Query 002436
Match_columns 921
No_of_seqs 299 out of 671
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 23:56:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002436.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002436hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 7E-279 1E-283 2406.2 77.0 902 11-921 10-918 (918)
2 PLN02264 lipoxygenase 100.0 7E-274 1E-278 2364.1 70.2 834 81-921 83-919 (919)
3 PLN02337 lipoxygenase 100.0 6E-269 1E-273 2330.9 74.0 833 83-921 19-866 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 2E-207 3E-212 1808.9 28.1 662 232-905 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 100.0 1E-41 2.2E-46 332.1 15.1 135 83-223 1-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.1 2.6E-10 5.7E-15 106.1 10.8 84 117-211 20-105 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.7 5.9E-08 1.3E-12 90.7 8.1 64 158-221 46-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.5 6.7E-07 1.5E-11 84.6 11.3 64 158-221 49-116 (116)
9 cd02899 PLAT_SR Scavenger rece 97.8 9.9E-05 2.1E-09 70.6 9.4 79 117-211 20-99 (109)
10 cd01753 PLAT_LOX PLAT domain o 97.5 0.00073 1.6E-08 64.9 10.3 53 159-211 50-105 (113)
11 cd01756 PLAT_repeat PLAT/LH2 d 97.3 0.0023 5.1E-08 61.7 11.5 95 116-221 19-118 (120)
12 cd01752 PLAT_polycystin PLAT/L 96.9 0.0062 1.3E-07 58.8 10.2 85 117-212 20-108 (120)
13 cd01757 PLAT_RAB6IP1 PLAT/LH2 96.9 0.0033 7.3E-08 60.7 7.7 54 159-213 43-100 (114)
14 cd01754 PLAT_plant_stress PLAT 96.1 0.015 3.2E-07 57.5 6.9 53 158-212 59-118 (129)
15 KOG2675 Adenylate cyclase-asso 27.2 1.8E+02 0.0038 34.7 7.3 115 588-748 91-221 (480)
16 PF10474 DUF2451: Protein of u 24.7 47 0.001 36.2 2.2 24 703-732 178-201 (234)
17 TIGR03124 ctirate_citX holo-AC 24.1 35 0.00077 35.4 1.0 28 259-295 107-134 (165)
18 cd01755 PLAT_lipase PLAT/ LH2 22.5 3.8E+02 0.0082 26.1 7.7 49 158-206 47-105 (120)
19 PF10281 Ish1: Putative stress 20.2 1.5E+02 0.0032 23.2 3.6 31 722-761 5-35 (38)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=6.8e-279 Score=2406.18 Aligned_cols=902 Identities=81% Similarity=1.304 Sum_probs=843.7
Q ss_pred ccccccccCCCCccccCCCccccccccCccc---ceEEEEeCCCccchhhhccccccccccCCeeeccCCC-CcceEEEE
Q 002436 11 TGPALRRVPAIPGAVSNGNLRPARVSKSKFC---PIRAVVNSDQNKATEAATKSVDAKDVNGSLLVSSSSS-KEGLVDVR 86 (921)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 86 (921)
.|-.++.+|+ .-++|+.|+.+|--+++. +|||||++++ ||.+...+.--+|-+-||.+..++++ -....+||
T Consensus 10 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 85 (918)
T PLN02305 10 SGVSLRASPA---FSALGRRRRTRVPISRSPVAGSIRAVISSED-KAVEESGGESANKSVDGSSLLPSSRSKYAGGIDVR 85 (918)
T ss_pred CceEEeeCcc---cccccceeeeecccccCCCCCceeEEecccc-cccccccccccccccccccccccccchhccCCeEE
Confidence 3445666776 455688888777666543 8999999876 55554455555677777777766632 22346999
Q ss_pred EEEEEEecccccccccchhhhhhhhhhcCCcEEEEEeecccCCCCCCC-ccccccccccccCCCCCCCcceEEEEEEEee
Q 002436 87 AVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEANFGV 165 (921)
Q Consensus 87 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 165 (921)
|+||||+|++++++++.++++|+++|++||+|+|||||++++|+||+| ++ +++|++|++++...+++ ++|+++|+|
T Consensus 86 ~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~-~~~l~~~~~~~~~~~~~--~~~~~~f~~ 162 (918)
T PLN02305 86 AVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSV-ESSVRGWLPKPSNDPHI--VEYAADFTV 162 (918)
T ss_pred EEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccccCCCCCcccc-cchhhccccCCCCCCCc--eEEEEEEee
Confidence 999999999999999999999999999999999999999999999988 66 99999999874432667 799999999
Q ss_pred cCCCCCceEEEEEecCCCceeEeEEEEeecCCCeEEEeecccccCCCCCCCCeEEeeccccCcCCCChhhHHHHHHHHHh
Q 002436 166 PSDFGNPGAILITNLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLRREDLLS 245 (921)
Q Consensus 166 ~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~~~v~F~CnsWV~~~~~~~~~rifF~n~~yLP~~tp~~l~~~Re~EL~~ 245 (921)
|++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||+|||++|++|||+||++
T Consensus 163 ~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~eL~~ 242 (918)
T PLN02305 163 PFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLS 242 (918)
T ss_pred ccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCcccCCCCCc
Q 002436 246 IRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYVPRDETF 325 (921)
Q Consensus 246 lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg~~~pyPRR~rTgr~~~~~dp~~e~~~~~~~~~yvPrDe~f 325 (921)
|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+||++||+||||...+..+||||||+|
T Consensus 243 lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvPrDE~f 322 (918)
T PLN02305 243 LRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRDETF 322 (918)
T ss_pred hcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCCCCCCc
Confidence 99999999999999999999999999999999999999996699999999999999999999999765556899999999
Q ss_pred chhhhcccccchHHHHHHhhHHHHHHhccCCCCCCCChHhHHHHhhCCccCCCchhhchhhhhH-HH-HHHHHHhhcccc
Q 002436 326 EEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF-LA-TVIKQFLNVGDR 403 (921)
Q Consensus 326 ~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~sf~di~~Ly~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 403 (921)
+++|++||+++++|+++|.++|.|+++++.++++|+||+||++||++|+++|.. .....+.+ +| .+.+.++++++.
