
Q 002430 542 -LLG----------QD----------KDASIAA-----------LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICG 589 (923)
Q Consensus 542 -l~~----------~~----------~~~~~~~-----------~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~ 589 (923)
..+ .. -.-.+++ +.+++++.+.+|||||+|+||.++|+.||+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 000 00 0001222 235667778899999999999999999999999999
Q ss_pred EEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 590 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIA 669 (923)
Q Consensus 590 m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~ 669 (923)
|||||+||+.|||+|||||+++++. |.-||.+.---++.+.+++.|++||..+..--..+.|...+.+..++..++ +
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~-L 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF-L 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe-e
Confidence 9999999999999999999998543 445788887778999999999999998777666777766555443332221 1
Q ss_pred HhhcCCCcHHHHHHHHHHhccc-cccccc----CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 002430 670 LIWKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFF 742 (923)
Q Consensus 670 ~~~~~~~~~~~il~i~l~~d~~-~~~l~~----~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 742 (923)
..-+..++.+|.+++.++-..+ +..++. ++..+.|+|.+.-.++.+.--+.+-++..++-+..+++....+|+
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~ 1011 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWY 1011 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccce
Confidence 2235678888999888876544 334433 233334444443333333332222222333333333444444554
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.5e-89 Score=806.54 Aligned_cols=542 Identities=23% Similarity=0.323 Sum_probs=454.4
Q ss_pred HHhhchHHHHHHHHHHHHHHHhcC----C--CCCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cE
Q 002430 68 GFMWNPLSWVMEAAAIMAIALANG----G--GRDPDWQDF---VGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (923)
Q Consensus 68 ~~~~~~~~~~l~~~ail~~~l~~~----~--~~~~~~~~~---~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 137 (923)
.||.||+.++++++++++++++.. + +....|++. +.+++.+++...++.++|+|++++.++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 478999999999999999997531 1 111246654 3344456777788889999999999999998877 48
Q ss_pred EEEe-CCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCc---ccccceeecCeEE
Q 002430 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (923)
Q Consensus 138 ~V~R-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~---v~~Gt~v~~G~~~ 213 (923)
+|+| ||++++|++++|+|||+|.|++||+|||||++++| .+.||||+|||||.||.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 99999999999999999999999999999999999 68999999999999999999975 8999999999999
Q ss_pred EEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccC
Q 002430 214 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (923)
Q Consensus 214 ~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~ 292 (923)
++|+++|.+|++||+.++++.+ .+++|+|..++.+..++.+++++..+. +..+..+. .....+...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 467899988877665543322221111 11111111 1223567778999999999
Q ss_pred chhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcc
Q 002430 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (923)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 372 (923)
+|+...+.....|+.+|+++|+++|++.++|+||++|+||||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 88877777777899999999999999999999999999999999999999999988752 235667788888877766
Q ss_pred ccCcchHHHHHHHhcCChh--hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCC-hhHHHHHH
Q 002430 373 TENQDAIDAAIVGMLADPK--EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (923)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~--~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 449 (923)
.. .||.+.|++.++.... .....++..++.||++.++++++.+. +| ..++||+||.+++.|+.. ...++.++
T Consensus 341 ~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 AD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 54 4899999988764211 11112345678999999877765432 45 578999999999988532 23346678
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 529 (923)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..||.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999853 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 530 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 2699999999999999999999999999999999999999999999
Q ss_pred eccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664 (923)
Q Consensus 610 mg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 664 (923)
|++|+++|+++||++++||||++|+.++++||+++-+......|+++.++.-++.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 9999999999999999999999999999999999999999999998887765443
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.6e-92 Score=851.23 Aligned_cols=791 Identities=18% Similarity=0.208 Sum_probs=580.7
Q ss_pred HHhhcCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002430 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (923)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~ 121 (923)
+..+|-.|.+.+.|++++ +.+++||.++.|++|++.++++++. .. +...|...+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 556999999999998764 7889999999999999999999986 22 4457788889999999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEeCCe-EEEEeCCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCcceecC
Q 002430 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (923)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~K~ 196 (923)
+++....++ ..++.|.|++. +++..|++|++||+|++..++.+|||.+|++++ .|+|++++|+||++++.|+
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999887654 47889998644 899999999999999999999999999999653 4999999999999999886
Q ss_pred CC-----------------------------------------------CcccccceeecCe-EEEEEEEecchhhHHhH
Q 002430 197 PY-----------------------------------------------DEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (923)
Q Consensus 197 ~~-----------------------------------------------~~v~~Gt~v~~G~-~~~~V~~tG~~T~~g~i 228 (923)
.. +++++|+++++++ +.++|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 41 3577889998886 79999999999987643
Q ss_pred HhhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc---c--------c-----chHHHHHHHHHHHHhhc
Q 002430 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIM--YPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (923)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~--~~~~---~--------~-----~~~~~~~~~~~lli~~i 290 (923)
... ...+.+.+++.++.+...++++++..+++..+.. |... . . .....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 222 3357788899888876654443333222222111 1110 0 0 01123566788899999
Q ss_pred cCchhHHHHHHHHHHHhhhh----------cCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCCh
Q 002430 291 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (923)
Q Consensus 291 P~~L~~~~~~~~~~~~~~l~----------~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 360 (923)
|++|++.+++....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+.+..++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999884443 35789999999999999999999999999999999999998654333211
Q ss_pred H--------------------------------------------HHH-HHHHHHcccc------------CcchHHHHH
Q 002430 361 E--------------------------------------------HVI-LLAARASRTE------------NQDAIDAAI 383 (923)
Q Consensus 361 ~--------------------------------------------~~l-~~a~~~~~~~------------~~~~~~~ai 383 (923)
+ +.. .+|.+++..+ .+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 112 2222222111 125667777
Q ss_pred HHhcCCh---------h-------hhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhcc-CChhHHH
Q 002430 384 VGMLADP---------K-------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (923)
Q Consensus 384 ~~~~~~~---------~-------~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 446 (923)
+..+.+. + .....|+.++.++|+|.||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7655321 0 013578999999999999999999999999999999999999999998 5567788
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeecCCCCC-------------------------CCCCCCceEEEEeccCCCCCccHHHH
Q 002430 447 KVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAET 501 (923)
Q Consensus 447 ~~~~~i~~~a~~GlR~l~~A~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr~~~~~~ 501 (923)
+.++++++||.+|+||||+|||+++++++ +.+|++|+++|.+++||++|+|||++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 89999999999999999999999987652 35799999999999999999999999
Q ss_pred HHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc--------------------------------------
Q 002430 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-------------------------------------- 543 (923)
Q Consensus 502 I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~-------------------------------------- 543 (923)
|+.|++||||+||+|||+.+||.+||.+|++.++.+..-.+.
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 999999999999999999999999999999976533211111
Q ss_pred -------CcccccccCcch---HHHHhh--hcCeEEecChhhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 544 -------GQDKDASIAALP---VDELIE--KADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 544 -------~~~~~~~~~~~~---~~~~~~--~~~vfar~sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
|......+++++ +-++.. +..+|||++|.||+.+|+..++. +.+++++|||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 000000111111 112221 34699999999999999999854 89999999999999999999999999
Q ss_pred c--cchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----cHHHHHHH
Q 002430 611 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDF----SPFMVLII 684 (923)
Q Consensus 611 g--~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~----~~~~il~i 684 (923)
+ +|.+|++ +||+.+.+++|...+.+| ||||.|.|+.+++.|.+++|+.+.+..+++.++.+|.. .++.+.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 7887777 999999999999988877 99999999999999999999999999999988766533 33333333
Q ss_pred HHHh-cccccccccCCCCCC--------------CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCcc
Q 002430 685 AILN-DGTIMTISKDRVKPS--------------PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVR 749 (923)
Q Consensus 685 ~l~~-d~~~~~l~~~~~~~~--------------~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 749 (923)
|++. ..+++.++.-..+.+ +....++ .+.|+.+++.|+++++++|++++..+... .....|
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~-~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G-- 973 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFN-WKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNG-- 973 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccc-hHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCC--
Confidence 3333 333455543222211 1112233 34566677889999999998777666422 111111
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhhc-----------ccccccc
Q 002430 750 SLRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIERPGLLLATAFVIAQLVATFIAVYAN-----------WSFARIE 818 (923)
Q Consensus 750 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 818 (923)
...+.....+.+|+.+++...+. ....+.+|.|.+... +++.++...++++ +|.. .++....
T Consensus 974 -~~~d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i~---i~gSi~~~f~f~~--iy~~~~~~~~~~~~~~~~~~~~ 1046 (1151)
T KOG0206|consen 974 -LTADYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHIV---IWGSILLWFVFLF--IYSELTPAISTPDPFYGVAEHL 1046 (1151)
T ss_pred -CcCChhhccceEEEEEEEEEEee-eeeeehheeHHHHHH---HHHHHHHHHHHHH--HHhccccccCCCccHHHHHHHH
Confidence 11122223344454444433333 223334566554432 2222222222111 2210 1112233
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhh
Q 002430 819 GCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAWDT 857 (923)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 857 (923)
..+..+|+++++.+++.++++.++|.+++.++|.+....
T Consensus 1047 ~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1047 LSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDII 1085 (1151)
T ss_pred hcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHH
Confidence 345568888899999999999999999999999985443
No 23
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-86 Score=777.51 Aligned_cols=505 Identities=28% Similarity=0.395 Sum_probs=440.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe-CCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 175 (923)
+|.+++++++++++...++.+...|+++++++|++..|.++++++ ||++++||.++|+|||+|.|++||+||+||++++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 347788888999999999999999999999999999999997776 5669999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002430 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 254 (923)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~ 254 (923)
| ...||||+|||||.||.|.+||.|++||.+.+|.....|+++|.+|.+++|.++++++ .++++.|+..++++.+++.
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 5689999999999999999999999999999999999999999999999999999988 4889999999999999887
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEec
Q 002430 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (923)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~D 334 (923)
.+++..++.++++++....+|..++..++++++++|||+|.+++|++...|..+.+++|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 55554555555343344468889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEE
Q 002430 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (923)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv 414 (923)
||||||+|+++|.++.. .. + ++++++.+++..+..++ ||+..||++++.+.. ....+..+.+|- +....
T Consensus 412 KTGTLT~G~p~v~~v~~--~~-~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G----~Gv~~ 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--LD-G-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG----RGVEA 480 (713)
T ss_pred CCCCCcCCceEEEEEec--CC-C-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc----CcEEE
Confidence 99999999999998763 22 3 77889999988877766 999999999664321 111222333331 11111
Q ss_pred EEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCC
Q 002430 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (923)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~l 494 (923)
..+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++... +++|+++++|++
T Consensus 481 ---~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 ---EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred ---EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1256 4667799998764221 1111 4566778888999988898875 899999999999
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhH
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 574 (923)
|||++++|++||+.|+++.|+||||..+|.+||+++||+. ++|.+.||||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999942 6999999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002430 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (923)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (923)
.++|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++++++.++.+++.+|+++++||+|+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002430 655 VSITIRIVLGF 665 (923)
Q Consensus 655 ~~~ni~~~~~~ 665 (923)
+.+|...+...
T Consensus 669 ~~yn~~~iplA 679 (713)
T COG2217 669 FGYNAIAIPLA 679 (713)
T ss_pred HHHHHHHHHHH
Confidence 99998655543
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4.3e-81 Score=758.29 Aligned_cols=499 Identities=26% Similarity=0.363 Sum_probs=437.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEec
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g 176 (923)
.|.++++++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 68888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHH
Q 002430 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 255 (923)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~ 255 (923)
...||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+|||.++++++ .+++++|+.+++++.+++..
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999887 47899999999999998766
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecC
Q 002430 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (923)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DK 335 (923)
++++.++.+++++.+.+.+|..++..++++++++|||+|.+++|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66545544444434456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEE
Q 002430 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (923)
Q Consensus 336 TGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~ 415 (923)
|||||+|+|+|.++.. ..+.++++++.+++..+.. ..||++.|+++++... +. .+||.+..+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988753 2346677888877665544 4599999999876421 11 24666666554321
Q ss_pred -EE-ecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCC
Q 002430 416 -YI-DSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (923)
Q Consensus 416 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~ 493 (923)
++ ..+|+. +..|+|+.+.+ ..+.+.+.++++..+|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 235643 44589988754 11334555678899999999999854 89999999999
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+|||++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 267789999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHH
Q 002430 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (923)
Q Consensus 574 K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 653 (923)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+++++++||++++++++..++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002430 654 AVSITIRIVL 663 (923)
Q Consensus 654 ~~~~ni~~~~ 663 (923)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
No 25
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-81 Score=719.17 Aligned_cols=535 Identities=24% Similarity=0.330 Sum_probs=450.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCe-EEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC
Q 002430 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (923)
Q Consensus 100 ~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~ 178 (923)
...+++.++.+...++.....|+..++..|++..|.++.++.+|+ .++||.+.|++||+|.|++|++||+||++++| +
T Consensus 343 t~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G-s 421 (951)
T KOG0207|consen 343 TSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG-S 421 (951)
T ss_pred ccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC-c
Confidence 445566677777788888888888999999999999999999997 89999999999999999999999999999999 5
Q ss_pred eEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHH
Q 002430 179 LKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIA 257 (923)
Q Consensus 179 ~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~ 257 (923)
++||||.+|||+.||.|++|+.|.+||.+.+|.....++++|.+|.+++|.+++++++ .+.|.|+.+|+++.+++..++
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi 501 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVI 501 (951)
T ss_pred eeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhh
Confidence 8999999999999999999999999999999999999999999999999999999985 889999999999999876666
Q ss_pred HHHHHHHHHHHhccc----------cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccC
Q 002430 258 VGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (923)
Q Consensus 258 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~ 327 (923)
+..++.++++..+.. ..+..++..++++++++|||+|.++.|++...|....+++|+++|..+++|.+.+
T Consensus 502 ~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hk 581 (951)
T KOG0207|consen 502 VLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHK 581 (951)
T ss_pred HHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhc
Confidence 545444444333222 3455678888999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCC
Q 002430 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (923)
Q Consensus 328 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s 407 (923)
++++.||||||||+|++.|.++.. .....+..+++.+++..+... .||+..|++.++.........-..+++..|..
T Consensus 582 v~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~S-eHPig~AIv~yak~~~~~~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 582 VKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGS-EHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPG 658 (951)
T ss_pred CCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCC-cCchHHHHHHHHHhcccccCccccceeecccC
Confidence 999999999999999999998774 333356666776666555444 49999999999864332111112223333333
Q ss_pred CCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 002430 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (923)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~ 487 (923)
..+...+. .+|+. ++-|.-+.+... .....+.++..+++....|..+.+++... +++|+
T Consensus 659 ~g~~~~~~---~~~~~--i~iGN~~~~~r~---~~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~gv 717 (951)
T KOG0207|consen 659 EGIYVTVT---VDGNE--VLIGNKEWMSRN---GCSIPDDILDALTESERKGQTVVYVAVNG-------------QLVGV 717 (951)
T ss_pred CCcccceE---EeeeE--EeechHHHHHhc---CCCCchhHHHhhhhHhhcCceEEEEEECC-------------EEEEE
Confidence 33221111 23433 677888887652 22234457777888889999999999987 89999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
+.++|++|||+..+|+.||+.||++.|+||||..+|+++|+++|+. +|||
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V~a 767 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NVYA 767 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eEEe
Confidence 9999999999999999999999999999999999999999999963 3799
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHH
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i 647 (923)
.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+|+.|+++|.++||+||+.+++..++.++..+|++..|+
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHhc
Q 002430 648 KNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILND 689 (923)
Q Consensus 648 ~~~i~~~~~~ni~~~~~~~~~~~~~~~~~~~~~il~i~l~~d 689 (923)
|.|+.|++.+|+..++...+.++.|++.++|++--....++.
T Consensus 848 k~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SS 889 (951)
T KOG0207|consen 848 KLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASS 889 (951)
T ss_pred HHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhh
Confidence 999999999999777766666666666678776554444443
No 26
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-80 Score=682.93 Aligned_cols=762 Identities=21% Similarity=0.258 Sum_probs=531.5
Q ss_pred HHHhhcCCCccCcccccHH----HHHHHHhhchHHHHHHHHHHHHHHHhcCCCC-CCchhhHHHHHHHHHHHHHHHHHHH
Q 002430 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGR-DPDWQDFVGIIVLLVINSTISFIEE 119 (923)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~e 119 (923)
.++++|.+|.+...|++++ ..+++||+..+++++++.++.+++.....+. ..+|...++++.+.++-..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999999887653 5677899999999999988888875433222 1244444444444444444444444
Q ss_pred HHHHHHHHHHhhcCCCcEEEE-eCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecC----CeEEEeccccCCCccee
Q 002430 120 NNAGNAAAALMANLAPKTKVL-RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (923)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V~-Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~----~~~Vdes~LTGEs~pv~ 194 (923)
+++.+ .++ ..+.+++ |||...+ |++++++||+|.+..+++||||.++|+.+ +|.|-+-.|+||+..+.
T Consensus 154 ~~rd~---~~N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDR---ELN---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhh---hhh---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 44443 332 2444444 7776655 99999999999999999999999999532 69999999999998776
Q ss_pred cCC-----------------------------------------------CCcccccceeecCeEEEEEEEecchhhHHh
Q 002430 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (923)
Q Consensus 195 K~~-----------------------------------------------~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~ 227 (923)
|-| .|+++++|.+.+|.+.|+|++||.+|.-
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 644 1579999999999999999999999962
Q ss_pred HHhhhhcc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHH
Q 002430 228 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (923)
Q Consensus 228 i~~l~~~~---~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~ 304 (923)
.++.+ .+.+.++..+|.+.+++.+.+++..++ ++.....+.+|...+..++.++...||++|-+.+.+++.+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 34433 366778888999888866554442222 2233345678888899999999999999999999999999
Q ss_pred HHhhhhcC----CceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCCh--------------------
Q 002430 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (923)
Q Consensus 305 ~~~~l~~~----~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------------------- 360 (923)
-++.+.++ |.++|..+.-|+||.++++.+|||||||+|+|.+++++.....++.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 98888775 678999999999999999999999999999999999887533222111
Q ss_pred ---------------HHHHHHHHHHccccCcchHHHHHHHhcCChhhh-----------------------------hcC
Q 002430 361 ---------------EHVILLAARASRTENQDAIDAAIVGMLADPKEA-----------------------------RAG 396 (923)
Q Consensus 361 ---------------~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~-----------------------------~~~ 396 (923)
+.+..+|.|++..+.-+ .|..+...+.+|+|. ...
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e-~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~ 538 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFE-DDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELN 538 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccC-CCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCccee
Confidence 12233333333222100 000111223334331 247
Q ss_pred ceeEEeecCCCCCcceEEEEEec-CCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCC
Q 002430 397 VREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (923)
Q Consensus 397 ~~~l~~~~F~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~ 475 (923)
|++++.+||+|++|||.++++++ .|++..|.|||+-++....+. .+++++...+||++|+|||.+|.|.++++++
T Consensus 539 yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~ey 614 (1051)
T KOG0210|consen 539 YQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEY 614 (1051)
T ss_pred EEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHH
Confidence 89999999999999999999986 689999999999998876654 3577888899999999999999999987652
Q ss_pred C--------------------------CCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002430 476 E--------------------------SPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 476 ~--------------------------~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 529 (923)
+ .+|.+++++|+++.||++|+|++.+++.||+|||||||+|||+.+||+.||++
T Consensus 615 e~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkS 694 (1051)
T KOG0210|consen 615 EAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKS 694 (1051)
T ss_pred HHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehh
Confidence 2 36899999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCccc---Ccc-------------c-ccccCcc-----------hHHHHhh--hcCeEEecChhhHHHHHH
Q 002430 530 LGMGTNMYPSSSLL---GQD-------------K-DASIAAL-----------PVDELIE--KADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 530 ~Gi~~~~~~~~~l~---~~~-------------~-~~~~~~~-----------~~~~~~~--~~~vfar~sP~~K~~iV~ 579 (923)
.++......-.++. ... . .--++++ ++.++.. .+.|+||++|+||+++++
T Consensus 695 s~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~ 774 (1051)
T KOG0210|consen 695 SRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVR 774 (1051)
T ss_pred ccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHH
Confidence 99865322111110 000 0 0012332 3334333 345899999999999999
Q ss_pred HHhhC-CCEEEEEcCCccChHhhhcCCeeeEe-c-cchHHHhhccCEEecCCCchhHHHHHH-HhHHHHHHHHHHHHHHH
Q 002430 580 RLQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAV 655 (923)
Q Consensus 580 ~lq~~-g~~V~m~GDG~NDapaLk~AdVGIam-g-~gtd~A~~aADivl~~~~~~~i~~~i~-~gR~~~~~i~~~i~~~~ 655 (923)
.+|++ |..|+.+|||.||+.|+++||+||++ | +|.+|+. |||+.+++ |+.+-.++. |||..|+|-.+.-+|.+
T Consensus 775 llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi 851 (1051)
T KOG0210|consen 775 LLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI 851 (1051)
T ss_pred HHHHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHH
Confidence 99986 89999999999999999999999999 6 6766655 99999976 555555443 89999999999888876
Q ss_pred HHHHHHHHHHHHHHHh-hcCCCcH----HHHHHHHHHhcccccccccCCCCCC----CCCC---------chhHHHHHHH
Q 002430 656 SITIRIVLGFMLIALI-WKFDFSP----FMVLIIAILNDGTIMTISKDRVKPS----PQPD---------SWKLKEIFAT 717 (923)
Q Consensus 656 ~~ni~~~~~~~~~~~~-~~~~~~~----~~il~i~l~~d~~~~~l~~~~~~~~----~~p~---------~~~~~~~~~~ 717 (923)
-....+..+..++... +-.|.+- +++.+..+.+-.+..++-.|+.-.+ ..|+ ....+ -|..
T Consensus 852 HRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYK-tF~i 930 (1051)
T KOG0210|consen 852 HRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYK-TFFI 930 (1051)
T ss_pred hhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchh-hhhh
Confidence 6555444433333221 1111111 2333344444445566666654322 1122 22223 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccCccccCCCHHHHHHHHHHHHHHHHHHH-hhhhccCCCCcccchhHHHHHHH
Q 002430 718 GVVLGSYLAIMTVVFFWLMRKTDFFSDAFGVRSLRTRPDEMMAALYLQVSIISQAL-IFVTRSRSWSFIERPGLLLATAF 796 (923)
Q Consensus 718 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~f~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~ 796 (923)
++++++|++.+.+..+++.+.+.|+ ...++.|..+++..... ++.+++ |.| .++.+-
T Consensus 931 wvLISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~t--w~~------~m~vae 988 (1051)
T KOG0210|consen 931 WVLISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRT--WHW------LMVVAE 988 (1051)
T ss_pred hhhHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhh--hhH------HHHHHH
Confidence 5666888888877655555433321 22355666666666554 334444 322 333343
Q ss_pred HHHHHHHHHH----HHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchh
Q 002430 797 VIAQLVATFI----AVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDILKFGIRYILSGKAW 855 (923)
Q Consensus 797 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~ 855 (923)
++++.+..+. --|....| -.+|.+++.+.++.++..+|..+.|.++|++.|++.-
T Consensus 989 ~lsL~~Yivsl~~l~~yfd~~f----~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYa 1047 (1051)
T KOG0210|consen 989 LLSLALYIVSLAFLHEYFDRYF----ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYA 1047 (1051)
T ss_pred HHHHHHHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchh
Confidence 3333221111 11111111 2356666666777888888999999999999888743
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=6.3e-79 Score=716.46 Aligned_cols=475 Identities=36% Similarity=0.538 Sum_probs=417.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEE
Q 002430 105 IVLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182 (923)
Q Consensus 105 ~~~~~~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vd 182 (923)
+++++++..++.+++++++++.+.|++ ..+++++|+||| +++|++++|+|||+|.+++||.|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 356678889999999999999999998 788899999999 99999999999999999999999999999999 79999
Q ss_pred eccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 002430 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIG-NFCICSIAVGI 260 (923)
Q Consensus 183 es~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 260 (923)
||+|||||.|+.|.+|+.+++||.+.+|+..+.|+.+|.+|..+++..++.... .++++++..+++. .+++..++++.
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998775 4788899999998 55444433323
Q ss_pred HHHHHHHHhcccc--chHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCc
Q 002430 261 VAEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 338 (923)
Q Consensus 261 ~~~~~~~~~~~~~--~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGT 338 (923)
++.++.++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3222222222112 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEEEe
Q 002430 339 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYID 418 (923)
Q Consensus 339 LT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~ 418 (923)
||+|+|+|.++... . + ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987642 1 0 123459999999987642 123567999999999998875
Q ss_pred cCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccH
Q 002430 419 SDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDS 498 (923)
Q Consensus 419 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~ 498 (923)
.++ .++||+++.+.+.|.. +.+.+++++.+|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 3344556888999999999876 7999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHH
Q 002430 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIV 578 (923)
Q Consensus 499 ~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV 578 (923)
+++|+.|+++|++++|+|||+..+|..+|+++|| +||++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 6889999999999
Q ss_pred HHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 002430 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 658 (923)
Q Consensus 579 ~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 658 (923)
+.+|+.|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002430 659 IRIVLGFML 667 (923)
Q Consensus 659 i~~~~~~~~ 667 (923)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 875554443
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.5e-76 Score=702.70 Aligned_cols=517 Identities=26% Similarity=0.371 Sum_probs=436.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCC-eEEEEeCCCCCC
Q 002430 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVP 155 (923)
Q Consensus 77 ~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg-~~~~i~~~~Lv~ 155 (923)
++.++++++++++ .|.++.+|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 4456667777776 89999999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc
Q 002430 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (923)
Q Consensus 156 GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (923)
||+|.+++||.|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+|++.++++.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999999776
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 236 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 236 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
.+++++++.+++++.+++..++++.++.+++++. .... .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 5789999999999988766555544443333332 2222 78889999999999999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCC--hHHHHHHHHHHccccCcchHHHHHHHhcCChhh
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKE 392 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~ 392 (923)
++|+++++|+||++|++|||||||||+|+|+|.++... .+.+ +++++.+++..+.. ..||++.|++.++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999987631 2233 66777776655544 459999999988743210
Q ss_pred hhcCce-eEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecC
Q 002430 393 ARAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIP 471 (923)
Q Consensus 393 ~~~~~~-~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~ 471 (923)
.... + ..+++| .+..... .+|. ..+..|+++.+ + .. ..+ ....++.+++++++|+|+++++.+.
