Query 002432
Match_columns 922
No_of_seqs 458 out of 4097
Neff 10.2
Searched_HMMs 13730
Date Tue Mar 26 02:06:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002432.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002432hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.8 6.3E-19 4.6E-23 192.5 28.5 99 652-771 284-382 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.8 8.3E-19 6E-23 191.5 27.1 168 521-746 216-383 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.7 2.2E-16 1.6E-20 165.5 23.4 154 230-403 11-167 (305)
4 d1p9ag_ c.10.2.7 (G:) von Will 99.7 9.8E-17 7.1E-21 164.2 18.5 178 209-405 12-191 (266)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.4E-16 1E-20 162.9 17.4 187 192-399 17-208 (266)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.7 1.1E-15 7.8E-20 160.3 24.5 99 230-333 32-133 (305)
7 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 2.9E-16 2.1E-20 165.3 16.1 114 247-362 68-187 (313)
8 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 1.8E-16 1.3E-20 166.8 13.0 173 207-397 50-232 (313)
9 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 2.2E-14 1.6E-18 153.8 27.5 118 256-399 58-175 (353)
10 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.7E-15 2E-19 146.9 18.1 165 206-395 45-209 (210)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 4.8E-15 3.5E-19 153.2 20.3 197 190-404 16-219 (284)
12 d2omxa2 c.10.2.1 (A:37-235) In 99.6 3.1E-15 2.3E-19 145.2 17.4 161 206-391 39-199 (199)
13 d2omxa2 c.10.2.1 (A:37-235) In 99.6 3.5E-15 2.5E-19 144.8 16.0 161 227-412 38-198 (199)
14 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 9.7E-15 7.1E-19 150.9 19.6 173 211-401 15-192 (284)
15 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 4.1E-13 3E-17 143.6 28.7 137 208-362 39-175 (353)
16 d2a5yb3 c.37.1.20 (B:109-385) 99.6 2.2E-16 1.6E-20 161.1 2.4 100 5-113 178-277 (277)
17 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 5.1E-14 3.7E-18 137.7 17.8 164 227-415 44-207 (210)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 1.1E-13 8E-18 137.5 18.9 186 205-415 39-224 (227)
19 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 3.9E-13 2.9E-17 133.4 19.9 179 192-395 48-226 (227)
20 d1dcea3 c.10.2.2 (A:444-567) R 99.5 9.5E-14 6.9E-18 122.0 10.8 101 259-362 1-103 (124)
21 d1dcea3 c.10.2.2 (A:444-567) R 99.4 2.2E-13 1.6E-17 119.7 11.7 117 232-354 1-122 (124)
22 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 9.6E-14 7E-18 128.6 8.7 110 252-362 14-125 (162)
23 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 1.2E-13 8.8E-18 127.9 5.1 124 226-355 15-145 (162)
24 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 1.5E-12 1.1E-16 130.7 13.2 208 652-899 28-239 (242)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 1.9E-12 1.4E-16 124.3 12.4 123 233-362 12-139 (192)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.3 6.2E-13 4.5E-17 136.5 8.7 102 258-359 25-131 (284)
27 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 2.2E-12 1.6E-16 123.9 12.0 127 258-400 10-140 (192)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 7E-12 5.1E-16 125.7 16.3 97 232-334 11-113 (242)
29 d2astb2 c.10.1.3 (B:2136-2419) 99.2 4.5E-13 3.3E-17 137.5 0.9 67 651-718 69-135 (284)
30 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 6.6E-13 4.8E-17 127.6 -2.3 113 246-362 39-153 (198)
31 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 6E-13 4.4E-17 127.9 -4.5 141 209-355 25-180 (198)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 3.7E-09 2.7E-13 96.4 11.2 103 258-362 10-116 (156)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 3.9E-11 2.8E-15 133.0 -3.2 104 230-335 3-123 (460)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 4.1E-09 3E-13 96.1 10.2 100 232-335 11-114 (156)
35 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.7 2E-10 1.5E-14 127.0 -4.2 105 257-362 3-125 (460)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.5 1.2E-08 8.7E-13 107.5 2.6 135 253-397 90-254 (344)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.4 7.1E-08 5.1E-12 101.4 4.1 184 207-400 93-316 (344)
38 d1koha1 c.10.2.3 (A:201-362) m 97.9 4.6E-07 3.3E-11 82.8 -2.1 42 252-293 61-105 (162)
39 d1koha1 c.10.2.3 (A:201-362) m 97.5 9.4E-06 6.8E-10 73.8 1.6 100 255-355 41-152 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 96.7 0.0017 1.2E-07 58.6 8.3 60 275-334 40-110 (167)
41 d1pgva_ c.10.1.1 (A:) Tropomod 96.7 0.00083 6.1E-08 60.7 6.1 81 253-333 41-140 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.1 0.0025 1.8E-07 57.4 5.4 80 253-332 14-110 (166)
43 d1io0a_ c.10.1.1 (A:) Tropomod 95.2 0.008 5.8E-07 53.9 4.9 108 227-334 15-142 (166)
44 d2fnaa2 c.37.1.20 (A:1-283) Ar 65.1 3.1 0.00023 39.3 5.4 58 5-66 201-259 (283)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.83 E-value=6.3e-19 Score=192.46 Aligned_cols=99 Identities=22% Similarity=0.245 Sum_probs=49.6
Q ss_pred CCCcceeeecccceeeeccCCCcccccCccEEEeccCcCccccccHHHHhhhccccEEEEecccccceEecccCCCCCCC
Q 002432 652 LPNLEALELCEINVKSIWHNQTPCCFQRLTRLIVWGCQKLKFMFYASMIKSLEQLQHLEIRNCTGLQVIISEGGPGQEPP 731 (922)
Q Consensus 652 l~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~C~~L~~l~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~~~ 731 (922)
++.++.+++.+|.++.+.. ...+++++.|+++++ +++.+++ +..+++|++|++++| .++.+. .
T Consensus 284 ~~~l~~l~~~~n~l~~~~~---~~~~~~l~~L~ls~n-~l~~l~~---l~~l~~L~~L~L~~n-~l~~l~---------~ 346 (384)
T d2omza2 284 LTALTNLELNENQLEDISP---ISNLKNLTYLTLYFN-NISDISP---VSSLTKLQRLFFANN-KVSDVS---------S 346 (384)
T ss_dssp CTTCSEEECCSSCCSCCGG---GGGCTTCSEEECCSS-CCSCCGG---GGGCTTCCEEECCSS-CCCCCG---------G
T ss_pred ccccccccccccccccccc---cchhcccCeEECCCC-CCCCCcc---cccCCCCCEEECCCC-CCCCCh---------h
Confidence 4445555555554443311 123455666666653 4444421 455566666666665 444431 1
Q ss_pred cccccccceeecccCCCccccCCCcCcCCCCCccEEEEec
Q 002432 732 CFAFRRVTNISLCHLPELTCLYPGLHTSEWPELKKLEVFS 771 (922)
Q Consensus 732 ~~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~ 771 (922)
...+++|++|++++| +++.+++ + .++++|+.|+|++
T Consensus 347 l~~l~~L~~L~l~~N-~l~~l~~-l--~~l~~L~~L~L~~ 382 (384)
T d2omza2 347 LANLTNINWLSAGHN-QISDLTP-L--ANLTRITQLGLND 382 (384)
T ss_dssp GGGCTTCCEEECCSS-CCCBCGG-G--TTCTTCSEEECCC
T ss_pred HcCCCCCCEEECCCC-cCCCChh-h--ccCCCCCEeeCCC
Confidence 123556666666554 3444432 2 2566777777665
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.82 E-value=8.3e-19 Score=191.49 Aligned_cols=168 Identities=21% Similarity=0.251 Sum_probs=102.9
Q ss_pred cccccccccccccccccccccccccccccccCcCeeEEecCCCccccccccccccCCCccEEEEcccccchhhhccCCCC
Q 002432 521 DAFPLLELLSLQNLINLKRICVDRLSTESFSELRTMKVENCDELSNIFVLSTTKCLPSLQRIAVIKCNKMKEIFAIGGEE 600 (922)
Q Consensus 521 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~ 600 (922)
..+++|+.|.+.++. ++.++ ....+++|+.|++.+| .++.+++ +..+++|++|+++++. ++.++..
T Consensus 216 ~~~~~L~~L~l~~n~-l~~~~----~l~~l~~L~~L~l~~n-~l~~~~~---~~~~~~L~~L~l~~~~-l~~~~~~---- 281 (384)
T d2omza2 216 GILTNLDELSLNGNQ-LKDIG----TLASLTNLTDLDLANN-QISNLAP---LSGLTKLTELKLGANQ-ISNISPL---- 281 (384)
T ss_dssp GGCTTCCEEECCSSC-CCCCG----GGGGCTTCSEEECCSS-CCCCCGG---GTTCTTCSEEECCSSC-CCCCGGG----
T ss_pred cccCCCCEEECCCCC-CCCcc----hhhcccccchhccccC-ccCCCCc---ccccccCCEeeccCcc-cCCCCcc----
Confidence 334555666555542 22221 2345667777777776 3444432 4556777777776653 3333221
Q ss_pred CCccCCcccccccccCcccEEecCCCCCccccccCCCCCCCCCCcccccccCCCcceeeecccceeeeccCCCcccccCc
Q 002432 601 PDVVDNNNAIENIEFAQIRYLSLGNLPELKSFCCEVKGPSMPPSLFNGKVVLPNLEALELCEINVKSIWHNQTPCCFQRL 680 (922)
Q Consensus 601 ~~~~~~~~~~~~~~~~~L~~L~l~~c~~L~~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~L 680 (922)
..++.++.+.+..+. +..+ .....+++++.|++++|+++.+.. ...+++|
T Consensus 282 ------------~~~~~l~~l~~~~n~-l~~~--------------~~~~~~~~l~~L~ls~n~l~~l~~---l~~l~~L 331 (384)
T d2omza2 282 ------------AGLTALTNLELNENQ-LEDI--------------SPISNLKNLTYLTLYFNNISDISP---VSSLTKL 331 (384)
T ss_dssp ------------TTCTTCSEEECCSSC-CSCC--------------GGGGGCTTCSEEECCSSCCSCCGG---GGGCTTC
T ss_pred ------------ccccccccccccccc-cccc--------------cccchhcccCeEECCCCCCCCCcc---cccCCCC
Confidence 235555555555442 1111 123457888899999988877642 3467899
Q ss_pred cEEEeccCcCccccccHHHHhhhccccEEEEecccccceEecccCCCCCCCcccccccceeecccC
Q 002432 681 TRLIVWGCQKLKFMFYASMIKSLEQLQHLEIRNCTGLQVIISEGGPGQEPPCFAFRRVTNISLCHL 746 (922)
Q Consensus 681 ~~L~l~~C~~L~~l~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~~~~~~l~~L~~L~l~~c 746 (922)
++|++++| +++.++ .+.++++|++|++++| .++.++ +...+++|+.|+|+++
T Consensus 332 ~~L~L~~n-~l~~l~---~l~~l~~L~~L~l~~N-~l~~l~---------~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 332 QRLFFANN-KVSDVS---SLANLTNINWLSAGHN-QISDLT---------PLANLTRITQLGLNDQ 383 (384)
T ss_dssp CEEECCSS-CCCCCG---GGGGCTTCCEEECCSS-CCCBCG---------GGTTCTTCSEEECCCE
T ss_pred CEEECCCC-CCCCCh---hHcCCCCCCEEECCCC-cCCCCh---------hhccCCCCCEeeCCCC
Confidence 99999987 677763 3678899999999876 566652 1234788999998864
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.72 E-value=2.2e-16 Score=165.53 Aligned_cols=154 Identities=19% Similarity=0.264 Sum_probs=108.1
Q ss_pred CccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCch-hhhccCCCCEEEccCCCCCC--ccccCCCCcCCEE
Q 002432 230 QLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPS-SIDLLVNLQTLCLDYSTLGD--ITIIGKLKNLEIL 306 (922)
Q Consensus 230 ~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~l~~--p~~i~~L~~L~~L 306 (922)
..++++.++.... ++|.++ .+.+++|+|++|+|+++|+ +|.++++|++|++++|.+.. |..|.++++|++|
T Consensus 11 ~~~~~~C~~~~L~---~lP~~l---~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L 84 (305)
T d1xkua_ 11 HLRVVQCSDLGLE---KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERL 84 (305)
T ss_dssp ETTEEECTTSCCC---SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred cCCEEEecCCCCC---ccCCCC---CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEe
Confidence 4456666665544 667654 3578888888888888875 67888888888888888776 5678888888888
Q ss_pred EeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCcccccccccCCcccccccCcccCCCCC
Q 002432 307 SLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLP 386 (922)
Q Consensus 307 ~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 386 (922)
++++|+++.+|..+ ...++.|++.+|. +..++...+.....++.+....+.... .......+..++
T Consensus 85 ~l~~n~l~~l~~~~--~~~l~~L~~~~n~-l~~l~~~~~~~~~~~~~l~~~~n~~~~-----------~~~~~~~~~~l~ 150 (305)
T d1xkua_ 85 YLSKNQLKELPEKM--PKTLQELRVHENE-ITKVRKSVFNGLNQMIVVELGTNPLKS-----------SGIENGAFQGMK 150 (305)
T ss_dssp ECCSSCCSBCCSSC--CTTCCEEECCSSC-CCBBCHHHHTTCTTCCEEECCSSCCCG-----------GGBCTTGGGGCT
T ss_pred cccCCccCcCccch--hhhhhhhhccccc-hhhhhhhhhhccccccccccccccccc-----------cCCCcccccccc
Confidence 88888888887643 3578888888764 777776666777777777776654432 112334566677
Q ss_pred CCCEEEeeecCCCCCCc
Q 002432 387 RLTTLEIAVENDNALPE 403 (922)
Q Consensus 387 ~L~~L~l~~~~~~~~~~ 403 (922)
+|+.+++.++....++.