T Consensus 323 ~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~--~~~~~~~~p~~~~~~~~i~~~~~~ 400 (918)
T PLN02305 323 EEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTE--EPKDIGLNPFLGNFMKQVLSVSER 400 (918)
T ss_pred ccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCch--hhhhhhcCCchHHHHHHhhhcccc
Confidence 999999999999999999999999999988899999999999999999999852 11222223 21 344445888999
Q ss_pred cccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCcchHHHHHhhhcCCCHHHHHhc
Q 002436 404 LFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVEKAIEE 483 (921)
Q Consensus 404 ~~~fp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~G~Tl~eal~~ 483 (921)
++|||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||+|||+.+|+|+||+|||++
T Consensus 401 ~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G~TleeAl~~ 480 (918)
T PLN02305 401 LLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEGMTVEKAIEE 480 (918)
T ss_pred cccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCCCcHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCCCCCCceeeCCCCCCChhHHHHHH
Q 002436 484 KRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWIWKLAK 563 (921)
Q Consensus 484 grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VfTP~d~~~~~~~W~LAK 563 (921)
|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++..++||||+++++++|.|+|||
T Consensus 481 ~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~W~LAK 560 (918)
T PLN02305 481 KRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAK 560 (918)
T ss_pred CCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777677789999987777899999999
Q ss_pred HHHhhhhhhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchHHHhhccccCCccccccccCchhH
Q 002436 564 AHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA 643 (921)
Q Consensus 564 ~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~~G~~~ 643 (921)
|||++||++|||+|+||++||++|||||||||||||++|||||||+||||+||+||++||++|||+||+||++|++|+|+
T Consensus 561 ~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fspg~~~ 640 (918)
T PLN02305 561 AHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYA 640 (918)
T ss_pred HHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeeccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCccCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHHHcccccCcccccCCC
Q 002436 644 MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSD 723 (921)
Q Consensus 644 ~elss~~Yk~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~~V~~D 723 (921)
|||++++|++.|+|++++||+||++|||+++|+++||||+|.|||||||+|||+||+||++||++||++||++|++|++|
T Consensus 641 ~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~~V~~D 720 (918)
T PLN02305 641 MELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSD 720 (918)
T ss_pred HHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChhhhccC
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheecccccccccccCCcccccccCCcccccccCCCCCCChh
Q 002436 724 VELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQENDPG 803 (921)
Q Consensus 724 ~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVNfgQy~y~gfvPN~P~~lr~p~P~~g~~e 803 (921)
.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++||++++.+
T Consensus 721 ~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~~~~~~ 800 (918)
T PLN02305 721 LELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQENDPD 800 (918)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred hhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002436 804 YEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANLEEIEKIINTRN 883 (921)
Q Consensus 804 ~~~l~~~pe~~~L~tLP~~~qa~~~m~~~~lLS~h~~de~yLG~~~~~~~~~~~d~~~~~A~~~F~~~L~~Ie~~I~~RN 883 (921)
|++|+.+||++||++||++.||+.+|+++++||+|++||+||||+.+.+..|+.|+++++|+++|+++|++||++|++||
T Consensus 801 ~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE~~I~~RN 880 (918)
T PLN02305 801 YEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERN 880 (918)
T ss_pred HHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987222799999999999999999999999999999
Q ss_pred cccccccccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002436 884 KDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921 (921)
Q Consensus 884 ~~~~lknr~g~~~~PY~~L~Ps~~~g~t~~gIPNSIsI 921 (921)
++++||||+||+++||+||+|+++||||||||||||||
T Consensus 881 ~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 881 KDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918 (918)
T ss_pred CCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence 99999999999999999999999999999999999998
No 2
>PLN02264 lipoxygenase
Probab=100.00 E-value=6.8e-274 Score=2364.12 Aligned_cols=834 Identities=58% Similarity=1.030 Sum_probs=801.4
Q ss_pred ceEEEEEEEEEEecccccccccchhhhhhhhhhcCCcEEEEEeecccCCCCCCC-ccccccccccccCCCCCCCcceEEE
Q 002436 81 GLVDVRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQY 159 (921)
Q Consensus 81 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (921)
.+++|||+|+||+|++++++++.++++|+++|++||+|+|||||++++|+||+| +|++++|++|++++.+.+++ ++|
T Consensus 83 ~~~~i~~~v~~~~~~~~~~~~~~~~~~D~~~~~~G~~v~lqLVSs~~~~~tg~~~~~~~a~l~~~~~~~~~~~~~--~~y 160 (919)
T PLN02264 83 VKFKVRAVVTVRNKNKEDLKETLVKHLDAFTDKIGRNVVLELISTQVDPKTKEPKKSKAAVLKDWSKKSNIKAER--VHY 160 (919)
T ss_pred eEEEEEEEEEEEeccccchhhcccchhhHHHHHhCCeEEEEEEeccccCCCCCccCCCcchhcccccCCCCCCCc--eEE
Confidence 468999999999999999999999999999999999999999999999999998 99999999999875556778 799
Q ss_pred EEEEeecCCCCCceEEEEEecCCCceeEeEEEEeecCCCeEEEeecccccCCCCCCCCeEEeeccccCcCCCChhhHHHH
Q 002436 160 EANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDGGPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKDLR 239 (921)
Q Consensus 160 ~~~f~~~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~~~v~F~CnsWV~~~~~~~~~rifF~n~~yLP~~tp~~l~~~R 239 (921)
+|+|+||++||+||||+|+|+|++||||++|+|+++|+|+|||+|||||||+++|+++||||+||+|||+|||++|++||
T Consensus 161 ~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~R 240 (919)
T PLN02264 161 TAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALR 240 (919)
T ss_pred EEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEEEecCCccccCcCCCCCceEecCCCcCcccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCccc
Q 002436 240 REDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCRTGRPPTKTDPLCESRIEKPHPVYV 319 (921)
Q Consensus 240 e~EL~~lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg~~~pyPRR~rTgr~~~~~dp~~e~~~~~~~~~yv 319 (921)
|+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+||+|||++|||...+..+||
T Consensus 241 e~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~~~iYv 320 (919)
T PLN02264 241 EKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYV 320 (919)
T ss_pred HHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCCCCCCCCCcCCCCCCCCCCcccccccCCCceeC
Confidence 99999999999999999999999999999999999999999999997799999999999999999999999765556899
Q ss_pred CCCCCcchhhhcccccchHHHHHHhhHHHHHHhccCCCCCCCChHhHHHHhhCCccCCCchhhchhhhhH-HHHHHHHHh
Q 002436 320 PRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF-LATVIKQFL 398 (921)
Q Consensus 320 PrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~sf~di~~Ly~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 398 (921)
||||+|+++|++||+++++|+++|.++|.++++++.+ +|+||+||++||++|+++|.. ..++..+.+ +|.+.+.++
T Consensus 321 PrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~~Ly~~g~~l~~~-~~~~~~~~~p~~~~~~~~~ 397 (919)
T PLN02264 321 PRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEIDSLYKEGLLLKLG-FQDDIFKKFPLPKVVTTLQ 397 (919)
T ss_pred CCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHHHHHhcCCcCCcc-hhhhHhhcCChHHHHHHhh
Confidence 9999999999999999999999999999999998854 999999999999999998852 112223333 434555558
Q ss_pred hcccccccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCcchHHHHHhhhcCCCHH
Q 002436 399 NVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELHGLSVE 478 (921)
Q Consensus 399 ~~~~~~~~fp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~G~Tl~ 478 (921)
++++.++|||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||+.||+++|+||++||+.+|+|+||+
T Consensus 398 ~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~G~Tl~ 477 (919)
T PLN02264 398 ESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDGLSVQ 477 (919)
T ss_pred hcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccCCCcHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCCCCCCceeeCCCCCCChhH
Q 002436 479 KAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSSPQNKHIYTHGHDATTHWI 558 (921)
Q Consensus 479 eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VfTP~d~~~~~~~ 558 (921)
|||++|||||+||||++|||++++|.++++++|||+||||++++|+|+||||||++++++++++.++||||+++++++|.
