Your job contains 1 sequence.
>002437
MKPLLSLHHAPTRVPAPRFLSDPYFPIPRFKPPPHRTHFPIKSISNDNSFRSEDSAAAPV
ISEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNG
GEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKD
SMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI
MNASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSNVKL
LDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQ
IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH
PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE
VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST
LEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPI
RIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDST
KSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTM
WLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSK
MFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQ
RVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDE
LSNVQEKIQTLQVEIQNLHVS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002437
(921 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2007579 - symbol:FZL "FZO-like" species:3702 "... 2547 9.3e-265 1
DICTYBASE|DDB_G0287331 - symbol:DDB_G0287331 "dynamin dom... 475 1.3e-44 2
UNIPROTKB|Q3AAB0 - symbol:CHY_2105 "Putative uncharacteri... 190 5.0e-19 3
TIGR_CMR|CHY_2105 - symbol:CHY_2105 "conserved hypothetic... 190 5.0e-19 3
UNIPROTKB|Q609N9 - symbol:MCA1193 "Putative uncharacteriz... 171 6.3e-14 3
UNIPROTKB|Q5HW56 - symbol:CJE0460 "GTP-binding protein" s... 130 7.5e-08 2
TIGR_CMR|CJE_0460 - symbol:CJE_0460 "GTP-binding protein"... 130 7.5e-08 2
TIGR_CMR|GSU_0587 - symbol:GSU_0587 "thiamine-phosphate p... 135 2.3e-06 1
UNIPROTKB|Q81SQ1 - symbol:BAS1479 "Uncharacterized protei... 140 8.7e-05 2
TIGR_CMR|BA_1595 - symbol:BA_1595 "conserved hypothetical... 140 8.7e-05 2
TIGR_CMR|GSU_3465 - symbol:GSU_3465 "tRNA modification GT... 100 0.00014 2
CGD|CAL0004518 - symbol:FZO1 species:5476 "Candida albica... 84 0.00041 4
UNIPROTKB|Q60A52 - symbol:MCA1019 "Putative uncharacteriz... 90 0.00053 2
UNIPROTKB|Q5HW55 - symbol:CJE0461 "GTP-binding protein" s... 108 0.00090 4
TIGR_CMR|CJE_0461 - symbol:CJE_0461 "GTP-binding protein"... 108 0.00090 4
UNIPROTKB|Q8IWA4 - symbol:MFN1 "Mitofusin-1" species:9606... 99 0.00091 3
>TAIR|locus:2007579 [details] [associations]
symbol:FZL "FZO-like" species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0004789
"thiamine-phosphate diphosphorylase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0009228 "thiamine
biosynthetic process" evidence=IEA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA;IMP] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA;IMP]
[GO:0031969 "chloroplast membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0015979 "photosynthesis" evidence=RCA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0048481 "ovule
development" evidence=RCA] InterPro:IPR003733 InterPro:IPR006073
InterPro:IPR013785 Pfam:PF01926 Pfam:PF02581 GO:GO:0005525
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:3.20.20.70
GO:GO:0031969 GO:GO:0010027 GO:GO:0010228 GO:GO:0009228
eggNOG:COG0699 GO:GO:0004789 EMBL:DQ462573 IPI:IPI00522189
RefSeq:NP_171815.3 UniGene:At.44048 ProteinModelPortal:Q1KPV0
SMR:Q1KPV0 PaxDb:Q1KPV0 PRIDE:Q1KPV0 EnsemblPlants:AT1G03160.1
GeneID:839566 KEGG:ath:AT1G03160 TAIR:At1g03160
HOGENOM:HOG000241410 InParanoid:Q1KPV0 OMA:VPTTNEI PhylomeDB:Q1KPV0
ProtClustDB:CLSN2695579 Genevestigator:Q1KPV0 Uniprot:Q1KPV0
Length = 912
Score = 2547 (901.6 bits), Expect = 9.3e-265, P = 9.3e-265
Identities = 518/859 (60%), Positives = 656/859 (76%)
Query: 67 RPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGG--DALDLIDEAVAKFVGIVVLNGGEAS 124
RPRTLYPGGYKRPE+ VP ++L+L+ +V++G + LDL+D A+AK V IVV++GG +
Sbjct: 62 RPRTLYPGGYKRPELAVPGLLLRLDADEVMSGNREETLDLVDRALAKSVQIVVIDGGATA 121
Query: 125 GKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSE 184
GK +YEAACLLKS+VK RA LIAERVDIA+AV ASGV LSD+GLPAIVARNT+ S +
Sbjct: 122 GK-LYEAACLLKSLVKGRAYLLIAERVDIASAVGASGVALSDEGLPAIVARNTLMGSNPD 180
Query: 185 SVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIM--N 242
SV+LPLV R V+ +D+A ASSSEGADFL+ G G++ + +SL +VKIPI++
Sbjct: 181 SVLLPLVARIVKDVDSALIASSSEGADFLI--LGSGEEDTQVADSLLKSVKIPIYVTCRG 238
Query: 243 ASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSNVKLLD 302
+ + LKSG SGFVISL+DL D L Q N + N+
Sbjct: 239 NEEAKEELQLLKSGVSGFVISLKDLRSSRDVALRQSLDGAYVVNN-----HETQNM---- 289
Query: 303 TSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQID 362
N K+ AGF+K ED++K ++E E+SVL E I++I KA+PLMEEVSLLIDAVS+ID