T Consensus 151 ~L~~l~l~~n~l~~l~~ 167 (305)
T d1xkua_ 151 KLSYIRIADTNITTIPQ 167 (305)
T ss_dssp TCCEEECCSSCCCSCCS
T ss_pred ccCccccccCCccccCc
Confidence 78888877776554443
No 4
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=9.8e-17 Score=164.17 Aligned_cols=178 Identities=22% Similarity=0.234 Sum_probs=133.7
Q ss_pred ceEEEeecCCCCCCCCCCCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEccC
Q 002432 209 CYAISWIDSSGGELPEGLECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDY 288 (922)
Q Consensus 209 l~~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~ 288 (922)
...++.+++.+..+|+.+. +++++|++++|.+. .+|...|.++++|++|+|++|.++.+|. ++.+++|++|++++
T Consensus 12 ~~~v~C~~~~L~~iP~~lp-~~l~~L~Ls~N~i~---~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~ 86 (266)
T d1p9ag_ 12 HLEVNCDKRNLTALPPDLP-KDTTILHLSENLLY---TFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSH 86 (266)
T ss_dssp CCEEECTTSCCSSCCSCCC-TTCCEEECTTSCCS---EEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCS
T ss_pred CeEEEccCCCCCeeCcCcC-cCCCEEECcCCcCC---CcCHHHhhcccccccccccccccccccc-cccccccccccccc
Confidence 3445666667777776442 57888888888765 6777777888888888888888887764 56788888888888
Q ss_pred CCCCC-ccccCCCCcCCEEEeecCCCcccch-hhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCccccccc
Q 002432 289 STLGD-ITIIGKLKNLEILSLIESDIVEFPE-ELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWKVE 366 (922)
Q Consensus 289 ~~l~~-p~~i~~L~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~~ 366 (922)
|++.. +..+..+++|++|+++++.+..++. .+..+.++++|++++|. +..+|...+..+++|+.|++++|.+..
T Consensus 87 N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~l~~l~~l~l~~N~l~~--- 162 (266)
T d1p9ag_ 87 NQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE-LKTLPPGLLTPTPKLEKLSLANNNLTE--- 162 (266)
T ss_dssp SCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCSC---
T ss_pred ccccccccccccccccccccccccccceeeccccccccccccccccccc-cceeccccccccccchhcccccccccc---
Confidence 88877 6778888888888888887776644 45778888888888874 777777767778888888888887763
Q ss_pred ccCCcccccccCcccCCCCCCCCEEEeeecCCCCCCccc
Q 002432 367 DEGSSSKKSKASLDELMPLPRLTTLEIAVENDNALPEGF 405 (922)
Q Consensus 367 ~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~ 405 (922)
.....++.+++|++|++++|.+..+|..+
T Consensus 163 ----------~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~ 191 (266)
T d1p9ag_ 163 ----------LPAGLLNGLENLDTLLLQENSLYTIPKGF 191 (266)
T ss_dssp ----------CCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred ----------cCccccccccccceeecccCCCcccChhH
Confidence 33455777888888888888877777654
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.4e-16 Score=162.89 Aligned_cols=187 Identities=18% Similarity=0.163 Sum_probs=161.7
Q ss_pred ecCCCCCCCCCccccCcceEEEeecCCCCCCCCC-C-CCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCc
Q 002432 192 VRNGDVWEWPDEDALKKCYAISWIDSSGGELPEG-L-ECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLF 269 (922)
Q Consensus 192 ~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~-~-~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~ 269 (922)
..+.++..+|. ++++++++|++++|.+..++.. + ++++|+.|++++|.+. .++. ++.+++|++|++++|+++
T Consensus 17 C~~~~L~~iP~-~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~---~l~~--~~~l~~L~~L~Ls~N~l~ 90 (266)
T d1p9ag_ 17 CDKRNLTALPP-DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT---KLQV--DGTLPVLGTLDLSHNQLQ 90 (266)
T ss_dssp CTTSCCSSCCS-CCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC---EEEC--CSCCTTCCEEECCSSCCS
T ss_pred ccCCCCCeeCc-CcCcCCCEEECcCCcCCCcCHHHhhcccccccccccccccc---cccc--cccccccccccccccccc
Confidence 44456666654 4567899999999999888754 3 8999999999999875 5653 478999999999999999
Q ss_pred cCchhhhccCCCCEEEccCCCCCC--ccccCCCCcCCEEEeecCCCcccchh-hcCCCCCCEEeccCCCCCCccCcchhC
Q 002432 270 SLPSSIDLLVNLQTLCLDYSTLGD--ITIIGKLKNLEILSLIESDIVEFPEE-LGKLTKLRLLDLTNCFHLKVIAPNVIA 346 (922)
Q Consensus 270 ~lp~~i~~L~~L~~L~L~~~~l~~--p~~i~~L~~L~~L~L~~~~l~~lp~~-i~~L~~L~~L~l~~~~~l~~~p~~~l~ 346 (922)
..|..+..+++|++|+++++.+.. +..+..+.++++|++++|.++.+|.. +..+++|++|++++|. +..++.+.++
T Consensus 91 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~-l~~~~~~~~~ 169 (266)
T d1p9ag_ 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN-LTELPAGLLN 169 (266)
T ss_dssp SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC-CSCCCTTTTT
T ss_pred ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccc-ccccCccccc
Confidence 999999999999999999999887 57888999999999999999988765 5789999999999986 8899888799
Q ss_pred CCCCCCEEEccCCcccccccccCCcccccccCcccCCCCCCCCEEEeeecCCC
Q 002432 347 SFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLPRLTTLEIAVENDN 399 (922)
Q Consensus 347 ~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 399 (922)
.+++|++|+|++|.+. ..+.++..+++|+.|++++|...
T Consensus 170 ~l~~L~~L~Ls~N~L~--------------~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 170 GLENLDTLLLQENSLY--------------TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TCTTCCEEECCSSCCC--------------CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccceeecccCCCc--------------ccChhHCCCCCCCEEEecCCCCC
Confidence 9999999999999987 45677788999999999998743
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.69 E-value=1.1e-15 Score=160.26 Aligned_cols=99 Identities=22% Similarity=0.342 Sum_probs=43.9
Q ss_pred CccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccC-chhhhccCCCCEEEccCCCCCC-ccccCCCCcCCEEE
Q 002432 230 QLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSL-PSSIDLLVNLQTLCLDYSTLGD-ITIIGKLKNLEILS 307 (922)
Q Consensus 230 ~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~l-p~~i~~L~~L~~L~L~~~~l~~-p~~i~~L~~L~~L~ 307 (922)
++++|++++|.+. .+|+..|.++++|++|++++|.+..+ |..|.++++|++|++++|+++. |.. ....|+.|+
T Consensus 32 ~l~~L~Ls~N~i~---~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~--~~~~l~~L~ 106 (305)
T d1xkua_ 32 DTALLDLQNNKIT---EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK--MPKTLQELR 106 (305)
T ss_dssp TCCEEECCSSCCC---CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSS--CCTTCCEEE
T ss_pred CCCEEECcCCcCC---CcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccc--hhhhhhhhh
Confidence 4444444444433 34443344444555555555444444 2344444555555555544444 322 123444444
Q ss_pred eecCCCcccchh-hcCCCCCCEEeccC
Q 002432 308 LIESDIVEFPEE-LGKLTKLRLLDLTN 333 (922)
Q Consensus 308 L~~~~l~~lp~~-i~~L~~L~~L~l~~ 333 (922)
+.+|.+..++.. +.....++.++...
T Consensus 107 ~~~n~l~~l~~~~~~~~~~~~~l~~~~ 133 (305)
T d1xkua_ 107 VHENEITKVRKSVFNGLNQMIVVELGT 133 (305)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred ccccchhhhhhhhhhcccccccccccc
Confidence 444444444332 23344444444443
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.66 E-value=2.9e-16 Score=165.29 Aligned_cols=114 Identities=18% Similarity=0.301 Sum_probs=62.0
Q ss_pred CChHHhhCCCCCcEEEeeC-CcCc-cCchhhhccCCCCEEEccCCCCCC--ccccCCCCcCCEEEeecCCCc-ccchhhc
Q 002432 247 IPQRFFTGMRELKVVDLTN-MQLF-SLPSSIDLLVNLQTLCLDYSTLGD--ITIIGKLKNLEILSLIESDIV-EFPEELG 321 (922)
Q Consensus 247 l~~~~~~~l~~Lr~L~L~~-~~i~-~lp~~i~~L~~L~~L~L~~~~l~~--p~~i~~L~~L~~L~L~~~~l~-~lp~~i~ 321 (922)
+|.++ +++++|++|+|++ |.+. .+|.+|++|++|++|+|++|++.. +..+..+.+|+++++++|.+. .+|..++
T Consensus 68 lp~~l-~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~ 146 (313)
T d1ogqa_ 68 IPSSL-ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146 (313)
T ss_dssp CCGGG-GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG
T ss_pred CChHH-hcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhc
Confidence 44444 5566666666654 4444 455556666666666666665554 344555566666666655433 4455566
Q ss_pred CCCCCCEEeccCCCCCCccCcchhCCCCCC-CEEEccCCccc
Q 002432 322 KLTKLRLLDLTNCFHLKVIAPNVIASFTRL-EELYMSNCFVE 362 (922)
Q Consensus 322 ~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L-~~L~L~~~~~~ 362 (922)
++++|+++++++|...+.+|.. ++++.++ +.+++++|.+.