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~-~~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LA-AEP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hc-CCC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 1122221 2342 34567888876 2 11 111 1223455677889999999999754
Q ss_pred CCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCC-CEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccc
Q 002430 472 EKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (923)
Q Consensus 472 ~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 550 (923)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++..+++++|+..
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------- 426 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------- 426 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------
Confidence 899999999999999999999999999 9999999999999999999999832
Q ss_pred cCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCc
Q 002430 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 630 (923)
Q Consensus 551 ~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~ 630 (923)
+|+++.|++|.++++.+|+.++.|+|+|||.||+||+++|||||++|++++.++++||+++.++++
T Consensus 427 --------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 427 --------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred --------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 631 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 664 (923)
Q Consensus 631 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 664 (923)
+.++.++++||++++||++++.|++.+|+..+..
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999865543
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.1e-76 Score=699.59 Aligned_cols=499 Identities=30% Similarity=0.414 Sum_probs=428.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCC
Q 002430 76 WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVP 155 (923)
Q Consensus 76 ~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~ 155 (923)
.++.++++++++++ +|.++.+|+++++++..+++++++|+++.+++|++..+++++|+|||+++++++++|+|
T Consensus 3 ~l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 3 LLMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCC
Confidence 34566778888876 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc
Q 002430 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (923)
Q Consensus 156 GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~ 235 (923)
||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+||+.++++..
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~ 154 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA 154 (536)
T ss_pred CCEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999999999999999999999999999999999999999999876
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCc
Q 002430 236 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (923)
Q Consensus 236 -~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~i 314 (923)
.+++++|+.+++++++++..++++.++.+++++... .+..++..++++++++|||+||+++++++..+..+++++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gi 232 (536)
T TIGR01512 155 QSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGI 232 (536)
T ss_pred hhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCe
Confidence 478899999999998877666554444444333222 23337888999999999999999999999999999999999
Q ss_pred eeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhh
Q 002430 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEAR 394 (923)
Q Consensus 315 lvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~ 394 (923)
++|+++++|++|+++++|||||||||+|+|++.++.. .+++.+++..+. ...||++.|+++++.+..
T Consensus 233 lik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~--- 299 (536)
T TIGR01512 233 LIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE--- 299 (536)
T ss_pred EEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC---
Confidence 9999999999999999999999999999999987642 256777665443 445999999998764321
Q ss_pred cCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCC
Q 002430 395 AGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474 (923)
Q Consensus 395 ~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~ 474 (923)
.....+.+|. +.... ..+|+. +..|+++.+.+.. .+.+..+|.+++.++.+.
T Consensus 300 -~~~~~~~~~g----~gi~~---~~~g~~--~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~----- 351 (536)
T TIGR01512 300 -NVESVEEVPG----EGVRA---VVDGGE--VRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG----- 351 (536)
T ss_pred -CCcceEEecC----CeEEE---EECCeE--EEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC-----
Confidence 1222222221 11111 124543 4468887653311 014566788888877543
Q ss_pred CCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC-EEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCc
Q 002430 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 553 (923)
Q Consensus 475 ~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~ 553 (923)
+++|.+.++|++|||++++|++|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 352 --------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~------------------- 404 (536)
T TIGR01512 352 --------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE------------------- 404 (536)
T ss_pred --------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-------------------
Confidence 8999999999999999999999999999 999999999999999999999842
Q ss_pred chHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec-cchHHHhhccCEEecCCCchh
Q 002430 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 554 ~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg-~gtd~A~~aADivl~~~~~~~ 632 (923)
+|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| +|++.++++||+++.+++++.
T Consensus 405 -----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred -----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 48889999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 002430 633 IISAVLTSRAIFQRMKNYTIYAVSITIRIVL 663 (923)
Q Consensus 633 i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 663 (923)
+.+++.+||++++|+++++.|++.+|+..+.
T Consensus 474 l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 474 LPQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999975444
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.1e-76 Score=695.32 Aligned_cols=506 Identities=26% Similarity=0.386 Sum_probs=424.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC-CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~ 175 (923)
+|....+++++++++..++.+.++|+++++++|++..|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455666677778888889889999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHH
Q 002430 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 254 (923)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~ 254 (923)
| .+.||||+|||||.|+.|++||.+|+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 5799999999999999999999999999999999999999999999999999999877 4789999999999988766
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEec
Q 002430 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (923)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~D 334 (923)
.+++..++.+ +.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~-~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITF-VIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHH-HHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 5554333322 222 24788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEE
Q 002430 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (923)
Q Consensus 335 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv 414 (923)
||||||+|+|++.++.. . .+.++++++.+++..+...+ ||++.|++.++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~--~-~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV--F-GDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec--C-CCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998753 2 24566788888776665544 9999999987642211001111222222 122222
Q ss_pred EEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCC
Q 002430 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (923)
Q Consensus 415 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~l 494 (923)
. .+| ..+..|+++.+.+... . +.++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 2 245 3467799998643211 1 112456899999888754 899999999999
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhH
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 574 (923)
|||++++|++|++.|++++|+|||+..++..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHH
Q 002430 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (923)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 654 (923)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.++++..++.+++.||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcHH
Q 002430 655 VSITIRIVLGFMLIALIWKFDFSPF 679 (923)
Q Consensus 655 ~~~ni~~~~~~~~~~~~~~~~~~~~ 679 (923)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655444444444445553
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=7e-75 Score=717.90 Aligned_cols=520 Identities=24% Similarity=0.311 Sum_probs=436.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC
Q 002430 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178 (923)
Q Consensus 99 ~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~ 178 (923)
..+.++++++.+...++.+.+.|+.+++++|+++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++| .
T Consensus 287 ~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g-~ 365 (834)
T PRK10671 287 EASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-E 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc-e
Confidence 446778888899999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred eEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhcc-CCCCcHHHHHHHHHHHHHHHHH
Q 002430 179 LKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIA 257 (923)
Q Consensus 179 ~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~ 257 (923)
+.||||+|||||.|+.|++||.+|+||.+.+|.+.++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.+++
T Consensus 366 ~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~ 445 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVV 445 (834)
T ss_pred EEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999877 4788999999999988766555
Q ss_pred HHHHHHHHHHHhccc-cchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCC
Q 002430 258 VGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 336 (923)
Q Consensus 258 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKT 336 (923)
++.++.+++++.... ..+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+++++|++|||||
T Consensus 446 ~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKT 525 (834)
T PRK10671 446 VIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKT 525 (834)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCC
Confidence 434333333332211 1255678889999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCCCCcceEEEE
Q 002430 337 GTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTY 416 (923)
Q Consensus 337 GTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sv~~ 416 (923)
||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.+.. .... .+|.....+ .+..
T Consensus 526 GTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~-Gv~~ 593 (834)
T PRK10671 526 GTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDMT--LPQV-----NGFRTLRGL-GVSG 593 (834)
T ss_pred CccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhCC--CCCc-----ccceEecce-EEEE
Confidence 999999999987652 22456777787777666544 4999999988764210 0111 122222211 1111
Q ss_pred EecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCc
Q 002430 417 IDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRH 496 (923)
Q Consensus 417 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~ 496 (923)
..+|+ .+.+|+++.+.+... ..+.+.+.++++.++|.+++.++++. +++|++.+.|++||
T Consensus 594 -~~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r~ 653 (834)
T PRK10671 594 -EAEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRS 653 (834)
T ss_pred -EECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcchh
Confidence 12554 456799998754221 12345666778889999999999865 79999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHH
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYE 576 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~ 576 (923)
|++++|++|++.|+++.|+|||+..+|..+++++||.. +|+++.|++|.+
T Consensus 654 ~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~K~~ 703 (834)
T PRK10671 654 DSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDGKAE 703 (834)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHHHHH
Confidence 99999999999999999999999999999999999842 589999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHH
Q 002430 577 IVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 656 (923)
Q Consensus 577 iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 656 (923)
+++.+|++++.|+|+|||.||+|||++||+||+||+|++.++++||++++++++..|+.++++||+++++|++|+.|++.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~ 783 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFI 783 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hcCCCcHHHH
Q 002430 657 ITIRIVLGFMLIALI-WKFDFSPFMV 681 (923)
Q Consensus 657 ~ni~~~~~~~~~~~~-~~~~~~~~~i 681 (923)
+|+..+...++.+.. +++.++|+.-
T Consensus 784 yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 784 YNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred HHHHHHHHHHhchhhhhhcccCHHHH
Confidence 998665544322211 2334666543
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-74 Score=642.05 Aligned_cols=571 Identities=25% Similarity=0.300 Sum_probs=428.9
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCchhh
Q 002430 22 IPIEEVFEQLKCSREGLTS-DEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQD 100 (923)
Q Consensus 22 ~~~~~~~~~l~~~~~GLs~-~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~ 100 (923)
.+.++.+..++. .+|++. +|++.-.++||.|+.....+++-..|.+.-..|+ ++|.+..+..|.+. .+|+.
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 344443333332 256663 4444555569999999999999889999999999 66666666667764 47887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeC---CCeeccceEEEecC
Q 002430 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGD 177 (923)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~---Gd~IPaD~~ll~g~ 177 (923)
.+.-+++++..-.--..|+.+.-+.... +...+..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7776666555444344455544433332 2334567899999999999999999999999987 6789999999999
Q ss_pred CeEEEeccccCCCcceecCCC-----------------Ccccccceeec-------------CeEEEEEEEecchhhHHh
Q 002430 178 PLKIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 227 (923)
Q Consensus 178 ~~~Vdes~LTGEs~pv~K~~~-----------------~~v~~Gt~v~~-------------G~~~~~V~~tG~~T~~g~ 227 (923)
+|.|||++|||||.|..|.+- ..+|.||.+++ |-+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 689999999999999999762 36899999876 569999999999999998
Q ss_pred HHhhhhc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cchHHHHHHHHHHHHhhccCchhHHHHH
Q 002430 228 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSV 300 (923)
Q Consensus 228 i~~l~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~lli~~iP~~L~~~~~~ 300 (923)
+.+.+-- +++.+.-.+ +.+ .++..+++ ++....+|.+.. ++-...+.-+..++...+|..||+-+++
T Consensus 378 LvRtilf~aervTaNn~--Etf--~FILFLlV--FAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNR--ETF--IFILFLLV--FAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred eeeeEEecceeeeeccH--HHH--HHHHHHHH--HHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH
Confidence 8775543 233221111 111 11111111 111122332221 1222345566777888999999999999
Q ss_pred HHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecc-------cCCChHHHHHHHHHHccc
Q 002430 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-------KGVEKEHVILLAARASRT 373 (923)
Q Consensus 301 ~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-------~~~~~~~~l~~a~~~~~~ 373 (923)
+.-.+...|+|.+++|..+-.+.-.|+||+.|||||||||+..|.|..+.-.... ...+.+.+..+|++++..
T Consensus 452 AVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 452 AVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999875421001 011234555666665432
Q ss_pred -----cCcchHHHHHHHhcCChhh----------hhcCceeEEeecCCCCCcceEEEEEecC----CcEEEEEcCcHHHH
Q 002430 374 -----ENQDAIDAAIVGMLADPKE----------ARAGVREVHFLPFNPVDKRTALTYIDSD----GNWHRASKGAPEQI 434 (923)
Q Consensus 374 -----~~~~~~~~ai~~~~~~~~~----------~~~~~~~l~~~~F~s~~k~~sv~~~~~~----g~~~~~~KGa~e~i 434 (923)
-.+||++.|.+..++..-+ ...+.++.+.+.|.|.-|||+++..... -+++..+|||||+|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 2469999999988743211 1124677888999999999999876321 36889999999999
Q ss_pred HHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCC--------CCCCCCCCCceEEEEeccCCCCCccHHHHHHHHH
Q 002430 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRAL 506 (923)
Q Consensus 435 l~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~--------~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~ 506 (923)
.++.. ++++.+++...+++++|.||||++||+++. -.+++.|++|+|.|++.|.-|+|+|++++|+.|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 99876 567788888999999999999999999873 2367899999999999999999999999999999
Q ss_pred hCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCc---------------------------------------ccCccc
Q 002430 507 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS---------------------------------------LLGQDK 547 (923)
Q Consensus 507 ~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~---------------------------------------l~~~~~ 547 (923)
+.+.+|+||||||+.||.++|+++||..+..+.-. ++|...
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 99999999999999999999999999654110000 011111
Q ss_pred ccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 548 ~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
+.-...+.+.+++.++.||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+-
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 1111122455667788899999999999999999999999999999999999999999999984
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-63 Score=538.03 Aligned_cols=520 Identities=25% Similarity=0.371 Sum_probs=404.7
Q ss_pred HhhchHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcC-CCcEEE
Q 002430 69 FMWNPLSWVMEAAAIMAIALA----NGGGRDPDWQDFVGIIVLLVINSTI----SFIEENNAGNAAAALMANL-APKTKV 139 (923)
Q Consensus 69 ~~~~~~~~~l~~~ail~~~l~----~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~e~~~~~~~~~l~~~~-~~~~~V 139 (923)
+.+||..++-++.++++.++. .-++...++.....|.+++.+..++ +.+.|-|.+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888888777777776322 1111112333333344444444443 4445555555556666533 335677
Q ss_pred EeC-CeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCC---CcccccceeecCeEEEE
Q 002430 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (923)
Q Consensus 140 ~Rd-g~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~---~~v~~Gt~v~~G~~~~~ 215 (923)
+++ |.++.+++.+|+.||+|.++.||.||+||.++|| ..+||||++||||-||.|.+| +.+-.||.+.+..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 8999999999999999999999999999999999 579999999999999999998 67999999999999999
Q ss_pred EEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccchHHHHHHHHHHHHhhccC
Q 002430 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQ--HRKYRDGIDNLLVLLIGGIPI 292 (923)
Q Consensus 216 V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~lli~~iP~ 292 (923)
+++.-.+|++.|+..+++.++ +++|-+-.++-+..-+ .+++++ .....|.+. ...-...+...++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~L---TliFL~-~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGL---TLIFLL-AVATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHH---HHHHHH-HHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 999999999999999998874 6666444333321111 111111 111122111 101113456778899999999
Q ss_pred chhHHHHHHHHHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHcc
Q 002430 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (923)
Q Consensus 293 ~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~ 372 (923)
...--++-.-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|.=.-.++.. ..+.+.+++...+..++.
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhh
Confidence 88887877777899999999999999999999999999999999999998766555542 457888888887777665
Q ss_pred ccCcchHHHHHHHhcCChh-hhh-cCce-eEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccCCh-hHHHHH
Q 002430 373 TENQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKV 448 (923)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 448 (923)
..+ .|...+++..+.... +.+ +... ..+++||+.+.+++.+-. +++ ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 433 555566665543211 111 1111 357899998876655432 233 5788999999999876433 367888
Q ss_pred HHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH
Q 002430 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR 528 (923)
Q Consensus 449 ~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~ 528 (923)
++..++-++.|-..|+++... +++|++.++|-++||.+|-+.+||+.|||.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 999999999999999999866 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee
Q 002430 529 RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 529 ~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
+.|.++ ..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999853 37899999999999999999999999999999999999999999
Q ss_pred EeccchHHHhhccCEEecCCCchhHHHHHHHhHHHH
Q 002430 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644 (923)
Q Consensus 609 amg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~ 644 (923)
||.+||++||||+.+|=+|.|-..+++.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.1e-35 Score=315.13 Aligned_cols=222 Identities=36% Similarity=0.508 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-EEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEE
Q 002430 103 GIIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 181 (923)
Q Consensus 103 ~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~V 181 (923)
+|+++++++..+++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||.+||||++++.+.+.|
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~v 80 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccc
Confidence 3677888899999999999999999999988887 999999999999999999999999999999999999999337999
Q ss_pred EeccccCCCcceecC-----CCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccC-CCCcHHHHHHHHHHHHHHH
Q 002430 182 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (923)
Q Consensus 182 des~LTGEs~pv~K~-----~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~-~~~~~~~~~~~i~~~~~~~ 255 (923)
|||.||||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+...... +++++++.++++..+++.+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999987765 5689999999999887655
Q ss_pred HHHHHHHHHHHHHh-ccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhhhcCCceeccCchhhh
Q 002430 256 IAVGIVAEIIIMYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (923)
Q Consensus 256 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~E~ 324 (923)
++++.++.+++.+. ....++...+..++++++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 55444433332222 2456778889999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=1.8e-26 Score=241.61 Aligned_cols=211 Identities=32% Similarity=0.414 Sum_probs=151.4
Q ss_pred ceEEEecCCCccccCcceeeeeeeeecccCCChHHHHHHHHHHccccCcchHHHHHHHhcCChhhhhcCceeEEeecCCC
Q 002430 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (923)
Q Consensus 328 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~F~s 407 (923)
|++||||||||||+|+|.+ . . .+...++..+....... .||+..++..+....... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s-~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGS-EHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTS-TSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcC-CCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 6899999999999999999 1 1 34455565555444433 499999988876543221 11 112222
Q ss_pred CCcceEEEEEecCCcEEEEEcCcHHHHHHhccCChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEE
Q 002430 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (923)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~ 487 (923)
...++..... ++. +. |+++.+.+..... . ...........+|...+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--I--SPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--c--ccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 2222221111 222 22 8888877654321 1 111122223445555665554 3489999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
+.+.|++|||++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999832 23799
Q ss_pred ec--ChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCC
Q 002430 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (923)
Q Consensus 568 r~--sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~Ad 605 (923)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.61 E-value=3.4e-15 Score=135.24 Aligned_cols=123 Identities=26% Similarity=0.394 Sum_probs=106.9
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002430 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (923)
Q Consensus 483 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 562 (923)
...+.++---++=++++++|++|++. ++|.+.|||...+-...|.-.||+.+
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 45677777778889999999999999 99999999999999999999998642
Q ss_pred cCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-c--cchHHHhhccCEEecCCCchhHHHH
Q 002430 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 563 ~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g--~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
++||..-|+.|.++++.|++++++|.|+|||+||.+||++||+||.. + +..+-+.++||+++-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 47999999999999999999999999999999999999999999987 4 4566678999999853 4444443
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.41 E-value=4.9e-13 Score=113.15 Aligned_cols=67 Identities=37% Similarity=0.553 Sum_probs=61.4
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCc-ccccHHHHHHHHhhchHHHHHHHHHHHH
Q 002430 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNPLSWVMEAAAIMA 85 (923)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~-~~~~~~~~~l~~~~~~~~~~l~~~ail~ 85 (923)
||.++.+++++.|+++ .+|||++||++|+++||+|++++ ++.++|..|+++|++|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999965 88999999999999999999965 4578899999999999999999999986
No 38
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.23 E-value=4.8e-09 Score=118.00 Aligned_cols=209 Identities=18% Similarity=0.210 Sum_probs=143.0
Q ss_pred CceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-----------CCCcc-------
Q 002430 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----------PSSSL------- 542 (923)
Q Consensus 481 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-----------~~~~l------- 542 (923)
+-.|.|++...-++|++....|+.|-++-|+.+-.+-.+....+-.|.++||..... |....
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 347899999999999999999999999999999999999999999999999954211 11000
Q ss_pred cCc---------------cccc---------------ccC--------cchHHHH-----------------hhhcCeEE
Q 002430 543 LGQ---------------DKDA---------------SIA--------ALPVDEL-----------------IEKADGFA 567 (923)
Q Consensus 543 ~~~---------------~~~~---------------~~~--------~~~~~~~-----------------~~~~~vfa 567 (923)
.++ .+.. .++ +.+..++ -.-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 000 0000 000 0001110 00122588
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCh--HhhhcCCeeeEecc-------------chHH-HhhccC---------
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDA-ARSASD--------- 622 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDa--paLk~AdVGIamg~-------------gtd~-A~~aAD--------- 622 (923)
.++|+.--++++.+|++|++|+.+|.-.|-. --.-+|||+|++.. ++.. -.+|+|
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 9999999999999999999999999999844 34468999999842 1111 011233
Q ss_pred --------EEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcHHHHHHHHHHhc
Q 002430 623 --------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-IALIWKFDFSPFMVLIIAILND 689 (923)
Q Consensus 623 --------ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~-~~~~~~~~~~~~~il~i~l~~d 689 (923)
+-+-...+-+|..+|+..|....-+|+.++|.+.......+..+. .+++.+..|+--+++|...|--
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 223233345678888899999999999999998887755554444 4445566677777777776653
No 39
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.22 E-value=2e-10 Score=117.20 Aligned_cols=166 Identities=16% Similarity=0.178 Sum_probs=112.2
Q ss_pred cCCCcHHHHHHHHHHhccc-ccccccCCCCCC-----CCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 002430 673 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----PQP--DSWKLKEIFATGVVLGSYLAIMTVVFFWLMRKTDFFSD 744 (923)
Q Consensus 673 ~~~~~~~~il~i~l~~d~~-~~~l~~~~~~~~-----~~p--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 744 (923)
|.|++|+|+||+|+++|.+ ++++++|+++++ |++ ++.-.++.+...+..|+++++++++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999987 799999998764 221 122235567777888999999999888776541
Q ss_pred ccCccc--cCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002430 745 AFGVRS--LRTRPDEMMAALYLQVSIISQALIFVTRSRSWSFIE----RPGLLLATAFVIAQLVATFIAVYAN--WSFAR 816 (923)
Q Consensus 745 ~~g~~~--~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 816 (923)
+|.+. ...+..+.+|+.|+.+++++.++.+++|+.+...+. +.+++++.+++++.++..++ +|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 22211 111345689999999999999999999996532211 23456777777666554433 4543 22345
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002430 817 IEGCGWGWAGVIWLYSLVTYFPLDILKFG 845 (923)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 845 (923)
+.+.++..|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 66778877888899999999999999974
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.10 E-value=1.6e-10 Score=96.26 Aligned_cols=60 Identities=42% Similarity=0.689 Sum_probs=53.9
Q ss_pred HcCCCC-CCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHhhchHHHHHHHHHHHHHHHh
Q 002430 30 QLKCSR-EGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALA 89 (923)
Q Consensus 30 ~l~~~~-~GLs~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~ 89 (923)
.|+++. +|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++|+++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 366774 499999999999999999998876 788999999999999999999999999864
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.92 E-value=6.3e-09 Score=107.67 Aligned_cols=131 Identities=15% Similarity=0.110 Sum_probs=97.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..- +........ ....++. --..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~--~g~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDD--SDRVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEec--CCeeECe------------eecCcc
Confidence 57999999999999975 9999999999999999999998632 111111000 0000110 114588
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHh
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~g 640 (923)
+|..+++.+++.|..+.|+|||.||.||++.|++||++.....+.+.+-|+-.. .+++.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998666666655555444 4577777777654
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.85 E-value=1e-08 Score=113.26 Aligned_cols=131 Identities=21% Similarity=0.274 Sum_probs=97.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+..... ..+.- .+..+.+.... + -+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei--~dg~ltg~v~g------~---iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEI--MDGKLTGNVLG------D---IVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEE--ECCEEEeEecC------c---cCCcc
Confidence 478999999999999999999999999888889999999853110 00000 00000000000 0 02346
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++...++..++..+
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 899988888654 3 5699999999999999999999999 78888999999999988988887665
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.85 E-value=1.1e-08 Score=107.66 Aligned_cols=129 Identities=21% Similarity=0.284 Sum_probs=93.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe-cCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~sP 571 (923)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- +....... +....+ .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998531 11100000 000000 00111 123
Q ss_pred hhHHHHHHHHhhCC----CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHH
Q 002430 572 EHKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 572 ~~K~~iV~~lq~~g----~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
..|..+++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35889999999999999999999985 467788899999999999887653
No 44
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.81 E-value=8.9e-09 Score=92.02 Aligned_cols=65 Identities=32% Similarity=0.470 Sum_probs=54.2
Q ss_pred CcchHHHHHHHhcC------ChhhhhcCceeEEeecCCCCCcceEEEEEecCCcEEEEEcCcHHHHHHhccC
Q 002430 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC 440 (923)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~l~~~~F~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 440 (923)
.++|.|.|++.++. +....+..+++++.+||+|++|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 45899999988763 24567788999999999999999999998 3345777999999999999973
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.67 E-value=1.9e-07 Score=98.91 Aligned_cols=153 Identities=24% Similarity=0.295 Sum_probs=103.6
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-CC-Ccc-c---Ccc------------
Q 002430 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PS-SSL-L---GQD------------ 546 (923)
Q Consensus 486 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~~-~~l-~---~~~------------ 546 (923)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+++|+..... .. ..+ . +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33443444 67899999999999999999999999999999999999853110 00 000 0 000
Q ss_pred -----------------cccc--------cCc---chHHHHhhhcC--e-------EEecChhh--HHHHHHHHhhC-C-
Q 002430 547 -----------------KDAS--------IAA---LPVDELIEKAD--G-------FAGVFPEH--KYEIVKRLQER-K- 585 (923)
Q Consensus 547 -----------------~~~~--------~~~---~~~~~~~~~~~--v-------far~sP~~--K~~iV~~lq~~-g- 585 (923)
.+.. ... +++.+.+++.. + +..+.|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 0000 000 11222222211 1 22344443 77777777653 2
Q ss_pred --CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 586 --HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 586 --~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.-+.++||+.||.+|++.|++|+||+++.+..|++||+|..+++=..+..+++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 45899999999999999999999999999999999999998777777777764
No 46
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.66 E-value=9.9e-08 Score=95.40 Aligned_cols=100 Identities=19% Similarity=0.268 Sum_probs=79.9
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec--ChhhHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV--FPEHKYEI 577 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~--sP~~K~~i 577 (923)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 689999999999999999999999999999998521 1111 23333444
Q ss_pred HHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC
Q 002430 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (923)
Q Consensus 578 V~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~ 629 (923)
++.++-...-|+|+||+.||.+|++.|++++||+++.+..+.+||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444333456999999999999999999999999999999999999986544
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.65 E-value=1.1e-07 Score=99.82 Aligned_cols=143 Identities=20% Similarity=0.261 Sum_probs=97.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-C-CCcccCc-c-------ccc-------------
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-P-SSSLLGQ-D-------KDA------------- 549 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~-~~~l~~~-~-------~~~------------- 549 (923)
++.+++.++|++|++.|+++.+.||.....+..+++++++..... . ...+... . ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999853211 0 0000000 0 000
Q ss_pred --------------ccCc---chHHHHhhhcC--e-----EEecCh--hhHHHHHHHHhhC-C---CEEEEEcCCccChH
Q 002430 550 --------------SIAA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVKRLQER-K---HICGMTGDGVNDAP 599 (923)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~--v-----far~sP--~~K~~iV~~lq~~-g---~~V~m~GDG~NDap 599 (923)
..+. +.+.+.+.+.. + +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 11122222211 1 122333 4788888887653 3 34899999999999
Q ss_pred hhhcCCeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 600 aLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
|++.|+.|+||+++.+.+|+.||+|..+++-..+..