Sbjct: 290 --NELPEKKNSAGFIKLEDKQKLIVEMEKSVLRETIEIIHKAAPLMEEVSLLIDAVSRID 347
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPD 422
EPFL+VIVGE+NSGKS+VINALLGKRYLK+GVVPTTNEITFL +SDL SEEQQRC+ HPD
Sbjct: 348 EPFLMVIVGEFNSGKSTVINALLGKRYLKEGVVPTTNEITFLCYSDLESEEQQRCQTHPD 407
Query: 423 GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
GQY+CYLP+PILK++ IVDTPGTNVILQRQQRLTEEFVPRADL++FV+SADRPLTESEV
Sbjct: 408 GQYVCYLPAPILKDINIVDTPGTNVILQRQQRLTEEFVPRADLLVFVLSADRPLTESEVA 467
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLE 542
FLRYTQQWKKK VF+LNKSD+Y++A ELEEAISFVKENT KLLN ENV +YPVSARS LE
Sbjct: 468 FLRYTQQWKKKFVFILNKSDIYRDARELEEAISFVKENTRKLLNTENVILYPVSARSALE 527
Query: 543 AKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRI 602
AKLS +S VG+D E++ S+WR+ +F++LEK LYSFLD S++TG ER+RLKLETP+ I
Sbjct: 528 AKLSTASLVGRDDLEIADPGSNWRVQSFNELEKFLYSFLDSSTATGMERIRLKLETPMAI 587
Query: 603 AERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKS 662
AERLLSS E LV +DC A++DL A+++I KEY +KME ESISWRR+ LSLID+ +
Sbjct: 588 AERLLSSVEALVRQDCLAAREDLASADKIISRTKEYALKMEYESISWRRQALSLIDNARL 647
Query: 663 RVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWL 722
+VV LI +TL++S+LD+ SYVF+GEKSA++ +TS++Q +I+ PAL + ++LLG+Y WL
Sbjct: 648 QVVDLIGTTLRLSSLDLAISYVFKGEKSASVAATSKVQGEILAPALTNAKELLGKYAEWL 707
Query: 723 QSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMF 782
QS AREG +SFEN+WP+ V + Q+ D Y+L++K D S + I++ SA +TSK
Sbjct: 708 QSNTAREGSLSLKSFENKWPTYVNSKTQLGIDTYDLLQKTDKVSLKTIQNLSAGTTSKRL 767
Query: 783 EQEIREVXXXXXXXXXXXXXXXXXXXXVLPTTLEDLLALGLCSAGGYIAVANFPARRQRV 842
EQ+IREV VLPTTLEDLLALGLCSAGGY+A+ANFP RRQ +
Sbjct: 768 EQDIREVFFVTVGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYVAIANFPYRRQAI 827
Query: 843 IEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELS 902
I KVNK+AD LA+++E+AMQKDL + +L NFV V KPY++ AQL+LDRL IQ ELS
Sbjct: 828 IGKVNKVADALAQQLEDAMQKDLSDATSNLVNFVNIVAKPYREEAQLRLDRLLGIQKELS 887
Query: 903 NVQEKIQTLQVEIQNLHVS 921
+++ K+Q LQV+I NLHVS
Sbjct: 888 DIRSKLQLLQVDIDNLHVS 906
>DICTYBASE|DDB_G0287331 [details] [associations]
symbol:DDB_G0287331 "dynamin domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926
dictyBase:DDB_G0287331 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AAFI02000100 eggNOG:COG0699 RefSeq:XP_637242.1
ProteinModelPortal:Q54KI1 EnsemblProtists:DDB0187425 GeneID:8626073
KEGG:ddi:DDB_G0287331 InParanoid:Q54KI1 OMA:FENINLA
ProtClustDB:CLSZ2728868 Uniprot:Q54KI1
Length = 711
Score = 475 (172.3 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 106/279 (37%), Positives = 165/279 (59%)
Query: 302 DTSNSFFGKE--RVAGFVKFEDREKQLIETERS--VLLEAIDVIKKASPLMEEVSLLIDA 357
+T+ F +E + + + +K L E++ ++ E SPL + D+
Sbjct: 52 NTNTQFVNEEFNKARKMIAKDLHKKTLASMEKAYGIMTEYDRTTYNKSPLASSLGSFKDS 111
Query: 358 VSQI-DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQR 416
+ Q+ D FLLV+VGE+NSGKSS +NALLG RYLK+G+ PTT+ I + F + S+
Sbjct: 112 IDQLKDNSFLLVVVGEFNSGKSSFLNALLGDRYLKEGITPTTHRINRIEFGETISQHTIP 171
Query: 417 CERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPL 476
I LP LKE +VDTPGTN +++ Q +TE F+P++DLVLFV S DR
Sbjct: 172 SRLSNTEHEIIQLPVEWLKEFSLVDTPGTNAVIEGHQEITEHFIPKSDLVLFVTSIDRAF 231
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSDLYQN-------AFELEEAISFVKENTMKLLNIEN 529
+ESE +FL ++W KK+V +++K+DL +N EL E I+FVK+N LN+E
Sbjct: 232 SESEKIFLEKVKKWGKKIVVIISKTDLIENNPLSSNAQSELNEVINFVKDNFKSQLNVEP 291
Query: 530 VTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRIN 568
+ I+P+S++ L+AKL +SS++ ++ L+ N++ IN
Sbjct: 292 M-IFPLSSKLALKAKLELSSSINNLNNNLNNNNNSSNIN 329
Score = 62 (26.9 bits), Expect = 1.3e-44, Sum P(2) = 1.3e-44
Identities = 21/108 (19%), Positives = 50/108 (46%)
Query: 810 VLPTTLEDLLA-LGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQET 868
+L T DL LG+ A +A P ++ ++ ++ L ++ + +Q + E
Sbjct: 601 ILSTAFFDLTGVLGI-GALAITGLAWVPFKKAQLKRSISSKITNLRLQLHDTIQDHIGEE 659
Query: 869 VGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQ 916
+ N + +PY D + +++++ +L +++ QTL +I+
Sbjct: 660 IRISSNKIQLGIQPYIDFTNNESKKINDLSIKLGECKDERQTLIYDIE 707
>UNIPROTKB|Q3AAB0 [details] [associations]
symbol:CHY_2105 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006184
eggNOG:COG0699 RefSeq:YP_360924.1 ProteinModelPortal:Q3AAB0
STRING:Q3AAB0 GeneID:3726768 KEGG:chy:CHY_2105 PATRIC:21277287
HOGENOM:HOG000126980 OMA:ATGEMFR ProtClustDB:CLSK941207
BioCyc:CHYD246194:GJCN-2104-MONOMER Uniprot:Q3AAB0
Length = 599
Score = 190 (71.9 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 64/248 (25%), Positives = 126/248 (50%)
Query: 428 YLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
