BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002437
(921 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225436930|ref|XP_002275196.1| PREDICTED: uncharacterized protein LOC100256371 [Vitis vinifera]
gi|296086702|emb|CBI32337.3| unnamed protein product [Vitis vinifera]
Length = 926
Score = 1214 bits (3142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/903 (66%), Positives = 737/903 (81%), Gaps = 19/903 (2%)
Query: 25 FPIPRFKPPPHRTHFPIKSISNDNSFRSEDSAAAPVISEKQQRPRTLYPGGYKRPEIKVP 84
+P+P F R+ I SI+N+ + P S+ +Q PRT+YPGGYKRPEI+VP
Sbjct: 37 YPLPLFSR--RRSRLSIVSIANN---------SIPPTSQNKQ-PRTVYPGGYKRPEIRVP 84
Query: 85 NVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL 144
++VLQL +VL LD++DEAV+K+VG+VVL+GG+ SG +YEAACLLKSVV++RA
Sbjct: 85 SLVLQLSVDEVLDRAGVLDVVDEAVSKWVGVVVLDGGDGSGGRLYEAACLLKSVVRERAY 144
Query: 145 FLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNA 204
++AERVDIAAAVNA+GV+LSD+GLPAIVARNTM DS SESV+LPLV RNVQT +AAF A
Sbjct: 145 LMVAERVDIAAAVNANGVVLSDKGLPAIVARNTMMDSRSESVILPLVARNVQTANAAFTA 204
Query: 205 SSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIMNAS-----PLVDVSKFLKSGASG 259
S+SEGADFL+ E ++++V+ S+F NVKIPIF + S L + S+ LK+GASG
Sbjct: 205 SNSEGADFLLYGAVEEKQSEVLATSVFENVKIPIFAVVPSRAKDTSLFEASELLKAGASG 264
Query: 260 FVISLEDLSLFNDGVLSQMFCANGTTNEKT-DRGEDVSNVKLLDTSNSFFGKERVAGFVK 318
V SLEDL LF+D VL ++F N++T D ++++ +K LD ++ GK RVAGF+K
Sbjct: 265 LVFSLEDLRLFSDDVLRKLFETVHAMNKRTEDELQNLNKLKSLDVNSGVPGKRRVAGFIK 324
Query: 319 FEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
EDREK++IETER VLLEAI++I+KA+PLMEEVSLLIDAVSQ+DEPFLL IVGE+NSGKS
Sbjct: 325 LEDREKEVIETERLVLLEAINIIQKAAPLMEEVSLLIDAVSQLDEPFLLAIVGEFNSGKS 384
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMI 438
+VINALLG+RYLK+GVVPTTNEITFLR+S+L S+ +QRCERHPDGQYICYLP+PILKEM
Sbjct: 385 TVINALLGRRYLKEGVVPTTNEITFLRYSELDSDGKQRCERHPDGQYICYLPAPILKEMN 444
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
IVDTPGTNVILQRQQRLTEEFVPRADL+LFVISADRPLTESEV FLRYTQQW+KK+VFVL
Sbjct: 445 IVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPLTESEVAFLRYTQQWRKKIVFVL 504
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
NK+DLYQNA ELEEA+SF+K+N KLLN+++V +YPVSAR LEAKLS +S +GKD+
Sbjct: 505 NKADLYQNASELEEAVSFIKKNVQKLLNVKHVILYPVSARLALEAKLS-ASGIGKDYEPS 563
Query: 559 SVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDC 618
+ SHW+ +F + E LYSFLDGS+STG ERMRLKLETPI IAERL SSCETLV +D
Sbjct: 564 VADSSHWKATSFSEFENFLYSFLDGSTSTGMERMRLKLETPIGIAERLFSSCETLVRQDY 623
Query: 619 QDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLD 678
Q AKQDL NEM+ S+KEY +KMESE+ISWRR+TLSLID+TK+R+VKLI+STLQ+SNLD
Sbjct: 624 QYAKQDLASINEMVSSVKEYAVKMESENISWRRQTLSLIDTTKARIVKLIDSTLQLSNLD 683
Query: 679 IVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFE 738
+V SYV +G KSA +P+TS +Q+DIIGPA D +KLLGEY WLQS NA EGR YKESFE
Sbjct: 684 LVGSYVLKGAKSATLPATSSVQNDIIGPAHADARKLLGEYVTWLQSNNAHEGRLYKESFE 743
Query: 739 NRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGTFGGLG 798
+WP VY QV + YEL+RK D S + +E+FSA + S++F+QEIREVFLG FGGLG
Sbjct: 744 RKWPLFVYPHNQVGLETYELLRKGDELSLKALENFSAGAASRLFDQEIREVFLGVFGGLG 803
Query: 799 AAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIE 858
AAG SASLLTSVLPTTLEDLLALGLCSAGG++A++NFPARR+ +IEKV + AD ARE+E
Sbjct: 804 AAGFSASLLTSVLPTTLEDLLALGLCSAGGWLAISNFPARRKGMIEKVTRAADAFARELE 863
Query: 859 EAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNL 918
AMQKDL ETV +LENFV + KPYQD AQ +LD+L EIQDELSNV++K+QTLQ++IQNL
Sbjct: 864 VAMQKDLLETVENLENFVKLIAKPYQDEAQNRLDKLLEIQDELSNVEKKLQTLQIQIQNL 923
Query: 919 HVS 921
HVS
Sbjct: 924 HVS 926
>gi|255559458|ref|XP_002520749.1| conserved hypothetical protein [Ricinus communis]
gi|223540134|gb|EEF41711.1| conserved hypothetical protein [Ricinus communis]
Length = 921
Score = 1194 bits (3088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/898 (66%), Positives = 727/898 (80%), Gaps = 10/898 (1%)
Query: 31 KPPPHRTH-FPIKSISNDNSFRSEDSAAAPVISEKQQRPRTLYPGGYKRPEIKVPNVVLQ 89
K P RTH FPI S+ N N F + + P + QQ PRTL+PGGYKRPEIKVP++VLQ
Sbjct: 27 KSSPLRTHRFPILSLPN-NPFHQSINQSLPT-QQSQQSPRTLFPGGYKRPEIKVPSIVLQ 84
Query: 90 LEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIAE 149
L P VL G ALD +D+A++K+VGIVVLNG + +GK++YEAACLLKSVVKDR FLI E
Sbjct: 85 LYPDDVLRDG-ALDFLDKALSKWVGIVVLNGADVTGKTLYEAACLLKSVVKDRVYFLIGE 143
Query: 150 RVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEG 209
RVDIAAAVNASGV+LSDQGLP+IVARN M+DS SES++LPLVGRNVQ+ AA +AS+SEG
Sbjct: 144 RVDIAAAVNASGVVLSDQGLPSIVARNMMRDSKSESILLPLVGRNVQSPTAALDASNSEG 203
Query: 210 ADFLVCCFGEGQKADVIENSLFTNVKIPIFIMNAS-----PLVDVSKFLKSGASGFVISL 264
ADFL+ + + D+ S F +VKIPIFI++ S +++ S+ LKSGA G V+SL
Sbjct: 204 ADFLIYSPEQEEHFDLKIYSGFADVKIPIFIIHGSRRPAMSVMEASELLKSGAGGLVMSL 263
Query: 265 EDLSLFNDGVLSQMFCANGTTNEKTDRG-EDVSNVKLLDTSNSFFGKERVAGFVKFEDRE 323
EDL LF+D LSQ+F K++ G E + K LD N GK+RVAGFV EDRE
Sbjct: 264 EDLRLFSDEFLSQVFYTLSAMENKSENGLESFNKHKSLDIGNDVHGKKRVAGFVNVEDRE 323
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINA 383
KQLIETERSVLL+AI+VI+KA+P MEEVSLLIDAVSQIDEPFLL IVGE+NSGKS+VINA
Sbjct: 324 KQLIETERSVLLQAINVIQKAAPQMEEVSLLIDAVSQIDEPFLLAIVGEFNSGKSTVINA 383
Query: 384 LLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTP 443
LLG+RYLK+GVVPTTNEITFLR+S SEE QRCERHPDGQY+CYLP+PIL EM IVDTP
Sbjct: 384 LLGERYLKEGVVPTTNEITFLRYSQYNSEEPQRCERHPDGQYVCYLPAPILNEMNIVDTP 443
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
GTNVILQRQQRLTEEFVPRADL+LFVISADRPLTESEV FLRYTQQWKKKVVFVLNKSDL
Sbjct: 444 GTNVILQRQQRLTEEFVPRADLLLFVISADRPLTESEVAFLRYTQQWKKKVVFVLNKSDL 503
Query: 504 YQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDS 563
YQNA ELEEA SF+KENT KLLN E+V +YPVSARS LEAKLS SS +D++E ++S
Sbjct: 504 YQNASELEEAKSFIKENTRKLLNTESVILYPVSARSALEAKLSASSDSERDYTESLNSES 563
Query: 564 HWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQ 623
HW+ ++FD+ EK LYSFLDGS+ TG ERM+LKLETPI IA ++SSCE V ++ Q A+Q
Sbjct: 564 HWKTSSFDEFEKFLYSFLDGSTETGMERMKLKLETPIAIANCIISSCEAFVKQETQYAEQ 623
Query: 624 DLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASY 683
DL ++++DS+K+Y +KME +SISWR+K LS I++TKSRV++LIESTLQISNLD+ SY
Sbjct: 624 DLATVSDIVDSVKDYTLKMEKDSISWRKKALSKIETTKSRVLELIESTLQISNLDLATSY 683
Query: 684 VFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPS 743
+ +GEKS P++ R+QHDIIGPA+ D QKLL EY +WL+S +A E + YKE+FE RWPS
Sbjct: 684 LLKGEKSTMTPTSLRVQHDIIGPAVSDVQKLLEEYALWLKSNSAHESKLYKEAFEKRWPS 743
Query: 744 LVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLS 803
++ +++ + YEL+ K D + I++FS ++ SK+FEQEIREV+LGTFGGLGAAGLS
Sbjct: 744 IINPDSRMHSETYELLEKADDLGLKAIQNFSTAAASKLFEQEIREVYLGTFGGLGAAGLS 803
Query: 804 ASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQK 863
ASLLTSVLPTTLEDLLALGLCSAGG+IA+++FP R+Q +++KV +IADGL RE+EEAMQK
Sbjct: 804 ASLLTSVLPTTLEDLLALGLCSAGGFIAISSFPYRKQEMVDKVRRIADGLMREVEEAMQK 863
Query: 864 DLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
DL ET+ +L+NF+ + KPYQDAAQ +LD L IQ+ELS ++EKI+TLQVEIQNLH+S
Sbjct: 864 DLLETLVNLDNFLKIISKPYQDAAQQRLDDLLNIQNELSEMEEKIRTLQVEIQNLHLS 921
>gi|449444923|ref|XP_004140223.1| PREDICTED: uncharacterized protein LOC101213431 [Cucumis sativus]
Length = 924
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/926 (63%), Positives = 724/926 (78%), Gaps = 20/926 (2%)
Query: 7 LHHAPT-RV-PAPRFL-SDPYFPI--PRFKPPPHRTH-FPIKSISNDNSFRSEDSAAAPV 60
LHH R+ +P FL S P+F + P K P R H F I S+S +N F+S S + P
Sbjct: 6 LHHNSVFRIHSSPLFLKSTPFFQMHPPLLKTSPRRPHRFSINSVS-ENPFQS--SQSIPK 62
Query: 61 ISEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNG 120
EK Q PRTL+P G+KRPEIKVP VVLQL+ +VLAG DALDL+D AV+K+VGIVVLN
Sbjct: 63 TPEKPQ-PRTLFPSGFKRPEIKVPCVVLQLDAAEVLAGDDALDLVDRAVSKWVGIVVLNS 121
Query: 121 GEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKD 180
GE G +YEAAC LKS+V DRA LIAERVDIA AV ASGV+LSDQGLP IVARNTM D
Sbjct: 122 GEGGGGKLYEAACKLKSLVGDRAYLLIAERVDIATAVGASGVVLSDQGLPPIVARNTMLD 181
Query: 181 SMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI 240
S S+S+ LPLV RNV++ +A NAS SEGADFL+ F E +K D+ +S+F NVKIPIFI
Sbjct: 182 STSDSLFLPLVARNVKSSISAVNASKSEGADFLLYDFDE-EKLDMTTDSVFKNVKIPIFI 240
Query: 241 MNASPLVDVS-----KFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTN-EKTDRGED 294
+ +S +V+ K+L+ GASG VISL+ L L ++ + ++F + T N K D E
Sbjct: 241 LFSSYGANVTFHEALKWLEFGASGLVISLQALRLLSNDDVGKLFDSIFTENGRKEDDIES 300
Query: 295 VSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLL 354
++ L + N G +VAGF EDREKQ+IETE+ VL EAI+VI+KA+PLMEEVSLL
Sbjct: 301 SNSSSLFNMGNGALGTTQVAGFANLEDREKQVIETEKLVLREAINVIQKAAPLMEEVSLL 360
Query: 355 IDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ 414
D+VSQIDEPF+L IVGE+NSGKS+VINALLG+RYLKDGVVPTTNEITFL+FS+L S EQ
Sbjct: 361 NDSVSQIDEPFMLAIVGEFNSGKSTVINALLGRRYLKDGVVPTTNEITFLKFSELNSSEQ 420
Query: 415 QRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
QRCERHPDGQYICYLP+PIL EM IVDTPGTNVIL+RQQRLTEEFVPRADL+LFVISADR
Sbjct: 421 QRCERHPDGQYICYLPAPILNEMNIVDTPGTNVILERQQRLTEEFVPRADLLLFVISADR 480
Query: 475 PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYP 534
PLTESEV FLRYT QWKKKVVFVLNKSDLYQN+ ELEEA+SFVKEN KLLN E+V ++P
Sbjct: 481 PLTESEVNFLRYTLQWKKKVVFVLNKSDLYQNSDELEEALSFVKENAAKLLNTEHVFVFP 540
Query: 535 VSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRL 594
VSAR L+ KLS + G+ LS + S+WR ++F +LE LYSFLDGS+S GKERM+L
Sbjct: 541 VSARYALDEKLSATLESGE---VLSPSSSYWRSSSFHELENFLYSFLDGSTSNGKERMKL 597
Query: 595 KLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTL 654
KL+TP+ IAERLLS+ ETLV ++ + AKQDL NE++D ++ Y +KME+ESI WRR+ L
Sbjct: 598 KLQTPVSIAERLLSAAETLVRQEIRFAKQDLASLNELVDGVRNYGLKMENESIIWRRQAL 657
Query: 655 SLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKL 714
SLIDST+SR++KL+ESTLQ+SNLDI A YV +GEK+ + +TS+IQ+DII PAL D QKL
Sbjct: 658 SLIDSTQSRIMKLVESTLQLSNLDIAAYYVLKGEKTTTLSATSKIQNDIISPALADAQKL 717
Query: 715 LGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFS 774
L +Y WLQS NA EG Y+ES + WPS+V+ Q++ + YEL++KVD S +VI++FS
Sbjct: 718 LQDYESWLQSGNANEGTVYQESLQKLWPSIVFPATQMHFETYELLKKVDDLSLKVIKNFS 777
Query: 775 ASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVAN 834
S+ SK+F+QEIRE FLGTFGGLGAAGLSASLLT+VLPTT+EDLLALGLCSAGG++A++N
Sbjct: 778 PSAASKLFDQEIREAFLGTFGGLGAAGLSASLLTTVLPTTIEDLLALGLCSAGGFLAISN 837
Query: 835 FPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRL 894
FP+RRQ+++ KV + ADG ARE+E AMQ+DL E V +LE FV+ + KPY+D Q +LD+L
Sbjct: 838 FPSRRQQLVSKVKRTADGFARELEAAMQEDLNEAVRNLETFVSVISKPYRDDTQDRLDKL 897
Query: 895 SEIQDELSNVQEKIQTLQVEIQNLHV 920
EIQDEL NV +K+Q LQ EIQNLHV
Sbjct: 898 LEIQDELCNVGKKLQKLQNEIQNLHV 923
>gi|449521128|ref|XP_004167583.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101213431
[Cucumis sativus]
Length = 924
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/927 (63%), Positives = 724/927 (78%), Gaps = 22/927 (2%)
Query: 7 LHHAPT-RV-PAPRFL-SDPYFPI--PRFKPPPHRTH-FPIKSISNDNSFRSEDSAAAPV 60
LHH R+ +P FL S P+F + P K P R H F I S+S +N F+S S + P
Sbjct: 6 LHHNSVFRIHSSPLFLKSTPFFQMHPPLLKTSPRRPHRFSINSVS-ENPFQS--SQSIPK 62
Query: 61 ISEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNG 120
EK Q PRTL+P G+KRPEIKVP VVLQL+ +VLAG DALDL+D AV+K+VGIVVLN
Sbjct: 63 TPEKPQ-PRTLFPSGFKRPEIKVPCVVLQLDAAEVLAGDDALDLVDRAVSKWVGIVVLNS 121
Query: 121 GEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKD 180
GE G +YEAAC LKS+V DRA LIAERVDIA AV ASGV+LSDQGLP IVARNTM D
Sbjct: 122 GEGGGGKLYEAACKLKSLVGDRAYLLIAERVDIATAVGASGVVLSDQGLPPIVARNTMLD 181
Query: 181 SMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI 240
S S+S+ LPLV RNV++ +A NAS SEGADFL+ F E +K D+ +S+F NVKIPIFI
Sbjct: 182 STSDSLFLPLVARNVKSSISAVNASKSEGADFLLYDFDE-EKLDMTTDSVFKNVKIPIFI 240
Query: 241 MNASPLVDVS-----KFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTN-EKTDRGED 294
+ +S +V+ K+L+ GASG VISL+ L L ++ + ++F + T N K D E
Sbjct: 241 LFSSYGANVTFHEALKWLEFGASGLVISLQALRLLSNDDVGKLFDSIFTENGRKEDDIES 300
Query: 295 VSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLL 354
++ L + N G +VAGF EDREKQ+IETE+ VL EAI+VI+KA+PLMEEVSLL
Sbjct: 301 SNSSSLFNMGNGALGTTQVAGFANLEDREKQVIETEKLVLREAINVIQKAAPLMEEVSLL 360
Query: 355 IDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ 414
D+VSQIDEPF+L IVGE+NSGKS+VINALLG+RYLKDGVVPTTNEITFL+FS+L S EQ
Sbjct: 361 NDSVSQIDEPFMLAIVGEFNSGKSTVINALLGRRYLKDGVVPTTNEITFLKFSELNSNEQ 420
Query: 415 QRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
QRCERHPDGQYICYLP+PIL EM IVDTPGTNVIL+RQQRLTEEFVPRADL+LFVISADR
Sbjct: 421 QRCERHPDGQYICYLPAPILNEMNIVDTPGTNVILERQQRLTEEFVPRADLLLFVISADR 480
Query: 475 PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYP 534
PLTESEV FLRYTQQWKKKVVFVLNKSDLYQN+ ELEEA+SF+KEN KLLN E+V ++P
Sbjct: 481 PLTESEVNFLRYTQQWKKKVVFVLNKSDLYQNSDELEEALSFIKENAAKLLNTEHVFVFP 540
Query: 535 VSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRL 594
VSARS L+ KLS + G+ LS + S+WR ++F +LE LYSFLDGS+S GKERM+L
Sbjct: 541 VSARSALDEKLSATLESGE---VLSPSSSYWRSSSFHELENFLYSFLDGSTSNGKERMKL 597
Query: 595 KLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTL 654
KL+TP+ IAERLLS+ ETLV ++ + AKQDL NE++D ++ Y +KME+ESI WRR+ L
Sbjct: 598 KLQTPVSIAERLLSAAETLVRQEIRFAKQDLASLNELVDGVRNYGLKMENESIIWRRQAL 657
Query: 655 SLIDS-TKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQK 713
SL+ T+SR++KL+ESTLQ+SNLDI A YV +GE++ + +TS+IQ+DII PAL D QK
Sbjct: 658 SLVYRFTQSRIMKLVESTLQLSNLDIAAYYVLKGERT-TLSATSKIQNDIISPALADAQK 716
Query: 714 LLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDF 773
LL +Y WLQS NA EG Y+ES + WPS+V+ Q++ + YEL++KVD S +VI++F
Sbjct: 717 LLQDYESWLQSGNANEGTVYQESLQKLWPSIVFPATQMHFETYELLKKVDDLSLKVIKNF 776
Query: 774 SASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVA 833
S S+ SK+F+QEIRE FLGTFGGLGAAGLSASLLT+VLPTT+EDLLALGLCSAGG++A++
Sbjct: 777 SPSAASKLFDQEIREAFLGTFGGLGAAGLSASLLTTVLPTTIEDLLALGLCSAGGFLAIS 836
Query: 834 NFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDR 893
NFP+RRQ+++ KV + ADG ARE+E AMQ+DL E V +LE FV+ + KPY+D Q +LD+
Sbjct: 837 NFPSRRQQLVSKVKRTADGFARELEAAMQEDLNEAVRNLETFVSVISKPYRDDTQDRLDK 896
Query: 894 LSEIQDELSNVQEKIQTLQVEIQNLHV 920
L EIQDEL NV +K+Q LQ EIQNLHV
Sbjct: 897 LLEIQDELCNVGKKLQKLQNEIQNLHV 923
>gi|356502809|ref|XP_003520208.1| PREDICTED: uncharacterized protein LOC100785233 [Glycine max]
Length = 914
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/925 (61%), Positives = 707/925 (76%), Gaps = 27/925 (2%)
Query: 11 PTRVPAPRFLSDPYFPI-PRFK--------PPPHRTHFPIKSISNDNSFRSEDSAAAPVI 61
P V +P S P+ I PR P FPI S+SN +S + P
Sbjct: 3 PCSVTSP---SSPFTAIIPRHTFFSRSSSLPLRRARAFPINSLSNGSSSQFNQQLFRP-- 57
Query: 62 SEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVL-AGGDALDLIDEAVAKFVGIVVLNG 120
+PRTL+PGGYKRPE+KVP +VLQL+P +VL A DAL LID AV+K+VGIVVL
Sbjct: 58 -RDPPQPRTLFPGGYKRPELKVPTLVLQLDPAEVLSADTDALALIDRAVSKWVGIVVLAS 116
Query: 121 GEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKD 180
EASG +YEAAC LKS+++DRA L+AERVDIAAA ASGVLLSDQGLP +VARNTM D
Sbjct: 117 NEASGGKLYEAACSLKSLIQDRAYLLVAERVDIAAATAASGVLLSDQGLPTVVARNTMLD 176
Query: 181 SMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI 240
S SE VVLPLV R VQT+DAA NAS SEGADFL+ G+ + SL+ +VKIPIF+
Sbjct: 177 SKSELVVLPLVARIVQTVDAAVNASKSEGADFLIYGGGDLNRVGQEVGSLYESVKIPIFV 236
Query: 241 ---MNASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSN 297
N D S L SGASGFV SL + LF D L ++F GT D G N
Sbjct: 237 SCVKNNMSYADASGLLASGASGFVTSLANFGLFGDEFLHKLF---GTVYASDDGGRMSEN 293
Query: 298 VKLLDTSNSFFGK-ERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLID 356
L+ N F + E VAGFVK EDREK LIETER VL EAI+VIK+A+PLMEEVSLL D
Sbjct: 294 K--LNVDNGFQSETEVVAGFVKLEDREKLLIETERLVLNEAIEVIKRAAPLMEEVSLLND 351
Query: 357 AVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQR 416
AVSQIDEPFLLVIVGE+NSGKS+VINALLG+RYLK+GVVPTTNEITFLR++DL E+QQ
Sbjct: 352 AVSQIDEPFLLVIVGEFNSGKSTVINALLGERYLKEGVVPTTNEITFLRYTDLDIEQQQ- 410
Query: 417 CERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPL 476
CERHPDGQYICY+P+PILKEM IVDTPGTNVILQRQQRLTEEFVPRADL+LFVISADRPL
Sbjct: 411 CERHPDGQYICYIPAPILKEMTIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPL 470
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
T SE+ FLRY+QQWKKK VFVLNK+D+YQN ELEEA+SF+K+N +LLN E+V +YPVS
Sbjct: 471 TGSEIAFLRYSQQWKKKAVFVLNKADIYQNNHELEEAMSFIKDNIQRLLNTEDVILYPVS 530
Query: 537 ARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKL 596
ARS LEAKL ++ VG+ + ELS +DSH+ +F +LE LYSFLDGS+ G +RMRLKL
Sbjct: 531 ARSALEAKLMATTNVGRLNEELSTSDSHYGAISFFELENFLYSFLDGSTIPGMDRMRLKL 590
Query: 597 ETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSL 656
ETP+ IA+RL+S+CETLV +D + AKQDL ++++++ ++ + M +ES+SWRR+TLSL
Sbjct: 591 ETPVAIADRLISACETLVTQDYRYAKQDLAAVEDIVNNVNDFALNMVTESLSWRRQTLSL 650
Query: 657 IDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLG 716
I++TKSRV++L+E+ LQ+SN DI+ASY F+GEK+ MP+TSRIQ+DIIGPA+ QK+L
Sbjct: 651 IETTKSRVIELVEANLQLSNFDIIASYAFKGEKN-VMPTTSRIQNDIIGPAVSAVQKILE 709
Query: 717 EYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSAS 776
EY WL SK ++GR YKESFE RWPSL + Q+ + +L++KVD S+VI++FS++
Sbjct: 710 EYGNWLYSKYTQQGRLYKESFEKRWPSLSHESSQINFETDQLLKKVDQAGSQVIDNFSSN 769
Query: 777 STSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFP 836
+ SK FEQE+RE+ LGTFG LG AGLSASLLTSVL TTL+DLLALG+CSAGGY+A++ FP
Sbjct: 770 AVSKSFEQEVREMILGTFGQLGVAGLSASLLTSVLQTTLDDLLALGICSAGGYLAISTFP 829
Query: 837 ARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSE 896
ARRQ+VI+KV + AD LA E+EEAM+KDL E + +L+ FV + KPYQD AQ +L+RL E
Sbjct: 830 ARRQKVIDKVKRKADTLAYELEEAMKKDLTEAIENLDTFVKVLSKPYQDEAQNRLNRLVE 889
Query: 897 IQDELSNVQEKIQTLQVEIQNLHVS 921
IQ+ELSNV++K++TLQ++IQNL+VS
Sbjct: 890 IQEELSNVEKKLRTLQIDIQNLNVS 914
>gi|297843118|ref|XP_002889440.1| hypothetical protein ARALYDRAFT_470295 [Arabidopsis lyrata subsp.
lyrata]
gi|297335282|gb|EFH65699.1| hypothetical protein ARALYDRAFT_470295 [Arabidopsis lyrata subsp.