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~ 213 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVE 213 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhh
Confidence 999999999999999999999999987655545443
No 48
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.62 E-value=1e-07 Score=94.29 Aligned_cols=105 Identities=26% Similarity=0.381 Sum_probs=81.4
Q ss_pred HHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHH
Q 002430 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (923)
Q Consensus 501 ~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~ 580 (923)
+|++|++.|+++.++||+....+..+.+++|+..- |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998531 1111 234444444
Q ss_pred Hhh----CCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC----chhHHHHH
Q 002430 581 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAV 637 (923)
Q Consensus 581 lq~----~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~----~~~i~~~i 637 (923)
+.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+. |..+.+.+
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 332 3456999999999999999999999999888889999999997553 44444443
No 49
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.58 E-value=4.8e-07 Score=98.06 Aligned_cols=154 Identities=23% Similarity=0.236 Sum_probs=107.0
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC---------CCCcc-------------
Q 002430 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---------PSSSL------------- 542 (923)
Q Consensus 486 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~---------~~~~l------------- 542 (923)
|.+.-.|. +.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ..+.+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444554 88999999999999999999999999999999999999964100 00000
Q ss_pred --------------cCcc------cc--------------------c----------ccCcchHHHHh---hh-----cC
Q 002430 543 --------------LGQD------KD--------------------A----------SIAALPVDELI---EK-----AD 564 (923)
Q Consensus 543 --------------~~~~------~~--------------------~----------~~~~~~~~~~~---~~-----~~ 564 (923)
.... .. . ....+.+.+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 00 0 00001111111 11 11
Q ss_pred eE-------EecCh--hhHHHHHHHHhhC-CCE---EEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCch
Q 002430 565 GF-------AGVFP--EHKYEIVKRLQER-KHI---CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (923)
Q Consensus 565 vf-------ar~sP--~~K~~iV~~lq~~-g~~---V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~ 631 (923)
.+ ..+.| .+|..-++.+.+. |.. |+++||+.||.+||+.|+.||||+++.+.+++.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 23333 3688888888763 543 99999999999999999999999999999999999888888888
Q ss_pred hHHHHHHH
Q 002430 632 VIISAVLT 639 (923)
Q Consensus 632 ~i~~~i~~ 639 (923)
.+..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 88888754
No 50
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.56 E-value=4.7e-07 Score=98.46 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=54.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.|..-++.|.+. | .-|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++=..+..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 466666655543 2 45899999999999999999999999999999999999998777777777764
No 51
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.55 E-value=2.6e-07 Score=96.12 Aligned_cols=118 Identities=20% Similarity=0.188 Sum_probs=84.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe-cC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~s 570 (923)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...... .+...+ ...++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~d--G~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDD--GKLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeC--CEEec----------eeeeeecC
Confidence 67899999999999999999999999999999999999999653211 110000 00111 12333 34
Q ss_pred hhhHHHHHHHHhhC-CC---EEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEE
Q 002430 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (923)
Q Consensus 571 P~~K~~iV~~lq~~-g~---~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADiv 624 (923)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++.......+ .|+..
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~-~a~~~ 198 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA-LADVR 198 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH-HHHHh
Confidence 57899888666653 54 48899999999999999999999974433333 44443
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.51 E-value=6.9e-07 Score=94.25 Aligned_cols=140 Identities=22% Similarity=0.303 Sum_probs=95.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC--CCCcc-cCc--------ccc-------------
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSSL-LGQ--------DKD------------- 548 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~~~--------~~~------------- 548 (923)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+ ... ...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643110 00000 000 000
Q ss_pred --c----c-------------cCcchHHHHhhhcC---------eEEecCh--hhHHHHHHHHhhC-C---CEEEEEcCC
Q 002430 549 --A----S-------------IAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER-K---HICGMTGDG 594 (923)
Q Consensus 549 --~----~-------------~~~~~~~~~~~~~~---------vfar~sP--~~K~~iV~~lq~~-g---~~V~m~GDG 594 (923)
. . .+.+.+.+++++.. .+..+.| ..|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 00011122222211 1223334 3788888877653 3 458999999
Q ss_pred ccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchh
Q 002430 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 595 ~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~ 632 (923)
.||.+|++.|++|+||+++.+..|+.||+|..+++-..
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 99999999999999999999999999999987666656
No 53
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.47 E-value=5.3e-07 Score=98.20 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCE--EecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADi--vl~~~~~~~i~~~i~ 638 (923)
.|..-++.|.+. | .-|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-..+..+++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777777654 3 35899999999999999999999999999999999996 666666667776663
No 54
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.46 E-value=8.6e-07 Score=92.14 Aligned_cols=127 Identities=20% Similarity=0.223 Sum_probs=90.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|+++ +++.++|+-....+..+.+++|+..- +.. .+...+.. ...+ +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~~-~~~~~~~~-~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FCH-SLEVDEDG-MITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hcc-eEEECCCC-eEEC------------ccccccc
Confidence 4689999999999999 99999999999999999999998531 111 11000000 0000 0012478
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCE-EecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADi-vl~~~~~~~i~~~i 637 (923)
.|...++.++..+..+.|+|||.||.+|.+.|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887544444455665 43 4566655444
No 55
>PRK10976 putative hydrolase; Provisional
Probab=98.44 E-value=9.3e-07 Score=95.91 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC--EEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD--ivl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+. | .-|+++|||-||.+||+.|+.|+||++|.+.+|++|| .|..+++=..+..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666665543 2 3489999999999999999999999999999999988 6776666667766663
No 56
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.42 E-value=1.1e-06 Score=89.65 Aligned_cols=108 Identities=23% Similarity=0.287 Sum_probs=82.1
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 579 (923)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999997421 11 1234545544
Q ss_pred HHh-hCC---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCC----CchhHHHHHHH
Q 002430 580 RLQ-ERK---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP----GLSVIISAVLT 639 (923)
Q Consensus 580 ~lq-~~g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~----~~~~i~~~i~~ 639 (923)
.+. +.| .-|+|+||+.||.+|++.|+++++++++.+..+..||+++-.+ .+..+.+.+..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 443 333 4699999999999999999999999888888888999998532 23444444433
No 57
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.40 E-value=9.9e-07 Score=91.20 Aligned_cols=117 Identities=26% Similarity=0.386 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+.. .+....... + .... +-+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~-~-~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFD-E-KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEc-C-CCeE----------ecceeeEEccc
Confidence 589999999999999999999999999999999999999743 111111100 0 0000 00122334577
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC
Q 002430 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (923)
Q Consensus 573 ~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD 622 (923)
.|..+++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788787776543 23589999999999999999999999755555666666
No 58
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.33 E-value=1.3e-06 Score=93.14 Aligned_cols=146 Identities=18% Similarity=0.229 Sum_probs=99.0
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCC-CCCccc---------------------------
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL--------------------------- 543 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~-~~~~l~--------------------------- 543 (923)
..+.+.+.++|++++++|+++.+.||.....+..+..++++..... ....+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4467899999999999999999999999999999999999852100 000000
Q ss_pred ---------------Ccc--ccc------------------------------ccCcchHHHH-------hhhcCe----
Q 002430 544 ---------------GQD--KDA------------------------------SIAALPVDEL-------IEKADG---- 565 (923)
Q Consensus 544 ---------------~~~--~~~------------------------------~~~~~~~~~~-------~~~~~v---- 565 (923)
... ... ..+.+.+.++ ......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 000 0001111111 111101
Q ss_pred ---EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHH
Q 002430 566 ---FAGVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 566 ---far~sP--~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~ 636 (923)
+-.++| ..|..-++.+.+. ...+.++||+.||.+||+.|+.|+||+++++..+..||++....+=..+.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 223444 5798888888753 3568899999999999999999999999999999999999987655666654
Q ss_pred H
Q 002430 637 V 637 (923)
Q Consensus 637 i 637 (923)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 3
No 59
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.33 E-value=3.5e-06 Score=88.30 Aligned_cols=135 Identities=13% Similarity=0.067 Sum_probs=86.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccC-cccccccCcchHHHHhhhcCeE--Ee
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG-QDKDASIAALPVDELIEKADGF--AG 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~vf--ar 568 (923)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+......+ .......+ ....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p---------~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWP---------HPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCC---------CCCcccccc
Confidence 46899999999999999999999999999888888888754332221111111 10000000 00000 00
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHh--hccCEEecCCCchhHHHHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~--~aADivl~~~~~~~i~~~i 637 (923)
-....|..+++.++.....|.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 01357999999998887888999999999999999999777542111111 1122222 5677776665
No 60
>PRK08238 hypothetical protein; Validated
Probab=98.31 E-value=0.00014 Score=84.86 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=74.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
|++|++.+.++++++.|+++.++|+-+...+..+++++|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111111 1135677
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA 617 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A 617 (923)
.|.+.++.....+ -+.++||..||.|+++.|+-.++++.+...+
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~ 171 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVA 171 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHH
Confidence 7866544322222 2578999999999999999999998554443
No 61
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.30 E-value=3.3e-06 Score=91.84 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=54.0
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.++ | .-|+++||+.||.+|++.|++|+||+++.+..+++||++..+++=..+..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466655555432 3 35899999999999999999999999888888999999998877778877774
No 62
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.30 E-value=9.6e-07 Score=90.52 Aligned_cols=92 Identities=24% Similarity=0.297 Sum_probs=71.0
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh-h-
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE-H- 573 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~-~- 573 (923)
+++.+.|+.++++|++++++||+....+..+++.+|+.... +.+.+... -. +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~~---------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-NG---------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-TT---------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-cc---------cceeeeeECCCCCC
Confidence 88889999999999999999999999999999999996421 11111100 00 12246666666 5
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCccChHhhh
Q 002430 574 -KYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (923)
Q Consensus 574 -K~~iV~~l------q~~g~~V~m~GDG~NDapaLk 602 (923)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
No 63
>PLN02887 hydrolase family protein
Probab=98.29 E-value=3.1e-06 Score=100.22 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=47.5
Q ss_pred EEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHH
Q 002430 587 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 587 ~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~ 638 (923)
-|.++|||.||.+||+.|+.||||++|.+.+|++||+|..+++=..+..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4889999999999999999999999999999999999988777777777774
No 64
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.25 E-value=2.6e-06 Score=83.57 Aligned_cols=109 Identities=23% Similarity=0.223 Sum_probs=76.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+-|++++.++.||+.|.+|.++||--...+..+|.++||+........+.=. .+....+ ++.. -.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd-~~Gk~~g--fd~~------~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD-KDGKYLG--FDTN------EPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec-cCCcccc--cccC------CccccCCc
Confidence 4689999999999999999999999999999999999997532222221000 0000000 0000 00112357
Q ss_pred HHHHHHHHhhC--CCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 574 KYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 574 K~~iV~~lq~~--g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
|.+++..+++. -..++|+|||+||.+|+.-||-=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999985 457899999999999999977666654
No 65
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.22 E-value=5.9e-06 Score=89.11 Aligned_cols=63 Identities=24% Similarity=0.284 Sum_probs=53.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 573 ~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
.|..-++.+.+. | ..++++||+.||.+|++.|+.|+||+++.+..++.||++..+++-..+..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhh
Confidence 588888877664 2 46899999999999999999999999999999999999998766555544
No 66
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.14 E-value=1.8e-05 Score=85.30 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=51.1
Q ss_pred hHHHHHHHHhhC------CCEEEEEcCCccChHhhhcCCeeeEeccch---HHHhhc--c-CEEecCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~~------g~~V~m~GDG~NDapaLk~AdVGIamg~gt---d~A~~a--A-Divl~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+. ...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|...++-..+..+++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 566666655443 456999999999999999999999999887 467775 4 58777777777777764
No 67
>PLN02954 phosphoserine phosphatase
Probab=98.13 E-value=2e-05 Score=83.09 Aligned_cols=131 Identities=21% Similarity=0.290 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+........ +....+... .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~--~g~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGD--SGEYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcC--CCcEECccC------CCcc--cCC
Confidence 378999999999999999999999999999999999999863 22111000000 000000000 0000 112
Q ss_pred hhHHHHHHHHhhC-C-CEEEEEcCCccChHhhhc--CCeeeEeccc--hHHHhhccCEEecCCCchhHHH
Q 002430 572 EHKYEIVKRLQER-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g-~~V~m~GDG~NDapaLk~--AdVGIamg~g--td~A~~aADivl~~~~~~~i~~ 635 (923)
..|.+.++.+.++ | ..+.|+||+.||..|.+. ++++++.+.+ .+.....+|+++. ++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 4477777777654 2 468899999999999777 5776666532 2333456899984 4555544
No 68
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.07 E-value=1.3e-05 Score=81.70 Aligned_cols=113 Identities=16% Similarity=0.074 Sum_probs=75.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcch-HHHHhhhcCeEEe-c
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALP-VDELIEKADGFAG-V 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~vfar-~ 569 (923)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+... ++.. +.-...+..++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999999885321 0111 111100 0000 0000000001111 1
Q ss_pred ChhhHHHHHHHHhhC-CCEEEEEcCCccChHhhhcCCeeeE
Q 002430 570 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 570 sP~~K~~iV~~lq~~-g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
....|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
No 69
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.05 E-value=1.2e-05 Score=76.69 Aligned_cols=113 Identities=24% Similarity=0.401 Sum_probs=86.5
Q ss_pred HHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHH
Q 002430 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (923)
Q Consensus 500 ~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~ 579 (923)
-.|+.+.++||+|.+|||.+......-|+++||..- ..| -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~------~qG--------------------------~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL------YQG--------------------------ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee------eec--------------------------hHhHHHHHH
Confidence 478999999999999999999999999999998421 111 256766666
Q ss_pred HHhhC----CCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCC----chhHHHHHHHhHHHH
Q 002430 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIF 644 (923)
Q Consensus 580 ~lq~~----g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~----~~~i~~~i~~gR~~~ 644 (923)
.|.++ -.-|+++||-.||-|+|++...++|+.++..-.++.||+|+...+ +..+.+.|...+..+
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 55543 346899999999999999999999999998888999999986543 334444444444433
No 70
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.03 E-value=4.3e-05 Score=83.16 Aligned_cols=67 Identities=21% Similarity=0.150 Sum_probs=50.4
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCccChHhhhcCCeeeEeccch-H---H--HhhccCEEecCCCchhHHHHHHH
Q 002430 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-D---A--ARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 ~K~~iV~~lq~-------~g~~V~m~GDG~NDapaLk~AdVGIamg~gt-d---~--A~~aADivl~~~~~~~i~~~i~~ 639 (923)
.|..-++.|.+ ....|.++|||-||.+||+.|++||||+++. + + -+..+|++....+-..+..++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDH 266 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHH
Confidence 56666665544 2346899999999999999999999998443 2 1 34478999888877788877753
No 71
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.96 E-value=1.4e-05 Score=80.79 Aligned_cols=100 Identities=23% Similarity=0.278 Sum_probs=70.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
++|++.+.++.+++.|+++.++||.....+..+++.+|+.. .+... +... .+....+. ...-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~-~~~~-~~g~~~g~--------~~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANR-LEFD-DNGLLTGP--------IEGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeee-EEEC-CCCEEeCc--------cCCcccCCcch
Confidence 68999999999999999999999999999999999999853 11111 1000 00000000 00001245688
Q ss_pred HHHHHHHHhhC----CCEEEEEcCCccChHhhhcC
Q 002430 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (923)
Q Consensus 574 K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~A 604 (923)
|..+++.++++ ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34589999999999999876
No 72
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.96 E-value=7.6e-05 Score=81.32 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=50.3
Q ss_pred hHHHHHHHHhh----CC-CEEEEEcCCccChHhhhcCCeeeEeccchHHHh----hcc-CEEe--cCCCchhHHHHHH
Q 002430 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (923)
Q Consensus 573 ~K~~iV~~lq~----~g-~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~----~aA-Divl--~~~~~~~i~~~i~ 638 (923)
.|..-++.+.+ .. .-|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666665553 24 789999999999999999999999999999888 666 6666 3444556666653
No 73
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.95 E-value=3.9e-05 Score=80.67 Aligned_cols=133 Identities=12% Similarity=0.079 Sum_probs=83.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCC-CCCCC-cccCcccccccCcchHHHHhhhcCe--EEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSS-SLLGQDKDASIAALPVDELIEKADG--FAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~-~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v--far 568 (923)
+++||+.+.++.|++.|+++.++||-....+..+.+++ +... .+... ...+.......+. ... +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~---------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH---------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC---------Cccccccc
Confidence 58999999999999999999999999998899988887 6431 11000 0111100000000 000 000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHH--hhccCEEecCCCchhHHHHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA--RSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A--~~aADivl~~~~~~~i~~~i 637 (923)
-....|..+++.++.....|.|+|||.||.+|.+.||+.++-+.-.+.+ +.-+.+.+ ++|..+...+
T Consensus 144 ~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0013488899988877778999999999999999999977733111221 22233333 4566666655
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.84 E-value=8.9e-05 Score=78.13 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=87.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.||+.+.++.|++.|+++.++||........+.++.|+.... . .+.+.+. +.+..|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-S--VVIGGDS------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-c--EEEcCCC------------------CCCCCc
Confidence 458899999999999999999999999999999999999985321 1 1111100 111222
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEecc----chHHHhhccCEEecCCCchhHHHHHHH
Q 002430 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 572 --~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~----gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
+--..+.+.++.....+.|+||+.||+.|.+.|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 22234445555455678999999999999999999 666642 2344455788888 678888877654
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.83 E-value=4.5e-05 Score=79.01 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=77.0
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
..+++|++.+.|+.+++.|+++.++||-....+..+++.+|+.. .......... +....+... --.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~--~g~~~g~~~---------~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESE--DGIYTGNID---------GNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcC--CCEEeCCcc---------CCCCC
Confidence 34689999999999999999999999999999999999999853 1111111000 000000000 01234
Q ss_pred hhhHHHHHHHHhh-CCC---EEEEEcCCccChHhhhcCCeeeEec
Q 002430 571 PEHKYEIVKRLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 571 P~~K~~iV~~lq~-~g~---~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
++.|...++.+.+ .+. .+.++||+.||.|+++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6788887876654 342 6889999999999999999999886
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.71 E-value=7.7e-05 Score=71.00 Aligned_cols=118 Identities=15% Similarity=0.051 Sum_probs=77.0
Q ss_pred ccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 489 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ....+........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhh-cccccccccccccccCC
Confidence 34458999999999999999999999999999999999999987321 0111100000000 00000000111123345
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhc-CCeeeE
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK-ADIGIA 609 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~-AdVGIa 609 (923)
-.|+.+..+.+.++.....+.++||+.||..|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56667777777776666789999999999999998 554544
No 77
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.67 E-value=0.00022 Score=75.09 Aligned_cols=126 Identities=18% Similarity=0.208 Sum_probs=91.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
...+-|+++++++.|+++|++..++|++....+..+.+..|+..-. ..+.|.+.. -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCC----------------CCCCcC
Confidence 4567899999999999999999999999999999999999986431 111111100 011124
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCC---eeeEecc--chHHHhhccCEEecCCCchhHHHHH
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~Ad---VGIamg~--gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
|+......+.+....+.+.||||..||..|=|+|+ ||+..|. +.......+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55666666666555447999999999999999998 6666662 4566777799998 5566666554
No 78
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.58 E-value=0.00029 Score=73.21 Aligned_cols=124 Identities=18% Similarity=0.172 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++||.....+...-+..|+.... + ..+ +.+.. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~-~~~~~----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVI-GSDEV----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEE-ecCcC----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885311 0 111 10000 01111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-e--c--cchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--A--DATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-m--g--~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
-=..+++.++-....+.|+||+.+|..+-++|++... + | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2234444444345669999999999999999998643 3 3 22344567899988 4555665543
No 79
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.33 E-value=0.00091 Score=72.79 Aligned_cols=125 Identities=16% Similarity=0.160 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... + .+.+.+.. ....-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~--~i~~~d~~----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R--WIIGGDTL----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e--EEEecCCC----------------CCCCCCc
Confidence 468899999999999999999999999988888888888874311 0 11111000 0000111
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEecc----chHHHhhccCEEecCCCchhHHHHH
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~----gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
+-=..+.+.+.-....+.|+||+.||..|.++|++ .+++.. ..+.....+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11122333332234568999999999999999997 345432 2333455799988 4576666544
No 80
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.30 E-value=0.00091 Score=71.82 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=93.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCC--C-C-CCcc-cCc-c-c-----------------
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y-P-SSSL-LGQ-D-K----------------- 547 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~--~-~-~~~l-~~~-~-~----------------- 547 (923)
.+..|...++|+++++.|+.++..||-.....+.+.+++++.... . . ...+ ... . .
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456789999999999999999999999999999999988875420 0 0 0000 000 0 0
Q ss_pred ----------------cc-------ccCcch----H---HHHhhhc--Ce---EE-----ecCh--hhHHHHHHHHhhC-
Q 002430 548 ----------------DA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER- 584 (923)
Q Consensus 548 ----------------~~-------~~~~~~----~---~~~~~~~--~v---fa-----r~sP--~~K~~iV~~lq~~- 584 (923)
.. ....+. + .+.+.+. .+ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 000001 1 1111111 11 11 3344 4788888888664
Q ss_pred ---CCEEEEEcCCccChHhhhc-CCeeeEeccchHHHhhccC-------EEecCCCchhHHHHHH
Q 002430 585 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (923)
Q Consensus 585 ---g~~V~m~GDG~NDapaLk~-AdVGIamg~gtd~A~~aAD-------ivl~~~~~~~i~~~i~ 638 (923)
...|.++||+.||.+|++. ++.|++|+++.+..++.+| ++-....-..+..+++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 7799999998887775443 4333334455555553
No 81
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.30 E-value=0.00093 Score=70.52 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
.+..-+++.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555667999999999999999999999999999999999974
No 82
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.28 E-value=0.001 Score=69.55 Aligned_cols=124 Identities=18% Similarity=0.131 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+..-. .. +.+.+.. -...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~-i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DV-VITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eE-EEecCcC----------------CCCCCCcH
Confidence 36799999999999999999999999999999888999985321 11 1111100 00111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee---Eeccc--hHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI---AVADA--TDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI---amg~g--td~A~~aADivl~~~~~~~i~~~i 637 (923)
-=.++.+.++-....+.|+||..+|..|-++|++-. .-+.+ .+.....+|+++ +++..++..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 233444444434456899999999999999999843 22311 223445688887 4677776654
No 83
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.14 E-value=0.0013 Score=68.57 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh-
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 571 (923)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... + .+.+.+. ..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~--~~~~~~~------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S--VLIGGDS------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c--EEEecCC------------------CCCCCCC
Confidence 57899999999999999999999999999999999999985321 1 1111110 011122
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-ccc----hHHHhhccCEEecCCCchhHH
Q 002430 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA----TDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 572 -~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g~g----td~A~~aADivl~~~~~~~i~ 634 (923)
+-=....+.+.-....+.|+||..||..|.++|++-... ..| .......+|+++ +++..+.
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~ 210 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELP 210 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHH
Confidence 111222333332335689999999999999999986543 221 123334688887 4455544
No 84
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.12 E-value=0.00051 Score=73.08 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=54.3
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccC----EEecCCCchhHHHHHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 638 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aAD----ivl~~~~~~~i~~~i~ 638 (923)
..|...++.+.++ | .-|+++||+.||.+|++.|+.||+|+++.+..++.|| +|...++=..+..++.
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3788888887654 3 2478999999999999999999999999999999999 7765555556777664
No 85
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.05 E-value=0.0039 Score=67.54 Aligned_cols=131 Identities=11% Similarity=0.112 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHHh-CCCEEEEEccCChHHHHHHHHHhCCC--C-C---CC--CCC----ccc----------------
Q 002430 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY--PSS----SLL---------------- 543 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~tA~~ia~~~Gi~--~-~---~~--~~~----~l~---------------- 543 (923)
.+-+++.++|++|++ .|+.++++||..........+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999888887766641 1 1 00 000 000
Q ss_pred ---Ccccc----------cccC--cchHHHHh----hhcC--------eEEecChh--hHHHHHHHHhhC----CCEEEE
Q 002430 544 ---GQDKD----------ASIA--ALPVDELI----EKAD--------GFAGVFPE--HKYEIVKRLQER----KHICGM 590 (923)
Q Consensus 544 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------vfar~sP~--~K~~iV~~lq~~----g~~V~m 590 (923)
|...+ ...+ .+.+.++. +... .+-.+.|. +|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0000 01111111 1111 12334443 788888776543 356889
Q ss_pred EcCCccChHhhhcC----CeeeEeccchHHHhhccCEEecC
Q 002430 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTE 627 (923)
Q Consensus 591 ~GDG~NDapaLk~A----dVGIamg~gtd~A~~aADivl~~ 627 (923)
+||+.||.+|++.+ +.||+||++. ..|++.|.+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~ 232 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG 232 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC
Confidence 99999999999999 9999999764 457788754
No 86
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.05 E-value=0.0038 Score=65.63 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.5
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
+.+.++|+++++.|+++.++||-....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.91 E-value=0.0086 Score=64.46 Aligned_cols=132 Identities=11% Similarity=0.077 Sum_probs=83.4
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe---
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--- 568 (923)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... .+......-.-+ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~---~IvSN~L~f~~d-----------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV---KVVSNFMDFDED-----------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc---eEEeeeEEECCC-----------CeEeCCCC
Confidence 4679999999999999999999999999999999999999853210 110000000000 00111
Q ss_pred --cChhhHHHHHHH-----Hh--hCCCEEEEEcCCccChHhhhcC---CeeeEec--c-c----hHHHhhccCEEecCCC
Q 002430 569 --VFPEHKYEIVKR-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPG 629 (923)
Q Consensus 569 --~sP~~K~~iV~~-----lq--~~g~~V~m~GDG~NDapaLk~A---dVGIamg--~-g----td~A~~aADivl~~~~ 629 (923)
+....|.+.+.. ++ .....|.|+|||.||++|-.-. +--+.+| + - -+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 011346554432 22 1235688999999999996544 2233333 2 1 2335678999999987
Q ss_pred chhHHHHH
Q 002430 630 LSVIISAV 637 (923)
Q Consensus 630 ~~~i~~~i 637 (923)
=-.++.+|
T Consensus 266 t~~v~~~i 273 (277)
T TIGR01544 266 TLEVANSI 273 (277)
T ss_pred CchHHHHH
Confidence 66777665
No 88
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.89 E-value=0.0031 Score=66.41 Aligned_cols=119 Identities=14% Similarity=0.151 Sum_probs=76.8
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-++.||+.++++.|++.|+++.++|+........+.++.|+..-. ...+.+ +. .....|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~-~~------------------~~~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASA-EK------------------LPYSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEc-cc------------------CCCCCC
Confidence 357899999999999999999999999999999999999985421 111111 00 001112
Q ss_pred hhHHHHHHHHhhCC---CEEEEEcCCccChHhhhcCCeeeEe-ccc---hHHHhhccCEEecCCCchhHH
Q 002430 572 EHKYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 634 (923)
Q Consensus 572 ~~K~~iV~~lq~~g---~~V~m~GDG~NDapaLk~AdVGIam-g~g---td~A~~aADivl~~~~~~~i~ 634 (923)
.-. -+-+.+++.| ..|.|+||..||+.|-++|++.... ..+ .+.-...+|+++ .+|..+.
