BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002436
(921 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/815 (45%), Positives = 502/815 (61%), Gaps = 18/815 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK ++ + + + ++ NF G PG
Sbjct: 54 LGRSVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPG 113
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L+ + + + G + F N+WI++ K RI F NQ YLPS+TP
Sbjct: 114 AFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETP 173
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L ++RG+G GERK ERIYDY VYNDLG+PDK ++ ARPVL G + PYP
Sbjct: 174 APLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYP 233
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXX 351
RR RTGR PT+ DP ESR + VY+PRDE F +K + F + LK+V N
Sbjct: 234 RRGRTGRKPTRKDPNSESR---SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQS 290
Query: 352 XXXXXXX--XFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVGDRLFKYE 408
F F ++ LY+ G L D SK+ V+K+ F G++ K+
Sbjct: 291 AFDLNFTPREFDSFDEVHGLYSGGIKLPTDI----ISKISPLPVLKEIFRTDGEQALKFP 346
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P VI+ + AW+ D EFAR+ LAGVNP I LK+FP SKLD +YG S ITKE +
Sbjct: 347 PPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHL 406
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
E L GL+V++AI+ KRLF+LD+HD ++P++ +IN+ K YA+RT+ F G LRPL
Sbjct: 407 EPNLEGLTVDEAIQNKRLFLLDHHDPIMPYLRRINAT-STKAYATRTILFLKNDGTLRPL 465
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP + S ++ + IW LAKA+V ND+ HQLV+HWL THA
Sbjct: 466 AIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAV 525
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
+EP+IIAT+R LS +HPIYKLLHPH R T+ IN LAR SL+N GG+IE +F GRY++E+
Sbjct: 526 VEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEM 585
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
S+ YK W F +ALPADL++RGMA EDPS P G+RLVIEDYPY DGL IW AIK WV
Sbjct: 586 SAVVYKD-WVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWV 644
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
YV +Y +++ D ELQA W E+ GH DK+NE WWPK++T+E+L I+IWT
Sbjct: 645 HEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWT 704
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPTL R+ +P++ YE+ NPQ +L ++ + Q
Sbjct: 705 ASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTL 764
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LS H+ DE YLG+ + + +W +D L F +F L +IE ++ RN D
Sbjct: 765 IDLSVIEILSRHASDEVYLGERD--NPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDE 822
Query: 887 RLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
+L+ RCG PY LLLPSS G+T RGIPNSISI
Sbjct: 823 KLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/815 (45%), Positives = 500/815 (61%), Gaps = 18/815 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK ++ + + + ++ NF G PG
Sbjct: 54 LGRSVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPG 113
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L+ + + + G + F N+WI++ K RI F NQ YLPS+TP
Sbjct: 114 AFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETP 173
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L ++RG+G GERK ERIYDY VYNDLG+PDK ++ ARPVL G + PYP
Sbjct: 174 APLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYP 233
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNXXXXXXX 351
RR RTGR PT+ DP ESR + VY+PRDE F +K + F + LK+V N
Sbjct: 234 RRGRTGRKPTRKDPNSESR---SNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQS 290
Query: 352 XXXXXXX--XFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVGDRLFKYE 408
F F ++ LY+ G L D SK+ V+K+ F G++ K+
Sbjct: 291 AFDLNFTPREFDSFDEVHGLYSGGIKLPTDI----ISKISPLPVLKEIFRTDGEQALKFP 346
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P VI+ + AW+ D EFAR+ LAGVNP I LK+FP SKLD +YG S ITKE +
Sbjct: 347 PPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHL 406
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
E L GL+V++AI+ KRLF+LD+HD ++P++ +IN+ K YA+RT+ F G LRPL
Sbjct: 407 EPNLEGLTVDEAIQNKRLFLLDHHDPIMPYLRRINAT-STKAYATRTILFLKNDGTLRPL 465
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP + S ++ + IW LAKA+V ND+ HQLV+H L THA
Sbjct: 466 AIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHXLNTHAV 525
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
+EP+IIAT+R LS +HPIYKLLHPH R T+ IN LAR S +N GG+IE +F GRY++E+
Sbjct: 526 VEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSXVNDGGVIEQTFLWGRYSVEM 585
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
S+ YK W F +ALPADL++RGMA EDPS P G+RLVIEDYPY DGL IW AIK WV
Sbjct: 586 SAVVYKD-WVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYTVDGLEIWDAIKTWV 644
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
YV +Y +++ D ELQA W E+ GH DK+NE WWPK++T+E+L I+IWT
Sbjct: 645 HEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWT 704
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPTL R+ +P++ YE+ NPQ +L ++ + Q