T Consensus 147 ~l~~L~~l~l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l~ 187 (313)
T d1ogqa_ 147 SLPNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp GCTTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEE
T ss_pred cCcccceeeccccccccccccc-ccccccccccccccccccc
Confidence 6666666666655433344444 4555443 55555555554
No 8
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.65 E-value=1.8e-16 Score=166.83 Aligned_cols=173 Identities=17% Similarity=0.231 Sum_probs=112.6
Q ss_pred CcceEEEeecCCCC---CCCCCC-CCCCccEEEccC-CCCcCCCCCChHHhhCCCCCcEEEeeCCcCccC-chhhhccCC
Q 002432 207 KKCYAISWIDSSGG---ELPEGL-ECPQLELLLLSS-EHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSL-PSSIDLLVN 280 (922)
Q Consensus 207 ~~l~~L~l~~~~~~---~l~~~~-~~~~Lr~L~l~~-~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~l-p~~i~~L~~ 280 (922)
.+++.|++.++.+. .+|+.+ ++++|++|++++ |... +.+|..+ +++++|++|++++|.+..+ |..+..+.+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~--g~iP~~i-~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~ 126 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV--GPIPPAI-AKLTQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEE--SCCCGGG-GGCTTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccc--ccccccc-ccccccchhhhccccccccccccccchhh
Confidence 35777777777664 355555 777777777775 4333 3577664 7777777777777777754 455777777
Q ss_pred CCEEEccCCCCCC--ccccCCCCcCCEEEeecCCCc-ccchhhcCCCCC-CEEeccCCCCCCccCcchhCCCCCCCEEEc
Q 002432 281 LQTLCLDYSTLGD--ITIIGKLKNLEILSLIESDIV-EFPEELGKLTKL-RLLDLTNCFHLKVIAPNVIASFTRLEELYM 356 (922)
Q Consensus 281 L~~L~L~~~~l~~--p~~i~~L~~L~~L~L~~~~l~-~lp~~i~~L~~L-~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L 356 (922)
|+++++++|.+.. |..++++++|+++++++|.+. .+|..+..+..+ +.+++++|. +...++..++++..+ .+++
T Consensus 127 L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~-l~~~~~~~~~~l~~~-~l~l 204 (313)
T d1ogqa_ 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR-LTGKIPPTFANLNLA-FVDL 204 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE-EEEECCGGGGGCCCS-EEEC
T ss_pred hcccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccc-ccccccccccccccc-cccc
Confidence 7777777777543 677777777777777777766 667777777665 667777765 444333335655444 5666
Q ss_pred cCCcccccccccCCcccccccCcccCCCCCCCCEEEeeecC
Q 002432 357 SNCFVEWKVEDEGSSSKKSKASLDELMPLPRLTTLEIAVEN 397 (922)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 397 (922)
..+.... ..+..+..+++++.+++.++.
T Consensus 205 ~~~~~~~-------------~~~~~~~~~~~l~~l~~~~~~ 232 (313)
T d1ogqa_ 205 SRNMLEG-------------DASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp CSSEEEE-------------CCGGGCCTTSCCSEEECCSSE
T ss_pred ccccccc-------------ccccccccccccccccccccc
Confidence 6665543 444556666777777766554
No 9
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.64 E-value=2.2e-14 Score=153.77 Aligned_cols=118 Identities=25% Similarity=0.288 Sum_probs=57.2
Q ss_pred CCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCCccccCCCCcCCEEEeecCCCcccchhhcCCCCCCEEeccCCC
Q 002432 256 RELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGDITIIGKLKNLEILSLIESDIVEFPEELGKLTKLRLLDLTNCF 335 (922)
Q Consensus 256 ~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~ 335 (922)
++|++|++++|+++++|+.+ .+|+.|++++|.++....+. +.|++|++++|.++.+|. ++++++|++|+++++.
T Consensus 58 ~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~lp--~~L~~L~L~~n~l~~lp~-~~~l~~L~~L~l~~~~ 131 (353)
T d1jl5a_ 58 PHLESLVASCNSLTELPELP---QSLKSLLVDNNNLKALSDLP--PLLEYLGVSNNQLEKLPE-LQNSSFLKIIDVDNNS 131 (353)
T ss_dssp TTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCSCC--TTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSC
T ss_pred CCCCEEECCCCCCcccccch---hhhhhhhhhhcccchhhhhc--cccccccccccccccccc-hhhhccceeecccccc
Confidence 34555555555555555433 34555555555544422111 245566666665555553 4555666666665543
Q ss_pred CCCccCcchhCCCCCCCEEEccCCcccccccccCCcccccccCcccCCCCCCCCEEEeeecCCC
Q 002432 336 HLKVIAPNVIASFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLPRLTTLEIAVENDN 399 (922)
Q Consensus 336 ~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 399 (922)
+...+.. ...+..+.+.++... ....++.++.++.|.+..+...
T Consensus 132 -~~~~~~~----~~~l~~l~~~~~~~~---------------~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 132 -LKKLPDL----PPSLEFIAAGNNQLE---------------ELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp -CSCCCCC----CTTCCEEECCSSCCS---------------SCCCCTTCTTCCEEECCSSCCS
T ss_pred -ccccccc----cccccchhhcccccc---------------ccccccccccceeccccccccc
Confidence 3333321 234444544433221 1234455555666665555433
No 10
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=2.7e-15 Score=146.89 Aligned_cols=165 Identities=27% Similarity=0.335 Sum_probs=142.3
Q ss_pred cCcceEEEeecCCCCCCCCCCCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEE
Q 002432 206 LKKCYAISWIDSSGGELPEGLECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLC 285 (922)
Q Consensus 206 ~~~l~~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~ 285 (922)
+.++++|.+.++.+..++....+++|++|++++|.+. .++. ++.+++|++|++++|.++.+| .+..+++|++|+
T Consensus 45 L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~---~l~~--~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLT---DIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCC---CCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCchhHhhCCCCCEEeCCCcccc---Cccc--cccCccccccccccccccccc-cccccccccccc
Confidence 5678999999999888876558999999999999765 5553 488999999999999999887 488999999999
Q ss_pred ccCCCCCCccccCCCCcCCEEEeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCcccccc
Q 002432 286 LDYSTLGDITIIGKLKNLEILSLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWKV 365 (922)
Q Consensus 286 L~~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~ 365 (922)
+++|.+..+..+..+++|+.+++++|.++..+ .+.++++|+++++++|. +..++. ++++++|++|++++|.+..
T Consensus 119 l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n~-l~~i~~--l~~l~~L~~L~Ls~N~i~~-- 192 (210)
T d1h6ta2 119 LEHNGISDINGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDNQ-ISDIVP--LAGLTKLQNLYLSKNHISD-- 192 (210)
T ss_dssp CTTSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCCB--
T ss_pred cccccccccccccccccccccccccccccccc-ccccccccccccccccc-cccccc--ccCCCCCCEEECCCCCCCC--
Confidence 99999888778899999999999999988764 57889999999999986 777765 8999999999999998762
Q ss_pred cccCCcccccccCcccCCCCCCCCEEEeee
Q 002432 366 EDEGSSSKKSKASLDELMPLPRLTTLEIAV 395 (922)
Q Consensus 366 ~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~ 395 (922)
+..+..+++|+.|++++
T Consensus 193 -------------l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 193 -------------LRALAGLKNLDVLELFS 209 (210)
T ss_dssp -------------CGGGTTCTTCSEEEEEE
T ss_pred -------------ChhhcCCCCCCEEEccC
Confidence 35688999999999975
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=4.8e-15 Score=153.23 Aligned_cols=197 Identities=24% Similarity=0.290 Sum_probs=166.2
Q ss_pred EEecCCCCCCCCCccccCcceEEEeecCCCCCCCCCC--CCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEee-CC
Q 002432 190 FLVRNGDVWEWPDEDALKKCYAISWIDSSGGELPEGL--ECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLT-NM 266 (922)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~--~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~-~~ 266 (922)
+...+.++..+|. .++..++.|++++|.+..++... ++++|++|++++|... .++...+..+..++.++.. .+
T Consensus 16 v~c~~~~L~~iP~-~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~---~i~~~~~~~~~~~~~l~~~~~~ 91 (284)
T d1ozna_ 16 TSCPQQGLQAVPV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA---RIDAAAFTGLALLEQLDLSDNA 91 (284)
T ss_dssp EECCSSCCSSCCT-TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC---EECTTTTTTCTTCCEEECCSCT
T ss_pred EEcCCCCCCccCC-CCCCCCCEEECcCCcCCCCCHHHhhcccccccccccccccc---cccccccccccccccccccccc
Confidence 4445556666665 56788999999999999998743 8999999999999876 6777777889999998875 45
Q ss_pred cCccC-chhhhccCCCCEEEccCCCCCC--ccccCCCCcCCEEEeecCCCcccch-hhcCCCCCCEEeccCCCCCCccCc
Q 002432 267 QLFSL-PSSIDLLVNLQTLCLDYSTLGD--ITIIGKLKNLEILSLIESDIVEFPE-ELGKLTKLRLLDLTNCFHLKVIAP 342 (922)
Q Consensus 267 ~i~~l-p~~i~~L~~L~~L~L~~~~l~~--p~~i~~L~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L~l~~~~~l~~~p~ 342 (922)
.++.+ |..+.++++|++|++++|.+.. +..+....+|+++++++|.++.+|. .+..+++|++|++++|. +..+++
T Consensus 92 ~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~-l~~l~~ 170 (284)
T d1ozna_ 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR-ISSVPE 170 (284)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-CCEECT
T ss_pred ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCc-ccccch
Confidence 66777 5679999999999999999876 4778889999999999999998865 47889999999999985 899988
Q ss_pred chhCCCCCCCEEEccCCcccccccccCCcccccccCcccCCCCCCCCEEEeeecCCCCCCcc
Q 002432 343 NVIASFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLPRLTTLEIAVENDNALPEG 404 (922)
Q Consensus 343 ~~l~~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~ 404 (922)
..+.++++|+++++++|.+.. ..+..+..+++|++|+++.|....++..
T Consensus 171 ~~f~~l~~L~~l~l~~N~l~~-------------i~~~~f~~l~~L~~L~l~~N~i~~~~~~ 219 (284)
T d1ozna_ 171 RAFRGLHSLDRLLLHQNRVAH-------------VHPHAFRDLGRLMTLYLFANNLSALPTE 219 (284)
T ss_dssp TTTTTCTTCCEEECCSSCCCE-------------ECTTTTTTCTTCCEEECCSSCCSCCCHH
T ss_pred hhhccccccchhhhhhccccc-------------cChhHhhhhhhccccccccccccccccc
Confidence 889999999999999998875 4467889999999999999998877754
No 12
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=3.1e-15 Score=145.18 Aligned_cols=161 Identities=23% Similarity=0.268 Sum_probs=116.7
Q ss_pred cCcceEEEeecCCCCCCCCCCCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEE
Q 002432 206 LKKCYAISWIDSSGGELPEGLECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLC 285 (922)
Q Consensus 206 ~~~l~~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~ 285 (922)
..+++.|++.++.+..++....+++|++|++++|... .+++ |+++++|++|++++|.+..+|. +.++++|++|+
T Consensus 39 l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~---~~~~--l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLT---DITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCC---CCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCCCccccccCCCcCcCcccccccc---Cccc--ccCCcccccccccccccccccc-ccccccccccc
Confidence 4677888888888777765447778888888887654 4443 5778888888888887777764 77778888888
Q ss_pred ccCCCCCCccccCCCCcCCEEEeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCcccccc
Q 002432 286 LDYSTLGDITIIGKLKNLEILSLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWKV 365 (922)
Q Consensus 286 L~~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~ 365 (922)
+++|.+.....+..+++|++|++++|++..+| .+..+++|++|++.+|. +..++. ++++++|++|++++|.+..