T Consensus 478 eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~~d~~~~w~ 557 (919)
T PLN02264 478 QALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPVDATSNWM 557 (919)
T ss_pred HHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCEeeEEEEecCCCCCCCcCcceeECCCCCCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999987665677899999776778999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchHHHhhccccCCcccccccc
Q 002436 559 WKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFS 638 (921)
Q Consensus 559 W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~f~ 638 (921)
|+||||||++||++|||+|+||++||++|||||||||||||.+|||||||.||||+||+||++||++|||+||++|++|+
T Consensus 558 W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiid~~f~ 637 (919)
T PLN02264 558 WQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQTLISADGVIESCFT 637 (919)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHhccccCCccCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHHHcccccCccc
Q 002436 639 PGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPN 718 (921)
Q Consensus 639 ~G~~~~elss~~Yk~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~ 718 (921)
+|+++|||++++|++.|+|++++||+||++|||+++|+++||||++.|||||||+|||+||+||++||++||++||++|+
T Consensus 638 pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv~~YY~~D~ 717 (919)
T PLN02264 638 AGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPDPS 717 (919)
T ss_pred cchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchhhccCCCcchhhHHHHHHHHHHHHHHHHHHhCCChh
Confidence 99999999999999779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheecccccccccccCCcccccccCCcccccccCCCC
Q 002436 719 SVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLMRKLVPQ 798 (921)
Q Consensus 719 ~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVNfgQy~y~gfvPN~P~~lr~p~P~ 798 (921)
+|++|.|||+||+||++.||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++||++||+
T Consensus 718 ~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~rrp~P~ 797 (919)
T PLN02264 718 LICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPD 797 (919)
T ss_pred hhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHHHHhhhhhhhhhhcCcccccccCCCCChHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 002436 799 ENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHS-HWINDPEVLNMFDKFSANLEEIEK 877 (921)
Q Consensus 799 ~g~~e~~~l~~~pe~~~L~tLP~~~qa~~~m~~~~lLS~h~~de~yLG~~~~~~~-~~~~d~~~~~A~~~F~~~L~~Ie~ 877 (921)
+++++|++|+.+|+++||++||++.||+.+|+++++||+|++||+||||+.. + +|+.|+++++||++|+++|++||+
T Consensus 798 ~~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~yLG~~~~--~~~w~~D~~~~~af~rF~~~L~eIe~ 875 (919)
T PLN02264 798 ESDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQ--PSIWTGDAEIVEAFYGFSAEIGRIEK 875 (919)
T ss_pred CCChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCceeccCCCC--ccccccCHHHHHHHHHHHHHHHHHHH
Confidence 9889999999999999999999999999999999999999999999999875 4 899999999999999999999999
Q ss_pred HHHhhccccccccccCCCCCCceeecCCCCCCCccCCcCccccC
Q 002436 878 IINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 921 (921)
Q Consensus 878 ~I~~RN~~~~lknr~g~~~~PY~~L~Ps~~~g~t~~gIPNSIsI 921 (921)
+|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus 876 ~I~~RN~~~~~knR~G~~~~PY~lL~P~s~~G~T~~gIPNSISI 919 (919)
T PLN02264 876 EIEKRNADPSRRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVSI 919 (919)
T ss_pred HHHHHcCCccccccCCCCCCCceeeCCCCCCCCCcCCCCCcccC
Confidence 99999999999999999999999999999999999999999998
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=6.2e-269 Score=2330.95 Aligned_cols=833 Identities=47% Similarity=0.822 Sum_probs=799.6
Q ss_pred EEEEEEEEEEecccccccccchhhhhhhhhhcCCcEEEEEeecccCC-CCC-CC-ccccccccccccC-CCCCCCcceEE
Q 002436 83 VDVRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDP-VTN-SG-KSVESAVRGWLPK-PVTSSNVNIFQ 158 (921)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~-~~~-~~-~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (921)
.+|||+||||+|++++++++.++++|+++|++||+|+|||||++++| +|| +| +|++++|++|+++ +.+.+++ ++
T Consensus 19 ~~~~~~v~l~~k~~ld~~~~~~~~lD~~~~l~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~--~~ 96 (866)
T PLN02337 19 EKIKGTVVLMKKNVLDFNDFNASVLDRVHELLGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGE--SA 96 (866)
T ss_pred ceEEEEEEEEEecccchhhcccchhhhHHHhcCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCc--eE
Confidence 38999999999999999999999999999999999999999999987 788 77 8999999999987 5667788 79
Q ss_pred EEEEEeecCCCCCceEEEEEecCCCceeEeEEEEeecCC-CeEEEeecccccCCCCCCCCeEEeeccccCcCCCChhhHH
Q 002436 159 YEANFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDG-GPVFFPANTWIHSRKDNAESRIIFKNQAYLPSQTPAGIKD 237 (921)
Q Consensus 159 ~~~~f~~~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~-~~v~F~CnsWV~~~~~~~~~rifF~n~~yLP~~tp~~l~~ 237 (921)
|+|+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+||+|||++||++|++
T Consensus 97 y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~~ 176 (866)
T PLN02337 97 FKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRP 176 (866)
T ss_pred EEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHHHHH
Confidence 999999999999999999999999999999999999996 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCC-CCCCCCCCCCCCCCCCCCCCCCcccCCC-CC
Q 002436 238 LRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRTGRPPTKTDPLCESRIEK-PH 315 (921)
Q Consensus 238 ~Re~EL~~lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg-~~~pyPRR~rTgr~~~~~dp~~e~~~~~-~~ 315 (921)
|||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+||++||+||||... +.