lyrata]
Length = 923
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/933 (60%), Positives = 717/933 (76%), Gaps = 28/933 (3%)
Query: 1 MKPLLSLHHAPTRVPAPRFLS--DPYFP-----IPRFKPPPHRTHFPIKSISNDNSFRSE 53
M+ L+S V +P +S P FP + F P HR P SI N S S
Sbjct: 1 MRTLISHRQC---VTSPFLISAASPPFPGRCFQLSSFTAPRHR-RLPSLSIRN-VSHESA 55
Query: 54 DSAAAPVISEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGG--DALDLIDEAVAK 111
D ++ RPRTLYPGGYKRPE+ VP V+L+L+ +V++G + +DL+D A+AK
Sbjct: 56 DQTSS-------SRPRTLYPGGYKRPELAVPGVLLRLDADEVMSGNREETVDLVDRALAK 108
Query: 112 FVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPA 171
V IVV++GG +GK +YEAACLLKS+VK RA LIAERVDIA+AV ASGV LSD+GLPA
Sbjct: 109 SVQIVVIDGGATAGK-LYEAACLLKSLVKGRAYLLIAERVDIASAVGASGVALSDEGLPA 167
Query: 172 IVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLF 231
IVARNT+ S +SVVLPLV R V+ +D+A +ASSSEGADFL+ GE ++ ++ +SL
Sbjct: 168 IVARNTLMGSNPDSVVLPLVARIVKDVDSALSASSSEGADFLILGSGEDKQVGLLSDSLL 227
Query: 232 TNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGT---TNEK 288
+VKIPIF+ +S ++ + LKSGASGFVISL+DL D L Q C +G +E
Sbjct: 228 KSVKIPIFVTCSSKREEL-QLLKSGASGFVISLKDLRSSRDVALRQ--CLDGAYVVNHET 284
Query: 289 TDRGEDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLM 348
++ E + N K L ++ K AGF+K ED++K +IE E+SVL E I++I+KA+PLM
Sbjct: 285 QNKNESILNDKTLVETSDLPEKNNSAGFIKLEDKQKLIIEMEKSVLGETIEIIQKAAPLM 344
Query: 349 EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
EEVSLLIDAVS+IDEPFL+VIVGE+NSGKS+VINALLGKRYLK+GVVPTTNEITFL +SD
Sbjct: 345 EEVSLLIDAVSRIDEPFLMVIVGEFNSGKSTVINALLGKRYLKEGVVPTTNEITFLCYSD 404
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
L SEEQQRC+ HPDGQY+CYLP+PILK++ IVDTPGTNVILQRQQRLTEEFVPRADL++F
Sbjct: 405 LESEEQQRCQTHPDGQYVCYLPAPILKDINIVDTPGTNVILQRQQRLTEEFVPRADLLVF 464
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIE 528
V+SADRPLTESEV FLRYTQQWKKK VF+LNKSD+Y++A ELEEAISFVKENT KLLN E
Sbjct: 465 VLSADRPLTESEVAFLRYTQQWKKKFVFILNKSDIYRDARELEEAISFVKENTRKLLNTE 524
Query: 529 NVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTG 588
NV +YPVSARS LEAKLS +S VG+D E+S S+WR+ +F++LEK LYSFLD S++TG
Sbjct: 525 NVILYPVSARSALEAKLSTASLVGRDDLEVSDPGSNWRVQSFNELEKFLYSFLDSSTATG 584
Query: 589 KERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESIS 648
ER+RLKLETP+ IAERLL+S E+LV +DC A++DL A+++I+ KEY +KME ESIS
Sbjct: 585 MERIRLKLETPMAIAERLLASVESLVRQDCLAAREDLASADKIINRTKEYALKMEYESIS 644
Query: 649 WRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPAL 708
WRR+ LSLID+ + +VV LI +TL++S+LD+ SY+F+GE SA++ +TS++Q +I+ PAL
Sbjct: 645 WRRQALSLIDNARLQVVDLIGTTLRLSSLDLAVSYLFKGENSASIAATSKVQGEILAPAL 704
Query: 709 LDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSR 768
+ ++LLG+Y WLQS AREG +SFEN+WP+ V + Q+ D Y+L+RK D +S +
Sbjct: 705 TNAKELLGKYAEWLQSNTAREGSLSLKSFENKWPTYVNSKTQLGIDTYDLLRKTDKFSLK 764
Query: 769 VIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGG 828
I++ SA +TSK EQ+IREVF+ T GGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGG
Sbjct: 765 TIQNLSAGTTSKRLEQDIREVFVVTVGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGG 824
Query: 829 YIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQ 888
Y+A+ANFP RRQ +I KVNK+AD LA+++E++M+KDL + +L NFV V KPY++ AQ
Sbjct: 825 YVAIANFPYRRQAIIGKVNKVADALAQQLEDSMRKDLSDATDNLVNFVNIVAKPYREEAQ 884
Query: 889 LKLDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
L+LD L IQ ELS+++ K+Q LQV+I NLHVS
Sbjct: 885 LRLDHLLGIQKELSDIRSKLQLLQVDIDNLHVS 917
>gi|356536771|ref|XP_003536908.1| PREDICTED: uncharacterized protein LOC100808213 [Glycine max]
Length = 915
Score = 1079 bits (2790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/923 (61%), Positives = 709/923 (76%), Gaps = 22/923 (2%)
Query: 11 PTRVPAPRFLSDPYFPI-PRF---KPP--PHRTH--FPIKSISNDNSFRSEDSAAAPVIS 62
P V +P S P+ I PR + P P R FPI S+SN+ ++ + S
Sbjct: 3 PCSVTSP---SSPFTAIIPRHTHSRSPSLPLRVARAFPINSLSNNAESSAQFNQQLFRPS 59
Query: 63 EKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVL-AGGDALDLIDEAVAKFVGIVVLNGG 121
Q+PRTL+PGGYKRPE+ VP +VLQL+P + L A DAL LID+AV+K+VGIVVL
Sbjct: 60 YPPQQPRTLFPGGYKRPELNVPTLVLQLDPDEFLSADTDALALIDKAVSKWVGIVVLASN 119
Query: 122 EASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDS 181
+ASG +YEAAC LKS+++DRA L+AERVDIAAA ASGVLLSDQGLP +VARN M DS
Sbjct: 120 QASGGKLYEAACSLKSLLQDRAYLLVAERVDIAAAAAASGVLLSDQGLPTVVARNMMLDS 179
Query: 182 MSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIM 241
SE VVLPLV R V+T+DAA NAS SEGADFL+ G+ + S++ +VKIPIF+
Sbjct: 180 KSELVVLPLVARIVRTVDAAVNASKSEGADFLIYGGGDLNRVGQEVGSVYESVKIPIFVS 239
Query: 242 NASPL--VDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSNVK 299
+ D S SGASGFV SLE+ LF D L ++F GT +D G ++S K
Sbjct: 240 CGKNMSYTDASGLFASGASGFVTSLENFGLFGDEFLHKLF---GTVY-ASDDGGNMSENK 295
Query: 300 LLDTSNSFFGK-ERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAV 358
L + N F + E VAGFVK EDREK LIETER VL EAI+ IK+A+PLMEEVSLL DAV
Sbjct: 296 L-NVDNGFQSETEVVAGFVKLEDREKLLIETERLVLNEAIEAIKRAAPLMEEVSLLNDAV 354
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE 418
SQIDEPFLLVIVGE+NSGKS+VINALLG+RYLK+GVVPTTNEITFLR++DL EQQRCE
Sbjct: 355 SQIDEPFLLVIVGEFNSGKSTVINALLGERYLKEGVVPTTNEITFLRYTDL-DIEQQRCE 413
Query: 419 RHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
RHPDGQYICY+P+PILKEM IVDTPGTNVILQRQQRLTEEFVPRADL+LFVISADRPLT
Sbjct: 414 RHPDGQYICYIPAPILKEMTIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPLTG 473
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
SE+ FLRY+QQWKKK VFVLNK+D+YQN ELEEA+SF+K+N +LLN E+V +YPVSAR
Sbjct: 474 SEIAFLRYSQQWKKKAVFVLNKADIYQNNHELEEAMSFIKDNIQRLLNTEDVMLYPVSAR 533
Query: 539 STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLET 598
S LEAKL +S G+ + ELS + SH+ ++F +LE LYSFLDGS+ G +RMRLKLET
Sbjct: 534 SALEAKLMATSNAGRLNEELSTSYSHYGASSFSELENFLYSFLDGSTIPGMDRMRLKLET 593
Query: 599 PIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLID 658
P+ IA+RL+S+CETLV +D + AKQDL ++++++ ++ + M +ES+SWRR TLSLI+
Sbjct: 594 PVAIADRLISACETLVTQDYRYAKQDLAAVEDIVNNVNDFALNMVTESLSWRRPTLSLIE 653
Query: 659 STKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEY 718
+TKSRVV+L+E+ LQ+SN DI+ASY F+GEK+ A+P+TSRIQ+DIIGPA+ QK+L EY
Sbjct: 654 TTKSRVVELVEANLQLSNFDIIASYAFKGEKN-ALPTTSRIQNDIIGPAVSAVQKILEEY 712
Query: 719 TMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASST 778
WL SK ++GR YKESFE RWPSL + Q+ +L++KVD S+VI++FS+ +
Sbjct: 713 ENWLYSKYTQQGRLYKESFEKRWPSLSHESSQINFGTDQLLKKVDQAGSQVIDNFSSIAV 772
Query: 779 SKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPAR 838
SK FEQE+RE+ LGTFG LG AGLSASLLTSVL TTLEDLLALG+CSAGGY+A++ FPAR
Sbjct: 773 SKSFEQEVREMILGTFGQLGVAGLSASLLTSVLQTTLEDLLALGICSAGGYLAISTFPAR 832
Query: 839 RQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQ 898
RQ+VI+KV A+ LA E+EEAM+KDL E + +L+ FV + KPYQD AQ +L+RL EIQ
Sbjct: 833 RQKVIDKVKTKAETLAYELEEAMKKDLTEAIENLDTFVKVLSKPYQDEAQNRLNRLVEIQ 892
Query: 899 DELSNVQEKIQTLQVEIQNLHVS 921
+ELSNV++K++TLQ++IQNLHVS
Sbjct: 893 EELSNVEKKLRTLQIDIQNLHVS 915
>gi|357440747|ref|XP_003590651.1| GTP-binding protein engA [Medicago truncatula]
gi|355479699|gb|AES60902.1| GTP-binding protein engA [Medicago truncatula]
Length = 914
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/907 (61%), Positives = 698/907 (76%), Gaps = 25/907 (2%)
Query: 23 PYFPIPRFKPPPHRTHFPIKSISNDNSFRSEDSAAAPVISEKQQRPRTLYPGGYKRPEIK 82
P+ P R+ P R I+++N+ R ++ Q +PRTL+PGGYKRPE++
Sbjct: 25 PHTPFSRYPHLPFRRTLHSSPITSNNASRHFFPK-----TQAQAQPRTLFPGGYKRPELR 79
Query: 83 VPNVVLQLEPHQVLAGGD-ALDLIDEAVAKFVGIVVLNGG-EASGKSVYEAACLLKSVVK 140
VP ++LQL Q+L G+ ALDLID+AV+K VGIV+L E SG +YEAACLLKS+++
Sbjct: 80 VPTLILQLNSDQILTRGESALDLIDKAVSKSVGIVILTSDDEQSGGKLYEAACLLKSLIR 139
Query: 141 DRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDA 200
DRA L+AERVDIAAA SGVLLSDQGLP +VARNTM S SE VVLPLV R VQT+DA
Sbjct: 140 DRAYLLVAERVDIAAAAVTSGVLLSDQGLPTVVARNTMLGSNSELVVLPLVARFVQTVDA 199
Query: 201 AFNASSSEGADFLVCCFGEGQKADVIE--NSLFTNVKIPIF--IMNAS-PLVDVSKFLKS 255
A NAS SEGADFL+ G G + + ++ NVKIPIF M + + S L S
Sbjct: 200 AVNASKSEGADFLIYGGGGGDLELLNQEIGNVVDNVKIPIFASFMGKNLSYGEASSLLAS 259
Query: 256 GASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSNVKLLDTSNSFFG-KERVA 314
GASGFV SLE LF+D + ++ L++ SN E V
Sbjct: 260 GASGFVTSLESFGLFDDDFQRTLDDRRDKIDDDK----------LVNESNGLQSITEVVG 309
Query: 315 GFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYN 374
GFVK EDREK+LIE ERSVL EAI+VIKKA+PLMEEVSLL DAVSQIDEPFLLVIVGE+N
Sbjct: 310 GFVKLEDREKRLIEMERSVLNEAIEVIKKAAPLMEEVSLLDDAVSQIDEPFLLVIVGEFN 369
Query: 375 SGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPIL 434
SGKS+VINALLG+RYLKDGVVPTTNEITFLR++DL E+QRCER+PDGQYICYLP+PIL
Sbjct: 370 SGKSTVINALLGERYLKDGVVPTTNEITFLRYNDL-DIEKQRCERYPDGQYICYLPAPIL 428
Query: 435 KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKV 494
+EM IVDTPGTNVILQRQQRLTEEFVPRADL+LFVISADRPLT SEV FLRY+QQWKKKV
Sbjct: 429 REMTIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRPLTGSEVAFLRYSQQWKKKV 488
Query: 495 VFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKD 554
VFVLNK+D+YQN ELEEA+SF+K+N +LLN E+V +YPVSARS LEAKL +S+ GK
Sbjct: 489 VFVLNKADIYQNNHELEEAMSFIKDNVKRLLNTEDVVLYPVSARSALEAKLMATSSFGKL 548
Query: 555 HSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLV 614
+ ELSV+ S + N+F +LEK LYSFLDGS+ G +RMRLKLETP+ IA+RL+S+CETLV
Sbjct: 549 NEELSVSGSQYGPNSFYELEKFLYSFLDGSTIAGMDRMRLKLETPVGIADRLISACETLV 608
Query: 615 MKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQI 674
+D + AKQDL N +++S+ ++ + ME+ES+SWR++TLS+I+STKSRVV+L+E+T+Q+
Sbjct: 609 TQDYRCAKQDLAAINNVVNSVNDFALNMENESLSWRKQTLSMIESTKSRVVELVEATMQL 668
Query: 675 SNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYK 734
SNLDIVASYVF+GEK+AA P+TSRIQ+DII P++ QK+LG+Y WL +KN ++GR YK
Sbjct: 669 SNLDIVASYVFKGEKNAA-PATSRIQNDIIDPSVSSVQKILGDYENWLSAKNTQQGRLYK 727
Query: 735 ESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGTF 794
ESFE RW SL++ Q + YEL++K D +VIE+FS+S+ SK FEQE+RE LGTF
Sbjct: 728 ESFEKRWSSLIHENSQKNSETYELLKKGDQAGYQVIENFSSSAVSKSFEQEVRETILGTF 787
Query: 795 GGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLA 854
G LG AG SASLLTSVL TTLEDLLALG+CS GGYIA++NFP+RR+RVI+KV + AD LA
Sbjct: 788 GQLGVAGFSASLLTSVLQTTLEDLLALGICSVGGYIAISNFPSRRRRVIDKVKRKADTLA 847
Query: 855 REIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVE 914
E+EEAM++DL E V +L+ FV +GKPYQD Q +L++L EIQ+E+SN+++K++TLQ++
Sbjct: 848 NELEEAMKRDLTEAVENLDTFVRVIGKPYQDQVQNRLNKLVEIQEEISNIEKKLRTLQID 907
Query: 915 IQNLHVS 921
IQNLHVS
Sbjct: 908 IQNLHVS 914
>gi|145335021|ref|NP_171815.3| FZO-like protein [Arabidopsis thaliana]
gi|92911702|gb|ABE96616.1| FZL [Arabidopsis thaliana]
gi|332189416|gb|AEE27537.1| FZO-like protein [Arabidopsis thaliana]
Length = 912
Score = 1072 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/934 (59%), Positives = 704/934 (75%), Gaps = 41/934 (4%)
Query: 1 MKPLLSLHHAPTRVPAPRFLS--DPYFP-----IPRFKPPPHR--THFPIKSISNDNSFR 51
M+ L+S V +P +S P FP + F PP HR + I++IS++++ +
Sbjct: 1 MRTLISHRQC---VTSPFLISAASPPFPGRCFKLSSFTPPRHRRFSSLSIRNISHESADQ 57
Query: 52 SEDSAAAPVISEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGG--DALDLIDEAV 109
+ S RPRTLYPGGYKRPE+ VP ++L+L+ +V++G + LDL+D A+
Sbjct: 58 TSSS-----------RPRTLYPGGYKRPELAVPGLLLRLDADEVMSGNREETLDLVDRAL 106
Query: 110 AKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGL 169
AK V IVV++GG +GK +YEAACLLKS+VK RA LIAERVDIA+AV ASGV LSD+GL
Sbjct: 107 AKSVQIVVIDGGATAGK-LYEAACLLKSLVKGRAYLLIAERVDIASAVGASGVALSDEGL 165
Query: 170 PAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENS 229
PAIVARNT+ S +SV+LPLV R V+ +D+A ASSSEGADFL+ G G++ + +S
Sbjct: 166 PAIVARNTLMGSNPDSVLLPLVARIVKDVDSALIASSSEGADFLI--LGSGEEDTQVADS 223
Query: 230 LFTNVKIPIFIM--NASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNE 287
L +VKIPI++ + + LKSG SGFVISL+DL D L Q
Sbjct: 224 LLKSVKIPIYVTCRGNEEAKEELQLLKSGVSGFVISLKDLRSSRDVALRQSL-------- 275
Query: 288 KTDRGEDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPL 347
G V N N K+ AGF+K ED++K ++E E+SVL E I++I KA+PL
Sbjct: 276 ---DGAYVVNNHETQNMNELPEKKNSAGFIKLEDKQKLIVEMEKSVLRETIEIIHKAAPL 332
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
MEEVSLLIDAVS+IDEPFL+VIVGE+NSGKS+VINALLGKRYLK+GVVPTTNEITFL +S
Sbjct: 333 MEEVSLLIDAVSRIDEPFLMVIVGEFNSGKSTVINALLGKRYLKEGVVPTTNEITFLCYS 392
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
DL SEEQQRC+ HPDGQY+CYLP+PILK++ IVDTPGTNVILQRQQRLTEEFVPRADL++
Sbjct: 393 DLESEEQQRCQTHPDGQYVCYLPAPILKDINIVDTPGTNVILQRQQRLTEEFVPRADLLV 452
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNI 527
FV+SADRPLTESEV FLRYTQQWKKK VF+LNKSD+Y++A ELEEAISFVKENT KLLN
Sbjct: 453 FVLSADRPLTESEVAFLRYTQQWKKKFVFILNKSDIYRDARELEEAISFVKENTRKLLNT 512
Query: 528 ENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSST 587
ENV +YPVSARS LEAKLS +S VG+D E++ S+WR+ +F++LEK LYSFLD S++T
Sbjct: 513 ENVILYPVSARSALEAKLSTASLVGRDDLEIADPGSNWRVQSFNELEKFLYSFLDSSTAT 572
Query: 588 GKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESI 647
G ER+RLKLETP+ IAERLLSS E LV +DC A++DL A+++I KEY +KME ESI
Sbjct: 573 GMERIRLKLETPMAIAERLLSSVEALVRQDCLAAREDLASADKIISRTKEYALKMEYESI 632
Query: 648 SWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPA 707
SWRR+ LSLID+ + +VV LI +TL++S+LD+ SYVF+GEKSA++ +TS++Q +I+ PA
Sbjct: 633 SWRRQALSLIDNARLQVVDLIGTTLRLSSLDLAISYVFKGEKSASVAATSKVQGEILAPA 692
Query: 708 LLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSS 767
L + ++LLG+Y WLQS AREG +SFEN+WP+ V + Q+ D Y+L++K D S
Sbjct: 693 LTNAKELLGKYAEWLQSNTAREGSLSLKSFENKWPTYVNSKTQLGIDTYDLLQKTDKVSL 752
Query: 768 RVIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAG 827
+ I++ SA +TSK EQ+IREVF T GGLGAAGLSASLLTSVLPTTLEDLLALGLCSAG
Sbjct: 753 KTIQNLSAGTTSKRLEQDIREVFFVTVGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAG 812
Query: 828 GYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAA 887
GY+A+ANFP RRQ +I KVNK+AD LA+++E+AMQKDL + +L NFV V KPY++ A
Sbjct: 813 GYVAIANFPYRRQAIIGKVNKVADALAQQLEDAMQKDLSDATSNLVNFVNIVAKPYREEA 872
Query: 888 QLKLDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
QL+LDRL IQ ELS+++ K+Q LQV+I NLHVS
Sbjct: 873 QLRLDRLLGIQKELSDIRSKLQLLQVDIDNLHVS 906
>gi|242087813|ref|XP_002439739.1| hypothetical protein SORBIDRAFT_09g019290 [Sorghum bicolor]
gi|241945024|gb|EES18169.1| hypothetical protein SORBIDRAFT_09g019290 [Sorghum bicolor]
Length = 922
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/870 (53%), Positives = 623/870 (71%), Gaps = 19/870 (2%)
Query: 65 QQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEAS 124
++ PRTL+PGG+KRPEI+VP +VL++ + L GD + AV++ VGIVVL GE
Sbjct: 59 KEPPRTLFPGGFKRPEIQVPALVLRVGAEEALRCGDE---VAAAVSRGVGIVVLEAGEEG 115
Query: 125 GKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSE 184
G YEAA L++ V DRA LIAERVD+A+AV ASGV+L+D G+PAIVAR+ M S ++
Sbjct: 116 GGRAYEAARALRATVGDRAYLLIAERVDVASAVGASGVVLADDGIPAIVARSMMMKSNAD 175
Query: 185 SVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI---- 240
S+ LP+V R +Q+ ++A +ASSSEGADFL+ G G D++ + +VKIPIF
Sbjct: 176 SIYLPIVARRIQSANSAISASSSEGADFLIVNTGTGDFTDLMNGGVGQHVKIPIFFTLNH 235
Query: 241 MNASPLVD-VSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNE-----KTDRG-- 292
++ D S+ L+SGASG V SL + L D ++ + F + E + G
Sbjct: 236 LSEGTYSDFTSRLLQSGASGVVTSLAGMQLLTDDLIKKYFSKVDSAEEVPRASYSSAGML 295
Query: 293 EDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVS 352
EDV+NV +L K +VAGF K +++ QLIE E+ +L EAI +I+KA+P+MEEV
Sbjct: 296 EDVNNVMVLTRDRE---KTKVAGFTKLDEKVMQLIEIEKPILNEAIAIIRKAAPMMEEVE 352
Query: 353 LLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE 412
LL+DA S++ EPFLLV VGE+NSGKS+ INALLG++YL++GVVPTTNEIT L +S++ SE
Sbjct: 353 LLVDAASRLSEPFLLVTVGEFNSGKSTFINALLGRQYLQEGVVPTTNEITLLSYSEVESE 412
Query: 413 EQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISA 472
+RCERHPDGQ++CYL PILKEM +VDTPGTNVILQRQQRLTEE+VPRADL+LFV+S+
Sbjct: 413 SFERCERHPDGQFMCYLSVPILKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLSS 472
Query: 473 DRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTI 532
DRPLTESEV FL+Y QQWKKKVVFVLNK DLY+N+ ELEEA +FVKEN MKLLN E+VT+
Sbjct: 473 DRPLTESEVGFLQYVQQWKKKVVFVLNKLDLYRNSNELEEATAFVKENAMKLLNAEDVTL 532
Query: 533 YPVSARSTLEAKLSVS-SAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKER 591
+PVS+RS LEAKLS S ++ GK E +D WR + F +LE L SFLD S+ GKER
Sbjct: 533 FPVSSRSALEAKLSYSKNSDGKHLREAMFSDPRWRSSNFCELEDYLLSFLDSSTENGKER 592
Query: 592 MRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRR 651
+RLKLETPI IA+RLL+SC+ LV + + A +DLT +++ Y +K++S+S SW+
Sbjct: 593 VRLKLETPIGIADRLLTSCQRLVKLEYEKAVEDLTSIKDLVYGANNYAIKLKSDSNSWQN 652
Query: 652 KTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDT 711
+ SLI+ K R V L+ STLQ+SN+D++ +Y +G+ ++ +TS +Q+DI+ P L D
Sbjct: 653 QISSLIERAKGRAVTLMGSTLQLSNIDLIFTYTVKGKTGSSTRATSFVQNDILSPTLDDA 712
Query: 712 QKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIE 771
LLG+Y+ WL S N RE + Y E F RW +LV + + D LV + + + + ++
Sbjct: 713 VNLLGDYSTWLSSSNTREAKVYLECFSARWDALVGPEERALLDPNGLVNEGEKLTIKALD 772
Query: 772 DFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIA 831
F+AS+ +K+FE+EIREV GTFGGLG AGLSASLLTSVL TTLEDLLAL LCSAGG+
Sbjct: 773 GFNASAAAKVFEEEIREVAFGTFGGLGIAGLSASLLTSVLSTTLEDLLALALCSAGGFFV 832
Query: 832 VANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKL 891
+++FP RR+ I+KVNK AD L+R+++EA+QKD+ ++ L FV + KPYQ+A Q K+
Sbjct: 833 LSSFPGRRKLAIQKVNKAADELSRKVDEAIQKDISQSANDLIRFVEVISKPYQEACQRKI 892
Query: 892 DRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
D L +Q ELS V+ K+QTL+VEIQNLH S
Sbjct: 893 DWLQGVQGELSAVERKLQTLKVEIQNLHGS 922
>gi|125552200|gb|EAY97909.1| hypothetical protein OsI_19825 [Oryza sativa Indica Group]
Length = 925
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/871 (52%), Positives = 607/871 (69%), Gaps = 27/871 (3%)
Query: 68 PRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKS 127
PRTL+PGG+KRPEI+VP +VL++ + LA GDA+ IVVL G G
Sbjct: 65 PRTLFPGGFKRPEIRVPALVLRVGADEALASGDAVVAAVARGVG---IVVLEAGAEGGGR 121
Query: 128 VYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVV 187
VYEAA LK+ V DRA L+AERVD+A+AV ASGV+L+D G+PAIVAR+ M S S+S+
Sbjct: 122 VYEAALSLKASVGDRAYLLVAERVDVASAVGASGVVLADDGIPAIVARSMMMKSNSDSIY 181
Query: 188 LPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIEN-SLFTNVKIPIFIM----- 241
LPLV R +++ D A +A+SSEGADFL+ G +V+ S +VKIPIF
Sbjct: 182 LPLVARTIRSADTARSATSSEGADFLIIDTGSDDAINVMNGVSGTQHVKIPIFSTLSDSQ 241
Query: 242 -NASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDV----- 295
S + S+ L+SGASG V+SL + + D ++ + F K D E V
Sbjct: 242 SEGSYSDNTSRLLQSGASGIVMSLAGIQVLADDIIERDFS-------KVDTAESVLQANY 294
Query: 296 SNVKLLDTSNSFF----GKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEV 351
S+ L+ +++ K +VAGF K +++ QLI E+ +L EA+ VI+KA+P+MEEV
Sbjct: 295 SSASTLEEADNVMVLTREKAKVAGFTKLDEKVMQLISIEKPILSEAVAVIRKAAPMMEEV 354
Query: 352 SLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS 411
LL+DA S++ EPFLLV VGE+NSGKS+ INALLG++YL++GVVPTTNEI L +SD+ S
Sbjct: 355 ELLVDAASRLSEPFLLVTVGEFNSGKSTFINALLGRKYLQEGVVPTTNEIMLLSYSDVDS 414
Query: 412 EEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVIS 471
E +RCERHPDGQY+CYL +P+LKEM +VDTPGTNVILQRQQRLTEE+VPRADL+LFV+S
Sbjct: 415 ESAERCERHPDGQYMCYLSAPVLKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLS 474
Query: 472 ADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVT 531
+DRPLT+SEV FL+Y QQWKKKVVFVLNK DLY+N+ ELEEA +F+KEN KLLN E+VT
Sbjct: 475 SDRPLTDSEVRFLQYVQQWKKKVVFVLNKLDLYRNSNELEEATAFIKENARKLLNTEDVT 534
Query: 532 IYPVSARSTLEAKLSVSSAVGKDH-SELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKE 590
++PVS+RS LEAKL S G++H E ND WR + F LE L SFLDGS+ GKE
Sbjct: 535 LFPVSSRSALEAKLLYSKNDGREHHGEALFNDPRWRNSKFYDLEHYLLSFLDGSTENGKE 594
Query: 591 RMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWR 650
R+RLKLETPI IA+RLL+SC+ LV + + A DLT +++ Y +K+E++S SW+
Sbjct: 595 RVRLKLETPIGIADRLLTSCQRLVKLEYEKAIDDLTSIKDLVSGANNYAVKIEADSDSWQ 654
Query: 651 RKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLD 710
R+ SLI K R + L+ESTLQ+SN+D++ +Y G KS TS Q+DI+ P+L D
Sbjct: 655 RQISSLIARAKGRAISLMESTLQLSNIDLIFTYTLSGGKSTPTKVTSFFQNDILSPSLDD 714
Query: 711 TQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVI 770
LL EY+ WL S N RE Y + F RW +LV + ++ P+ ELV + + + +
Sbjct: 715 AANLLSEYSTWLSSTNVREANIYVDCFHERWGALVAQEQRIPPEKNELVNEEEKLCVKAL 774
Query: 771 EDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYI 830
+ FSAS+ +K+FE+EIREV GTFGGLG AGLSASLLTSVL +TLEDLLAL LCSAGG+
Sbjct: 775 DGFSASAAAKVFEEEIREVAWGTFGGLGVAGLSASLLTSVLTSTLEDLLALALCSAGGFF 834
Query: 831 AVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLK 890
A++NFP RR+ +EK+ K A+ L+ +++EA+Q+D+ + L +FV V KPYQDA Q K
Sbjct: 835 AISNFPTRRKLAVEKIGKAAEKLSSKVDEAIQQDISRSANQLVHFVETVSKPYQDACQQK 894
Query: 891 LDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
+D L +Q ELS V+ K+QTL+VEIQNLH S
Sbjct: 895 IDWLQGVQGELSTVERKLQTLKVEIQNLHES 925
>gi|357129283|ref|XP_003566294.1| PREDICTED: uncharacterized protein LOC100838168 [Brachypodium
distachyon]
Length = 970
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/869 (53%), Positives = 615/869 (70%), Gaps = 22/869 (2%)
Query: 65 QQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEAS 124
+Q PRTL+PGG+KRPEI+VP +VL++ + L GD + AVA+ VGIVVL GE
Sbjct: 108 KQPPRTLFPGGFKRPEIQVPALVLRVGVDEALGSGDT---VASAVARGVGIVVLEAGEEG 164
Query: 125 GKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSE 184
G YEAA LK+ V DRA LIAERVD+A+AV ASGV+L+D G+PAIVAR+ M S SE
Sbjct: 165 GGRAYEAARALKAAVGDRAYLLIAERVDVASAVGASGVVLADDGIPAIVARSMMMKSNSE 224
Query: 185 SVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIM--- 241
S+ LPLV R VQ+ D+A +ASSSEGADFL+ + I NVKIPIF
Sbjct: 225 SIYLPLVARTVQSSDSARSASSSEGADFLIVNTRTDDFSSAISGVGAQNVKIPIFFTLND 284
Query: 242 ---NASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNE-------KTDR 291
S SK L+SGASG V+SL + D ++ + F TT+
Sbjct: 285 SQSEGSYSDTSSKLLQSGASGIVLSLAGIHHLTDNIIERDFSRVDTTDGVPQATYLSAST 344
Query: 292 GEDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEV 351
E+ +NV +L K +VAGF K +++ +LI E+ +L EA+ VI+KA+P+MEEV
Sbjct: 345 SEETNNVMVLSRE-----KTKVAGFTKLDEKVMELIAMEKPILNEAVAVIRKAAPMMEEV 399
Query: 352 SLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS 411
LL+DA S++ EPFLLVIVGE+NSGKS+ INALLG++YL++GVVPTTNEIT L +S++ S
Sbjct: 400 ELLVDAASRLSEPFLLVIVGEFNSGKSTFINALLGRQYLQEGVVPTTNEITLLSYSEVDS 459
Query: 412 EEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVIS 471
E +RCERHPDGQ+ CYL +PILKEM +VDTPGTNVILQRQQRLTEE+VPRADL+LFV+S
Sbjct: 460 ESMERCERHPDGQFTCYLSAPILKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLS 519
Query: 472 ADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVT 531
+DRPLTESEV FL+Y QQWKKKVVFVLNK DLY+N+ ELEEA +F+KEN KLLN E+VT
Sbjct: 520 SDRPLTESEVGFLQYVQQWKKKVVFVLNKLDLYRNSDELEEATAFIKENARKLLNTEHVT 579
Query: 532 IYPVSARSTLEAKLSVSSAVGKDH-SELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKE 590
++PVS+RS LE KLS S ++H ++ +ND WR + F LE L SFLDGS+ GKE
Sbjct: 580 LFPVSSRSALEVKLSYSKNNDREHYGKVLLNDPRWRSSKFYDLEHYLLSFLDGSTDNGKE 639
Query: 591 RMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWR 650
R+RLKLETPI IA+RLL+SC+ LV + + + DLT +++ Y +K+E++S SW+
Sbjct: 640 RVRLKLETPIGIADRLLTSCQRLVKLEYEKSIDDLTAIKDLVSGANSYAVKIEADSNSWQ 699
Query: 651 RKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLD 710
++ SLI+ KSR + L+ESTLQ+SN+D++++Y+ GEK + +TS +Q+DI+ PAL D
Sbjct: 700 KQISSLIERAKSRAITLMESTLQLSNIDLISTYMLAGEKGTSAKATSFVQNDILSPALDD 759
Query: 711 TQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVI 770
L+GEY+ WL S N RE Y E F RW SL+ + ++ D ELV + + S + +
Sbjct: 760 AVNLMGEYSTWLSSSNIREANLYLECFHERWSSLLTQEERLPSDPNELVNEGEKLSIKAL 819
Query: 771 EDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYI 830
FSA + +K+FE EIREV GTFGGLG AGLSASLLTSVL TTLEDLLAL LCSAGG+
Sbjct: 820 NGFSAYAAAKVFEAEIREVATGTFGGLGVAGLSASLLTSVLTTTLEDLLALALCSAGGFF 879
Query: 831 AVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLK 890
A++NFP RR+ +EKV+K AD L+R+++EA+Q+D+ ++ L FV + KPYQDA Q K
Sbjct: 880 AISNFPGRRKLALEKVSKAADDLSRKVDEAIQEDISQSASKLVQFVDVLSKPYQDACQRK 939
Query: 891 LDRLSEIQDELSNVQEKIQTLQVEIQNLH 919
+D L +Q E+S V+ K+QT +V+IQNLH
Sbjct: 940 IDWLQGVQGEMSAVERKLQTFKVDIQNLH 968
>gi|326522522|dbj|BAK07723.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 967
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/870 (53%), Positives = 617/870 (70%), Gaps = 20/870 (2%)
Query: 65 QQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEAS 124
++ PRTL+PGG+KRPEI+VP +VL++ + L GDA + AVA+ VGIVVL GE
Sbjct: 105 KEPPRTLFPGGFKRPEIQVPALVLRVGVGEALGSGDA---VAAAVARGVGIVVLEAGEEG 161
Query: 125 GKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSE 184
G YEAA LK+ V DRA LIAERVD+A+AV ASGV+L+D G+PAIVAR M S S+
Sbjct: 162 GGRAYEAARALKAAVGDRAYLLIAERVDVASAVGASGVVLADDGIPAIVARGMMMKSNSD 221
Query: 185 SVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIM--- 241
S+ LPLV R +++ D+A +A+SSEGADFL+ G G + + +VKIP+F
Sbjct: 222 SIYLPLVARTIRSSDSAKSATSSEGADFLIVNTGNGDFSSDFNGNGAQHVKIPVFFTIND 281
Query: 242 ---NASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDV--S 296
S S+ +SGASG V+SL + D ++ + F + DR V S
Sbjct: 282 LQSEGSYSDTTSRLFQSGASGIVLSLAGIQHLTDNIIERDFL----KVDAIDRAPQVTYS 337
Query: 297 NVKLLDTSNSFF----GKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVS 352
+ +L+ +N+ K +VAGF K +++ QLI TE+ +L EA+ VI+KA+P+MEE
Sbjct: 338 SASVLEETNNVMVLTREKSKVAGFTKLDEKVMQLIATEKPILSEAVAVIRKAAPMMEEAE 397
Query: 353 LLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE 412
LL+DA S++ EPFLLVIVGE+NSGKS+ INALLG++YL++GVVPTTNEIT L +S++ SE
Sbjct: 398 LLVDAASRLSEPFLLVIVGEFNSGKSTFINALLGRKYLEEGVVPTTNEITLLSYSEVDSE 457
Query: 413 EQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISA 472
+RCERHPDGQ+ CYL +PILKEM +VDTPGTNVILQRQQRLTEE+VPRADL+LFV+S+
Sbjct: 458 SIERCERHPDGQFTCYLSAPILKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLSS 517
Query: 473 DRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTI 532
DRPLTESEV FL+Y QQWKKKVVFVLNK DLY+N ELEEA +F+KEN KLLN E+VT+
Sbjct: 518 DRPLTESEVGFLQYVQQWKKKVVFVLNKLDLYRNNSELEEATAFIKENARKLLNTEDVTL 577
Query: 533 YPVSARSTLEAKLSVSSAVGKDH-SELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKER 591
+PVS+RS LE KLS S ++H E+ ++D WR + F LE L SFLDGS+ GKER
Sbjct: 578 FPVSSRSALEVKLSYSKNNDREHHGEVLLSDPRWRSSKFYDLEHYLLSFLDGSTDNGKER 637
Query: 592 MRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRR 651
+RLKLETPI IA+RLL+SC+ LV + ++A DLT +++ Y +K+E++S SW++
Sbjct: 638 VRLKLETPIGIADRLLTSCQRLVKLEYENAIDDLTSIRDLVSGANSYALKIEADSNSWQK 697
Query: 652 KTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDT 711
+ SLI+ KSR + L+ESTLQ+SN+D++ +Y+ GEK + +T +Q+DI+ PAL D
Sbjct: 698 QISSLIERAKSRAITLMESTLQLSNIDLIFTYMLTGEKGPSAKATLFVQNDILSPALDDA 757
Query: 712 QKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIE 771
LL EY+ WL S N E Y E F RW SLV + +V D ELV + + S ++
Sbjct: 758 VDLLSEYSKWLSSSNTCEANLYLECFHERWDSLVSQEERVSSDPTELVSEGEKLSINALD 817
Query: 772 DFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIA 831
FSA++ +K+FE+EIREV GTFGGLG AGLSASLLTSVL TTLEDLLAL LCSAGG+ A
Sbjct: 818 GFSATAAAKVFEEEIREVATGTFGGLGVAGLSASLLTSVLTTTLEDLLALALCSAGGFFA 877
Query: 832 VANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKL 891
++NFP RR+ +EKV+K AD L+R+++EA+QKD+ ++ L FV KPYQ+A Q K+
Sbjct: 878 ISNFPGRRKLAVEKVSKAADELSRKVDEAIQKDISQSASKLVQFVDTASKPYQEACQRKI 937
Query: 892 DRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
D L +Q ELS V+ K+QTL+V+IQNLH S
Sbjct: 938 DWLQGVQGELSAVERKLQTLKVDIQNLHGS 967
>gi|222631465|gb|EEE63597.1| hypothetical protein OsJ_18414 [Oryza sativa Japonica Group]
Length = 922
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/848 (52%), Positives = 589/848 (69%), Gaps = 27/848 (3%)
Query: 68 PRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKS 127
PRTL+PGG+KRPEI+VP +VL++ + LA GDA+ IVVL GE G
Sbjct: 66 PRTLFPGGFKRPEIRVPALVLRVGADEALASGDAVVAAVARGVG---IVVLEAGEEGGGR 122
Query: 128 VYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVV 187
VYEAA LK+ V DRA L+AERVD+A+AV ASGV+L+D G+PAIVAR+ M S S+S+
Sbjct: 123 VYEAALSLKASVGDRAYLLVAERVDVASAVGASGVVLADDGIPAIVARSMMMKSNSDSIY 182