T Consensus 113 l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~-l~~l~~--l~~l~~L~~L~ls~N~i~~-- 186 (199)
T d2omxa2 113 LFNNQITDIDPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQ-VTDLKP--LANLTTLERLDISSNKVSD-- 186 (199)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCCC--
T ss_pred ccccccccccccchhhhhHHhhhhhhhhcccc-ccccccccccccccccc-ccCCcc--ccCCCCCCEEECCCCCCCC--
Confidence 88777766666777888888888888777665 47777888888888774 666654 7778888888888776652
Q ss_pred cccCCcccccccCcccCCCCCCCCEE
Q 002432 366 EDEGSSSKKSKASLDELMPLPRLTTL 391 (922)
Q Consensus 366 ~~~~~~~~~~~~~~~~l~~l~~L~~L 391 (922)
+..++.+++|++|
T Consensus 187 -------------i~~l~~L~~L~~L 199 (199)
T d2omxa2 187 -------------ISVLAKLTNLESL 199 (199)
T ss_dssp -------------CGGGGGCTTCSEE
T ss_pred -------------CccccCCCCCCcC
Confidence 3446666676664
No 13
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.61 E-value=3.5e-15 Score=144.83 Aligned_cols=161 Identities=24% Similarity=0.312 Sum_probs=137.1
Q ss_pred CCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCCccccCCCCcCCEE
Q 002432 227 ECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGDITIIGKLKNLEIL 306 (922)
Q Consensus 227 ~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~p~~i~~L~~L~~L 306 (922)
++.+++.|+++++.+. .+.. ++.+++|++|++++|+++.++. ++++++|++|++++|.+.....++++++|++|
T Consensus 38 ~l~~l~~L~l~~~~i~---~l~~--l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIK---SIDG--VEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCC---CCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCC---Cccc--cccCCCcCcCccccccccCccc-ccCCcccccccccccccccccccccccccccc
Confidence 5789999999999875 5543 4889999999999999998875 99999999999999999886679999999999
Q ss_pred EeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCcccccccccCCcccccccCcccCCCCC
Q 002432 307 SLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLP 386 (922)
Q Consensus 307 ~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 386 (922)
+++++.+..++ .+.++++|+.|++++|. +..++. +..+++|++|++.+|.+.. +..+++++
T Consensus 112 ~l~~~~~~~~~-~~~~l~~L~~L~l~~n~-l~~~~~--l~~~~~L~~L~l~~n~l~~---------------l~~l~~l~ 172 (199)
T d2omxa2 112 TLFNNQITDID-PLKNLTNLNRLELSSNT-ISDISA--LSGLTSLQQLNFSSNQVTD---------------LKPLANLT 172 (199)
T ss_dssp ECCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCSEEECCSSCCCC---------------CGGGTTCT
T ss_pred ccccccccccc-ccchhhhhHHhhhhhhh-hccccc--ccccccccccccccccccC---------------CccccCCC
Confidence 99999887764 58899999999999986 777764 8999999999999998763 35688999
Q ss_pred CCCEEEeeecCCCCCCccccccccce
Q 002432 387 RLTTLEIAVENDNALPEGFFVRELER 412 (922)
Q Consensus 387 ~L~~L~l~~~~~~~~~~~~~~~~L~~ 412 (922)
+|++|++++|....++.-..+++|+.
T Consensus 173 ~L~~L~ls~N~i~~i~~l~~L~~L~~ 198 (199)
T d2omxa2 173 TLERLDISSNKVSDISVLAKLTNLES 198 (199)
T ss_dssp TCCEEECCSSCCCCCGGGGGCTTCSE
T ss_pred CCCEEECCCCCCCCCccccCCCCCCc
Confidence 99999999999887764335555554
No 14
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=9.7e-15 Score=150.88 Aligned_cols=173 Identities=18% Similarity=0.214 Sum_probs=137.7
Q ss_pred EEEeecCCCCCCCCCCCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCc-hhhhccCCCCEEEccCC
Q 002432 211 AISWIDSSGGELPEGLECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLP-SSIDLLVNLQTLCLDYS 289 (922)
Q Consensus 211 ~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp-~~i~~L~~L~~L~L~~~ 289 (922)
.+...++.+..+|..+. +.+++|++++|.+. .+|...|.++++|++|+++++.+..++ ..+..+..++.++...+
T Consensus 15 ~v~c~~~~L~~iP~~ip-~~~~~L~Ls~N~i~---~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~ 90 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGIP-AASQRIFLHGNRIS---HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (284)
T ss_dssp EEECCSSCCSSCCTTCC-TTCSEEECTTSCCC---EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCCCccCCCCC-CCCCEEECcCCcCC---CCCHHHhhccccccccccccccccccccccccccccccccccccc
Confidence 34566667777876542 57899999999876 788877899999999999999998764 45677888888877644
Q ss_pred -CCCC--ccccCCCCcCCEEEeecCCCcccch-hhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCcccccc
Q 002432 290 -TLGD--ITIIGKLKNLEILSLIESDIVEFPE-ELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWKV 365 (922)
Q Consensus 290 -~l~~--p~~i~~L~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~ 365 (922)
.+.. +..|.++++|++|++++|.+..++. .+....+|+.+++++|. ++.+|.+.++.+++|++|++++|.+..
T Consensus 91 ~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~-l~~i~~~~f~~~~~L~~L~l~~N~l~~-- 167 (284)
T d1ozna_ 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA-LQALPDDTFRDLGNLTHLFLHGNRISS-- 167 (284)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCE--
T ss_pred cccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccc-ccccChhHhccccchhhcccccCcccc--
Confidence 4665 5788999999999999998886654 46788899999999985 888887778889999999999998764
Q ss_pred cccCCcccccccCcccCCCCCCCCEEEeeecCCCCC
Q 002432 366 EDEGSSSKKSKASLDELMPLPRLTTLEIAVENDNAL 401 (922)
Q Consensus 366 ~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~ 401 (922)
.....+..+++|+.+.+++|....+
T Consensus 168 -----------l~~~~f~~l~~L~~l~l~~N~l~~i 192 (284)
T d1ozna_ 168 -----------VPERAFRGLHSLDRLLLHQNRVAHV 192 (284)
T ss_dssp -----------ECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred -----------cchhhhccccccchhhhhhcccccc
Confidence 3346778889999999988876543
No 15
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.56 E-value=4.1e-13 Score=143.62 Aligned_cols=137 Identities=19% Similarity=0.255 Sum_probs=101.8
Q ss_pred cceEEEeecCCCCCCCCCCCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEcc
Q 002432 208 KCYAISWIDSSGGELPEGLECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLD 287 (922)
Q Consensus 208 ~l~~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~ 287 (922)
++++|+++++.+..+|+. .++|++|++++|.+. .+|+. +.+|+.|++++|.++.++.-. ..|++|+++
T Consensus 39 ~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~---~lp~~----~~~L~~L~l~~n~l~~l~~lp---~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL--PPHLESLVASCNSLT---ELPEL----PQSLKSLLVDNNNLKALSDLP---PLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSCCCSC--CTTCSEEECCSSCCS---SCCCC----CTTCCEEECCSSCCSCCCSCC---TTCCEEECC
T ss_pred CCCEEEeCCCCCCCCCCC--CCCCCEEECCCCCCc---ccccc----hhhhhhhhhhhcccchhhhhc---ccccccccc
Confidence 467888888888888864 468999999988776 67743 468899999999888776421 368999999
Q ss_pred CCCCCCccccCCCCcCCEEEeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCccc
Q 002432 288 YSTLGDITIIGKLKNLEILSLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVE 362 (922)
Q Consensus 288 ~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~ 362 (922)
+|.+...+.++.+++|++|+++++.+...|.. ...+..+.+..+. ..... . ++.++.++.|++.++...
T Consensus 107 ~n~l~~lp~~~~l~~L~~L~l~~~~~~~~~~~---~~~l~~l~~~~~~-~~~~~-~-l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 107 NNQLEKLPELQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNNQ-LEELP-E-LQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SSCCSSCCCCTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSC-CSSCC-C-CTTCTTCCEEECCSSCCS
T ss_pred ccccccccchhhhccceeeccccccccccccc---cccccchhhcccc-ccccc-c-ccccccceeccccccccc
Confidence 99988844578899999999998888766643 4556677776654 22222 2 778888888888877654
No 16
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.56 E-value=2.2e-16 Score=161.08 Aligned_cols=100 Identities=15% Similarity=0.133 Sum_probs=85.7
Q ss_pred ceEeCCCCCHHHHHHHHHHHhCCCCCChhhHHHHHHHHHHhCCCcchHHHHHHHhhcCCCHHHHHHHHHHhcCCCCCCCc
Q 002432 5 ANFSIEILNEEEAWRLFEVKLGNDDLIPRMKSTATHIVKECGGLPIAIEPIAKALRNKTESECWKNALHELRMPTENNFH 84 (922)
Q Consensus 5 ~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~i~~~c~glPlai~~~g~~L~~~~~~~~W~~~l~~~~~~~~~~~~ 84 (922)
++|++++|+.+|||+||+++|+....++..++++++||++|+|+||||+++|+.|+.+ +.+.|.++.+.+. .
T Consensus 178 ~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k-~~~~~~~~~~~L~----~--- 249 (277)
T d2a5yb3 178 EFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKSCEPK-TFEKMAQLNNKLE----S--- 249 (277)
T ss_dssp EEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS-SHHHHHHHHHHHH----H---
T ss_pred ceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHHHHHHhccC-CHHHHHHHHHHHh----c---
Confidence 6799999999999999999996555566779999999999999999999999999988 7889999888775 1
Q ss_pred cchHHHHHHHHHHHhcCCchhHHHHHhhc
Q 002432 85 RELGKAYTAIKLSYDALKGEQLKKIFQLC 113 (922)
Q Consensus 85 ~~~~~~~~~l~lsY~~L~~~~lk~cfly~ 113 (922)
....++++++.+||++||++ +|+||-++
T Consensus 250 ~~~~~v~~il~~sY~~L~~~-lk~c~~~l 277 (277)
T d2a5yb3 250 RGLVGVECITPYSYKSLAMA-LQRCVEVL 277 (277)
T ss_dssp HCSSTTCCCSSSSSSSHHHH-HHHHHHTS
T ss_pred CcHHHHHHHHHHHHhcccHH-HHHHHHhC
Confidence 12334888999999999999 99999863
No 17
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.55 E-value=5.1e-14 Score=137.65 Aligned_cols=164 Identities=20% Similarity=0.257 Sum_probs=138.4
Q ss_pred CCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCCccccCCCCcCCEE
Q 002432 227 ECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGDITIIGKLKNLEIL 306 (922)
Q Consensus 227 ~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~p~~i~~L~~L~~L 306 (922)
++..|+.|+++++.+. .++. +..+++|++|++++|.++.++. ++.+++|++|++++|+++.++.+..+++|++|
T Consensus 44 ~L~~L~~L~l~~~~i~---~l~~--l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L 117 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIK---SVQG--IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSSLKDLKKLKSL 117 (210)
T ss_dssp HHHTCCEEECTTSCCC---CCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEE
T ss_pred HhcCccEEECcCCCCC---Cchh--HhhCCCCCEEeCCCccccCccc-cccCcccccccccccccccccccccccccccc
Confidence 4678999999999765 4543 4889999999999999999874 78999999999999999996679999999999
Q ss_pred EeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCcccccccccCCcccccccCcccCCCCC
Q 002432 307 SLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLP 386 (922)
Q Consensus 307 ~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 386 (922)
++++|.+..++ .+.++++|+.+++++|. +...+. ++++++|+++++++|.+.. +..+.+++
T Consensus 118 ~l~~~~~~~~~-~l~~l~~l~~l~~~~n~-l~~~~~--~~~l~~L~~l~l~~n~l~~---------------i~~l~~l~ 178 (210)
T d1h6ta2 118 SLEHNGISDIN-GLVHLPQLESLYLGNNK-ITDITV--LSRLTKLDTLSLEDNQISD---------------IVPLAGLT 178 (210)
T ss_dssp ECTTSCCCCCG-GGGGCTTCCEEECCSSC-CCCCGG--GGGCTTCSEEECCSSCCCC---------------CGGGTTCT
T ss_pred ccccccccccc-ccccccccccccccccc-cccccc--ccccccccccccccccccc---------------cccccCCC
Confidence 99999888775 58999999999999985 776654 7889999999999998763 34588999
Q ss_pred CCCEEEeeecCCCCCCccccccccceeEE
Q 002432 387 RLTTLEIAVENDNALPEGFFVRELERFKI 415 (922)
Q Consensus 387 ~L~~L~l~~~~~~~~~~~~~~~~L~~l~~ 415 (922)
+|++|++++|.+..++.-..+++|+.|.+
T Consensus 179 ~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L 207 (210)
T d1h6ta2 179 KLQNLYLSKNHISDLRALAGLKNLDVLEL 207 (210)
T ss_dssp TCCEEECCSSCCCBCGGGTTCTTCSEEEE
T ss_pred CCCEEECCCCCCCCChhhcCCCCCCEEEc
Confidence 99999999999887764335666666654
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.53 E-value=1.1e-13 Score=137.47 Aligned_cols=186 Identities=19% Similarity=0.243 Sum_probs=147.8
Q ss_pred ccCcceEEEeecCCCCCCCCCCCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEE
Q 002432 205 ALKKCYAISWIDSSGGELPEGLECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTL 284 (922)
Q Consensus 205 ~~~~l~~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L 284 (922)
...+++.|++.+|.+..++....+++|+.|++++|.+. .+++ |.++++|+++++++|.++.++ .+.++++|+++
T Consensus 39 ~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~---~~~~--l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l 112 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQIT---DLAP--LKNLTKITELELSGNPLKNVS-AIAGLQSIKTL 112 (227)
T ss_dssp HHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCC---CCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEE
T ss_pred HcCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceee---cccc--ccccccccccccccccccccc-ccccccccccc
Confidence 35678999999999988876558999999999998765 4443 688999999999999988875 48889999999
Q ss_pred EccCCCCCCccccCCCCcCCEEEeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCccccc
Q 002432 285 CLDYSTLGDITIIGKLKNLEILSLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVEWK 364 (922)
Q Consensus 285 ~L~~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~ 364 (922)
+++++.......+.....++.+.++++.+...+ .+.+.++|++|++++|. +...+. ++++++|++|++++|.+..