Sbjct: 705 ASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTL 764
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LS H+ DE YLG+ + + +W +D L F +F L +IE ++ RN D
Sbjct: 765 IDLSVIEILSRHASDEVYLGERD--NPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDE 822
Query: 887 RLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
+L+ RCG PY LLLPSS G+T RGIPNSISI
Sbjct: 823 KLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/818 (44%), Positives = 496/818 (60%), Gaps = 20/818 (2%)
Query: 111 VNGIGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFG 170
V + I IQLIS + +RG + P + Y+A F SDFG
Sbjct: 49 VTFLASSISIQLISATKADGGKGKVGKATNLRGKITLPTIGAKEE--AYDAQFDWDSDFG 106
Query: 171 NPGAILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPS 229
PGA I N EFYL +++ + G + F N+W+++ K RI F N YLPS
Sbjct: 107 IPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPS 166
Query: 230 QTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERP 289
+TPA + R E+L ++RG+G GERK +RIYDY VYNDLG+PDK + ARPVL G P
Sbjct: 167 ETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGSALP 226
Query: 290 YPRRCRTGRPPTKTDPLCESRIEKPHP-VYVPRDETFEEIKQNTFSSGRLKAVLHNX--X 346
YPRR RTGR T+ DP EKP VY+PRDE F +K + F + +K+V +
Sbjct: 227 YPRRGRTGRGKTRKDP----NSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPV 282
Query: 347 XXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVGDRLF 405
F F+++ KLY G L N S + +IK+ F G++
Sbjct: 283 LTDAFDGNLLSLDFDNFAEVRKLYEGGVTLP----TNFLSNITPIPIIKELFRTDGEQFL 338
Query: 406 KYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITK 465
KY P V++ D+ AW+ D EFAR+T+AG+NP I+ ++EFP+ SKLD YG ITK
Sbjct: 339 KYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITK 398
Query: 466 ELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGML 525
E +E L GL+VE+AI+ K+LFILD+HD L+P++ KIN+ KTYA+RT+FF G L
Sbjct: 399 EHLEPNLGGLTVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTL 457
Query: 526 RPLAIELSLPPSRSSPQN--KHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMT 583
PLAIELS P + +Y + +IW LAKA+V NDA HQ+++HWL T
Sbjct: 458 TPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNT 517
Query: 584 HASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA 643
HA +EP++IAT+R LS +HPIYKLL PH R T+ IN+LAR+SL+N GIIE +F GRY+
Sbjct: 518 HAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYS 577
Query: 644 MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 703
+E+S+ YK W F +ALP DL++RG+A +DPS P GVRL+IEDYPYA+DGL IW AIK
Sbjct: 578 LEMSAVIYKD-WVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIK 636
Query: 704 EWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIM 763
WVE YV+ +Y + D ELQAWW E+ GH D +++ WW K++T+E+L +
Sbjct: 637 SWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATL 696
Query: 764 IWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQL 823
IW AS HAA+NFGQYP+GG + NRPT+ R+ +P++ P Y+ NP+ FL ++ +
Sbjct: 697 IWIASALHAAVNFGQYPYGGLILNRPTISRRFMPEKGSPEYDALAKNPEKEFLKTITGKK 756
Query: 824 QATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRN 883
+ + + + LS H+ DE YLGQ + +W +D L F +F NLEEIEK + +N
Sbjct: 757 ETLIDLTIIEILSRHASDEFYLGQRDG-GDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKN 815
Query: 884 KDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
D L+ R G PY LL PSS G+T RGIPNSISI
Sbjct: 816 NDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/816 (44%), Positives = 494/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 494/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI+E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIVETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/816 (44%), Positives = 493/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 494/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI+E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGILETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 493/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFG+YP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGEYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 493/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ H+L++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHELMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 493/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 493/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA++FGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVHFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 492/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFG YP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGNYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 492/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ H L++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHALMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 493/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GI E +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIGETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+NFGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/816 (44%), Positives = 492/816 (60%), Gaps = 20/816 (2%)