T Consensus 177 ~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~~~~~ 256 (866)
T PLN02337 177 YREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLPLLSL 256 (866)
T ss_pred HHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccccCCC
Confidence 999999999999999999999999999999999999999999999999 6799999999999999999999999654 34
Q ss_pred CcccCCCCCcchhhhcccccchHHHHHHhhHHHHHHhccCCCCCCCChHhHHHHhhCCccCCCchhhchhhhhH-HHHHH
Q 002436 316 PVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF-LATVI 394 (921)
Q Consensus 316 ~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~sf~di~~Ly~~~~~~~~~~~~~~~~~~~-~~~~~ 394 (921)
.+||||||+|+++|++||+++++|+++|.++|.|+++++.+..+|++|+||++||++|+++|..+.++.+.+.+ +++++
T Consensus 257 ~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i~~ly~~g~~lp~~~~~~~~~~~~p~~~~~ 336 (866)
T PLN02337 257 NIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPLLEELRKNIPLEMLK 336 (866)
T ss_pred CcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhhcCCCCCCchHHHHhhhcChHHHHH
Confidence 58999999999999999999999999999999999999888899999999999999999998643333333323 46678
Q ss_pred HHHhhcccccccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCcchHHHHHhhhcC
Q 002436 395 KQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELIEEELHG 474 (921)
Q Consensus 395 ~~~~~~~~~~~~fp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i~~~l~G 474 (921)
++++++++.++|||+|+||++|+++|++|+|||||||||+||++|+||++||++|+|||++||+++|+||+|||++.|+|
T Consensus 337 ~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~v~~~L~g 416 (866)
T PLN02337 337 ELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEG 416 (866)
T ss_pred HHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHHHHhccCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCC--CCCCceeeCCCC
Q 002436 475 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSS--PQNKHIYTHGHD 552 (921)
Q Consensus 475 ~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~--~~~~~VfTP~d~ 552 (921)
+||+|||++|||||+||||.+|||+.++|...++ .|||+||||++++|+|+||||||++|+..++ ++.++||||+++
T Consensus 417 ~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k-~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~VfTP~~~ 495 (866)
T PLN02337 417 LTVQEALEKNRLFILDHHDALMPYLRRINSTSTK-TYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKVYTPAED 495 (866)
T ss_pred ccHHHHHHcCCEEEEecchhcCcccccccCCCCc-cccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCeECCCCC
Confidence 9999999999999999999999999999986554 9999999999999999999999998875433 467999999987
Q ss_pred CCChhHHHHHHHHHhhhhhhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchHHHhhccccCCcc
Q 002436 553 ATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGI 632 (921)
Q Consensus 553 ~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGi 632 (921)
++++|.|+||||||++||++|||+|+||++||++||||||||+||||++|||||||+||||+||+||++||++||++||+
T Consensus 496 ~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGi 575 (866)
T PLN02337 496 GVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGI 575 (866)
T ss_pred CCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHheeCCCCe
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCchhHHHHHHHHHhccccCCccCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHHHccc
Q 002436 633 IEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAH 712 (921)
Q Consensus 633 ie~~f~~G~~~~elss~~Yk~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdYpYrdDGL~IW~AI~~~V~~yv~~ 712 (921)
+|+++++|+|+|||++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++||++
T Consensus 576 id~~~~~g~~~~els~~~yk~-w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~i~dYPYrdDGL~iW~AI~~~V~~yv~~ 654 (866)
T PLN02337 576 LESTVFPGKYALEMSSVVYKN-WNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETWVKEYCAF 654 (866)
T ss_pred eeeeeccchhHHHHHHHHHhc-CCcccccCHHHHHHcCCCccccccccccccccCCCcchhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheecccccccccccCCcccccccCCccccc
Q 002436 713 FYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNRPTLM 792 (921)
Q Consensus 713 YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVNfgQy~y~gfvPN~P~~l 792 (921)
||++|++|++|.|||+||+||+++|||++++++|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|++|
T Consensus 655 YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfvPN~P~~~ 734 (866)
T PLN02337 655 YYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLPNRPTVS 734 (866)
T ss_pred hCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChhhhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCHHHHHHHHHHHHHH
Q 002436 793 RKLVPQENDPGYEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFDKFSANL 872 (921)
Q Consensus 793 r~p~P~~g~~e~~~l~~~pe~~~L~tLP~~~qa~~~m~~~~lLS~h~~de~yLG~~~~~~~~~~~d~~~~~A~~~F~~~L 872 (921)
|++||++|+.+|++|..+||+++|++||++.||+.+|+++++||+|++||+|||+|++ +.|+.|+++++|+++|+++|
T Consensus 735 r~~~P~~~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yLG~~~~--~~w~~d~~~~~a~~~F~~~L 812 (866)
T PLN02337 735 RRFMPEPGTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRDT--PEWTSDAEPLEAFKRFGERL 812 (866)
T ss_pred cCCCCCCCchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceeccCcCC--cccccCHHHHHHHHHHHHHH
Confidence 9999988888999999999999999999999999999999999999999999999987 69999999999999999999
Q ss_pred HHHHHHHHhhccccccccccCCCCCCceeecCCC-----CCCCccCCcCccccC
Q 002436 873 EEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSS-----GPGVTGRGIPNSISI 921 (921)
Q Consensus 873 ~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Ps~-----~~g~t~~gIPNSIsI 921 (921)
++||++|++||+++++|||+||+++||+||+|++ +||||||||||||||
T Consensus 813 ~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 813 VEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred HHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 9999999999999999999999999999999999 999999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=1.5e-207 Score=1808.90 Aligned_cols=662 Identities=57% Similarity=0.987 Sum_probs=576.4
Q ss_pred ChhhHHHHHHHHHhhhcCCCCcccccCeeeecccccCCCCCCCCCCCccccCCC-CCCCCCCCCCCCCCCCCCCCCCccc
Q 002436 232 PAGIKDLRREDLLSIRGNGKGERKHHERIYDYAVYNDLGNPDKDKDLARPVLSG-EERPYPRRCRTGRPPTKTDPLCESR 310 (921)