T Consensus 113 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~L~~L~l~~n~-~~~~~~--l~~l~~L~~L~Ls~n~l~~- 187 (227)
T d1h6ua2 113 DLTSTQITDVTPLAGLSNLQVLYLDLNQITNIS-PLAGLTNLQYLSIGNAQ-VSDLTP--LANLSKLTTLKADDNKISD- 187 (227)
T ss_dssp ECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCCC-
T ss_pred ccccccccccchhccccchhhhhchhhhhchhh-hhccccccccccccccc-cccchh--hcccccceecccCCCccCC-
Confidence 999988877777888899999999888777553 47788899999998875 655544 7889999999999887652
Q ss_pred ccccCCcccccccCcccCCCCCCCCEEEeeecCCCCCCccccccccceeEE
Q 002432 365 VEDEGSSSKKSKASLDELMPLPRLTTLEIAVENDNALPEGFFVRELERFKI 415 (922)
Q Consensus 365 ~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~L~~l~~ 415 (922)
+..++.+++|++|++++|....++..-.+++|+.+.+
T Consensus 188 --------------l~~l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~l 224 (227)
T d1h6ua2 188 --------------ISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTL 224 (227)
T ss_dssp --------------CGGGGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEE
T ss_pred --------------ChhhcCCCCCCEEECcCCcCCCCcccccCCCCCEEEe
Confidence 3457788899999999988777765335555655543
No 19
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.50 E-value=3.9e-13 Score=133.37 Aligned_cols=179 Identities=23% Similarity=0.298 Sum_probs=151.2
Q ss_pred ecCCCCCCCCCccccCcceEEEeecCCCCCCCCCCCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccC
Q 002432 192 VRNGDVWEWPDEDALKKCYAISWIDSSGGELPEGLECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSL 271 (922)
Q Consensus 192 ~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~l 271 (922)
..+.++..++.....+++++|++++|.+..+++...+++++.+++++|... .++. |.++++|++++++++....+
T Consensus 48 l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~---~i~~--l~~l~~L~~l~l~~~~~~~~ 122 (227)
T d1h6ua2 48 AFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLK---NVSA--IAGLQSIKTLDLTSTQITDV 122 (227)
T ss_dssp CTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCS---CCGG--GTTCTTCCEEECTTSCCCCC
T ss_pred CCCCCCCcchhHhcCCCCcEeecCCceeecccccccccccccccccccccc---cccc--cccccccccccccccccccc
Confidence 444455556666778999999999999988877779999999999998765 5543 58999999999999988766
Q ss_pred chhhhccCCCCEEEccCCCCCCccccCCCCcCCEEEeecCCCcccchhhcCCCCCCEEeccCCCCCCccCcchhCCCCCC
Q 002432 272 PSSIDLLVNLQTLCLDYSTLGDITIIGKLKNLEILSLIESDIVEFPEELGKLTKLRLLDLTNCFHLKVIAPNVIASFTRL 351 (922)
Q Consensus 272 p~~i~~L~~L~~L~L~~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L 351 (922)
+. +.....++++.++.+.+.....+.+.++|++|++++|.++..+ .++++++|++|++++|. ++.++. ++++++|
T Consensus 123 ~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~Ls~n~-l~~l~~--l~~l~~L 197 (227)
T d1h6ua2 123 TP-LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT-PLANLSKLTTLKADDNK-ISDISP--LASLPNL 197 (227)
T ss_dssp GG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSC-CCCCGG--GGGCTTC
T ss_pred ch-hccccchhhhhchhhhhchhhhhccccccccccccccccccch-hhcccccceecccCCCc-cCCChh--hcCCCCC
Confidence 44 6678899999999999888666888999999999999888765 48999999999999985 888875 8999999
Q ss_pred CEEEccCCcccccccccCCcccccccCcccCCCCCCCCEEEeee
Q 002432 352 EELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLPRLTTLEIAV 395 (922)
Q Consensus 352 ~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~ 395 (922)
++|++++|++.. +..++++++|+.|+++.
T Consensus 198 ~~L~Ls~N~lt~---------------i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 198 IEVHLKNNQISD---------------VSPLANTSNLFIVTLTN 226 (227)
T ss_dssp CEEECTTSCCCB---------------CGGGTTCTTCCEEEEEE
T ss_pred CEEECcCCcCCC---------------CcccccCCCCCEEEeeC
Confidence 999999998763 34588999999999974
No 20
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46 E-value=9.5e-14 Score=122.04 Aligned_cols=101 Identities=23% Similarity=0.256 Sum_probs=59.6
Q ss_pred cEEEeeCCcCccCchhhhccCCCCEEEccCCCCCC-ccccCCCCcCCEEEeecCCCcccchhhcCCCCCCEEeccCCCCC
Q 002432 259 KVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGD-ITIIGKLKNLEILSLIESDIVEFPEELGKLTKLRLLDLTNCFHL 337 (922)
Q Consensus 259 r~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~-p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l 337 (922)
|+|+|++|+++.+|. ++.+.+|++|++++|.++. |+.++.+++|++|++++|.++.+| +++++++|++|++++|. +
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~-i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNR-L 77 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSC-C
T ss_pred CEEEcCCCCCCCCcc-cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCCc-c
Confidence 456666666665543 5566666666666666655 555666666666666666666554 35666666666666654 5
Q ss_pred CccCc-chhCCCCCCCEEEccCCccc
Q 002432 338 KVIAP-NVIASFTRLEELYMSNCFVE 362 (922)
Q Consensus 338 ~~~p~-~~l~~L~~L~~L~L~~~~~~ 362 (922)
..++. ..++.+++|+.|++++|.+.
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCC
Confidence 54442 23556666666666666554
No 21
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.44 E-value=2.2e-13 Score=119.65 Aligned_cols=117 Identities=18% Similarity=0.236 Sum_probs=96.0
Q ss_pred cEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCCccccCCCCcCCEEEeecC
Q 002432 232 ELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGDITIIGKLKNLEILSLIES 311 (922)
Q Consensus 232 r~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~p~~i~~L~~L~~L~L~~~ 311 (922)
|+|++++|... .++. +..+++|++|++++|.++.+|+.++.+++|++|++++|.++.++.++++++|++|++++|
T Consensus 1 R~L~Ls~n~l~---~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT---VLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS---SCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC---CCcc--cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCccccccccCeEECCCC
Confidence 67888888776 5654 588999999999999999999889999999999999999998667999999999999999
Q ss_pred CCcccc--hhhcCCCCCCEEeccCCCCCCcc---CcchhCCCCCCCEE
Q 002432 312 DIVEFP--EELGKLTKLRLLDLTNCFHLKVI---APNVIASFTRLEEL 354 (922)
Q Consensus 312 ~l~~lp--~~i~~L~~L~~L~l~~~~~l~~~---p~~~l~~L~~L~~L 354 (922)
+++.+| ..++++++|++|++++|. +... +...+..+++|+.|
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~-i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNS-LCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSG-GGGSSSCTTHHHHHCTTCSEE
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCc-CCcCccHHHHHHHHCcCcceE
Confidence 998776 358899999999999985 5443 33334456777665
No 22
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=9.6e-14 Score=128.63 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=80.6
Q ss_pred hhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCCccccCCCCcCCEEEeecCCCcccchh-hcCCCCCCEEe
Q 002432 252 FTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGDITIIGKLKNLEILSLIESDIVEFPEE-LGKLTKLRLLD 330 (922)
Q Consensus 252 ~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp~~-i~~L~~L~~L~ 330 (922)
|.+...+|.|+|++|+|+.+|..+..+.+|++|++++|.|+..+.+..+++|++|++++|+++.+|.+ +..+++|++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccCCcccCcchhhhhcccccccCCCccccccccccccce
Confidence 35666778888888888777766667777888888888777755677778888888888887777655 35677888888
Q ss_pred ccCCCCCCccCc-chhCCCCCCCEEEccCCccc
Q 002432 331 LTNCFHLKVIAP-NVIASFTRLEELYMSNCFVE 362 (922)
Q Consensus 331 l~~~~~l~~~p~-~~l~~L~~L~~L~L~~~~~~ 362 (922)
+++|. +..++. ..+..+++|++|++++|.+.
T Consensus 94 L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 94 LTNNS-LVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CCSCC-CCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ecccc-ccccccccccccccccchhhcCCCccc
Confidence 88775 666653 33677788888888877765
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=1.2e-13 Score=127.94 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=87.6
Q ss_pred CCCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCC-c-cccCCCCcC
Q 002432 226 LECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGD-I-TIIGKLKNL 303 (922)
Q Consensus 226 ~~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~-p-~~i~~L~~L 303 (922)
.+..++|.|++++|.+. .++ ..+..+++|++|++++|.|+.++ .+..+++|++|++++|.+.. + ..+..+++|
T Consensus 15 ~n~~~lr~L~L~~n~I~---~i~-~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIP---VIE-NLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp ECTTSCEEEECTTSCCC---SCC-CGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCcCcCcEEECCCCCCC---ccC-ccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 35566777777777665 554 34466778888888888887774 47777888888888888776 4 335667888
Q ss_pred CEEEeecCCCcccch--hhcCCCCCCEEeccCCCCCCccCc---chhCCCCCCCEEE
Q 002432 304 EILSLIESDIVEFPE--ELGKLTKLRLLDLTNCFHLKVIAP---NVIASFTRLEELY 355 (922)
Q Consensus 304 ~~L~L~~~~l~~lp~--~i~~L~~L~~L~l~~~~~l~~~p~---~~l~~L~~L~~L~ 355 (922)
++|++++|+++.++. .+..+++|++|++++|. +...|. ..++.+++|+.|+
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEET
T ss_pred ccceeccccccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeC
Confidence 888888887776653 46777888888888875 555552 2366777887776
No 24
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=1.5e-12 Score=130.74 Aligned_cols=208 Identities=17% Similarity=0.147 Sum_probs=139.0
Q ss_pred CCCcceeeecccceeeeccCCCcccccCccEEEeccCcCccccccHHHHhhhccccEEEEecccccceEecccCCCCCCC
Q 002432 652 LPNLEALELCEINVKSIWHNQTPCCFQRLTRLIVWGCQKLKFMFYASMIKSLEQLQHLEIRNCTGLQVIISEGGPGQEPP 731 (922)
Q Consensus 652 l~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~C~~L~~l~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~~~ 731 (922)
++++++|++++|.++.++...+ ..+++|++|+++++.....+ +...+.+++.++++.+..|+++..+... .