T Consensus 150 ~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 150 HPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred CHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 111 2333344333 4589999999999999999987554 322 212223577776 3455543
No 89
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.87 E-value=0.007 Score=65.81 Aligned_cols=118 Identities=11% Similarity=0.095 Sum_probs=79.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... . .++.+ ...+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~-----------------------~~~~~ 196 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAG-----------------------TPILS 196 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEec-----------------------CCCCC
Confidence 56799999999999999999999999999999999999985321 1 11111 00011
Q ss_pred hHHHHHHHHhh---CCCEEEEEcCCccChHhhhcCCeeeEe-ccc--h--HHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIAV-ADA--T--DAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~---~g~~V~m~GDG~NDapaLk~AdVGIam-g~g--t--d~A~~aADivl~~~~~~~i~~~i 637 (923)
.+.-+.+.+++ ....++|+||+.+|..|-++|++-... ..| + +.....+|+++ +++..+...+
T Consensus 197 k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 197 KRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 12222233333 235689999999999999999886432 222 2 23344689988 5677776654
No 90
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.84 E-value=0.0044 Score=65.04 Aligned_cols=121 Identities=18% Similarity=0.197 Sum_probs=78.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC-CCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
.++.||+.+.++.|++.|+++.++||-....+..+-+..|+.. +..+ ..+... . ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~-~------------------~~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPS-D------------------VAAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCC-c------------------CCCCC
Confidence 4789999999999999999999999999999999999999851 1111 111111 0 00112
Q ss_pred hhhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcCCeee--Eeccch----HHHhhccCEEecCCCchhHHH
Q 002430 571 PEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 571 P~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~AdVGI--amg~gt----d~A~~aADivl~~~~~~~i~~ 635 (923)
|... .+-+.+++. ...+.|+||+.+|..|-++|++.. ++..|. ......+|.++ +++..+..
T Consensus 146 P~p~-~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 146 PAPD-LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred CCHH-HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 3211 222333332 256999999999999999999986 343321 22234578777 45555544
No 91
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.82 E-value=0.0043 Score=65.72 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=80.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... ..+.+.+.. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC----------------CCCCCCHH
Confidence 57899999999999999999999999988888888888875321 111111100 01111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee-Eeccc----h-HHHhhccCEEecCCCchhHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADA----T-DAARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI-amg~g----t-d~A~~aADivl~~~~~~~i~~~ 636 (923)
-=..+.+.+.-...-+.|+||+.||..|-++|++-. ++..| . ......+|+++ +++..+...
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 223445555444566999999999999999998874 33221 1 12234689988 455555543
No 92
>PRK11590 hypothetical protein; Provisional
Probab=96.68 E-value=0.0076 Score=62.96 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=74.7
Q ss_pred CCCccHHHHH-HHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I-~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+.+.+....+. . .-..+.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 4589999999 57888999999999999999999999999621 0111222211110000 0 0123567
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCccChHhhhcCCeeeEecc
Q 002430 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (923)
Q Consensus 572 ~~K~~iV~~l-q~~g~~V~m~GDG~NDapaLk~AdVGIamg~ 612 (923)
+.|.+-++.. .......-+-||..||.|+|+.|+-.+++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8898877644 3334455678999999999999999999974
No 93
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.55 E-value=0.0028 Score=65.34 Aligned_cols=94 Identities=17% Similarity=0.081 Sum_probs=66.5
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
.+++.+++.++++.|++.|+++.++||-....+..+-+++|+..-. ...+ +.+. +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~-~~~~-----------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQI-WMED-----------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEE-eecC-----------------CCCCcC
Confidence 4557788899999999999999999999999999999999985321 1111 1100 111333
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcC
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~A 604 (923)
|+--..+.+.+.-...-|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444555555555556799999999999887664
No 94
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.53 E-value=0.016 Score=62.49 Aligned_cols=42 Identities=7% Similarity=-0.004 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 534 (923)
..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999853
No 95
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.50 E-value=0.016 Score=62.97 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-.. ..+.+.+. ..+..|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDD------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCc------------------CCCCCC-
Confidence 467999999999999999999999999888877777777643110 11111110 001122
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCccChHhhhcCCe
Q 002430 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADI 606 (923)
Q Consensus 573 ~K~~iV~~lq~~g----~~V~m~GDG~NDapaLk~AdV 606 (923)
+..-+.+.+++.| .-+.|+||..+|..|-++|++
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 1223344444433 458999999999999999997
No 96
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.46 E-value=0.012 Score=63.43 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999998899985321 1111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee-Ee-ccchHHHhhccCEEecCCCchhH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVI 633 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI-am-g~gtd~A~~aADivl~~~~~~~i 633 (923)
-=....+.+.-....+.|+||..+|..|-++|++-. ++ +.........+|+++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 112333333333456899999999999999999843 33 322222333578887 345444
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.41 E-value=0.011 Score=61.77 Aligned_cols=106 Identities=12% Similarity=0.028 Sum_probs=73.6
Q ss_pred CCCccHHHHHH-HHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~-~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++|++.++|+ .+++.|++++++|+=....+..+|+..|+... ..+.+.+.+.. ++- .. .=..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~gg-------~~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NGG-------WV-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CCc-------eE-cCccCCC
Confidence 46899999996 78889999999999999999999998665221 11112211100 000 00 0123567
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 572 ~~K~~iV~~l-q~~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
++|.+-++.. .......-+=||..||.|||+.||-.+++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 8898877644 323344568899999999999999999996
No 98
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.39 E-value=0.017 Score=62.00 Aligned_cols=94 Identities=17% Similarity=0.130 Sum_probs=65.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++||.....+..+-++.|+..... ..+.+.+. ..+-.|.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~--d~ii~~~~------------------~~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP--DYNVTTDD------------------VPAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC--ceEEcccc------------------CCCCCCC
Confidence 467999999999999999999999999999988888888754211 11111111 0011231
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCccChHhhhcCCee
Q 002430 573 HKYEIVKRLQERK----HICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K~~iV~~lq~~g----~~V~m~GDG~NDapaLk~AdVG 607 (923)
...+.+++++.| +.+.|+||..+|..|-+.|++-
T Consensus 159 -p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 -PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444433 4589999999999999999964
No 99
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.32 E-value=0.012 Score=69.22 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ...+.+.+ +-..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCC------------------CCCCCCcH
Confidence 67899999999999999999999999999999999999985321 11111110 00011232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEecc--chHHHhhccCEEecCCCchhHHHHHHH
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 639 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~--gtd~A~~aADivl~~~~~~~i~~~i~~ 639 (923)
-=....+.++ -..+.|+||..+|+.|-++|++ .|++.. +.+.....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222222 2469999999999999999997 444532 2222234588888 567777766643
No 100
>PLN02382 probable sucrose-phosphatase
Probab=96.28 E-value=0.0059 Score=70.31 Aligned_cols=70 Identities=24% Similarity=0.276 Sum_probs=50.1
Q ss_pred ecChh--hHHHHHHHHhhC----C---CEEEEEcCCccChHhhhcCC-eeeEeccchHHHhhcc--------CEEecC-C
Q 002430 568 GVFPE--HKYEIVKRLQER----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLTE-P 628 (923)
Q Consensus 568 r~sP~--~K~~iV~~lq~~----g---~~V~m~GDG~NDapaLk~Ad-VGIamg~gtd~A~~aA--------Divl~~-~ 628 (923)
.+.|. .|..-++.|.++ | ..|.++||+.||.+||+.|+ .||+|+++.+..++.+ |++..+ .
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 44443 588878777654 3 47899999999999999999 6999999988887643 555443 2
Q ss_pred CchhHHHHH
Q 002430 629 GLSVIISAV 637 (923)
Q Consensus 629 ~~~~i~~~i 637 (923)
+-..|..++
T Consensus 248 ~~~GI~~al 256 (413)
T PLN02382 248 CAAGIIQAI 256 (413)
T ss_pred CccHHHHHH
Confidence 334455554
No 101
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.25 E-value=0.022 Score=68.01 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=39.7
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 486 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
|.+.-.|. .-+.+.++|++|+++|+.+++.||....-...+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 54444333 3357899999999999999999999999999999999973
No 102
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.13 E-value=0.029 Score=60.11 Aligned_cols=117 Identities=12% Similarity=0.125 Sum_probs=77.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+-....+..+-+++|+.... ..++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46799999999999999999999999999999999999985321 1111111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-eccc---hHHHhhccCEEecCC
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA---TDAARSASDIVLTEP 628 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg~g---td~A~~aADivl~~~ 628 (923)
-=....+.++-....+.|+||..+|..|=++|++-.. +..| .+.....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 3334444444444668999999999999999987533 2222 122234688888543
No 103
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.08 E-value=0.01 Score=62.85 Aligned_cols=88 Identities=20% Similarity=0.230 Sum_probs=61.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccC----ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
+.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+... . ..+.+.+.. ..-
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f--~~i~~~d~~------------------~~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N--PVIFAGDKP------------------GQY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e--eEEECCCCC------------------CCC
Confidence 4455999999999999999999997 66789999999999531 1 112111110 001
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 570 sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.| +|. ..+++.| ++.|+||..||..+-++|.+-
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 12 233 3455555 478999999999999988764
No 104
>PRK11587 putative phosphatase; Provisional
Probab=96.03 E-value=0.026 Score=59.14 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=71.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh-
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP- 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP- 571 (923)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. . ...+ +.+. ..+..|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~-~~~~------------------~~~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFV-TAER------------------VKRGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEE-EHHH------------------hcCCCCC
Confidence 478999999999999999999999988776666556667631 1 1111 1100 011123
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee-eEeccch-HHHhhccCEEec
Q 002430 572 -EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 626 (923)
Q Consensus 572 -~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG-Iamg~gt-d~A~~aADivl~ 626 (923)
+-=....+.+.-....+.|+||..+|+.|-++|++- |++..+. ......+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 222223333333346799999999999999999984 5554332 223346788764
No 105
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.02 E-value=0.057 Score=67.21 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=98.1
Q ss_pred HHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEecc--CCCCCccHHHHHHHHHh-CCCEEEEEccCChHHHHH
Q 002430 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKE 525 (923)
Q Consensus 449 ~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i--~D~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~tA~~ 525 (923)
+...+.|...-.|.+++-+.. +++....- ...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344455555556777776643 33332111 12366899999999999 699999999999888777
Q ss_pred HHHHhCCC---CCC---C-CCCc---ccC----------------------cccc---cc------cCcch--------H
Q 002430 526 TGRRLGMG---TNM---Y-PSSS---LLG----------------------QDKD---AS------IAALP--------V 556 (923)
Q Consensus 526 ia~~~Gi~---~~~---~-~~~~---l~~----------------------~~~~---~~------~~~~~--------~ 556 (923)
.....++. .+. . +... ... ...+ .. ..+.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 65544431 000 0 0000 000 0000 00 00011 1
Q ss_pred HHHhhh----c--Ce-----EEecCh--hhHHHHHHHHhhC--CCEEEEEcCCccChHhhhcC---CeeeEeccchHHHh
Q 002430 557 DELIEK----A--DG-----FAGVFP--EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 618 (923)
Q Consensus 557 ~~~~~~----~--~v-----far~sP--~~K~~iV~~lq~~--g~~V~m~GDG~NDapaLk~A---dVGIamg~gtd~A~ 618 (923)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 11 123344 4799999888874 25799999999999999986 578888864 5
Q ss_pred hccCEEecCCCchhHHHHH
Q 002430 619 SASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 619 ~aADivl~~~~~~~i~~~i 637 (923)
.+|++.|.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6888998654 3444433
No 106
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.00 E-value=0.021 Score=59.04 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~G 531 (923)
++.+++.++|++|++.|+++.++||-.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
No 107
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.98 E-value=0.013 Score=61.92 Aligned_cols=87 Identities=23% Similarity=0.305 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC----ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
.|.+++.+.++.+++.|+++.++||- ...|+..+.+..|+....+.. .+ ++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~-vi-----------------------l~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP-VI-----------------------FAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee-EE-----------------------EcC
Confidence 36788999999999999999999994 466899999999994221111 11 111
Q ss_pred cCh--hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 569 VFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 569 ~sP--~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
-++ .+|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 111 34544 344444 488999999999999999874
No 108
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.91 E-value=0.02 Score=60.01 Aligned_cols=97 Identities=16% Similarity=0.140 Sum_probs=64.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+-+...+...-+++|+.... ..++.+.+ ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999998887777778888874311 11111100 1112232
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCc-cChHhhhcCCe-eeEec
Q 002430 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI-GIAVA 611 (923)
Q Consensus 573 ~K~~iV~~lq~~---g~~V~m~GDG~-NDapaLk~AdV-GIamg 611 (923)
.. -+-+.+++. ...+.|+||.. +|+.+-++|++ .|.+.
T Consensus 153 ~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 22 223333433 35689999998 99999999987 44454
No 109
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.85 E-value=0.015 Score=57.22 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=67.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
.++|+-++.++.+++.+|.++++|+--.-....+=..++=...++......... .....-.-.++-. .-...-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~---~ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND---YIHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---eEcCCCceeeecC---CccccCC
Confidence 368999999999999999999999876555555444444111111011110000 0000000000000 0122346
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+|...|+.+++..+.+-|+|||+.|..|-+.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988877776554
No 110
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.64 E-value=0.028 Score=62.04 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=75.7
Q ss_pred cCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
..+++.+++.++++.|++.|+++.++||.....+..+.+.+|+....+ ..+.+.+. ....+... .--+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccC-CCCCC
Confidence 568899999999999999999999999999999999999998853111 11111110 00000000 01234
Q ss_pred ChhhHHHHHHHHhh-CCCEEEEEcCCccChHhhhcCCeee
Q 002430 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 570 sP~~K~~iV~~lq~-~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
.|+-|....+.+-. .-..+.|+||..||+-+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46677777766533 2367999999999999999998874
No 111
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.61 E-value=0.062 Score=54.55 Aligned_cols=127 Identities=20% Similarity=0.104 Sum_probs=69.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChH---------------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~---------------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
++.||+.+++++|++.|+++.++|..... ....+-++.|+.-. ..+..... ..++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCC----CCCC--
Confidence 36799999999999999999999987621 11112233444100 00000000 0000
Q ss_pred HHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-eccchH---HHhhcc--CEEecCCCch
Q 002430 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADATD---AARSAS--DIVLTEPGLS 631 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg~gtd---~A~~aA--Divl~~~~~~ 631 (923)
....+-.|+--..+.+.+.-..+.+.|+||..+|+.+-++|++-.- +..|.. .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 0011112332234444444445679999999999999999997422 223321 112235 7776 4566
Q ss_pred hHHHHH
Q 002430 632 VIISAV 637 (923)
Q Consensus 632 ~i~~~i 637 (923)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666554
No 112
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.55 E-value=0.09 Score=53.48 Aligned_cols=141 Identities=19% Similarity=0.222 Sum_probs=92.1
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccC------ccc----------ccccCcchHH
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG------QDK----------DASIAALPVD 557 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~------~~~----------~~~~~~~~~~ 557 (923)
+-||+.++.+.|++. ...+++|---..-+..+|..+|++........+.- .++ .+.+++++
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee-- 160 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE-- 160 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH--
Confidence 458999999988775 45666777777788999999998542211111100 000 01122222
Q ss_pred HHhhhc-CeEEecChhhHHHHHHHHh---------------hC---CCEEEEEcCCccChHhhhcCC--eeeEec-cchH
Q 002430 558 ELIEKA-DGFAGVFPEHKYEIVKRLQ---------------ER---KHICGMTGDGVNDAPALKKAD--IGIAVA-DATD 615 (923)
Q Consensus 558 ~~~~~~-~vfar~sP~~K~~iV~~lq---------------~~---g~~V~m~GDG~NDapaLk~Ad--VGIamg-~gtd 615 (923)
+.++. .+|.|..|..-.+|++..+ +. ....+.+||.+.|..||+.+. =|+|++ +|.+
T Consensus 161 -lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 161 -LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred -HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 22222 1588888865545544444 32 334678999999999999875 247777 8888
Q ss_pred HHhhccCEEecCCCchhHHHHHH
Q 002430 616 AARSASDIVLTEPGLSVIISAVL 638 (923)
Q Consensus 616 ~A~~aADivl~~~~~~~i~~~i~ 638 (923)
-|..-||+.+..++.......|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 88889999999999888877774
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.51 E-value=0.034 Score=57.26 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=63.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+-+......+.+++|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999998888888888889974311 11111100 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
-. ..+.+.+.-.-..+.|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11 223333333345688999999999998888765
No 114
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.27 E-value=0.054 Score=59.39 Aligned_cols=114 Identities=18% Similarity=0.138 Sum_probs=68.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCC-CcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.||+.+.++.|++.|+++.++|+-.......+-+..+... .... ..+ +.+. +.+..|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v-~~~~------------------~~~~KP 203 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVF-AGDD------------------VPKKKP 203 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEE-eccc------------------cCCCCC
Confidence 578999999999999999999999988776665555443211 0000 011 1000 111122
Q ss_pred h--hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-ccch--HHHhhccCEEec
Q 002430 572 E--HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADAT--DAARSASDIVLT 626 (923)
Q Consensus 572 ~--~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g~gt--d~A~~aADivl~ 626 (923)
+ -=..+.+.+.-....+.|+||+.+|..|-++|++.... ..|. .-....+|+++.
T Consensus 204 ~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 204 DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 2 22333344433345699999999999999999977554 2322 111235788873
No 115
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.18 E-value=0.027 Score=57.15 Aligned_cols=91 Identities=9% Similarity=0.038 Sum_probs=57.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|+++|+++.++|+... +...-+++|+.... ...+.+.+ ..+..|.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAE-------------------IKKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhh-------------------cCCCCCC
Confidence 5789999999999999999999997532 35566777774321 11111100 1111232
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCccChHhhhcCCee
Q 002430 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K~~iV~~lq~~---g~~V~m~GDG~NDapaLk~AdVG 607 (923)
..-+-+.+++. ...+.|+||..+|+.+-++|++-
T Consensus 144 -p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 -PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22222333333 34588999999999999999874
No 116
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.18 E-value=0.065 Score=51.24 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=61.2
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCC--------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~--------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 563 (923)
-++.|++.++++.|+++|+++.++|+.. ......+.+++|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~--~---------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP--H---------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--C----------------
Confidence 3678999999999999999999999988 66777788888874210 00000 0
Q ss_pred CeEEecChhhHHHHHHHHh-hCCCEEEEEcC-CccChHhhhcCCe
Q 002430 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADI 606 (923)
Q Consensus 564 ~vfar~sP~~K~~iV~~lq-~~g~~V~m~GD-G~NDapaLk~AdV 606 (923)
+.+-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111221123344442 33466999999 5899999988865
No 117
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.07 E-value=0.018 Score=57.22 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=66.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.|++.+.++.|++.|++++++|+-.........+++|+..- ....+...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHH
Confidence 35789999999999999999999999999999999999998521 11121111100 000011
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
+-=..+.+.+.-....+.|+||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 111334444444456699999999999999988764
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.93 E-value=0.06 Score=56.38 Aligned_cols=119 Identities=12% Similarity=0.087 Sum_probs=73.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++. +++.++|+-....+..+-+++|+..-. ..++...+ .....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~-------------------~~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSED-------------------AGIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCc-------------------cCCCCCC
Confidence 5789999999999999 999999998888888888888885321 11111100 0011232
Q ss_pred hH--HHHHHHH-hhCCCEEEEEcCCc-cChHhhhcCCe-eeEec--cchHHHhhccCEEecCCCchhHHH
Q 002430 573 HK--YEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 573 ~K--~~iV~~l-q~~g~~V~m~GDG~-NDapaLk~AdV-GIamg--~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
.. ....+.+ .-....+.|+||.. +|+.+=+++++ +|.+. ..+......+|.++ ++++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 21 2333333 22234589999998 89999999997 33443 22212223466666 44555443
No 119
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=94.87 E-value=0.11 Score=58.66 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=77.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..-. ..++ +.+. +.+-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv-~sdd------------------v~~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIV-AAED------------------VYRGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEE-ecCc------------------CCCCCCC
Confidence 46799999999999999999999999999999999999985321 1111 1110 0111222
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe-ccchHHH-hhccCEEecCCCchhH
Q 002430 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADATDAA-RSASDIVLTEPGLSVI 633 (923)
Q Consensus 573 --~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam-g~gtd~A-~~aADivl~~~~~~~i 633 (923)
-=....+.+.-....+.|+||..+|+.|-+.|++-... ..+.+.. ...||+++ +++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 22334444444456799999999999999999985433 3332222 23588887 445444
No 120
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.76 E-value=0.075 Score=53.58 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988776 5555557874311 111111000 00111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV 606 (923)
-=..+.+.+.-....+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2233344443345678999999999998888876
No 121
>PRK06769 hypothetical protein; Validated
Probab=94.75 E-value=0.075 Score=53.61 Aligned_cols=99 Identities=9% Similarity=-0.029 Sum_probs=57.4
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChH--------HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCe
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~--------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 565 (923)
+.||+.+++++|++.|+++.++|+.... .....-+..|+..-. .. .....+.. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~-~~~~~~~~----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-LC-PHKHGDGC----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-EC-cCCCCCCC----------------C
Confidence 6799999999999999999999987531 122223344542110 00 00000000 0
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 566 far~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
..+-.|+-=..+.+.+.-.-+-+.|+||..+|+.|=++|++-...
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 111122222344444433345699999999999999999886543
No 122
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=94.67 E-value=0.063 Score=56.61 Aligned_cols=99 Identities=11% Similarity=0.024 Sum_probs=64.5
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+.... ..++.+.+ +.+-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888877777778874311 11111100 1111221
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCee--eEecc
Q 002430 573 --HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAVAD 612 (923)
Q Consensus 573 --~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG--Iamg~ 612 (923)
-=....+.+.-....+.|+||..+|+.+-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 11122222322345699999999999999999995 45543
No 123
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.54 E-value=0.091 Score=52.90 Aligned_cols=109 Identities=6% Similarity=-0.050 Sum_probs=68.3
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccC-ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKAD 564 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 564 (923)
....-+-++.||+.++++.|+++|+++.++|+- ....+..+-..+|+.... . -..+..... ..
T Consensus 38 ~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~---~------------~~~~~~~Fd-~i 101 (174)
T TIGR01685 38 DKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAG---K------------TVPMHSLFD-DR 101 (174)
T ss_pred eCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCC---C------------cccHHHhce-ee
Confidence 333444567899999999999999999999965 888888888888874100 0 000001110 00
Q ss_pred eEEecChhhH--HHHHHHHhhC------CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 565 GFAGVFPEHK--YEIVKRLQER------KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 565 vfar~sP~~K--~~iV~~lq~~------g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
+.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|.+-...
T Consensus 102 v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1111111112 2344544432 25699999999999999988876554
No 124
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.40 E-value=0.055 Score=54.81 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|++.|+++.++|+- ..+..+-+++|+..-. ..++ +.+. ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~-~~~~------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIV-DADE------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEee-ehhh------------------CCCCCCC
Confidence 68899999999999999999999986 5566777778874211 1111 1100 0112232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 573 ~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.. ..+.+.+.-....+.|+||..+|+.+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 21 122222222235588999999999999998774
No 125
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.34 E-value=0.31 Score=47.73 Aligned_cols=109 Identities=15% Similarity=0.160 Sum_probs=75.6
Q ss_pred HHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002430 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (923)
Q Consensus 451 ~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~ 530 (923)
..+.+..+|.|.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|.-++.-+...+..+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998775543 333321 1235578888899999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe-cChhhHHHHHHHHhhC---CCEEEEEcCCc-cChHhhhcCC
Q 002430 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFPEHKYEIVKRLQER---KHICGMTGDGV-NDAPALKKAD 605 (923)
Q Consensus 531 Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar-~sP~~K~~iV~~lq~~---g~~V~m~GDG~-NDapaLk~Ad 605 (923)
|+.- ..| ..|-- ..+-+++++. -+-|+|+||-. .|+-+=+.|+
T Consensus 84 ~v~f-------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 84 GVPF-------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CCce-------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 9842 111 12222 2455666665 45799999985 5766655554
Q ss_pred e
Q 002430 606 I 606 (923)
Q Consensus 606 V 606 (923)
+
T Consensus 132 ~ 132 (175)
T COG2179 132 M 132 (175)
T ss_pred c
Confidence 3
No 126
>PLN02940 riboflavin kinase
Probab=94.31 E-value=0.1 Score=59.58 Aligned_cols=112 Identities=20% Similarity=0.181 Sum_probs=69.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHH-HhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~-~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.||+.+.++.|++.|+++.++|+-....+...-. ..|+.... ..++ +.+. +.+..|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii-~~d~------------------v~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIV-GGDE------------------VEKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEE-ehhh------------------cCCCCC
Confidence 467999999999999999999999998877766554 56763211 0111 1000 111123
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE-eccc--hHHHhhccCEEe
Q 002430 572 --EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VADA--TDAARSASDIVL 625 (923)
Q Consensus 572 --~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa-mg~g--td~A~~aADivl 625 (923)
+-=..+.+.+.-..+.|.|+||..+|+.|-++|++-.. +..+ .......+|.++
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 21123333333334669999999999999999998743 3332 222333566665
No 127
>PTZ00174 phosphomannomutase; Provisional
Probab=94.28 E-value=0.034 Score=59.56 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=48.2
Q ss_pred ecCh--hhHHHHHHHHhhCCCEEEEEcC----CccChHhhhcC-CeeeEeccchHHHhhccCEEe
Q 002430 568 GVFP--EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 625 (923)
Q Consensus 568 r~sP--~~K~~iV~~lq~~g~~V~m~GD----G~NDapaLk~A-dVGIamg~gtd~A~~aADivl 625 (923)
.+.| -+|..-++.|.+...-|+++|| |-||.+||+.| -.|++++++++..+..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4799999999887778999999 99999999987 788999899999987776543
No 128
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.25 E-value=0.25 Score=48.99 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=65.2
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH---HHHHHh---C--CCCCCCCCCcccCcccccccCcchHHHHhhh
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~---~ia~~~---G--i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 562 (923)
+|.+.|+++++++++++.|+++..+||.....+. ....++ | ++. ...+. .. +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~-~~------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLL-SP------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEE-cC------Ccchhh-hhc
Confidence 4678899999999999999999999999987764 334442 2 321 01110 00 000000 000
Q ss_pred cCeEEecChh-hHHHHHHHHhh-----CCCEEEEEcCCccChHhhhcCCe
Q 002430 563 ADGFAGVFPE-HKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADI 606 (923)
Q Consensus 563 ~~vfar~sP~-~K~~iV~~lq~-----~g~~V~m~GDG~NDapaLk~AdV 606 (923)
.+. .-.|+ .|...++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 22343 48888887776 35778889999999999987755
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=94.21 E-value=0.13 Score=53.92 Aligned_cols=120 Identities=15% Similarity=0.123 Sum_probs=73.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.|+ .|+++.++|......+...-++.|+..-. ..++.+.+ .....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-------------------~~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQ-------------------VGVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECc-------------------cCCCCCC
Confidence 46899999999999 68999999998888877777778874211 01111000 0011232
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCc-cChHhhhcCCee-eEec-cchH-HHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQERK----HICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~g----~~V~m~GDG~-NDapaLk~AdVG-Iamg-~gtd-~A~~aADivl~~~~~~~i~~~i 637 (923)
..-+-..+++.| ..+.|+||.. +|+.+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 -p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 -VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred -HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 122223333332 4699999998 799999999985 4443 2221 1112467877 4566665543
No 130
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.45 E-value=0.16 Score=51.14 Aligned_cols=85 Identities=13% Similarity=0.114 Sum_probs=59.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCC-hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
..+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+... +....