Query: 188 LPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIEN-SLFTNVKIPIFIM----- 241
LPLV R +++ D A +A+SSEGADFL+ G +V+ S +VKIPIF
Sbjct: 183 LPLVARTIRSADTARSATSSEGADFLIIDTGSDDAINVMNGVSGTQHVKIPIFSTLSDSQ 242
Query: 242 -NASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDV----- 295
S + S+ L+SGASG V+SL + + D ++ + F K D E V
Sbjct: 243 SEGSYSDNTSRLLQSGASGIVMSLAGIQVLADDIIERDFS-------KVDTAESVLQANY 295
Query: 296 SNVKLLDTSNSFF----GKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEV 351
S+ L+ +++ K +VAGF K +++ QLI E+ +L EA+ VI+KA+P+MEEV
Sbjct: 296 SSASTLEEADNVMVLTREKAKVAGFTKLDEKVMQLISIEKPILSEAVAVIRKAAPMMEEV 355
Query: 352 SLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS 411
LL+DA S++ EPFLLV VGE+NSGKS+ INALLG++YL++GVVPTTNEI L +SD+ S
Sbjct: 356 ELLVDAASRLSEPFLLVTVGEFNSGKSTFINALLGRKYLQEGVVPTTNEIMLLSYSDVDS 415
Query: 412 EEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVIS 471
E +RCERHPDGQY+CYL +P+LKEM +VDTPGTNVILQRQQRLTEE+VPRADL+LFV+S
Sbjct: 416 ESAERCERHPDGQYMCYLSAPVLKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLS 475
Query: 472 ADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVT 531
+DRPLT+SEV FL+Y QQWKKKVVFVLNK DLY+N+ ELEEA +F+KEN KLLN E+VT
Sbjct: 476 SDRPLTDSEVGFLQYVQQWKKKVVFVLNKLDLYRNSNELEEATAFIKENARKLLNTEDVT 535
Query: 532 IYPVSARSTLEAKLSVSSAVGKD-HSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKE 590
++PVS+RS LEAKL S G++ H E ND WR + F LE L SFLDGS+ GKE
Sbjct: 536 LFPVSSRSALEAKLLYSKNDGREHHGEALFNDPRWRNSKFYDLEHYLLSFLDGSTENGKE 595
Query: 591 RMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWR 650
R+RLKLETPI IA+RLL+SC+ LV + + A DLT +++ Y +K+E++S SW+
Sbjct: 596 RVRLKLETPIGIADRLLTSCQRLVKLEYEKAIDDLTSIKDLVSGANNYAVKIEADSDSWQ 655
Query: 651 RKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLD 710
R+ SLI K R + L+ESTLQ+SN+D++ +Y G KS TS Q+DI+ P+L D
Sbjct: 656 RQISSLIARAKGRAISLMESTLQLSNIDLIFTYTLSGGKSTPTKVTSFFQNDILSPSLDD 715
Query: 711 TQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVI 770
LL EY+ WL S N RE Y + F RW +LV + ++ P+ ELV + + + +
Sbjct: 716 AANLLSEYSTWLSSTNVREANIYVDCFHERWGALVAQEQRIPPEKNELVNEEEKLCVKAL 775
Query: 771 EDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYI 830
+ FSAS+ +K+FE+EIREV GTFGGLG AGLSASLLTSVL +TLEDLLAL LCSAGG+
Sbjct: 776 DGFSASAAAKVFEEEIREVAWGTFGGLGVAGLSASLLTSVLTSTLEDLLALALCSAGGFF 835
Query: 831 AVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLK 890
A++NFP RR+ +EK+ K A+ L+ +++EA+Q+D+ + L +FV V KPYQDA Q K
Sbjct: 836 AISNFPTRRKLAVEKIGKAAEKLSSKVDEAIQQDISRSANQLVHFVETVSKPYQDACQQK 895
Query: 891 LDRLSEIQ 898
+D L +Q
Sbjct: 896 IDWLQGVQ 903
>gi|4587579|gb|AAD25810.1|AC006550_18 F10O3.1, partial [Arabidopsis thaliana]
Length = 823
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/824 (55%), Positives = 583/824 (70%), Gaps = 74/824 (8%)
Query: 1 MKPLLSLHHAPTRVPAPRFLS--DPYFP-----IPRFKPPPHR--THFPIKSISNDNSFR 51
M+ L+S V +P +S P FP + F PP HR + I++IS++++ +
Sbjct: 39 MRTLISHRQC---VTSPFLISAASPPFPGRCFKLSSFTPPRHRRFSSLSIRNISHESADQ 95
Query: 52 SEDSAAAPVISEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGG--DALDLIDEAV 109
+ S RPRTLYPGGYKRPE+ VP ++L+L+ +V++G + LDL+D A+
Sbjct: 96 TSSS-----------RPRTLYPGGYKRPELAVPGLLLRLDADEVMSGNREETLDLVDRAL 144
Query: 110 AKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGL 169
AK V IVV++GG +GK +YEAACLLKS+VK RA LIAERVDIA+AV ASGV LSD+GL
Sbjct: 145 AKSVQIVVIDGGATAGK-LYEAACLLKSLVKGRAYLLIAERVDIASAVGASGVALSDEGL 203
Query: 170 PAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENS 229
PAIVARNT+ S +SV+LPLV R V+ +D+A ASSSEGADFL+ G G++ + +S
Sbjct: 204 PAIVARNTLMGSNPDSVLLPLVARIVKDVDSALIASSSEGADFLI--LGSGEEDTQVADS 261
Query: 230 LFTNVKIPIFIM--NASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNE 287
L +VKIPI++ + + LKSG SGFVISL+DL D L Q
Sbjct: 262 LLKSVKIPIYVTCRGNEEAKEELQLLKSGVSGFVISLKDLRSSRDVALRQSL-------- 313
Query: 288 KTDRGEDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPL 347
G V N N K+ AGF+K ED++K ++E E+SVL E I++I KA+PL
Sbjct: 314 ---DGAYVVNNHETQNMNELPEKKNSAGFIKLEDKQKLIVEMEKSVLRETIEIIHKAAPL 370
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
MEEVSLLIDAVS+IDEPFL+VIVGE+NSGKS+VINALLGKRYLK+GVVPTTNEITFL +S
Sbjct: 371 MEEVSLLIDAVSRIDEPFLMVIVGEFNSGKSTVINALLGKRYLKEGVVPTTNEITFLCYS 430
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
DL SEEQQRC+ HPDGQYI IVDTPGTNVILQRQQRLTEEFVPRADL++
Sbjct: 431 DLESEEQQRCQTHPDGQYIN-----------IVDTPGTNVILQRQQRLTEEFVPRADLLV 479
Query: 468 FVISADRPLTESEV----------------------VFLRYTQQWKKKVVFVLNKSDLYQ 505
FV+SADRPLTESEV FLRYTQQWKKK VF+LNKSD+Y+
Sbjct: 480 FVLSADRPLTESEVEVTVLLGMEGKVVTRLNAYIKVAFLRYTQQWKKKFVFILNKSDIYR 539
Query: 506 NAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHW 565
+A ELEEAISFVKENT KLLN ENV +YPVSARS LEAKLS +S VG+D E++ S+W
Sbjct: 540 DARELEEAISFVKENTRKLLNTENVILYPVSARSALEAKLSTASLVGRDDLEIADPGSNW 599
Query: 566 RINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDL 625
R+ +F++LEK LYSFLD S++TG ER+RLKLETP+ IAERLLSS E LV +DC A++DL
Sbjct: 600 RVQSFNELEKFLYSFLDSSTATGMERIRLKLETPMAIAERLLSSVEALVRQDCLAAREDL 659
Query: 626 TLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVF 685
A+++I KEY +KME ESISWRR+ LSLID+ + +VV LI +TL++S+LD+ SYVF
Sbjct: 660 ASADKIISRTKEYALKMEYESISWRRQALSLIDNARLQVVDLIGTTLRLSSLDLAISYVF 719
Query: 686 RGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLV 745
+GEKSA++ +TS++Q +I+ PAL + ++LLG+Y WLQS AREG +SFEN+WP+ V
Sbjct: 720 KGEKSASVAATSKVQGEILAPALTNAKELLGKYAEWLQSNTAREGSLSLKSFENKWPTYV 779
Query: 746 YLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREV 789
+ Q+ D Y+L++K D S + I++ SA +TSK EQ+IREV
Sbjct: 780 NSKTQLGIDTYDLLQKTDKVSLKTIQNLSAGTTSKRLEQDIREV 823
>gi|115463679|ref|NP_001055439.1| Os05g0390100 [Oryza sativa Japonica Group]
gi|48926656|gb|AAT47445.1| unknown protein [Oryza sativa Japonica Group]
gi|113578990|dbj|BAF17353.1| Os05g0390100 [Oryza sativa Japonica Group]
gi|215767655|dbj|BAG99883.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 803
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/808 (53%), Positives = 569/808 (70%), Gaps = 24/808 (2%)
Query: 131 AACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPL 190
AA LK+ V DRA L+AERVD+A+AV ASGV+L+D G+PAIVAR+ M S S+S+ LPL
Sbjct: 3 AALSLKASVGDRAYLLVAERVDVASAVGASGVVLADDGIPAIVARSMMMKSNSDSIYLPL 62
Query: 191 VGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIEN-SLFTNVKIPIFIM------NA 243
V R +++ D A +A+SSEGADFL+ G +V+ S +VKIPIF
Sbjct: 63 VARTIRSADTARSATSSEGADFLIIDTGSDDAINVMNGVSGTQHVKIPIFSTLSDSQSEG 122
Query: 244 SPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDV-----SNV 298
S + S+ L+SGASG V+SL + + D ++ + F K D E V S+
Sbjct: 123 SYSDNTSRLLQSGASGIVMSLAGIQVLADDIIERDFS-------KVDTAESVLQANYSSA 175
Query: 299 KLLDTSNSFF----GKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLL 354
L+ +++ K +VAGF K +++ QLI E+ +L EA+ VI+KA+P+MEEV LL
Sbjct: 176 STLEEADNVMVLTREKAKVAGFTKLDEKVMQLISIEKPILSEAVAVIRKAAPMMEEVELL 235
Query: 355 IDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ 414
+DA S++ EPFLLV VGE+NSGKS+ INALLG++YL++GVVPTTNEI L +SD+ SE
Sbjct: 236 VDAASRLSEPFLLVTVGEFNSGKSTFINALLGRKYLQEGVVPTTNEIMLLSYSDVDSESA 295
Query: 415 QRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
+RCERHPDGQY+CYL +P+LKEM +VDTPGTNVILQRQQRLTEE+VPRADL+LFV+S+DR
Sbjct: 296 ERCERHPDGQYMCYLSAPVLKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLSSDR 355
Query: 475 PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYP 534
PLT+SEV FL+Y QQWKKKVVFVLNK DLY+N+ ELEEA +F+KEN KLLN E+VT++P
Sbjct: 356 PLTDSEVGFLQYVQQWKKKVVFVLNKLDLYRNSNELEEATAFIKENARKLLNTEDVTLFP 415
Query: 535 VSARSTLEAKLSVSSAVGKDH-SELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMR 593
VS+RS LEAKL S G++H E ND WR + F LE L SFLDGS+ GKER+R
Sbjct: 416 VSSRSALEAKLLYSKNDGREHHGEALFNDPRWRNSKFYDLEHYLLSFLDGSTENGKERVR 475
Query: 594 LKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKT 653
LKLETPI IA+RLL+SC+ LV + + A DLT +++ Y +K+E++S SW+R+
Sbjct: 476 LKLETPIGIADRLLTSCQRLVKLEYEKAIDDLTSIKDLVSGANNYAVKIEADSDSWQRQI 535
Query: 654 LSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQK 713
SLI K R + L+ESTLQ+SN+D++ +Y G KS TS Q+DI+ P+L D
Sbjct: 536 SSLIARAKGRAISLMESTLQLSNIDLIFTYTLSGGKSTPTKVTSFFQNDILSPSLDDAAN 595
Query: 714 LLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDF 773
LL EY+ WL S N RE Y + F RW +LV + ++ P+ ELV + + + ++ F
Sbjct: 596 LLSEYSTWLSSTNVREANIYVDCFHERWGALVAQEQRIPPEKNELVNEEEKLCVKALDGF 655
Query: 774 SASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVA 833
SAS+ +K+FE+EIREV GTFGGLG AGLSASLLTSVL +TLEDLLAL LCSAGG+ A++
Sbjct: 656 SASAAAKVFEEEIREVAWGTFGGLGVAGLSASLLTSVLTSTLEDLLALALCSAGGFFAIS 715
Query: 834 NFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDR 893
NFP RR+ +EK+ K A+ L+ +++EA+Q+D+ + L +FV V KPYQDA Q K+D
Sbjct: 716 NFPTRRKLAVEKIGKAAEKLSSKVDEAIQQDISRSANQLVHFVETVSKPYQDACQQKIDW 775
Query: 894 LSEIQDELSNVQEKIQTLQVEIQNLHVS 921
L +Q ELS V+ K+QTL+VEIQNLH S
Sbjct: 776 LQGVQGELSTVERKLQTLKVEIQNLHES 803
>gi|224085455|ref|XP_002307580.1| predicted protein [Populus trichocarpa]
gi|222857029|gb|EEE94576.1| predicted protein [Populus trichocarpa]
Length = 604
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/602 (71%), Positives = 493/602 (81%), Gaps = 10/602 (1%)
Query: 66 QRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGG-DALDLIDEAVAKFVGIVVLNGGEAS 124
Q+PRTL+PGGYKRPEIKVPN+VLQL+P V+ GG +ALDLID+AV+K VGIV+LNG
Sbjct: 3 QQPRTLFPGGYKRPEIKVPNIVLQLDPEDVIRGGSEALDLIDKAVSKSVGIVILNGSIGG 62
Query: 125 GKS---VYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDS 181
G S +YEAACL+ SVV+DRA LI ERVDIA AVNASGV+LSDQGLPA+VARN M S
Sbjct: 63 GGSGKSLYEAACLVNSVVRDRAYLLIGERVDIATAVNASGVVLSDQGLPALVARNMMMGS 122
Query: 182 MSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIM 241
+ESVVLPLV R VQT +AA NAS+SEGADFL+ G + DV + F NVKIPIF++
Sbjct: 123 RTESVVLPLVARIVQTPNAALNASNSEGADFLIYVHGPEEDFDVEMSPGFGNVKIPIFVL 182
Query: 242 NASP-----LVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMF-CANGTTNEKTDRGEDV 295
NAS V SKFLK+GASG V+SLEDL LF+D LSQMF + T D E
Sbjct: 183 NASRGEATLSVGASKFLKTGASGLVLSLEDLRLFSDDALSQMFDTLSATGKNFQDDLESF 242
Query: 296 SNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLI 355
S +K +D N K VAGFVK EDREKQLIE ERS+LLEAIDVI+KASPLM E+SL I
Sbjct: 243 SKLKSMDMENDIHEKTTVAGFVKLEDREKQLIEKERSILLEAIDVIQKASPLMGELSLFI 302
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ 415
DAVSQIDEPFLL IVGE+NSGKS+VINALLGKRYL +GVVPTTNEITFLR+S SEEQQ
Sbjct: 303 DAVSQIDEPFLLAIVGEFNSGKSTVINALLGKRYLNEGVVPTTNEITFLRYSKSDSEEQQ 362
Query: 416 RCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
RCERHPDGQYICYLP+PILKEM IVDTPGTNVILQRQQRLTEEFVPRADL+LFVISADRP
Sbjct: 363 RCERHPDGQYICYLPAPILKEMNIVDTPGTNVILQRQQRLTEEFVPRADLLLFVISADRP 422
Query: 476 LTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPV 535
LTESEV FLRYTQQWKKKVVFVLNKSDLY+N+ ELEEA+ F+KENT KLL +V +YP+
Sbjct: 423 LTESEVSFLRYTQQWKKKVVFVLNKSDLYRNSSELEEAMLFIKENTRKLLKTNDVILYPI 482
Query: 536 SARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLK 595
SARS LEAKLS SS +GKD++ELSV+ SH +I+ F +LE+ LYSFLD S++TG ER+RLK
Sbjct: 483 SARSALEAKLSASSDLGKDYTELSVSKSHLKISRFYELEQFLYSFLDASTTTGMERVRLK 542
Query: 596 LETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLS 655
LETPI IAERLLS+CETLV +D Q AKQDLT A E+IDS+KEY +KME+ESISWRRKT+S
Sbjct: 543 LETPIAIAERLLSACETLVKQDSQLAKQDLTSATELIDSVKEYAIKMENESISWRRKTMS 602
Query: 656 LI 657
L+
Sbjct: 603 LV 604
>gi|145323726|ref|NP_001077452.1| FZO-like protein [Arabidopsis thaliana]
gi|51970736|dbj|BAD44060.1| hypothetical protein [Arabidopsis thaliana]
gi|110743620|dbj|BAE99647.1| hypothetical protein [Arabidopsis thaliana]
gi|332189417|gb|AEE27538.1| FZO-like protein [Arabidopsis thaliana]
Length = 740
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/733 (57%), Positives = 545/733 (74%), Gaps = 41/733 (5%)
Query: 1 MKPLLSLHHAPTRVPAPRFLS--DPYFP-----IPRFKPPPHR--THFPIKSISNDNSFR 51
M+ L+S V +P +S P FP + F PP HR + I++IS++++ +
Sbjct: 1 MRTLISHRQC---VTSPFLISAASPPFPGRCFKLSSFTPPRHRRFSSLSIRNISHESADQ 57
Query: 52 SEDSAAAPVISEKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGG--DALDLIDEAV 109
+ S RPRTLYPGGYKRPE+ VP ++L+L+ +V++G + LDL+D A+
Sbjct: 58 TSSS-----------RPRTLYPGGYKRPELAVPGLLLRLDADEVMSGNREETLDLVDRAL 106
Query: 110 AKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGL 169
AK V IVV++GG +GK +YEAACLLKS+VK RA LIAERVDIA+AV ASGV LSD+GL
Sbjct: 107 AKSVQIVVIDGGATAGK-LYEAACLLKSLVKGRAYLLIAERVDIASAVGASGVALSDEGL 165
Query: 170 PAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENS 229
PAIVARNT+ S +SV+LPLV R V+ +D+A ASSSEGADFL+ G G++ + +S
Sbjct: 166 PAIVARNTLMGSNPDSVLLPLVARIVKDVDSALIASSSEGADFLI--LGSGEEDTQVADS 223
Query: 230 LFTNVKIPIFIM--NASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNE 287
L +VKIPI++ + + LKSG SGFVISL+DL D L Q
Sbjct: 224 LLKSVKIPIYVTCRGNEEAKEELQLLKSGVSGFVISLKDLRSSRDVALRQSL-------- 275
Query: 288 KTDRGEDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPL 347
G V N N K+ AGF+K ED++K ++E E+SVL E I++I KA+PL
Sbjct: 276 ---DGAYVVNNHETQNMNELPEKKNSAGFIKLEDKQKLIVEMEKSVLRETIEIIHKAAPL 332
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
MEEVSLLIDAVS+IDEPFL+VIVGE+NSGKS+VINALLGKRYLK+GVVPTTNEITFL +S
Sbjct: 333 MEEVSLLIDAVSRIDEPFLMVIVGEFNSGKSTVINALLGKRYLKEGVVPTTNEITFLCYS 392
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
DL SEEQQRC+ HPDGQY+CYLP+PILK++ IVDTPGTNVILQRQQRLTEEFVPRADL++
Sbjct: 393 DLESEEQQRCQTHPDGQYVCYLPAPILKDINIVDTPGTNVILQRQQRLTEEFVPRADLLV 452
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNI 527
FV+SADRPLTESEV FLRYTQQWKKK VF+LNKSD+Y++A ELEEAISFVKENT KLLN
Sbjct: 453 FVLSADRPLTESEVAFLRYTQQWKKKFVFILNKSDIYRDARELEEAISFVKENTRKLLNT 512
Query: 528 ENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSST 587
ENV +YPVSARS LEAKLS +S VG+D E++ S+WR+ +F++LEK LYSFLD S++T
Sbjct: 513 ENVILYPVSARSALEAKLSTASLVGRDDLEIADPGSNWRVQSFNELEKFLYSFLDSSTAT 572
Query: 588 GKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESI 647
G ER+RLKLETP+ IAERLLSS E LV +DC A++DL A+++I KEY +KME ESI
Sbjct: 573 GMERIRLKLETPMAIAERLLSSVEALVRQDCLAAREDLASADKIISRTKEYALKMEYESI 632
Query: 648 SWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPA 707
SWRR+ LSLID+ + +VV LI +TL++S+LD+ SYVF+GEKSA++ +TS++Q +I+ PA
Sbjct: 633 SWRRQALSLIDNARLQVVDLIGTTLRLSSLDLAISYVFKGEKSASVAATSKVQGEILAPA 692
Query: 708 LLDTQKLLGEYTM 720
L + + + Y++
Sbjct: 693 LTNAKVSVMLYSL 705
>gi|34365773|gb|AAQ65198.1| At1g03160 [Arabidopsis thaliana]
Length = 642
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/639 (60%), Positives = 485/639 (75%), Gaps = 31/639 (4%)
Query: 25 FPIPRFKPPPHR--THFPIKSISNDNSFRSEDSAAAPVISEKQQRPRTLYPGGYKRPEIK 82
F + F PP HR + I++IS++++ ++ S RPRTLYPGGYKRPE+
Sbjct: 29 FKLSSFTPPRHRRFSSLSIRNISHESADQTSSS-----------RPRTLYPGGYKRPELA 77
Query: 83 VPNVVLQLEPHQVLAGG--DALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVK 140
VP ++L+L+ +V++G + LDL+D A+AK V IVV++GG +GK +YEAACLLKS+VK
Sbjct: 78 VPGLLLRLDADEVMSGNREETLDLVDRALAKSVQIVVIDGGATAGK-LYEAACLLKSLVK 136
Query: 141 DRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDA 200
RA LIAERVDIA+AV ASGV LSD+GLPAIVARNT+ S +SV+LPLV R V+ +D+
Sbjct: 137 GRAYLLIAERVDIASAVGASGVALSDEGLPAIVARNTLMGSNPDSVLLPLVARIVKDVDS 196
Query: 201 AFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIM--NASPLVDVSKFLKSGAS 258
A ASSSEGADFL+ G G++ + +SL +VKIPI++ + + LKSG S
Sbjct: 197 ALIASSSEGADFLI--LGSGEEDTQVADSLLKSVKIPIYVTCRGNEEAKEELQLLKSGVS 254
Query: 259 GFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSNVKLLDTSNSFFGKERVAGFVK 318
GFVISL+DL D L Q G V N N K+ AGF+K
Sbjct: 255 GFVISLKDLRSSRDVALRQSL-----------DGAYVVNNHETQNMNELPEKKNSAGFIK 303
Query: 319 FEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
ED++K ++E E+SVL E I++I KA+PLMEEVSLLIDAVS+IDEPFL+VIVGE+NSGKS
Sbjct: 304 LEDKQKLIVEMEKSVLRETIEIIHKAAPLMEEVSLLIDAVSRIDEPFLMVIVGEFNSGKS 363
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMI 438
+VINALLGKRYLK+GVVPTTNEITFL +SDL SEEQQRC+ HPDGQY+CYLP+PILK++
Sbjct: 364 TVINALLGKRYLKEGVVPTTNEITFLCYSDLESEEQQRCQTHPDGQYVCYLPAPILKDIN 423
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
IVDTPGTNVILQRQQRLTEEFVPRADL++FV+SADRPLTESEV FLRYTQQWKKK VF+L
Sbjct: 424 IVDTPGTNVILQRQQRLTEEFVPRADLLVFVLSADRPLTESEVAFLRYTQQWKKKFVFIL 483
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
NKSD+Y++A ELEEAISFVKENT KLLN ENV +YPVSARS LEAKLS +S VG+D E+
Sbjct: 484 NKSDIYRDARELEEAISFVKENTRKLLNTENVILYPVSARSALEAKLSTASLVGRDDLEI 543
Query: 559 SVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDC 618
+ S+WR+ +F++LEK LYSFLD S++TG ER+RLKLETP+ IAERLLSS E LV +DC
Sbjct: 544 ADPGSNWRVQSFNELEKFLYSFLDSSTATGMERIRLKLETPMAIAERLLSSVEALVRQDC 603
Query: 619 QDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLI 657
A++DL A+++I KEY +KME ESISWRR+ LSL+
Sbjct: 604 LAAREDLASADKIISRTKEYALKMEYESISWRRQALSLV 642
>gi|413945230|gb|AFW77879.1| hypothetical protein ZEAMMB73_997279, partial [Zea mays]
Length = 794
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/738 (52%), Positives = 523/738 (70%), Gaps = 19/738 (2%)
Query: 65 QQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEAS 124
++ PRTL+PGG+KRPEI+VP +VL++ + L GD + +AV++ VGIVVL GE
Sbjct: 54 KEPPRTLFPGGFKRPEIQVPALVLRVGTEEALRCGDE---VADAVSRGVGIVVLEAGEEG 110
Query: 125 GKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSE 184
G YEAA L++ V DRA LIAERVD+A+AV ASGV+L+D G+PAIVAR+ M S ++
Sbjct: 111 GGRSYEAARALRATVGDRAYLLIAERVDVASAVGASGVVLADDGIPAIVARSMMMKSNAD 170
Query: 185 SVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI---- 240
S+ LP+V R +Q+ ++A +ASSSEGADFL+ G G DVI + + +VKIPIF+
Sbjct: 171 SIYLPIVARRIQSANSALSASSSEGADFLIVNTGSGDFVDVINDVVGQHVKIPIFVTLNH 230
Query: 241 MNASPLVD-VSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRG------- 292
++ D S+ L+SGASG V SL + L ND ++ + F G+ E
Sbjct: 231 LSEGTYSDFTSRLLQSGASGVVTSLAGMELLNDDLIKKDFTKVGSAEELPQASYSSAGML 290
Query: 293 EDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVS 352
EDV+NV +L K +VAGF K ++ +LIE E+ +L EAI +I+KA+P+MEEV
Sbjct: 291 EDVNNVMVLTRDCE---KTKVAGFTKLDEEVIKLIEIEKPILNEAITIIRKAAPMMEEVE 347
Query: 353 LLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE 412
LL+DA S++ EPFLLVIVGE+NSGKS+ INALLG++YL++GVVPTTNEIT L +S++ SE
Sbjct: 348 LLVDAASRLSEPFLLVIVGEFNSGKSTFINALLGRQYLQEGVVPTTNEITLLSYSEVESE 407
Query: 413 EQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISA 472
+RCERHPDGQ++CYL PILKEM +VDTPGTNVILQRQQRLTEE+VPRADLVLFV+S+
Sbjct: 408 NFERCERHPDGQFMCYLSVPILKEMNLVDTPGTNVILQRQQRLTEEYVPRADLVLFVLSS 467
Query: 473 DRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTI 532
DRPLTESEV FL+Y QQWKKKVVF+LNK DLY+N+ ELEEA +FVKEN MKLL E+VT+
Sbjct: 468 DRPLTESEVGFLQYVQQWKKKVVFILNKLDLYRNSNELEEATAFVKENAMKLLTAEDVTL 527
Query: 533 YPVSARSTLEAKLSVS-SAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKER 591
+PVS+RS LEAKLS S ++ GK +E ND WR + F +LE L SFLD S+ GKER
Sbjct: 528 FPVSSRSALEAKLSYSKNSDGKHSTEAMYNDPRWRSSKFFELEDYLLSFLDSSTENGKER 587
Query: 592 MRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRR 651
+RLKLETPI IA+RLL+SC+ LV + + A +DL +++ Y +K++S+S SW+
Sbjct: 588 VRLKLETPIGIADRLLTSCQRLVKLEYEKAVEDLASIKDLVYGANNYAIKLKSDSSSWQN 647
Query: 652 KTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDT 711
+ SLI+ K R V L+ESTLQ+SN+D++ +Y +G+ ++M +TS +Q+DI+ P L D
Sbjct: 648 QISSLIERAKGRAVTLMESTLQLSNIDLIFAYTIKGKTGSSMRATSFVQNDILSPTLDDA 707
Query: 712 QKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIE 771
LLG+Y+ WL S N RE Y E F RW +LV + + D LV + + + + +E
Sbjct: 708 VNLLGDYSTWLSSSNTREANVYLECFCERWDALVAPEERALLDPNGLVNEGEKLTIKALE 767
Query: 772 DFSASSTSKMFEQEIREV 789
F+AS+ +K FE+EIRE+
Sbjct: 768 GFNASAAAKDFEEEIREL 785
>gi|168044515|ref|XP_001774726.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673881|gb|EDQ60397.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 823
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 347/822 (42%), Positives = 523/822 (63%), Gaps = 42/822 (5%)
Query: 125 GKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSE 184
G +Y+A C+LK++++ RA LI+ERVDIAAA A GVLL+D+GLPA+VAR M++S E
Sbjct: 14 GAKLYDAGCMLKTMLRGRAELLISERVDIAAASGADGVLLTDEGLPAVVARRMMQNSGLE 73
Query: 185 SVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIMNAS 244
+ LPLV R V ++ +A A++ EGAD L+ + +K+ I + + IP+F+ +
Sbjct: 74 TPALPLVARCVSSVQSALTATAGEGADLLILKVSDKEKS--IVKGVCDGITIPVFLDISG 131
Query: 245 PLVDVSK----FLKSGASGFVISLEDLSLFNDGVLS----------QMFCANGTTNEKTD 290
V S L+ GA+G V++ D+ +G L ++ N T E ++
Sbjct: 132 SGVAHSDTGMDLLQDGANGLVLNTIDIRKAGEGDLPSFVSSLIASIKLAIKNRTEMEDSN 191
Query: 291 RGEDVSNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEE 350
E + +D +E A F ED+ K +++ E +L + I +K+ASP MEE
Sbjct: 192 LPEKRVQTRDVDV------EEDGAFFELSEDKAKLILDEEHVLLQDMIAFVKEASPDMEE 245
Query: 351 VSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLA 410
VSLL+DA+ Q+DE FL VIVGE+NSGKSS+INALLG RYLK+GV+PTTNEIT LR ++
Sbjct: 246 VSLLVDALKQLDELFLSVIVGEFNSGKSSIINALLGDRYLKEGVLPTTNEITLLRHANDG 305
Query: 411 SEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI 470
++R ERHPDG ++ +LP+ +LK+M +VDTPGTNVILQRQQRLTEEFVPRADLVLFV+
Sbjct: 306 EVTEEREERHPDGHFLRFLPASLLKQMNLVDTPGTNVILQRQQRLTEEFVPRADLVLFVL 365
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENV 530
SADR LTESEV FLRY +QW KKVVF+LNK+D E+EE +FV++N +LL++E
Sbjct: 366 SADRALTESEVTFLRYIRQWGKKVVFILNKTDALATYSEVEEVRNFVRDNAQRLLSVEQT 425
Query: 531 TIYPVSARSTLEAKLSVSSAVGK-DHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGK 589
IYPVSAR L+AKLS G D + LS D W + F +LE+ ++ F+ SS G
Sbjct: 426 VIYPVSARQALQAKLSAQLEDGSVDVARLS-EDPLWITSGFKELEEFIFGFMGASSERGA 484
Query: 590 ERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISW 649
ER+RLKLETP+ I+ LL++C+ + + A+ DL +++ L+ + M + +I
Sbjct: 485 ERLRLKLETPLGISVALLAACDQQLAAEAFKAESDLKALEDVLKQLQRFEEAMLNGAILQ 544
Query: 650 RRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALL 709
R++TL+++ + K R K ++S L++SN++ V Y+ ++ +MP +S +IG A+
Sbjct: 545 RQRTLAVV-TAKGRATKFVDSILRLSNVEAVRKYLLGSSRAQSMPVSSGFDSKVIGSAVT 603
Query: 710 DTQKLLGEYTMWLQSKNAREGRRYKESFENRWPS-------------LVYLQPQVYPDMY 756
+TQK L E+ W++S + R+ Y+ +RWP LV L+ +
Sbjct: 604 ETQKSLEEHKDWIESNSNRQLSSYRSLIMSRWPQAKEEYGSSADSLPLVELRNR----DT 659
Query: 757 ELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLE 816
EL+ + + S V++DF ++ + + EQE +EV TF G+G AG+SAS+LTS+LPTTLE
Sbjct: 660 ELMAEQNNSSLTVLKDFDTNAAAILLEQECKEVVFSTFSGVGVAGISASVLTSILPTTLE 719
Query: 817 DLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFV 876
DL+ALG+CSAGG + V N P++R+ +KV ++AD A++IEEAM+ DLQ+++ +
Sbjct: 720 DLIALGVCSAGGLVGVWNLPSQREAAKKKVRRVADSFAKQIEEAMKDDLQKSIDAVRAEF 779
Query: 877 TKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNL 918
+ PY++AA+ KL R+ +Q+EL + +++ L+ +Q++
Sbjct: 780 QTLAAPYRNAAEEKLRRVKILQEELLKLDTELKRLRQSVQSI 821
>gi|168057682|ref|XP_001780842.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667698|gb|EDQ54321.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 839
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 347/840 (41%), Positives = 519/840 (61%), Gaps = 50/840 (5%)
Query: 121 GEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKD 180
G G +Y+A C+LK++++ RA LIAERVDIAAA A GVLL+D+GLPA+VAR M++
Sbjct: 10 GGLGGARLYDAGCMLKTMLRGRAELLIAERVDIAAASGADGVLLTDEGLPAVVARRMMQN 69
Query: 181 SMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI 240
S E+ VLPLV R V ++ +A A++ EGAD L+ + +K V + + IP+F+
Sbjct: 70 SGLETSVLPLVARCVSSVQSAQTATAGEGADLLILEVNDKEKNLV--KGVCDGISIPVFL 127
Query: 241 MNASPLVDVSK----FLKSGASGFVISLEDLSLFNDGVLSQMFCA-NGTTNEKTDRGEDV 295
+ V +K FL+ GA+G V+S ++ G L + + N +R +++
Sbjct: 128 EISGSGVASAKIGTDFLQDGANGLVLSTAAITKNGGGDLPNYVSSLVASVNLAIERRKEM 187
Query: 296 SN---------VKLLDTSN--SFFGKERVAGFVKFEDREKQ-------LIETERSVLLEA 337
N +K D + + G + + E +++ ER++L
Sbjct: 188 ENSYSPEKEKEIKDFDVEDGGALLGLTEDVAVINLDMEEDSVKKKSKKIVDEERALLTAM 247
Query: 338 IDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPT 397
+D ++ ASP MEEVSLL+DA+ Q+DE FL V+VGE+NSGKSS+INALLGKRYLK+GV+PT
Sbjct: 248 VDFVEDASPEMEEVSLLVDALKQLDELFLSVVVGEFNSGKSSIINALLGKRYLKEGVLPT 307
Query: 398 TNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTE 457
TNEIT LR S + ++R ERHPDG ++ +LP+ ILK+M +VDTPGTNVILQRQQRLTE
Sbjct: 308 TNEITVLRHSTDGGDAEEREERHPDGHFLRFLPANILKQMNLVDTPGTNVILQRQQRLTE 367
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
EFVPRADL+LFV+SADR LTESEV FLRY +QW KK+VF+LNKSD+ E+EE +FV
Sbjct: 368 EFVPRADLILFVLSADRALTESEVTFLRYIKQWGKKIVFILNKSDVLPTYNEVEEVRNFV 427
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGK-DHSELSVNDSHWRINTFDKLEKL 576
++N +LL +E +YPVSAR L+AKLS G D + LS D W + F +LE+
Sbjct: 428 RDNAQRLLTVEQALVYPVSARQALQAKLSALLEDGTVDVARLS-EDPLWTTSGFKELEEF 486
Query: 577 LYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
++ F+ S+ G ER+RLKLETP+ I+ LL++CE + + A+ DL + ++ L+
Sbjct: 487 IFGFMGASTDRGAERLRLKLETPLGISFALLAACEQQLTAEASKAESDLKVLEDVRKRLQ 546
Query: 637 EYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPST 696
++ M + +I R L++I++ K R K ++S L++SN++ + Y+ +MP +
Sbjct: 547 KFEEAMLNGAILQRLSILAVIEAVKGRAEKFVDSILRLSNVEAIGKYLLGSGGVRSMPVS 606
Query: 697 SRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPS------------- 743
S +IG A+ D +K L EY W++S + R+ Y+ +RWP
Sbjct: 607 SGFDSKVIGSAVTDVEKALKEYKEWMESNSIRQLSSYRSLIISRWPQVKEDSQHNVESSP 666
Query: 744 LVYLQPQVYPDMYELVRKVDGYSSR---VIEDFSASSTSKMFEQEIREVFLGTFGGLGAA 800
+V L+ + M E SSR + DF ++ + EQE +EV + F G+GAA
Sbjct: 667 VVDLRNRDSKHMAE-------QSSRSLTTLMDFDTNAAIILLEQEFKEVVVSIFSGVGAA 719
Query: 801 GLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEA 860
G+SAS+LTS+LPTTLEDL+ALG+CSAGG + V P++R+ V +KV ++AD LAR+IEEA
Sbjct: 720 GISASVLTSILPTTLEDLIALGVCSAGGLVGVWKLPSQREVVKKKVRRVADSLARQIEEA 779
Query: 861 MQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNLHV 920
M+ DLQ+++ + V + PY +A + KL R+ +Q+E + +++ L+ +Q++ +
Sbjct: 780 MKDDLQKSIDAVRAEVETLTAPYLNAVEEKLRRVEILQEESQKLDSELKRLRQSVQSIGI 839
>gi|302782047|ref|XP_002972797.1| hypothetical protein SELMODRAFT_413416 [Selaginella moellendorffii]
gi|300159398|gb|EFJ26018.1| hypothetical protein SELMODRAFT_413416 [Selaginella moellendorffii]
Length = 904
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 360/928 (38%), Positives = 535/928 (57%), Gaps = 46/928 (4%)
Query: 6 SLHHAPTRV-PAPRFLSDPYFPIPRFKPPPHRTHFPIKSISNDNSFRSEDSAAAPVI--S 62
S HA R+ AP S IP P + ++++S +S RS A + +
Sbjct: 6 SAAHAVARIHAAPSTSSQQICQIPLPSTAPLQIPALLRNLSFSHS-RSHKRAPGSCVLAT 64
Query: 63 EKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALD-LIDEAVAKFVGIVVLNGG 121
++PGG +R +++P + L+L+ +L G+ ++D AVA + +V+L G
Sbjct: 65 NAAAASAGVFPGGTRRASVRLPGLGLRLKAEDILEDGEEKKAVLDSAVAAGLNLVILEDG 124
Query: 122 EASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDS 181
+ Y+AA ++ S+V+ RA LI ERVDIAAA ++GV+LSDQGLP++VAR M+++
Sbjct: 125 KEDSLRFYDAARIVMSIVRGRADVLIVERVDIAAAAGSNGVVLSDQGLPSVVARRMMQNA 184
Query: 182 MSESVVLPLVGRNVQTLDAAFNASSSEGADFLV--CCFGEGQKADVIENSLFTNVKIPIF 239
M E+VVLPLV R V + +A A+ +EGADFL+ C A + + VKIP+F
Sbjct: 185 MPEAVVLPLVARRVTSYQSAEIATITEGADFLLLQCEQASSASAKALVEGICKRVKIPVF 244
Query: 240 IMNASPLVDVSKFLKSGASGFVI----SLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDV 295
+ A D K LK GA G ++ + ++S F + S++ + T K+ +G
Sbjct: 245 LEWARQEEDAVKLLKVGAGGIILDSLPAAAEVSSFVTDLASKVASSVYT---KSGKG--- 298
Query: 296 SNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLI 355
+ L A E + K LIE ER +L A+++IK+ASP MEEV LL+
Sbjct: 299 --LSLNGEGAKSSSTAAAAVLSSIEQQAKLLIEEERPILTSAVEIIKEASPQMEEVGLLV 356
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ 415
DAV Q++E FLLV+VGE+NSGKSSVINALLG R+LK GV+PTTNEIT L++SD + EE
Sbjct: 357 DAVKQLEELFLLVVVGEFNSGKSSVINALLGDRFLKQGVLPTTNEITLLKYSDESYEE-- 414
Query: 416 RCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
R RHPDG + YL + +LK+M +VDTPGTNVILQRQQRLTEEFVPRADLVLFVI A+RP
Sbjct: 415 RPARHPDGHLMRYLSAGLLKQMNLVDTPGTNVILQRQQRLTEEFVPRADLVLFVIGAERP 474
Query: 476 LTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA----FELEEAISFVKENTMKLLNIENVT 531
LTESE F +++ D+ + F +EE FV +N +LLNIE
Sbjct: 475 LTESEA---------SSHTSFCISRFDVIRLLSGFFFTVEEVRRFVADNVRQLLNIEAAM 525
Query: 532 IYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKER 591