T Consensus 28 ~~~l~~L~Ls~n~i~~l~~~~f-~~l~~L~~L~ls~n~~~~~i-~~~~f~~l~~l~~l~~~~~n~l~~~~~~-------~ 98 (242)
T d1xwdc1 28 PRNAIELRFVLTKLRVIQKGAF-SGFGDLEKIEISQNDVLEVI-EADVFSNLPKLHEIRIEKANNLLYINPE-------A 98 (242)
T ss_dssp CSCCSEEEEESCCCCEECTTTT-TTCTTCCEEEEESCTTCCEE-CSSSEESCTTCCEEEEECCTTCCEECTT-------S
T ss_pred CCCCCEEECcCCcCCccChhHh-hccchhhhhhhcccccccee-eccccccccccccccccccccccccccc-------c
Confidence 3578889999888888765543 45788999999887655544 3345677888899888888777776421 2
Q ss_pred cccccccceeecccCCCccccCCCcCcCCCCCccEEEE--ecCCCccccccccccccccccccccCCCCCcceeecc-cc
Q 002432 732 CFAFRRVTNISLCHLPELTCLYPGLHTSEWPELKKLEV--FSCDKLNTFASESFSFHSNEKKQLHVPKQPFFSFEKI-FP 808 (922)
Q Consensus 732 ~~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l--~~c~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 808 (922)
+..+++|+.+.+.++ .+...+.... +.+++.+.+ .++..+..++... +.. ..
T Consensus 99 ~~~l~~L~~l~l~~~-~l~~~~~~~~---~~~l~~l~~~~~~n~~l~~i~~~~---------------------~~~~~~ 153 (242)
T d1xwdc1 99 FQNLPNLQYLLISNT-GIKHLPDVHK---IHSLQKVLLDIQDNINIHTIERNS---------------------FVGLSF 153 (242)
T ss_dssp EECCTTCCEEEEESC-CCCSCCCCTT---TCBSSCEEEEEESCTTCCEECTTS---------------------STTSBS
T ss_pred ccccccccccccchh-hhcccccccc---cccccccccccccccccccccccc---------------------cccccc
Confidence 234788888888886 3444443322 334444432 2334566664431 122 34
Q ss_pred CcceEeechhhhhhhcCCCCCCCCCCCCccEEEe-ecCCCcccchhHHhhcCCCCeEEEecccceEEecCCccccccceE
Q 002432 809 NLEELGLSIKDIMMLLQGDFPQDHLFGSLKDLEV-RDDDSASVPIGLLEKFHGLENLNLSFCSYKELFSNGGQVHLIKKL 887 (922)
Q Consensus 809 ~L~~L~l~~~~~~~~~~~~~~~~~~~~sL~~L~l-~~~~l~~lp~~~l~~l~~L~~L~l~~c~l~~l~~~~~~~~sL~~L 887 (922)
.++.|++++|++..+.+..+. .++++.+.. ++|.++.+|.+.++++++|++|++++|++..+++.. +.+|..|
T Consensus 154 ~l~~L~l~~n~l~~i~~~~~~----~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~--~~~l~~L 227 (242)
T d1xwdc1 154 ESVILWLNKNGIQEIHNCAFN----GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKL 227 (242)
T ss_dssp SCEEEECCSSCCCEECTTTTT----TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSS--CTTCCEE
T ss_pred cceeeeccccccccccccccc----chhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHH--HcCCccc
Confidence 788899999888776654433 345555554 448899999888889999999999999998886543 4556666
Q ss_pred eccccccccccc
Q 002432 888 ELICLNDLEYLW 899 (922)
Q Consensus 888 ~i~~c~~L~~l~ 899 (922)
..-++.+++.+|
T Consensus 228 ~~l~~~~l~~lp 239 (242)
T d1xwdc1 228 RARSTYNLKKLP 239 (242)
T ss_dssp ESSSEESSSCSC
T ss_pred ccCcCCCCCcCC
Confidence 555566666665
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.35 E-value=1.9e-12 Score=124.26 Aligned_cols=123 Identities=17% Similarity=0.174 Sum_probs=69.4
Q ss_pred EEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCcc-C-chhhhccCCCCEEEccCCCCCC--ccccCCCCcCCEEEe
Q 002432 233 LLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFS-L-PSSIDLLVNLQTLCLDYSTLGD--ITIIGKLKNLEILSL 308 (922)
Q Consensus 233 ~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~-l-p~~i~~L~~L~~L~L~~~~l~~--p~~i~~L~~L~~L~L 308 (922)
+++.+++... .+|.++ ..++++|+|++|.|+. + +..|.++++|++|++++|.+.. +..+..+++|++|++
T Consensus 12 ~v~Cs~~~L~---~iP~~l---p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 12 TVDCTGRGLK---EIPRDI---PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp EEECTTSCCS---SCCSCC---CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred EEEEeCCCcC---ccCCCC---CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeee
Confidence 4444444433 455433 2455666666666653 3 2345566666666666666554 355566666666666
Q ss_pred ecCCCcccchh-hcCCCCCCEEeccCCCCCCccCcchhCCCCCCCEEEccCCccc
Q 002432 309 IESDIVEFPEE-LGKLTKLRLLDLTNCFHLKVIAPNVIASFTRLEELYMSNCFVE 362 (922)
Q Consensus 309 ~~~~l~~lp~~-i~~L~~L~~L~l~~~~~l~~~p~~~l~~L~~L~~L~L~~~~~~ 362 (922)
++|+++.+|.. |.++++|++|++++|. +..+|++.|..+++|++|+|++|.+.
T Consensus 86 s~N~l~~l~~~~F~~l~~L~~L~L~~N~-l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 86 GENKIKEISNKMFLGLHQLKTLNLYDNQ-ISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSC-CCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ccccccccCHHHHhCCCcccccccCCcc-ccccCHHHhcCCcccccccccccccc
Confidence 66666655433 5666666666666654 66665555566666666666655443
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=6.2e-13 Score=136.48 Aligned_cols=102 Identities=22% Similarity=0.223 Sum_probs=52.8
Q ss_pred CcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCC---ccccCCCCcCCEEEeecCCCc-ccchhhcCCCCCCEEeccC
Q 002432 258 LKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGD---ITIIGKLKNLEILSLIESDIV-EFPEELGKLTKLRLLDLTN 333 (922)
Q Consensus 258 Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~---p~~i~~L~~L~~L~L~~~~l~-~lp~~i~~L~~L~~L~l~~ 333 (922)
...+.++...+...........+|++||+++|.+.. ...+..+++|++|++++|.++ ..+..++++++|++|++++
T Consensus 25 ~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~ 104 (284)
T d2astb2 25 VIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 104 (284)
T ss_dssp CSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred ceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccc
Confidence 344555444433322223344566666666665543 234556666666666666554 3344556666666666666
Q ss_pred CCCCCccCcc-hhCCCCCCCEEEccCC
Q 002432 334 CFHLKVIAPN-VIASFTRLEELYMSNC 359 (922)
Q Consensus 334 ~~~l~~~p~~-~l~~L~~L~~L~L~~~ 359 (922)
|..++...-. ...++++|++|++++|
T Consensus 105 c~~itd~~l~~l~~~~~~L~~L~ls~c 131 (284)
T d2astb2 105 CSGFSEFALQTLLSSCSRLDELNLSWC 131 (284)
T ss_dssp CBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred cccccccccchhhHHHHhccccccccc
Confidence 5544432111 1234566666666554
No 27
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.34 E-value=2.2e-12 Score=123.88 Aligned_cols=127 Identities=21% Similarity=0.277 Sum_probs=111.6
Q ss_pred CcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCC---ccccCCCCcCCEEEeecCCCcccc-hhhcCCCCCCEEeccC
Q 002432 258 LKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGD---ITIIGKLKNLEILSLIESDIVEFP-EELGKLTKLRLLDLTN 333 (922)
Q Consensus 258 Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~---p~~i~~L~~L~~L~L~~~~l~~lp-~~i~~L~~L~~L~l~~ 333 (922)
.++++.++++++.+|..+. .++++|+|++|.|.. +..|.++++|++|++++|.+..++ ..+..+++|++|++++
T Consensus 10 ~~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 4689999999999998775 689999999999975 477899999999999999999765 4588999999999999
Q ss_pred CCCCCccCcchhCCCCCCCEEEccCCcccccccccCCcccccccCcccCCCCCCCCEEEeeecCCCC
Q 002432 334 CFHLKVIAPNVIASFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELMPLPRLTTLEIAVENDNA 400 (922)
Q Consensus 334 ~~~l~~~p~~~l~~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 400 (922)
|. +..+|++.|.++++|++|+|++|.+.. .....+..+++|++|++++|....
T Consensus 88 N~-l~~l~~~~F~~l~~L~~L~L~~N~l~~-------------i~~~~f~~l~~L~~l~L~~N~~~~ 140 (192)
T d1w8aa_ 88 NK-IKEISNKMFLGLHQLKTLNLYDNQISC-------------VMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CC-CCEECSSSSTTCTTCCEEECCSSCCCE-------------ECTTSSTTCTTCCEEECTTCCBCC
T ss_pred cc-ccccCHHHHhCCCcccccccCCccccc-------------cCHHHhcCCccccccccccccccc
Confidence 86 999998889999999999999999884 334678899999999999987654
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=7e-12 Score=125.69 Aligned_cols=97 Identities=13% Similarity=0.254 Sum_probs=46.8
Q ss_pred cEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCch-hhhccCCCCEEEccCCCCCC---ccccCCCCcCCEEE
Q 002432 232 ELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPS-SIDLLVNLQTLCLDYSTLGD---ITIIGKLKNLEILS 307 (922)
Q Consensus 232 r~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~l~~---p~~i~~L~~L~~L~ 307 (922)
++++.++.... .+|++++ +++++|++++|.|+.+|. .|.++++|++|++++|.+.. +..|.+++++++|+
T Consensus 11 ~~i~c~~~~l~---~iP~~l~---~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~ 84 (242)
T d1xwdc1 11 RVFLCQESKVT---EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 84 (242)
T ss_dssp SEEEEESCSCS---SCCSCSC---SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEE
T ss_pred CEEEEeCCCCC---CcCCCCC---CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccc
Confidence 34444444333 4554332 345555555555555543 34555555555555555433 23445555555555
Q ss_pred eec-CCCcccc-hhhcCCCCCCEEeccCC
Q 002432 308 LIE-SDIVEFP-EELGKLTKLRLLDLTNC 334 (922)
Q Consensus 308 L~~-~~l~~lp-~~i~~L~~L~~L~l~~~ 334 (922)
+.. +++..++ ..+.++++|++|++.+|
T Consensus 85 ~~~~n~l~~~~~~~~~~l~~L~~l~l~~~ 113 (242)
T d1xwdc1 85 IEKANNLLYINPEAFQNLPNLQYLLISNT 113 (242)
T ss_dssp EECCTTCCEECTTSEECCTTCCEEEEESC
T ss_pred ccccccccccccccccccccccccccchh
Confidence 443 2343332 23455555555555554
No 29
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=4.5e-13 Score=137.53 Aligned_cols=67 Identities=19% Similarity=0.289 Sum_probs=32.9
Q ss_pred cCCCcceeeecccceeeeccCCCcccccCccEEEeccCcCccccccHHHHhhhccccEEEEecccccc
Q 002432 651 VLPNLEALELCEINVKSIWHNQTPCCFQRLTRLIVWGCQKLKFMFYASMIKSLEQLQHLEIRNCTGLQ 718 (922)
Q Consensus 651 ~l~~L~~L~l~~~~l~~~~~~~~~~~l~~L~~L~l~~C~~L~~l~~~~~~~~l~~L~~L~l~~c~~l~ 718 (922)
.+++|++|++++|.+.+.....+ ..+++|++|++++|..+++......+.++++|++|+|++|.++.
T Consensus 69 ~c~~L~~L~L~~~~l~~~~~~~l-~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~ 135 (284)
T d2astb2 69 QCSKLQNLSLEGLRLSDPIVNTL-AKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 135 (284)
T ss_dssp TBCCCSEEECTTCBCCHHHHHHH-TTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred hCCCcccccccccCCCcHHHHHH-hcCCCCcCccccccccccccccchhhHHHHhccccccccccccc
Confidence 34555555555554332211111 12456666666666655542222234455666666666665543
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.16 E-value=6.6e-13 Score=127.57 Aligned_cols=113 Identities=19% Similarity=0.270 Sum_probs=84.7
Q ss_pred CCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCC-ccccCCCCcCCEEEeecCCCcccchhhcCCC
Q 002432 246 NIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGD-ITIIGKLKNLEILSLIESDIVEFPEELGKLT 324 (922)
Q Consensus 246 ~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~-p~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~ 324 (922)
.++.+ +..+++|++|+|++|.|+.++ .+..+++|++|++++|.+.. +..+..+.+|++|++++|+++.++ .+.+++
T Consensus 39 ~l~~s-l~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~ 115 (198)
T d1m9la_ 39 KMDAT-LSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLV 115 (198)
T ss_dssp CCHHH-HHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHH
T ss_pred hhhhH-HhcccccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccccccccc-cccccc
Confidence 34444 477888888888888888775 47888888888888888777 544455667888888888888764 477788
Q ss_pred CCCEEeccCCCCCCccCc-chhCCCCCCCEEEccCCccc
Q 002432 325 KLRLLDLTNCFHLKVIAP-NVIASFTRLEELYMSNCFVE 362 (922)
Q Consensus 325 ~L~~L~l~~~~~l~~~p~-~~l~~L~~L~~L~L~~~~~~ 362 (922)
+|++|++++|. ++.++. ..++.+++|+.|++++|.+.