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~------------------------------~~~~K 91 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL------------------------------PHAVK 91 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE------------------------------cCCCC
Confidence 3578999999999999999999999987 5667777777776310 00012
Q ss_pred hhhHHHHHHHHhh---CCCEEEEEcCCc-cChHhhhcCCee
Q 002430 571 PEHKYEIVKRLQE---RKHICGMTGDGV-NDAPALKKADIG 607 (923)
Q Consensus 571 P~~K~~iV~~lq~---~g~~V~m~GDG~-NDapaLk~AdVG 607 (923)
|... .+-..+++ ....+.|+||.. .|..+=++|++-
T Consensus 92 P~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 92 PPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2211 22223333 234599999998 799999999874
No 131
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.44 E-value=0.14 Score=50.16 Aligned_cols=97 Identities=19% Similarity=0.141 Sum_probs=57.3
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCCh---------------HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
++.||+.++++.|++.|+++.++|..+. .....+.+++|+.....-.. ..+....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4789999999999999999999998652 34455667777742100000 0000000
Q ss_pred HHhhhcCeEEecChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 558 ELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
...+ .|+-+ ..+.+.+.-..+-+.|+||...|..+-+.|++-
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0000 23211 122222222235699999999999988888764
No 132
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.31 E-value=0.35 Score=48.87 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCC
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQ 519 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~ 519 (923)
+.|++.++++.|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
No 133
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.18 E-value=0.26 Score=52.04 Aligned_cols=103 Identities=21% Similarity=0.280 Sum_probs=67.5
Q ss_pred CCCccHHHHHHHH--HhCCCEEEEEccCChHHHHHHHHHhCCCCC---CCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTN---MYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 493 ~lr~~~~~~I~~l--~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
|+.|+.++.++.+ ++.|+.+.++|.=|..--..+=+.-|+... ++........ ...+ .+... ..+-|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~--~G~l---~v~py--h~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA--DGRL---RVRPY--HSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC--CceE---EEeCc--cCCCCC
Confidence 5678999999999 568999999999998888888888887532 1111110000 0000 00000 012355
Q ss_pred ecCh-hhHHHHHHHHhhC----C---CEEEEEcCCccCh-Hhhh
Q 002430 568 GVFP-EHKYEIVKRLQER----K---HICGMTGDGVNDA-PALK 602 (923)
Q Consensus 568 r~sP-~~K~~iV~~lq~~----g---~~V~m~GDG~NDa-paLk 602 (923)
++.| .=|..+++.+++. | ..|.++|||.||- |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 6655 4799999988875 4 6899999999996 5543
No 134
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=92.90 E-value=0.11 Score=50.91 Aligned_cols=88 Identities=23% Similarity=0.339 Sum_probs=55.0
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
..+|+.+.++.|++.|+++.++|+-....+...-+.. +... . . .+.+.+. +. ..|.
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~-~i~~~~~------------------~~-~Kp~- 120 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-D-LILGSDE------------------FG-AKPE- 120 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-c-EEEecCC------------------CC-CCcC-
Confidence 4579999999999999999999999888887777664 3221 1 0 1111100 01 1221
Q ss_pred HHHHHHHHhhCCC--EEEEEcCCccChHhhhcCC
Q 002430 574 KYEIVKRLQERKH--ICGMTGDGVNDAPALKKAD 605 (923)
Q Consensus 574 K~~iV~~lq~~g~--~V~m~GDG~NDapaLk~Ad 605 (923)
..-+.+.+++.|. .+.|+||..+|..|-++|+
T Consensus 121 ~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 121 PEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 1222222333221 6899999999998877763
No 135
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.80 E-value=0.5 Score=50.94 Aligned_cols=87 Identities=14% Similarity=0.086 Sum_probs=58.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHH---HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
..++-|++.+.++.+++.|+++.++|+-.... +...-++.|+.... .+ .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--~d-----------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--EE-----------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--cc-----------------------eEEe
Confidence 35577999999999999999999999976433 33445667775311 01 1222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhh
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk 602 (923)
|-....|..-.+.+.+.-.+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 22223455566666666678999999999986543
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.75 E-value=0.22 Score=51.37 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=56.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++-||+.++++.|++.|+++.++|+-... ....-+++|+.... ..++...+ +....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~-------------------~~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYE-------------------VGAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecc-------------------cCCCCCC
Confidence 57799999999999999999999975543 45666777763211 01110000 0001222
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCc-cChHhhhcCCe
Q 002430 573 HKYEIVKRLQER---KHICGMTGDGV-NDAPALKKADI 606 (923)
Q Consensus 573 ~K~~iV~~lq~~---g~~V~m~GDG~-NDapaLk~AdV 606 (923)
..-+-+.+++. ...+.|+||.. +|+.+=++|++
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 -PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred -HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 12223333333 35689999997 89988888765
No 137
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.70 E-value=1.1 Score=47.62 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=59.2
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHH--HHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~--~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 563 (923)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+.. ..++... .
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~Ii~s~---------~-------- 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMIISSG---------E-------- 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceEEccH---------H--------
Confidence 556666788999999999999999999999995544333 4557778753110 1111100 0
Q ss_pred CeEEecChhhHHHHHHHHhh---CCCEEEEEcCCccChHhhhcCC
Q 002430 564 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 605 (923)
Q Consensus 564 ~vfar~sP~~K~~iV~~lq~---~g~~V~m~GDG~NDapaLk~Ad 605 (923)
....-+.+.+++ .+..+.|+||+.+|...+..++
T Consensus 79 --------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 --------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 001122222233 2466999999999998886543
No 138
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.88 E-value=0.27 Score=52.60 Aligned_cols=66 Identities=21% Similarity=0.204 Sum_probs=46.8
Q ss_pred ecChhhHHHHHHHHhhC----CCEEEEEcCCccChHhhhcC--------CeeeEeccchHHHhhccCEEecCCCchhHHH
Q 002430 568 GVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~----g~~V~m~GDG~NDapaLk~A--------dVGIamg~gtd~A~~aADivl~~~~~~~i~~ 635 (923)
+-.+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 33456788877776553 34689999999999999998 4788885443 3567899884 4555544
Q ss_pred HH
Q 002430 636 AV 637 (923)
Q Consensus 636 ~i 637 (923)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
No 139
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.85 E-value=0.4 Score=53.83 Aligned_cols=97 Identities=12% Similarity=0.057 Sum_probs=56.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccC---------------ChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchH
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 556 (923)
-+|.|++.++++.|++.|+++.++|+= ....+..+.+..|+.-+ ..+.+... ..+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~----~sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHF----PED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCc----Ccc--
Confidence 367899999999999999999999982 12334555666665310 01000000 000
Q ss_pred HHHhhhcCeEEecChhhHHHHHHHH-hh---CCCEEEEEcCCccChHhhhcCCeee
Q 002430 557 DELIEKADGFAGVFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 557 ~~~~~~~~vfar~sP~~K~~iV~~l-q~---~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
+..+| .|+ -.++..+ ++ ....+.|+||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00111 232 2233222 22 2367999999999999988887753
No 140
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=91.81 E-value=0.23 Score=49.40 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=57.4
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCC---------------hHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHH
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~---------------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (923)
++-|++.+++++|++.|+++.++|.-. ......+-+++|+.- . ..+.+.... .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 456899999999999999999999742 334555666677631 0 011000000 00
Q ss_pred HHhhhcCeEEecChhhHHHHHHH-HhhC---CCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 558 ELIEKADGFAGVFPEHKYEIVKR-LQER---KHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 558 ~~~~~~~vfar~sP~~K~~iV~~-lq~~---g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
+ +....|. ..+++. +++. ...+.|+||+.+|..+-++|++-...
T Consensus 98 ------~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001232 222222 2222 24589999999999999998876543
No 141
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.62 E-value=0.25 Score=48.46 Aligned_cols=93 Identities=17% Similarity=0.011 Sum_probs=63.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
-++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+.... ...++ +.+. +.+..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~-~~~d------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRL-FRDE------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEE-ECcc------------------ccccCC
Confidence 357999999999999 57999999999999999999998874311 11111 1111 111123
Q ss_pred hhHHHHHHHHhh---CCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 572 EHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 572 ~~K~~iV~~lq~---~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
. +.+.+++ ....|.|+||..+|..|-++|.|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 4444443 34679999999999998877755543
No 142
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=91.16 E-value=0.3 Score=52.33 Aligned_cols=45 Identities=29% Similarity=0.347 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChHhhhcCCeeeEeccchHH
Q 002430 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 616 (923)
Q Consensus 572 ~~K~~iV~~lq~~-g---~~V~m~GDG~NDapaLk~AdVGIamg~gtd~ 616 (923)
..|..-|+.|+++ + +.|..+||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 4798999988875 2 3466789999999999999999999977665
No 143
>PLN02811 hydrolase
Probab=90.91 E-value=0.41 Score=50.17 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHH-HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~-ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.||+.+.|+.|++.|+++.++||-+...... ..+..|+.. .. ...+.+.+.+ +.+..|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh-----------------ccCCCC
Confidence 467999999999999999999999977543322 222223321 00 0011100000 011112
Q ss_pred h--hHHHHHHHHh---hCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 572 E--HKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 572 ~--~K~~iV~~lq---~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+ -=...++.+. -...-+.|+||...|+.|-++|++-..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 2 1123333332 223569999999999999999998543
No 144
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.94 E-value=0.55 Score=49.28 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=62.2
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhC---CCCCCCCCCcccCcccccccCcchHHHHhhhcCeEE
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~G---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
+-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +..- + +.... ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f--------------~~~fd-~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------F--------------SGYFD-TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------c--------------ceEEE-eCccc
Confidence 35689999999999999999999999988776666554442 2110 0 00000 00111
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 568 r~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
.-.|+-=..+.+.+.-...-++|+||...|+.|-++|++-...
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1112211334444433345689999999999999999986544
No 145
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=89.85 E-value=1.4 Score=57.19 Aligned_cols=124 Identities=15% Similarity=0.180 Sum_probs=78.6
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhh
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~ 573 (923)
+-||+.+.++.|+++|+++.++|+-....+..+-++.|+...... ..+...+ +.+..|+.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCCH
Confidence 579999999999999999999999988888888888888421111 1111100 11222322
Q ss_pred H--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEeccc---hHHHhhccCEEecCCCchhHHHHH
Q 002430 574 K--YEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA---TDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 574 K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIamg~g---td~A~~aADivl~~~~~~~i~~~i 637 (923)
. ....+.+.-...-+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++.+..--++...+
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~ 291 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDIL 291 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHH
Confidence 1 23334443334668999999999999999988 3444322 333445788888544322333433
No 146
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=89.67 E-value=1.7 Score=44.53 Aligned_cols=112 Identities=16% Similarity=0.215 Sum_probs=67.1
Q ss_pred CCCccHHHHHHHHHhCCC-EEEEEccCChHHHHHHHHHhCCCC---CCCCCC-cccCcccccccCcchHHHHhhhcCeEE
Q 002430 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT---NMYPSS-SLLGQDKDASIAALPVDELIEKADGFA 567 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~tA~~ia~~~Gi~~---~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~vfa 567 (923)
|.-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+ .+++.. .+... ..+.-.... .-+-|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~---G~L~v~pyH----~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDAS---GRLLVRPYH----TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCC---CcEEeecCC----CCCccC
Confidence 567899999999999997 999999988776667777777631 000000 00000 000000000 011244
Q ss_pred ecChh-hHHHHHHHHhhCC-------CEEEEEcCCccCh-HhhhcCCeeeEec
Q 002430 568 GVFPE-HKYEIVKRLQERK-------HICGMTGDGVNDA-PALKKADIGIAVA 611 (923)
Q Consensus 568 r~sP~-~K~~iV~~lq~~g-------~~V~m~GDG~NDa-paLk~AdVGIamg 611 (923)
++-|. =|..++..++..+ ..+.++|||.||. |.++...--+||-
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 54332 4777777766432 2788999999994 8877766666663
No 147
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=89.34 E-value=1.1 Score=42.62 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=34.2
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccC-ChHHHHHHHHHhC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 531 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~tA~~ia~~~G 531 (923)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666666
No 148
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=88.98 E-value=1.9 Score=45.25 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=53.7
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHH---HHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~i---a~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
-|+-|++.+.++.+++.|++|+++||........+ =++.|...- ..+.-+..+ +. ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~LiLR~~~----d~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KHLILRGLE----DS------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----CeeeecCCC----CC------------Cc
Confidence 47789999999999999999999999986542222 234565420 111111000 00 00
Q ss_pred cChhhHHHHHHHHhhCC-CEEEEEcCCccCh
Q 002430 569 VFPEHKYEIVKRLQERK-HICGMTGDGVNDA 598 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g-~~V~m~GDG~NDa 598 (923)
..-+-|.+.=+.+.+.| .+++.+||-.+|-
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 01122667666777666 4678899998885
No 149
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=88.76 E-value=2.2 Score=53.78 Aligned_cols=67 Identities=7% Similarity=0.063 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHH-HhCCCEEEEEccCChHHHHHHHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGR 528 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l-~~aGI~v~mlTGD~~~tA~~ia~ 528 (923)
..++.|.....|.+++-|.. +|+-.....-.|-+++.+++++| ++.|+.|.++||.+..+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455555566777665543 33322212235667899999997 77899999999999988776654
Q ss_pred H
Q 002430 529 R 529 (923)
Q Consensus 529 ~ 529 (923)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
No 150
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=88.73 E-value=0.41 Score=49.73 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=54.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHH--HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t--A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
-++.|++.+.++.|++.|+++.++|...... ........|+.... + .++ +... ....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~-~s~~------------------~~~~ 151 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVV-ESCL------------------EGLR 151 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEE-Eeee------------------cCCC
Confidence 3578999999999999999999999865432 22222223332110 0 000 0000 0001
Q ss_pred ChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 570 FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 570 sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.|+-. ..+.+.+.-....++|+||...|+.+=++|++-
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 23221 222333332335588999999999999999874
No 151
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=88.28 E-value=1.2 Score=44.50 Aligned_cols=40 Identities=8% Similarity=-0.006 Sum_probs=31.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChH------------HHHHHHHHhCCC
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMG 533 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~------------tA~~ia~~~Gi~ 533 (923)
+-||+.++++.|+++|+++.++|.-... ....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999975431 345566777763
No 152
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=87.45 E-value=1.9 Score=43.10 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=71.6
Q ss_pred HHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC--EEEEEccC-------ChHHHHH
Q 002430 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIGKE 525 (923)
Q Consensus 455 ~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI--~v~mlTGD-------~~~tA~~ 525 (923)
+...|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+. +|.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888775433 11 113457788999999999999987 49999986 3678999
Q ss_pred HHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhC-----CCEEEEEcCCc-cChH
Q 002430 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGV-NDAP 599 (923)
Q Consensus 526 ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~-----g~~V~m~GDG~-NDap 599 (923)
+.+.+|+.. + .+..-.|.-..++.+.++.+ -+-++|+||-. -|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12234676667788888755 45699999963 3443
Q ss_pred h
Q 002430 600 A 600 (923)
Q Consensus 600 a 600 (923)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 3
No 153
>PLN02580 trehalose-phosphatase
Probab=86.67 E-value=1.2 Score=50.34 Aligned_cols=67 Identities=25% Similarity=0.232 Sum_probs=46.9
Q ss_pred EecChh---hHHHHHHHHhhC-C-----C-EEEEEcCCccChHhhhc-----CCeeeEeccchHHHhhccCEEecCCCch
Q 002430 567 AGVFPE---HKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 631 (923)
Q Consensus 567 ar~sP~---~K~~iV~~lq~~-g-----~-~V~m~GDG~NDapaLk~-----AdVGIamg~gtd~A~~aADivl~~~~~~ 631 (923)
-.+.|. +|..-|+.+-+. | . .+.++||+.||-.|++. +++||+|++|.+ ...|++.|.+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~--~t~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK--ESNAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC--CccceEEcCC--HH
Confidence 455553 898888877654 2 1 35899999999999995 689999987654 2367888854 34
Q ss_pred hHHHHH
Q 002430 632 VIISAV 637 (923)
Q Consensus 632 ~i~~~i 637 (923)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 444444
No 154
>PLN03017 trehalose-phosphatase
Probab=86.44 E-value=13 Score=42.05 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=33.8
Q ss_pred eEEEEeccCC--CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH
Q 002430 483 QLVGLLPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 527 (923)
Q Consensus 483 ~llG~i~i~D--~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia 527 (923)
+|+-++.-.| .+-++..++|++|. .|+.+.++||..........
T Consensus 121 TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 121 TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 4444443333 36789999999999 78999999999998888773
No 155
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=84.43 E-value=1.7 Score=44.62 Aligned_cols=95 Identities=12% Similarity=0.047 Sum_probs=54.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH-HHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
++.|++.++++.|++.|+++.++|.-+.......- +..++.... ..++...+ +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f--d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA--DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc--CEEEEecc-------------------cCCCCC
Confidence 47899999999999999999999987655433221 112321100 00000000 001122
Q ss_pred hhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCeee
Q 002430 572 EHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (923)
Q Consensus 572 ~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGI 608 (923)
.-. ..+.+.+.-...-+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 111 2233333333456899999999999999888853
No 156
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=83.98 E-value=1.5 Score=45.77 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=59.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++.| ++++.++|+.....+...=++.|+.... +...+.+.+.. ..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 4999999999887777776777775321 11111111000 0001111
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEe
Q 002430 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 573 ~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
-=....+.+.-...-|+|+||..+|..+=++|++-...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 11222223322234589999999999999999987653
No 157
>PHA02597 30.2 hypothetical protein; Provisional
Probab=83.69 E-value=1.9 Score=44.10 Aligned_cols=93 Identities=12% Similarity=0.125 Sum_probs=53.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. +. .. + ..+.++..+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 36899999999999985 56667764444433344556653110 00 00 0 0011111111
Q ss_pred hHHHHHH-HHhhCC-CEEEEEcCCccChHhhhcC--Ceee
Q 002430 573 HKYEIVK-RLQERK-HICGMTGDGVNDAPALKKA--DIGI 608 (923)
Q Consensus 573 ~K~~iV~-~lq~~g-~~V~m~GDG~NDapaLk~A--dVGI 608 (923)
|-+++. ++++.| ..++|+||..+|+.|-++| ++-.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 223332 333334 4578999999999999999 8854
No 158
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=83.40 E-value=7.5 Score=40.03 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=31.4
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
.+.+.+.+|+++|++|+..|--...--...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999988777667777788875
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=83.30 E-value=2.5 Score=46.97 Aligned_cols=47 Identities=19% Similarity=0.258 Sum_probs=38.9
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGM 532 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia---~~~Gi 532 (923)
|.+--.+.+=|++.++|++|++.|++++++|+....+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555555677799999999999999999999999977777777 45665
No 160
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=81.86 E-value=1.2 Score=40.43 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=36.1
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH---HHhCCC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia---~~~Gi~ 533 (923)
|++.-.+.+=|++.++|+.|+++|++++.+|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667788899999999999999999999998866655555 456664
No 161
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=81.26 E-value=3 Score=46.47 Aligned_cols=91 Identities=11% Similarity=0.069 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH----hCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~----~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar 568 (923)
++.+++.++++.|++.|+++.++|.-+...|..+-++ +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6653210 0111
Q ss_pred cChhhHHHHHHHH-hh---CCCEEEEEcCCccChHhhhcCCeeeEec
Q 002430 569 VFPEHKYEIVKRL-QE---RKHICGMTGDGVNDAPALKKADIGIAVA 611 (923)
Q Consensus 569 ~sP~~K~~iV~~l-q~---~g~~V~m~GDG~NDapaLk~AdVGIamg 611 (923)
..+.-|...++.+ ++ .-.-++|+||...|..+.+++..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2233344444333 22 2367899999999999999998887553
No 162
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=79.44 E-value=2 Score=43.54 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=59.1
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe---c
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---V 569 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar---~ 569 (923)
++.+++.+++++|+ .++.++|.-....+...-+++|+.... + .++...+ +-.+ .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~------------------~~~~~~~~ 140 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDT------------------ANPDYLLP 140 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeec------------------ccCccCCC
Confidence 36789999999997 479999998888888888888874311 1 1111000 0000 1
Q ss_pred ChhhH--HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 570 FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 570 sP~~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.|... ..+++.+......+.|+||...|+.+=++|++-
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 33221 233444444456688999999999888888764
No 163
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=76.84 E-value=3.6 Score=41.56 Aligned_cols=92 Identities=14% Similarity=0.112 Sum_probs=57.2
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhH
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K 574 (923)
-| ..++++.|++. +++.++||.....+..+-++.|+.... ..++ +.+.. -..+-.|+-=
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~-~~~~~----------------~~~KP~p~~~ 148 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVV-AADDV----------------QHHKPAPDTF 148 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEE-ehhhc----------------cCCCCChHHH
Confidence 34 46899999875 899999999999999888889985321 1111 11100 0011112211
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChHhhhcCCee
Q 002430 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 575 ~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVG 607 (923)
....+.++-....|.|+||..+|+.+=++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 233333333334588999999999999998764
No 164
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=71.62 E-value=8.6 Score=38.88 Aligned_cols=98 Identities=15% Similarity=0.196 Sum_probs=61.4
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh------cCeEE
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK------ADGFA 567 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~vfa 567 (923)
+.+++.+++..++++|.+++|+|- |-||....++...+... + .-..+.+.. ...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rgyf~~~~f~~~------~-~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRGYFTEADFDKL------H-NKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCccccCccHHHHHHH------H-HHHHHHHHHcCCccceEEEC
Confidence 468999999999999999999996 34555443332211100 0 001111111 11345
Q ss_pred ecChhh--------HHHHHHHHhhCC---CEEEEEcCCccChHhhhcCCeeeEe
Q 002430 568 GVFPEH--------KYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV 610 (923)
Q Consensus 568 r~sP~~--------K~~iV~~lq~~g---~~V~m~GDG~NDapaLk~AdVGIam 610 (923)
.-.|++ ...+.+.+++.+ ..-.||||-..|..+-..|+++ ++
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 555553 345666777654 5678999999999998888887 54
No 165
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=69.56 E-value=9.7 Score=40.24 Aligned_cols=89 Identities=21% Similarity=0.181 Sum_probs=53.9
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChH---HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~---tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
++=|++.+.++.+++.|++|..|||.+.. ....--++.|.... ....+.+.... . ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----~------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----S------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----S------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----c------------ccc
Confidence 44578999999999999999999997643 22223345665321 00011000000 0 000
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEEcCCccChHh
Q 002430 570 FPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (923)
Q Consensus 570 sP~~K~~iV~~lq~~g-~~V~m~GDG~NDapa 600 (923)
..+-|...-+.++++| ++++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1234888888888885 578889999999776
No 166
>PRK10444 UMP phosphatase; Provisional
Probab=68.13 E-value=5.8 Score=42.47 Aligned_cols=45 Identities=22% Similarity=0.333 Sum_probs=40.1
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~ 530 (923)
|.+.-.+.+-|++.++|+.|++.|++++.+||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888888775
No 167
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=67.17 E-value=11 Score=38.42 Aligned_cols=47 Identities=23% Similarity=0.314 Sum_probs=41.4
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH
Q 002430 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 483 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~ 529 (923)
.+-|.+.++|..=|++.|++++|++++.+|+-+|.-..+.-+.+.++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHH
Confidence 56799999999999999999999999999999998877766666654
No 168
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=66.86 E-value=15 Score=38.18 Aligned_cols=41 Identities=15% Similarity=0.211 Sum_probs=34.0
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 534 (923)
++-+++.++++++++. .++.++|--....+....+++||.+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 4567889999999988 9999999877777788888999643
No 169
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=66.33 E-value=9.6 Score=41.46 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.3
Q ss_pred CC-ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002430 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (923)
Q Consensus 494 lr-~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 534 (923)
+| |++.+++++|+++|+++.+.|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999888888888899999964
No 170
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=66.21 E-value=7.8 Score=41.69 Aligned_cols=48 Identities=25% Similarity=0.379 Sum_probs=36.5
Q ss_pred EEeccCCC----CCccHHHHHHHHHhCCCEEEEEccCChHHHHHH---HHHhCCC
Q 002430 486 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMG 533 (923)
Q Consensus 486 G~i~i~D~----lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~i---a~~~Gi~ 533 (923)
|.+.-.+. +=|++.++|++|++.|+++.++||....+...+ -+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 788999999999999999999999876654333 3445653
No 171
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=65.48 E-value=10 Score=41.26 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.1
Q ss_pred CC-ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCC
Q 002430 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (923)
Q Consensus 494 lr-~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~ 534 (923)
+| |++.+++++|+++|+++.++|+-....+...-+++|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 899999999999999999999777777788999999853
No 172
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=63.61 E-value=92 Score=39.17 Aligned_cols=193 Identities=16% Similarity=0.089 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe-cCCeEEEec
Q 002430 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKIDQS 184 (923)
Q Consensus 106 ~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~-g~~~~Vdes 184 (923)
+++++..+...+.-++..++.+++.++...... +.. -++-|....+...|.+|-|.++++ |+.+-+|=-
T Consensus 60 ~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~-----~~~-----V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ 129 (755)
T TIGR01647 60 IILGLLLLNATIGFIEENKAGNAVEALKQSLAP-----KAR-----VLRDGKWQEIPASELVPGDVVRLKIGDIVPADCR 129 (755)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCC-----eEE-----EEECCEEEEEEhhhCcCCCEEEECCCCEEeceEE
Confidence 333444444555666666777777654332211 111 123588889999999999999995 444556666
Q ss_pred cccCCCcceecCC--CCc----ccccceeecCeEEEEEEEecchhhHHhH---HhhhhccCCCCcHHHHHHHHHHHHHHH
Q 002430 185 ALTGESLPVTKNP--YDE----VFSGSTCKQGEIEAVVIATGVHTFFGKA---AHLVDSTNQVGHFQKVLTAIGNFCICS 255 (923)
Q Consensus 185 ~LTGEs~pv~K~~--~~~----v~~Gt~v~~G~~~~~V~~tG~~T~~g~i---~~l~~~~~~~~~~~~~~~~i~~~~~~~ 255 (923)
.+.|+..-+.-+. |+. -..|..+..|+...-=..++.-+..|.- .++.+.-++..+-...+.+....+...