I+P+SAR L AK+ K+ D W + FDKLE+ + FL GSS G ER
Sbjct: 526 IFPISARKALHAKVKAKQLESKNLE----RDPLWTASGFDKLEQYVLDFLGGSSDAGAER 581
Query: 592 MRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRR 651
+RLKLETPI IA LLS+ V D + + D + +EM D Y + + +
Sbjct: 582 IRLKLETPIGIAAALLSAARKQVEADAANNEVDQKVLDEMEDQFTSYKQLLGTNVDLQVQ 641
Query: 652 KTLSLIDSTKSRVVKLIESTLQISNLDIVASYVF-RGEKSAAMPSTSRIQHDIIGPALLD 710
++ + +R +K ++ LQ++++D + Y+ R E S+A +T + +IIG AL D
Sbjct: 642 LVITAVAEATARALKFVDKRLQVTSVDTASKYLLPRNETSSAGAAT--FEREIIGTALSD 699
Query: 711 TQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVI 770
+ + ++ +W+ R+ +Y E ++RWP +V D + G S +
Sbjct: 700 VKNAIEDHKLWVTLNTQRQLEKYVEIGKSRWPD-----TEVVTDSWSENVSFSGRSLTAL 754
Query: 771 EDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYI 830
++F + + + EQE+RE TF LG AG SASLLTSVLPTTLEDL+ALGLCSAGG +
Sbjct: 755 DEFDVKAANLLLEQELREAVFSTFESLGIAGASASLLTSVLPTTLEDLIALGLCSAGGLV 814
Query: 831 AVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLK 890
++ + R+ + KV ++A L+ ++EE M+ +LQE++ +E+ V + PY+ + +
Sbjct: 815 SIFKLSSLREEIKRKVEQVAQSLSLKLEEEMKAELQESIQSIESSVLQFTAPYRSLVEKE 874
Query: 891 LDRLSEIQDELSNVQEKIQTLQVEIQNL 918
R++ +Q++L + +++Q L+ IQNL
Sbjct: 875 STRIAAVQEKLVVIDKELQMLRKNIQNL 902
>gi|302805244|ref|XP_002984373.1| hypothetical protein SELMODRAFT_445893 [Selaginella moellendorffii]
gi|300147761|gb|EFJ14423.1| hypothetical protein SELMODRAFT_445893 [Selaginella moellendorffii]
Length = 905
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 360/925 (38%), Positives = 536/925 (57%), Gaps = 39/925 (4%)
Query: 6 SLHHAPTRV-PAPRFLSDPYFPIPRFKPPPHRTHFPIKSISNDNSFRSEDSAAAPVI--S 62
S HA R+ AP S IP P + ++++S +S RS A + +
Sbjct: 6 SAAHAVARIHAAPSTSSQQICQIPLPSTAPLQIPALLRNLSFSHS-RSHKRAPGSCVLAT 64
Query: 63 EKQQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALD-LIDEAVAKFVGIVVLNGG 121
++PGG +R +++P + L+L+ +L G+ ++D AVA + +V+L G
Sbjct: 65 NAAAASAGVFPGGTRRASVRLPGLGLRLKAEDILEDGEEKKAVLDSAVAAGLNLVILEDG 124
Query: 122 EASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDS 181
+ Y+AA ++ S+V+ RA LI ERVDIAAA ++GV+LSDQGLP++VAR M+++
Sbjct: 125 KEDSLRFYDAARIVMSIVRGRADVLIVERVDIAAAAGSNGVVLSDQGLPSVVARRMMQNA 184
Query: 182 MSESVVLPLVGRNVQTLDAAFNASSSEGADFLV--CCFGEGQKADVIENSLFTNVKIPIF 239
M E+VVLPLV R V + +A A+ +EGADFL+ C A + + VKIP+F
Sbjct: 185 MPEAVVLPLVARRVTSYQSAEIATITEGADFLLLQCEQASSASAKALVEGICKRVKIPVF 244
Query: 240 IMNASPLVDVSKFLKSGASGFVI----SLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDV 295
+ A D K LK GA G ++ + ++S F + S++ + T K+ +G
Sbjct: 245 LEWARQEEDAVKLLKVGAGGIILDSLPAAAEVSSFVTDLASKVASSVYT---KSGKG--- 298
Query: 296 SNVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLI 355
+ L A E + K LIE ER +L A+++IK+ASP MEEV LL+
Sbjct: 299 --LSLNGEGAKSSSTAAAAVLSSIEQQAKLLIEEERPILTSAVEIIKEASPQMEEVGLLV 356
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ 415
DAV Q++E FLLV+VGE+NSGKSSVINALLG R+LK GV+PTTNEIT L++SD + EE
Sbjct: 357 DAVKQLEELFLLVVVGEFNSGKSSVINALLGDRFLKQGVLPTTNEITLLKYSDESYEE-- 414
Query: 416 RCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
R RHPDG + YL + +LK+M +VDTPGTNVILQRQQRLTEEFVPRADLVLFVI A+RP
Sbjct: 415 RPARHPDGHLMRYLSAGLLKQMNLVDTPGTNVILQRQQRLTEEFVPRADLVLFVIGAERP 474
Query: 476 LTESEVV-FLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYP 534
LTESE + + V+ +L S + +EE FV +N +LLNIE I+P
Sbjct: 475 LTESEASSHTSFPPISRFDVIRLL--SGFFST---VEEVRRFVADNVRQLLNIEAAMIFP 529
Query: 535 VSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRL 594
+SAR L AK+ K+ D W + FDKLE+ + FL GSS G ER+RL
Sbjct: 530 ISARKALHAKVKAKQLESKNLE----RDPLWTASGFDKLEQYVLDFLGGSSDAGAERIRL 585
Query: 595 KLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTL 654
KLETPI IA LLS+ V D ++ + D + +EM D Y + + ++ +
Sbjct: 586 KLETPIGIAAALLSAARKQVEADAENNEVDRKVLDEMEDQFTSYKQLLGTNVDLQVQRVI 645
Query: 655 SLIDSTKSRVVKLIESTLQISNLDIVASYVF-RGEKSAAMPSTSRIQHDIIGPALLDTQK 713
+ + +R +K ++ LQ++++D + Y+ R E S+A +T + +IIG AL D +
Sbjct: 646 TAVAEATARALKFVDKRLQVTSVDTASKYLLPRNETSSAGAAT--FEREIIGTALSDVKN 703
Query: 714 LLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDF 773
+ ++ +W+ R+ +Y E ++RWP +V D + G S +++F
Sbjct: 704 AIEDHKLWVTLNTQRQLEKYVEIGKSRWP-----DTEVVTDSWSENVSFSGRSLTALDEF 758
Query: 774 SASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVA 833
+ + EQE+RE TFG LG AG SAS LTSVLPTTLEDL+ALGLCSAGG +++
Sbjct: 759 DVKAADLLLEQELREAVFSTFGSLGIAGASASFLTSVLPTTLEDLIALGLCSAGGLVSIF 818
Query: 834 NFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDR 893
+ R+ + KV ++A L+ ++EE M+ +LQE++ +E+ V + PY+ + + R
Sbjct: 819 KLSSLREEIKRKVEQVAQSLSLKLEEEMKAELQESIQSIESSVLQFTAPYRSLVEKESTR 878
Query: 894 LSEIQDELSNVQEKIQTLQVEIQNL 918
++ +Q++L + +++Q L+ IQNL
Sbjct: 879 IAAVQEKLVVIDKELQMLRKNIQNL 903
>gi|307104954|gb|EFN53205.1| hypothetical protein CHLNCDRAFT_137054 [Chlorella variabilis]
Length = 997
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 296/946 (31%), Positives = 462/946 (48%), Gaps = 160/946 (16%)
Query: 71 LYPGGYKRPEIKVPNVVLQLEPHQVL---AGGDALDLIDEAVAKFVGIVVLNGGEASGKS 127
L+P G ++ +++P ++L + VL G AL+ + AVA VVL G G S
Sbjct: 74 LFPAGKRQARVQLPALMLAVTAADVLDPAQAGGALEALSAAVAGGATAVVLAQGADGGGS 133
Query: 128 ----VYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMS 183
+YEAA LK +++ RA+ LIA+R DI A A G LL+ GLP +VA+ ++D ++
Sbjct: 134 GGAELYEAAVRLKELLRGRAVLLIADRTDIVDAAGADGALLTGAGLPTMVAKRMLQDGLA 193
Query: 184 ESVVLPLVGRNVQTLDAAFNASSSEGADFLVC-CFGEG------QKADVIENSLFTNVKI 236
LVGR V + A ++++GA+F++ G G +A + ++ I
Sbjct: 194 ------LVGRVVSSA-EAAAEAAADGANFVILEPSGPGLAAPNSAEAVASQQQQRSSASI 246
Query: 237 PIF--IMNASPLVDVSKFLKSGASGFVISLEDLSLFNDG---------------VLSQMF 279
P+ + + +++ L +G G V+ L DL V+ Q+
Sbjct: 247 PVVAAVSGEAGRDQLAQLLAAGVDGLVVQLGDLQPVAAALARRQPAGAGEAAAAVMQQL- 305
Query: 280 CANGTTNEKTDRG---------------EDVSNVKLLDTSNSFFGKERVAGFVKFEDREK 324
A G + V +LL TS + D E+
Sbjct: 306 -AGGVAPPAASLPADAAAAAAGPPQAVQQAVQLSQLLSTSRE-----------ELVDAER 353
Query: 325 QLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINAL 384
QL TE S + +++ P M E LL DAV Q+DE FLLV++GE+NSGKS+V+NAL
Sbjct: 354 QLF-TEASPAAAVLAFLERWCPQMGEAQLLRDAVKQLDELFLLVVLGEFNSGKSAVVNAL 412
Query: 385 LGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPG 444
LG+RYL +G++PTTNEI L+ +D E Q + DG + YLP+ +L+E+ +VDTPG
Sbjct: 413 LGQRYLAEGILPTTNEINVLKHAD--PEHVQTAAQDGDGVFTRYLPAELLREVNVVDTPG 470
Query: 445 TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
TNVIL RQQRLTEE+VPRADLVLFV+SADRPLTESEV FL+Y +QW KKVVFV+NK+D+
Sbjct: 471 TNVILGRQQRLTEEYVPRADLVLFVLSADRPLTESEVRFLQYVRQWGKKVVFVVNKTDIL 530
Query: 505 QNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSV----SSAVGK---DHSE 557
+A E+ E +SFV+ N ++L ++ + VSAR+ ++AKL V S+ GK + +
Sbjct: 531 SSAAEVAEVVSFVRSNAARVLGVDEPQVLAVSARAAMQAKLEVLGDGSNGNGKLSGEQAA 590
Query: 558 LSVNDSHWRINTFDKLEKLLYSFLDGSS----------------------STGKERMRLK 595
W+ + F+ LE+ ++ FL G + G E +RLK
Sbjct: 591 ALAAHPAWQRSGFEPLERFIFEFLTGGNPAAAAAATAGSNGTARGGGEGRQAGAESVRLK 650
Query: 596 LETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLS 655
LE+P+ +A+ LL + + ++ A+QD + + L + +ME E R +
Sbjct: 651 LESPLFVADALLGAAAQQLEQELAVAQQDAASVSIVRSQLAAFRREMEKEGQLQRDEVQR 710
Query: 656 LIDSTKSRVVKLIESTLQ----------ISNLDIVASYVF-RGEKSAAMPSTSRIQHDII 704
+ T + +++S LQ +SN++++ SY+F R + A+P ++ ++
Sbjct: 711 QVAGTAKKAAAIVDSMLQARCHAVLCHDLSNMEVITSYLFGRADDKRALPVAAKFDEEMA 770
Query: 705 GPALLDTQKLLGEYTMWLQSKNAREGRRYKES------FENRWPSLVYLQPQVYPDMYE- 757
A L+ E++ WL S R+ Y+ + + S + L +V+ E
Sbjct: 771 AEATAGLTGLVKEHSAWLASNCQRQLANYRHAPTPCAVLDVPPISRLALARRVHLTFAEQ 830
Query: 758 ----LVRKVDGYSSRVIEDFSASSTSK-------------------------------MF 782
L +DG S +E + + ++ M
Sbjct: 831 RAAALDETLDGLLSTELEGLDSDAGARRRWREMRQLTTEAEVAAADGGPPPDAEAALVML 890
Query: 783 EQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRV 842
E+E+RE + T G A LLT++LPTT+EDLLAL L + GY+++ N P RR
Sbjct: 891 EEEVREAVISTAGTAAGAAGFGVLLTAILPTTVEDLLALCLAAMVGYVSILNLPMRRAEA 950
Query: 843 IEKVNKIADGLA-------REIE--EAMQKDLQETVGHLENFVTKV 879
K+ A R +E EA + L +T+ L+ V V
Sbjct: 951 KRKLEHTTTAFAQLTAAEVRRVEQAEAARGQLVDTLDRLKQRVANV 996
>gi|412989949|emb|CCO20591.1| predicted protein [Bathycoccus prasinos]
Length = 919
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 265/896 (29%), Positives = 466/896 (52%), Gaps = 86/896 (9%)
Query: 75 GYKRPEIKVPNVVLQLEPHQVLA---GGDAL-DLIDEAVAKFVGIVVLNG--GEASGKSV 128
G KR + K+P + P + G + L + I+ V K +VVL+ S +
Sbjct: 58 GKKRSKAKLPGYAFYVSPEDFSSTKEGDERLPEHIEAVVKKGATMVVLHDPTSSLSTREF 117
Query: 129 YEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVL 188
Y A +K+ +++R L+ +R DI ++ GV+LS G+P +VAR +M + S+V+
Sbjct: 118 YNLAVNIKTNLRERCALLVVDRTDIVSSAEIDGVVLSTDGVPTVVARKSMPEG---SLVV 174
Query: 189 PLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIF--IMNASPL 246
G N + + A + EG D L + + NV +PIF NA+ L
Sbjct: 175 VSAGENAKNAEIA----AKEGCDVLFVSDAS------VAKKIRDNVSVPIFSSFRNAADL 224
Query: 247 V-DVSKFLKSGASGFVI----SLEDLSLFND-GVLSQMFCANGTTNEKTDRGEDVSNVKL 300
++ + +G G + + +D ++ + G +G ++ E+ + K
Sbjct: 225 TSNIDTIVAAGCDGVTLYENANKKDAAIADTIGAALSALGGDGEEDKNFLNKEETTERKS 284
Query: 301 LDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQ 360
F V G ++ ++L+ ER +L + ++ ++ ++P +EE+ LL+DA
Sbjct: 285 AIPPTQFTS---VIG-----EQGERLLNKEREILDDIVNFLETSAPELEEIKLLLDARKG 336
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
+DE FL+VIVGE+N+GKSSVINA+LG ++L +G++PTTNEIT LR+ E +QR +
Sbjct: 337 LDELFLIVIVGEFNAGKSSVINAVLGDKFLAEGILPTTNEITVLRYG----ESKQRVQSE 392
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
DG Y +P +LK++ IVDTPGTNVIL+RQQRLTEEFVPRADLVLFV+SADRP+TESE
Sbjct: 393 -DGFYNQDIPVDLLKQVSIVDTPGTNVILKRQQRLTEEFVPRADLVLFVLSADRPMTESE 451
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
V FL Y ++W KKVVFVLNK DL + + E FV++N +LL ++N + PV+AR+
Sbjct: 452 VKFLSYIKKWGKKVVFVLNKCDLLETDEDRNEVTKFVRDNAKRLLGVDNAPVIPVAARNA 511
Query: 541 LEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPI 600
L +L ++A K+++E +N++ L + G + +G E +RLKL TP+
Sbjct: 512 L--RLKKANASMKEYAETGFPAFEEYVNSY--LGGGSGNNKSGENRSG-EALRLKLATPL 566
Query: 601 RIAERLLSSCETLVMKDCQDAKQDLTLA---NEMIDSLKEYVMKMESESISWRRKTLSLI 657
++E LLS+ + ++ + A+ ++ A +E +++ KE ++K SE +++ R +
Sbjct: 567 NVSELLLSASKQILDAEMSVAETEVAAASGVDEQMNAYKETMVKDASEQVNFVRAN---V 623
Query: 658 DSTKSRVVKLIESTLQISN-LDIVASYVF---------------------------RGEK 689
+ R L++ TL++ N LD++ +Y+ G +
Sbjct: 624 NGAVKRANALVDETLRLENALDLITTYIVGADYSELDDLDVASNSSGDSADAASGGEGNR 683
Query: 690 SAAMPSTSRI----QHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLV 745
S+ Q ++G A + +K + E++ WL+ N Y ++ +R
Sbjct: 684 KKRKKKYSKFVKAYQSTVLGSADQELKKTVKEFSKWLKRNNDARLSSYLKAVSSRGFDTT 743
Query: 746 YLQPQVYPDMYELVR---KVDGYSSRVIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGL 802
+ + + K++ + V ++F + + ++E+R G+ G A +
Sbjct: 744 VTASGIKEFLESSEKGAPKINSAAIAVADNFDNEAAAYKLDEEMRSAVYGSLGSSAGALV 803
Query: 803 SASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQ 862
SA +L+ L + ED+LA L +A GY+ + + P +RQ K+ + A+ L ++E +
Sbjct: 804 SAFVLSGFLSSMSEDILAYLLAAAVGYVGILSLPLKRQECKAKIQRAAEALVEDVERELL 863
Query: 863 KDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNL 918
K+L E + + V ++ P++ AA+++ R+ + + +++ L +E++NL
Sbjct: 864 KELAEEIDATSDRVDQLVAPWEAAARVERARVQKCLEVQEKYATEVENLAIEVENL 919
>gi|308808993|ref|XP_003081806.1| Mitofusin 1 GTPase, involved in mitochondrila biogenesis (ISS)
[Ostreococcus tauri]
gi|116060273|emb|CAL55609.1| Mitofusin 1 GTPase, involved in mitochondrila biogenesis (ISS)
[Ostreococcus tauri]
Length = 849
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 269/865 (31%), Positives = 452/865 (52%), Gaps = 94/865 (10%)
Query: 69 RTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVL-----NGG-- 121
R+L+ G KR EI++P V ++ + + ID A+ ++VL NGG
Sbjct: 64 RSLFASGSKRSEIRIPGFVAYVDVREA-STERGTRAIDNALHAGATMIVLQERGMNGGVG 122
Query: 122 -EASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKD 180
ASG+++YE+A LK +V+ RA LI +R DIA GV+L+D G+P +VAR T
Sbjct: 123 ESASGRALYESATALKDLVRGRAKVLIQDRTDIAVQAELDGVVLTDDGVPTVVARKT--- 179
Query: 181 SMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFI 240
+S V+ V + + A S EGAD L+ + + L V +PIF+
Sbjct: 180 -LSPKAVVAHVSDDAVEAEKA----SKEGADVLLV------SSLRTLSELREKVSVPIFV 228
Query: 241 MNASPLVDVSKFLKSGASGFVISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSNVKL 300
+ + S +G I+ + D ++S CA D + VKL
Sbjct: 229 DVQGGVSTLLGEDSSTLNGLTINGANGVTICD-IVSDEMCA------------DEARVKL 275
Query: 301 LDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQ 360
V+ V + ++ R+ L IK LL++A
Sbjct: 276 A-----------VSAVVDALTQNAVNVDRARARALGGDFDIK----------LLVEARKS 314
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
I++ FLLVIVGE+N+GKSSVINA LG +++ +G++PTTNEIT LR+ + + EQ
Sbjct: 315 IEDLFLLVIVGEFNAGKSSVINAFLGDKFVAEGILPTTNEITVLRYGERKAREQ-----S 369
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
DG + +P+ IL+++ IVDTPGTNVILQRQQ+LTEEFVPRADL+LFV+SADRP+TESE
Sbjct: 370 EDGFFTYKIPAEILRQVRIVDTPGTNVILQRQQKLTEEFVPRADLILFVLSADRPMTESE 429
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
V FL Y ++W KKVVFV+NK+DL + A ++ + FVK+N +LL + + + PVSAR
Sbjct: 430 VKFLTYIRKWGKKVVFVVNKTDLLEEANDVRDVSQFVKDNAERLLGVNDPAVLPVSARKA 489
Query: 541 LEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPI 600
L+AK + ++ VG + + F + E + S+L GS E +RLKL TP+
Sbjct: 490 LKAKKANANYVGT---------REFVDSGFGQFEDYVMSYLGGSGERAGEALRLKLLTPL 540
Query: 601 RIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDST 660
+ LL + E ++ + +AK ++ +A + + +Y +M ++S + + T S++ +
Sbjct: 541 NVCTLLLDAAEQILETEDDEAKSEVAIAIGVKTQMDDYTKEMVADSKAQQEATRSIVQAA 600
Query: 661 KSRVVKLIESTLQISN-LDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLG--- 716
R ++++ TL++SN L + +Y+ G S+ + S Q++ + L D+++ LG
Sbjct: 601 IKRAERIVDDTLRLSNALSLFNTYIL-GTGSSGVAS----QYEKL--VLGDSEERLGAAC 653
Query: 717 -EYTMWLQSKNAREGRRYKESFENRW--PSLVYLQPQVYPDMYELVRKVDGYSSRVIEDF 773
E++ WL N + + Y ++ + R SL + + ++ S V+ +F
Sbjct: 654 EEFSAWLDRNNEAQLQAYIDAVKGRGFDASLSSVDNE---------KEERAKSLSVVSNF 704
Query: 774 SASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVA 833
++ +++ ++ I + T G G A +++ L+ + ED+L L AG YIAV
Sbjct: 705 DHTAAAQLLDKSIGKAVETTIGSAGGAFVASFFLSGFFNSFSEDVLVYALGLAGAYIAVL 764
Query: 834 NFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDR 893
+ P +R + K+ + A E+EE M+ + VG ++ + P+ AA+ + R
Sbjct: 765 SLPLKRSEIKSKIRRSAAAFLTELEETMENECTTQVGSTTQKISTICAPWAAAARAEAAR 824
Query: 894 LSEIQDELSNVQEKIQTLQVEIQNL 918
++E + +++ ++ + +++ NL
Sbjct: 825 VAECLEARRELKKSLEKMMIDVANL 849
>gi|255086301|ref|XP_002509117.1| hypothetical protein MICPUN_62927 [Micromonas sp. RCC299]
gi|226524395|gb|ACO70375.1| hypothetical protein MICPUN_62927 [Micromonas sp. RCC299]
Length = 1014
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 227/680 (33%), Positives = 370/680 (54%), Gaps = 55/680 (8%)
Query: 78 RPEIKVPNVVLQLEPHQVLAGGDALDLIDEA-VAKFVGIVVL--NGGEASGKSVYEAACL 134
R ++++P V + P V EA VA V+L + G+A+ + ++ AA
Sbjct: 103 RRQVRIPGFVFAVSPAVVNGEDADALAALEAAVASGATAVILADDTGDATTRELFNAALA 162
Query: 135 LKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRN 194
LK ++ RA L+A+R DIAA+ GV+LSD G+P +VAR ++ + +V
Sbjct: 163 LKESLRGRASLLVADRTDIAASAECDGVVLSDDGVPVVVARKSLSSASG------VVACG 216
Query: 195 VQTLDAAFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIMNASPLVDVSK--- 251
V+ AA A+ EGAD ++ G+ AD + + +P+F + VS
Sbjct: 217 VKDEQAALIAAK-EGADLILAP--NGRVADAVRG----KISVPVFASPRNGWAGVSAPDA 269
Query: 252 ---FLKSGASGFVISLEDLSL-FNDGVLSQMFCANGTTNEKTDRGEDVSNVKLLDTS--- 304
+ +GA G V+ S+ G+ + + + +D E + T
Sbjct: 270 IQALVDAGAKGAVLPTPPPSVDVARGITAALAPIAAAVKKDSDDSEPGAAPSASTTPTPV 329
Query: 305 NSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEP 364
+ G +AG + + + L+E ER +L +A+ + +++P +EE+ LL++A ++E
Sbjct: 330 GTSVGTTTMAGKI-IDPTTQALLERERVLLDDAVAFLVESTPSLEEIGLLVEARKGLEEL 388
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
FLLVIVGE+N+GKSSVINA+LG++ LK+G++PTTNEIT L+F + + R E+ DG
Sbjct: 389 FLLVIVGEFNAGKSSVINAMLGQKALKEGILPTTNEITVLKFGN-----EPRTEQSKDGF 443
Query: 425 YICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
Y +P+ +L+E+ IVDTPGTNVIL+RQQRLTEEFVPRADLVLFV+SADRP+TESEV FL
Sbjct: 444 YTQLIPADLLREVNIVDTPGTNVILERQQRLTEEFVPRADLVLFVLSADRPMTESEVKFL 503
Query: 485 RYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
Y ++W KKV FV+NK D +N E++E FV +N +LL + + + PVSA++ L AK
Sbjct: 504 SYIRKWGKKVAFVVNKCDRLENQGEVDEVKGFVADNAERLLGVTDPAVLPVSAKAALAAK 563
Query: 545 LSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGK---ERMRLKLETPIR 601
+ SE F +LE + SFL GK E +RLKL TP++
Sbjct: 564 E-------RGGSE----------TDFAQLEDYILSFLGAGDKKGKNSGEGLRLKLGTPLQ 606
Query: 602 IAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTK 661
+ L + E ++ ++ +A ++L+ A + ++ +Y ME++ + + + +
Sbjct: 607 VGTMLFGAAEEILAQERAEAVEELSQAEGVDAAMDKYREAMEADFGAQVQAVRTAVMGAV 666
Query: 662 SRVVKLIESTLQISN-LDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTM 720
R L+++TL+++N D+ +YV + A+ R + +++G + + + E+T
Sbjct: 667 GRCDDLLDATLRLTNGADLFTTYVLGNGANGAI--RERYKKEVLGDSEAKLRAAIKEHTG 724
Query: 721 WLQSKNAREGRRYKESFENR 740
WL N + R Y ++ R
Sbjct: 725 WLARNNDNQLRAYADAVRAR 744
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%)
Query: 769 VIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGG 828
V F + +++ E+E+++ T G GA+ A L+ L ED+LA L +A G
Sbjct: 865 VAAGFDQAGAARLLEEEVKDAVYSTVGAAGASFFFAVFLSGFLDNFAEDVLAFSLTAAVG 924
Query: 829 YIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQ 888
Y++V + P +R K +A+ E+E AM+ + + VG V P+ +A+
Sbjct: 925 YVSVLSLPLKRAETKAKARAVAESFLDEVEGAMRAEFERKVGATTAQVRATTAPWVASAR 984
Query: 889 LKLDRLSEIQDELSNVQEKIQTLQVEIQNL 918
++ Q + E + LQ ++Q++
Sbjct: 985 EAEAAVAASQSRRDRIAEDMDQLQRDVQSI 1014
>gi|384248113|gb|EIE21598.1| hypothetical protein COCSUDRAFT_30102 [Coccomyxa subellipsoidea
C-169]
Length = 832
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 328/614 (53%), Gaps = 85/614 (13%)
Query: 333 VLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKD 392
++ + I ++++ P MEEV LL DA+ Q+D+PFL+V+VGE+NSGKS+VINALLG+R+L +
Sbjct: 270 LMTDIISLVQEVVPSMEEVGLLRDALKQLDQPFLMVVVGEFNSGKSTVINALLGRRFLAE 329
Query: 393 GVVPTTNEITFLRFSDLASEEQQRCE-----------RHPDGQYICYLPSPILKEMIIVD 441
G++PTTNEI+ L+F C R + YLP+ +L+++ IVD
Sbjct: 330 GILPTTNEISVLKF------RSSHCHTPLCAASFGFLRMLACSQVRYLPAALLRDLNIVD 383
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKS 501
TPGTNVIL+RQQRLTEE+VPRAD+VLF +SADRP T+SEV FL+Y +QW KKVVF++NK
Sbjct: 384 TPGTNVILERQQRLTEEYVPRADMVLFTMSADRPFTDSEVRFLKYIRQWGKKVVFLVNKV 443
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS-- 559
D+ E+EE FV +N ++L ++ + PVSAR+ L+AKL +S+ E S
Sbjct: 444 DILSGGDEVEEVAQFVSDNARRVLGVDAAKVLPVSARAALQAKLDATSSRNGFFGEASAL 503
Query: 560 --------------VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAER 605
W + F +LE+ + FL G + G E +RLKL+TP+ +A+
Sbjct: 504 HRSSPLETLDEEALARSGQWGESRFGELERFMVDFLVGGGAAG-ESLRLKLQTPLFVADA 562
Query: 606 LLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVV 665
LL + + + A+Q+ + L+ + +ME++ + R + L+ + R
Sbjct: 563 LLEAARQQLSSELSTAEQEAEAVASVQGQLRAFRREMEADGTAQRAECRRLVATAVRRAR 622
Query: 666 KLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSK 725
+L++ LQ+SN + +++Y R + R Q + + D
Sbjct: 623 ELVDDVLQLSNREALSAYAARRQW--------REQREAVAAQAKDANA----------DG 664
Query: 726 NAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQE 785
A EG + + +L+ +P+ + + + E+E
Sbjct: 665 EAGEGDAEESGSDTAVAALMRFEPK--------------------------AAALVLEEE 698
Query: 786 IREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEK 845
IRE L + AGL +LT +LPTTLED+LA+ L GY+A+ N P RR K
Sbjct: 699 IREAVLSSVSSAVGAGLVGVVLTWILPTTLEDVLAIVLTGLAGYVALLNLPLRRAEAKAK 758
Query: 846 VNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRL--SEIQ----- 898
+ ++A+ +E+E+ ++ +L+ ++ V KP ++A ++R+ SEI+
Sbjct: 759 LERVANNFIQEVEDRLKAELESSLDACTAEVNAFIKPLEEATLAVVERVRDSEIRRAVLA 818
Query: 899 DELSNVQEKIQTLQ 912
DEL ++++ +++
Sbjct: 819 DELEQLKQRAASVE 832
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 70 TLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDAL--DLIDEAVAKFVGIVVLNGGEASGKS 127
T++P G K+ ++ +P +L L V+ L + D A G+++ + G
Sbjct: 70 TVFPAGKKQAKVALPACILVLTAADVVERRQELTQSIGDAIAAGATGVLLEDDDGTGGAQ 129
Query: 128 VYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVV 187
+YEAA +LK V++ RA+ LI +R DI AA A GV+LS +G+P +VAR ++ D+ +
Sbjct: 130 LYEAAIVLKDVLRGRAVLLIQDRTDIVAAAEADGVVLSSRGVPTVVARRSLPDNAN---- 185
Query: 188 LPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQ 221
LVGR V T A A +++GA ++ G G+
Sbjct: 186 --LVGRKVATGHEAVRA-AADGASLVILESGSGR 216
>gi|145352091|ref|XP_001420392.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580626|gb|ABO98685.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 632
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 223/632 (35%), Positives = 351/632 (55%), Gaps = 60/632 (9%)
Query: 34 PHRTHF-----PIKSISNDNSFRSEDSAAAPVISEKQQRPRTLYPGGYKRPEIKVPNVVL 88
P R H +S + +F S A +KQQR L+ KR E+++P +
Sbjct: 23 PRRAHLYHPSTRARSSTAPRAFLDRLSGNATATGDKQQRD--LF-AQTKRAEVRIPGFLA 79
Query: 89 QLEPHQVLA--GGDALDLIDEAVAKFVGI----VVLNGGEASGKSVYEAACLLKSVVKDR 142
++ + + G + +D + A A V + V GG SGK +YEAA LK++V+ R
Sbjct: 80 YVDVDEATSTRGAEVVDAVLHAGATCVALREYGVDGTGGGNSGKKLYEAATTLKTLVRGR 139
Query: 143 ALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAF 202
A LI +R DIAA+ GV+L+D G+P +VAR ++ E+ V+ +
Sbjct: 140 ACVLIVDRTDIAASAELDGVVLTDDGVPTVVARK----ALPETAVVA----HESESAEEA 191
Query: 203 NASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
+S EGAD L+ + ++E ++ +V +PIF VD + L + AS
Sbjct: 192 EKASKEGADLLLV-----RDVAMLE-AIRQSVSVPIF-------VDAADGLGALASENSS 238
Query: 263 SLEDLSLFN-DGVLSQMFCANGTTNEKTDRGEDVSNV-KLLDTSNSFFGKERVAG----- 315
+L+DL+ +GV + + + ++ V V L+ S G + A
Sbjct: 239 TLQDLAAKGANGVTIRNLTKDPASGDEALLQSAVRAVANALEQSYEALGDSKGANGSAPQ 298
Query: 316 -----FVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIV 370
F +++IE ER ++ E + +++ ++E+ LL +A +++ FL+VI
Sbjct: 299 VTPKKFSLVSADGEEMIERERQLVEEILKFLRENCTDLDEIKLLAEARKGLEDLFLVVIC 358
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
GE+N+GKSSVINA+LG +++ +G++PTTNEI LR+S S EQ DG + +P
Sbjct: 359 GEFNAGKSSVINAMLGDKFVAEGILPTTNEIAVLRYSSKKSREQTE-----DGFFNVGIP 413
Query: 431 SPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQW 490
+ +L++M IVDTPGTNVILQRQQRLTEEFVPRADLVLFV+SADRP+TESEV FL Y ++W
Sbjct: 414 AELLQQMRIVDTPGTNVILQRQQRLTEEFVPRADLVLFVLSADRPMTESEVKFLTYIRKW 473
Query: 491 KKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSA 550
KKVVFV+NK+DL + +++E ++FVKEN +LL++ + + PVS+R+ L+AK
Sbjct: 474 GKKVVFVVNKTDLLSDLGDVDEVVAFVKENATRLLSVSDPAVLPVSSRNALKAK------ 527
Query: 551 VGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSC 610
K S N + + F K E + SFL GS E +RLKL TP+ ++E LL++
Sbjct: 528 --KADSSNYANSRAFVESGFGKFEDYVMSFLGGSGERAGEALRLKLSTPLNVSELLLNAA 585
Query: 611 ETLVMKDCQDAKQDLTLANEMIDSLKEYVMKM 642
E ++ + ++AK ++ +A + ++ Y +M
Sbjct: 586 EQILEGEDEEAKSEVAMATGVTSQMESYRQEM 617
>gi|159463162|ref|XP_001689811.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283799|gb|EDP09549.1| predicted protein [Chlamydomonas reinhardtii]
Length = 759
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 229/640 (35%), Positives = 352/640 (55%), Gaps = 102/640 (15%)
Query: 81 IKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVK 140
+++P VVLQLE +VLA G ALD + +A+ +VVL A+ ++Y+AA ++ ++
Sbjct: 6 VQLPAVVLQLEASKVLADGAALDTLSQALQGGCNMVVLWDSNANAAAMYDAALRVQEALR 65
Query: 141 DRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDA 200
RA L+ +R DIA A+ A GVLL+DQG+P +VA+ M + LVGR V A
Sbjct: 66 ARAPLLLVDRTDIALAIGAQGVLLTDQGVPTVVAKRMMPQA--------LVGRVVGDEGA 117
Query: 201 AFNASSSEGADFLVCCFGEGQKADVIENSLFTNVKIPIFIMNASPLVDVSKFLKSGASGF 260
A A++ + LV EG V S+ T K NA P+ L S A+
Sbjct: 118 AAAAAADGASLVLV----EGAGGAVPAASMLTGAKTGQRSGNAIPV------LMSNATA- 166
Query: 261 VISLEDLSLFNDGVLSQMFCANGTTNEKTDRGEDVSNVKLLDTSNSFFGKERVAGFVKFE 320
ED + +L+++
Sbjct: 167 ----ED---YAQAILTRL------------------------------------------ 177
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
+RE L+ E++ L E + +++ P + E+ LL DA+ +DEPFL+ +VGE+NSGKSSV
Sbjct: 178 NRES-LLSEEKAKLTEVLAFLEEVLPGVNELGLLRDALKALDEPFLVAVVGEFNSGKSSV 236
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLA----SEEQQRCERHPDGQYICYLPSPILKE 436
INALLG+RYL +G++PTTNEI+ L++SD A + Q + + DG Y+ YLP+ +L++
Sbjct: 237 INALLGRRYLAEGILPTTNEISILKYSDTAPATSNPSQVQLVQQSDGLYVRYLPAKLLQD 296
Query: 437 MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVF 496
+ IVDTPGTNVIL+RQQRLTEE+VPRADLVLFV+SADRP +ESEV FL Y +QW+KKVVF
Sbjct: 297 LNIVDTPGTNVILERQQRLTEEYVPRADLVLFVMSADRPFSESEVRFLEYIRQWQKKVVF 356
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVS-------- 548
V+NKSD+ +++ E++ FV N ++L ++ ++ VS+RS L AKL+ S
Sbjct: 357 VVNKSDILESSDEVDAVKEFVAANAQRILRLDRPSVIAVSSRSALRAKLTASNLPITASF 416
Query: 549 -------------SAVGKDHSELSVNDSH-WRINTFDKLEKLLYSFLDGSSSTGKERMRL 594
S V + E ++++S W ++ F +LE+ + +FL G + G E +RL
Sbjct: 417 DSDLPSASPTAPLSNVDPEAMEAALSNSRDWAVSNFSELERNVSNFLVGKGAGGGEGVRL 476
Query: 595 KLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTL 654
KL+TP+ +A+ LL + + D A+ +L + L + +ME ++ + R
Sbjct: 477 KLQTPLFVADALLGAAGRQLETDLAAARAELEGVQLVGRQLGRFRAEMEKDAAAQRAALQ 536
Query: 655 SLIDSTKSRVVKLIESTLQISNLDIVAS-------YVFRG 687
++ +R K ++ST+Q+SN ++ S Y FR
Sbjct: 537 PVLAEVLARAEKFVDSTVQLSNAPLLVSIAAGNKEYPFRA 576
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%)
Query: 768 RVIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAG 827
R + DF+ + S + + E+++ T G A + ++ TLEDLL L
Sbjct: 608 RAVGDFNLRAISTLLDTELQQAMATTAGTAVGAPVFGLFAMQIVGNTLEDLLLAALAGGV 667
Query: 828 GYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAA 887
Y+++ N P RR + K+ ++A +++ M++++ + V V ++ P +
Sbjct: 668 SYVSLLNLPLRRADLKGKIGRVAGNFVSDVQAKMEQEVADEVKATVAAVGELMAPLEQTY 727
Query: 888 QLKLDRLSEIQDELSNVQEKIQTLQVEIQNLH 919
++ RL + +L E +Q LQ NL
Sbjct: 728 GAEVARLEARKSDLVAFGEALQELQRRTANLE 759
>gi|303284705|ref|XP_003061643.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456973|gb|EEH54273.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1025
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 268/431 (62%), Gaps = 36/431 (8%)
Query: 322 REKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVI 381
+ + L+E ER +L +A+ + ++ +EE++LL++A ++E FLLVIVGE+N+GKSSVI
Sbjct: 418 KAQALLERERRLLDDAVVFLTESVSALEEINLLVEARRGLEELFLLVIVGEFNAGKSSVI 477
Query: 382 NALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVD 441
NA+LGK++L++G++PTTNEIT LR+ D A+ EQ + DG Y +P+ +LKE+ IVD
Sbjct: 478 NAVLGKKHLREGILPTTNEITVLRYGDKAATEQSK-----DGFYTQLVPAELLKEVNIVD 532
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKS 501
TPGTNVIL+RQQRLTEEFVPRADLVLFV+SADRP+TESEV FL+Y ++W KKVVFV+NK
Sbjct: 533 TPGTNVILERQQRLTEEFVPRADLVLFVLSADRPMTESEVTFLKYIRKWDKKVVFVVNKC 592
Query: 502 D-LYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSV 560
D + +N ++ E FV++N +LL + + T+ PVSAR L+AK ++ + L+
Sbjct: 593 DTISEN--DVTEVKGFVEDNAKRLLGVTDPTVLPVSARRALKAK--------QESASLTP 642
Query: 561 NDSHWRINTFDKLEKLLYSFL----------DGSSSTGKERMRLKLETPIRIAERLLSSC 610
+ FD LE+ + SFL +++ E +RLKL TPI++ L ++
Sbjct: 643 SG-------FDALEEYVLSFLGGGGGGGGGNGNAATASGEGLRLKLGTPIQVGTMLFTAA 695
Query: 611 ETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIES 670
E ++ ++ DA ++ A + D++ YV M S+ S ++ + +R +L++
Sbjct: 696 EDVLAEERADAAAEVAAATGVADAMAAYVEAMASDFSSQKQAVRDSVSKATARCDELLDQ 755
Query: 671 TLQISNL-DIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNARE 729
TL+++N D+ A+YV + R + ++ A D + L E+T WL+ N R+
Sbjct: 756 TLRLTNASDLFATYVLGDGGGGKI--RERYESQVLAGAEEDLRAALREHTGWLRRNNERQ 813
Query: 730 GRRYKESFENR 740
Y E+ R
Sbjct: 814 VSAYDEAVRAR 824
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 773 FSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAV 832
F + + E E+++ T G G A + A L+ L ED+LA L +A GY++V
Sbjct: 913 FDHDAAAAALENEVKDAVYSTVGAAGGAFVVAVFLSGFLDNLAEDVLAFALTAAVGYVSV 972
Query: 833 ANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGH 871
+ P +R KV AD L ++E AM+ + Q H
Sbjct: 973 LSLPLKRAEAKAKVRDAADALLADVEAAMEAEFQARSVH 1011
>gi|302828914|ref|XP_002946024.1| hypothetical protein VOLCADRAFT_120148 [Volvox carteri f.