T Consensus 116 ~L~~L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 116 NLRVLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HSSEEEESEEE-CCCHHHHHHHTTTTTCSEEEECSSHHH
T ss_pred cccccccccch-hccccccccccCCCccceeecCCCccc
Confidence 88888888875 666653 33778888888888888765
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.12 E-value=6e-13 Score=127.87 Aligned_cols=141 Identities=21% Similarity=0.269 Sum_probs=110.9
Q ss_pred ceEEEeecC--CCCCCCCCC-CCCCccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCccCchhhhccCCCCEEE
Q 002432 209 CYAISWIDS--SGGELPEGL-ECPQLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLFSLPSSIDLLVNLQTLC 285 (922)
Q Consensus 209 l~~L~l~~~--~~~~l~~~~-~~~~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~ 285 (922)
.+.+++.+. .+..++..+ .+++|+.|++++|.+. .++. |..+++|++|++++|.++.+|..+..+.+|++|+
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~---~i~~--l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~ 99 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE---KISS--LSGMENLRILSLGRNLIKKIENLDAVADTLEELW 99 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEES---CCCC--HHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEE
T ss_pred cceeeeecccCchhhhhhHHhcccccceeECcccCCC---Cccc--ccCCccccChhhcccccccccccccccccccccc
Confidence 344555443 233343333 7899999999999876 6653 5889999999999999999988777778999999
Q ss_pred ccCCCCCCccccCCCCcCCEEEeecCCCcccc--hhhcCCCCCCEEeccCCCCCCccCcc----------hhCCCCCCCE
Q 002432 286 LDYSTLGDITIIGKLKNLEILSLIESDIVEFP--EELGKLTKLRLLDLTNCFHLKVIAPN----------VIASFTRLEE 353 (922)
Q Consensus 286 L~~~~l~~p~~i~~L~~L~~L~L~~~~l~~lp--~~i~~L~~L~~L~l~~~~~l~~~p~~----------~l~~L~~L~~ 353 (922)
+++|.++.++.+..+++|++|++++|+++.++ ..+..+++|++|++++|. +...+.. .+.++++|+.
T Consensus 100 l~~N~i~~l~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~r~~vi~~lp~L~~ 178 (198)
T d1m9la_ 100 ISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP-LYNDYKENNATSEYRIEVVKRLPNLKK 178 (198)
T ss_dssp CSEEECCCHHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSH-HHHHHCTTTTHHHHHHHHHHHCSSCCE
T ss_pred cccccccccccccccccccccccccchhccccccccccCCCccceeecCCCc-cccCcccccchhhHHHHHHHHCCCcCE
Confidence 99999999767889999999999999999876 368999999999999985 4333221 2566888888
Q ss_pred EE
Q 002432 354 LY 355 (922)
Q Consensus 354 L~ 355 (922)
||
T Consensus 179 LD 180 (198)
T d1m9la_ 179 LD 180 (198)
T ss_dssp ES
T ss_pred eC
Confidence 86
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=3.7e-09 Score=96.44 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=72.4
Q ss_pred CcEEEeeCCcCccCchhhhccCCCCEEEccCCC-CCC--ccccCCCCcCCEEEeecCCCcccc-hhhcCCCCCCEEeccC
Q 002432 258 LKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYST-LGD--ITIIGKLKNLEILSLIESDIVEFP-EELGKLTKLRLLDLTN 333 (922)
Q Consensus 258 Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~-l~~--p~~i~~L~~L~~L~L~~~~l~~lp-~~i~~L~~L~~L~l~~ 333 (922)
...++.+++.+.+.|..+..+++|+.|++.+++ ++. +..|.++++|+.|++++|+++.++ ..|..+++|++|++++
T Consensus 10 ~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 10 SSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 345677777777777777777777777776654 665 366777778888888877777774 4477778888888877
Q ss_pred CCCCCccCcchhCCCCCCCEEEccCCccc
Q 002432 334 CFHLKVIAPNVIASFTRLEELYMSNCFVE 362 (922)
Q Consensus 334 ~~~l~~~p~~~l~~L~~L~~L~L~~~~~~ 362 (922)
|. ++.+|.+.+.. .+|++|+|++|.+.
T Consensus 90 N~-l~~l~~~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 90 NA-LESLSWKTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp SC-CSCCCSTTTCS-CCCCEEECCSSCCC
T ss_pred CC-CcccChhhhcc-ccccccccCCCccc
Confidence 75 77777764433 36777777777653
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88 E-value=3.9e-11 Score=132.97 Aligned_cols=104 Identities=21% Similarity=0.256 Sum_probs=62.2
Q ss_pred CccEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCCcCc-----cCchhhhccCCCCEEEccCCCCCC--c----cccC
Q 002432 230 QLELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNMQLF-----SLPSSIDLLVNLQTLCLDYSTLGD--I----TIIG 298 (922)
Q Consensus 230 ~Lr~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~~i~-----~lp~~i~~L~~L~~L~L~~~~l~~--p----~~i~ 298 (922)
+|++|+++++.... .--..++..++++|+|+|++|+++ .+...+..+++|++|+|++|.|.. . ..+.
T Consensus 3 ~l~~ld~~~~~i~~--~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 3 DIQSLDIQCEELSD--ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEESCCCCH--HHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CCCEEEeeCCcCCh--HHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHh
Confidence 46667776665431 111233466777777777777665 234556677777777777777643 1 1221
Q ss_pred -CCCcCCEEEeecCCCcc-----cchhhcCCCCCCEEeccCCC
Q 002432 299 -KLKNLEILSLIESDIVE-----FPEELGKLTKLRLLDLTNCF 335 (922)
Q Consensus 299 -~L~~L~~L~L~~~~l~~-----lp~~i~~L~~L~~L~l~~~~ 335 (922)
...+|++|++++|+++. ++..+..+++|++|++++|.
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred cCCCCCCEEECCCCCccccccccccchhhcccccccccccccc
Confidence 23467777777776652 34456667777777777764
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=4.1e-09 Score=96.12 Aligned_cols=100 Identities=17% Similarity=0.066 Sum_probs=62.2
Q ss_pred cEEEccCCCCcCCCCCChHHhhCCCCCcEEEeeCC-cCccCc-hhhhccCCCCEEEccCCCCCC--ccccCCCCcCCEEE
Q 002432 232 ELLLLSSEHSSVDVNIPQRFFTGMRELKVVDLTNM-QLFSLP-SSIDLLVNLQTLCLDYSTLGD--ITIIGKLKNLEILS 307 (922)
Q Consensus 232 r~L~l~~~~~~~~~~l~~~~~~~l~~Lr~L~L~~~-~i~~lp-~~i~~L~~L~~L~L~~~~l~~--p~~i~~L~~L~~L~ 307 (922)
..+++.++... .+|..+ ..+++|+.|+++++ .++.++ ..|.++++|++|++++|+|+. +..|..+++|++|+
T Consensus 11 ~~l~c~~~~~~---~~p~~l-~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 11 SGLRCTRDGAL---DSLHHL-PGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SCEECCSSCCC---TTTTTS-CSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CeEEecCCCCc---cCcccc-cCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 34444444333 444443 55666777777554 366664 356667777777777777665 45567777777777
Q ss_pred eecCCCcccchhhcCCCCCCEEeccCCC
Q 002432 308 LIESDIVEFPEELGKLTKLRLLDLTNCF 335 (922)
Q Consensus 308 L~~~~l~~lp~~i~~L~~L~~L~l~~~~ 335 (922)
|++|+++.+|.++....+|++|++++|.
T Consensus 87 Ls~N~l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 87 LSFNALESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp CCSSCCSCCCSTTTCSCCCCEEECCSSC
T ss_pred ccCCCCcccChhhhccccccccccCCCc
Confidence 7777777776665444567777777764
No 35
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72 E-value=2e-10 Score=127.03 Aligned_cols=105 Identities=21% Similarity=0.308 Sum_probs=78.0
Q ss_pred CCcEEEeeCCcCcc--CchhhhccCCCCEEEccCCCCCC--c----cccCCCCcCCEEEeecCCCcc-----cchhhc-C
Q 002432 257 ELKVVDLTNMQLFS--LPSSIDLLVNLQTLCLDYSTLGD--I----TIIGKLKNLEILSLIESDIVE-----FPEELG-K 322 (922)
Q Consensus 257 ~Lr~L~L~~~~i~~--lp~~i~~L~~L~~L~L~~~~l~~--p----~~i~~L~~L~~L~L~~~~l~~-----lp~~i~-~ 322 (922)
+|++||+++++++. +.+-+..++++++|+|++|.++. . ..+..+++|++|||++|+++. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 58899999999984 34557788999999999999874 2 456788999999999998862 222232 2
Q ss_pred CCCCCEEeccCCCCCCccC----cchhCCCCCCCEEEccCCccc
Q 002432 323 LTKLRLLDLTNCFHLKVIA----PNVIASFTRLEELYMSNCFVE 362 (922)
Q Consensus 323 L~~L~~L~l~~~~~l~~~p----~~~l~~L~~L~~L~L~~~~~~ 362 (922)
..+|++|++++|. ++... ...+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCC-ccccccccccchhhccccccccccccccch
Confidence 3579999999885 65432 123677889999999888765
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.51 E-value=1.2e-08 Score=107.47 Aligned_cols=135 Identities=16% Similarity=0.080 Sum_probs=64.9
Q ss_pred hCCCCCcEEEeeCCcCcc-----CchhhhccCCCCEEEccCCCCCC--ccc-------------cCCCCcCCEEEeecCC
Q 002432 253 TGMRELKVVDLTNMQLFS-----LPSSIDLLVNLQTLCLDYSTLGD--ITI-------------IGKLKNLEILSLIESD 312 (922)
Q Consensus 253 ~~l~~Lr~L~L~~~~i~~-----lp~~i~~L~~L~~L~L~~~~l~~--p~~-------------i~~L~~L~~L~L~~~~ 312 (922)
...++|+.|++++|.+.. +...+...++|++|++++|.+.. ... ....+.|+.|++++|.
T Consensus 90 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~ 169 (344)
T d2ca6a1 90 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 169 (344)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccc
Confidence 445566666666665542 33344455666666666665432 100 1234456666666554
Q ss_pred Cc-----ccchhhcCCCCCCEEeccCCCCCCcc-----CcchhCCCCCCCEEEccCCcccccccccCCcccccccCcccC
Q 002432 313 IV-----EFPEELGKLTKLRLLDLTNCFHLKVI-----APNVIASFTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDEL 382 (922)
Q Consensus 313 l~-----~lp~~i~~L~~L~~L~l~~~~~l~~~-----p~~~l~~L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l 382 (922)
++ .+...+.....|++|++++|. +..- ....+...++|++|++++|.+.. .........+
T Consensus 170 i~~~~~~~l~~~l~~~~~L~~L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~---------~g~~~L~~~l 239 (344)
T d2ca6a1 170 LENGSMKEWAKTFQSHRLLHTVKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH---------LGSSALAIAL 239 (344)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCSSCCHH---------HHHHHHHHHG
T ss_pred ccccccccccchhhhhhhhccccccccc-ccccccccchhhhhcchhhhcccccccccccc---------cccccccccc
Confidence 43 223334555566666666553 3321 11124455566666666555431 0001122334
Q ss_pred CCCCCCCEEEeeecC
Q 002432 383 MPLPRLTTLEIAVEN 397 (922)
Q Consensus 383 ~~l~~L~~L~l~~~~ 397 (922)
...++|++|++++|.