T Consensus 130 vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~ 209 (755)
T TIGR01647 130 LFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLF 209 (755)
T ss_pred EEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHH
Confidence 6666644443321 332 1356666666643322222222222211 111111112221111233333222222
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhh
Q 002430 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308 (923)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~ 308 (923)
++.+.++..++.+..+.......+...+...++..-.+.|.+++++...+...
T Consensus 210 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 210 LIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 22222222222222221112234555667777778888999999998887654
No 173
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=61.53 E-value=39 Score=33.41 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=66.3
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHH---HHHh-----CCCCCCCCCCcccCcccccccCcchHHHHhhhc
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~i---a~~~-----Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 563 (923)
|..++++.+..+++++.|.+++-+|+....-|..+ -.+. +++.. .++. +...+-..+. -
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~--------sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLL--------SPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEE--------CCcchhhhhh-c
Confidence 78999999999999999999999999985444322 2222 33221 1110 1011111110 1
Q ss_pred CeEEecChhhHHHHHHHHhhC-----CCEEEEEcCCccChHhhhcCCee
Q 002430 564 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 607 (923)
Q Consensus 564 ~vfar~sP~~K~~iV~~lq~~-----g~~V~m~GDG~NDapaLk~AdVG 607 (923)
.+..+-.-+.|....+.++.. ...++..|...+|+.|-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 133444456899999988863 46788899999999999877653
No 174
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=61.43 E-value=63 Score=41.77 Aligned_cols=21 Identities=24% Similarity=0.256 Sum_probs=12.4
Q ss_pred CCeEEEEeCCCCCCCcEEEEe
Q 002430 142 DGRWSEQDASILVPGDVISIK 162 (923)
Q Consensus 142 dg~~~~i~~~~Lv~GDiV~l~ 162 (923)
-|....+...|.+|.|.+.++
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~ 206 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFIS 206 (941)
T ss_pred CCCEEEECCCCEecccEEEEE
Confidence 355556666666666666554
No 175
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=60.69 E-value=15 Score=39.34 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=37.8
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEcc---CChHHHHHHHHHhCCC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~tA~~ia~~~Gi~ 533 (923)
|.+.-.+.+=|++.++|++|++.|++++.+|| .........-+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555666778999999999999999999997 4566666666777764
No 176
>PLN02151 trehalose-phosphatase
Probab=59.74 E-value=1.2e+02 Score=34.28 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=41.5
Q ss_pred hHHHHHHHHhhC-C------CEEEEEcCCccChHhhhcC-----CeeeEeccchHHHhhccCEEecCCCchhHHHHH
Q 002430 573 HKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (923)
Q Consensus 573 ~K~~iV~~lq~~-g------~~V~m~GDG~NDapaLk~A-----dVGIamg~gtd~A~~aADivl~~~~~~~i~~~i 637 (923)
+|-..|+.+.+. + ..+.++||-..|-.|++.. ++||-++.+.. ...|++.|.+ -..+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHH
Confidence 898888887654 2 2589999999999998753 56777763321 2368888854 34444444
No 177
>PLN02423 phosphomannomutase
Probab=59.64 E-value=13 Score=39.58 Aligned_cols=43 Identities=26% Similarity=0.255 Sum_probs=36.0
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccChHhhhc-CCeeeEeccchH
Q 002430 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 615 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GD----G~NDapaLk~-AdVGIamg~gtd 615 (923)
-+|..-++.|+ ...-|++.|| |-||.+||+. -=.||.+.+-.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37999999999 6677899999 8999999997 778999864333
No 178
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=58.78 E-value=52 Score=35.54 Aligned_cols=88 Identities=20% Similarity=0.271 Sum_probs=51.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChH----HHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeE
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~----tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 566 (923)
+.|+=|++.+..+.+++.|++|..+||.... |..+. ++.|.... +.+.-+...+ ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~----~~LiLR~~~D----~~----------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW----EKLILKDPQD----NS----------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc----ceeeecCCCC----Cc-----------
Confidence 3566789999999999999999999999853 33333 23565421 1111000000 00
Q ss_pred EecChhhHHHHHHHHhhCC-CEEEEEcCCccCh
Q 002430 567 AGVFPEHKYEIVKRLQERK-HICGMTGDGVNDA 598 (923)
Q Consensus 567 ar~sP~~K~~iV~~lq~~g-~~V~m~GDG~NDa 598 (923)
..-..+-|...=+.+.+.| .+++.+||--+|-
T Consensus 203 ~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 203 AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred cchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0001233544445555565 5778899998885
No 179
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=58.24 E-value=34 Score=40.51 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=70.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHH-hCCCCCCCCCCcccCcccc----cccCcchHHHHhhhcCeEEe
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQDKD----ASIAALPVDELIEKADGFAG 568 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~-~Gi~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~vfar 568 (923)
+++++.+ .+++.|- ++++|+=....+..+|++ +|+.. +.|.+.+ ...++. +. .-..
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~-------VIgTeLev~~~G~~TG~-----i~---g~~~ 171 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADK-------VLGTELEVSKSGRATGF-----MK---KPGV 171 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCE-------EEecccEECcCCEEeee-----ec---CCCC
Confidence 5555444 4456775 499999999999999987 89852 1111111 000000 00 0001
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccch--HHHh--hccCEEecCCCchhHH
Q 002430 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADAT--DAAR--SASDIVLTEPGLSVII 634 (923)
Q Consensus 569 ~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gt--d~A~--~aADivl~~~~~~~i~ 634 (923)
+.=++|.+-++.........-+-||..||.|+|+.||-+.+++... ...+ --.-+|..|.++...+
T Consensus 172 c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~~~p 241 (497)
T PLN02177 172 LVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLVQRP 241 (497)
T ss_pred CccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCcccCCC
Confidence 2346788777643321122258899999999999999999997411 1111 1234555555554444
No 180
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=57.69 E-value=15 Score=39.00 Aligned_cols=91 Identities=12% Similarity=0.087 Sum_probs=52.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++-||+.++++.|++. +++.++|.-+... +..|+..-. + .++ +.+. +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f-d-~i~-~~~~------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF-E-FVL-RAGP------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh-c-eeE-eccc------------------CCcCCCc
Confidence 4568999999999975 8999999865431 456653210 0 011 1000 1111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCC-ccChHhhhcCCeeeEe
Q 002430 573 HK--YEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV 610 (923)
Q Consensus 573 ~K--~~iV~~lq~~g~~V~m~GDG-~NDapaLk~AdVGIam 610 (923)
-. ....+.+.-...-+.||||. ..|+.+=++|++-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11 11222232234569999999 5999999988875443
No 181
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=57.50 E-value=8.2 Score=38.39 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=37.6
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
.=..||++.+.++.|++. .++.+.|--....|..+...++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 335899999999999988 999999999999999999998864
No 182
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=57.42 E-value=21 Score=37.40 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=68.6
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecCh
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP 571 (923)
.++.||+.+.++.|++.|+.+.+.|+-....+..+-+..|+.... ...+.+.+.. -..-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 468899999999999999999999999988899999999986421 1111111110 001223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeE
Q 002430 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (923)
Q Consensus 572 ~~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIa 609 (923)
+-=+.-.+.|.-....|..+.|..|.+.|-++|+.-+=
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 33334444443345568899999999999999986543
No 183
>PTZ00445 p36-lilke protein; Provisional
Probab=55.74 E-value=24 Score=36.53 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEE--EeccCCC----------CCccHHHHHHHHHhCCCEE
Q 002430 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG--LLPLFDP----------PRHDSAETIRRALNLGVNV 512 (923)
Q Consensus 445 ~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG--~i~i~D~----------lr~~~~~~I~~l~~aGI~v 512 (923)
.+.....++.+.+.|.|++++-... ++++ .=+--+| ++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3455666778889999999876543 3332 0012233 7999999999999999999
Q ss_pred EEEccCCh
Q 002430 513 KMITGDQL 520 (923)
Q Consensus 513 ~mlTGD~~ 520 (923)
.++|=-..
T Consensus 95 ~VVTfSd~ 102 (219)
T PTZ00445 95 SVVTFSDK 102 (219)
T ss_pred EEEEccch
Confidence 99995443
No 184
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=54.53 E-value=15 Score=36.52 Aligned_cols=84 Identities=13% Similarity=0.090 Sum_probs=50.6
Q ss_pred CCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh
Q 002430 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (923)
Q Consensus 493 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~ 572 (923)
++.||+.++++ ++.++|.-+.......-+++|+.... ..++.+.+ .....|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-------------------~~~~KP~ 141 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDT-------------------VRAYKPD 141 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhh-------------------cCCCCCC
Confidence 57899999998 36788988887777788888874311 01111100 0111222
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChHhhhcC
Q 002430 573 HK--YEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (923)
Q Consensus 573 ~K--~~iV~~lq~~g~~V~m~GDG~NDapaLk~A 604 (923)
-. ....+.+.-....+.||||...|+.+-++|
T Consensus 142 p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 22 333444433345699999999998776553
No 185
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=54.46 E-value=1.3e+02 Score=38.88 Aligned_cols=270 Identities=16% Similarity=0.083 Sum_probs=147.3
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCCCCc
Q 002430 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPD 97 (923)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~ 97 (923)
..-++.+|+.+++... .+.+..++-.....+ ++.+|...|...+...-.+.+.+....... .+
T Consensus 42 ~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 42 TTGLSEEEVKRRLKKYGPNELPEEKKRSLLKK------------FLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred ccCCCHHHHHHHHhhcCCccccccccCcHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 4456678888777643 344443333333333 333444434434433334444444432111 14
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcE------E----EEeCCeEEEEeCCCCCCCcEEEEeCCCee
Q 002430 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT------K----VLRDGRWSEQDASILVPGDVISIKLGDIV 167 (923)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~------~----V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~I 167 (923)
+...+.++++..+...+.-++..++-++++++......-- . -+.-|....+.+.|.+|-|...|+..+ .
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-L 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-c
Confidence 4444555555556668888898888888888766543321 1 124588899999999999999999877 4
Q ss_pred ccceEEEecCCeEEEeccc--cCCCccee---c---CCCCcccccceeecCeEEEEEEEecchhhHHhHHhhhhccCCCC
Q 002430 168 PADARLLEGDPLKIDQSAL--TGESLPVT---K---NPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (923)
Q Consensus 168 PaD~~ll~g~~~~Vdes~L--TGEs~pv~---K---~~~~~v~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~l~~~~~~~~ 239 (923)
=+|=-.|.|++.-|+--.. ++|..|.. + -.|..+.+|+-..--...|.-+.-|..+..-...+. ..+.-..
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~-~~t~l~~ 263 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE-VKTPLQR 263 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc-cCCcHHH
Confidence 4555555554433322211 22333332 3 347777777743333345555666665544322211 1122122
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHHHHHH
Q 002430 240 HFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (923)
Q Consensus 240 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~ 306 (923)
.+.+....+..++++..++..+..++.....+...+..++.-++++.--+.|..+-+++.+....-+
T Consensus 264 ~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 264 KLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 3445555555554444433333333321221334566777788888888888888888888766544
No 186
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=53.68 E-value=25 Score=35.03 Aligned_cols=90 Identities=28% Similarity=0.399 Sum_probs=60.9
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCCh----HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEec
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~ 569 (923)
|++=+++.|..-++.|=++..+||..+ .+++..|+...|. ++.+ .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCcc-------------------------eeeccC
Confidence 567788899999999999999999875 3456666666662 2211 134444
Q ss_pred Chh-hHHHHHHHHhhCCCEEEEEcCCccChHhhhcCCe-eeEe
Q 002430 570 FPE-HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (923)
Q Consensus 570 sP~-~K~~iV~~lq~~g~~V~m~GDG~NDapaLk~AdV-GIam 610 (923)
.|. .+..-...+|+++ +-..-||.-||.-|-|+|.+ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 441 2233345667666 34578999999999999876 5544
No 187
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.91 E-value=53 Score=36.13 Aligned_cols=137 Identities=15% Similarity=0.159 Sum_probs=75.7
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCCCCCCC--C-----------------c
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGTNMYPS--S-----------------S 541 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~~~~~~--~-----------------~ 541 (923)
+.++++++.++.|+.+++.|++ ..++-||+++.. ...|+++||......- . .
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 4567788899999999888876 355668887654 3456778885321100 0 0
Q ss_pred ccC----cccc------------------cccCcchHHHHhhhcCeEEecChhhHHHHHHHHhh--CCCEEEEEcCC-cc
Q 002430 542 LLG----QDKD------------------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG-VN 596 (923)
Q Consensus 542 l~~----~~~~------------------~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~V~m~GDG-~N 596 (923)
+.| .+.. +.++...+.++...-..|.-+||.-=.++++...- .|..|+++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 000 0000 01111122223222233555666655555555432 38999999997 44
Q ss_pred ChH---hhhcCCeeeEec---cc--hHHHhhccCEEecC
Q 002430 597 DAP---ALKKADIGIAVA---DA--TDAARSASDIVLTE 627 (923)
Q Consensus 597 Dap---aLk~AdVGIamg---~g--td~A~~aADivl~~ 627 (923)
=.| .|.+++.-+.+- .. .++++ .||+|++-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~-~ADIVIsa 209 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCR-QADIVVAA 209 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHh-cCCEEEEe
Confidence 444 456666666652 11 22344 78999864
No 188
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=50.15 E-value=19 Score=38.78 Aligned_cols=118 Identities=15% Similarity=0.141 Sum_probs=64.3
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhh-----cCeEEecC
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK-----ADGFAGVF 570 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~vfar~s 570 (923)
++..++++.|++.|.++.+.|+.............|+. .+-..+.. ..++..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCCC
Confidence 67888999999999999999886643322222112211 11111110 11122222
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-cChHhhhcCCeeeE-eccch----H--HHhhccCEEecCCCchhHHHH
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIA-VADAT----D--AARSASDIVLTEPGLSVIISA 636 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~-NDapaLk~AdVGIa-mg~gt----d--~A~~aADivl~~~~~~~i~~~ 636 (923)
|+-=..+.+.+.-....+.|+||.. +|+.+=+++++--. +..|. + .....+|+++ +++..+...
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 3222233344433446799999996 89999888877443 33331 1 1223467777 456666543
No 189
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=50.04 E-value=13 Score=34.61 Aligned_cols=79 Identities=23% Similarity=0.241 Sum_probs=45.4
Q ss_pred HHHHHHHHcCCeEEEEEeeecC--C-CCCCC---CCCCceEEEEeccCCCCCccHHHHHHHHHhCCCE-EEEEccCChHH
Q 002430 450 AVIDKFAERGLRSLGVARQEIP--E-KTKES---PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLAI 522 (923)
Q Consensus 450 ~~i~~~a~~GlR~l~~A~~~~~--~-~~~~~---~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~-v~mlTGD~~~t 522 (923)
..++.+.+.|+++..+.-+.-+ . .-+.. ...+..++=+. -+.+.+++.+++|.+.|++ +|+.+|...+.
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~----~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~ 93 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC----VPPDKVPEIVDEAAALGVKAVWLQPGAESEE 93 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-----S-HHHHHHHHHHHHHHT-SEEEE-TTS--HH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE----cCHHHHHHHHHHHHHcCCCEEEEEcchHHHH
Confidence 3455566689998877543310 0 00111 11222222111 2456889999999999996 99999999999
Q ss_pred HHHHHHHhCC
Q 002430 523 GKETGRRLGM 532 (923)
Q Consensus 523 A~~ia~~~Gi 532 (923)
+.+.|++.|+
T Consensus 94 ~~~~a~~~gi 103 (116)
T PF13380_consen 94 LIEAAREAGI 103 (116)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHHcCC
Confidence 9999999987
No 190
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=48.85 E-value=38 Score=40.38 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=31.5
Q ss_pred CCccHHHHHHHHHhCCCEEEEEccCCh------------HHHHHHHHHhCCC
Q 002430 494 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 533 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlTGD~~------------~tA~~ia~~~Gi~ 533 (923)
+-|+++++++.|++.|+++.++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 3356667777763
No 191
>COG5547 Small integral membrane protein [Function unknown]
Probab=48.47 E-value=94 Score=24.91 Aligned_cols=49 Identities=20% Similarity=0.407 Sum_probs=30.0
Q ss_pred HHHHHhhchHH--HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 002430 65 KFLGFMWNPLS--WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (923)
Q Consensus 65 ~~l~~~~~~~~--~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~~ 121 (923)
.|+++|+-|+. ++.++.|++-+.++ -|-. +.++++..+...++.+.+++
T Consensus 2 eflk~fkypIIgglvglliAili~t~G-------fwKt-ilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 2 EFLKKFKYPIIGGLVGLLIAILILTFG-------FWKT-ILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred cHHHHhccchHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 36788888875 33344444444443 4444 45556677788888887765
No 192
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=46.28 E-value=4e+02 Score=28.45 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=43.6
Q ss_pred CCCCceEEEEeccCCCCCccHHHHHHHHHhC---CCEEEEEccCChHHHHHHHHH
Q 002430 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 478 ~e~~l~llG~i~i~D~lr~~~~~~I~~l~~a---GI~v~mlTGD~~~tA~~ia~~ 529 (923)
...+|.=+=+++=.+-+.||..++|+.++.. |..|+-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3556666777777777899999999999999 999998888889999988764
No 193
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.71 E-value=75 Score=34.67 Aligned_cols=138 Identities=13% Similarity=0.195 Sum_probs=72.9
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCCCCCCCC-------------------
Q 002430 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYPSS------------------- 540 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~~Gi~~~~~~~~------------------- 540 (923)
+.+.+|++.++.++.+++. |++ ..++.||+++.. ...|+++||....+.-.
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 89 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDP 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456678888888888776 665 346678876543 45677788854211000
Q ss_pred cccC----ccccc------------------ccCcchHHHHhhhcCeEEecChhhHHHHHHHHhh--CCCEEEEEcC-Cc
Q 002430 541 SLLG----QDKDA------------------SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGD-GV 595 (923)
Q Consensus 541 ~l~~----~~~~~------------------~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~V~m~GD-G~ 595 (923)
.+.| .+... .++...+..+...-..|.-+||.-=.++++...- .|..++++|- |+
T Consensus 90 ~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~i 169 (284)
T PRK14179 90 TWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNI 169 (284)
T ss_pred CCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 0000 00000 0111122222222233556666655555554432 4899999999 55
Q ss_pred cChH---hhhcCCeeeEe--ccchH--HHhhccCEEecC
Q 002430 596 NDAP---ALKKADIGIAV--ADATD--AARSASDIVLTE 627 (923)
Q Consensus 596 NDap---aLk~AdVGIam--g~gtd--~A~~aADivl~~ 627 (923)
-=.| +|.+++.-+.+ +...+ ..-..||+++.-
T Consensus 170 vG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 170 VGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 5555 45566555555 22222 223479999863
No 194
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=45.16 E-value=68 Score=36.04 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=34.2
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh-C
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G 531 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~-G 531 (923)
-|++.+.+++|+++|+++.++|+-....+..+-+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999988886 6
No 195
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=45.16 E-value=23 Score=33.70 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.9
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHH
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 522 (923)
+++.+++.++++++++.|++++.+||.+...
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6788999999999999999999999998654
No 196
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=44.71 E-value=17 Score=24.62 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=13.4
Q ss_pred CCCCCHHHHHHHHhh
Q 002430 35 REGLTSDEGAHRLHV 49 (923)
Q Consensus 35 ~~GLs~~e~~~r~~~ 49 (923)
++|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999975
No 197
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=43.52 E-value=1.4e+02 Score=30.97 Aligned_cols=193 Identities=15% Similarity=0.137 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCC-eEEEecc
Q 002430 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSA 185 (923)
Q Consensus 107 ~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~-~~Vdes~ 185 (923)
++++..+..+++.+...++.+.+++....... +... -++-|....+...|.+|-|.++++.++ +-+|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~----v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKVT----VIRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEEE----EEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccEE----EEeccccccchHhhccceeeeecccccccccCccc
Confidence 45555666677777777777777765443322 2122 233478888999999999999886532 2223222
Q ss_pred cc-CCCcceecC--CCCc---------ccccceeecCeEEEEEEEecchhhHHhH---HhhhhccCCCCcHHHHHHHHHH
Q 002430 186 LT-GESLPVTKN--PYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGKA---AHLVDSTNQVGHFQKVLTAIGN 250 (923)
Q Consensus 186 LT-GEs~pv~K~--~~~~---------v~~Gt~v~~G~~~~~V~~tG~~T~~g~i---~~l~~~~~~~~~~~~~~~~i~~ 250 (923)
|. |... +.-. .|+. ...|..+..|+...-=...|.-+..|.- .++.+...+..+.....++...
T Consensus 73 l~~g~~~-vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 73 LESGSAY-VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EESSEEE-EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred eeccccc-cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 32 2111 1100 0211 1267777777643311122222333321 1222222344443344444444
Q ss_pred HHHHHHHHHHHHHHHHHHhcccc-chHHHHHHHHHHHHhhccCchhHHHHHHHHHHHhhh
Q 002430 251 FCICSIAVGIVAEIIIMYPVQHR-KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309 (923)
Q Consensus 251 ~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~~~l 309 (923)
.+...+....++..+..+..+.. .....+...+...+..+=...|.++++++..+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHH
Confidence 43333333233323333322221 122334455556666677778888888887776543
No 198
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=43.32 E-value=13 Score=32.43 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=16.9
Q ss_pred EeCCCCCCCcEEEE-eCCCeecc
Q 002430 148 QDASILVPGDVISI-KLGDIVPA 169 (923)
Q Consensus 148 i~~~~Lv~GDiV~l-~~Gd~IPa 169 (923)
+.-.+|.+||.|.+ ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 44578999999998 79999996
No 199
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=42.94 E-value=29 Score=37.52 Aligned_cols=47 Identities=23% Similarity=0.235 Sum_probs=40.5
Q ss_pred EEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHh
Q 002430 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (923)
Q Consensus 484 llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~ 530 (923)
+=|.+.--+.+=|++.++|++|+++|++++.+|--...+....++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34788888889999999999999999999999999888887666554
No 200
>PRK00208 thiG thiazole synthase; Reviewed
Probab=42.66 E-value=4.5e+02 Score=28.07 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=43.6
Q ss_pred CCCCceEEEEeccCCCCCccHHHHHHHHHhC---CCEEEEEccCChHHHHHHHHH
Q 002430 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 478 ~e~~l~llG~i~i~D~lr~~~~~~I~~l~~a---GI~v~mlTGD~~~tA~~ia~~ 529 (923)
.+.+|.=+=+++=.+-+.||..++++.++.. |..|+=.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 89 LGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred hCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 4567777777777777899999999999999 999997788888888888754
No 201
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.56 E-value=81 Score=34.67 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=30.7
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.++++++.++.++.+++. |++ +.++-||++... ...|+++||..
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~ 64 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMAS 64 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888888876 765 355568776543 45677888853
No 202
>PRK11507 ribosome-associated protein; Provisional
Probab=42.48 E-value=29 Score=29.27 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=23.4
Q ss_pred EEEeCCeEEEEeCCCCCCCcEEEEeC
Q 002430 138 KVLRDGRWSEQDASILVPGDVISIKL 163 (923)
Q Consensus 138 ~V~Rdg~~~~i~~~~Lv~GDiV~l~~ 163 (923)
.|..||+...-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 67889999999999999999999854
No 203
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=41.98 E-value=1.6e+02 Score=32.79 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=44.4
Q ss_pred CCCCceEEEEeccCCCCCccHHHHHHHHHhC---CCEEEEEccCChHHHHHHHHH
Q 002430 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (923)
Q Consensus 478 ~e~~l~llG~i~i~D~lr~~~~~~I~~l~~a---GI~v~mlTGD~~~tA~~ia~~ 529 (923)
...+|.=+=+++=..-+-||..++++.++.. |..|...+-|++.+|++++.-
T Consensus 163 ~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 163 GGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred cCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 4567777777777777889999999999999 999999999999999988864
No 204
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=41.17 E-value=30 Score=37.62 Aligned_cols=48 Identities=23% Similarity=0.222 Sum_probs=35.6
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHH---HHHhCCC
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET---GRRLGMG 533 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~i---a~~~Gi~ 533 (923)
|.+.-.+.+=|++.++|++|++.|+++..+||....+.... -+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45555677788999999999999999999999764433332 2456764
No 205
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=40.87 E-value=51 Score=31.84 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=28.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHH
Q 002430 785 IERPGLLLATAFVIAQLVATFIAVYANWSFARIEGCGWGWAGVIWLYSLVTYFPLD 840 (923)
Q Consensus 785 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (923)
.++| +|++++.++.+....+..|. +..+.+|.|.++++++.+..+++.+
T Consensus 33 ~~HP--~L~~~M~~~y~~~~~lm~~s-----py~G~~s~~~ftv~fv~m~~~llfD 81 (155)
T PF10777_consen 33 RNHP--YLCLAMYAAYLAVAALMYYS-----PYFGLGSVWGFTVFFVVMAAFLLFD 81 (155)
T ss_pred HhCc--HHHHHHHHHHHHHHHHHHhc-----chhhhHHHHHHHHHHHHHHHHHHhh
Confidence 3456 77788887766544444442 2234466666665555555555555
No 206
>PTZ00174 phosphomannomutase; Provisional
Probab=40.82 E-value=37 Score=36.14 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=31.8
Q ss_pred EEeccCC-CCCccHHHHHHHHHhCCCEEEEEccCChHHHHH
Q 002430 486 GLLPLFD-PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 525 (923)
Q Consensus 486 G~i~i~D-~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ 525 (923)
|.+.=.| ++-+.+.++|+++++.|+++++.||.+......