+ PS +L K ++++DTPG + T F+P+ D LF++SAD P+TE EV FL+
Sbjct: 150 FYPSLLLQKGVVLIDTPGIGSTFRHNTETTLNFLPQCDAALFLVSADPPITEVEVEFLKA 209
Query: 487 TQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVT-IYPVSARSTLEAKL 545
+ + F+LNK D Y E+ ++F+K + + IE ++ VSAR LEA+
Sbjct: 210 VRTKVAHLFFILNKVD-YLKKEEIAALVTFIKNVLREQVGIEGEPPLFCVSARLGLEARK 268
Query: 546 SVSSAVGKDHSELSVNDSHWRINTFDKLEK-LLYSFLDGSSSTGKERMRLKLETPIRIAE 604
+ + S L H+ I+ + +K +L + L ++ + ++L+ +R E
Sbjct: 269 RDDPELW-EQSGLD-EVWHYLIDFLAREKKNVLQTALAKKATDVIADVLMRLQLTLRSLE 326
Query: 605 RLLSSCE---TLVMKDCQDA-KQDLTLANEMIDSLKEYVMKMESESISWRRKTLS-LIDS 659
L+ + + + Q+A +Q + L + ++ K + +E ++ S R+K + L++
Sbjct: 327 MPLAELDERLNIFEQKIQEANRQRIFLGDLLVGDRKRMLEFLEQQAESLRQKARAYLLEI 386
Query: 660 TKSRVVKL 667
+S + ++
Sbjct: 387 VRSNLEQM 394
Score = 104 (41.7 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 328 ETERSVL-LEAIDVIKKASPLMEEVSLLIDAVSQ--IDEPFLLVIVGEYNSGKSSVINAL 384
+TE ++L L+ +++++ P E I + + ++E F L ++G++ GKS+ INAL
Sbjct: 16 DTEMNILFLKTLEILQSLGPEFSENLQKIRGLQERFLNERFHLAVLGQFKRGKSTFINAL 75
Query: 385 LGKRYLKDGVVPTTNEITFL 404
LG L V+P T FL
Sbjct: 76 LGDDLLPTAVLPLTAVPIFL 95
Score = 64 (27.6 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 844 EKVNK--IADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDEL 901
+ VN+ I LA+ I E +K+L E E VT+V +PYQ + ++ + EL
Sbjct: 396 DNVNETEIQKALAKAIPEFFEKELGEMARIFEQRVTEVLRPYQQKVEELIETGRKTAAEL 455
Query: 902 SNV 904
++
Sbjct: 456 FDI 458
Score = 59 (25.8 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 17/82 (20%), Positives = 39/82 (47%)
Query: 830 IAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQL 889
+ + N R ++ +++ +EE +Q+ + T G ++ K + Q+ AQ
Sbjct: 518 LVLTNVENLRWATLQNLDQAFRQFGLSLEERLQETILATRGAIQAAREKRLEHSQNIAQ- 576
Query: 890 KLDRLSEIQDELSNVQEKIQTL 911
++ R+ D+L ++EK Q +
Sbjct: 577 EIIRIQTFVDQLKEIKEKFQAM 598
>TIGR_CMR|CHY_2105 [details] [associations]
symbol:CHY_2105 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006184
eggNOG:COG0699 RefSeq:YP_360924.1 ProteinModelPortal:Q3AAB0
STRING:Q3AAB0 GeneID:3726768 KEGG:chy:CHY_2105 PATRIC:21277287
HOGENOM:HOG000126980 OMA:ATGEMFR ProtClustDB:CLSK941207
BioCyc:CHYD246194:GJCN-2104-MONOMER Uniprot:Q3AAB0
Length = 599
Score = 190 (71.9 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 64/248 (25%), Positives = 126/248 (50%)
Query: 428 YLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
+ PS +L K ++++DTPG + T F+P+ D LF++SAD P+TE EV FL+
Sbjct: 150 FYPSLLLQKGVVLIDTPGIGSTFRHNTETTLNFLPQCDAALFLVSADPPITEVEVEFLKA 209
Query: 487 TQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVT-IYPVSARSTLEAKL 545
+ + F+LNK D Y E+ ++F+K + + IE ++ VSAR LEA+
Sbjct: 210 VRTKVAHLFFILNKVD-YLKKEEIAALVTFIKNVLREQVGIEGEPPLFCVSARLGLEARK 268
Query: 546 SVSSAVGKDHSELSVNDSHWRINTFDKLEK-LLYSFLDGSSSTGKERMRLKLETPIRIAE 604
+ + S L H+ I+ + +K +L + L ++ + ++L+ +R E
Sbjct: 269 RDDPELW-EQSGLD-EVWHYLIDFLAREKKNVLQTALAKKATDVIADVLMRLQLTLRSLE 326
Query: 605 RLLSSCE---TLVMKDCQDA-KQDLTLANEMIDSLKEYVMKMESESISWRRKTLS-LIDS 659
L+ + + + Q+A +Q + L + ++ K + +E ++ S R+K + L++
Sbjct: 327 MPLAELDERLNIFEQKIQEANRQRIFLGDLLVGDRKRMLEFLEQQAESLRQKARAYLLEI 386
Query: 660 TKSRVVKL 667
+S + ++
Sbjct: 387 VRSNLEQM 394
Score = 104 (41.7 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 328 ETERSVL-LEAIDVIKKASPLMEEVSLLIDAVSQ--IDEPFLLVIVGEYNSGKSSVINAL 384
+TE ++L L+ +++++ P E I + + ++E F L ++G++ GKS+ INAL
Sbjct: 16 DTEMNILFLKTLEILQSLGPEFSENLQKIRGLQERFLNERFHLAVLGQFKRGKSTFINAL 75
Query: 385 LGKRYLKDGVVPTTNEITFL 404
LG L V+P T FL
Sbjct: 76 LGDDLLPTAVLPLTAVPIFL 95
Score = 64 (27.6 bits), Expect = 5.0e-19, Sum P(3) = 5.0e-19
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 844 EKVNK--IADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDEL 901
+ VN+ I LA+ I E +K+L E E VT+V +PYQ + ++ + EL
Sbjct: 396 DNVNETEIQKALAKAIPEFFEKELGEMARIFEQRVTEVLRPYQQKVEELIETGRKTAAEL 455
Query: 902 SNV 904
++
Sbjct: 456 FDI 458
Score = 59 (25.8 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 17/82 (20%), Positives = 39/82 (47%)
Query: 830 IAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQL 889
+ + N R ++ +++ +EE +Q+ + T G ++ K + Q+ AQ
Sbjct: 518 LVLTNVENLRWATLQNLDQAFRQFGLSLEERLQETILATRGAIQAAREKRLEHSQNIAQ- 576
Query: 890 KLDRLSEIQDELSNVQEKIQTL 911
++ R+ D+L ++EK Q +
Sbjct: 577 EIIRIQTFVDQLKEIKEKFQAM 598
>UNIPROTKB|Q609N9 [details] [associations]
symbol:MCA1193 "Putative uncharacterized protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 EMBL:AE017282 GenomeReviews:AE017282_GR
RefSeq:YP_113658.1 ProteinModelPortal:Q609N9 GeneID:3102791