Query: 114 IGQGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPG 173
+G+ + +QLIS GK + + + + + +F G PG
Sbjct: 36 LGRSVSLQLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 174 AILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTP 232
A I N EF+L + + + G + F N+W+++ K RI F N Y+PS+TP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 233 AGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEER-PYP 291
A + R E+L S+RGNG GERK ++RIYDY VYNDLGNPDK + LARPVL G PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 292 RRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAV--LHNXXXXX 349
RR RTGR PT TDP E + E YVPRDE +K K++ +
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGEV---FYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFES 272
Query: 350 XXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQFLNV-GDRLFKYE 408
F F D+ LY G L D S + VIK+ G + K+
Sbjct: 273 AFDLKSTPIEFHSFQDVHDLYEGGIKLPRD----VISTIIPLPVIKELYRTDGQHILKFP 328
Query: 409 TPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468
P V++ + AW+ D EFAR+ +AGVNP I L+EFP S LDPAIYG S IT + +
Sbjct: 329 QPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSL 388
Query: 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPL 528
+ L G ++++A+ +RLF+LDYHD+ +P++ +IN L KTYA+RT+ F + G L+P+
Sbjct: 389 D--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPV 446
Query: 529 AIELSLPPSRS--SPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHAS 586
AIELSLP S S + + IW LAKA+V ND+ HQL++HWL THA+
Sbjct: 447 AIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAA 506
Query: 587 MEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMEL 646
MEP++IATHR LS +HPIYKLL PH R + INALARQSLIN GIIE +F P +Y++E+
Sbjct: 507 MEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEM 566
Query: 647 SSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWV 706
SSA YK+ W F +ALPADL++RG+A +DPS P GVRL+IEDYPYAADGL IW AIK WV
Sbjct: 567 SSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWV 625
Query: 707 ESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWT 766
+ YV +Y+ + V +D ELQ WW E KGH D +++ WWPKL+T EDL + I+IW
Sbjct: 626 QEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWI 685
Query: 767 ASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQAT 826
AS HAA+ FGQYP+GG + NRPT R+L+P++ P YE+ + N + +L ++ ++L
Sbjct: 686 ASALHAAVGFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTL 745
Query: 827 KVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDF 886
++V + LSTH+ DE YLGQ + + HW +D + L F KF L+EIE+ + RN D
Sbjct: 746 ISLSVIEILSTHASDEVYLGQRD--NPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDP 803
Query: 887 RLKG-RCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
L+G R G PY LL PSS G+T RGIPNSISI
Sbjct: 804 SLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/825 (44%), Positives = 498/825 (60%), Gaps = 39/825 (4%)
Query: 114 IGQGIMIQLISEDIDPVTNSGK-SVESAVRGWLPK-PVTSSNVN----IFQYEANFGVPS 167
+G+ I +QLIS + +GK E + LP P + + F+++A+FG+P
Sbjct: 62 LGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIP- 120
Query: 168 DFGNPGAILITNLHGKEFYLLEIVVHGF-DGGPVFFPANTWIHSRKDNAESRIIFKNQAY 226
GA I N EF+L+ + + + G + F N+W+++ + ++RI F N Y
Sbjct: 121 -----GAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTY 175
Query: 227 LPSQTPAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGE 286
LPS TPA + R+E+ +RG+G G+RK +RIYDY VYNDLGNPD RP+L G
Sbjct: 176 LPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRPILGGC 233
Query: 287 E-RPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNX 345
PYP R RTGR T+TDP EKP VYVPRDE F +K + F + +K++ H+
Sbjct: 234 SIYPYPLRVRTGRERTRTDP----NSEKPGEVYVPRDENFGHLKSSDFLTYGIKSLSHDV 289
Query: 346 X---XXXXXXXXXXXXXFTCFSDIDKLYNSGFLLKDDDEQNGRSKLFLATVIKQ-FLNVG 401
F F D+ LY G L D S++ +K+ F G
Sbjct: 290 IPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDI----LSQISPLPALKEIFRTDG 345
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+ + ++ P V + + + D EFAR+ +AGVNP I L+EFP S LDP +YG S
Sbjct: 346 ENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTS 405
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNK 521
ITKE +E + G++VE+A+ +RLFILDY D +P++ +INSLP K YA+RT+ F
Sbjct: 406 TITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKD 465
Query: 522 AGMLRPLAIELSLP-PSRSSPQNKHIY----THGHDATTHWIWKLAKAHVCSNDAGVHQL 576
G L+PLAIELS P P + + I T G D+T IW LAKAHV ND+G HQL
Sbjct: 466 DGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDST---IWLLAKAHVIVNDSGYHQL 522
Query: 577 VNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEAS 636
V+HWL THA MEP+ IAT+R LS +HPIYKLL+PH R T+ IN LARQSLIN GIIE S