Q Consensus 232 p~~l~~~Re~EL~~lrg~g~g~rk~~driYdyd~yndlG~pd~~~~~~rpvlgg-~~~pyPRR~rTgr~~~~~dp~~e~~ 310 (921)
|++|++|||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 789999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred CCCCCCcccCCCCCcchhhhcccccchHHHHHHhhHHHHHHhccCCCCCCCChHhHHHHhhCCccCCCchhhchhhhhH-
Q 002436 311 IEKPHPVYVPRDETFEEIKQNTFSSGRLKAVLHNLIPSIAASLSSSDIPFTCFSDIDKLYNSGFLLKDDDEQNGRSKLF- 389 (921)
Q Consensus 311 ~~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~f~sf~di~~Ly~~~~~~~~~~~~~~~~~~~- 389 (921)
.. ++||||||+|++.|++||.++++|+++|.++|.|++++..+..+|+||+||++||++|+++|.. ..+.+
T Consensus 81 ~~---~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~~~-----~~~~~~ 152 (667)
T PF00305_consen 81 SG---DIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLPTD-----LLKKLI 152 (667)
T ss_dssp -S---SGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE--HH-----HHCCHT
T ss_pred cc---cccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccchhh-----HhhhcC
Confidence 43 5999999999999999999999999999999999999877889999999999999999888732 22222
Q ss_pred -HHHHHHHHhhcccccccccCchhcccCcccccccHHHHHHHhcCCCccccccccCCCCCCCCCCccCCCCCCcchHHHH
Q 002436 390 -LATVIKQFLNVGDRLFKYETPAVIRRDRFAWLRDNEFARQTLAGVNPVNIEFLKEFPILSKLDPAIYGPPESAITKELI 468 (921)
Q Consensus 390 -~~~~~~~~~~~~~~~~~fp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~Irr~~e~P~~s~ld~~~yg~~~s~IT~e~i 468 (921)
++.++++++.++++++|||+|+|++.++++|++|+|||||+|||+||++|+||++||++|+||+++||+++|+||+|||
T Consensus 153 ~~~~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i 232 (667)
T PF00305_consen 153 PLELLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHI 232 (667)
T ss_dssp TSTTCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHH
T ss_pred cHHHHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHh
Confidence 3345667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCHHHHHhcCCEEEEecccccchhhhcccCCCCcccccceeEEEeeCCCceeeEEEEecCCCCCCCCCCCceee
Q 002436 469 EEELHGLSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPSRSSPQNKHIYT 548 (921)
Q Consensus 469 ~~~l~G~Tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YA~~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~VfT 548 (921)
+..|+|+||++||++|||||+|||++++|++++||. .+++.|||+||||++++|+|+||||||++|+..+.++.++|||
T Consensus 233 ~~~l~g~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~t 311 (667)
T PF00305_consen 233 EPQLEGLTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFT 311 (667)
T ss_dssp HHHCHCS-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-
T ss_pred hhccCCCcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeee
Confidence 999999999999999999999999999999999997 7889999999999999999999999998886544456789999
Q ss_pred CCCCCCChhHHHHHHHHHhhhhhhhHHHHHHHhhhcchhhHHHHHHhccCCCcCchhhhccccchhhccchHHHhhcccc
Q 002436 549 HGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLIN 628 (921)
Q Consensus 549 P~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~ 628 (921)
|+++++.+|.|+||||||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||+
T Consensus 312 P~~d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~ 391 (667)
T PF00305_consen 312 PSDDGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLIN 391 (667)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTSS
T ss_pred cCCCCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhhc
Confidence 99655667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCchhHHHHHHHHHhccccCCccCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHH
Q 002436 629 GGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVES 708 (921)
Q Consensus 629 ~gGiie~~f~~G~~~~elss~~Yk~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdYpYrdDGL~IW~AI~~~V~~ 708 (921)
+||+||++|++|+++|+|++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++||++
T Consensus 392 ~gG~id~~~~~g~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~ 470 (667)
T PF00305_consen 392 AGGIIDKTFSPGKYGMELSSRAYKN-WRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSD 470 (667)
T ss_dssp TTSHHHHHSTTTTTHHHHHHHHHTT---GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhHHHHHHHHHHhh-CCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HcccccCcccccCCChHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheecccccccccccCCcccccccCCc
Q 002436 709 YVAHFYSEPNSVTSDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIITIMIWTASGQHAAINFGQYPFGGYVPNR 788 (921)
Q Consensus 709 yv~~YY~sD~~V~~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT~IIf~aSaqHAAVNfgQy~y~gfvPN~ 788 (921)
||++||++|++|++|.|||+||+||+++||+|+++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+
T Consensus 471 ~v~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~ 550 (667)
T PF00305_consen 471 YVNLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNR 550 (667)
T ss_dssp HHHHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS
T ss_pred hhhhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCC
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCChh--hhhhccCchhHHhhcCCChHHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCHHHHHHHH
Q 002436 789 PTLMRKLVPQENDPG--YEKFLLNPQHTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNQLHSHWINDPEVLNMFD 866 (921)
Q Consensus 789 P~~lr~p~P~~g~~e--~~~l~~~pe~~~L~tLP~~~qa~~~m~~~~lLS~h~~de~yLG~~~~~~~~~~~d~~~~~A~~ 866 (921)
|++||+++|.+++.+ |++|+++||+++|++||++.||+.+|+++++||+|++||+|||+|++ +.|++|+++++|++
T Consensus 551 P~~~r~~~P~~~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~--~~w~~d~~~~~a~~ 628 (667)
T PF00305_consen 551 PTALRRPMPPPTTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPE--PHWFSDPEAKAAFE 628 (667)
T ss_dssp -S-BSSSS--TSSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SS--TTSSSSHHHHHHHH
T ss_pred ChhhcccCCCCCcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCc--ccccccHHHHHHHH
Confidence 999999999887766 99999999999999999999999999999999999999999999987 78999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccCCCCCCceeecCC
Q 002436 867 KFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPS 905 (921)
Q Consensus 867 ~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~Ps 905 (921)
+|+++|++||++|++||+++++|||+|||++||+||+||