KEGG:mca:MCA1193 PATRIC:22606216 HOGENOM:HOG000016054 OMA:GHVEIEY
ProtClustDB:CLSK931598 Uniprot:Q609N9
Length = 614
Score = 171 (65.3 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 56/178 (31%), Positives = 90/178 (50%)
Query: 430 PSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ 488
PSP+L + IVDTPG + + +P+ D LFV+SAD+ ++E+E+ FL +
Sbjct: 143 PSPLLGNGVRIVDTPGVGSVFRHNTDTAWARLPQCDAALFVLSADQAVSEAELEFLHEVR 202
Query: 489 QWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVS 548
++ ++ F+LNK D+ Q A + F + + + E V ++P+SAR L K
Sbjct: 203 KYAGRIFFLLNKIDILQEA-DTAAIEHFSRRVLAEAVGTE-VRLFPISAREALMGK---- 256
Query: 549 SAVGKDHSELSVNDSHWRINTFDK-LEKLLYS-----FLDGSSSTGKERM--RLKLET 598
G D + L + R+ F LE+ L LD ++S G R+ RL+LET
Sbjct: 257 --AGNDPARLEAS----RLPVFTAALERFLLEEKGALLLDAAAS-GLARLTGRLRLET 307
Score = 98 (39.6 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
++ LL ID + + P +L + Q F ++ VG++ GK+S+INALLG+ L
Sbjct: 22 KTELLSLIDELAERLPAALRPALALRDKLQAGH-FDVLTVGQFKRGKTSLINALLGENLL 80
Query: 391 KDGVVPTTNEITFLRF 406
VP T+ +T L +
Sbjct: 81 PTAAVPLTSVVTVLAY 96
Score = 41 (19.5 bits), Expect = 6.3e-14, Sum P(3) = 6.3e-14
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 844 EKVNKIADGLAREIEEAMQKDLQETVGHLENF 875
E + + ++ E +++ ETV L+ F
Sbjct: 413 EALEDQGEAAVAQLAETFDREIDETVAELQRF 444
>UNIPROTKB|Q5HW56 [details] [associations]
symbol:CJE0460 "GTP-binding protein" species:195099
"Campylobacter jejuni RM1221" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0699 RefSeq:YP_178479.1 ProteinModelPortal:Q5HW56
STRING:Q5HW56 GeneID:3231222 KEGG:cjr:CJE0460 PATRIC:20042620
HOGENOM:HOG000229301 OMA:NYTSAKN ProtClustDB:CLSK878772
BioCyc:CJEJ195099:GJC0-465-MONOMER Uniprot:Q5HW56
Length = 728
Score = 130 (50.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 63/273 (23%), Positives = 130/273 (47%)
Query: 434 LKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT--QQW 490
LK I IVDTPG + ++ +++ +T E++ +D ++ +++A + LT+ + FL +
Sbjct: 290 LKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLTQKDADFLVHCLLNSR 349
Query: 491 KKKVVFVLNKSDLYQNAFELEEAISFVKENTM-KLLNIENVTIYPVSARSTLEAKLSVSS 549
K + VL K+DL +LEE I + KE+ +L++++ + + L VS+
Sbjct: 350 LSKFLIVLTKADLLSKK-DLEEVIVYTKESLKSRLVDLDENLVEKIDF-------LCVSA 401
Query: 550 AVGKD-HSELSVNDSHWRINTFDKLEKLLYSFL-DGSSS-----TGKERMRLKLETPI-- 600
+ D + L+ +S + + + E L++ L G S K+ + L+L+ +
Sbjct: 402 KMASDFYKGLAPKESLQK-SGMQEFENYLFNELYAGEKSKIALRAYKKELHLELKNILSK 460
Query: 601 -RIAERLLSSCETLVMKDCQDA-----KQDLTLANEMIDSLKEYVMKMESESISWRRKTL 654
+ RL+ + V ++ Q KQ++ L E D + +++K+++ L
Sbjct: 461 YEMQNRLIKENKQGVSEENQKLLLELQKQNILL-KEAQDEISNFIVKLKNIDNGIDNLVL 519
Query: 655 SLIDSTKSRVV---KLIESTLQISNLDIVASYV 684
L K R++ K +++ Q NL + + V
Sbjct: 520 LLAKKLKERLIDEFKYLKNNAQKLNLSRILNIV 552
Score = 81 (33.6 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEE 413
F + I G N+GKSS++NALL + +L +P T +T L + SEE
Sbjct: 163 FNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGK--SEE 209
>TIGR_CMR|CJE_0460 [details] [associations]
symbol:CJE_0460 "GTP-binding protein" species:195099
"Campylobacter jejuni RM1221" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0699 RefSeq:YP_178479.1 ProteinModelPortal:Q5HW56
STRING:Q5HW56 GeneID:3231222 KEGG:cjr:CJE0460 PATRIC:20042620
HOGENOM:HOG000229301 OMA:NYTSAKN ProtClustDB:CLSK878772
BioCyc:CJEJ195099:GJC0-465-MONOMER Uniprot:Q5HW56
Length = 728
Score = 130 (50.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 63/273 (23%), Positives = 130/273 (47%)
Query: 434 LKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT--QQW 490
LK I IVDTPG + ++ +++ +T E++ +D ++ +++A + LT+ + FL +
Sbjct: 290 LKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLTQKDADFLVHCLLNSR 349
Query: 491 KKKVVFVLNKSDLYQNAFELEEAISFVKENTM-KLLNIENVTIYPVSARSTLEAKLSVSS 549
K + VL K+DL +LEE I + KE+ +L++++ + + L VS+
Sbjct: 350 LSKFLIVLTKADLLSKK-DLEEVIVYTKESLKSRLVDLDENLVEKIDF-------LCVSA 401
Query: 550 AVGKD-HSELSVNDSHWRINTFDKLEKLLYSFL-DGSSS-----TGKERMRLKLETPI-- 600
+ D + L+ +S + + + E L++ L G S K+ + L+L+ +
Sbjct: 402 KMASDFYKGLAPKESLQK-SGMQEFENYLFNELYAGEKSKIALRAYKKELHLELKNILSK 460
Query: 601 -RIAERLLSSCETLVMKDCQDA-----KQDLTLANEMIDSLKEYVMKMESESISWRRKTL 654
+ RL+ + V ++ Q KQ++ L E D + +++K+++ L
Sbjct: 461 YEMQNRLIKENKQGVSEENQKLLLELQKQNILL-KEAQDEISNFIVKLKNIDNGIDNLVL 519
Query: 655 SLIDSTKSRVV---KLIESTLQISNLDIVASYV 684
L K R++ K +++ Q NL + + V
Sbjct: 520 LLAKKLKERLIDEFKYLKNNAQKLNLSRILNIV 552
Score = 81 (33.6 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEE 413
F + I G N+GKSS++NALL + +L +P T +T L + SEE
Sbjct: 163 FNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGK--SEE 209