nagariensis]
gi|300268839|gb|EFJ53019.1| hypothetical protein VOLCADRAFT_120148 [Volvox carteri f.
nagariensis]
Length = 963
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 269/441 (60%), Gaps = 29/441 (6%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
+RE L++ E++ L EA+ +++ P + E+SLL DA+ +DEPFL+ +VGE+NSGKSSV
Sbjct: 305 ERETLLLD-EKATLAEALSFLEETLPGVSELSLLRDALKALDEPFLVAVVGEFNSGKSSV 363
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFS--DLASEEQQRCERHPDGQYICYLPSPILKEMI 438
INALLG+RYL +G++PTTNEI+ L++S A+ + E+ DG Y+ YLP+ +L+++
Sbjct: 364 INALLGRRYLAEGILPTTNEISILKYSATAGATAATAQLEQQADGLYVRYLPAKLLQDLS 423
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
IVDTPGTNVIL+RQQRLTEE+VPRADLVLFV+SADRP +ESEV FL Y +QW+KKVVFV+
Sbjct: 424 IVDTPGTNVILERQQRLTEEYVPRADLVLFVMSADRPFSESEVRFLEYIRQWQKKVVFVV 483
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR---------------STLEA 543
NK+D+ + E+E FV N ++L ++ T+ VS+R S+L+A
Sbjct: 484 NKADILDSVDEVEAVKEFVARNAQRILRLDRPTVIAVSSRAALRAKLAAAGLSFTSSLDA 543
Query: 544 KLSVSSAVGKDHS-ELSVNDS------HWRINTFDKLEKLLYSFLDGSSSTGKERMRLKL 596
SSA G+ S E D+ WR + F +LE+ + +FL G + G E +RLKL
Sbjct: 544 DGPFSSAAGEAASLEAESLDAALPSSPDWRSSNFAELERQVSNFLVGRGAGGGEGVRLKL 603
Query: 597 ETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSL 656
+TP+ +A+ LL + + D A+ +L + L ++ +ME ++ + R +
Sbjct: 604 QTPLFVADALLGAAGRQLAVDLAAARAELEGLQLVSKQLTKFRSEMEKDATAQRAALQQV 663
Query: 657 IDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLG 716
+ SR + ++ T+Q+SN ++ S + G K P + + ++IG + +
Sbjct: 664 LSGVLSRAERFVDQTVQLSNAPLLVS-IAAGNKE--YPFRAAFEKEVIGNGFDSLRAAVS 720
Query: 717 EYTMWLQSKNAREGRRYKESF 737
E++ WL++ N R Y SF
Sbjct: 721 EHSSWLRA-NCDAQREYYASF 740
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 77/150 (51%)
Query: 770 IEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGY 829
+ +F+ + S + + E+++ T G A L ++P TLED+L GL A Y
Sbjct: 814 VSEFNVRAISTLLDTELQQAMATTVGTAAGAPLFGLFAMQLIPNTLEDILLAGLSGAVSY 873
Query: 830 IAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQL 889
+++ N P RR + K++++A +++ M+ ++ + V + V K+ +P + A
Sbjct: 874 VSLLNLPLRRADLKGKISRVASNFVSDVQSKMEVEVADEVAGVMRAVAKLMEPLEQAYGT 933
Query: 890 KLDRLSEIQDELSNVQEKIQTLQVEIQNLH 919
++ RL Q +L+ + + ++ LQ + NL
Sbjct: 934 EVARLEARQADLARLADGLKDLQRRVANLE 963
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 77 KRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLK 136
++ +++P V LQ+E +VL+ D + +A+ ++VL A+ S+Y+AA ++
Sbjct: 2 QQARVQLPAVALQVEASKVLSDAALPDAMSQALQGGCNMIVLWDSNANAASMYDAALRIQ 61
Query: 137 SVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARN----TMKDSMSESVVLPLVG 192
+++ RA L+ +R DIA AV A GVLL++Q L V + + ++VL VG
Sbjct: 62 DLLRGRAALLLVDRTDIALAVGAQGVLLTNQALVGRVVSDEGAAITAAADGANLVLVTVG 121
Query: 193 RNVQ 196
NV
Sbjct: 122 SNVH 125
>gi|148907581|gb|ABR16920.1| unknown [Picea sitchensis]
Length = 297
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 199/295 (67%), Gaps = 5/295 (1%)
Query: 630 EMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEK 689
E I+ LK+Y ME++SISWR++ LS+I+ K+I+S L+ISN+++ A Y+ +G++
Sbjct: 5 ENIEKLKQYQQMMENDSISWRKRILSVIEDANKCAEKIIDSILRISNVEVAADYILKGDR 64
Query: 690 SAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLV---Y 746
S +P S + +++G ALLD + LLG+Y WL+S NA++ R ++E F+ WPSL
Sbjct: 65 SGFIPVISSFESEVVGSALLDIRNLLGKYWTWLRSNNAQQERWFREIFDKEWPSLANPGK 124
Query: 747 LQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASL 806
L + E +++ +S +V+E+F+ + + +FEQEIREV + TFGGLG AG SAS+
Sbjct: 125 LNTGIEKKSEEQIQQ--AHSMKVLEEFNVKAAAILFEQEIREVVIETFGGLGVAGFSASI 182
Query: 807 LTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQ 866
LTS+LPTT+EDL+ALGLCSAGG+ V P RR V KV + A+ AR++EEAMQ+DL+
Sbjct: 183 LTSILPTTIEDLMALGLCSAGGFYGVWKLPQRRLEVKNKVQRTANSFARQLEEAMQEDLE 242
Query: 867 ETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
+ + E+ V + KPY+ AA+LK + L+ + E+ +V+ K+Q LQ ++QN S
Sbjct: 243 QAMRDAEHQVDLISKPYEHAAELKANHLNGLLVEIKHVERKLQLLQFKVQNFRAS 297
>gi|413945231|gb|AFW77880.1| hypothetical protein ZEAMMB73_997279 [Zea mays]
Length = 286
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 178/269 (66%), Gaps = 1/269 (0%)
Query: 522 MKLLNIENVTIYPVSARSTLEAKLSVS-SAVGKDHSELSVNDSHWRINTFDKLEKLLYSF 580
MKLL E+VT++PVS+RS LEAKLS S ++ GK +E ND WR + F +LE L SF
Sbjct: 1 MKLLTAEDVTLFPVSSRSALEAKLSYSKNSDGKHSTEAMYNDPRWRSSKFFELEDYLLSF 60
Query: 581 LDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVM 640
LD S+ GKER+RLKLETPI IA+RLL+SC+ LV + + A +DL +++ Y +
Sbjct: 61 LDSSTENGKERVRLKLETPIGIADRLLTSCQRLVKLEYEKAVEDLASIKDLVYGANNYAI 120
Query: 641 KMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQ 700
K++S+S SW+ + SLI+ K R V L+ESTLQ+SN+D++ +Y +G+ ++M +TS +Q
Sbjct: 121 KLKSDSSSWQNQISSLIERAKGRAVTLMESTLQLSNIDLIFAYTIKGKTGSSMRATSFVQ 180
Query: 701 HDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVR 760
+DI+ P L D LLG+Y+ WL S N RE Y E F RW +LV + + D LV
Sbjct: 181 NDILSPTLDDAVNLLGDYSTWLSSSNTREANVYLECFCERWDALVAPEERALLDPNGLVN 240
Query: 761 KVDGYSSRVIEDFSASSTSKMFEQEIREV 789
+ + + + +E F+AS+ +K FE+EIRE+
Sbjct: 241 EGEKLTIKALEGFNASAAAKDFEEEIREL 269
>gi|383763787|ref|YP_005442769.1| hypothetical protein CLDAP_28320 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384055|dbj|BAM00872.1| hypothetical protein CLDAP_28320 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 589
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 179/608 (29%), Positives = 307/608 (50%), Gaps = 56/608 (9%)
Query: 323 EKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVIN 382
+ Q++ ERSVL + ++ + ++V LL A Q+DE FLLVIVGE+N+GK++ +N
Sbjct: 9 QDQILRRERSVLEDLRVLLVRLGATDDDVLLLKRAREQLDELFLLVIVGEFNAGKTAFLN 68
Query: 383 ALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDT 442
ALLG+R L +GV+PTT++I LR+ + SEE D + +LP L+E+ +VDT
Sbjct: 69 ALLGERLLPEGVLPTTSQIQVLRYGEHKSEEVP-----GDDTVVIHLPVDWLQEINLVDT 123
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
PGTN ++QR Q +TE F+PR+DLVLFV SA+RP +ESE + L+ ++W KK+V V+NK D
Sbjct: 124 PGTNAVIQRHQEITEHFIPRSDLVLFVTSAERPFSESERLLLQRIREWGKKIVLVINKID 183
Query: 503 LYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVND 562
L + EL++ + FV N+ +LL I+P+SAR L AK + +L ND
Sbjct: 184 LIEQEEELKQIVDFVARNSAELLGAAP-RIFPISARLALNAK----EQARQTQQKLEEND 238
Query: 563 SHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAK 622
W+ + F LE+ + S LD ER+RLKLE P+ IAERL S + ++ K
Sbjct: 239 L-WKRSRFAALEQYIRSALDAG-----ERLRLKLENPLGIAERLCSQYQKVIANRRAVLK 292
Query: 623 QDLTLANEMIDSLKEYVMKMESESISWRRKTLSLID----STKSRVVKLIESTLQISNL- 677
D +D ++ + E++ + LS +D + R + + TL+I +
Sbjct: 293 DDFA----ALDRIEAQLAAHEADMRRDFKYHLSHVDNVLYAMAERGDRFFDETLRIGRVF 348
Query: 678 DIVASYVFRGE-KSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKES 736
D++ R E + + TSR ++ + + W+ ++ R+ R E
Sbjct: 349 DLINGEKVRAEFERVVVADTSRA-----------VEQQVSDLIDWMVDRDYRQWRDVMEY 397
Query: 737 FENRWPSLVYLQPQVYPDM---YELVRK-----VDGYSSRVIEDFSASSTSKMFEQEIRE 788
+ R + Q+ + +E+ R+ V + R+++ + + S Q+++
Sbjct: 398 LQER---ATHHADQIVGRVGSSFEMNRQNLLASVGREAQRIVDSYDPQTESLKLAQQVQS 454
Query: 789 VFLGT----FGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIE 844
+ T G LG + +LL + L L A L + G Y+ P RR R+ +
Sbjct: 455 ALVQTAAVEAGALGLGAILVTLLHTTLLDVTGLLGAGALAALGFYV----LPYRRNRLKQ 510
Query: 845 KVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNV 904
++ + L + EA+ + + + + + PY +++ ++L DEL +
Sbjct: 511 ELRSAINDLRNRLNEALTRQFERELSDGLQRMREAIAPYTRFVRVEREKLERTNDELERL 570
Query: 905 QEKIQTLQ 912
+ ++ L+
Sbjct: 571 RRELADLR 578
>gi|440791530|gb|ELR12768.1| dynamin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 644
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 231/409 (56%), Gaps = 21/409 (5%)
Query: 326 LIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALL 385
L++ E +L + + ++K E+V LL Q++E FLLV+VGE+N+GKS+ +NA+L
Sbjct: 74 LLQQEICLLEDVLAFLQKIGADQEDVELLKQTREQLEELFLLVVVGEFNAGKSAFLNAML 133
Query: 386 GKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT 445
GK+YLK+GV+PTT++IT +R + AS E PD + I YLP LK++ +VDTPGT
Sbjct: 134 GKKYLKEGVIPTTSKITSIRHGETASSVLPTEE--PDREVI-YLPVDWLKDLNLVDTPGT 190
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
N IL+ Q++TE FVPR+D+VLFV S+DR L+ESE FL +QWKKKV+ VL K DL +
Sbjct: 191 NAILKYHQQITEHFVPRSDMVLFVTSSDRALSESEHQFLNRIRQWKKKVLVVLQKVDLLE 250
Query: 506 NAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK-LSVSSAVGKDHSELSVNDSH 564
+ +LEE SFV + +LL I+ I+PVSAR L+AK L + E + +
Sbjct: 251 DEAQLEELRSFVAKGMSQLLGIQP-KIFPVSARLALKAKQLMAKENASAEVREKAEAAAL 309
Query: 565 WRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQD 624
W + + +LE + LD ER +LKL+ P+ IA LL+ + + Q +D
Sbjct: 310 WEKSRWAELETYILKSLDAG-----ERSKLKLKNPLGIAHNLLNKYKDVTESRLQVLAKD 364
Query: 625 LTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVA-SY 683
+T + + L+EY +M+ + + + +++ +R + L +SN+ +A S
Sbjct: 365 ITSIEHIEEQLEEYRKEMKRDYEFQQNRIDNVLLELANRGDAFFDEHLSLSNIFALARSE 424
Query: 684 VFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRR 732
RGE + ++ + ++ + + W KN+++ RR
Sbjct: 425 KLRGE----------FERTVVAETAIQIERSVSDLIDWTVDKNSKQWRR 463
>gi|268315896|ref|YP_003289615.1| dynamin family protein [Rhodothermus marinus DSM 4252]
gi|262333430|gb|ACY47227.1| Dynamin family protein [Rhodothermus marinus DSM 4252]
Length = 585
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 183/622 (29%), Positives = 312/622 (50%), Gaps = 83/622 (13%)
Query: 326 LIETERSVLLEAIDVIKKASP---LMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVIN 382
L+E ER++L V+ + L E +S + + +D F++V+VGE+N+GKS+V+N
Sbjct: 12 LLEAERNLLARLHGVLARTGADESLRERLS---EVIETLDALFVVVVVGEFNAGKSTVLN 68
Query: 383 ALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYIC--YLPSPILKEMIIV 440
AL G++ L++G +PTT +IT LR+ + E P +Y+ Y PS L+ +++V
Sbjct: 69 ALFGEKLLEEGPIPTTAKITLLRYGETPME-------RPRSEYLVERYHPSERLRHLVLV 121
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ-WKKKVVFVLN 499
DTPGTN I++R Q LTE F+PRADLVLFV S DRPL ESE FL Y + W K++VFVLN
Sbjct: 122 DTPGTNSIIRRHQELTEHFIPRADLVLFVTSFDRPLAESERQFLSYIRDTWGKRLVFVLN 181
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS 559
K+DL ++ +LE+ ++ ++ +L+ E I+P+SA EA+ S D E
Sbjct: 182 KADLARSEADLEQVLAHIRTGCRELMGFEP-EIFPISAARAFEARTS-------DDPERR 233
Query: 560 VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQ 619
W + F+ E+LL L G ER+R+KL P+ +AE+L+ +T + + Q
Sbjct: 234 AR--LWESSGFEDFERLLLDRL-----AGPERLRIKLTAPLDVAEKLIERLQTHLAERRQ 286
Query: 620 DAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDS----TKSRVVKLIESTLQIS 675
QD AN ++ L+ + ++ +E I+ R LS ID+ + R ++ ++ T++I
Sbjct: 287 LLAQD--RAN--LERLEARLEEVRAELIATVRPYLSEIDNQLLQVERRGLQFLQDTIRIG 342
Query: 676 NLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGE-YTMWLQSKNAREGRRYK 734
L ++ R ++ A + H + +LL + +W Q+ +
Sbjct: 343 RLGLLRDRD-RFKEEFARQVVRDLDHRLETTLAEAVDRLLQQGLQLWNQTLS-------- 393
Query: 735 ESFENRWPSLVYLQ-PQVYPDMY----ELVRKVDGYSSRVIEDFSASSTSKMFEQEIRE- 788
F R +V + PQV D+ +L V ++R +E + ++ + R+
Sbjct: 394 -EFTERVEQVVRRRPPQVRADLLYDRRQLFDAVVRQATRQLETYDLREEARRILENTRDA 452
Query: 789 --VFLGT--FGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVAN--------FP 836
+FLGT GLGA L ++L T A GL GG++A P
Sbjct: 453 VALFLGTEALAGLGA-------LVTMLIT------AAGLDVTGGFVAAGALAVVGLVVLP 499
Query: 837 ARRQRVIEKVNKIADGLAREIEEAMQKDLQETV-GHLENFVTKVGKPYQDAAQLKLDRLS 895
+++R + + + L E+ A+ + L+ V G LE + PY++ + +
Sbjct: 500 IQKRRALREFRNRIEQLRTELLTALGQQLEREVDGLLERLAATLA-PYREFVHREQRLVD 558
Query: 896 EIQDELSNVQEKIQTLQVEIQN 917
E ++ L ++ + + L+ I+
Sbjct: 559 ETEEALRALERETRRLRAAIEK 580
>gi|345302187|ref|YP_004824089.1| Dynamin family protein [Rhodothermus marinus SG0.5JP17-172]
gi|345111420|gb|AEN72252.1| Dynamin family protein [Rhodothermus marinus SG0.5JP17-172]
Length = 585
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 183/622 (29%), Positives = 312/622 (50%), Gaps = 83/622 (13%)
Query: 326 LIETERSVLLEAIDVIKKASP---LMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVIN 382
L+E ER++L V+ + L E +S + + +D F++V+VGE+N+GKS+V+N
Sbjct: 12 LLEAERNLLARLHGVLARTGADESLRERLS---EVIETLDALFVVVVVGEFNAGKSTVLN 68
Query: 383 ALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYIC--YLPSPILKEMIIV 440
AL G++ L++G +PTT +IT LR+ + E P +Y+ Y PS L+ +++V
Sbjct: 69 ALFGEKLLEEGPIPTTAKITLLRYGETPME-------RPRSEYLVERYHPSERLRHLVLV 121
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ-WKKKVVFVLN 499
DTPGTN I++R Q LTE F+PRADLVLFV S DRPL ESE FL Y + W K++VFVLN
Sbjct: 122 DTPGTNSIIRRHQELTEHFIPRADLVLFVTSFDRPLAESERQFLSYIRDTWGKRLVFVLN 181
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS 559
K+DL ++ +LE+ ++ ++ +L+ E I+P+SA EA+ S D E
Sbjct: 182 KADLARSEADLEQVLAHIRTGCRELMGFEP-EIFPISAARAFEARTS-------DDPEQR 233
Query: 560 VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQ 619
W + F+ E+LL L G ER+R+KL P+ +AE+L+ +T + + Q
Sbjct: 234 AR--LWESSGFEDFERLLLDRL-----AGPERLRIKLTAPLDVAEKLIERLQTHLTERRQ 286
Query: 620 DAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDS----TKSRVVKLIESTLQIS 675
+QD AN ++ L+ + ++ E I+ R LS ID+ + R ++ ++ T++I
Sbjct: 287 LLEQD--RAN--LERLEARLEEVRIELIATVRPYLSEIDNQLLQVERRGLQFLQDTIRIG 342
Query: 676 NLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGE-YTMWLQSKNAREGRRYK 734
L ++ R ++ A + H + +LL + +W Q+ +
Sbjct: 343 RLGLLRDRD-RFKEEFARQVVRDLDHRLETTLAEAVDRLLQQGLQLWNQTLS-------- 393
Query: 735 ESFENRWPSLVYLQ-PQVYPDMY----ELVRKVDGYSSRVIEDFSASSTSKMFEQEIRE- 788
F R +V + PQV D+ +L V ++R +E + ++ + R+
Sbjct: 394 -EFTERVEQVVRRRPPQVRADLLYDRRQLFDAVVRQATRQLETYDLREEARRILENTRDA 452
Query: 789 --VFLGT--FGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVAN--------FP 836
+FLGT GLGA L ++L T A GL GG++A P
Sbjct: 453 VALFLGTEALAGLGA-------LVTMLIT------AAGLDVTGGFVAAGALAVVGLVVLP 499
Query: 837 ARRQRVIEKVNKIADGLAREIEEAMQKDLQETV-GHLENFVTKVGKPYQDAAQLKLDRLS 895
+++R + + + L E+ A+++ L+ V G LE + PY++ + +
Sbjct: 500 IQKRRALREFRNRIEQLRTELLTALEQQLEREVDGLLERLAATLA-PYREFVHREQHLVE 558
Query: 896 EIQDELSNVQEKIQTLQVEIQN 917
E + L ++ + + L+ I+
Sbjct: 559 ETGEALQALERETRRLRAAIEK 580
>gi|390556693|ref|ZP_10243112.1| conserved hypothetical protein, predicted GTPase (dynamin-related)
[Nitrolancetus hollandicus Lb]
gi|390174745|emb|CCF82397.1| conserved hypothetical protein, predicted GTPase (dynamin-related)
[Nitrolancetus hollandicus Lb]
Length = 587
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 289/602 (48%), Gaps = 43/602 (7%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
DR+++L E ++ E VI + ++ +LL DA ++ FLLVIVGE+NSGKS++
Sbjct: 14 DRQEELRERALGIIQELSQVISQFPAAEDDANLLRDAAERLRALFLLVIVGEFNSGKSAL 73
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIV 440
INALLG+ + +GV PTT+ I LR+ + +E D P+P L ++ +V
Sbjct: 74 INALLGETVMPEGVTPTTSAIHVLRYGESPNEMIG-----ADSIIEHTYPAPFLVDVNLV 128
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
DTPGTN I++ + L++EFVPRADLVLFV SADRP TESE F+ + W KK+V VLNK
Sbjct: 129 DTPGTNAIIREHEALSQEFVPRADLVLFVTSADRPFTESERQFMVEIRNWGKKIVVVLNK 188
Query: 501 SDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSV 560
DL Q+ ++ + + F++ N +LL +E I+PVSAR ++L+ +D E
Sbjct: 189 VDLLQSPEDVAKVMDFIRANAHRLLGLEP-EIFPVSARKARRSQLT------EDPVE--- 238
Query: 561 NDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQD 620
D W + F + + LD + R+RLKL +P+ IA+RL + +
Sbjct: 239 RDRLWEESQFAPFSRFVIESLDEET-----RVRLKLLSPLGIADRLTARYRGIAADRLGT 293
Query: 621 AKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISN-LDI 679
++D+ + + Y +ME++ + + S++ R + + T+++ LD+
Sbjct: 294 LERDIETIERIDQRIAAYRTEMETDFAGYLARIESIVHRFNDRADQFFDQTIRLGRVLDL 353
Query: 680 VASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLG-EYTMWLQSK---NAREGRRYKE 735
+ + E + S + Q D L+D ++G + MW + R+ R+ E
Sbjct: 354 LNRDRIQQEFKDQVVSDTERQIDDTVAELIDW--MVGRDLQMWQAVTDFIDRRQLDRHHE 411
Query: 736 SFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGT-F 794
P Q + D L+ V + +++ + ++ + T
Sbjct: 412 EVIGEGPG------QFHYDRQALLSSVSHRAGDIVDRYDPQHEGRLISDSVHSAVTQTAL 465
Query: 795 GGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLA 854
+GA L A+++ T++ L GG + + PAR++ + K + L
Sbjct: 466 TEVGAVSLGAAVIAMATTVTMDVTGILAAAFIGG-LGLLILPARKRHARNLLRKRSAELN 524
Query: 855 REIEEAMQ----KDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQT 910
+ + EA+Q +++ ++ + N V PY + D+L + D L + I
Sbjct: 525 QRLSEALQDQFHREIDRSIARVRNAVA----PYASFVNGERDKLRRVNDALEEIDRDIAE 580
Query: 911 LQ 912
L+
Sbjct: 581 LR 582
>gi|148657634|ref|YP_001277839.1| dynamin family protein [Roseiflexus sp. RS-1]
gi|148569744|gb|ABQ91889.1| Dynamin family protein [Roseiflexus sp. RS-1]
Length = 585
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 276/580 (47%), Gaps = 51/580 (8%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL 409
++ +L D ++ +DE FLLV+ GEYNSGKSS INALLG + +GV PTT+ IT LR+ D
Sbjct: 44 DMRILDDTITHLDELFLLVVAGEYNSGKSSFINALLGAPVVAEGVTPTTDRITILRYGDT 103
Query: 410 ASEEQQRCERHPDGQYIC--YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
E ++ P+ +L+ M IVDTPGTN I++R + LT F+PRADLVL
Sbjct: 104 PGETVSSA-------FLVEHRFPAEVLRRMAIVDTPGTNAIIRRHEELTHNFIPRADLVL 156
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNI 527
FV SA +P + SE FL + W KKVV ++NK+DL +A L E ++FV + L +
Sbjct: 157 FVTSAGQPFSASERAFLELIRDWGKKVVLIINKADLLDDA-GLAEVVAFVGRHAEDLFGM 215
Query: 528 ENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSST 587
I+PVSAR +A+ + A+ W + F +E+ + + LD
Sbjct: 216 RP-RIFPVSARLARQARDTDDQAL-------------WEASRFPAVEQYIVTTLD----- 256
Query: 588 GKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESI 647
+ER+RLKL +P+ +A RL V ++D+ + + L + + +
Sbjct: 257 EEERVRLKLLSPLGVARRLAERYLLAVEDRLSALREDVAAIDNIERQLDLFRRDLTEDFE 316
Query: 648 SWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPA 707
R + ++++ + R ++ + T+++SNL + + + E S A DI+
Sbjct: 317 RHRAEVANILNEFELRGIRFFDETIRVSNLFNLVRH--QQEISEAFA------RDIVADV 368
Query: 708 LLDTQKLLGEYTMWLQSKNAREGR------RYKESFENRWPSLVYLQPQVYPDMYELVRK 761
+ L W+ KN R + R + + + R + + + L+
Sbjct: 369 PQQIEARLQALIDWMVEKNLRMWQGVMDYLRRERAVQQRSGLIGEIGATFEYNRAALIES 428
Query: 762 VDGYSSRVIEDFSASSTSKMFEQEIREVFLG-TFGGLGAAGLSASLLTSVLPTTLED--- 817
V + +VI + + ++ E++ G T G GA G+ +LL +L + D
Sbjct: 429 VAREAEKVIATYDREAEAQALTAEVQAAIAGSTLVGAGAVGI-GTLLVLLLHGAMLDVTG 487
Query: 818 LLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVT 877
+L GL + GG + N RRQ + ++AD L + E M++ + +
Sbjct: 488 VLVAGLLAVGGLYLIPN--KRRQIKRQFHQRVAD-LHETLAETMERQFNTECDRMITRIR 544
Query: 878 KVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQN 917
+PY + + L Q +LS+ + +I LQ EI+
Sbjct: 545 DAIEPYTRFVYAQHELLLTTQRDLSDTEAEISRLQAEIER 584
>gi|159899487|ref|YP_001545734.1| dynamin family protein [Herpetosiphon aurantiacus DSM 785]
gi|159892526|gb|ABX05606.1| Dynamin family protein [Herpetosiphon aurantiacus DSM 785]
Length = 583
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 171/612 (27%), Positives = 299/612 (48%), Gaps = 54/612 (8%)
Query: 321 DREKQLIETERSVLLEAIDVIKK--ASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
+RE +L E+S+ +++ A + + L +A Q+ E FL+V+ GE+N+GKS
Sbjct: 12 EREAELRAAEQSLFDRLHHALEQFGADVTATDAARLREATEQLAELFLIVVAGEFNAGKS 71
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMI 438
S INALLG R L +GV PTT+ I LRF EQ + D + P+P+L ++
Sbjct: 72 SFINALLGDRVLPEGVTPTTDRINILRFG-----EQPDSQLLEDFLLLRTHPAPLLGDLN 126
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
IVDTPGTN I++R + LT+ FVPR+DLVLF+ SADRP TESE FL + ++W KK+V V+
Sbjct: 127 IVDTPGTNAIIRRHEELTKRFVPRSDLVLFITSADRPFTESERTFLEHIREWGKKIVLVI 186
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
NK D+ E I FV+ N LL I+ VSARS L A+ + D +L
Sbjct: 187 NKIDILDEKGR-GEVIEFVRSNATTLLG-STPMIFAVSARSALRAREN-------DDPKL 237
Query: 559 SVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDC 618
W + F+ +E+ L LD ER+RLKL P+ + ++L ++ T +
Sbjct: 238 ------WAESGFNAMEEYLLRTLDQG-----ERVRLKLLNPLGVGQKLATTYRTASDERL 286
Query: 619 QDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNL- 677
+D+ N + ++ Y M+ + + +LI + R + +++
Sbjct: 287 HTLSEDIKAINNIEGQIQVYKADMQRDFTPRIAQLENLIHEFEQRGHSFFDEQIRLGRAR 346
Query: 678 DIVASYV----FRGEKSAAMPS-TSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRR 732
D++ + FR + + + T RI II + KL + ++ + R+ R
Sbjct: 347 DLIKKDLLEQRFRDQVVGDLDAETDRITQQIIDWLIERNLKLWQDVNAYI---DRRQISR 403
Query: 733 YK-ESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFL 791
+K E N + Y + L+ V +S++++ ++ + +K +++
Sbjct: 404 HKDEMVGNVGQNFNY-------NRQSLIDSVGRSTSQIVQSYNRDAEAKQLAMDLQGTIA 456
Query: 792 GT-FGGLGAAGLSASLLTSVLPTTLEDLLALGL----CSAGGYIAVANFPARRQRVIEKV 846
T G+GA G A L + L D + L + G Y+ A ++ +KV
Sbjct: 457 TTALTGVGAVGFGA-LFVILAHGALLDFTGISLSVLAVAGGAYLIPAKRAQAKREFHKKV 515
Query: 847 NKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQE 906
+++ D + R + + + ++ +++ VT+ PY + + ++L ++EL++V++
Sbjct: 516 SELRDKIVRSLSKQVYAEIDQSIER----VTETVAPYTRFVKFQNEQLQHARNELASVEQ 571
Query: 907 KIQTLQVEIQNL 918
+ L+ EI+ L
Sbjct: 572 ALGRLRGEIEAL 583
>gi|309792748|ref|ZP_07687193.1| Dynamin family protein [Oscillochloris trichoides DG-6]
gi|308225200|gb|EFO78983.1| Dynamin family protein [Oscillochloris trichoides DG6]
Length = 587
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 280/571 (49%), Gaps = 36/571 (6%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL 409
+V L D + +DE FL+V+ GE+N+GKSS +NALLG + L +GV PTT+ IT L++
Sbjct: 47 DVRTLNDILEHLDELFLIVVAGEFNAGKSSFLNALLGTQVLPEGVTPTTDTITLLQYG-- 104
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
E+ E +G + P+ +L+++ IVDTPGTN ++++ ++LT EF+PRAD+VLF
Sbjct: 105 ---EEVASELRTNGLRVHTYPADVLRQLNIVDTPGTNAVIRQHEQLTREFIPRADIVLFA 161
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIEN 529
SADRP TESE FL ++W KK+V +LNK D+ ELE+ + F++EN LL I
Sbjct: 162 TSADRPFTESERNFLALIKEWGKKIVIILNKIDILSPP-ELEQVLHFIRENARDLLGI-T 219
Query: 530 VTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGK 589
I+PVSAR L S + G + E + W + F +E+ + LD +
Sbjct: 220 PDIFPVSAREALR-----SRSTGGEEGE-----ALWANSRFSAVEEYVVDHLDEET---- 265
Query: 590 ERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISW 649
R+RLKL +P+ +A+RL S + ++DL + + Y ++++ +
Sbjct: 266 -RVRLKLLSPLGVAQRLSSKYLQATEGLLETLREDLVTIENIEQQMTLYREDLKNDVQYY 324
Query: 650 RRKTLSLIDSTKSRVVKLIESTLQISNL-DIVASYVFRGEKSAAMPSTSRIQHDIIGPAL 708
+ ++ R E ++IS L D++ + R + Q D L
Sbjct: 325 LNEIDVILRDLVDRGDYFFEEHIRISRLRDLMRGDLLRAAFEREVVGNVSEQIDQKMHTL 384
Query: 709 LDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSR 768
+D + E + LQ N +R N+ V + ++ V +S
Sbjct: 385 ID---WMVEKNLRLQQSNDEYIKRRASQHSNKIIGSV--GGNFDYNRRTMLETVGRAASE 439
Query: 769 VIEDFSASSTSKMFEQEIREVFLGT-FGGLGAAGLSASLLTSVLPTTLED---LLALGLC 824
V+ + S++ ++R T +GA GL +LL ++ T L D ++A L
Sbjct: 440 VVASYDKEIESQILADDVRASVAATALAEVGAVGL-GTLLVALFHTALLDVTGIMAATLV 498
Query: 825 SAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQ 884
+AGG+ A PA+R++ + + L +++ ++ + V N V + P+
Sbjct: 499 AAGGF---ALLPAKRRQAKKALRDRVGELRQQLRSSVMAQFEREVERSINQVHERNAPFT 555
Query: 885 DAAQLKLDRLSEIQDELSNVQEKIQTLQVEI 915
+ + +LS++Q +++ ++ L+ EI
Sbjct: 556 RFVRAQRGQLSDLQQGFADIDAGLERLRKEI 586
>gi|269836718|ref|YP_003318946.1| dynamin family protein [Sphaerobacter thermophilus DSM 20745]
gi|269785981|gb|ACZ38124.1| Dynamin family protein [Sphaerobacter thermophilus DSM 20745]
Length = 588
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 167/604 (27%), Positives = 281/604 (46%), Gaps = 49/604 (8%)
Query: 322 REKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVI 381
RE+++ + ++ E I++ E++ LL DA ++ FLLVI GE+NSGKS+V+
Sbjct: 16 REEEMRQRAAGIVEELARTIRQFPAEAEDLDLLRDAAERLGALFLLVIAGEFNSGKSAVV 75
Query: 382 NALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVD 441
NALL + +GV PTT+ I LR+ +E DG P+ L+++ +VD
Sbjct: 76 NALLNDTVMPEGVTPTTSAIHILRYGPSTNEVV-----GIDGIVEHTYPADFLRDVNLVD 130
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKS 501
TPGTN I++ + L++ FVPRADLVLFV SADRP TESE F+ + W KK+V VLNK
Sbjct: 131 TPGTNAIIREHEALSQRFVPRADLVLFVTSADRPFTESERQFMTEIRGWGKKIVVVLNKI 190
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVN 561
DL +N E+ E I F++ N+++LL +E I+PVSAR EA+ +S ++ L
Sbjct: 191 DLLRNDEEIAEVIEFIRTNSVRLLGLEP-QIFPVSARLAREAQ---TSEAPEERERL--- 243
Query: 562 DSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDA 621
W + F LE+ + S LD + R+RLKL P+ IA+R+ + +
Sbjct: 244 ---WAASRFGALEEFILSTLDEQT-----RIRLKLLNPLGIADRVGGRYRAIAAERLDLL 295
Query: 622 KQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVA 681
+DL + + + +M ++ ++ + +++ R + + T+++
Sbjct: 296 DRDLQTIERIEQRIAVFESEMRADFTAYLSRIEAIVYRMNERADRFFDRTIRLGR----- 350
Query: 682 SYVFRGEKSAAMPSTSRIQHDIIGPALLDTQK----LLGEYTMWLQSKNAREGRRYKESF 737
VF + RIQ + + DT++ + E W+ ++ R + E
Sbjct: 351 --VF------DLLDRERIQREFEQEVIADTEQQIDAAVAEMIDWMVERDLRLWQSVTEYI 402
Query: 738 ENRWPSLVYLQPQVYP--------DMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREV 789
+ R L Q +V D L+ V + V+E F +++ + +R
Sbjct: 403 DRR--QLDRHQDEVVGESGAQFTYDRQALLGAVARRAGEVVEQFDPGREAQVIAEALRGA 460
Query: 790 FLGT-FGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNK 848
T +GA GL A+++ ++ L + GG + + PAR++ E + +
Sbjct: 461 VTQTAVAEVGAIGLGAAVIALATTAAMDVTGILAAVTVGG-LGLLILPARKRHARELLRR 519
Query: 849 IADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKI 908
+ L + EA+ V V PY + + DR + L V I
Sbjct: 520 RSVELRERLAEALSDQFDREVRRSTARVRDALSPYATFVRTERDRFQRLAQALEAVDADI 579
Query: 909 QTLQ 912
L+
Sbjct: 580 TELR 583
>gi|156741362|ref|YP_001431491.1| dynamin family protein [Roseiflexus castenholzii DSM 13941]
gi|156232690|gb|ABU57473.1| Dynamin family protein [Roseiflexus castenholzii DSM 13941]
Length = 585
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 283/581 (48%), Gaps = 53/581 (9%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL 409
+V +L DA++ +DE FLLV+ GEYNSGKSS INAL+G + +GV PTT+ IT LR+ D+
Sbjct: 44 DVRILDDAIAHLDELFLLVVAGEYNSGKSSFINALIGAPVVAEGVTPTTDRITVLRYGDM 103
Query: 410 ASEEQQRCERHPDGQYIC--YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
E G ++ P+ +L+ M IVDTPGTN I+QR + LT +F+PRADLVL
Sbjct: 104 PGE-------MVGGAFLVEYRFPAEVLRRMAIVDTPGTNAIIQRHEELTRDFIPRADLVL 156
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNI 527
FV SA +P + SE FL + W KKVV ++NK+DL +A L E ++FV + L +
Sbjct: 157 FVTSASQPFSASERSFLELIRDWGKKVVIIVNKADLLDDA-GLAEVVAFVGRHAEDLFGV 215