T Consensus 629 ~F~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 629 RFQEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 999999999999999999999999999999999999996
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=100.00 E-value=1e-41 Score=332.08 Aligned_cols=135 Identities=36% Similarity=0.693 Sum_probs=128.0
Q ss_pred EEEEEEEEEEecccccccccchhhhhhhhhhcCCcEEEEEeecccCCCCCCC-ccccccccccccCCCCCCCcceEEEEE
Q 002436 83 VDVRAVITIRKKLKEKLTEKIEDQWELFVNGIGQGIMIQLISEDIDPVTNSG-KSVESAVRGWLPKPVTSSNVNIFQYEA 161 (921)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (921)
++|||+|+||+|++++++++. +.+|+++|++||+|+|||||+++||+||+| ++++++|++|.++. +++ ++|++
T Consensus 1 ~~vka~V~v~~k~~~~~~~~~-~~~D~~~~llGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~---~~e--~~y~~ 74 (137)
T cd01751 1 VKVKATVTVMKKNKLDLNDDG-SGLDDLDDLLGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL---AGE--SAYEA 74 (137)
T ss_pred CEEEEEEEEEEeecccccccc-chhhhHHHhhCCeEEEEEEEeeecCCCCCcccccceeeecccccC---Ccc--eEEEE
Confidence 379999999999999999887 999999999999999999999999999988 99999999998542 667 69999
Q ss_pred EEeecCCCCCceEEEEEecCCCceeEeEEEEeecCC-CeEEEeecccccCCCCCCCCeEEeec
Q 002436 162 NFGVPSDFGNPGAILITNLHGKEFYLLEIVVHGFDG-GPVFFPANTWIHSRKDNAESRIIFKN 223 (921)
Q Consensus 162 ~f~~~~~fG~pgAi~v~n~h~~e~fl~~i~l~~~~~-~~v~F~CnsWV~~~~~~~~~rifF~n 223 (921)
+|+||++||+||||+|+|+|++||||++|+|+++|+ |+|||+|||||||+++|+++||||+|
T Consensus 75 ~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 75 EFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred EEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 999999999999999999999999999999999996 99999999999999999999999998
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.14 E-value=2.6e-10 Score=106.12 Aligned_cols=84 Identities=30% Similarity=0.522 Sum_probs=65.5
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccCCCCCCCcceEEEEEEEeecCCCCCceEEEEEecC-CCceeEeEEEEeec
Q 002436 117 GIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLH-GKEFYLLEIVVHGF 195 (921)
Q Consensus 117 ~v~lqLvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fG~pgAi~v~n~h-~~e~fl~~i~l~~~ 195 (921)
+|.|+|++++.+ +| .+....++.|. ...+ ..|+..|+++.++|.+++|.|.|.+ +.+|||++|+|++.
T Consensus 20 ~V~l~L~g~~~~--s~--~~~~~~~~~~~----f~~g---~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~ 88 (105)
T smart00308 20 SVSLSLVGAEGD--GK--ESKLDYLFKGI----FARG---STYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDL 88 (105)
T ss_pred eEEEEEEeCCCC--Cc--ceeccccCCcc----ccCC---ceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEEC
Confidence 699999998765 22 22233444442 2233 3688889999999999999999999 89999999999987
Q ss_pred C-CCeEEEeecccccCC
Q 002436 196 D-GGPVFFPANTWIHSR 211 (921)
Q Consensus 196 ~-~~~v~F~CnsWV~~~ 211 (921)
+ ++.++|+||+||++.
T Consensus 89 ~~~~~~~F~c~~Wl~~~ 105 (105)
T smart00308 89 PTGGKYHFPCNSWVYPD 105 (105)
T ss_pred CCCCEEEEEcCceeCCC
Confidence 6 578999999999863
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.67 E-value=5.9e-08 Score=90.66 Aligned_cols=64 Identities=28% Similarity=0.476 Sum_probs=57.5
Q ss_pred EEEEEEeecCCCCCceEEEEEec---CCCceeEeEEEEeecC-CCeEEEeecccccCCCCCCCCeEEe
Q 002436 158 QYEANFGVPSDFGNPGAILITNL---HGKEFYLLEIVVHGFD-GGPVFFPANTWIHSRKDNAESRIIF 221 (921)
Q Consensus 158 ~~~~~f~~~~~fG~pgAi~v~n~---h~~e~fl~~i~l~~~~-~~~v~F~CnsWV~~~~~~~~~rifF 221 (921)
..+..|+.+.++|.|.+|.|.+. +...|||++|+|...+ +....|+||+||....+++.+||||
T Consensus 46 ~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 46 TDTFTIETPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEEEESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred eEEeeeeecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 55566667889999999999998 7999999999998866 5789999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.54 E-value=6.7e-07 Score=84.65 Aligned_cols=64 Identities=17% Similarity=0.253 Sum_probs=55.7
Q ss_pred EEEEEEeecCCCCCceEEEEEecCCC---ceeEeEEEEeecC-CCeEEEeecccccCCCCCCCCeEEe
Q 002436 158 QYEANFGVPSDFGNPGAILITNLHGK---EFYLLEIVVHGFD-GGPVFFPANTWIHSRKDNAESRIIF 221 (921)
Q Consensus 158 ~~~~~f~~~~~fG~pgAi~v~n~h~~---e~fl~~i~l~~~~-~~~v~F~CnsWV~~~~~~~~~rifF 221 (921)
.++..|+++.++|.+.+|.|.+.+.. +|||++|+|.+.. +...+|+||+||.....++..|+|.
T Consensus 49 ~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~~ 116 (116)
T cd00113 49 TDTFQIDLKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSLK 116 (116)
T ss_pred ceEEEEeccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeecC
Confidence 45556777889999999999998865 9999999998877 4789999999999998898888873
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=97.82 E-value=9.9e-05 Score=70.62 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=54.7
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccCCCCCCCcceEEEEEEEeecCCCCCceEEEEEecC-CCceeEeEEEEeec
Q 002436 117 GIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLH-GKEFYLLEIVVHGF 195 (921)
Q Consensus 117 ~v~lqLvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fG~pgAi~v~n~h-~~e~fl~~i~l~~~ 195 (921)
+|.|+||-++- .++. ..|.+ ....+.+ ..|.+ . ++++|.+-.|.|.|.. .+.|||++|+|++.
T Consensus 20 ~V~i~L~G~~g--~S~~-----~~L~~-----~F~~G~~-d~F~v--~-~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~~ 83 (109)
T cd02899 20 TIEITLLGSSG--RSNP-----KTLSQ-----GFYPGSL-KRIRF--R-AADVGDINAIILSNTALNDPWYCDYVRIKSE 83 (109)
T ss_pred eEEEEEEECCC--CcCC-----EEccC-----ccCCCce-EEEEE--C-ccccCceEEEEEECCCCCCCceeeEEEEECC
Confidence 58899996642 2232 22221 1222321 35654 4 7999999999998876 77899999999883
Q ss_pred CCCeEEEeecccccCC
Q 002436 196 DGGPVFFPANTWIHSR 211 (921)
Q Consensus 196 ~~~~v~F~CnsWV~~~ 211 (921)
.+...+||||+|+..-
T Consensus 84 ~g~~~~Fpc~rWla~~ 99 (109)
T cd02899 84 DGKVFAFNVKRWIGYP 99 (109)
T ss_pred CCCEEEEEcceeeCCc
Confidence 3677889999999643
No 10
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.50 E-value=0.00073 Score=64.86 Aligned_cols=53 Identities=25% Similarity=0.385 Sum_probs=43.9
Q ss_pred EEEEEeecCCCCCceEEEEEecC---CCceeEeEEEEeecCCCeEEEeecccccCC
Q 002436 159 YEANFGVPSDFGNPGAILITNLH---GKEFYLLEIVVHGFDGGPVFFPANTWIHSR 211 (921)
Q Consensus 159 ~~~~f~~~~~fG~pgAi~v~n~h---~~e~fl~~i~l~~~~~~~v~F~CnsWV~~~ 211 (921)
.+..+.++.++|.+-.|.|...+ ...|||+.|+|++..+...+|+||+|+...