Sbjct: 523 VSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKS 582
Query: 637 FSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGL 696
F PG+Y++E+SS+ YK+ W F +ALPADL++RG+A EDPS P G+RLVIEDYPYA DGL
Sbjct: 583 FLPGKYSIEMSSSVYKN-WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGL 641
Query: 697 LIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDL 756
IW AIK WV YV+ +Y +V D ELQAWW E KGH D + + WWPK +T EDL
Sbjct: 642 EIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDL 701
Query: 757 SGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFL 816
+I++WTAS HAA+NFGQYP+GG + NRPTL R+ +P E P Y++ + NPQ +L
Sbjct: 702 IQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYL 761
Query: 817 SSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIE 876
++ + + ++V + LS H+ DE YLG+ + +W D + L F +F + L IE
Sbjct: 762 RTITPKFETLIDLSVIEILSRHASDEIYLGE--RETPNWTTDKKALEAFKRFGSKLTGIE 819
Query: 877 KIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
IN RN D L+ R G PY LL SS G+T +GIPNSISI
Sbjct: 820 GKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 248/518 (47%), Gaps = 76/518 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 599 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 646
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 647 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 706
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 707 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 760
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ LI GGI++ S S G
Sbjct: 761 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGG 820
Query: 643 AMELSSAAYKSFWRFDMEA--LPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+ K F +++ LP L +RG+ +DPS G + Y DGL +W
Sbjct: 821 GH--VTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLPG-------FYYRDDGLALWE 869
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPKLETKE 754
AI+ ++ +A FY + V D E+Q+W ++ N GH D A E++E
Sbjct: 870 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESRE 926
Query: 755 DLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHT 814
L ++T +++T S QHAA+NF Q G+ PN P ++R P++ +
Sbjct: 927 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA-------TLQS 979
Query: 815 FLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEE 874
LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F LE+
Sbjct: 980 ILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQDKLED 1036
Query: 875 IEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 912
I K I RN++ + PY LLP P T
Sbjct: 1037 ISKKIKQRNENLEV---------PYIYLLPERIPNGTA 1065
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 160/518 (30%), Positives = 248/518 (47%), Gaps = 76/518 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 229 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 276
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 337 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 390
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ LI GGI++ S S G
Sbjct: 391 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGG 450
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+ K F +++ LP L +RG+ +DPS G + Y DGL +W
Sbjct: 451 GH--VTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLPG-------FYYRDDGLALWE 499
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPKLETKE 754
AI+ ++ +A FY + V D E+Q+W ++ N GH D A E++E
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESRE 556
Query: 755 DLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHT 814
L ++T +++T S QHAA+NF Q G+ PN P ++R P++ +
Sbjct: 557 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA-------TLQS 609
Query: 815 FLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEE 874
LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F LE+
Sbjct: 610 ILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQDKLED 666
Query: 875 IEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 912
I K I RN++ + PY LLP P T
Sbjct: 667 ISKKIKQRNENLEV---------PYIYLLPERIPNGTA 695
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 248/518 (47%), Gaps = 76/518 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 232 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 279
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 280 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 339
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 340 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 393
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HP++KLL PH+ L I+ + R+ LI GGI++ S S G
Sbjct: 394 THLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGG 453
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+ K F +++ LP L +RG+ +DPS G + Y DGL +W
Sbjct: 454 GH--VTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLPG-------FYYRDDGLALWE 502
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPKLETKE 754
AI+ ++ +A FY + V D E+Q+W ++ N GH D A E++E