Query: 528 ENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSST 587
I+ VS+R +A+ A+ W + F +E+ + LD
Sbjct: 216 RP-EIFAVSSRLARQARDDDDQAL-------------WDASRFPAIEQYISDTLD----- 256
Query: 588 GKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMID-SLKEYVMKMESES 646
++R+RLKL +P+ +A RL + ++D A +D A E I+ L+++ + +
Sbjct: 257 EEQRVRLKLLSPLGVARRLAERY-LIAVEDRLAALRDDVAAIENIERQLEQFRSDLADDF 315
Query: 647 ISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGP 706
R + ++++ + R ++ + T+++SNL +A + + E S A DI+
Sbjct: 316 QRHRAEIANILNEFELRGMQFFDETIRVSNLFHLARH--QQEISEAFA------RDIVAD 367
Query: 707 ALLDTQKLLGEYTMWLQSKNAR------EGRRYKESFENRWPSLVYLQPQVYPDMYELVR 760
+ L W+ KN R + R + + ++R + + + L+
Sbjct: 368 VPQQIEARLQALIDWMVEKNLRIWQGVMDYLRRERAVQHRSGLIGEIGGTFEYNRNALIE 427
Query: 761 KVDGYSSRVIEDFSASSTSKMFEQEIREVFL-GTFGGLGAAGLSASLLTSVLPTTLE--D 817
V + +++ + + ++ E+R T G GA G+ A L+ + L+
Sbjct: 428 SVAREAEKIVATYDREAEAQALTDEVRAAIASSTLVGAGAVGIGALLVLLLHGALLDVTG 487
Query: 818 LLALGLCSAGG-YIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFV 876
+L G+ + GG YI P +R+++ + ++ L + M++ + + +
Sbjct: 488 VLVAGVLALGGLYI----IPNKRRQIKRQFHQRVADLRETLTATMERQFNAELDRMITRI 543
Query: 877 TKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQN 917
PY + D L Q ELS+ + +I LQ E++
Sbjct: 544 RDAIDPYTRFVYTQHDHLLTTQRELSDAEAEISRLQAEVER 584
>gi|290977935|ref|XP_002671692.1| predicted protein [Naegleria gruberi]
gi|284085263|gb|EFC38948.1| predicted protein [Naegleria gruberi]
Length = 688
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 172/625 (27%), Positives = 312/625 (49%), Gaps = 55/625 (8%)
Query: 319 FEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
F +E ++E+E++ L + +I+ E++ LL +++Q++E FL+VIVGE+N+GKS
Sbjct: 87 FSKKEIMILESEKTALGHLLKIIENVEGSEEDIDLLRKSINQLEEHFLMVIVGEFNAGKS 146
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICY-LPSPILKEM 437
S INA+LG RYL++G+ PTT + +R Q+ ER+ Q + LP LK +
Sbjct: 147 SFINAMLGDRYLREGITPTTAHLHVIRHG--GDSNQKFDERN---QLVNMELPLKWLKGI 201
Query: 438 IIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
+VDTPGTN I++ Q +TE FVPRADL++F+ SA+RP +ESE FL ++W KKVV
Sbjct: 202 SVVDTPGTNAIIKEHQTITETFVPRADLIIFLTSAERPFSESEHTFLEMIRKWGKKVVVC 261
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLS--VSSAVGKDH 555
+NK DL QN E +E FV++ ++LL E I+ VSARS ++ K S +SS + +
Sbjct: 262 INKYDLLQNEKEQDEVEVFVRDGIIRLLGFEP-KIFCVSARSAMDFKQSSRISSFLAPEE 320
Query: 556 SELSVNDSHWRI--NTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIA----ERLLSS 609
EL+ ++ N D LEK + L+ ER +LK +P+ +A E+ L++
Sbjct: 321 RELAEKQKKTKLAENWLD-LEKYVLDTLNSI-----ERAKLKFLSPLGVAQNLSEKYLTT 374
Query: 610 CETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIE 669
+K ++ K+ + + E L+ + M+ + + K ++ R +
Sbjct: 375 NIEERLKVLKEDKKTMEIIEE---QLQVFYNDMKQDFELQQAKLENIFHELSERGTGFYD 431
Query: 670 STLQISNL-DIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAR 728
+ + +SN+ ++ S + E Q +I + + E W+ + R
Sbjct: 432 NFVNLSNISSLIKSKIVAEE----------FQTQVIANTATQIENHVSEVIDWIIDRKYR 481
Query: 729 EGRRYKESFENRWPSLVYLQPQVYPDM--------YELVRKVDGYSSRVIEDFSA--SST 778
+ + + F N+ + + ++ + EL+ K+ + + + + T
Sbjct: 482 QWKAVTD-FANKRARISLHEDKLVGTLSSDFQFNRKELLLKIGTTAENAVRSYDKEHNDT 540
Query: 779 SKMFEQEIREVFLGTFGGLGAA---GLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANF 835
K+F EI T +A G+S++LL ++ + AGG A+
Sbjct: 541 EKLF-SEIASGLKATAAVEVSAITIGVSSALLMPTAAMAGAGVVGALMVGAGGLYALPYK 599
Query: 836 PAR-RQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRL 894
A R+ I +VNK+ + L + + E +++L ++ ++N +T PY + + ++
Sbjct: 600 RATMRKNFIREVNKLKEVLKQRMREEFERELLSSIDSIKNSIT----PYSRFVKAEHEKF 655
Query: 895 SEIQDELSNVQEKIQTLQVEIQNLH 919
S ++ L +Q+ I ++ EI++L
Sbjct: 656 STQKERLIELQKVINQIRKEIESLQ 680
>gi|428162465|gb|EKX31607.1| hypothetical protein GUITHDRAFT_166857 [Guillardia theta CCMP2712]
Length = 796
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 224/381 (58%), Gaps = 22/381 (5%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
D+ L+ E + + +++ + +++LL+D ++ F +V+VGE+N+GKSS+
Sbjct: 209 DKVDALVRDETAFIESMCELLAELDAKDRDITLLLDMKDRLVLLFSVVVVGEFNAGKSSL 268
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIV 440
INA+LG ++ ++GVVPTT I LR+ EE + +R+ D Q + +LP +L+++ +V
Sbjct: 269 INAILGSKFCEEGVVPTTTTINMLRYG--TGEESGKKQRNKDYQEL-FLPVELLRQVTLV 325
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
DTPGTN I++ Q RLT+ F+P++DL++FV SA+RP+TE+E L Y ++W KKVV VLNK
Sbjct: 326 DTPGTNAIIKEQTRLTKGFIPQSDLIIFVTSAERPITETEGKLLEYIREWGKKVVMVLNK 385
Query: 501 SDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL--SVSSAVGKDHSEL 558
DL+ + LE+ FV+EN ++L +E ++ ++ R L++KL + SA K +L
Sbjct: 386 VDLFDSEENLEKVKQFVRENAARILGVEP-PVFGIAGRLALQSKLMQADKSADPKAAEDL 444
Query: 559 SVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDC 618
W+ + F++LE S++ + + KE +LKLE+P+ +AER L + +
Sbjct: 445 ------WKESRFEELE----SYVVRTLTDKKEAAKLKLESPLGVAERFLVNYKKASELGN 494
Query: 619 QDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSR----VVKLIESTLQI 674
Q + D + N++ S++ Y ++ESE ++ S+++S + R K++ T
Sbjct: 495 QITEDDKQVLNQIKQSIEVYEAEIESEMNFQLKRLDSILNSVQQRAKTTTSKVLSGTYIA 554
Query: 675 SNL--DIVASYVFRGEKSAAM 693
SN+ + S GE AAM
Sbjct: 555 SNIVGCLTKSKSIEGELEAAM 575
>gi|219849099|ref|YP_002463532.1| dynamin family protein [Chloroflexus aggregans DSM 9485]
gi|219543358|gb|ACL25096.1| Dynamin family protein [Chloroflexus aggregans DSM 9485]
Length = 587
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 265/522 (50%), Gaps = 52/522 (9%)
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE 418
+ + E FL+V+ GE+NSGKS+ +NALLG + L +GV PTT+ IT L++ +E
Sbjct: 56 ASLRELFLIVVAGEFNSGKSTFLNALLGAQVLPEGVTPTTDAITLLKYGPEPFDELI--- 112
Query: 419 RHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
P G + + P+ IL+++ +VDTPGTN +++ +RLT +++PRADLV+F+ SADRP TE
Sbjct: 113 -EP-GLRLHHYPADILRQLTVVDTPGTNAVIRHHERLTRDYIPRADLVIFLTSADRPFTE 170
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
SE FL ++W KK+V V+NK+D+ A E ++ FV+E+ ++L ++ ++ VSAR
Sbjct: 171 SERAFLELIKEWGKKIVVVINKADILTTA-EQDQVAQFVREHVNRVLE-QSPELFMVSAR 228
Query: 539 STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLET 598
L+A+ + D W+ + +E + LD + R RLK+ +
Sbjct: 229 RALQARQQTGNGA----------DEQWQASGMAAIEHFVIDTLDEET-----RFRLKVLS 273
Query: 599 PIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLID 658
PI +A R+ + T + D+ +++ L + ++ ++ + + ++
Sbjct: 274 PIGVARRITTKYLTATEDRLATLRDDIHALDQIDRQLALFGDELRQDAEYYLAEIDHVLT 333
Query: 659 STKSRVVKLIESTLQISNL-DIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGE 717
S + R + + T++++ + +++ + R AA T +IG A K + +
Sbjct: 334 SLQERGERFCDETIRLTRIRELIDADRLR----AAFEET------VIGDAYQQIDKQVQK 383
Query: 718 YTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYP-------DMYELVRKVDGYSSRVI 770
WL KN R + E + R +L Y + V + L+ ++ + I
Sbjct: 384 LIDWLMEKNLRLQQSVDEFIQQR--TLAYREQIVGSVGGSFAYNRQALLERIGQAAHTAI 441
Query: 771 EDFSASSTSKMFEQEIREVFLGT-FGGLGAAGLSASLLTSVLPTTLEDLLAL--GLCSAG 827
+ + ++ E++ T G+GA GL A+L+ ++ T L D+ + L AG
Sbjct: 442 AGYDRQAEAQQLAGELQSSVAATAITGVGALGLGATLV-AIFHTVLLDMTGILAALTVAG 500
Query: 828 GYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETV 869
+ +A PA+R++ E + K D E+ E ++K L++ +
Sbjct: 501 --LGLAILPAKRRQAKETLRKKID----EVREQLRKGLRQQI 536
>gi|269925748|ref|YP_003322371.1| dynamin family protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789408|gb|ACZ41549.1| Dynamin family protein [Thermobaculum terrenum ATCC BAA-798]
Length = 589
Score = 189 bits (480), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 162/613 (26%), Positives = 298/613 (48%), Gaps = 59/613 (9%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
+ + +L+ ER + E ++ ++ ++ L+ + ++E FLLVIVGE+NSGKS+
Sbjct: 11 EEQNELLRRERQLFSELLEFLRSFDAPRNDIELVEQTLGDLEELFLLVIVGEFNSGKSAF 70
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIV 440
IN+LLG+ +GV PTT+ IT LR+ A E +R DG P +L+E+ IV
Sbjct: 71 INSLLGRDIEPEGVTPTTDRITLLRW---AHENYERV--RGDGVLERGQPIDLLREVAIV 125
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
DTPGTN I++ + L++ FVPR+DLVLFV S DRP TESE +L ++W KK++ ++NK
Sbjct: 126 DTPGTNAIIRHHEELSKGFVPRSDLVLFVTSVDRPFTESEREYLEIIKEWGKKLIVIVNK 185
Query: 501 SDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSV 560
+DL + E F++ N LL I I+ VS++ AK++ S
Sbjct: 186 TDLLSTKEDAENIKEFIQSNMQSLLGI-TPPIFLVSSKLARRAKVADSQI---------E 235
Query: 561 NDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQD 620
D+ ++ + F++LE+ + L+ S+ R+RLKLE+P+ +A++L+S TL + +
Sbjct: 236 RDALYKASGFEELEEYILGILEESN-----RIRLKLESPLGVADQLVSRY-TLGINERMS 289
Query: 621 AKQDLTLANEMIDS-LKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDI 679
+D E ID+ L+ Y M+ + S R + +LI R K E ++I
Sbjct: 290 LLEDDFRMTENIDAQLEIYKEDMQRDFSSRRAEIENLIHQLNERGDKWFEENIRIGRF-- 347
Query: 680 VASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNARE--------GR 731
E R Q +++G + + E W+ ++ R+ R
Sbjct: 348 -------FELVKKNEVQQRFQKEVVGDTTEVIDRHIQELVDWMVDRDLRQWKSIVDYVNR 400
Query: 732 RYKESFENRWPSLV-----YLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEI 786
R + ++++ + Y + Q+ + + KV R ++ AS + + +
Sbjct: 401 RRQATYDHNLIGEIGGNFEYNRNQLLQSIAQDANKVVQSYDR---EYEASKLALSIQSAV 457
Query: 787 REVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKV 846
+ G +G L A L T+ T D+ L S + + P +R++ +
Sbjct: 458 AQTVAMEVGAVGLGTLVAMLATA----TAVDVTGLLAASTIAVLGLFVIPNKRRKARNEF 513
Query: 847 NKIADGLAREIEEAMQK----DLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELS 902
+ L +++ E + + +LQ ++ + + PY + + ++S+ +D LS
Sbjct: 514 RSRTEELRQKLIEVLTRQFGLELQRSIERIREAIA----PYTRFVRSEYQKMSKARDVLS 569
Query: 903 NVQEKIQTLQVEI 915
++++++ L+++I
Sbjct: 570 EIKKEVEDLRIQI 582
>gi|328874646|gb|EGG23011.1| hypothetical protein DFA_05141 [Dictyostelium fasciculatum]
Length = 711
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 284/592 (47%), Gaps = 60/592 (10%)
Query: 356 DAVSQIDEP-FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ 414
+A+ Q+D+ FLLVIVGE+NSGKSS +NALLG YLK+G+ PTT++I + + D +Q
Sbjct: 150 EALEQLDDSLFLLVIVGEFNSGKSSFLNALLGDTYLKEGITPTTSKINIITYGD----KQ 205
Query: 415 QRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
Q LP L ++ +VDTPGTN I++ Q +TE FVPR+D+VLFV S DR
Sbjct: 206 AVAPGRNSEQENIGLPVQWLADIGLVDTPGTNAIVRSHQEITEHFVPRSDMVLFVTSVDR 265
Query: 475 PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN-------AFELEEAISFVKENTMKLLNI 527
+ESE FL ++W KK+V VL+K+DL ++ A +L E FV+EN + +
Sbjct: 266 AFSESERKFLESIKRWGKKIVVVLSKADLVESNPMSANPAADLCEVEQFVQENFKNTVGV 325
Query: 528 ENVTIYPVSARSTLEAKLSVSSAV-GKDH-------SELSVNDSHWRINTFDKLEKLLYS 579
TI+PVS++ L+AKL V+ G+ H +EL D W+ + F LE +
Sbjct: 326 A-PTIFPVSSKLALKAKLRVAKETGGQQHVGSDTYDAELK-RDVGWKQSRFADLENFIMK 383
Query: 580 FLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYV 639
LD ER RLKL P+ +A +L + + DL + L+++
Sbjct: 384 TLDSG-----ERTRLKLLNPLGVASHVLGGLSGEIDTRARVLSTDLKTLQYVEAQLEQFR 438
Query: 640 MKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISN-LDIVASYVFRGEKSAAMPSTSR 698
++M+ + ++ +++ ++R ++ +Q +N L+++ S + + +
Sbjct: 439 IEMQKDLEFHLQRIDNVLLKMETRADAFLDDQIQFTNILNLLKSEMVK----------LK 488
Query: 699 IQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENRWPS-------LVYLQPQV 751
+ ++IG + + WL KN+++ R + R S V
Sbjct: 489 FEKEVIGTTTHEIDSHISSLIDWLVEKNSKQWRDIMSYVDARSSSRLEQLIGTVNRSGDF 548
Query: 752 YPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGTFG-GLGAAGLSASLLTSV 810
L+ +V +S ++ ++ + EIR T +GA GL + S+
Sbjct: 549 LNSRKNLLEQVSASTSSTLQSYNREDEATKISSEIRNTIFKTAAIEVGAVGLGTIITASL 608
Query: 811 LPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVN-KIAD---GLAREIEEAMQKDLQ 866
L L+ A +A P ++ + + V+ KIAD L+ + + +L+
Sbjct: 609 LD------LSGIGIGALALGGLALLPIKKNSLKKSVHSKIADLRFNLSNVMRVHFEAELE 662
Query: 867 ETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQNL 918
+ +++ ++ P+ ++ RL+ Q ++ + E IQ+++ +I L
Sbjct: 663 SGIQKMKDGIS----PFSSYVNIENKRLNLSQSKVKDYSETIQSIRHDIDRL 710
>gi|328951123|ref|YP_004368458.1| small GTP-binding protein [Marinithermus hydrothermalis DSM 14884]
gi|328451447|gb|AEB12348.1| small GTP-binding protein [Marinithermus hydrothermalis DSM 14884]
Length = 542
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 164/607 (27%), Positives = 291/607 (47%), Gaps = 73/607 (12%)
Query: 319 FEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
E + + L + R +L A++ + ++ + + L A+ ++ PFLL +VGE+NSGKS
Sbjct: 2 LEPQLQTLAQEVRDLLGRAVEALAQSGA---DAAPLRQALLDLEGPFLLAVVGEFNSGKS 58
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE-RHPDGQYICYLPSPILKEM 437
S++NALLG+ L+ GV PTTN I + + + R E R PD + +LP P+L+E+
Sbjct: 59 SLLNALLGRELLEVGVTPTTNRIQLIGYGP-----EPRVEVRGPDLAEV-WLPHPLLREV 112
Query: 438 IIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
+VDTPGTN +L+R Q LTE F+PRADL+LFV SADRP TESE FL + W KK+V V
Sbjct: 113 RLVDTPGTNAVLERHQLLTERFLPRADLILFVTSADRPFTESERRFLELVRGWGKKLVLV 172
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSE 557
+NK DL A E EE + +V+ + + L + V ++ SAR+ G+
Sbjct: 173 VNKLDLLTPA-EAEEVLGYVRTHVQRALE-DPVPLFGTSARN------------GQGVPA 218
Query: 558 LSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKL-ETPIRIA--ERLLSSCETLV 614
L ++H R + +L G + ER R +L E R+A E + S E L+
Sbjct: 219 L---EAHIRDTLAYQAARLKLGAPLGVARKLVERARARLDEEAARLAREEEVCRSLEALL 275
Query: 615 MKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTK--SRVVKLIESTL 672
+ + ++ + V ++E R+ + +D T RV+ L+ +
Sbjct: 276 ERHAAGVR----------EAFRGQVAQLEGVFAQAVRRGEAWLDETVRLGRVLDLLNAA- 324
Query: 673 QISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRR 732
+ A + + +++ PA ++ + E WL REG
Sbjct: 325 -----KVQAGF----------------EREVLVPARAQLEQRIQEALAWLAR---REGDL 360
Query: 733 YKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLG 792
+ + E + +P P L R V R + A ++ + +++ L
Sbjct: 361 LETALELLKQTAGPARPAPSPAGPPLERTVRAALERYRPEEEAQEVQRLLQGALQQTALA 420
Query: 793 TFGGLG-AAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIAD 851
G +G AGL+ +L L + ++A GL +A + ++ P R++ ++ + ++
Sbjct: 421 EAGAVGLGAGLTLAL--HGLAADVTGVVA-GLVAA--LLGLSILPRRKEAAKRRLRQRSE 475
Query: 852 GLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTL 911
G+ RE+ A++ L+ + + ++ +P+ + + RLS ++ L ++++ + L
Sbjct: 476 GMQRELAAALEATLEGELLRIHERFRRLYRPHCAQVEAQTARLSAARETLEALRKETERL 535
Query: 912 QVEIQNL 918
+ I+ L
Sbjct: 536 EARIEAL 542
>gi|66807039|ref|XP_637242.1| hypothetical protein DDB_G0287331 [Dictyostelium discoideum AX4]
gi|60465654|gb|EAL63733.1| hypothetical protein DDB_G0287331 [Dictyostelium discoideum AX4]
Length = 711
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 171/648 (26%), Positives = 294/648 (45%), Gaps = 115/648 (17%)
Query: 345 SPLMEEVSLLIDAVSQI-DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF 403
SPL + D++ Q+ D FLLV+VGE+NSGKSS +NALLG RYLK+G+ PTT+ I
Sbjct: 99 SPLASSLGSFKDSIDQLKDNSFLLVVVGEFNSGKSSFLNALLGDRYLKEGITPTTHRINR 158
Query: 404 LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA 463
+ F + S+ I LP LKE +VDTPGTN +++ Q +TE F+P++
Sbjct: 159 IEFGETISQHTIPSRLSNTEHEIIQLPVEWLKEFSLVDTPGTNAVIEGHQEITEHFIPKS 218
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN-------AFELEEAISF 516
DLVLFV S DR +ESE +FL ++W KK+V +++K+DL +N EL E I+F
Sbjct: 219 DLVLFVTSIDRAFSESEKIFLEKVKKWGKKIVVIISKTDLIENNPLSSNAQSELNEVINF 278
Query: 517 VKENTMKLLNIENVTIYPVSARSTLEAKLSV---------------------------SS 549
VK+N LN+E + I+P+S++ L+AKL + S+
Sbjct: 279 VKDNFKSQLNVEPM-IFPLSSKLALKAKLELSSSINNLNNNLNNNNNSSNINYNNLLSST 337
Query: 550 AV------------GKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLE 597
+V K + EL N+ +W+ + F LEK + LD + ER++LKL
Sbjct: 338 SVEPNNINNNNKYTQKFYQELE-NNINWKKSKFLDLEKYILQSLDSN-----ERVKLKLL 391
Query: 598 TPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLI 657
P+ +A++L S + D N + + E+ + + + R L I
Sbjct: 392 NPLGVADKLYSEFDEEYRSQQSVLDFDFENINLAVAQINEHQIDLNKD----LRHQLERI 447
Query: 658 DS----TKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQK 713
D+ ++R +++ +Q SNL + RGE+ ++ + +I + ++
Sbjct: 448 DTILLRMENRANTFLDNEIQFSNL----LKLLRGEEIR-----NQFEKHVIDGTNQEIEQ 498
Query: 714 LLGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYE----LVRKV----DGY 765
L+ + KN + RW S++ L Q + + +R D
Sbjct: 499 LVRNLVDNIVDKNTK-----------RWKSIIDLINQKSSNKSQKVVGFIRDTHDSSDFS 547
Query: 766 SSR--VIEDFSASST---------------SKMFEQEIREVFLGTFGGLGAAGLSASLLT 808
S+R I D +T S+ + I + L G +G A
Sbjct: 548 SNRQQTINDMGERTTKTLSSYDRDNESLLVSRDIKNAIYQAILFEAGTVGVA-------- 599
Query: 809 SVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQET 868
++L T DL + A +A P ++ ++ ++ L ++ + +Q + E
Sbjct: 600 TILSTAFFDLTGVLGIGALAITGLAWVPFKKAQLKRSISSKITNLRLQLHDTIQDHIGEE 659
Query: 869 VGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEIQ 916
+ N + +PY D + +++++ +L +++ QTL +I+
Sbjct: 660 IRISSNKIQLGIQPYIDFTNNESKKINDLSIKLGECKDERQTLIYDIE 707
>gi|163846540|ref|YP_001634584.1| dynamin family protein [Chloroflexus aurantiacus J-10-fl]
gi|222524328|ref|YP_002568799.1| dynamin family protein [Chloroflexus sp. Y-400-fl]
gi|163667829|gb|ABY34195.1| Dynamin family protein [Chloroflexus aurantiacus J-10-fl]
gi|222448207|gb|ACM52473.1| Dynamin family protein [Chloroflexus sp. Y-400-fl]
Length = 587
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 271/566 (47%), Gaps = 43/566 (7%)
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE 418
+ + E FL+V+ GE+NSGKS+ +NALLG + L +GV PTT+ IT L++ +E
Sbjct: 57 TSLRELFLIVVAGEFNSGKSTFLNALLGAQVLPEGVTPTTDAITLLKYGSEPFDELV--- 113
Query: 419 RHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
P G I + P+ +L+++ +VDTPGTN +++ +RLT +F+PRADLV+F+ SADRP TE
Sbjct: 114 -EP-GLRIHHYPAEMLRQLTVVDTPGTNAVIRHHERLTRDFIPRADLVIFLTSADRPFTE 171
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
SE FL + W KK+V V+NK D+ A E E+ FV+++ ++L + ++ VSAR
Sbjct: 172 SERAFLELIKDWGKKIVVVINKIDILTQA-EQEQVAQFVRDHVNRVLE-HSPELFLVSAR 229
Query: 539 STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLET 598
L+A+ +V W+ + E + LD + R+RLKL +
Sbjct: 230 RALQARQQTDDSV-----------EQWQASGMAAFEHFVVDTLDEET-----RLRLKLLS 273
Query: 599 PIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLID 658
P+ +A R+ D+ +++ L + +++ ++ + ++
Sbjct: 274 PLGVARRITGKYLAATEARLATLSDDIQAIDQIERQLAFFGDELKQDAEYHLNEIDQVLT 333
Query: 659 STKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEY 718
+ ++R + + T+++S + + G + A + ++IG + + +
Sbjct: 334 TLQARGEQFCDETIRLSRI----RELIDGNRLRAA-----FEQEVIGDTYQQIDQRIQKL 384
Query: 719 TMWLQSKNAREGRRYKESFENRWPS-----LVYLQPQVYPDMYELVRKVDGYSSRVIEDF 773
WL KN R + E + R + L + + L+ + + I +
Sbjct: 385 IDWLVEKNLRLQQSVDEFIQRRALAHRDHMLGEVGGSFAYNRQALLENISQAAQNAIAGY 444
Query: 774 SASSTSKMFEQEIREVFLGT-FGGLGAAGLSASLLTSVLPTTLEDLLAL--GLCSAGGYI 830
+ + ++ E++ T GLGA GL A+L+ +V T L D + L AG +
Sbjct: 445 NRQTEAQQLAGEVQSSVAATAITGLGAVGLGATLV-AVFHTVLLDFTGILAALTVAG--L 501
Query: 831 AVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLK 890
+A PA+R++ E + K D + ++ +++ ++ H + + P+ + +
Sbjct: 502 GLAILPAKRRQAKESLRKKIDEVRAQLRTELRQQIERESEHTLRQIRERNAPFVRFVRAQ 561
Query: 891 LDRLSEIQDELSNVQEKIQTLQVEIQ 916
+ L +Q S++ I+ +++
Sbjct: 562 QEHLVGLQRTFSDLTVAIEKFSKQVE 587
>gi|291295301|ref|YP_003506699.1| dynamin family protein [Meiothermus ruber DSM 1279]
gi|290470260|gb|ADD27679.1| Dynamin family protein [Meiothermus ruber DSM 1279]
Length = 548
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 261/550 (47%), Gaps = 71/550 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
R++L + +D + + + L A+ ++ PFLLV++GEYNSGKSS++NALLG+ +L
Sbjct: 14 RALLAQGLDTLARVGL---DTEALKQALLDLEGPFLLVVIGEYNSGKSSLLNALLGEDFL 70
Query: 391 KDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQ 450
K+GV PTT+ I + + + Q E + LP P+LK++ +VDTPGTN ILQ
Sbjct: 71 KEGVTPTTDRINLIGYGPEPKLQPQSPE-----LVLVQLPHPLLKDLRLVDTPGTNAILQ 125
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
Q LTE+F+PRADL+LFV SADRP T+SE FLR + W KKVV V+NK DL A EL
Sbjct: 126 HHQVLTEQFLPRADLILFVTSADRPFTQSEADFLRLIRAWGKKVVLVINKIDLLSEA-EL 184
Query: 511 EEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTF 570
++ + FV++ + L + ++ VSAR + + + S
Sbjct: 185 QQVLEFVRKAADQTLG-QIPPLFAVSARRARQGETAASR--------------------V 223
Query: 571 DKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANE 630
+LE + L+ +++ +KL +P+ + L + + ++A++ L +E
Sbjct: 224 PELEAHIRQVLNHEAAS------IKLGSPLGVLAHLADDAKPALEARLKEAEKQLATCHE 277
Query: 631 MIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISN-LDIVASYVFRGEK 689
+ L+ + + + L ID ++R + ++ ++ S L+++ S +
Sbjct: 278 LDHLLQRHEERTRRDFSGQVALALQAIDEVRARGERWLDEKVRFSRFLELLQSSKLK--- 334
Query: 690 SAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFEN------RWPS 743
+++ A + ++ + E WL RR +E E+ P
Sbjct: 335 -------QSFIDEVVKGANQEIERRVLEAMNWL-------ARRDRELLEDALVLLREAPG 380
Query: 744 LVYLQPQVYPDMYELVRKVDGYSSRVIEDFSASSTSKMFEQEIREVFLGT-FGGLGAAGL 802
L + + Q P+ R + G + F A + + I+E GT +G GL
Sbjct: 381 LRHAE-QAGPEE----RTIAGNLEEALRSFDAEAEAIQLRDFIQESLRGTALAEVGVMGL 435
Query: 803 SASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQ----RVIEKVNKIADGLAREIE 858
++L D+L + G +A + P R++ R+ E++ ++ + L + +
Sbjct: 436 GLTILLVAQKIAF-DILGIFATVFGAILATSILPRRKEVAKARLRERLTELKNTLEQALS 494
Query: 859 EAMQKDLQET 868
E + ++ T
Sbjct: 495 ETLNTEMHRT 504
>gi|452819736|gb|EME26789.1| dynamin family protein [Galdieria sulphuraria]
Length = 745
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 182/682 (26%), Positives = 318/682 (46%), Gaps = 104/682 (15%)
Query: 300 LLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEE--VSLLIDA 357
L TSNS K E + L+ ER VL + ++K P E ++LL +
Sbjct: 66 LCQTSNSTLNKLS-------EIADADLVRRERFVLQGFLSTLEKF-PYKNERDINLLKEV 117
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
+ ++D FLLV+VGE+NSGKSS+INALLG +L G PTT +++ ++ +S +
Sbjct: 118 IRRLDGLFLLVVVGEFNSGKSSLINALLGGHFLPQGPTPTTAQVSLVKGPYSSSPD---A 174
Query: 418 ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLT 477
+ + +I +P P LK M IVDTPGTN I Q + LT+EFVPRADL+LF SADRP +
Sbjct: 175 DNYEADYHIYSVPVPWLKYMNIVDTPGTNAIEQAHEILTKEFVPRADLILFTTSADRPFS 234
Query: 478 ESEVVFLRYTQQWKKKVVFVLNKSDLYQ-----NAFELEEAISFVKENTMKLLNIENVTI 532
ESE FL + W KKV+ VLNK DL N ++ + +V+++ ++ + I
Sbjct: 235 ESERRFLEEIRNWGKKVIIVLNKIDLLMDSDQPNKDSVQAVVHYVRDHA-RIWVGSDPQI 293
Query: 533 YPVSARSTLEAK------LSVSSAVGKDH--SELSVNDSH-WRINTFDKLEKLLYSFLDG 583
+PVS+R L AK + +++ ++H S + +H + F LE + LD
Sbjct: 294 FPVSSRLALLAKERLHPTTTTTTSSSRNHMDSNTMLEANHLLEASRFPSLEAFITKTLD- 352
Query: 584 SSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKME 643
+ER ++KLETP+ +A+ + + +TL+ ++DL +++ +SL+ Y
Sbjct: 353 ----DRERWKIKLETPLALAQSMQKTYQTLIKSRKDILEKDLLCISDIQESLQMYREDFN 408
Query: 644 SESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDI 703
ES S + ++I + R + +Q+ + + R +S + S +
Sbjct: 409 RESQSQLVRIDNIILRLQQRASQFFYERIQLR----YSIPLLRNNQSLSPELES-----V 459
Query: 704 IGPALLDTQKLLGEYTMWLQSKNAREGRRYKESFENR-------------------WP-- 742
+G ++ ++ + WLQ KN R + +++R W
Sbjct: 460 LGNTAVELEQEVLAMVGWLQEKNRRHWKEISRLYDHRLNCRQRELEPTHSSSESGSWNGH 519
Query: 743 --------SLVYLQPQVYPDMYELVRKVDGYSSRVI--------------EDFSASSTSK 780
SL ++ ++ D +++ D S R + E FS+ ++
Sbjct: 520 WVSALQDLSLNWISKEM--DDWDM----DAESKRQMTLTELKRASTDLWHEKFSSQEEAQ 573
Query: 781 MFEQEIREVFLGTFGG-LGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARR 839
+R+ L F GA GL +L S+L T D+ + A + FP R+
Sbjct: 574 RLVLHVRKSLLTMFSAQAGALGLLGTL--SILSTL--DISGIIFTCALAIASTGVFPYRK 629
Query: 840 QRVIE----KVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLS 895
++ + K+++ L EIE+ ++ L + + +EN + P+ + + +
Sbjct: 630 KQFLRTFHSKMDQFRHALREEIEKELRHQLDQHIVTIENAMA----PFSRFIRSRKAMVL 685
Query: 896 EIQDELSNVQEKIQTLQVEIQN 917
E + +LS++ +I ++ I N
Sbjct: 686 EEEQQLSHIASQISMMRDLISN 707
>gi|297624895|ref|YP_003706329.1| dynamin family protein [Truepera radiovictrix DSM 17093]
gi|297166075|gb|ADI15786.1| Dynamin family protein [Truepera radiovictrix DSM 17093]
Length = 621
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 172/635 (27%), Positives = 303/635 (47%), Gaps = 99/635 (15%)
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINA 383
+ + ER V+ + I ++ + E++ L A+ ++ F+LV+ GEYN+GKS+ +NA
Sbjct: 10 RDFLHRERLVIADLIALLGRLDAHKEDLQELRTALEDLEGLFMLVVCGEYNAGKSTFLNA 69
Query: 384 LLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICY--LPSPILKEMIIVD 441
LLG + + +GV PTT+ IT + + D A + ++ G +I P+PIL+E+ +VD
Sbjct: 70 LLGHKVMLEGVTPTTDRITIVTYGDRARDTEE-------GDFILRREFPAPILQELALVD 122
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKS 501
TPGTN ++Q+ Q LTE FVPRADLVLFV SADRP TESE FL + W KKVV V+NK
Sbjct: 123 TPGTNAVIQKHQELTERFVPRADLVLFVTSADRPFTESERRFLELIRSWGKKVVVVVNKF 182
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYP----VSARSTLEAKLSVSSAVGKDHSE 557
D+ + E E+ + FV+++ + L+ E++ + P V+A+S A+ + D +
Sbjct: 183 DILEPD-EREKVLEFVRDHAREALH-ESIEVAPQVFGVAAKSAFRARQA------GDEAA 234
Query: 558 LSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLL-----SSCET 612
L+ + L F++ + S G R++LKL +P+ +A R+ ++ E
Sbjct: 235 LAASGL-----------PALEDFIERTLSAGA-RVQLKLASPLGVAHRIAARYARTTQER 282
Query: 613 LVM-----KDCQDAKQDL-TLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVK 666
L + + Q+ + L +M + Y+ ++++ I R+ D T V+
Sbjct: 283 LALLADDRRTLQEVDRQLEQFKRDMYRGFESYLTQVKTVLIEVERRGDVFFDDT----VR 338
Query: 667 LIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSKN 726
L + N I ++ R +I A + ++ E W S N
Sbjct: 339 LRRILQLMDNERIREAFEAR----------------VIRGADKEIDGVVAEMVDWFISSN 382
Query: 727 AR---------EGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVI----EDF 773
+ RR ++ E R V + Q D L+R + + V+ +D
Sbjct: 383 LQVWEDMMNFVTTRR--QAGEERLIGEVGGRFQYDRDA--LIRGLSASAEEVLSSYNQDL 438
Query: 774 SASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLT-SVLPTTLEDLLALGLCSAG-GYIA 831
A + + + L GG+G + + L+ + L T + G+ AG G++
Sbjct: 439 EARRLANALQASAVQTGLIQVGGIGLGAAAVAFLSGAALDAT---GIVAGITMAGLGFLV 495
Query: 832 VANFPARRQRVI-----EKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDA 886
+ N R+RV E++ ++ DGLA + + +L+ L ++ PY
Sbjct: 496 LPN----RRRVAKRNLHEQMQRLRDGLAESLTAQFEAELRRATDKLSAAIS----PYTRF 547
Query: 887 AQLKLDRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
+ + DRL E+Q +L + +++ L+ E++ L +S
Sbjct: 548 VRSESDRLEELQGDLERAERELKALRREVETLDLS 582