T Consensus 240 ~~~~~L~~L~Ls~n~ 254 (344)
T d2ca6a1 240 KSWPNLRELGLNDCL 254 (344)
T ss_dssp GGCTTCCEEECTTCC
T ss_pred cccccchhhhhhcCc
Confidence 455556666665554
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.37 E-value=7.1e-08 Score=101.40 Aligned_cols=184 Identities=17% Similarity=0.177 Sum_probs=116.5
Q ss_pred CcceEEEeecCCCCCCC-----CCC-CCCCccEEEccCCCCcCCC--CCC--------hHHhhCCCCCcEEEeeCCcCc-
Q 002432 207 KKCYAISWIDSSGGELP-----EGL-ECPQLELLLLSSEHSSVDV--NIP--------QRFFTGMRELKVVDLTNMQLF- 269 (922)
Q Consensus 207 ~~l~~L~l~~~~~~~l~-----~~~-~~~~Lr~L~l~~~~~~~~~--~l~--------~~~~~~l~~Lr~L~L~~~~i~- 269 (922)
++++.|++.+|.+.... ... ..++|+.|++++|.....+ .+. .......+.|++++++++.+.
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc
Confidence 46788888888764321 111 5678888888887542100 000 001245678888888888765
Q ss_pred ----cCchhhhccCCCCEEEccCCCCCC--c-----cccCCCCcCCEEEeecCCCc-----ccchhhcCCCCCCEEeccC
Q 002432 270 ----SLPSSIDLLVNLQTLCLDYSTLGD--I-----TIIGKLKNLEILSLIESDIV-----EFPEELGKLTKLRLLDLTN 333 (922)
Q Consensus 270 ----~lp~~i~~L~~L~~L~L~~~~l~~--p-----~~i~~L~~L~~L~L~~~~l~-----~lp~~i~~L~~L~~L~l~~ 333 (922)
.+...+....+|++|++++|.+.. . ..+..+++|++|++++|.++ .+...+...++|++|++++
T Consensus 173 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~ 252 (344)
T d2ca6a1 173 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 252 (344)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred cccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence 244456677888888888888764 1 34667888888888888775 2455677888888888888
Q ss_pred CCCCCccCcch----hCC--CCCCCEEEccCCcccccccccCCcccccccCcccCC-CCCCCCEEEeeecCCCC
Q 002432 334 CFHLKVIAPNV----IAS--FTRLEELYMSNCFVEWKVEDEGSSSKKSKASLDELM-PLPRLTTLEIAVENDNA 400 (922)
Q Consensus 334 ~~~l~~~p~~~----l~~--L~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~L~~L~l~~~~~~~ 400 (922)
|. ++...... +.. -+.|++|++++|.+... ........+. +.++|+.|++++|....
T Consensus 253 n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~---------~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 253 CL-LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELD---------AVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHH---------HHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred Cc-cCchhhHHHHHHhhhccCCCCCEEECCCCcCChH---------HHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 85 55422111 222 35688888888876520 0011223332 46678888888877543
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.86 E-value=4.6e-07 Score=82.80 Aligned_cols=42 Identities=29% Similarity=0.336 Sum_probs=21.2
Q ss_pred hhCCCCCcEEEeeCCcCccCc---hhhhccCCCCEEEccCCCCCC
Q 002432 252 FTGMRELKVVDLTNMQLFSLP---SSIDLLVNLQTLCLDYSTLGD 293 (922)
Q Consensus 252 ~~~l~~Lr~L~L~~~~i~~lp---~~i~~L~~L~~L~L~~~~l~~ 293 (922)
+.++++|++|+|++|.|+.++ ..+..+++|++|++++|.|+.
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~ 105 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 105 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc
Confidence 344555555555555555432 234445555555555555544
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.54 E-value=9.4e-06 Score=73.78 Aligned_cols=100 Identities=23% Similarity=0.143 Sum_probs=71.1
Q ss_pred CCCCcEEEeeCCcCccCchhhhccCCCCEEEccCCCCCCc----cccCCCCcCCEEEeecCCCcccch-hhcCCCCCCEE
Q 002432 255 MRELKVVDLTNMQLFSLPSSIDLLVNLQTLCLDYSTLGDI----TIIGKLKNLEILSLIESDIVEFPE-ELGKLTKLRLL 329 (922)
Q Consensus 255 l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~l~~p----~~i~~L~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L 329 (922)
+..++.++...+.+..++....++++|++|+|++|+|+.. ..+..+++|++|++++|.++.++. ...+..+|+.|
T Consensus 41 ~~~~~~l~~~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L 120 (162)
T d1koha1 41 QNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEEL 120 (162)
T ss_dssp TTCCCCTTSHHHHHHHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSC
T ss_pred ccchhhcchhhhHhhhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhcccccee
Confidence 3334444444444444455556789999999999998862 446789999999999999998865 23445679999
Q ss_pred eccCCCCCCccCc-------chhCCCCCCCEEE
Q 002432 330 DLTNCFHLKVIAP-------NVIASFTRLEELY 355 (922)
Q Consensus 330 ~l~~~~~l~~~p~-------~~l~~L~~L~~L~ 355 (922)
++++|. +..... ..+..+++|+.||
T Consensus 121 ~L~~Np-l~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 121 WLDGNS-LSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp CCTTST-TSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred ecCCCC-cCcCcccchhHHHHHHHHCCCCCEEC
Confidence 999986 543322 2356789999987
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.74 E-value=0.0017 Score=58.56 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=27.8
Q ss_pred hhccCCCCEEEccCCCCCC--c----cccCCCCcCCEEEeecCCCcc-----cchhhcCCCCCCEEeccCC
Q 002432 275 IDLLVNLQTLCLDYSTLGD--I----TIIGKLKNLEILSLIESDIVE-----FPEELGKLTKLRLLDLTNC 334 (922)
Q Consensus 275 i~~L~~L~~L~L~~~~l~~--p----~~i~~L~~L~~L~L~~~~l~~-----lp~~i~~L~~L~~L~l~~~ 334 (922)
+...++|++|+|++|.+.. . ..+...+.|++|++++|.++. +-..+..-+.|++|++++|
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCC
Confidence 3344445555555554432 1 223334455555555554441 2233444455555555554
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.74 E-value=0.00083 Score=60.71 Aligned_cols=81 Identities=10% Similarity=0.053 Sum_probs=42.9
Q ss_pred hCCCCCcEEEeeCCcCc-----cCchhhhccCCCCEEEccCCCCCC--c----cccCCCCcCCEEEeecCCCcc------
Q 002432 253 TGMRELKVVDLTNMQLF-----SLPSSIDLLVNLQTLCLDYSTLGD--I----TIIGKLKNLEILSLIESDIVE------ 315 (922)
Q Consensus 253 ~~l~~Lr~L~L~~~~i~-----~lp~~i~~L~~L~~L~L~~~~l~~--p----~~i~~L~~L~~L~L~~~~l~~------ 315 (922)
...+.|+.|++++|.+. .+...+...+.|++|++++|.+.. . ..+..-+.|++|+++++.+..
T Consensus 41 ~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~ 120 (167)
T d1pgva_ 41 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 120 (167)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHH
Confidence 44556666666666554 123344455666666666666553 1 345555666666666554332
Q ss_pred --cchhhcCCCCCCEEeccC
Q 002432 316 --FPEELGKLTKLRLLDLTN 333 (922)
Q Consensus 316 --lp~~i~~L~~L~~L~l~~ 333 (922)
+...+..-+.|+.|+++.
T Consensus 121 ~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 121 MDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp HHHHHHHHHCSSCCEEECCC
T ss_pred HHHHHHHHhCCCccEeeCcC
Confidence 222333445555555543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.14 E-value=0.0025 Score=57.43 Aligned_cols=80 Identities=16% Similarity=0.178 Sum_probs=40.5
Q ss_pred hCCCCCcEEEeeCC-cCc-----cCchhhhccCCCCEEEccCCCCCC--c----cccCCCCcCCEEEeecCCCc-----c
Q 002432 253 TGMRELKVVDLTNM-QLF-----SLPSSIDLLVNLQTLCLDYSTLGD--I----TIIGKLKNLEILSLIESDIV-----E 315 (922)
Q Consensus 253 ~~l~~Lr~L~L~~~-~i~-----~lp~~i~~L~~L~~L~L~~~~l~~--p----~~i~~L~~L~~L~L~~~~l~-----~ 315 (922)
.+.+.|+.|+++++ .++ .+-..+...++|+.|++++|.+.. . ..+...++++.++++++.+. .
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 44556666666552 333 122334455566666666665543 1 23444556666666655443 2
Q ss_pred cchhhcCCCCCCEEecc
Q 002432 316 FPEELGKLTKLRLLDLT 332 (922)
Q Consensus 316 lp~~i~~L~~L~~L~l~ 332 (922)
+-..+...++|+.+++.
T Consensus 94 l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 94 LVEALQSNTSLIELRID 110 (166)
T ss_dssp HHHGGGGCSSCCEEECC
T ss_pred HHHHHHhCccccEEeec
Confidence 23344555556555443
No 43
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.19 E-value=0.008 Score=53.89 Aligned_cols=108 Identities=16% Similarity=0.114 Sum_probs=73.4
Q ss_pred CCCCccEEEccCCC-CcCCC-CCChHHhhCCCCCcEEEeeCCcCc-----cCchhhhccCCCCEEEccCCCCCC--c---
Q 002432 227 ECPQLELLLLSSEH-SSVDV-NIPQRFFTGMRELKVVDLTNMQLF-----SLPSSIDLLVNLQTLCLDYSTLGD--I--- 294 (922)
Q Consensus 227 ~~~~Lr~L~l~~~~-~~~~~-~l~~~~~~~l~~Lr~L~L~~~~i~-----~lp~~i~~L~~L~~L~L~~~~l~~--p--- 294 (922)
..+.|+.|++++.. +...+ .--...+...++|+.|++++|.+. .+-..+...+.++.+++++|.+.. .
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 34677888887632 21100 001122357889999999999876 244466778899999999999865 1
Q ss_pred -cccCCCCcCCEEEee--cCCCc-----ccchhhcCCCCCCEEeccCC
Q 002432 295 -TIIGKLKNLEILSLI--ESDIV-----EFPEELGKLTKLRLLDLTNC 334 (922)
Q Consensus 295 -~~i~~L~~L~~L~L~--~~~l~-----~lp~~i~~L~~L~~L~l~~~ 334 (922)
..+...++|+.++|. +|.+. .+...+.+.++|++|++..+
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 667788999886665 45554 34556677888888888664
No 44
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=65.14 E-value=3.1 Score=39.29 Aligned_cols=58 Identities=12% Similarity=0.168 Sum_probs=43.2
Q ss_pred ceEeCCCCCHHHHHHHHHHHhCC-CCCChhhHHHHHHHHHHhCCCcchHHHHHHHhhcCCCHH
Q 002432 5 ANFSIEILNEEEAWRLFEVKLGN-DDLIPRMKSTATHIVKECGGLPIAIEPIAKALRNKTESE 66 (922)
Q Consensus 5 ~~~~l~~L~~~~~~~Lf~~~~~~-~~~~~~~~~~~~~i~~~c~glPlai~~~g~~L~~~~~~~ 66 (922)
..+.+++++.+|+.+++.+.+.. ....++ ..+|.++++|.|.++..+|..+....+.+
T Consensus 201 ~~i~L~~l~~~e~~~~l~~~~~~~~~~~~~----~~~i~~~~~G~P~~L~~~~~~~~~~~~~~ 259 (283)
T d2fnaa2 201 STVELKPFSREEAIEFLRRGFQEADIDFKD----YEVVYEKIGGIPGWLTYFGFIYLDNKNLD 259 (283)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHTCCCCC----HHHHHHHHCSCHHHHHHHHHHHHHHCCHH
T ss_pred eEEeeCCCCHHHHHHHHHhhhhhcCCCHHH----HHHHHHHhCCCHHHHHHHHHHHHhcccHH
Confidence 56789999999999999887721 111222 46899999999999999988776543443
Done!