T Consensus 50 d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~~~~~~~~F~c~rWl~~~ 105 (113)
T cd01753 50 DEYKVKVPEDLGELLLVRLRKRKYLLFDAWFCNYITVTGPGGDEYHFPCYRWIEGY 105 (113)
T ss_pred eEEEEecccCCCCcEEEEEEECCCCCCCCeeecEEEEEcCCCCEEEEEhHHeECCC
Confidence 33445567899999999999875 779999999998766677889999999765
No 11
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.33 E-value=0.0023 Score=61.68 Aligned_cols=95 Identities=18% Similarity=0.315 Sum_probs=61.1
Q ss_pred CcEEEEEeecccCCCCCCCccccccccccccCCCCCCCcceEEEEEEEeecCCCCCceEEEEEecC---CCceeEeEEEE
Q 002436 116 QGIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLH---GKEFYLLEIVV 192 (921)
Q Consensus 116 ~~v~lqLvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fG~pgAi~v~n~h---~~e~fl~~i~l 192 (921)
-+|.++|+-+.- .+..-.|..+........+.+ ..|.++ . .++|.+-.|.|.... ...|||+.|+|
T Consensus 19 a~V~i~L~G~~g-------~s~~~~L~~~~~~~~FerGs~-d~F~i~--~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V 87 (120)
T cd01756 19 ANVFITLYGENG-------DTGKRKLKKSNNKNKFERGQT-DKFTVE--A-VDLGKLKKIRIGHDNSGLGAGWFLDKVEI 87 (120)
T ss_pred cEEEEEEEeCCC-------ccccEEccCCCcCCcccCCCe-EEEEEE--e-cCCCCeEEEEEEECCCCCCCCcEEeEEEE
Confidence 348888875331 122344554311122333331 356555 4 799999999999766 46899999999
Q ss_pred eecC-CCeEEEeecccccCCCC-CCCCeEEe
Q 002436 193 HGFD-GGPVFFPANTWIHSRKD-NAESRIIF 221 (921)
Q Consensus 193 ~~~~-~~~v~F~CnsWV~~~~~-~~~~rifF 221 (921)
.+.. +...+|+||+|+...+. ..-.|++.
T Consensus 88 ~~~~~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 88 REPGTGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred EECCCceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 8766 56788999999987643 22245554
No 12
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=96.94 E-value=0.0062 Score=58.81 Aligned_cols=85 Identities=18% Similarity=0.323 Sum_probs=56.7
Q ss_pred cEEEEEeecccCCCCCCCccccccccccccCCCCCCCcceEEEEEEEeecCCCCCceEEEEEecC---CCceeEeEEEEe
Q 002436 117 GIMIQLISEDIDPVTNSGKSVESAVRGWLPKPVTSSNVNIFQYEANFGVPSDFGNPGAILITNLH---GKEFYLLEIVVH 193 (921)
Q Consensus 117 ~v~lqLvS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fG~pgAi~v~n~h---~~e~fl~~i~l~ 193 (921)
+|.|+|+.+.-+ ++ +-.|.+... .....+. .++..+..+.+.|.+-.|.|.... ...|||++|+|.
T Consensus 20 ~V~i~L~G~~g~--s~-----~~~L~~~~~-~~F~rG~---~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~ 88 (120)
T cd01752 20 KVTITLYGAEGE--SE-----PHHLRDPEK-PIFERGS---VDSFLLTTPFPLGELQSIRLWHDNSGLSPSWYLSRVIVR 88 (120)
T ss_pred EEEEEEEeCCCC--cc-----cEEcCCCCc-cceeCCC---eeEEEecCccCCCCccEEEEEECCCCCCCCeEEEEEEEE
Confidence 588888865532 11 122332111 1233333 355555667899999999997554 679999999998
Q ss_pred ecC-CCeEEEeecccccCCC
Q 002436 194 GFD-GGPVFFPANTWIHSRK 212 (921)
Q Consensus 194 ~~~-~~~v~F~CnsWV~~~~ 212 (921)
+.. +...+|+||+|+...+
T Consensus 89 ~~~t~~~~~F~~~rWl~~~~ 108 (120)
T cd01752 89 DLQTGKKWFFLCNDWLSVEE 108 (120)
T ss_pred ECCCCcEEEEEeCcEECCcC
Confidence 765 5678899999998764
No 13
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=96.87 E-value=0.0033 Score=60.73 Aligned_cols=54 Identities=19% Similarity=0.335 Sum_probs=43.4
Q ss_pred EEEEEeecCCCCCceEEEEEecC---CCceeEeEEEEeecC-CCeEEEeecccccCCCC
Q 002436 159 YEANFGVPSDFGNPGAILITNLH---GKEFYLLEIVVHGFD-GGPVFFPANTWIHSRKD 213 (921)
Q Consensus 159 ~~~~f~~~~~fG~pgAi~v~n~h---~~e~fl~~i~l~~~~-~~~v~F~CnsWV~~~~~ 213 (921)
|++.++. .++|..-.|.|...+ ...|||+.|.|++.+ +...+||||+|+...+.