>gi|330844581|ref|XP_003294199.1| hypothetical protein DICPUDRAFT_84689 [Dictyostelium purpureum]
gi|325075382|gb|EGC29277.1| hypothetical protein DICPUDRAFT_84689 [Dictyostelium purpureum]
Length = 693
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 157/637 (24%), Positives = 291/637 (45%), Gaps = 101/637 (15%)
Query: 345 SPLMEEVSLLIDAVSQI-DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF 403
SPL + +++ Q+ D FLLV+VGE+NSGKSS +NALLG YLK+G+ PTT+ I
Sbjct: 87 SPLSSSLGSFKESIEQLKDSSFLLVVVGEFNSGKSSFLNALLGNIYLKEGITPTTHRINI 146
Query: 404 LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA 463
+ F D + + I LP LK+ +VDTPGTN +++ Q +TE FVP++
Sbjct: 147 IEFGDKITSKTVPSRLSNTEHEIITLPVEWLKDFSLVDTPGTNAVIEGHQEITEHFVPKS 206
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN-------AFELEEAISF 516
DLVLFV S DR +ESE FL ++W KK+V V++K+DL N EL E I F
Sbjct: 207 DLVLFVTSIDRAFSESEKQFLEKVKKWGKKIVVVISKTDLIDNNPLSNNPQEELNEVIKF 266
Query: 517 VKENTMKLLNIENVTIYPVSARSTLEAKLSVS-------------------------SAV 551
V++N L + + I+P+S++ L+AKL +S ++V
Sbjct: 267 VEDNFKSQLGVSPI-IFPLSSKLALKAKLQLSGTSILNPNQQQSQSQQVNYNNLLSATSV 325
Query: 552 GKDHS--------ELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIA 603
++S EL+ N W+ + F LE + LD + ER++LKL P+ +A
Sbjct: 326 SNNYSKSTQKFYEELNQN-QQWKNSRFFDLENYILQTLDSN-----ERIKLKLLNPLGVA 379
Query: 604 ERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSR 663
++L + E D N+ ++ + E+ ++ + + +++ ++R
Sbjct: 380 DKLYNEFEEEFSSQRNVLDFDFENINQSLEQISEHQKDLQRDLDYHLERIDTILLRMENR 439
Query: 664 VVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQ 723
++ +Q SN +F K A+ ++ + +I + + L+ + +
Sbjct: 440 ANAFLDDEIQFSN-------IFNILKGDAIK--NQFEKKVIDGTNQEIETLVRDLVDIVV 490
Query: 724 SKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELV-------RKVDGYSS---RVIEDF 773
KN + RW ++ L Q + + V R +S+ + I+D
Sbjct: 491 DKNMK-----------RWKVIMDLINQKSSNKSQKVIGVIKNTRDTSDFSTNRQKTIQDM 539
Query: 774 S---------------ASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDL 818
+++ SK + I + L G +G A ++L TTL D+
Sbjct: 540 GSRTAKALSSYDKENESTNVSKDIKNAIYQTILFEAGTVGVA--------TILSTTLLDI 591
Query: 819 LALGLCSAGGYIAVANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTK 878
+ A +A P ++ ++ +N L ++++ + + + + + +
Sbjct: 592 TGILGFGALAVTGLAWVPFKKVQLKRSINSKISNLRVQLKDTISDRIGDEIRGGTDKIQD 651
Query: 879 VGKPYQDAAQLKLDRLSEIQDELSNVQEKIQTLQVEI 915
+PY D Q + +++++ ++++ +++ Q+L E+
Sbjct: 652 GIQPYVDFTQSESKKITDMTNKINEFKKERQSLVYEV 688
>gi|297565868|ref|YP_003684840.1| dynamin family protein [Meiothermus silvanus DSM 9946]
gi|296850317|gb|ADH63332.1| Dynamin family protein [Meiothermus silvanus DSM 9946]
Length = 546
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 181/321 (56%), Gaps = 33/321 (10%)
Query: 357 AVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQR 416
A++ ++ PF+LV+ GE+NSGKSS++NALLG LK+GV PTT+ I + + + A E Q
Sbjct: 37 ALADLEGPFMLVVSGEFNSGKSSILNALLGAELLKEGVTPTTDRINLITYGEQAKLEPQ- 95
Query: 417 CERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPL 476
PD I YLP +LK++ +VDTPGTN IL+ Q LTE F+PRADL+LFV SADRP
Sbjct: 96 ---GPDLTLI-YLPHALLKDLRMVDTPGTNAILEHHQVLTERFLPRADLILFVTSADRPF 151
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
T+SE FL+ + W KK+V ++NK DL + E E + +V+++ ++ L ++V + +S
Sbjct: 152 TQSEAEFLQLIKAWGKKIVLLVNKIDLL-SPSEQREVLEYVRQSALQTLG-QSVPVLGLS 209
Query: 537 ARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKL 596
AR + + K S L+ ++H R K+L E ++KL
Sbjct: 210 ARRAKQGE--------KQGSGLADLEAHIR--------KVL----------ANESAKIKL 243
Query: 597 ETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSL 656
+P+ + RL+ + ++ + ++ L +E+ LK ++ + + + L +
Sbjct: 244 GSPLGVLLRLVQDARPYLERELAENRKQLATCSELEALLKRHIERTQRDFDGQIALALQV 303
Query: 657 IDSTKSRVVKLIESTLQISNL 677
+D + R + ++ T+++S +
Sbjct: 304 LDEVRERGERWLDETVRLSRI 324
>gi|313680401|ref|YP_004058140.1| small GTP-binding protein [Oceanithermus profundus DSM 14977]
gi|313153116|gb|ADR36967.1| small GTP-binding protein [Oceanithermus profundus DSM 14977]
Length = 544
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 161/295 (54%), Gaps = 38/295 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
R +L E ++ + +A E + L A+ ++ PFLLV+ GE+NSGKSS++NALLG+ L
Sbjct: 14 RGLLAEGLEALAQAG---ETTTPLRQALQDLEGPFLLVVAGEFNSGKSSLLNALLGRELL 70
Query: 391 KDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQ 450
++GV PTT+ I ++ + EE P G + LP P+LK++ +VDTPGTN +++
Sbjct: 71 REGVTPTTDRIQWIAYG----EEPGSRALEP-GLVVLRLPHPLLKDVHLVDTPGTNAVIE 125
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
Q LTE F+PRADL+LF SADRP T SE FL + W KKVV V+NK DL E
Sbjct: 126 HHQILTERFLPRADLILFTTSADRPYTASERDFLELIRGWGKKVVLVVNKLDLL-GPDEA 184
Query: 511 EEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTF 570
EE +++V+E + L +E ++ VSAR + G+D
Sbjct: 185 EEVLAYVREQAARTLGVEP-PVFGVSAR---------RARAGED-------------GGV 221
Query: 571 DKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDL 625
+LE + L +E R+KL +P+ + ERLL E + + Q + +L
Sbjct: 222 KELEAFIERVLR------EEAARIKLGSPLGVLERLLEQGEGRLGPEAQALESEL 270
>gi|413945232|gb|AFW77881.1| hypothetical protein ZEAMMB73_815508, partial [Zea mays]
Length = 132
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 103/131 (78%)
Query: 791 LGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIAVANFPARRQRVIEKVNKIA 850
GTFGGLG AGLSASLLTSVL TTLEDLLAL LCSAGG+ +++FP RR+ I+K+NK A
Sbjct: 2 FGTFGGLGIAGLSASLLTSVLSTTLEDLLALALCSAGGFFVLSSFPGRRKHAIDKINKAA 61
Query: 851 DGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDELSNVQEKIQT 910
D L+R+++EA+QKD+ ++ +L FV + KPYQ+A Q K+D L +Q ELS V+ K+QT
Sbjct: 62 DELSRKVDEAIQKDISQSANNLIRFVEVISKPYQEACQRKIDWLQGVQGELSAVERKLQT 121
Query: 911 LQVEIQNLHVS 921
L+VEIQNL+ S
Sbjct: 122 LKVEIQNLNGS 132
>gi|94986205|ref|YP_605569.1| dynamin [Deinococcus geothermalis DSM 11300]
gi|94556486|gb|ABF46400.1| Dynamin-like GTPase [Deinococcus geothermalis DSM 11300]
Length = 564
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 176/358 (49%), Gaps = 35/358 (9%)
Query: 322 REKQLIETERSVL--LEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSS 379
R + L+ ER +L L+A + A P E + AV +DE FLLV+VGE+N+GKSS
Sbjct: 6 RVQDLLSRERVLLADLQAFLETQGAPP--EAIEHARQAVRSLDESFLLVVVGEFNAGKSS 63
Query: 380 VINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMII 439
+NALLG L +GV PTT+ I L D Q R P + Y P P L+ + +
Sbjct: 64 FVNALLGAAVLPEGVTPTTDRIYVLLHGDKPG--QLEPTRDPFVSRLTY-PLPSLEGVAL 120
Query: 440 VDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLN 499
VDTPGTN I+++ Q LTE F+PRADL+LF+ SADRP TESE FL +W + V+ V+N
Sbjct: 121 VDTPGTNAIIRQHQALTEGFLPRADLLLFLTSADRPFTESERQFLALAARWGRSVIMVVN 180
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS 559
K+DL + + E+ FV++ +L + ++ +SAR G D
Sbjct: 181 KADLLETPEQREQVREFVEKGARGVLGL-TPPVFLLSAR---------GEQRGGDPG--- 227
Query: 560 VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQ 619
F L L + L + ER RLKL +P+ A +L ET Q
Sbjct: 228 ----------FAALRDALRTRLSET-----ERTRLKLTSPLGTAAEILGGEETRAEAARQ 272
Query: 620 DAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNL 677
+DL + ++ + M E + L+ + R + I+STL+ NL
Sbjct: 273 TLTEDLAILRDLEAQRARHRETMLGELDGQLNRLGRLLSEFEVRADRFIDSTLRFGNL 330
>gi|325282375|ref|YP_004254916.1| Dynamin family protein [Deinococcus proteolyticus MRP]
gi|324314184|gb|ADY25299.1| Dynamin family protein [Deinococcus proteolyticus MRP]
Length = 585
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 194/385 (50%), Gaps = 48/385 (12%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
DR + L+ ER +L + ++ + E + A+S +DE FLLV+VGE+N+GKSS
Sbjct: 7 DRVQHLLTQERILLADVQALLSRCGAPEEAQAHARQALSALDETFLLVVVGEFNAGKSSF 66
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYL--PSPILKEMI 438
+NALLG L +GV PTT+ I L + A E Q + ++ L P P L+ +
Sbjct: 67 VNALLGTAALPEGVTPTTDRIYVLVNGERAGEMQPTAD-----PFVSRLTHPLPGLEGVA 121
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
+VDTPGTN I+++ Q LTE F+PRADLVLF+ SADRP TESE FL +W + VV V+
Sbjct: 122 LVDTPGTNAIIRQHQALTEGFLPRADLVLFLTSADRPFTESERQFLELAARWGRSVVMVV 181
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
NK+DL + A + E+ V++ +L + N ++ VSAR + G D
Sbjct: 182 NKADLLETAEQREQVREHVEKGARGVLGL-NPPVFLVSAR---------AEQRGGDAGFA 231
Query: 559 SVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDC 618
++ D+ R +L + ER RLKL+ P+ A LL ++
Sbjct: 232 ALRDALSR-----RLSE-------------TERTRLKLQGPLNTAAELLDGE----VRRT 269
Query: 619 QDAKQDLTLANEMIDSLKEYVMK----MESESISWRRKTLSLIDSTKSRVVKLIESTLQI 674
+ A++ L+ E++ L+ ++ M E + L+ + R + I+ L+
Sbjct: 270 RAARETLSADLEILRDLEAQRVRHGESMLGELDGQLNRVGRLLSEFEMRADRFIDQKLRF 329
Query: 675 SNLDIVAS-----YVFRGEKSAAMP 694
SN+ + + FR E A +P
Sbjct: 330 SNVRGLMNGRELEEQFRAEAVAELP 354
>gi|15806254|ref|NP_294959.1| hypothetical protein DR_1235 [Deinococcus radiodurans R1]
gi|6458975|gb|AAF10803.1|AE001971_3 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 592
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 187/381 (49%), Gaps = 44/381 (11%)
Query: 324 KQLIETERSVL--LEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVI 381
+ L+ ER +L L+A + A P E + A +DE FLLV+VGE+N+GKSS +
Sbjct: 26 QHLLSRERELLGDLQAFLESQGAPP--EVIEHARTATRMLDEAFLLVVVGEFNAGKSSFV 83
Query: 382 NALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYL--PSPILKEMII 439
NALLG + L +GV PTT+ I L D Q R P ++ L P P L+ + +
Sbjct: 84 NALLGAQVLPEGVTPTTDRIYVLVHGDTPG--QLEPTRDP---FVSRLTHPLPSLEGVAL 138
Query: 440 VDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLN 499
VDTPGTN I+++ Q LTE F+PRADLVLF+ SADRP TESE FL +W + V+ V+N
Sbjct: 139 VDTPGTNAIIRQHQALTEGFLPRADLVLFLTSADRPFTESERQFLALAARWGRSVIMVVN 198
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS 559
K+DL + + E+ +FV+ +L + N ++ VSAR G D +
Sbjct: 199 KADLLETPEQAEQVRAFVETGARGVLGL-NPPVFLVSAR---------REQRGGDAGFAA 248
Query: 560 VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQ 619
+ D + D S T ER RLKL +P+ A LL E
Sbjct: 249 LRD----------------ALRDRLSET--ERARLKLASPLGTAAELLGGEERRSAAARA 290
Query: 620 DAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDI 679
++DL + +++ + + M E + + L+ + R K I+ L+ NL
Sbjct: 291 TLQEDLGILHDLERQRERHRETMRGELDAQLGRVGRLLSEFEVRADKFIDDKLRFGNLRG 350
Query: 680 VASY-----VFRGEKSAAMPS 695
+ + FR E A +P+
Sbjct: 351 LMNSRDLEEQFRREAVAELPA 371
>gi|386813932|ref|ZP_10101156.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403429|dbj|GAB64037.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 581
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 135/224 (60%), Gaps = 18/224 (8%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSL------LIDAVSQIDEPFLLVIVGEYNSGKSSVINAL 384
R + E ++++ + E + +++ +Q++EPF L++ GEYNSGKSS INA+
Sbjct: 11 RDIFPEVVNLLDNSKKFFERIGASDMEKKVVEMRAQLNEPFYLLVAGEYNSGKSSFINAM 70
Query: 385 LGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPI--LKEMIIVDT 442
G+R L DG PTTN IT L + D + E G ++C P+ LK++ +VDT
Sbjct: 71 CGERVLTDGPTPTTNRITLLTYGD-------KVEIKEVGDHLCQATYPMESLKDVTLVDT 123
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ-QWKKKVVFVLNKS 501
PGTN I+ LTE FV RA+LVLFV SAD P TESE FL++ + +W +KV+F+LNK
Sbjct: 124 PGTNSIIIEHSALTESFVHRAELVLFVTSADHPFTESERQFLQFLKNKWGRKVLFILNKI 183
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
DL + EL E I+F+++N +LL E I VSAR AK+
Sbjct: 184 DL-KTPEELNEIINFLEKNCYRLLGFEP-KILAVSAREAYRAKV 225
>gi|281207265|gb|EFA81448.1| hypothetical protein PPL_05436 [Polysphondylium pallidum PN500]
Length = 556
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 157/284 (55%), Gaps = 35/284 (12%)
Query: 323 EKQLIETERSVLLEAI-DVIKKASPLMEEVSLLIDAVSQI-DEPFLLVIVGEYNSGKSSV 380
E+Q + S+LLE + + ++ S E + DA+ Q+ D FLLV+VGE+NSGKSS
Sbjct: 120 EQQALFDRNSLLLEQLQNDLQDFSAPEESRQQIRDAIEQLKDGLFLLVVVGEFNSGKSSF 179
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP---DGQYICYLPSPILKEM 437
+NALLG YLK+G+ PTT++I LR+ D + E P D Q I LP L+++
Sbjct: 180 LNALLGNTYLKEGITPTTSKINILRYGD-------KLEHQPGRNDEQEIVKLPVNWLRDI 232
Query: 438 IIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
+VDTPGTN +++ Q++TE F+PR+D+VLFV S DR +ESE VFL + W+KK+V +
Sbjct: 233 SLVDTPGTNAVVKGHQQITEHFIPRSDMVLFVTSVDRAFSESERVFLSNIRAWRKKIVVI 292
Query: 498 LNKSDLYQN------AFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAV 551
L+K+DL ++ A +L E + +E P + +T+ + + S V
Sbjct: 293 LSKADLIEHNPMSDAAADLAEVTKWRRE--------------PTYSWTTISSSATFSEVV 338
Query: 552 GKDHSELSVNDS---HWRINTFDKLEKLLYSFLDGSSSTGKERM 592
E+ N S W + K + + ++D SS+ E+
Sbjct: 339 SSTSHEIETNISALIDWIVEKNSKQWRAIMEYIDTRSSSRLEKF 382
>gi|320333237|ref|YP_004169948.1| dynamin family protein [Deinococcus maricopensis DSM 21211]
gi|319754526|gb|ADV66283.1| Dynamin family protein [Deinococcus maricopensis DSM 21211]
Length = 563
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 156/291 (53%), Gaps = 37/291 (12%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
DR L+ ER++L + ++ E V+ A++ +DE FLLV+VGE+N+GKSS
Sbjct: 5 DRVHDLLARERTLLSDIRAFLEAQGAPPEAVAHARTAITSLDEAFLLVVVGEFNAGKSSF 64
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPI--LKEMI 438
+NALL L +GV PTT+ I L + E Q R P ++ L +P+ L+ +
Sbjct: 65 VNALLRDAVLPEGVTPTTDRIYVLVHGETRGELQ--PTRDP---FVVRLTAPLPDLEGVA 119
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
+VDTPGTN I+++ Q LTE F+PRADLVLF+ SADRP TESE FL Q+W + VV V+
Sbjct: 120 LVDTPGTNAIIRQHQTLTEGFLPRADLVLFLTSADRPFTESERQFLTLAQRWGRSVVMVV 179
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
NK+DL + + E+ +FV+ +L++ +Y VSAR G D
Sbjct: 180 NKADLLETPEQREQVRAFVEAGARGVLDL-TPPVYLVSAR---------GEQRGGDAGFA 229
Query: 559 SVNDS-HWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLS 608
++ D+ R+ ER RLKL++P+ A LL+
Sbjct: 230 ALRDALRARLGEV-------------------ERTRLKLQSPLGTAAELLA 261
>gi|91200882|emb|CAJ73937.1| conserved hypopethical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 581
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 139/232 (59%), Gaps = 18/232 (7%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSL------LIDAVSQIDEPFLLVIVGEYNSGKSSVINAL 384
R + E ++++ + E + + + + SQ++EPF L++ GEYNSGKSS INAL
Sbjct: 11 RDIYPEIVNLLDNSKKFFERIGITEMEKRVEEMRSQLEEPFYLLVAGEYNSGKSSFINAL 70
Query: 385 LGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICY--LPSPILKEMIIVDT 442
G+R L DG PTTN IT L + D + E G ++C P +LK++ +VDT
Sbjct: 71 CGERVLVDGPTPTTNRITLLTYGD-------KVEVKEVGDHLCRATYPMEVLKDITLVDT 123
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ-QWKKKVVFVLNKS 501
PGTN I+ LTE FV RA+LVLF+ SAD P TESE FL++ + +W +KV+F+LNK
Sbjct: 124 PGTNSIILEHSALTEGFVHRAELVLFITSADHPFTESERQFLQFLKGKWGRKVLFILNKI 183
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGK 553
DL + EL + ISFV++N +LL E + VSA+ +A+ + A+ K
Sbjct: 184 DL-KTPKELIDIISFVEKNCYRLLGFEP-KVLSVSAKEAYKARSENNEALLK 233
>gi|386855442|ref|YP_006259619.1| Dynamin-like GTPase [Deinococcus gobiensis I-0]
gi|379998971|gb|AFD24161.1| Dynamin-like GTPase [Deinococcus gobiensis I-0]
Length = 566
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 177/358 (49%), Gaps = 39/358 (10%)
Query: 324 KQLIETERSVL--LEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVI 381
+ L+ ER++L L+A ++ A P E + +A+ +DE FLLV+VGE+N+GKSS +
Sbjct: 8 QALLTRERTLLSDLQAFLELQGAPP--EALVHAKEALRTLDETFLLVVVGEFNAGKSSFV 65
Query: 382 NALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE--RHPDGQYICYLPSPILKEMII 439
NALLG + L +GV PTT+ I L + E+ + E R P + Y P P L+ + +
Sbjct: 66 NALLGAQVLPEGVTPTTDRIYVL----VHGEQPGQLEPTRDPFVSRLTY-PLPSLEGVAL 120
Query: 440 VDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLN 499
VDTPGTN I++ Q LTE F+PRADLVLF+ S+DRP TESE FL +W + VV V+N
Sbjct: 121 VDTPGTNAIIREHQALTEGFLPRADLVLFLTSSDRPFTESERQFLGLAARWGRSVVMVVN 180
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS 559
K+DL + + + FV +L + N + VSAR G D
Sbjct: 181 KADLLETPEQAAQVKEFVMTGARGVLGL-NPPVALVSAR---------REQRGGDAG--- 227
Query: 560 VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQ 619
F L LL L + ER RLKL +P+ A LL E Q
Sbjct: 228 ----------FAALRALLKVRLSET-----ERTRLKLASPLGTAAELLGGEEARAGAARQ 272
Query: 620 DAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNL 677
+DL + ++ + + M E + L+ + R + ++ L+ SN+
Sbjct: 273 VLGEDLRVLRDLEQQREHHRGTMLGELDGQLNRVARLLSEFELRADRFVDEQLRFSNV 330
>gi|386359967|ref|YP_006058212.1| small GTP-binding protein domain-containing protein [Thermus
thermophilus JL-18]
gi|383508994|gb|AFH38426.1| small GTP-binding protein domain protein [Thermus thermophilus
JL-18]
Length = 535
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 195/397 (49%), Gaps = 53/397 (13%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
R++L E ++ + + +P+ + + L A+ ++ PFLLV+VGE+NSGKSS++NALLG+ L
Sbjct: 14 RALLAEGLEALAR-TPV--DPAPLRQALLDLEGPFLLVVVGEFNSGKSSLVNALLGEDLL 70
Query: 391 KDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQ 450
+G PTT+ I L + + EE + R P P+L+ + +VDTPGTN +L+
Sbjct: 71 PEGPTPTTDRIQLLEYGEEGREEGEGFLR-------LRKPHPLLRTLALVDTPGTNALLE 123
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
+ LT F+PRADL+LFV SADRPLT SE FLR + W KKVV V+NK+DL E
Sbjct: 124 HHEVLTRTFLPRADLILFVTSADRPLTRSEAEFLRLIRDWGKKVVLVVNKADLLSE--ED 181
Query: 511 EEAIS-FVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINT 569
EA++ +V E +L E V ++ VSAR E G+D L + D R+
Sbjct: 182 REAVARYVAEGARAVLG-EEVPLFLVSARRGKE---------GRDEGLLGLRDHVARVIA 231
Query: 570 FDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLAN 629
L LKL + + RLL E + + ++ Q L
Sbjct: 232 LKALP-------------------LKLSAALGVLRRLLVEGERALEAEAEEVGQALATCE 272
Query: 630 EMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNL-DIVASYVFRGE 688
+ D L+ +V ++ + + + R + ++ T+++ L D++ + FR
Sbjct: 273 ALEDLLRRHVARVRRDFAGQVALVERVFREVEERGHRFLDETVRLGRLPDLLNAKAFR-- 330
Query: 689 KSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSK 725
+++ A ++ +GE WL +
Sbjct: 331 --------ESFLKEVVQDAGARLERAVGEALRWLARR 359
>gi|429218723|ref|YP_007180367.1| small GTP-binding protein domain-containing protein [Deinococcus
peraridilitoris DSM 19664]
gi|429129586|gb|AFZ66601.1| small GTP-binding protein domain protein [Deinococcus
peraridilitoris DSM 19664]
Length = 563
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 248/567 (43%), Gaps = 53/567 (9%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
++ +DE FLLV+VGE+N+GKSS +NALLG L +GV PTT+ I L + E
Sbjct: 42 ITNLDESFLLVVVGEFNAGKSSFLNALLGSAVLPEGVTPTTDRIYVLTHGERGEPET--- 98
Query: 418 ERHPDGQYICYLPSPI--LKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
++ L P+ L+ + +VDTPGTN I+++ Q LTE F+PRADLVLF+ SADRP
Sbjct: 99 ---TSDPFVVRLRVPLEALEGVALVDTPGTNAIIRQHQTLTEGFLPRADLVLFLTSADRP 155
Query: 476 LTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPV 535
TESE FL ++W + V+ V+NK+DL + E+ FV+ +L + ++ V
Sbjct: 156 FTESERQFLDLARRWGRSVIMVVNKADLLETPETREQVRHFVEAGARGVLGLAP-PVFLV 214
Query: 536 SARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLK 595
SAR G D F L + L + ER RLK
Sbjct: 215 SAR---------GEQRGGDEG-------------FRAFRAALSARLSET-----ERTRLK 247
Query: 596 LETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLS 655
LE+P+ A +L E + +QDL ++ + + M E +
Sbjct: 248 LESPLAAAREILGGEERRAHAARETLRQDLETLRDLERQRERHRETMLGELDGQLNRVTR 307
Query: 656 LIDSTKSRVVKLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLL 715
++ ++R K I+ L+IS FR + +T +++ A+ D + +
Sbjct: 308 ILSEFEARADKFIDDHLRISR--------FR-----ELMNTRKLEERFREEAVRDLPEAI 354
Query: 716 GEYTMWLQSKNAREGRRYKESFEN----RWPSLVYLQPQVYPDMYELVRKVDGYSSRVIE 771
+ + + E ++ R P + + D L+ + G + R +E
Sbjct: 355 ERQFATMIDRFVEANLHFWEDVQSFLIRRAPQQEVARTRFSYDRAALLEGIAGSAQRHLE 414
Query: 772 DFSASSTSKMFEQEIREVFLGTFGGLGAAGLSASLLTSVLPTTLEDLLALGLCSAGGYIA 831
D + ++ Q + G G G ++ +V T D + A G I
Sbjct: 415 DVTQQQLARELSQGAEDAMRGVLGAGGLGIGIGAVTMAVASTAFVDFTGVLAGLAIGGIG 474
Query: 832 VANFPARRQRVIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKL 891
+ PA+R + + ++ + +EE ++++ + + +PY +L+
Sbjct: 475 LFVLPAKRLQALRQLRTRVAQMREALEEIVRREYAREQERADARLADAMRPYTRFTELET 534
Query: 892 DRLSEIQDELSNVQEKIQTLQVEIQNL 918
RL+ ++ ++ +I+ L E++ L
Sbjct: 535 ARLAGAEERSVGLRAQIEALSGEVKAL 561
>gi|384431708|ref|YP_005641068.1| dynamin family protein [Thermus thermophilus SG0.5JP17-16]
gi|333967176|gb|AEG33941.1| Dynamin family protein [Thermus thermophilus SG0.5JP17-16]
Length = 535
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 195/397 (49%), Gaps = 53/397 (13%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
R++L E ++ + + +P+ + + L A+ ++ PFLLV+VGE+NSGKSS++NALLG+ L
Sbjct: 14 RALLAEGLEALAR-TPV--DPAPLRQALLDLEGPFLLVVVGEFNSGKSSLVNALLGEDLL 70
Query: 391 KDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQ 450
+G PTT+ I L + + EE + R P P+L+ + +VDTPGTN +L+
Sbjct: 71 PEGPTPTTDRIQLLEYGEEGREEGEGFLR-------LRKPHPLLRTLALVDTPGTNALLE 123
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
+ LT F+PRADL+LFV SADRPLT SE FLR + W KKVV V+NK+DL E
Sbjct: 124 HHEVLTRTFLPRADLILFVTSADRPLTRSEAEFLRLIRDWGKKVVLVVNKADLLSE--ED 181
Query: 511 EEAIS-FVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINT 569
EA++ +V E +L E V ++ VSAR E G+D L + D R+
Sbjct: 182 REAVARYVAEGARAVLG-EEVPLFLVSARRGKE---------GRDEGLLRLRDHVARVIA 231
Query: 570 FDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLAN 629
L LKL + + RLL E + + ++ Q L
Sbjct: 232 LKALP-------------------LKLSAALGVLRRLLVEGERALEAEAEEVGQALATCE 272
Query: 630 EMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNL-DIVASYVFRGE 688
+ D L+ +V ++ + + + R + ++ T+++ L D++ + FR
Sbjct: 273 ALEDLLRRHVARVRRDFAGQVALVERVFREVEERGHRFLDETVRLGRLPDLLNAKAFR-- 330
Query: 689 KSAAMPSTSRIQHDIIGPALLDTQKLLGEYTMWLQSK 725
+++ A ++ +GE WL +
Sbjct: 331 --------ESFLKEVVQDAGARLERAVGEALRWLARR 359
>gi|226356982|ref|YP_002786722.1| hypothetical protein Deide_19670 [Deinococcus deserti VCD115]
gi|226318972|gb|ACO46968.1| Conserved hypothetical protein; putative membrane protein
[Deinococcus deserti VCD115]
Length = 564
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 183/381 (48%), Gaps = 40/381 (10%)
Query: 321 DREKQLIETERSVL--LEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
DR + L+ ER +L ++A + A P E + A +DE FLLV+VGE+N+GKS
Sbjct: 5 DRVQDLLSRERVLLSDVQAFLEVHGAPP--EALEHARTAARALDETFLLVVVGEFNAGKS 62
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMI 438
S +NALLG + L +GV PTT+ I L + Q R P + Y P P L+ +
Sbjct: 63 SFVNALLGAQVLPEGVTPTTDRIYVLVHGEQPG--QMEPTRDPFVSRLTY-PLPSLEGVA 119
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
+VDTPGTN I+++ Q LTE F+PRADLVLF+ SADRP TESE FL +W ++V+ V+
Sbjct: 120 LVDTPGTNAIIRQHQALTEGFLPRADLVLFLTSADRPFTESERQFLSLAARWGRQVIMVV 179
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSEL 558
NK+DL + + + FV+ +L + + +SAR G D
Sbjct: 180 NKADLLETTEQKSQVREFVENGARGVLGL-TPPVLLISAR---------GEQRGGDPG-- 227
Query: 559 SVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDC 618
F L ++L L + ER RLKL P+ LLS E
Sbjct: 228 -----------FLALREILKMRLSET-----ERTRLKLANPLATTGELLSGEEARADAAR 271
Query: 619 QDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNL- 677
+ +DL + ++ + + M E + L+ + R + I+ L+ SNL
Sbjct: 272 RTLTEDLGVLRDLEAQREHHRETMLGELDGQLNRIGRLLSEFEVRADRFIDDKLRFSNLR 331
Query: 678 DIVASYV----FRGEKSAAMP 694
++ S V FR E +P
Sbjct: 332 GLINSRVIEDEFRREAVGDLP 352
>gi|55981491|ref|YP_144788.1| GTP-binding protein [Thermus thermophilus HB8]
gi|55772904|dbj|BAD71345.1| probable GTP-binding protein [Thermus thermophilus HB8]
Length = 535
Score = 152 bits (384), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 180/374 (48%), Gaps = 50/374 (13%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEE 413
L A+ ++ PFLLV+VGE+NSGKSS++NALLG+ L +G PTT+ I L + + EE
Sbjct: 34 LRQALLDLEGPFLLVVVGEFNSGKSSLVNALLGEDLLPEGPTPTTDRIQLLEYGEEGREE 93
Query: 414 QQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISAD 473
+ R P P+L+ + +VDTPGTN +L+ + LT F+PRADL+LFV SAD
Sbjct: 94 GEGFLR-------LRKPHPLLRTLALVDTPGTNALLEHHEVLTRTFLPRADLILFVTSAD 146
Query: 474 RPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS-FVKENTMKLLNIENVTI 532
RPLT SE FLR + W KKVV V+NK+DL E EA++ +V E +L E V +
Sbjct: 147 RPLTRSEAEFLRLIRDWGKKVVLVVNKADLLSE--EDREAVARYVAEGARAVLG-EEVPL 203
Query: 533 YPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERM 592
+ VSAR E G+D L + D + L
Sbjct: 204 FLVSARRGKE---------GRDEGLLRLRDHVAEVIAMKALP------------------ 236
Query: 593 RLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRK 652
LKL + + RLL E + + ++ Q L + D L+ +V ++ +
Sbjct: 237 -LKLSAALGVLRRLLVEGEGALEAEAEEVGQALATCEALEDLLRRHVARVRRDFAGQVAL 295
Query: 653 TLSLIDSTKSRVVKLIESTLQISNL-DIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDT 711
+ + R + ++ T+++ L D++ + FR +++ A
Sbjct: 296 VERVFREVEERGHRFLDETVRLGRLPDLLNAKAFR----------ESFLKEVVQDAGARL 345
Query: 712 QKLLGEYTMWLQSK 725
++ +GE WL +
Sbjct: 346 ERAVGEALRWLARR 359
>gi|46199460|ref|YP_005127.1| GTPase [Thermus thermophilus HB27]
gi|46197086|gb|AAS81500.1| predicted GTPase [Thermus thermophilus HB27]
Length = 535
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 180/374 (48%), Gaps = 50/374 (13%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEE 413
L A+ ++ PFLLV+VGE+NSGKSS++NALLG+ L +G PTT+ I L + + EE
Sbjct: 34 LRQALLDLEGPFLLVVVGEFNSGKSSLVNALLGEDLLPEGPTPTTDRIQLLEYGEEGREE 93
Query: 414 QQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISAD 473
+ R P P+L+ + +VDTPGTN +L+ + LT F+PRADL+LFV SAD
Sbjct: 94 GEGFLR-------LRKPHPLLRTLALVDTPGTNALLEHHEVLTRTFLPRADLILFVTSAD 146
Query: 474 RPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS-FVKENTMKLLNIENVTI 532
RPLT SE FLR + W KKVV V+NK+DL E EA++ +V E +L E V +
Sbjct: 147 RPLTRSEAEFLRLIRDWGKKVVLVVNKADLLSE--EDREAVARYVAEGARAVLG-EEVPL 203
Query: 533 YPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERM 592
+ VSAR E G+D L + D + L
Sbjct: 204 FLVSARRGKE---------GRDEGLLRLRDHVAEVIAMKALP------------------ 236
Query: 593 RLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRK 652
LKL + + RLL E + + ++ Q L + D L+ +V ++ +
Sbjct: 237 -LKLSAALGVLRRLLVEGEGALEAEAEEVGQALATCEALEDLLRRHVARVRRDFAGQVAL 295
Query: 653 TLSLIDSTKSRVVKLIESTLQISNL-DIVASYVFRGEKSAAMPSTSRIQHDIIGPALLDT 711
+ + R + ++ T+++ L D++ + FR +++ A
Sbjct: 296 VERVFREVEERGHRFLDETVRLGRLPDLLNAKAFR----------ESFLKEVVQDAGARL 345
Query: 712 QKLLGEYTMWLQSK 725
++ +GE WL +