>TIGR_CMR|GSU_0587 [details] [associations]
symbol:GSU_0587 "thiamine-phosphate pyrophosphorylase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004789
"thiamine-phosphate diphosphorylase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
HAMAP:MF_00097 InterPro:IPR003733 InterPro:IPR013785 Pfam:PF02581
UniPathway:UPA00060 Gene3D:3.20.20.70 GO:GO:0046872 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009228 GO:GO:0009229
eggNOG:COG0352 GO:GO:0004789 InterPro:IPR022998 SUPFAM:SSF51391
TIGRFAMs:TIGR00693 HOGENOM:HOG000155781 KO:K00788
RefSeq:NP_951645.1 ProteinModelPortal:P61411 GeneID:2685827
KEGG:gsu:GSU0587 PATRIC:22023923 OMA:CIGGINE ProtClustDB:CLSK827931
BioCyc:GSUL243231:GH27-563-MONOMER Uniprot:P61411
Length = 213
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 85 NVVLQLEPHQVLAGG-DALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR- 142
++ L + HQ AGG D L +++ A+A V V L + +++ E A ++ + DR
Sbjct: 7 SLYLITDRHQ--AGGRDLLAVVEGALAGGVRCVQLREKDLPARTLLELARAMRRLT-DRF 63
Query: 143 -ALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAA 201
A LI +RVDIA A A GV L ++G+PA VAR + L+G + A
Sbjct: 64 GARLLINDRVDIALAAGADGVHLGEEGMPAAVARELLGSGR-------LIGVSCHGRGGA 116
Query: 202 FNASSSEGADFLV----------CCFGEGQKADVIENSLFTNVKIPIFIMNASPLVDVSK 251
A+ ++GADF+ +GE D + + + IP+F + ++ +
Sbjct: 117 A-AAVAQGADFITFGPVYPTPSKAAYGEPVGIDQLAATT-KEIHIPVFALGGIKEANIPE 174
Query: 252 FLKSGASGFVI 262
L +GA+G +
Sbjct: 175 ALAAGAAGVAL 185
>UNIPROTKB|Q81SQ1 [details] [associations]
symbol:BAS1479 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001401 Pfam:PF00350
GO:GO:0005525 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006184
RefSeq:NP_844044.1 RefSeq:YP_027748.1 RefSeq:YP_052622.1
ProteinModelPortal:Q81SQ1 DNASU:1086754
EnsemblBacteria:EBBACT00000008239 EnsemblBacteria:EBBACT00000018671
EnsemblBacteria:EBBACT00000019724 GeneID:1086754 GeneID:2820826
GeneID:2848676 KEGG:ban:BA_1595 KEGG:bar:GBAA_1595 KEGG:bat:BAS1479
HOGENOM:HOG000086949 OMA:VMDYNHV ProtClustDB:CLSK873104
BioCyc:BANT260799:GJAJ-1553-MONOMER
BioCyc:BANT261594:GJ7F-1618-MONOMER Uniprot:Q81SQ1
Length = 1219
Score = 140 (54.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 63/263 (23%), Positives = 121/263 (46%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A++QID+ V+ +GK + L R +
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK----VMKYPSPTGKQKTTFSFL--RAV 731
Query: 391 KDGV-VPTTN-----EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G +T+ ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 732 QKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K + +GK+ +
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQY-GIRNPRLFAISSLCALEEKQGKN--IGKEKYGI 905
Query: 559 SVNDSHWRINTFDKLEKLLYSFL 581
N KLE+ SF+
Sbjct: 906 LQNSG------IAKLEESFTSFM 922
Score = 119 (46.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 57/253 (22%), Positives = 116/253 (45%)
Query: 410 ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
A E +Q C+ + G +I +PI + +++VDTPG + Q TE + AD++
Sbjct: 108 AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLHLADVIF 167
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKENTMKLLN 526
+++ + +E + F++ +Q K V V+N+ D + +N + VK++ +
Sbjct: 168 YMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQSFSNW-D 226
Query: 527 IENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSF 580
IE +Y S R + +E ++ +++ K+ E V D R + E + SF
Sbjct: 227 IEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEYLMGEHV--SF 283
Query: 581 LDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKE--- 637
+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 284 ILSENEKALLKYEEELASPLSISE-IVEKKEGLTETKHREASKESHVRNEFIKGLQAILD 342
Query: 638 --YVMKMESESIS 648
Y+M E ++
Sbjct: 343 NAYLMPFEMRELA 355
Score = 62 (26.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDLASEEQQRCERHP 421
E ++ G +++GKS+++N L + L +PT+ N + + SD + E++
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 422 -DGQY 425
DG Y
Sbjct: 102 YDGAY 106
Score = 46 (21.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 203 NASSSEGADFLVCCFGEGQKADVIENSL 230
N + G LVC + E QK ENSL
Sbjct: 3 NIVQTNGMKKLVCFYEEWQKHGDAENSL 30
>TIGR_CMR|BA_1595 [details] [associations]
symbol:BA_1595 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 RefSeq:NP_844044.1 RefSeq:YP_027748.1
RefSeq:YP_052622.1 ProteinModelPortal:Q81SQ1 DNASU:1086754
EnsemblBacteria:EBBACT00000008239 EnsemblBacteria:EBBACT00000018671
EnsemblBacteria:EBBACT00000019724 GeneID:1086754 GeneID:2820826
GeneID:2848676 KEGG:ban:BA_1595 KEGG:bar:GBAA_1595 KEGG:bat:BAS1479