Sbjct: 503 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESRE 559
Query: 755 DLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHT 814
L ++T +++T S QHAA+NF Q G+ PN P ++R P++ +
Sbjct: 560 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLRHPPPKKKGEA-------TLQS 612
Query: 815 FLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEE 874
LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F LE+
Sbjct: 613 ILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQDKLED 669
Query: 875 IEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 912
I K I RN++ + PY LLP P T
Sbjct: 670 ISKKIKQRNENLEV---------PYIYLLPERIPNGTA 698
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 247/518 (47%), Gaps = 76/518 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 229 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 276
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 337 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 390
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ L GGI++ S S G
Sbjct: 391 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGGIVDQSLSLGGG 450
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+ K F +++ LP L +RG+ +DPS G + Y DGL +W
Sbjct: 451 GH--VTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLPG-------FYYRDDGLALWE 499
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPKLETKE 754
AI+ ++ +A FY + V D E+Q+W ++ N GH D A E++E
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESRE 556
Query: 755 DLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHT 814
L ++T +++T S QHAA+NF Q G+ PN P ++R P++ +
Sbjct: 557 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA-------TLQS 609
Query: 815 FLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEE 874
LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F LE+
Sbjct: 610 ILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQDKLED 666
Query: 875 IEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 912
I K I RN++ + PY LLP P T
Sbjct: 667 ISKKIKQRNENLEV---------PYIYLLPERIPNGTA 695
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 247/518 (47%), Gaps = 76/518 (14%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NPV IL++ D P +T E + L G +++
Sbjct: 229 WHEDRWFGYQFLNGANPV---------ILTRCDAL---PSNFPVTNEHVNASLDRGKNLD 276
Query: 479 KAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKA 522
+ I++ ++I+D+ L+ P +E I +PD R A +F+ NK
Sbjct: 277 EEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKL 336
Query: 523 GMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLM 582
G L P+AI+++ P +P I+T H+ H W +AK + ++ HQL H L
Sbjct: 337 GHLMPIAIQINQEPGPENP----IWT-PHEENEH-DWMMAKFWLGVAESNFHQLNTHLLR 390
Query: 583 THASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRY 642
TH + E + ++T R L+S HPI+KLL PH+ L I+ + R+ L GGI++ S S G
Sbjct: 391 THLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGGIVDQSLSLGGG 450
Query: 643 AMELSSAAYKSFWRFDME--ALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+ K F +++ LP L +RG+ +DPS G + Y DGL +W
Sbjct: 451 GH--VTFMEKCFKEVNLQDYHLPNALKKRGV--DDPSKLPG-------FYYRDDGLALWE 499
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIK------NKGHHDKRNEAWWPKLETKE 754
AI+ ++ +A FY + V D E+Q+W ++ N GH D A E++E
Sbjct: 500 AIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGVPA---SFESRE 556
Query: 755 DLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHT 814
L ++T +++T S QHAA+NF Q G+ PN P ++R P++ +
Sbjct: 557 QLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEA-------TLQS 609
Query: 815 FLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEE 874
LS+LP++ QA K +A L+ S DE YLG N + W D + L+ ++F LE+
Sbjct: 610 ILSTLPSKSQAAKAIATVYILTKFSEDERYLG--NYSATAW-EDKDALDAINRFQDKLED 666
Query: 875 IEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTG 912
I K I RN++ + PY LLP P T
Sbjct: 667 ISKKIKQRNENLEV---------PYIYLLPERIPNGTA 695
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 240/508 (47%), Gaps = 66/508 (12%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEEL-HGLSVE 478
W D F Q L G NP ++ + D P + E++E+ L G ++E
Sbjct: 251 WRDDVWFGSQFLNGSNP---------EVIRRCDKL---PENFPVKNEMVEKLLDRGYTLE 298
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGM-LRPLAIELSLPPS 537
KA++E +FI DY +L I +++ D++ + FY K + P+AI+L P
Sbjct: 299 KAMKEGLIFITDYK--ILEGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLYQQPG 356
Query: 538 RSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQ 597
+N I+T D T W W +AK + D HQ++ H L H MEP +++ R
Sbjct: 357 ----ENNSIWTPLKD--TEWDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWRN 410
Query: 598 LSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA-MELSSAAYKSFWR 656
L S+HP++KLL+PH + + IN L R LI GG + S G + L Y+S
Sbjct: 411 LPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSV-T 469
Query: 657 FDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSE 716