T Consensus 14 GTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~ 54 (247)
T PTZ00174 14 GTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKE 54 (247)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 4444344 477889999999999999999999999875543
No 207
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=39.30 E-value=1.1e+02 Score=32.84 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=27.0
Q ss_pred cCCCCCccHHHHHHHHHhCCCEEE-EEccCCh-HHHHHHHHHh
Q 002430 490 LFDPPRHDSAETIRRALNLGVNVK-MITGDQL-AIGKETGRRL 530 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v~-mlTGD~~-~tA~~ia~~~ 530 (923)
+-|-+-++..+.++.+++.|++.. +++=... +....+++..
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 335555788889999999998844 5555443 4455666654
No 208
>PLN02591 tryptophan synthase
Probab=38.90 E-value=1.5e+02 Score=31.88 Aligned_cols=82 Identities=16% Similarity=0.170 Sum_probs=46.5
Q ss_pred CCccHHHHHHHHHhCCCE-EEEEccCCh-HHHHHHHHHh-CCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecC
Q 002430 494 PRHDSAETIRRALNLGVN-VKMITGDQL-AIGKETGRRL-GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~-v~mlTGD~~-~tA~~ia~~~-Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~s 570 (923)
|=++..+..+.|++.|+. |.++|-... +..+.+++.. |..- .....-++|... -.
T Consensus 116 P~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY-~Vs~~GvTG~~~---------------------~~ 173 (250)
T PLN02591 116 PLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY-LVSSTGVTGARA---------------------SV 173 (250)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE-EeeCCCCcCCCc---------------------CC
Confidence 337788888888888886 555545543 4556666654 2210 000111122110 12
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccC
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVND 597 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~ND 597 (923)
|++=.+.++.+|+....-.++|=|+++
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~ 200 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISK 200 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCC
Confidence 555567788888765566678999884
No 209
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=38.51 E-value=9.9e+02 Score=30.87 Aligned_cols=136 Identities=13% Similarity=0.110 Sum_probs=67.7
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc-------ccc--cc--c--c-CccccCCCHHHHHHHHHHHHHH
Q 002430 704 PQPDSWKLKEIFATGVVLGSYLAIMTVVFFWL-MRKT-------DFF--SD--A--F-GVRSLRTRPDEMMAALYLQVSI 768 (923)
Q Consensus 704 ~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~-------~~~--~~--~--~-g~~~~~~~~~~~~t~~f~~~~~ 768 (923)
+.-.++...+++..++++++...+..++.++. .... ++. .. . + +.. ....-...++++.++..
T Consensus 762 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~t~~f~~~v~~q~~~ 839 (917)
T TIGR01116 762 PLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQ--PARTISLSVLVVIEMFN 839 (917)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccccccccccccccccccc--chHHHHHHHHHHHHHHH
Confidence 45566777788888888887743333233321 1100 000 00 0 0 110 11233455666666555
Q ss_pred HHHHHhhhhccC--CCCcccchhHHHHHHHHHHHHHHHHHH-HhhcccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 002430 769 ISQALIFVTRSR--SWSFIERPGLLLATAFVIAQLVATFIA-VYANWSFARIEGCGWGWAGVIWLYSLVTYFPLDIL 842 (923)
Q Consensus 769 ~~~~~~~~~r~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (923)
..+..-. .++. ...|.++..++.++..++.+++.++++ +-..++..++....|.+.+.+.+..+++.-+.-++
T Consensus 840 ~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 915 (917)
T TIGR01116 840 ALNALSE-DQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFF 915 (917)
T ss_pred HHHHcCC-cccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444331 2221 122455555555555555555544432 23335667778889987777777766665554443
No 210
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.12 E-value=1e+02 Score=33.78 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=31.8
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.+++|++.++-++.+++. |++ +.++.||+++.. ...|+++||..
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888988877 665 466778886543 45677888854
No 211
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=37.70 E-value=1.3e+02 Score=32.01 Aligned_cols=134 Identities=16% Similarity=0.152 Sum_probs=67.1
Q ss_pred CCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEe--c
Q 002430 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (923)
Q Consensus 492 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar--~ 569 (923)
-.+|+++.+.++.|++.+|.+.+.|+-=-....++=++-|...+. -.+...-..-.-++ ....|-. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~g--------~l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDEDG--------VLVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TTS--------BEEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCcc--------eEeecCCCce
Confidence 358999999999999999999999976666666666666653321 11111000000000 0000000 0
Q ss_pred ChhhHHH-------HHHHHhhCCCEEEEEcCCccChHhhhcC---CeeeEec--c-c----hHHHhhccCEEecCCCchh
Q 002430 570 FPEHKYE-------IVKRLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPGLSV 632 (923)
Q Consensus 570 sP~~K~~-------iV~~lq~~g~~V~m~GDG~NDapaLk~A---dVGIamg--~-g----td~A~~aADivl~~~~~~~ 632 (923)
-+-.|-. .-+.++. ...|...||..-|+.|-.-. +.-+.+| + . -+.=+++=||||.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0111211 1223333 34688999999999998655 4444444 2 2 2234678999999987555
Q ss_pred HHHHH
Q 002430 633 IISAV 637 (923)
Q Consensus 633 i~~~i 637 (923)
++.+|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66555
No 212
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=36.85 E-value=21 Score=29.70 Aligned_cols=24 Identities=33% Similarity=0.536 Sum_probs=14.1
Q ss_pred EEEeCCeEEEEeCCCCCCCcEEEE
Q 002430 138 KVLRDGRWSEQDASILVPGDVISI 161 (923)
Q Consensus 138 ~V~Rdg~~~~i~~~~Lv~GDiV~l 161 (923)
.|..||+...-.-+.|.|||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 467799999999999999999999
No 213
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=36.83 E-value=1.1e+03 Score=30.97 Aligned_cols=214 Identities=15% Similarity=0.177 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe---cCCeE
Q 002430 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE---GDPLK 180 (923)
Q Consensus 104 i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~---g~~~~ 180 (923)
-++++++..+.....-++.+++.++|++ +.. ......| ++-|....+...|.+|-|.++++ |+.+-
T Consensus 196 ~~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iP 264 (1054)
T TIGR01657 196 SLCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMP 264 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEec
Confidence 3445555566666777777787777654 221 1122222 34588999999999999999997 55566
Q ss_pred EEeccccCCCcceecC--CCCc--ccc--------c------------ceeecCeEEEEEEEe-cchhhHHhHHhhhhcc
Q 002430 181 IDQSALTGESLPVTKN--PYDE--VFS--------G------------STCKQGEIEAVVIAT-GVHTFFGKAAHLVDST 235 (923)
Q Consensus 181 Vdes~LTGEs~pv~K~--~~~~--v~~--------G------------t~v~~G~~~~~V~~t-G~~T~~g~i~~l~~~~ 235 (923)
+|=-.+.|+ .-|.=. .|+. +.. | ..+..|.....+... |..+.. ..+-..
T Consensus 265 aD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~----~vV~~T 339 (1054)
T TIGR01657 265 CDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCL----AIVVRT 339 (1054)
T ss_pred ceEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEE----EEEEeC
Confidence 676677774 222211 1321 111 1 113334333222111 111111 112111
Q ss_pred ---CCCCcHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCchhHHHHHHH
Q 002430 236 ---NQVGHFQK----------VLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (923)
Q Consensus 236 ---~~~~~~~~----------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~iP~~L~~~~~~~~ 302 (923)
...+.+.+ ..++-...++..++++.++.+++.+. ........+...+...+..+=.+.|.++++++
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDGRPLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHhhcCchHHHHH
Confidence 12222222 22333222333222222222222221 11111123334455556667788899999999
Q ss_pred HHHHhhhhcCCceeccCchhhhccCceEEEecCCCccccCccee
Q 002430 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV 346 (923)
Q Consensus 303 ~~~~~~l~~~~ilvk~~~~~E~lg~v~~i~~DKTGTLT~n~m~v 346 (923)
.++... +.-.|.+-.++|.+-.---|-|+.++
T Consensus 419 ti~l~~------------~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 419 SIGINN------------SLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHHHH------------HHHHHHHCCEEEcCcccceecceeeE
Confidence 988643 35566777888888877777777665
No 214
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=35.22 E-value=66 Score=39.00 Aligned_cols=67 Identities=22% Similarity=0.275 Sum_probs=43.5
Q ss_pred EeCCCCCCCcEEEE-eCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCeEEEEEEEecchh
Q 002430 148 QDASILVPGDVISI-KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHT 223 (923)
Q Consensus 148 i~~~~Lv~GDiV~l-~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~~~~~V~~tG~~T 223 (923)
|.-.||.+||-|.| ++||+||-=. .|...-=+|+..|.. -|...-..||.+...+..+..-.++...
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~--------~Vv~e~R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~~ 430 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVV--------GVVLEKRPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGLN 430 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCccee--------eeecccCCCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCCC
Confidence 34589999999999 6999999622 223333345555544 4444557888888866556666666443
No 215
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=35.13 E-value=1.9e+02 Score=34.37 Aligned_cols=147 Identities=18% Similarity=0.136 Sum_probs=81.9
Q ss_pred eCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEecCCeEEEeccccCCCcceecCCCCcccccceeecCe---------
Q 002430 141 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGE--------- 211 (923)
Q Consensus 141 Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~~~~v~~Gt~v~~G~--------- 211 (923)
+-|....+...|.+|-|.+.++. ..=+|--.+.|++.-+.-.. |+. -..|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 45788889999999999998865 34455555666543333321 443 24677788888654322
Q ss_pred EEEEEEEecchhhHHhHHhhhhccCCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-h--ccccchHHHHHHHHHHHH
Q 002430 212 IEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL-TAIGNFCICSIAVGIVAEIIIMY-P--VQHRKYRDGIDNLLVLLI 287 (923)
Q Consensus 212 ~~~~V~~tG~~T~~g~i~~l~~~~~~~~~~~~~~-~~i~~~~~~~i~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~lli 287 (923)
..+.++++|.+|.- .-.....+.. ..+..+.+.+.++ .++.+...+ . .+...+..++..++...-
T Consensus 125 ~i~~~v~~~~~~k~----------~~~~~~~~~~~~~~~~~~~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P 193 (499)
T TIGR01494 125 KIAVVVYTGFETKT----------PLQPKLDRLSDIIFILFVLLIALA-VFLFWAIGLWDPNSIFKIFLRALILLVIAIP 193 (499)
T ss_pred HHHHHHHhcCCCCC----------chHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcccccHHHHHHHHHHHHHHhcC
Confidence 22344566665521 1011222222 3333333222222 222222222 1 133456677778888888
Q ss_pred hhccCchhHHHHHHHHHHH
Q 002430 288 GGIPIAMPTVLSVTMAIGS 306 (923)
Q Consensus 288 ~~iP~~L~~~~~~~~~~~~ 306 (923)
+++|.++|++...+.....
T Consensus 194 ~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 194 IALPLAVTIALAVGDARLA 212 (499)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 8999999888888776554
No 216
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=35.13 E-value=2.9e+02 Score=25.39 Aligned_cols=46 Identities=11% Similarity=0.242 Sum_probs=23.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Q 002430 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (923)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rd 142 (923)
.|...+++++++++.-.+-+...+|+++..+++.+.+.+-.+|+--
T Consensus 17 ~~~~ll~lvii~~i~yf~~~RpqkK~~k~~~~~~~~Lk~Gd~VvT~ 62 (106)
T PRK05585 17 GLSSLLPLVVFFAIFYFLIIRPQQKRQKEHKKMLSSLAKGDEVVTN 62 (106)
T ss_pred cHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3444443333333333333344556666667777766666666553
No 217
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=34.64 E-value=5e+02 Score=33.38 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHhhccCchhHHHHHHHHHHH
Q 002430 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (923)
Q Consensus 275 ~~~~~~~~~~lli~~iP~~L~~~~~~~~~~~~ 306 (923)
+..++..+++.+-.+.|.++++++..+....+
T Consensus 275 ~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 275 FTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 34455556666667777777777777655443
No 218
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=34.18 E-value=3.8e+02 Score=33.27 Aligned_cols=82 Identities=17% Similarity=0.120 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCc-EEEEeCCCeeccceEEEe-
Q 002430 99 QDFVGIIVLLVINSTISFIEENNAG-NAAAALMANLAPKTKVLRDGRWSEQDASILVPGD-VISIKLGDIVPADARLLE- 175 (923)
Q Consensus 99 ~~~~~i~~~~~~~~~~~~~~e~~~~-~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GD-iV~l~~Gd~IPaD~~ll~- 175 (923)
...+.+.++++++.+++.+.|..++ ++.+++.++..... +-.-.. ++-|. ...+...+.+|-|.++++
T Consensus 63 ~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~----~~~a~v-----ir~g~~~~~V~~~eL~~GDiV~v~~ 133 (679)
T PRK01122 63 GFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK----DTFARK-----LREPGAAEEVPATELRKGDIVLVEA 133 (679)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCeEEE-----EECCCEEEEEEHHHcCCCCEEEEcC
Confidence 3556677888888888888777666 55555554333221 111222 23455 678999999999999995
Q ss_pred cCCeEEEeccccCC
Q 002430 176 GDPLKIDQSALTGE 189 (923)
Q Consensus 176 g~~~~Vdes~LTGE 189 (923)
|+.+-+|=-.+.|+
T Consensus 134 Gd~IPaDG~vieG~ 147 (679)
T PRK01122 134 GEIIPADGEVIEGV 147 (679)
T ss_pred CCEEEEEEEEEEcc
Confidence 44455666666664
No 219
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=33.54 E-value=2.3e+02 Score=34.58 Aligned_cols=27 Identities=19% Similarity=0.231 Sum_probs=13.4
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChH
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLA 521 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~ 521 (923)
|.|+..-+..+|+.+-...++.||..+
T Consensus 713 r~dah~eL~~lR~k~~~aLvi~G~Sl~ 739 (1051)
T KOG0210|consen 713 RGDAHNELNNLRRKTDCALVIDGESLE 739 (1051)
T ss_pred chHHHHHHHHhhcCCCcEEEEcCchHH
Confidence 444555555555555555555555443
No 220
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=33.45 E-value=74 Score=34.95 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=26.3
Q ss_pred ccHHHHHHHHHhCCCEEEEEccCChHHH-HHHHHHhCC
Q 002430 496 HDSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGM 532 (923)
Q Consensus 496 ~~~~~~I~~l~~aGI~v~mlTGD~~~tA-~~ia~~~Gi 532 (923)
+|+...-+.|+..|.+++++|......+ ++..+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 4566677788899999999997765443 445555555
No 221
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=33.37 E-value=8.8e+02 Score=31.13 Aligned_cols=20 Identities=30% Similarity=0.401 Sum_probs=9.9
Q ss_pred CeEEEEeCCCCCCCcEEEEe
Q 002430 143 GRWSEQDASILVPGDVISIK 162 (923)
Q Consensus 143 g~~~~i~~~~Lv~GDiV~l~ 162 (923)
|....+..-|.+|-|.+.++
T Consensus 152 GDiV~l~~Gd~VPaDg~li~ 171 (867)
T TIGR01524 152 GDLIELAAGDIIPADARVIS 171 (867)
T ss_pred CCEEEECCCCEEcccEEEEe
Confidence 44445555555555544443
No 222
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.45 E-value=1.5e+02 Score=32.40 Aligned_cols=138 Identities=12% Similarity=0.137 Sum_probs=75.0
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCCCCCC--CCc----------------
Q 002430 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYP--SSS---------------- 541 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~~Gi~~~~~~--~~~---------------- 541 (923)
+...+|++.++.|+.+++. |++ ..++.||++... ...|+++||....+. ...
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 88 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARP 88 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456678888889888876 775 456678887643 456778888542211 000
Q ss_pred -ccCc----cccc------------------ccCcchHHHHhhhcCeEEecChhhHHHHHHHHhh--CCCEEEEEcCCcc
Q 002430 542 -LLGQ----DKDA------------------SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN 596 (923)
Q Consensus 542 -l~~~----~~~~------------------~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~V~m~GDG~N 596 (923)
+.|- +... .++...+..+...-..|.-+||.-=.++++..+- .|..|.++|-+..
T Consensus 89 ~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~i 168 (286)
T PRK14184 89 DIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNI 168 (286)
T ss_pred cCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 0000 0000 0111122222222234556677755555555442 3899999999843
Q ss_pred ----ChHhhhc------CCeeeEeccchHH--HhhccCEEecC
Q 002430 597 ----DAPALKK------ADIGIAVADATDA--ARSASDIVLTE 627 (923)
Q Consensus 597 ----DapaLk~------AdVGIamg~gtd~--A~~aADivl~~ 627 (923)
=+-+|.+ |.|-++-....+. .-..||+++..
T Consensus 169 VG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 169 VGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred chHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 1234443 6666666543332 33589999853
No 223
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=31.98 E-value=23 Score=35.60 Aligned_cols=16 Identities=31% Similarity=0.194 Sum_probs=13.7
Q ss_pred EEecCCCccccCccee
Q 002430 331 LCSDKTGTLTLNKLTV 346 (923)
Q Consensus 331 i~~DKTGTLT~n~m~v 346 (923)
+|||.+||||.+.+.+
T Consensus 1 v~fD~DGTL~~~~~~f 16 (192)
T PF12710_consen 1 VIFDFDGTLTDSDSGF 16 (192)
T ss_dssp EEEESBTTTBSSHHHH
T ss_pred eEEecCcCeecCCCch
Confidence 6999999999998543
No 224
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=31.62 E-value=1.2e+02 Score=30.13 Aligned_cols=58 Identities=14% Similarity=0.198 Sum_probs=42.5
Q ss_pred CChhHHHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEccCC
Q 002430 440 CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 519 (923)
Q Consensus 440 ~~~~~~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~ 519 (923)
++-....-+..+++.++..|=-.++++... =-+.+..+++.+++.|++|+-+||.+
T Consensus 91 NDy~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~ 146 (176)
T COG0279 91 NDYGYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKD 146 (176)
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 344445566677888888886666665432 12588999999999999999999987
Q ss_pred hH
Q 002430 520 LA 521 (923)
Q Consensus 520 ~~ 521 (923)
-.
T Consensus 147 GG 148 (176)
T COG0279 147 GG 148 (176)
T ss_pred Cc
Confidence 53
No 225
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=31.37 E-value=82 Score=31.60 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=31.7
Q ss_pred CCccHHHHHHHHHhCCCEEEEEc-cCChHHHHHHHHHhCCC
Q 002430 494 PRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 533 (923)
Q Consensus 494 lr~~~~~~I~~l~~aGI~v~mlT-GD~~~tA~~ia~~~Gi~ 533 (923)
+-|++++.++.|++.|+++.+.| -|.+..|+++=+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 56899999999999999999999 58899999999999986
No 226
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=31.14 E-value=1.1e+03 Score=30.27 Aligned_cols=21 Identities=29% Similarity=0.381 Sum_probs=12.5
Q ss_pred CCeEEEEeCCCCCCCcEEEEe
Q 002430 142 DGRWSEQDASILVPGDVISIK 162 (923)
Q Consensus 142 dg~~~~i~~~~Lv~GDiV~l~ 162 (923)
-|....+..-|.+|-|.+.++
T Consensus 174 ~GDiV~l~~Gd~IPaDg~li~ 194 (903)
T PRK15122 174 PGDIVHLSAGDMIPADVRLIE 194 (903)
T ss_pred CCCEEEECCCCEEeeeEEEEE
Confidence 355566666666666665554
No 227
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=30.64 E-value=2.1 Score=50.32 Aligned_cols=180 Identities=11% Similarity=0.012 Sum_probs=111.8
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCEEEEEc------------------------cCC--hHHHHHH--HHHhCCCC
Q 002430 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT------------------------GDQ--LAIGKET--GRRLGMGT 534 (923)
Q Consensus 483 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlT------------------------GD~--~~tA~~i--a~~~Gi~~ 534 (923)
..+-+.--.+++++.+.++|+++.+.|.|-.=+. =|. ..+|..| |..+|...
T Consensus 432 qil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~V 511 (942)
T KOG0205|consen 432 QILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNV 511 (942)
T ss_pred HHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhcccee
Confidence 4455667788999999999999988887632221 121 1233333 33344322
Q ss_pred CCCCCCcc-----cCccc--------ccccCcchHHHHhhhcCeEEecChhhHHHHHHHHhhCCCEEEEEcCCccChHhh
Q 002430 535 NMYPSSSL-----LGQDK--------DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (923)
Q Consensus 535 ~~~~~~~l-----~~~~~--------~~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~~g~~V~m~GDG~NDapaL 601 (923)
.+.....+ +|... ...+-+...++-++...++.-+.|.|+..-|--.++.+.+..+.++|.++++..
T Consensus 512 kmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtg 591 (942)
T KOG0205|consen 512 KMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTG 591 (942)
T ss_pred eeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccC
Confidence 22111111 00000 001122233444455567777888888888888888888889999999999999
Q ss_pred hcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 002430 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662 (923)
Q Consensus 602 k~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~ 662 (923)
..+|=+.|+..+.....-+.+..-.+...+-+...-..|+.+...+....+|.-.+|..+.
T Consensus 592 dgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmknytiy 652 (942)
T KOG0205|consen 592 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (942)
T ss_pred CCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheee
Confidence 9888888886443333323333334444455556667899999999999999888886443
No 228
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=30.64 E-value=1.1e+02 Score=25.58 Aligned_cols=33 Identities=18% Similarity=0.071 Sum_probs=24.7
Q ss_pred CCcEEEEeCCeEEEEeC---CCCCCCcEEEEeCCCe
Q 002430 134 APKTKVLRDGRWSEQDA---SILVPGDVISIKLGDI 166 (923)
Q Consensus 134 ~~~~~V~Rdg~~~~i~~---~~Lv~GDiV~l~~Gd~ 166 (923)
...+.|-.+|..++++. .++.|||.|.+..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 45678888999999864 4578999999999843
No 229
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=30.62 E-value=60 Score=29.38 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=25.4
Q ss_pred cEEEEeCCeEEEEeCCCCCCCcEEEEeCCCee
Q 002430 136 KTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (923)
Q Consensus 136 ~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~I 167 (923)
.-+|.-||+.. -|++++++||+|.|.-|...
T Consensus 33 ~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 33 GGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 44677788876 89999999999999988654
No 230
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=30.39 E-value=2.5e+02 Score=28.07 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=64.5
Q ss_pred cHHHHHHHHHhCCCEEEEEccCChHH-HHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHH
Q 002430 497 DSAETIRRALNLGVNVKMITGDQLAI-GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~~t-A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 575 (923)
|.-+++.++++.|=++.+++=.+..- ...+.+-+|+. ...+.=-+|++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 45566666666666666665544322 34444444431 2234555677778
Q ss_pred HHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHH-hhccCEEecCCCchhHHHHHHHhHHHHHHHHH
Q 002430 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAA-RSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649 (923)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A-~~aADivl~~~~~~~i~~~i~~gR~~~~~i~~ 649 (923)
..++.+++.| .-+.+|++. ..+.| +.--..++.+.+-.++..++.+++++++..++
T Consensus 116 ~~i~~~~~~G-~~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEG-VDVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CcEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 8899999888 445777752 12222 33455788888899999999999999887664
No 231
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=29.67 E-value=4.8e+02 Score=24.48 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=29.6
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCcc--ChHhhhcCCeeeEec
Q 002430 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVA 611 (923)
Q Consensus 566 far~sP~~K~~iV~~lq~~g~~V~m~GDG~N--DapaLk~AdVGIamg 611 (923)
+++..+.=-.++++.+. +=+.+...|-|+| |..++++-+|-++=.
T Consensus 43 i~~~~~~~~~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 43 IVGSGTPLTAEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EESTTSTBSHHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEcCCCCcCHHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 44444422345666663 3457889999998 888999988888774
No 232
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=29.08 E-value=1.6e+02 Score=32.37 Aligned_cols=105 Identities=23% Similarity=0.304 Sum_probs=60.3
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc--CcccccccCcchHHHHhhhcCe
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL--GQDKDASIAALPVDELIEKADG 565 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~v 565 (923)
+.+-|.||+ .+.|+++|++|.+|+++|--...-|...+ +... ....+. |...+.-+....+. +-.-++
T Consensus 161 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~----~~~s--~vD~~~GiGGaPEGVlaAaAlk--clGG~m 230 (319)
T PRK09479 161 VVVLDRPRH--EELIAEIREAGARVKLISDGDVAGAIATA----FPDT--GVDILMGIGGAPEGVLAAAALK--CLGGEM 230 (319)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh----cCCC--CeeEEEEcCcChHHHHHHHHHH--hcCcee
Confidence 456688887 58999999999999999965555555554 2111 011111 11111111111111 112346
Q ss_pred EEecChhhHHHHHHHHhh---------------CCCEEEEEcCCccChHhhh
Q 002430 566 FAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALK 602 (923)
Q Consensus 566 far~sP~~K~~iV~~lq~---------------~g~~V~m~GDG~NDapaLk 602 (923)
.+|.-|....+.-++.+. +|.-|.++.-|+.|...|+
T Consensus 231 qgRL~~~~~~e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 231 QGRLLPRNEEERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred EEeECCCCHHHHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 788877665554333321 1336889999999999887
No 233
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=28.85 E-value=1.7e+02 Score=32.46 Aligned_cols=49 Identities=20% Similarity=0.206 Sum_probs=38.8
Q ss_pred EEEeccCCCCCccHHHHHHHHHhC----CCEEEEEccCC---h-HHHHHHHHHhCCC
Q 002430 485 VGLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---L-AIGKETGRRLGMG 533 (923)
Q Consensus 485 lG~i~i~D~lr~~~~~~I~~l~~a----GI~v~mlTGD~---~-~tA~~ia~~~Gi~ 533 (923)
=|++.-.+++-+++.++++.|+.. |+++..+|-.. . ..+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 477778889999999999999998 99999999665 2 2355556677763
No 234
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=28.78 E-value=1e+02 Score=34.14 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeecCCCC--------CCCCCCCceEEEEeccCCCCCcc--HHHHHHHHHhCCCE--E
Q 002430 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKT--------KESPGAPWQLVGLLPLFDPPRHD--SAETIRRALNLGVN--V 512 (923)
Q Consensus 445 ~~~~~~~i~~~a~~GlR~l~~A~~~~~~~~--------~~~~e~~l~llG~i~i~D~lr~~--~~~~I~~l~~aGI~--v 512 (923)
-+...++++-+.+.|++=+.++.|..+-.. .+..+.+|. +|++-=-....-- +.-.|..|-..||- +
T Consensus 150 veSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPLH-lGVTEAG~~~~G~IKSaigig~LL~~GIGDTI 228 (346)
T TIGR00612 150 VQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPLH-LGVTEAGMGVKGIVKSSAGIGILLARGIGDTI 228 (346)
T ss_pred HHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCce-eccccCCCCCCchhHHHHHHHHHHhhCCCCeE
Confidence 344455666777788888888887633211 011222222 3444333333322 34456778888882 3
Q ss_pred -EEEccCCh---HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChh---hHHHHHHHHhh--
Q 002430 513 -KMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE---HKYEIVKRLQE-- 583 (923)
Q Consensus 513 -~mlTGD~~---~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~---~K~~iV~~lq~-- 583 (923)
+=+|+|.. .+|.+|=+.+|+-.... ..+ . +.-|+|+.-+ .=.++-+.++.