T Consensus 43 f~~~v~~-~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 43 LEMTFDC-QNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred eEEEEec-CCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 4434433 999999999998765 779999999999877 56789999999977643
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=96.09 E-value=0.015 Score=57.48 Aligned_cols=53 Identities=13% Similarity=0.216 Sum_probs=42.2
Q ss_pred EEEEEEeecCCCCCceEEEEEecC---CCceeEeEEEEeecCC----CeEEEeecccccCCC
Q 002436 158 QYEANFGVPSDFGNPGAILITNLH---GKEFYLLEIVVHGFDG----GPVFFPANTWIHSRK 212 (921)
Q Consensus 158 ~~~~~f~~~~~fG~pgAi~v~n~h---~~e~fl~~i~l~~~~~----~~v~F~CnsWV~~~~ 212 (921)
.|.++ .+..+|.+-.|.|.... ...|||.+|+|.+... ...+|+||+|+...+
T Consensus 59 ~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~ 118 (129)
T cd01754 59 RFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDE 118 (129)
T ss_pred EEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCC
Confidence 56544 56789999999998654 7799999999987642 378999999997654
No 15
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=27.22 E-value=1.8e+02 Score=34.75 Aligned_cols=115 Identities=24% Similarity=0.353 Sum_probs=77.1
Q ss_pred hHHHHHHhccCCCcCchhhhccccchhhccchHHH--------------hhccccCCccccccccCchhHHHH--HHHHH
Q 002436 588 EPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALA--------------RQSLINGGGIIEASFSPGRYAMEL--SSAAY 651 (921)
Q Consensus 588 EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lA--------------R~~LI~~gGiie~~f~~G~~~~el--ss~~Y 651 (921)
+-+.+|..+|=|..-=+..+|.|--..++.||..= -..=|.+=|++.-.-.|+.|.-|| ++.-|
T Consensus 91 ~~L~~A~q~qKPds~elad~LkPI~e~i~eI~~fkE~nRkS~~FNhLsav~e~i~algWVav~~tP~p~vke~~daa~FY 170 (480)
T KOG2675|consen 91 AFLWVASQKQKPDSNELADLLKPINEEIGEINNFKEKNRKSPFFNHLSAVSESIPALGWVAVKPTPAPYVKEFKDAAQFY 170 (480)
T ss_pred HHHHHHHhccCCChHHHHHHhhhHHHhhhHHhhhhhcccCchHHHHHHHHHhhcccceeEecCCCCchHHHHHHHHHHHH
Confidence 45677888888888889999999999999998742 223345557776666677776555 33334
Q ss_pred hccccCCccCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHHHcccccCcccccCCChHHHHHHH
Q 002436 652 KSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIKEWVESYVAHFYSEPNSVTSDVELQAWWS 731 (921)
Q Consensus 652 k~~w~F~~~~lP~DL~~RGva~~D~~~p~gl~l~lpdYpYrdDGL~IW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~ 731 (921)
.+ .- |..|.=-|+ .-+ +||+.|+++| .|||++++
T Consensus 171 ~N----------rv--------------------LkEyk~~D~-~hv-----eWvKa~l~l~----------~eL~~YVk 204 (480)
T KOG2675|consen 171 TN----------RV--------------------LKEYKEKDP-RHV-----EWVKAYLALF----------LELQAYVK 204 (480)
T ss_pred HH----------HH--------------------HHHhccCCh-hHH-----HHHHHHHHHH----------HHHHHHHH
Confidence 33 11 222222221 111 6999999999 78999999
Q ss_pred HHHhccCCCCCCCCCCC
Q 002436 732 EIKNKGHHDKRNEAWWP 748 (921)
Q Consensus 732 Ei~~~G~~d~kd~p~~P 748 (921)
|-.+-|....++-+-.|
T Consensus 205 ~hhtTGl~W~~~g~~~~ 221 (480)
T KOG2675|consen 205 EHHTTGLVWNKDGGAAP 221 (480)
T ss_pred HhccccceecCCCCccc
Confidence 99998887766643334
No 16
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=24.70 E-value=47 Score=36.18 Aligned_cols=24 Identities=33% Similarity=0.864 Sum_probs=20.3
Q ss_pred HHHHHHHcccccCcccccCCChHHHHHHHH
Q 002436 703 KEWVESYVAHFYSEPNSVTSDVELQAWWSE 732 (921)
Q Consensus 703 ~~~V~~yv~~YY~sD~~V~~D~ELQaW~~E 732 (921)
.+||..||..|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 479999999999 345799999986
No 17
>TIGR03124 ctirate_citX holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.
Probab=24.11 E-value=35 Score=35.39 Aligned_cols=28 Identities=43% Similarity=0.809 Sum_probs=19.7
Q ss_pred eeeecccccCCCCCCCCCCCccccCCCCCCCCCCCCC
Q 002436 259 RIYDYAVYNDLGNPDKDKDLARPVLSGEERPYPRRCR 295 (921)
Q Consensus 259 riYdyd~yndlG~pd~~~~~~rpvlgg~~~pyPRR~r 295 (921)
|.+|-|||+.-| ..+.|--|| +| ||||=
T Consensus 107 RL~DlDV~~~~g-----~~iSR~~lg---~~-~R~Cl 134 (165)
T TIGR03124 107 RLWDIDVLDADG-----KSLSRTDLG---LP-PRKCL 134 (165)
T ss_pred hheeheeecCCC-----CCcCHHHcC---CC-CCeee
Confidence 899999997433 345676666 34 88884
No 18
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=22.47 E-value=3.8e+02 Score=26.12 Aligned_cols=49 Identities=12% Similarity=0.006 Sum_probs=38.4
Q ss_pred EEEEEEeecCCCCCceEEEEEecC----------CCceeEeEEEEeecCCCeEEEeecc
Q 002436 158 QYEANFGVPSDFGNPGAILITNLH----------GKEFYLLEIVVHGFDGGPVFFPANT 206 (921)
Q Consensus 158 ~~~~~f~~~~~fG~pgAi~v~n~h----------~~e~fl~~i~l~~~~~~~v~F~Cns 206 (921)
.|+.-+..|.++|..-.|.+.=.. ...||++.|+|++.+.+.-...|.+
T Consensus 47 ~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 47 TYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred EEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 677777788888888887776222 4589999999998887777778877
No 19
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=20.19 E-value=1.5e+02 Score=23.18 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=20.7
Q ss_pred CChHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHh
Q 002436 722 SDVELQAWWSEIKNKGHHDKRNEAWWPKLETKEDLSGIIT 761 (921)
Q Consensus 722 ~D~ELQaW~~Ei~~~G~~d~kd~p~~P~i~T~~eLv~~lT 761 (921)
.|.+|+.|..+ ||-... +...|+++|++.+-
T Consensus 5 s~~~L~~wL~~-----~gi~~~----~~~~~rd~Ll~~~k 35 (38)
T PF10281_consen 5 SDSDLKSWLKS-----HGIPVP----KSAKTRDELLKLAK 35 (38)
T ss_pred CHHHHHHHHHH-----cCCCCC----CCCCCHHHHHHHHH
Confidence 46899999987 432221 12369999998763
Done!