FD L DL +RG+ G+R + Y D LL+W I ++V+ + +Y++
Sbjct: 470 FDSYDLVKDLRQRGV--------DGLR----KFYYKDDALLLWNVIHQFVQDIIQIYYND 517
Query: 717 PNSVTSDVELQAWWSEIKNKGH---HDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAA 773
+SV D E+Q W ++ G+ D ++ E +E+L +T++++T S QHAA
Sbjct: 518 DDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFENREELVHFLTVVVFTCSCQHAA 577
Query: 774 INFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQD 833
+NF Q G+ PN PTLMR+ P E K + ++SL + QA +++V +
Sbjct: 578 VNFSQMATYGFHPNSPTLMRQPPPTEKGKSNHKVI-------MASLANKHQAVTMVSVVN 630
Query: 834 TLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCG 893
L+T P E++LG + D KF +NL I K I RN+
Sbjct: 631 ALTTIYPTEKFLG---DYADNLFGDAAAHAAMAKFKSNLANITKQITERNQGM------- 680
Query: 894 AGIPPYELLLPSSGPGVTGRGIPNSISI 921
+ PY L+P +PNSI+I
Sbjct: 681 --VSPYTWLIPGH--------VPNSIAI 698
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 246/507 (48%), Gaps = 64/507 (12%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELH-GLSVE 478
W D F Q L G NPV I E P KL +T E++E L LS+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--EKL----------PVTTEMVECSLERQLSLE 291
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPP 536
+ +++ +FI+D+ LL I+ + P + A + + N A + P+AI+L+ P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 537 SRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHR 596
+P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +R
Sbjct: 350 GDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 597 QLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFW 655
QL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A K
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDL- 461
Query: 656 RFDMEALPADLLRRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFY 714
+ P + RGM ++ED I Y Y DGLL+W AI+ + V +Y
Sbjct: 462 TYASLCFPEAIKARGMESKED----------IPYYFYRDDGLLVWEAIRTFTAEVVDIYY 511
Query: 715 SEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAI 774
V D ELQ + +++ G +++ + ++++E LS +T++I+TAS QHAA+
Sbjct: 512 EGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAV 571
Query: 775 NFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDT 834
NFGQY + ++PN P MR P K ++ + + +LP + ++ +
Sbjct: 572 NFGQYDWASWIPNAPPTMRA------PPPTAKGVVTIEQ-IVDTLPDRGRSCWHLGAVWA 624
Query: 835 LSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGA 894
LS +E +LG + H+I P V +F NLE I +I RN++ +L
Sbjct: 625 LSQFQENELFLGMYPE--EHFIEKP-VKEAMARFRKNLEAIVSVIAERNENLQL------ 675
Query: 895 GIPPYELLLPSSGPGVTGRGIPNSISI 921
PY L P IPNS++I
Sbjct: 676 ---PYYYLAPDR--------IPNSVAI 691
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 246/507 (48%), Gaps = 64/507 (12%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELH-GLSVE 478
W D F Q L G NPV I E P KL +T E++E L LS+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--EKL----------PVTTEMVECSLERQLSLE 291
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPP 536
+ +++ +FI+D+ LL I+ + P + A + + N A + P+AI+L+ P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 537 SRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHR 596
+P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +R
Sbjct: 350 GDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 597 QLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFW 655
QL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A K
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDL- 461
Query: 656 RFDMEALPADLLRRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFY 714
+ P + RGM ++ED I Y Y DGLL+W AI+ + V +Y
Sbjct: 462 TYASLCFPEAIKARGMESKED----------IPYYFYRDDGLLVWEAIRTFTAEVVDIYY 511
Query: 715 SEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAI 774
V D ELQ + +++ G +++ + ++++E LS +T++I+TAS QHAA+
Sbjct: 512 EGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAV 571
Query: 775 NFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDT 834
NFGQY + ++PN P MR P K ++ + + +LP + ++ +
Sbjct: 572 NFGQYDWASWIPNAPPTMRA------PPPTAKGVVTIEQ-IVDTLPDRGRSCWHLGAVWA 624
Query: 835 LSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGA 894
LS +E +LG + H+I P V +F NLE I +I RN++ +L
Sbjct: 625 LSQFQENELFLGMYPE--EHFIEKP-VKEAMARFRKNLEAIVSVIAERNENLQL------ 675
Query: 895 GIPPYELLLPSSGPGVTGRGIPNSISI 921
PY L P IPNS++I
Sbjct: 676 ---PYYYLSPDR--------IPNSVAI 691
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 246/507 (48%), Gaps = 64/507 (12%)
Query: 420 WLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELH-GLSVE 478
W D F Q L G NPV I E P KL +T E++E L LS+E
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELP--EKL----------PVTTEMVECSLERQLSLE 291
Query: 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPP 536
+ +++ +FI+D+ LL I+ + P + A + + N A + P+AI+L+ P
Sbjct: 292 QEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIP 349
Query: 537 SRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHR 596
+P I+ DA W+ LAK V S+D VHQ + H L TH E + IA +R