T Consensus 229 RVSLT~dP~~EV~va~~IL~slglr~~g~--~ii-S------------------CPtCGR~~~dl~~~~~~ve~~l~~~~ 287 (346)
T TIGR00612 229 RVSLTDDPTHEVPVAFEILQSLGLRARGV--EIV-A------------------CPSCGRTGFDVEKVVRRVQEALFHLK 287 (346)
T ss_pred EEECCCCcHHHHHHHHHHHHHcCCCcCCC--eEE-E------------------CCCCCCcCCCHHHHHHHHHHHHhcCC
Confidence 34789874 56788888999864311 111 0 1123443211 11123333443
Q ss_pred CCCEEEEEcCCccChHhhhcCCeeeEec-cch
Q 002430 584 RKHICGMTGDGVNDAPALKKADIGIAVA-DAT 614 (923)
Q Consensus 584 ~g~~V~m~GDG~NDapaLk~AdVGIamg-~gt 614 (923)
..-.||..|==+|-..--+.||+|||-| .|.
T Consensus 288 ~~l~VAVMGCvVNGPGEak~ADiGIaggg~g~ 319 (346)
T TIGR00612 288 TPLKVAVMGCVVNGPGEAKHADIGISGGGTGS 319 (346)
T ss_pred CCCEEEEECceecCCchhhccCeeeecCCCCc
Confidence 3578999999999999999999999987 543
No 235
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=28.21 E-value=86 Score=30.93 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=37.3
Q ss_pred CCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCC
Q 002430 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (923)
Q Consensus 491 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~ 533 (923)
.=.+||++.+.+++|++. +++.+.|.=....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 335799999999999955 999999999999999999999864
No 236
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=27.87 E-value=1.4e+03 Score=29.92 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=10.0
Q ss_pred CeEEEEeCCCCCCCcEEEEe
Q 002430 143 GRWSEQDASILVPGDVISIK 162 (923)
Q Consensus 143 g~~~~i~~~~Lv~GDiV~l~ 162 (923)
|....+...|.+|.|.+.++
T Consensus 162 GDiv~l~~Gd~IPaD~~il~ 181 (997)
T TIGR01106 162 GDLVEVKGGDRIPADLRIIS 181 (997)
T ss_pred CCEEEECCCCEEeeeEEEEE
Confidence 44445555555555555444
No 237
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.80 E-value=95 Score=33.84 Aligned_cols=45 Identities=13% Similarity=0.207 Sum_probs=32.9
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.++++++.++.++.+++.|++ +.++-||++... ...|+++||..
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456788889999999888876 466678887554 45677888854
No 238
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.52 E-value=93 Score=33.94 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=33.8
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.+.++++.++-|+.+++.|++ +.++.||+++.. ...|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788899999999988886 566779987654 45677889854
No 239
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.48 E-value=90 Score=34.12 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=33.0
Q ss_pred cCCCCCccHHHHHHHHHhCCCEE---EEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~v---~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.+.++++.++.++.+++.|++. .++-||+++.. ...|+++||..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667888999999998888763 55678887654 45677888854
No 240
>PF15584 Imm44: Immunity protein 44
Probab=26.68 E-value=32 Score=30.39 Aligned_cols=20 Identities=30% Similarity=0.373 Sum_probs=16.3
Q ss_pred CCcEEEEeCCCeeccceEEE
Q 002430 155 PGDVISIKLGDIVPADARLL 174 (923)
Q Consensus 155 ~GDiV~l~~Gd~IPaD~~ll 174 (923)
+.+-..|+.|+.|||||+-=
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45567889999999999873
No 241
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=26.41 E-value=1.9e+02 Score=31.58 Aligned_cols=105 Identities=21% Similarity=0.318 Sum_probs=58.7
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc--CcccccccCcchHHHHhhhcCe
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL--GQDKDASIAALPVDELIEKADG 565 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~v 565 (923)
+.+-|.||+ .+.|+++|++|.+|+++|--...-|...+ +... ....+. |...+.-++...+. +-.-.+
T Consensus 158 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDV~~ai~~~----~~~s--~vD~~~GiGGaPEGVlaAaAlk--clGG~~ 227 (309)
T cd01516 158 VVVLDRPRH--AALIEEIREAGARIKLIPDGDVAAAIATA----LPGS--GVDVLMGIGGAPEGVLAAAALK--CLGGEM 227 (309)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh----CCCC--CeeEEEECCCChHHHHHHHHHH--hCCcee
Confidence 446688887 58999999999999999954554454444 2211 111121 11111111111111 112246
Q ss_pred EEecChhhHHHHHHHHhh---------------CCCEEEEEcCCccChHhhh
Q 002430 566 FAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALK 602 (923)
Q Consensus 566 far~sP~~K~~iV~~lq~---------------~g~~V~m~GDG~NDapaLk 602 (923)
.+|.-|....+.-++.+. +|.-|.++.-|+.|...|+
T Consensus 228 qgrL~~~~~~e~~r~~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~ 279 (309)
T cd01516 228 QGRLLPRNEEERARAREMGITDPNKILTLDDLVRGDDVVFAATGITDGELLK 279 (309)
T ss_pred EEEECCCCHHHHHHHHHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccC
Confidence 778777665444333321 2456888888899988887
No 242
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.73 E-value=1e+02 Score=33.69 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=31.1
Q ss_pred cCCCCCccHHHHHHHHHhC-CCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~a-GI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.++++++.++-|+.+++. |++ ..++-||++... ...|+++||..
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDS 63 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456778888889988855 675 455678886544 45677888854
No 243
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=25.54 E-value=3.3e+02 Score=27.52 Aligned_cols=82 Identities=17% Similarity=0.308 Sum_probs=42.6
Q ss_pred ccccccccCC-HHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHhhchHHHHHHHHHHHHHHHhcCC
Q 002430 14 NESVDLERIP-IEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG 92 (923)
Q Consensus 14 ~~~~~~~~~~-~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~ 92 (923)
...+|++++. .+++.+++. ...++.+|+.+|+++--.. ++.++.|...+. .-+.++.++++++
T Consensus 59 ~~~~nl~~l~~v~~l~~~~~--~~~~~~~ea~~~L~~I~~~---~~~y~~~~~~l~--------~~l~~~~fa~lfg--- 122 (193)
T PF06738_consen 59 PRGVNLDKLAAVNRLSRRIV--AGQLSLEEAIERLDEIDRE---PPRYPPWLVILA--------AGLASAAFALLFG--- 122 (193)
T ss_pred CCCcCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHhhC---CCCCCHHHHHHH--------HHHHHHHHHHHHC---
Confidence 3345555543 344544443 3689999999999873321 124666655433 1223334444443
Q ss_pred CCCCchhhHHHHHHHHHHHHHH
Q 002430 93 GRDPDWQDFVGIIVLLVINSTI 114 (923)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~ 114 (923)
++|.+.+.-.++-++...+
T Consensus 123 ---g~~~~~~~a~i~g~~~~~~ 141 (193)
T PF06738_consen 123 ---GSWIDMIVAFILGLLVGLL 141 (193)
T ss_pred ---CCHHHHHHHHHHHHHHHHH
Confidence 3677765544443333333
No 244
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=25.17 E-value=2.8e+02 Score=30.00 Aligned_cols=30 Identities=7% Similarity=0.165 Sum_probs=19.4
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChHh
Q 002430 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPA 600 (923)
Q Consensus 571 P~~K~~iV~~lq~~g~~V~m~GDG~NDapa 600 (923)
|++=.++++.+++.-..-.++|=|+|+..-
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 445567777787764444567999885443
No 245
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=25.16 E-value=4.3e+02 Score=23.12 Aligned_cols=25 Identities=24% Similarity=0.244 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEeC
Q 002430 118 EENNAGNAAAALMANLAPKTKVLRD 142 (923)
Q Consensus 118 ~e~~~~~~~~~l~~~~~~~~~V~Rd 142 (923)
-.+|+++..+++.+.+.+-.+|.-.
T Consensus 23 pqkK~~k~~~~m~~~L~~Gd~VvT~ 47 (84)
T TIGR00739 23 PQRKRRKAHKKLIESLKKGDKVLTI 47 (84)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 3455555556666666665555543
No 246
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=25.14 E-value=2.2e+02 Score=27.99 Aligned_cols=67 Identities=15% Similarity=0.172 Sum_probs=33.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeC
Q 002430 95 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA-------LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL 163 (923)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~~~~~~e~~~~~~~~~-------l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~ 163 (923)
...|-|..+|++++++..+.--++++.+.+...+ +.+..+..-.| +-+..-+.+..+.-|-||+++.
T Consensus 43 ~tKyRDL~II~~L~ll~l~giq~~~y~~~~~~~~q~~~~~~fi~~vA~~~~V--~~~~v~VNst~l~dG~iVki~~ 116 (149)
T PF11694_consen 43 DTKYRDLSIIALLLLLLLIGIQYSDYQQNQNQHSQSSQMVHFIESVAKDLGV--SKEEVYVNSTALTDGMIVKIGD 116 (149)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHHhCC--ChheEEEecccccCCeEEEECC
Confidence 4577887776655544443333444433322211 11111111111 2234567788888888887773
No 247
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=25.01 E-value=1.6e+02 Score=32.92 Aligned_cols=57 Identities=28% Similarity=0.416 Sum_probs=38.3
Q ss_pred HHHHHHhhCCCEEEEEcCCc--------------------cChHhhhcC--CeeeEec----cchHHHhh--ccCEEecC
Q 002430 576 EIVKRLQERKHICGMTGDGV--------------------NDAPALKKA--DIGIAVA----DATDAARS--ASDIVLTE 627 (923)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~--------------------NDapaLk~A--dVGIamg----~gtd~A~~--aADivl~~ 627 (923)
.+++.|+++|..|+.+.=|. .|-|+|=+- ++.+.++ .+...+.+ .+|++|+|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 56778888898888884332 366665433 6777776 23344433 58999999
Q ss_pred CCchh
Q 002430 628 PGLSV 632 (923)
Q Consensus 628 ~~~~~ 632 (923)
|+|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 99864
No 248
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=24.55 E-value=6.9e+02 Score=30.09 Aligned_cols=102 Identities=15% Similarity=0.110 Sum_probs=64.5
Q ss_pred cHHHHHHHHHhCCCEEEEEccCCh-HHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhcCeEEecChhhHH
Q 002430 497 DSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (923)
Q Consensus 497 ~~~~~I~~l~~aGI~v~mlTGD~~-~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfar~sP~~K~ 575 (923)
|+-.+++.+++.+=++.+++=.+. ..+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 567778788877777888776663 3455566656552 2357778888999
Q ss_pred HHHHHHhhCCCEEEEEcCCccChHhhhcCCeeeEeccchHHHhhccCEEecCCCchhHHHHHHHhHHHHH
Q 002430 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 645 (923)
Q Consensus 576 ~iV~~lq~~g~~V~m~GDG~NDapaLk~AdVGIamg~gtd~A~~aADivl~~~~~~~i~~~i~~gR~~~~ 645 (923)
..|+.++++|..| .+|||+- ++.|+++-=--+...+-.++..++.......+
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~-----------------~~~A~~~g~~g~~~~s~e~i~~a~~~A~~~~~ 197 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI-----------------TDLAEEAGMTGIFIYSAATVRQAFEDALDMTR 197 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH-----------------HHHHHHhCCceEEecCHHHHHHHHHHHHHHHH
Confidence 9999999999654 6798743 23333322112222234677777776655443
No 249
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.43 E-value=1.2e+02 Score=33.45 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=32.9
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.+.+|++.++-++.+++.|++ +.++-||++... ...|+++||..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEA 63 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788889999999888885 456668887544 45677888854
No 250
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=24.06 E-value=2.2e+02 Score=31.43 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=59.0
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCccc--CcccccccCcchHHHHhhhcCe
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL--GQDKDASIAALPVDELIEKADG 565 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~v 565 (923)
+.+-|.||+ .+.|+++|++|.+|++++--...-|...| +... ....+. |...+.-++...+. +-.-.+
T Consensus 159 V~vLdRpRH--~~lI~eir~~Gari~Li~DGDV~~ai~~~----~~~~--~vD~~~GiGGaPEGVlaAaAlk--clGG~~ 228 (322)
T PRK12415 159 VIVQERERH--QDIIDRVRAKGARVKLFGDGDVGASIATA----LPGT--GIDLFVGIGGAPEGVISAAALK--CLGGEM 228 (322)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh----CCCC--CeeEEEEcCCChHHHHHHHHHH--hCCcee
Confidence 456688887 58999999999999999954554444444 2211 111111 11111111111111 112246
Q ss_pred EEecChhhHHHHHHHHhh---------------CCCEEEEEcCCccChHhhh
Q 002430 566 FAGVFPEHKYEIVKRLQE---------------RKHICGMTGDGVNDAPALK 602 (923)
Q Consensus 566 far~sP~~K~~iV~~lq~---------------~g~~V~m~GDG~NDapaLk 602 (923)
.+|.-|+...+.-++.+. +|.-|.++.-|+.|...|+
T Consensus 229 q~rL~~~~~~e~~r~~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~ 280 (322)
T PRK12415 229 QARLVPMNEEEEARCREMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLD 280 (322)
T ss_pred EEEECCCCHHHHHHHHHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcC
Confidence 778777655444333221 2556888888999998887
No 251
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=23.49 E-value=1e+02 Score=32.56 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=28.3
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCEEEEEccCCh
Q 002430 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 520 (923)
Q Consensus 486 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 520 (923)
|++.-.+.+=+++.++|+.+++.|++++++|....
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~ 41 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSS 41 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCC
Confidence 45555566678999999999999999999995443
No 252
>PRK10234 DNA-binding transcriptional activator GutM; Provisional
Probab=23.40 E-value=5.1e+02 Score=24.37 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCC-eeccceEEEec
Q 002430 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGD-IVPADARLLEG 176 (923)
Q Consensus 106 ~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd-~IPaD~~ll~g 176 (923)
++.++..+++++|-++-.+..++|.+. -.+-+=|.+ .-+.||-||.+--++ -.-.|+.+++|
T Consensus 11 ~a~llQ~~lg~~Qik~Fn~~~~~L~~~--G~V~iGr~~-------grf~~g~IvllaiD~~~~I~d~~~M~G 73 (118)
T PRK10234 11 IAWCAQLALGGWQISRFNRAFDTLCQQ--GRVGVGRSS-------GRFKPRVVVALALDEQQRVVDTLFMKG 73 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--CceEEeccc-------CccCCCeEEEEEECCCCcEEeeEEEcc
Confidence 345677888999999999999998874 234444432 256899988775443 23345555555
No 253
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=23.38 E-value=1.7e+03 Score=28.76 Aligned_cols=90 Identities=18% Similarity=0.156 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeC-CCCCCCcEEEEeCCCeeccceEEEe-cC
Q 002430 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDA-SILVPGDVISIKLGDIVPADARLLE-GD 177 (923)
Q Consensus 100 ~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~-~~Lv~GDiV~l~~Gd~IPaD~~ll~-g~ 177 (923)
++.--++++++..+-.++..++..++.+++.++..... . +...+.- ++-.-|....+...|.+|-|.++++ |+
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~----~-~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd 195 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVS----N-TATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGD 195 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----C-eEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCC
Confidence 33333444445555556666677777777776544322 1 1122211 0001166889999999999999996 44
Q ss_pred CeEEEeccccCCCccee
Q 002430 178 PLKIDQSALTGESLPVT 194 (923)
Q Consensus 178 ~~~Vdes~LTGEs~pv~ 194 (923)
.+-+|=-.+.|+..-|.
T Consensus 196 ~IPaDg~li~g~~l~VD 212 (902)
T PRK10517 196 MIPADLRILQARDLFVA 212 (902)
T ss_pred EEeeeEEEEEcCceEEE
Confidence 45667667777664444
No 254
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.09 E-value=1.2e+02 Score=33.26 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=30.5
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.+.+|++.++-|+.+++.|++ ..++-||+++.. ...|+++||..
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHS 64 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEE
Confidence 4456778888888888877765 355568776543 45567778753
No 255
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.53 E-value=1.2e+02 Score=33.00 Aligned_cols=138 Identities=15% Similarity=0.233 Sum_probs=73.9
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCCCCCCC--C-----------------c
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGTNMYPS--S-----------------S 541 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~~~~~~--~-----------------~ 541 (923)
+.+.+|++.++-++.+++.|++ ..++-||++... ...|+++||....+.- . .
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 90 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPR 90 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 4566788888999999888875 345568886543 5567788885422110 0 0
Q ss_pred ccCc----ccc------------------cccCcchHHHHhhhcCeEEecChhhHHHHHHHHhh--CCCEEEEEcCCcc-
Q 002430 542 LLGQ----DKD------------------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN- 596 (923)
Q Consensus 542 l~~~----~~~------------------~~~~~~~~~~~~~~~~vfar~sP~~K~~iV~~lq~--~g~~V~m~GDG~N- 596 (923)
+.|- +.. +.++...+..+......|.-+||.-=.++++..+- .|..|..+|-+.-
T Consensus 91 V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 170 (284)
T PRK14190 91 INGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIV 170 (284)
T ss_pred CCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCcc
Confidence 0000 000 01111222333333334666777766666665542 4899999998843
Q ss_pred ---ChHhhhc--CCeeeEeccchH--HHhhccCEEecC
Q 002430 597 ---DAPALKK--ADIGIAVADATD--AARSASDIVLTE 627 (923)
Q Consensus 597 ---DapaLk~--AdVGIamg~gtd--~A~~aADivl~~ 627 (923)
=+.+|.. |.|-++-....+ ..-..||+++..
T Consensus 171 G~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 171 GKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVA 208 (284)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 1234433 444444332222 223478888753
No 256
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=22.53 E-value=1.3e+02 Score=27.97 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=27.4
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCC
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi 532 (923)
-+++.++++.+++.|++++.+|++.+ . ...+.+-|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~-l-~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK-L-LEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch-H-HHHHHHcCC
Confidence 36889999999999999999999874 2 234554443
No 257
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=21.74 E-value=71 Score=33.82 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=48.0
Q ss_pred CccHHHHHHHHHhCCCEEEEEccCChHHHHHHHHHhCCCCCCCCCCcccCcccccccCcchHHHHhhhc--Ce--EEecC
Q 002430 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA--DG--FAGVF 570 (923)
Q Consensus 495 r~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~v--far~s 570 (923)
-++..++++.+++.|++. ++|......+.......|.. .+...++.. +. +..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 378889999998899997 77775544332222222211 111111100 01 11112
Q ss_pred hhhHHHHHHHHhhC-CCEEEEEcCC-ccChHhhhcCCee
Q 002430 571 PEHKYEIVKRLQER-KHICGMTGDG-VNDAPALKKADIG 607 (923)
Q Consensus 571 P~~K~~iV~~lq~~-g~~V~m~GDG-~NDapaLk~AdVG 607 (923)
|+-=..+.+.+... ...+.|+||. .+|..+=++|++-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 22112333333322 2469999999 5999888887764
No 258
>TIGR00330 glpX fructose-1,6-bisphosphatase, class II. In E. coli, GlpX is found in the glpFKX operon together with a glycerol update protein and glycerol kinase.
Probab=21.70 E-value=2.8e+02 Score=30.43 Aligned_cols=38 Identities=29% Similarity=0.390 Sum_probs=28.4
Q ss_pred eccCCCCCccHHHHHHHHHhCCCEEEEEccCChHHHHHHH
Q 002430 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 527 (923)
Q Consensus 488 i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~tA~~ia 527 (923)
+.+-|.||+ .+.|+++|++|.+|+++|--...-|...+
T Consensus 158 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~ 195 (321)
T TIGR00330 158 VTILAKPRH--DAVIAEMQQLGVRVFAIPDGDVAASILTC 195 (321)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh
Confidence 445688887 58999999999999999954544444443
No 259
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=21.65 E-value=5.4e+02 Score=27.64 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=26.4
Q ss_pred HhCCCEEEEEccCCh-------HHHHHHHHHhCCCCCCC
Q 002430 506 LNLGVNVKMITGDQL-------AIGKETGRRLGMGTNMY 537 (923)
Q Consensus 506 ~~aGI~v~mlTGD~~-------~tA~~ia~~~Gi~~~~~ 537 (923)
..+|-+|.-+|=|.+ +.|..+|+++||.....
T Consensus 39 ~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i 77 (269)
T COG1606 39 EALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFI 77 (269)
T ss_pred HHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceee
Confidence 567889999999974 78999999999976543
No 260
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.59 E-value=2.8e+02 Score=30.21 Aligned_cols=64 Identities=17% Similarity=0.285 Sum_probs=37.9
Q ss_pred CeEEecChhhHHHHHHHHhh--CCCEEEEEcCCc-cChH---hhhc--CCeeeEeccchHH--HhhccCEEecC
Q 002430 564 DGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGV-NDAP---ALKK--ADIGIAVADATDA--ARSASDIVLTE 627 (923)
Q Consensus 564 ~vfar~sP~~K~~iV~~lq~--~g~~V~m~GDG~-NDap---aLk~--AdVGIamg~gtd~--A~~aADivl~~ 627 (923)
..|.-+||.-=.++++...- .|..|..+|-+. -=-| +|.. |.|-++-....+. .-..||+++..
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 34556677665566555542 489999999993 3445 5644 4455544433222 23478999853
No 261
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.59 E-value=1.5e+02 Score=32.29 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=33.2
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.++++++.++-++.+++.|++ ..++-||++... ...|+++||..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788889999999888886 456678887654 45677888854
No 262
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.42 E-value=60 Score=25.83 Aligned_cols=12 Identities=42% Similarity=0.675 Sum_probs=10.3
Q ss_pred CCCcEEEEeCCC
Q 002430 154 VPGDVISIKLGD 165 (923)
Q Consensus 154 v~GDiV~l~~Gd 165 (923)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999884
No 263
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=20.77 E-value=1.7e+02 Score=25.68 Aligned_cols=41 Identities=20% Similarity=0.127 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCC
Q 002430 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLG 164 (923)
Q Consensus 107 ~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~G 164 (923)
++++...+-|+.-+..+|..++.+++. ++|+|||-|....|
T Consensus 9 ~vv~~~i~yf~~~rpqkK~~k~~~~m~-----------------~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 9 LVLIFLIFYFLIIRPQRKRRKAHKKLI-----------------ESLKKGDKVLTIGG 49 (84)
T ss_pred HHHHHHHHHHheechHHHHHHHHHHHH-----------------HhCCCCCEEEECCC
Confidence 334445556666666667666655432 47899999888776
No 264
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.50 E-value=1.7e+02 Score=32.02 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=32.6
Q ss_pred cCCCCCccHHHHHHHHHhCCCE---EEEEccCChHHH------HHHHHHhCCCC
Q 002430 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (923)
Q Consensus 490 i~D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~tA------~~ia~~~Gi~~ 534 (923)
+.+.++++.++-++.+++.|++ +.++-||+++.. ...|+++||..
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888999999888876 356678887544 45677888853
No 265
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.20 E-value=8.4e+02 Score=31.12 Aligned_cols=95 Identities=17% Similarity=0.195 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCCCeeccceEEEe-cCCeEEEeccc
Q 002430 108 LVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKIDQSAL 186 (923)
Q Consensus 108 ~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~Gd~IPaD~~ll~-g~~~~Vdes~L 186 (923)
+++..+-.+++++-..++.+++.++....-... .. ++-|....+...+..|-|.+++. |+.+-+|=-.+
T Consensus 293 ~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a-----~~-----~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 293 IGLINLGHMLEARARQRSSKALEKLLDLTPPTA-----RV-----VTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEE-----EE-----EeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 344444466777777788888877655333221 11 23466778888899999999994 44456676666
Q ss_pred cCCCcceecC--CCCc----ccccceeecCeEE
Q 002430 187 TGESLPVTKN--PYDE----VFSGSTCKQGEIE 213 (923)
Q Consensus 187 TGEs~pv~K~--~~~~----v~~Gt~v~~G~~~ 213 (923)
.|++. +.-+ .|+. .-.|..|..|+..
T Consensus 363 ~g~~~-vdeS~lTGEs~pv~k~~gd~V~aGt~~ 394 (834)
T PRK10671 363 QGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVV 394 (834)
T ss_pred EceEE-EeehhhcCCCCCEecCCCCEEEeccee
Confidence 77532 2221 1322 2356666666643
No 266
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=20.17 E-value=2.1e+02 Score=26.46 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCeEEEEeCCCCCCCcEEEEeCC
Q 002430 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLG 164 (923)
Q Consensus 100 ~~~~i~~~~~~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiV~l~~G 164 (923)
....++.++++.+.+-|+.-+..+|..++.+++. ++|+|||-|.-..|
T Consensus 3 ~~~~ll~lv~i~~i~yF~~iRPQkKr~K~~~~m~-----------------~~Lk~GD~VvT~gG 50 (109)
T PRK05886 3 SLVLFLPFLLIMGGFMYFASRRQRKAMQATIDLH-----------------ESLQPGDRVHTTSG 50 (109)
T ss_pred hHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH-----------------HhcCCCCEEEECCC
No 267
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=20.12 E-value=80 Score=34.56 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=29.6
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCE-EEEEccCChH
Q 002430 483 QLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQLA 521 (923)
Q Consensus 483 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~-v~mlTGD~~~ 521 (923)
+.+--+...|.-|.+..+-+..++++||+ |..+|||.+.
T Consensus 72 ~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 72 EPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp -EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred ceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 44555667788888999999999999996 9999999864
Done!