HOGENOM:HOG000086949 OMA:VMDYNHV ProtClustDB:CLSK873104
BioCyc:BANT260799:GJAJ-1553-MONOMER
BioCyc:BANT261594:GJ7F-1618-MONOMER Uniprot:Q81SQ1
Length = 1219
Score = 140 (54.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 63/263 (23%), Positives = 121/263 (46%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A++QID+ V+ +GK + L R +
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK----VMKYPSPTGKQKTTFSFL--RAV 731
Query: 391 KDGV-VPTTN-----EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G +T+ ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 732 QKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K + +GK+ +
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQY-GIRNPRLFAISSLCALEEKQGKN--IGKEKYGI 905
Query: 559 SVNDSHWRINTFDKLEKLLYSFL 581
N KLE+ SF+
Sbjct: 906 LQNSG------IAKLEESFTSFM 922
Score = 119 (46.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 57/253 (22%), Positives = 116/253 (45%)
Query: 410 ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
A E +Q C+ + G +I +PI + +++VDTPG + Q TE + AD++
Sbjct: 108 AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLHLADVIF 167
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKENTMKLLN 526
+++ + +E + F++ +Q K V V+N+ D + +N + VK++ +
Sbjct: 168 YMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQSFSNW-D 226
Query: 527 IENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSF 580
IE +Y S R + +E ++ +++ K+ E V D R + E + SF
Sbjct: 227 IEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEYLMGEHV--SF 283
Query: 581 LDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKE--- 637
+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 284 ILSENEKALLKYEEELASPLSISE-IVEKKEGLTETKHREASKESHVRNEFIKGLQAILD 342
Query: 638 --YVMKMESESIS 648
Y+M E ++
Sbjct: 343 NAYLMPFEMRELA 355
Score = 62 (26.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDLASEEQQRCERHP 421
E ++ G +++GKS+++N L + L +PT+ N + + SD + E++
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 422 -DGQY 425
DG Y
Sbjct: 102 YDGAY 106
Score = 46 (21.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 203 NASSSEGADFLVCCFGEGQKADVIENSL 230
N + G LVC + E QK ENSL
Sbjct: 3 NIVQTNGMKKLVCFYEEWQKHGDAENSL 30
>TIGR_CMR|GSU_3465 [details] [associations]
symbol:GSU_3465 "tRNA modification GTPase TrmE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:NP_954505.1 ProteinModelPortal:Q746Q3
GeneID:2686588 KEGG:gsu:GSU3465 PATRIC:22029787
BioCyc:GSUL243231:GH27-3432-MONOMER Uniprot:Q746Q3
Length = 456
Score = 100 (40.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 439 IVDTPG---TNVILQRQQ-RLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKV 494
++DT G T I++++ RLT E +P ADLVL VI RPL E + + L K++
Sbjct: 272 MIDTAGIRDTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAG--KRL 329
Query: 495 VFVLNKSDL 503
+ V NK DL
Sbjct: 330 ILVENKCDL 338
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 336 EAIDV-IKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDG 393
+A+ V ++KA+ + E+ D + E ++I G+ N GKSS++N LL KR +
Sbjct: 191 DALTVHVRKAAETVGELIAGFDEGRVLREGVAVLIAGKPNVGKSSLLNTLLQEKRAIVTS 250
Query: 394 VVPTTNEI 401
V TT +I
Sbjct: 251 VPGTTRDI 258
>CGD|CAL0004518 [details] [associations]
symbol:FZO1 species:5476 "Candida albicans" [GO:0031307
"integral to mitochondrial outer membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] InterPro:IPR001401
InterPro:IPR027091 InterPro:IPR027094 Pfam:PF00350 CGD:CAL0004518
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 eggNOG:COG0699 KO:K06030
PANTHER:PTHR10465 PANTHER:PTHR10465:SF0 EMBL:AACQ01000194
EMBL:AACQ01000193 RefSeq:XP_711529.1 RefSeq:XP_711550.1
ProteinModelPortal:Q59P94 STRING:Q59P94 GeneID:3646848
GeneID:3646869 KEGG:cal:CaO19.1422 KEGG:cal:CaO19.8998
Uniprot:Q59P94
Length = 874
Score = 84 (34.6 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 347 LMEEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR 405
L+++V L++ +ID+ V V G+ N+GKS+ NALL ++ L + P T F
Sbjct: 202 LLQQVKYLLNLKDRIDDTTSKVFVTGDLNAGKSTFCNALLRRKILPEDQQPCT--AVFCE 259
Query: 406 FSDLASEEQQRCE 418
D AS+E E
Sbjct: 260 VID-ASKENNSIE 271
Score = 82 (33.9 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 439 IVDTPGTNV-ILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
++D PG N+ Q Q + + DLV+FV+SA+ T S F+ K+ V V
Sbjct: 335 LIDAPGLNMDSYQTTQVFSRQ--EEIDLVVFVVSAENHFTLSAKEFIAAAANEKRYVFIV 392
Query: 498 LNKSDLYQNAFELEEAI-SFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHS 556
+N+ D ++ + + I +K + ++ VS+ L D
Sbjct: 393 VNRFDHIKDKEKCKRRILDQIKSLSPDTYKNAKEFVHFVSSSEVLNENGGGDDG-DPDDD 451