Sbjct: 350 GDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYR 402
Query: 597 QLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFW 655
QL ++HPI+KLL H+R+T+ IN AR+ LI G+ + A+ + G +++ A K
Sbjct: 403 QLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDL- 461
Query: 656 RFDMEALPADLLRRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFY 714
+ P + RGM ++ED I Y Y DGLL+W AI+ + V +Y
Sbjct: 462 TYASLCFPEAIKARGMESKED----------IPYYFYRDDGLLVWEAIRTFTAEVVDIYY 511
Query: 715 SEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAI 774
V D ELQ + +++ G +++ + ++++E LS +T++I+TAS QHAA+
Sbjct: 512 EGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAV 571
Query: 775 NFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDT 834
NFGQY + ++PN P MR P K ++ + + +LP + ++ +
Sbjct: 572 NFGQYDWASWIPNAPPTMRA------PPPTAKGVVTIEQ-IVDTLPDRGRSCWHLGAVWA 624
Query: 835 LSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGA 894
LS +E +LG + H+I P V +F NLE I +I RN++ +L
Sbjct: 625 LSQFQENELFLGMYPE--EHFIEKP-VKEAMARFRKNLEAIVSVIAERNENLQL------ 675
Query: 895 GIPPYELLLPSSGPGVTGRGIPNSISI 921
PY L P IPNS++I
Sbjct: 676 ---PYYYLDPDR--------IPNSVAI 691
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 224/505 (44%), Gaps = 55/505 (10%)
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+R+F + RR R +W D+ F Q L G NP+ + + P P +
Sbjct: 204 NRIFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM------ 257
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFF-YN 520
EEL +EK ++ LF D+ LL I+ L ++ A+ V
Sbjct: 258 --------EELQA-QLEKELKAGTLFEADFA--LLDNIKANVILYCQQYLAAPLVMLKLQ 306
Query: 521 KAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 580
G L P+ I+L LP SSP + T +W LAK V S+D VH+L +H
Sbjct: 307 PDGKLMPMVIQLHLPKIGSSPPPLFLPTD-----PPMVWLLAKCWVRSSDFQVHELNSHL 361
Query: 581 LMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPG 640
L H E + +AT R L S+HP++KL+ PH+RYTLEIN AR L++ GI + S G
Sbjct: 362 LRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTG 421
Query: 641 RYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+F + P DL RG+ L +E YA D L +W
Sbjct: 422 GGGHVQLLQQAGAFLTYRSFCPPDDLADRGL------------LGVESSFYAQDALRLWE 469
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGII 760
I +V+ + +Y +V D+ELQ+W EI G + + + L++ +
Sbjct: 470 IISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFV 529
Query: 761 TIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLP 820
T+ I+T +GQH++I+ GQ + +VPN P MR P D E T +++LP
Sbjct: 530 TMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE--------TVMATLP 581
Query: 821 TQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIIN 880
Q++ M++ L P LGQ + + + PE + +KF L ++K I
Sbjct: 582 NLKQSSLQMSIVWQLGRDQPIMVPLGQHQE---EYFSGPEPRAVLEKFREELAIMDKEIE 638
Query: 881 TRNKDFRLKGRCGAGIPPYELLLPS 905
RN+ + PYE L PS
Sbjct: 639 VRNEKLDI---------PYEYLRPS 654
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 224/505 (44%), Gaps = 55/505 (10%)
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
+R+F + RR R +W D+ F Q L G NP+ + + P P +
Sbjct: 204 NRIFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPPGM------ 257
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFF-YN 520
EEL +EK ++ LF D+ LL I+ L ++ A+ V
Sbjct: 258 --------EELQA-QLEKELKAGTLFEADFA--LLDNIKANVILYCQQYLAAPLVMLKLQ 306
Query: 521 KAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 580
G L P+ I+L LP SSP + T +W LAK V S+D VH+L +H
Sbjct: 307 PDGKLMPMVIQLHLPKIGSSPPPLFLPTD-----PPMVWLLAKCWVRSSDFQVHELNSHL 361
Query: 581 LMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPG 640
L H E + +AT R L S+HP++KL+ PH+RYTLEIN AR L++ GI + S G
Sbjct: 362 LRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTG 421
Query: 641 RYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWC 700
+F + P DL RG+ L +E YA D L +W
Sbjct: 422 GGGHVQLLQQAGAFLTYRSFCPPDDLADRGL------------LGVESSFYAQDALRLWE 469
Query: 701 AIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGII 760
I +V+ + +Y +V D+ELQ+W EI G + + + L++ +
Sbjct: 470 IISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFV 529
Query: 761 TIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFLSSLP 820
T+ I+T +GQH++I+ GQ + +VPN P MR P D E T +++LP
Sbjct: 530 TMCIFTCTGQHSSIHLGQLDWFTWVPNAPCTMRLPPPTTKDATLE--------TVMATLP 581
Query: 821 TQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIIN 880
Q++ M++ L P LGQ + + + PE + +KF L ++K I
Sbjct: 582 NLHQSSLQMSIVWQLGRDQPIMVPLGQHQE---EYFSGPEPRAVLEKFREELAIMDKEIE 638
Query: 881 TRNKDFRLKGRCGAGIPPYELLLPS 905
RN+ + PYE L PS
Sbjct: 639 VRNEKLDI---------PYEYLRPS 654
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 227/528 (42%), Gaps = 69/528 (13%)
Query: 398 LNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYG 457
L+ +R+F + R R +W D F Q L G NP+ + E P K P +
Sbjct: 111 LDSFNRIFWSGQSKLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVELPARLKFPPGM-- 168