Query: 557 ELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGK 589
+ + ND++ + FD+LE L FL S K
Sbjct: 452 DNNNNDNNDHPD-FDQLEASLRKFLLEKRSISK 483
Score = 55 (24.4 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 17/69 (24%), Positives = 38/69 (55%)
Query: 832 VANFPARR--QRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQL 889
V N+PAR+ ++K ++ A E+E+ + KD + + G +N +TKV + ++
Sbjct: 808 VLNYPARQVMNNFQTSIDKRSNEKA-ELEKVI-KDAEISSGFFKNLLTKVERQQGLLKEI 865
Query: 890 KLDRLSEIQ 898
L+ ++ ++
Sbjct: 866 DLESINFVE 874
Score = 43 (20.2 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 673 QISNLDIVASYVFRGEKSAAMPSTSRIQHDI-IGPALLDTQKLLGE-YTMWLQSKNARE- 729
Q++ +DIV V R E+ A +++R+ I G L+ + L + + L R+
Sbjct: 590 QLAMIDIVLESVARSEEVAKKVTSNRVDEIIKYGQQTLNEEFLNDKVFNSDLMFTRRRDT 649
Query: 730 -GRRYKESFE 738
G+ ++FE
Sbjct: 650 IGKSIDDTFE 659
>UNIPROTKB|Q60A52 [details] [associations]
symbol:MCA1019 "Putative uncharacterized protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 EMBL:AE017282 GenomeReviews:AE017282_GR
RefSeq:YP_113495.1 ProteinModelPortal:Q60A52 GeneID:3102401
KEGG:mca:MCA1019 PATRIC:22605844 HOGENOM:HOG000004908 OMA:PPERESP
ProtClustDB:CLSK917864 Uniprot:Q60A52
Length = 556
Score = 90 (36.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 31/93 (33%), Positives = 45/93 (48%)
Query: 431 SPILKEMIIVDTPGTNVILQRQQRL--TEEFVPRADLVLFVISADRPLTESEVVFLRY-- 486
SP LK II+D+PG + QR L T+ + +DLVL A P + LRY
Sbjct: 192 SPFLKGKIIIDSPGFDADPQRDAVLAITKHIIDISDLVLVFFDARHPEPGAMKDTLRYLV 251
Query: 487 TQQWKK----KVVFVLNKSDLYQNAFELEEAIS 515
T+ K+ K +F+LN+ D EE ++
Sbjct: 252 TETIKRHDSNKFLFILNQMDTTAREDNPEEVVA 284
Score = 82 (33.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 26/92 (28%), Positives = 47/92 (51%)
Query: 320 EDREKQLIETERSVLLEAIDVIKKASPLMEEVSLL---IDAVSQIDEPFLLVIVGEYNSG 376
E+ E+ L + E VLL A ++ + E+ L+ + QI ++ ++G +++G
Sbjct: 53 ENLERHLTQ-ENPVLLGAARSFEELDNIARELGLIDPEYASAGQISWWPVISVLGTFSAG 111
Query: 377 KSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
KS+ IN LL R + G ++ T L +SD
Sbjct: 112 KSTFINHLLQARIQRTGNQAVDDKFTVLSYSD 143
>UNIPROTKB|Q5HW55 [details] [associations]
symbol:CJE0461 "GTP-binding protein" species:195099
"Campylobacter jejuni RM1221" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0699 InterPro:IPR022812 PRINTS:PR00195 RefSeq:YP_178480.1
ProteinModelPortal:Q5HW55 STRING:Q5HW55 GeneID:3231223
KEGG:cjr:CJE0461 PATRIC:20042622 HOGENOM:HOG000101443 OMA:VQILNVR
ProtClustDB:CLSK878773 BioCyc:CJEJ195099:GJC0-466-MONOMER
Uniprot:Q5HW55
Length = 569
Score = 108 (43.1 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
L + V +D+ + I+G+++SGKSS++N +L + L GVVP T + TFLR++
Sbjct: 11 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRRDCLPTGVVPVTFKPTFLRYA 64
Score = 67 (28.6 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 27/134 (20%), Positives = 60/134 (44%)
Query: 391 KDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQ 450
+ ++ ++ F ++D +E +Q H + P P+L+++ +VDTPG N +
Sbjct: 76 RSDIITNIEKLAF--YTDQRNEVKQAKSLH------IFAPIPLLEKITLVDTPGLNAN-E 126
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-KKVVFVLNKSDLYQNAFE 509
T + + +++ D +SE ++ + + + VLN+ D N E
Sbjct: 127 NDTLTTFDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQKDKL-NTEE 185
Query: 510 LEEAISFVKENTMK 523
L+ +++ K +K
Sbjct: 186 LDNVLNYAKSIFLK 199
Score = 38 (18.4 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 876 VTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
+TK+ K + + +Q+ + S+ D L + ++ +V+I N+ S
Sbjct: 523 LTKIAKNFLEQSQILIQEKSKFLD-LKKAE--LRKRRVQILNVRES 565
Score = 37 (18.1 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 509 ELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRIN 568
E ++ S+ K N LL+ ++ K+ + +D ++L V +N
Sbjct: 211 EAKDEQSYEKSNFQSLLDFLTQLDTTALKEKFVKRKILNLCEILEDENQLFVGIFDRLLN 270
Query: 569 TFDKLEK---LLYSF 580
F EK L Y F
Sbjct: 271 QFQSYEKHLLLAYEF 285
>TIGR_CMR|CJE_0461 [details] [associations]
symbol:CJE_0461 "GTP-binding protein" species:195099
"Campylobacter jejuni RM1221" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001401 Pfam:PF00350 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0699 InterPro:IPR022812 PRINTS:PR00195 RefSeq:YP_178480.1
ProteinModelPortal:Q5HW55 STRING:Q5HW55 GeneID:3231223
KEGG:cjr:CJE0461 PATRIC:20042622 HOGENOM:HOG000101443 OMA:VQILNVR
ProtClustDB:CLSK878773 BioCyc:CJEJ195099:GJC0-466-MONOMER
Uniprot:Q5HW55
Length = 569
Score = 108 (43.1 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
L + V +D+ + I+G+++SGKSS++N +L + L GVVP T + TFLR++