Query: 458 PPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVF 517
EEL +EK ++ LF D+ LL I+ L ++ A V
Sbjct: 169 ------------EELQA-QLEKELQGGTLFEADFS--LLDGIKANVILSSQQYLAVPLVM 213
Query: 518 F-YNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQL 576
G L P+ I+L LP S + T +W LAK V S+D +H+L
Sbjct: 214 LKLQPDGKLLPMVIQLQLPREGSPLPPLFLPT-----DPPMVWLLAKCWVRSSDFQLHEL 268
Query: 577 VNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEAS 636
+H L H E +AT R L S+HPI+KLL PH RYT+EIN AR L++ GI +
Sbjct: 269 HSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQV 328
Query: 637 FSP---GRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAA 693
S G + +AA ++ F P DL RG+ L +E YA
Sbjct: 329 VSTGGGGHVELLRRAAALLTYSSF---CPPDDLADRGL------------LGVESSFYAQ 373
Query: 694 DGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETK 753
D L +W I +VE V+ Y SV D ELQAW E G ++ + L++K
Sbjct: 374 DALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDRGFPVSLQSK 433
Query: 754 EDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQH 813
E L +T+ I+T +GQH++ + GQ + +VPN P MR P D E
Sbjct: 434 EQLCHFVTMCIFTCTGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTTKDATLE-------- 485
Query: 814 TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLE 873
T +++LP QA+ M++ L P LGQ + + + P + KF L
Sbjct: 486 TVMATLPNFHQASLQMSITWQLGRCQPTMVALGQHEE---EYFSGPGPKAVLTKFREELA 542
Query: 874 EIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921
++K I RN L PYE L PS + NS++I
Sbjct: 543 ALDKDIEVRNAKLAL---------PYEYLRPSR--------VENSVAI 573
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 150/510 (29%), Positives = 223/510 (43%), Gaps = 62/510 (12%)
Query: 402 DRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPES 461
D++F + A+ + R W D F+ Q L G NP+ + P L +
Sbjct: 50 DQIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVLPSGM------ 103
Query: 462 AITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFY 519
EEL +EK ++ LF D+ +LL I N + K Y A +
Sbjct: 104 --------EELRA-QLEKELQNGSLFEADF--ILLDGIPA-NVIRGEKQYLAAPLVMLKM 151
Query: 520 NKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNH 579
G L+P+ I++ P S + + A W LAK+ V ++D +H++ H
Sbjct: 152 EPNGKLQPMVIQIQPPNPSSPTPTLFLPSDPPLA-----WLLAKSWVRNSDFQLHEIQYH 206
Query: 580 WLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSP 639
L TH E +AT R L +HPI+K L PH+RYT+EIN AR LI+ GGI + + S
Sbjct: 207 LLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVST 266
Query: 640 ---GRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGL 696
G + +AA ++ P DL RG+ +P + YA D L
Sbjct: 267 GGGGHVQLLRRAAAQLTYCSL---CPPDDLADRGLL----GLPGAL--------YAHDAL 311
Query: 697 LIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDL 756
+W I +VE V FY + V D ELQAW EI G ++ + +++ L
Sbjct: 312 RLWEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQL 371
Query: 757 SGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPGYEKFLLNPQHTFL 816
+T+ ++T + QHAAIN GQ + +VPN P MR P + T +
Sbjct: 372 CHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTKED-------VTMATVM 424
Query: 817 SSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIE 876
SLP QA MA+ LS PD LG + + + P+ + ++F +LE++E
Sbjct: 425 GSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE---KYFSGPKPKAVLNQFRTDLEKLE 481
Query: 877 KIINTRNKDFRLKGRCGAGIPPYELLLPSS 906
K I RN+ PYE L PS
Sbjct: 482 KEITARNEQLDW---------PYEYLKPSC 502
>pdb|1KEA|A Chain A, Structure Of A Thermostable Thymine-Dna Glycosylase
Length = 221
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 379 DDEQNGRSKLFLATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAG-VNPV 437
DD N + K+F++T++ F N R F + RD + L R+T AG V +
Sbjct: 2 DDATNKKRKVFVSTIL-TFWNTDRRDFPWRHT----RDPYVILITEILLRRTTAGHVKKI 56
Query: 438 NIEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEEKRLFILDYHDLLLP 497
+F ++ I P+S I K++ E L E+ E R+ I DY +
Sbjct: 57 YDKFFVKYKCFED----ILKTPKSEIAKDIKEIGLSNQRAEQLKELARVVINDYGGRVPR 112
Query: 498 FIEKINSLPDRKTYASRTVF---FYNKAGML 525
+ I LP Y V F KA M+
Sbjct: 113 NRKAILDLPGVGKYTCAAVMCLAFGKKAAMV 143
>pdb|3NYB|A Chain A, Structure And Function Of The Polymerase Core Of Tramp, A
Rna Surveillance Complex
Length = 323
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 171 NPGAILIT--NLHGKEFYLLEIVVHGFDGGPVFFPANTW 207
N G +LI L+GK F ++ + DG PV+FP +TW
Sbjct: 213 NLGVLLIEFFELYGKNFGYDDVALGSSDGYPVYFPKSTW 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,637,805
Number of Sequences: 62578
Number of extensions: 1240814
Number of successful extensions: 3116
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2894
Number of HSP's gapped (non-prelim): 41
length of query: 921
length of database: 14,973,337
effective HSP length: 108
effective length of query: 813
effective length of database: 8,214,913
effective search space: 6678724269
effective search space used: 6678724269
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)