Sbjct: 11 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRRDCLPTGVVPVTFKPTFLRYA 64
Score = 67 (28.6 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 27/134 (20%), Positives = 60/134 (44%)
Query: 391 KDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQ 450
+ ++ ++ F ++D +E +Q H + P P+L+++ +VDTPG N +
Sbjct: 76 RSDIITNIEKLAF--YTDQRNEVKQAKSLH------IFAPIPLLEKITLVDTPGLNAN-E 126
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-KKVVFVLNKSDLYQNAFE 509
T + + +++ D +SE ++ + + + VLN+ D N E
Sbjct: 127 NDTLTTFDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQKDKL-NTEE 185
Query: 510 LEEAISFVKENTMK 523
L+ +++ K +K
Sbjct: 186 LDNVLNYAKSIFLK 199
Score = 38 (18.4 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 876 VTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
+TK+ K + + +Q+ + S+ D L + ++ +V+I N+ S
Sbjct: 523 LTKIAKNFLEQSQILIQEKSKFLD-LKKAE--LRKRRVQILNVRES 565
Score = 37 (18.1 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 17/75 (22%), Positives = 29/75 (38%)
Query: 509 ELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRIN 568
E ++ S+ K N LL+ ++ K+ + +D ++L V +N
Sbjct: 211 EAKDEQSYEKSNFQSLLDFLTQLDTTALKEKFVKRKILNLCEILEDENQLFVGIFDRLLN 270
Query: 569 TFDKLEK---LLYSF 580
F EK L Y F
Sbjct: 271 QFQSYEKHLLLAYEF 285
>UNIPROTKB|Q8IWA4 [details] [associations]
symbol:MFN1 "Mitofusin-1" species:9606 "Homo sapiens"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=NAS] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0008053 "mitochondrial fusion" evidence=IDA] Reactome:REACT_604
InterPro:IPR001401 InterPro:IPR006884 InterPro:IPR027088
InterPro:IPR027094 Pfam:PF00350 Pfam:PF04799 GO:GO:0005525
GO:GO:0016021 GO:GO:0005741 EMBL:CH471052 GO:GO:0003924
GO:GO:0008053 eggNOG:COG0699 KO:K06030 PANTHER:PTHR10465
EMBL:AF329637 EMBL:AK000700 EMBL:AK314306 EMBL:AC007823
EMBL:AC007620 EMBL:BC040557 EMBL:U95822 EMBL:AF054986
IPI:IPI00293073 IPI:IPI00395973 IPI:IPI00412274 RefSeq:NP_284941.2
UniGene:Hs.478383 ProteinModelPortal:Q8IWA4 SMR:Q8IWA4
DIP:DIP-50289N IntAct:Q8IWA4 STRING:Q8IWA4 TCDB:9.B.25.2.1
PhosphoSite:Q8IWA4 DMDM:150421594 PaxDb:Q8IWA4 PRIDE:Q8IWA4
DNASU:55669 Ensembl:ENST00000263969 Ensembl:ENST00000280653
Ensembl:ENST00000357390 Ensembl:ENST00000471841 GeneID:55669
KEGG:hsa:55669 UCSC:uc003fjs.3 UCSC:uc010hxc.3 CTD:55669
GeneCards:GC03P179065 HGNC:HGNC:18262 HPA:CAB033437 MIM:608506
neXtProt:NX_Q8IWA4 PharmGKB:PA134945973 HOVERGEN:HBG052465
InParanoid:Q8IWA4 OMA:AQNRIFF OrthoDB:EOG43JC43 PhylomeDB:Q8IWA4
GenomeRNAi:55669 NextBio:60436 ArrayExpress:Q8IWA4 Bgee:Q8IWA4
CleanEx:HS_MFN1 Genevestigator:Q8IWA4 GermOnline:ENSG00000171109
PANTHER:PTHR10465:SF2 Uniprot:Q8IWA4
Length = 741
Score = 99 (39.9 bits), Expect = 0.00092, Sum P(3) = 0.00091
Identities = 50/244 (20%), Positives = 112/244 (45%)
Query: 436 EMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKKV 494
++++VD+PGT+V + + ++F AD+ + V +++ L +E F + ++ K
Sbjct: 173 DLVLVDSPGTDVTTELDSWI-DKFCLDADVFVLVANSESTLMNTEKHFFHKVNERLSKPN 231
Query: 495 VFVLNKS-DLYQNAFE---------LEEAISFVKENTMKLLN-IENVT-IYPVSARSTLE 542
+F+LN D + E +E + F+ E +K++N +E I+ VSA+ L
Sbjct: 232 IFILNNRWDASASEPEYMEDVRRQHMERCLHFLVEE-LKVVNALEAQNRIFFVSAKEVLS 290
Query: 543 AKLSVSSAVGKDHSELSVNDS-HWRINTFDKLEKLLYSFLDGSSSTGK-ERMRLKLETPI 600
A+ A G S +++ + H R+ F E++ + S+ K E+ ++ + +
Sbjct: 291 ARKQ--KAQGMPESGVALAEGFHARLQEFQNFEQIFEECISQSAVKTKFEQHTIRAKQIL 348
Query: 601 RIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDST 660
+ ++ S L +D + + + ID L +M ++ ++K + +
Sbjct: 349 ATVKNIMDSVN-LAAEDKRH--YSVEEREDQIDRLDFIRNQMNLLTLDVKKKIKEVTEEV 405
Query: 661 KSRV 664
++V
Sbjct: 406 ANKV 409
Score = 68 (29.0 bits), Expect = 0.00092, Sum P(3) = 0.00091
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
+++S++ + +S+ + G +SGKSSVINA+L + L G+ TN
Sbjct: 62 DKLSIIGEVLSR--RHMKVAFFGRTSSGKSSVINAMLWDKVLPSGIGHITN 110
Score = 49 (22.3 bits), Expect = 0.00092, Sum P(3) = 0.00091
Identities = 17/77 (22%), Positives = 36/77 (46%)
Query: 844 EKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDA-AQL--KLDRLSEIQDE 900
EK+ I + +++ + T L V K ++ A+L ++D+L +IQ+
Sbjct: 652 EKLRMIVSSTSANCSHQVKQQIATTFARLCQQVDITQKQLEEEIARLPKEIDQLEKIQNN 711
Query: 901 LSNVQEKIQTLQVEIQN 917
++ K L+ E++N
Sbjct: 712 SKLLRNKAVQLENELEN 728
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 921 889 0.00087 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 619 (66 KB)
Total size of DFA: 363 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.61u 0.11s 85.72t Elapsed: 00:00:05
Total cpu time: 85.61u 0.11s 85.72t Elapsed: 00:00:05
Start: Tue May 21 00:31:38 2013 End: Tue May 21 00:31:43 2013