Sbjct: 346 ERAVGEALRWLARR 359
>gi|397567847|gb|EJK45816.1| hypothetical protein THAOC_35550, partial [Thalassiosira oceanica]
Length = 646
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 176/369 (47%), Gaps = 47/369 (12%)
Query: 304 SNSFFGKERVAGFVKFEDRE-----KQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAV 358
S+S ++G E R+ +L R + E V K L+ +++ L D
Sbjct: 29 SSSGAAASGLSGLFTKEQRDTLGEVHELASRTRKLAREIGRVAIKEESLLTDIARLKDDE 88
Query: 359 SQIDEP--FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE---- 412
S P F +V+ GE+N GKS+++NALLG L GV+PTT++IT + D E
Sbjct: 89 SSSPPPSLFTVVLCGEFNGGKSTLVNALLGVELLDSGVLPTTDKITIVLADDDGQENGSI 148
Query: 413 ---EQQRCERHPDGQYICYLPS---PILKEMIIVDTPGTNVILQRQQRLTE-EFVPRADL 465
+ ++ + +C LPS P+L+++ +VDTPG+N L + T + + ADL
Sbjct: 149 SGVDSRKKIVDSATKRLCLLPSSNYPLLEDLAVVDTPGSNACLSLEHTSTTLKILHDADL 208
Query: 466 VLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ------NAFELEEAI-SFVK 518
+LFV SADRP ESE L + ++K+V V+NK D+ + + E ++ + +V
Sbjct: 209 ILFVTSADRPFGESEKEILASIKSYRKRVALVINKMDILERQQGECHGDESKQQVEDYVV 268
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLY 578
E+ + L V I PVSAR L KL + G S R++ + L
Sbjct: 269 EHASEYLGARPVVI-PVSARDALSFKLLGGGSCGNPFSN--------RVSLSETL----- 314
Query: 579 SFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEY 638
T K +++ KL P+ ++E +L C +++ +D + D+ + +L +
Sbjct: 315 --------TAKAKIKTKLLNPLGVSEGILKECRGELLRRAEDLEIDVITLKLLTGNLDMW 366
Query: 639 VMKMESESI 647
++E+ I
Sbjct: 367 QKEIETAVI 375
>gi|332712253|ref|ZP_08432181.1| uncharacterized GTPase [Moorea producens 3L]
gi|332349059|gb|EGJ28671.1| uncharacterized GTPase [Moorea producens 3L]
Length = 570
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 91/143 (63%), Gaps = 6/143 (4%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP 421
+EPFLLVIVGE +GKSS INA++ ++ + V P T+ I + +S EEQ E P
Sbjct: 48 NEPFLLVIVGEVKAGKSSFINAIIQEKICQTDVEPCTDVIQKIVYS----EEQFEKEISP 103
Query: 422 DGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
+ I LP ILK + IVDTPGTN IL+ Q +TE ++P +DLV FV A P ++
Sbjct: 104 TLRKIG-LPIDILKTLSIVDTPGTNTILENHQEITENYIPNSDLVFFVFFAKNPYHKTAW 162
Query: 482 VFLRY-TQQWKKKVVFVLNKSDL 503
L Y ++QW+KKVVF+L +SDL
Sbjct: 163 ELLDYVSEQWRKKVVFILQQSDL 185
>gi|312135925|ref|YP_004003263.1| dynamin family protein [Caldicellulosiruptor owensensis OL]
gi|311775976|gb|ADQ05463.1| Dynamin family protein [Caldicellulosiruptor owensensis OL]
Length = 589
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 37/261 (14%)
Query: 341 IKKASPLMEEVSLLIDAVS------QIDEP-----FLLVIVGEYNSGKSSVINALLGKRY 389
IKK + ++E+S ID+ S I+E F LV++G++ GKS++IN +LG
Sbjct: 13 IKKYTSRVKEISDKIDSESIKKLAKSIEEKIEKDAFYLVVLGQFKRGKSTLINYMLGTDL 72
Query: 390 LKDGVVPTTNEITFLRFSD----------------LASEEQQRCER--HPDGQY------ 425
L GV+P T+ IT + +S L+ + C +P+ Q
Sbjct: 73 LPTGVLPLTSTITKIYYSPEVKVDVIFKNGMKKEILSQDLYLYCTEKGNPENQKGVDTIE 132
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
I Y + K+++IVDTPG + Q +T EFV RAD V+FV+S D P+TE E FL+
Sbjct: 133 IGYPFDFLNKDVVIVDTPGIGSVYQHNTDVTYEFVDRADAVIFVLSVDPPITEVEKKFLQ 192
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
+ K+ FV+NK DL ELEE I F + ++ I+PVSA+ LE +L
Sbjct: 193 RISESVDKIFFVINKCDL-TGKNELEEIIRFTINVIKDITKKASINIFPVSAKMALEGRL 251
Query: 546 SVSSAVGKDHSELSVNDSHWR 566
S S + K S++ V + H R
Sbjct: 252 SNSKDILK-KSDIKVFEEHLR 271
>gi|224062531|ref|XP_002300848.1| predicted protein [Populus trichocarpa]
gi|222842574|gb|EEE80121.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 71/80 (88%)
Query: 842 VIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKLDRLSEIQDEL 901
++++VN+IADGLA E+EEAMQKDL ETVG+LENFV +GKPYQDAAQ +L +L ++Q+EL
Sbjct: 1 MVDQVNRIADGLAGEVEEAMQKDLMETVGNLENFVKTIGKPYQDAAQKRLGKLLDLQEEL 60
Query: 902 SNVQEKIQTLQVEIQNLHVS 921
SNV +K +TL++EIQN+HVS
Sbjct: 61 SNVDKKHRTLRIEIQNVHVS 80
>gi|303249351|ref|ZP_07335580.1| GTP-binding protein HSR1-related protein [Desulfovibrio
fructosovorans JJ]
gi|302489252|gb|EFL49213.1| GTP-binding protein HSR1-related protein [Desulfovibrio
fructosovorans JJ]
Length = 569
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 37/270 (13%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
+ + EPFL V+VGE +GKSS+INALLG + P T+ I + + SE
Sbjct: 44 AAHVTEPFLFVVVGEVKTGKSSLINALLGASVTQVAPDPCTDRIRIITRGEHPSE----- 98
Query: 418 ERHPDGQYICY--LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
DG + L +PIL + IVDTPG + I+ R Q +TEEF+PRADLVLFV SA P
Sbjct: 99 --AADGPLLTRVSLDNPILDGLAIVDTPGVDSIIDRHQEITEEFIPRADLVLFVFSALNP 156
Query: 476 LTESEVVFLRYTQQ-WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLN------IE 528
+ S F W++ V F L ++DL ++ NT +L + +
Sbjct: 157 YSRSAWEFYDLAADTWRRNVAFALTQADLASP--------EQIEVNTARLRDLARDRGVA 208
Query: 529 NVTIYPVSA-RSTLEAKLSVSSAVGKDHSELSVNDSHWRI------NTFDKLEKLLYSFL 581
+ TI+ VSA S + + +A+ + EL+ + H+ + ++L L L
Sbjct: 209 DPTIFLVSAVTSETDPEAGGIAALRRLVRELTASGGHFAAKLEATRRSAERLATELGRSL 268
Query: 582 DG------SSSTGKERMRLKLETPIRIAER 605
+G + + +RMR +L+T + A+R
Sbjct: 269 EGVAAELAADTAEADRMRKRLQTARQAADR 298
>gi|312794410|ref|YP_004027333.1| dynamin family protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181550|gb|ADQ41720.1| Dynamin family protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 589
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 25/213 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--------------- 407
+ F LV++G++ GKS++IN +LG L GV+P T+ IT + +S
Sbjct: 46 DAFYLVVLGQFKRGKSTLINYMLGTNLLPTGVLPLTSSITKIYYSPEIKIDVIFYNGVKK 105
Query: 408 -------DLASEEQQ--RCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
+L E+ + ++ D I Y + K+++IVDTPG I Q +T E
Sbjct: 106 EIPVDELELYCTEKGNPKNQKGVDTIEIGYPFDFLNKDVVIVDTPGIGSIYQHNTDVTYE 165
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
FV +AD V+FV+S D P+TE E FL + K+ FV+NK DL N ELEE +SF K
Sbjct: 166 FVDKADAVIFVLSVDPPITEVEKRFLLKIAESVDKIFFVINKCDL-TNRNELEEIVSFTK 224
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAV 551
+ EN+ I+P+SA+ LE K+ S V
Sbjct: 225 SVIRDITKKENINIFPLSAKMALEGKVLNSREV 257
>gi|392399501|ref|YP_006436102.1| GTPase [Flexibacter litoralis DSM 6794]
gi|390530579|gb|AFM06309.1| putative GTPase [Flexibacter litoralis DSM 6794]
Length = 574
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 10/196 (5%)
Query: 360 QIDEPFLLVIVGEYNSGKSSVINALLG--KRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
+I+EP++ V+VGE +GKSS +NALL K K P T+ + + L EE+Q
Sbjct: 46 RINEPYMFVVVGEVKAGKSSFVNALLETEKDICKVAPDPCTDTVQQI----LYGEEEQIM 101
Query: 418 ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLT 477
+P + I LP ILKE+ IVDTPGTN I + Q++TE+F+P +DL++FV A P
Sbjct: 102 VMNPHLKKIL-LPVEILKEIAIVDTPGTNAISEGHQKITEDFIPSSDLIVFVFEAKNPYR 160
Query: 478 ESEVVFLRYTQQ-WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
+S F + + W+KK++FVL +SDL N +L I V+++ K +E I+ VS
Sbjct: 161 QSSWDFFDFIHKDWRKKIIFVLQQSDLL-NESDLNTNIEGVRKHAEKKGLLE-PQIFAVS 218
Query: 537 ARSTLEAKLSVSSAVG 552
A+ E S G
Sbjct: 219 AKLEKEGNHEESHFAG 234
>gi|374299492|ref|YP_005051131.1| GTP-binding protein HSR1-like protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332552428|gb|EGJ49472.1| GTP-binding protein HSR1-related protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 579
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 10/189 (5%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
V ++ PFL V+VGE +GKSS INALLG+ P T+ I + + +R
Sbjct: 44 VRSVNAPFLFVVVGEVKAGKSSFINALLGEDICAVAPDPCTDVIQKIVHA------PRRS 97
Query: 418 ERHPDGQYI-CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPL 476
ER Q LP+ IL+E+ IVDTPGTN I++R Q +TE F+P ADL +FV A P
Sbjct: 98 ERIVSDQVREVGLPNDILREVAIVDTPGTNSIIERHQEITERFIPEADLAIFVFPAVNPY 157
Query: 477 TESEVVFLRYTQQ-WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPV 535
S R W KK++FVL ++D A EL+ ++ V E + + + I+PV
Sbjct: 158 ARSAWELFRLVHSDWHKKIIFVLQQADRASPA-ELKVNLARVAEYARE-RGVNSPRIFPV 215
Query: 536 SARSTLEAK 544
SA+ E K
Sbjct: 216 SAKLASEGK 224
>gi|386392877|ref|ZP_10077658.1| putative GTPase [Desulfovibrio sp. U5L]
gi|385733755|gb|EIG53953.1| putative GTPase [Desulfovibrio sp. U5L]
Length = 583
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
++ + EPFL V+VGE +GKSS+INALLG P T+ I + + A
Sbjct: 44 LAHVSEPFLFVVVGEVKTGKSSLINALLGAPVTDVAPDPCTDRIHIISRGEAAGAP---- 99
Query: 418 ERHPDGQYICY--LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
P+G + + L +P+L + IVDTPG + I+ R Q +TEEF+PRADLVLFV SA P
Sbjct: 100 ---PEGPLVRHVALDNPLLDGLAIVDTPGVDSIIDRHQEITEEFIPRADLVLFVFSALNP 156
Query: 476 LTESEVVFLR-YTQQWKKKVVFVLNKSDL 503
+ S F W++ V F L ++DL
Sbjct: 157 YSRSAWDFFDLMATTWRRNVAFALTQADL 185
>gi|357632548|ref|ZP_09130426.1| hypothetical protein DFW101_0418 [Desulfovibrio sp. FW1012B]
gi|357581102|gb|EHJ46435.1| hypothetical protein DFW101_0418 [Desulfovibrio sp. FW1012B]
Length = 583
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
++ + EPFL V+VGE +GKSS+INALLG P T+ I + + A
Sbjct: 44 LAHVSEPFLFVVVGEVKTGKSSLINALLGAPVTDVAPDPCTDRIHIISRGEAAGAP---- 99
Query: 418 ERHPDGQYICY--LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
P+G + + L +P+L + IVDTPG + I+ R Q +TEEF+PRADLVLFV SA P
Sbjct: 100 ---PEGPLVRHVALDNPLLDGLAIVDTPGVDSIIDRHQEITEEFIPRADLVLFVFSALNP 156
Query: 476 LTESEVVFLR-YTQQWKKKVVFVLNKSDL 503
+ S F W++ V F L ++DL
Sbjct: 157 YSRSAWDFFDLMATTWRRNVAFALTQADL 185
>gi|344995506|ref|YP_004797849.1| dynamin family protein [Caldicellulosiruptor lactoaceticus 6A]
gi|343963725|gb|AEM72872.1| Dynamin family protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 589
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 25/207 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--------------- 407
+ F LV++G+ GKS++IN +LG L GV+P T+ IT + +S
Sbjct: 46 DAFYLVVLGQLKRGKSTLINYMLGTNLLPTGVLPLTSSITKIYYSPEIKIDVIFYNGVKK 105
Query: 408 -------DLASEEQQ--RCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
+L E+ + ++ D I Y + K+++IVDTPG I Q +T E
Sbjct: 106 EIPVDELELYCTEKGNPKNQKGVDTIEIGYPFDFLNKDVVIVDTPGIGSIYQHNTDVTYE 165
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
FV +AD V+FV+S D P+TE E FL + K+ FV+NK DL N ELEE +SF K
Sbjct: 166 FVDKADAVIFVLSVDPPITEVEKRFLLKIAESVDKIFFVINKCDLI-NRNELEEIVSFTK 224
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKL 545
+ EN+ I+P+SA+ LE K+
Sbjct: 225 SVIRDITKKENINIFPLSAKMALEGKV 251
>gi|222530222|ref|YP_002574104.1| dynamin family protein [Caldicellulosiruptor bescii DSM 6725]
gi|222457069|gb|ACM61331.1| Dynamin family protein [Caldicellulosiruptor bescii DSM 6725]
Length = 444
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 147/309 (47%), Gaps = 44/309 (14%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-----DLASEEQQRC 417
+ F LV++G++ GKS++IN +LG L GV+P T+ IT + +S D+ +
Sbjct: 46 DAFYLVVLGQFKRGKSTLINYMLGTNLLPTGVLPLTSSITKIYYSPEVKIDVIFNNGVKK 105
Query: 418 E-------------RHPDGQY------ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
E R+P Q I Y + ++++IVDTPG I Q +T E
Sbjct: 106 EIPVDKLELYCTEKRNPKNQKGVDTIEIGYPFDFLNRDVVIVDTPGIGSIYQHNTDVTYE 165
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
F+ ++D V+FV+S D P+TE E FL + K+ FV+NK DL N ELEE ++F K
Sbjct: 166 FIDKSDAVIFVLSVDPPITEVEKQFLLKIAESVDKIFFVINKCDL-TNRNELEEIVTFTK 224
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLY 578
+ EN+ I+P+SA+ LE K+ +D E+ + S I E+ L
Sbjct: 225 NVIRDITKKENINIFPLSAKMALEGKV-------QDRREV-IKKSGIEI-----FEEELK 271
Query: 579 SFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEY 638
FL E+ +++ + ++ + L C T + D + L E I+ E+
Sbjct: 272 RFLRN------EKEKVQFLSNLKSLDSFLEVCRTFLESDMKLKVMPLKQLEENIEKFDEF 325
Query: 639 VMKMESESI 647
+ K+ I
Sbjct: 326 LDKINRNKI 334
>gi|392939316|ref|ZP_10304960.1| LOW QUALITY PROTEIN: dynamin family protein [Thermoanaerobacter
siderophilus SR4]
gi|392291066|gb|EIV99509.1| LOW QUALITY PROTEIN: dynamin family protein [Thermoanaerobacter
siderophilus SR4]
Length = 580
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 49/287 (17%)
Query: 356 DAVSQI-----DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--- 407
+AVS++ + F LVI+G++ GKS+ N +LG L GVVP T+ IT +++S
Sbjct: 26 EAVSEVKNKFCNNIFYLVILGQFKRGKSTFTNYMLGADILPTGVVPLTSVITKIQYSTDI 85
Query: 408 -------------------DLASEEQQRCERHPDGQ--YICYLPSPILKEMIIVDTPGTN 446
DL E+ + + +I Y I +++I+DTPG
Sbjct: 86 WAKVLYDDGRSENIDIKELDLYCTEKNNPKNIKGVKEIHIGYPFEFISNDVVIIDTPGIG 145
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+ + + ++ +AD V+F++S D P++E E FL + K+ FVLNK D Y N
Sbjct: 146 SVYKHNTDVAYSYINKADAVIFLLSVDPPISELEKEFLSKISENVNKIFFVLNKID-YVN 204
Query: 507 AFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWR 566
EL+E I+F + ++ N++IYP+SA+ LE K+S KD+ + + +
Sbjct: 205 EMELKEIINFNENIVREITKNNNISIYPISAKLALEGKIS------KDNKAIEKSGTQ-- 256
Query: 567 INTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETL 613
KLE L +FL KE+ ++ LE+ + ER++S C+T
Sbjct: 257 -----KLENDLQNFL------IKEKEKVLLESYAKNIERIISMCQTF 292
>gi|732233|sp|P40983.1|YOR6_CALSR RecName: Full=Uncharacterized protein in xynA 3'region; AltName:
Full=ORF6
gi|552047|gb|AAB42046.1| ORF6, partial [Caldicellulosiruptor sp. Rt8B.4]
Length = 402
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 50/314 (15%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F LV++G++ GKS++IN +LG L GV+P T+ IT + +S
Sbjct: 48 FYLVVLGQFKRGKSTLINYMLGANLLPTGVLPLTSVITKIYYSPEVKVDVIFESGVKKEI 107
Query: 408 -----DLASEEQ-----QRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTE 457
DL E+ Q+C D I Y + K+++IVDTPG + Q +T
Sbjct: 108 PVDELDLYCTERGNPKNQKC---VDTIEIGYPFDFLNKDVVIVDTPGIGSVYQHNTDVTY 164
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
EF+ ++D V+FV+S D P+TE E FL + K+ FV+NKSDL E+EE +SF
Sbjct: 165 EFIDKSDAVVFVLSVDPPITEVEKQFLLKIAENVDKIFFVINKSDLTSKN-EIEEIVSFT 223
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL 577
+ N+ I+P+SA+ LE K+S +E + S I EK L
Sbjct: 224 TNVIKDITKKGNINIFPLSAKMALEGKIS--------KNEEMIEKSCVEI-----FEKEL 270
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKE 637
FL +E+ ++++ + ++ + L CE + D + + E I+ E
Sbjct: 271 KQFL------KEEKGKIQILSNLKSLDGFLGVCEAFLENDMKLKIMPVKQLEENIEKFNE 324
Query: 638 YVMKMESESISWRR 651
++ ++ I +
Sbjct: 325 FLERVNQNKIEIYK 338
>gi|147676955|ref|YP_001211170.1| hypothetical protein PTH_0620 [Pelotomaculum thermopropionicum SI]
gi|146273052|dbj|BAF58801.1| hypothetical protein PTH_0620 [Pelotomaculum thermopropionicum SI]
Length = 589
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 35/210 (16%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC------- 417
F LV++GE+ GK++ +NALLG L VVP T+ IT +R+ ++ +C
Sbjct: 47 FNLVVLGEFKRGKTTFLNALLGAEILPTAVVPLTSIITEIRYGEIL-----KCKVCFLHG 101
Query: 418 ----------------ERHPDGQYICYL-----PSPILKE-MIIVDTPGTNVILQRQQRL 455
E +P + L PSP LKE ++++DTPG + Q
Sbjct: 102 GTKEIELSEVAGYVTEEGNPGNEKKVKLVQLEYPSPYLKEGVVLIDTPGVGSVYQNNTHE 161
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
T ++P+ D +F++S+D+PL+++E FL+ +Q+ K FVLNK D ++ + ++A+
Sbjct: 162 TYNYLPKVDAAIFMLSSDQPLSQAECDFLKTIKQYSTKTFFVLNKIDYLEDK-DRQKALD 220
Query: 516 FVKENTMKLLNIENVTIYPVSARSTLEAKL 545
F ++ + ENV + P+SA+ LE KL
Sbjct: 221 FARKILKEKAGFENVDVIPLSAKMALEGKL 250
>gi|326391286|ref|ZP_08212827.1| Dynamin family protein [Thermoanaerobacter ethanolicus JW 200]
gi|325992681|gb|EGD51132.1| Dynamin family protein [Thermoanaerobacter ethanolicus JW 200]
Length = 587
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 49/287 (17%)
Query: 356 DAVSQI-----DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--- 407
+AVS++ + F LVI+G++ GKS+ N +LG L GVVP T+ IT +++S
Sbjct: 33 EAVSEVKNKFCNNIFYLVILGQFKRGKSTFTNYMLGADILPTGVVPLTSVITKIQYSPDI 92
Query: 408 -------------------DLASEEQQRCERHPDGQ--YICYLPSPILKEMIIVDTPGTN 446
DL E+ + + +I Y I +++I+DTPG
Sbjct: 93 WAKVLYDDGRSENIDIKELDLYCTEKNNPKNIKGVKEIHIGYPFEFISNDVVIIDTPGIG 152
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+ + + ++ +AD V+F++S D P++E E FL + K+ FVLNK D Y N
Sbjct: 153 SVYKHNTDVAYSYINKADAVIFLLSVDPPISELEREFLSKISENVNKIFFVLNKID-YVN 211
Query: 507 AFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWR 566
EL+E I+F + ++ N++IYP+SA+ LE K+S KD+ + + +
Sbjct: 212 EMELKEIINFNENIVREITKNNNISIYPISAKLALEGKIS------KDNKAIEKSGTQ-- 263
Query: 567 INTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETL 613
KLE L +FL KE+ ++ LE+ + ER++S C+T
Sbjct: 264 -----KLENDLQNFL------IKEKEKVLLESYAKNIERIISMCQTF 299
>gi|386826349|ref|ZP_10113456.1| dynamin family protein [Beggiatoa alba B18LD]
gi|386427233|gb|EIJ41061.1| dynamin family protein [Beggiatoa alba B18LD]
Length = 591
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 19/191 (9%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQI----DEPFLLVIVGEYNSG 376
D++ Q T+ + L+A+ I A E L D VS++ +PF+ V+VGE +G
Sbjct: 7 DQQLQYYRTDLATHLKALQDISIAVGNKE----LTDWVSELRMRTTDPFMFVVVGEVKAG 62
Query: 377 KSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI--CYLPSPIL 434
KSS INALL + K P T+ + + + + S H +++ LP IL
Sbjct: 63 KSSFINALLSRDICKVAPDPCTDTVQQIVYGEKES-------THVLNEHLKKITLPIDIL 115
Query: 435 KEMIIVDTPGT-NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT-QQWKK 492
KE+ IVDTPGT NV ++ Q +TE F+P +DL++FV P ES FL Y Q+W K
Sbjct: 116 KELAIVDTPGTNNVTIKEHQEITEHFIPHSDLIIFVFPCINPYQESAWKFLSYIHQEWHK 175
Query: 493 KVVFVLNKSDL 503
KV+F+L ++DL
Sbjct: 176 KVIFILQQADL 186
>gi|162448657|ref|YP_001611024.1| hypothetical protein sce0387 [Sorangium cellulosum So ce56]
gi|161159239|emb|CAN90544.1| hypothetical protein sce0387 [Sorangium cellulosum So ce56]
Length = 605
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 30/215 (13%)
Query: 356 DAVSQID-EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------ 408
D V ++D + F LV+VGE+N GK++ +NALLG L GV PTT I L ++
Sbjct: 38 DLVKKLDADRFHLVVVGEFNHGKTTFVNALLGASILPVGVTPTTAVIHHLEYAADPRAEV 97
Query: 409 -LASEEQQRC------------ERHPDGQYICYL----PSPILKE-MIIVDTPGTNVILQ 450
AS E+ ER + +L P+ +L+E +++VDTPG N +
Sbjct: 98 VYASGERTGLPFEDVRAFTVGGERSSSAGEVKFLEVGYPAELLRERVVLVDTPGVNDLSL 157
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLNKSDLYQNAF 508
++ +T ++PR+D VLF+I A +PL ESE VFL + Q + K++FV+ K D++
Sbjct: 158 QRADITYSYIPRSDAVLFLIDAGQPLKESERVFLQEKLLGQSRDKILFVVTKRDIWSQDE 217
Query: 509 ELEEAISFVKENTMKLLNIENVTIYPVSARSTLEA 543
E+ EA+++++ KL +++ ++P+S+ LE
Sbjct: 218 EV-EALAYIRSELGKL--VKSPVVFPISSERALEG 249
>gi|254422017|ref|ZP_05035735.1| GTPase, putative [Synechococcus sp. PCC 7335]
gi|196189506|gb|EDX84470.1| GTPase, putative [Synechococcus sp. PCC 7335]
Length = 587
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 20/279 (7%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKD-GVVPTTNEITFLRFSDLASEEQQRCER 419
I++PFL V++GE +GKSS INALL + + G P TN + + + A E E
Sbjct: 47 INQPFLFVVIGEVKAGKSSFINALLDSGEICEVGADPRTNMVAKIIY---AQGEGYSREV 103
Query: 420 HPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTES 479
HP P PIL+++ IVDTPGTN Q+ + +T+EF+P +DLV+FV + P T +
Sbjct: 104 HPGELREIGRPVPILQQIAIVDTPGTNSPSQKHEAITKEFIPNSDLVIFVFFSKNPYTNT 163
Query: 480 EVVFLRYT-QQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
+ + ++W+K V+FVL ++DL + EL+ ++ ++ + + I + ++ SA+
Sbjct: 164 AWTLVDFAHKEWRKPVIFVLQQADLADDR-ELQASVQYIAQEAQQ-RQIADPKVFATSAK 221
Query: 539 STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLET 598
+ KL + D SE +++ + F + S+ TG + RLKL +
Sbjct: 222 LATD-KLKSDHSNSDDSSE-NIDAGFAPVQDFIR-----------STITGGQGYRLKLTS 268
Query: 599 PIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKE 637
I AE+++ + Q QD T+ + D L +
Sbjct: 269 NIGAAEQIVERLGNDMRLIKQQLHQDETVVARIRDRLGQ 307
>gi|332668027|ref|YP_004450815.1| HSR1-like GTP-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332336841|gb|AEE53942.1| GTP-binding protein HSR1-related protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 578
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 8/151 (5%)
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALL--GKRYLKDGVVPTTNEITFLRFSDLASEE 413
D ++I++PF+ VIVGE +GKSS INALL + K P T+ I + + E+
Sbjct: 40 DLRNRINDPFMFVIVGEVKAGKSSFINALLQTDREITKVAPQPMTDTIQQIVYG----EK 95
Query: 414 QQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISAD 473
++ +P + I +P ILKE+ IVDTPGTN I++ Q +TE F+P +DL++FV A
Sbjct: 96 EEVIVINPFLKKIL-IPVDILKEVAIVDTPGTNTIIEHHQEITESFIPASDLIVFVFEAK 154
Query: 474 RPLTESEVVFLRYTQ-QWKKKVVFVLNKSDL 503
P +S F ++ W+KKV+FVL + DL
Sbjct: 155 NPYRQSAWDFFKFIHGDWRKKVIFVLQQKDL 185
>gi|332712235|ref|ZP_08432163.1| small GTP-binding protein domain protein [Moorea producens 3L]
gi|332349041|gb|EGJ28653.1| small GTP-binding protein domain protein [Moorea producens 3L]
Length = 526
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 127/272 (46%), Gaps = 68/272 (25%)
Query: 337 AIDVIKKASPLMEEVSLL-------IDAV-SQIDEPFLLVIVGEYNSGKSSVINALLGKR 388
+++ IK L E LL +DA+ Q++ PF + + GE+N+GKSSV+N L
Sbjct: 15 SLNTIKGVKLLFVEAELLFNVSCPDLDALKQQLENPFSIFVCGEFNAGKSSVLNRLSNDE 74
Query: 389 YLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI 448
G++PTTN I +P+G ++ +D+PGTN I
Sbjct: 75 LAAVGILPTTNSIQ---------------PYYPEG----------FDGIVFIDSPGTNSI 109
Query: 449 LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ-WKKKVVFVLNKSDLYQNA 507
++R Q LTE ++ AD++LFV S +RPLT+SE+ FL + W +KV+ ++NK DL
Sbjct: 110 IERHQELTENYLQHADIILFVTSVERPLTKSELDFLSLVSKIWVRKVIVIINKVDLVTPQ 169
Query: 508 FELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRI 567
E E+ IS VK+ + E ++ VS R+
Sbjct: 170 -ESEQIISHVKDGLHDVFT-EVPPLFTVSTRTG--------------------------- 200
Query: 568 NTFDKLEKLLYSFLDGSSSTGKERMRLKLETP 599
N D L L FL + E++RLKL+ P
Sbjct: 201 NDIDTLRDFLLEFLAET-----EKIRLKLQGP 227
>gi|302872643|ref|YP_003841279.1| dynamin family protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575502|gb|ADL43293.1| Dynamin family protein [Caldicellulosiruptor obsidiansis OB47]
Length = 589
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 36/248 (14%)
Query: 339 DVIKKASPLMEEVSLLIDAVS----------QIDEPFL-LVIVGEYNSGKSSVINALLGK 387
D+I+ + ++E+S ID+ S +I++ L LV++G++ GKS++IN +LG
Sbjct: 11 DMIRNFTEQVQEISNEIDSESIKKLAGNIKEKIEKDALYLVVLGQFKRGKSTLINYMLGA 70
Query: 388 RYLKDGVVPTTNEITFLRFS----------------------DLASEEQQ--RCERHPDG 423
L GV+P T+ IT + +S DL E+ + ++ D
Sbjct: 71 NLLPTGVLPLTSVITKIYYSPEVKVNVIFESGVKKEIPVDELDLYCTEKGNPKNQKGVDT 130
Query: 424 QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
I Y + K+++IVDTPG + Q +T +F+ R+D V+FV+S D P+TE E F
Sbjct: 131 IEIGYPFDFLNKDVVIVDTPGIGSVYQHNTDVTYKFIDRSDAVVFVLSVDPPITEIEKQF 190
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEA 543
L + K+ FV+NKSDL E+EE ++F + EN+ I+P+SA+ LE
Sbjct: 191 LLKIAENVHKIFFVINKSDLTSKN-EIEEIVNFTTNVIKDITKKENINIFPLSAKMALEG 249
Query: 544 KLSVSSAV 551
K+S + +
Sbjct: 250 KISKNEEI 257
>gi|262200026|ref|YP_003271235.1| dynamin family protein [Haliangium ochraceum DSM 14365]
gi|262083373|gb|ACY19342.1| Dynamin family protein [Haliangium ochraceum DSM 14365]
Length = 620
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 27/207 (13%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ-----QR 416
+E F LV++GE+N GKSS +NALLG L G+ PTT I + ++D E +R
Sbjct: 50 NERFYLVVLGEFNHGKSSFVNALLGADVLPTGITPTTATINHVVYADKPRAEAMLADGKR 109
Query: 417 CE---------------RHPDGQYI-CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEF 459
E R + Y+ PS IL+E I +VDTPG N + + + +T +
Sbjct: 110 TEFDAGAVADWVTVAGKRSKEVTYVEVGYPSEILRENITLVDTPGVNDLNEARAEITYGY 169
Query: 460 VPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
VPRAD V+F++ A + L +SE FL + +++++FVL KSDL A E +V
Sbjct: 170 VPRADAVIFLLDAGQALKDSEREFLASHVLEGSRERMIFVLGKSDLLSEA-ERASVTDYV 228
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
++ L + ++PVSAR LE +
Sbjct: 229 RKGLADL--VPEPALFPVSARHCLEGR 253
>gi|327398700|ref|YP_004339569.1| dynamin family protein [Hippea maritima DSM 10411]
gi|327181329|gb|AEA33510.1| Dynamin family protein [Hippea maritima DSM 10411]
Length = 577
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 25/218 (11%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
++E F LV++G++ GKS++INALLG + ++P T+ +T + +S
Sbjct: 31 LNEQFNLVVIGQFKRGKSTLINALLGDDIVPSSILPLTSIVTIISYSQAKKAIVKFLDNS 90
Query: 409 -----------LASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLT 456
+E+ + + + PSP LK+ I I+DTPG + + +
Sbjct: 91 KEEIELEKIEKYVTEKHNPKNKLNVKEVHVFHPSPYLKKGIRIIDTPGIGSVFKHNTDVA 150
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISF 516
F+P D +FV+S D PL E+E+ FL+ + + +K FVLNK D+ EL+E I F
Sbjct: 151 YSFLPYCDAAVFVMSPDPPLGEAEIGFLKNVRTYTEKFFFVLNKIDMVSEK-ELDEVIEF 209
Query: 517 VKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKD 554
K + + IYP+SA++ L+AK + S + K+
Sbjct: 210 NKHFLEDYTKTKGIKIYPISAKNALKAKQTKDSNLLKE 247
>gi|3850577|gb|AAC72117.1| This gene may be cut off [Arabidopsis thaliana]
Length = 160
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 833 ANFPARRQR-VIEKVNKIADGLAREIEEAMQKDLQETVGHLENFVTKVGKPYQDAAQLKL 891
++P R R +I KVNK+AD LA+++E+AMQKDL + +L NFV V KPY++ AQL+L
Sbjct: 65 CSWPLLRWRAIIGKVNKVADALAQQLEDAMQKDLSDATSNLVNFVNIVAKPYREEAQLRL 124
Query: 892 DRLSEIQDELSNVQEKIQTLQVEIQNLHVS 921
DRL IQ ELS+++ K+Q LQV+I NLHVS
Sbjct: 125 DRLLGIQKELSDIRSKLQLLQVDIDNLHVS 154
>gi|125552198|gb|EAY97907.1| hypothetical protein OsI_19823 [Oryza sativa Indica Group]
Length = 163
Score = 102 bits (253), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Query: 65 QQRPRTLYPGGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEAS 124
++ PRTL+PGG+KRPEI+VP +VL++ + LA GDA+ IVVL GE
Sbjct: 62 REPPRTLFPGGFKRPEIRVPALVLRVGADEALASGDAVVAAVARGVG---IVVLEAGEEG 118
Query: 125 GKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQG 168
G VYEAA LK+ V DRA L+AERVD+A+AV ASGV+L+D G
Sbjct: 119 GGRVYEAALSLKASVGDRAYLLVAERVDVASAVGASGVVLADDG 162
>gi|85857871|ref|YP_460073.1| GTPase dynamin-related [Syntrophus aciditrophicus SB]
gi|85720962|gb|ABC75905.1| GTPase dynamin-related [Syntrophus aciditrophicus SB]
Length = 559
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 15/224 (6%)
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINA 383
KQ + R VL + + K S E ++L + ++ + L V+VGE SGKSS +NA
Sbjct: 12 KQKYDFLRDVLQRCLSLTDKCSE-TEASAILKNRLALLQSVALFVVVGEVKSGKSSFVNA 70
Query: 384 LLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTP 443
LLG+ + P T I +LA E++ D LP +L+++ IVDTP
Sbjct: 71 LLGEDVCEVAPDPCTAVI-----QELAYGEERSKTVLGDYWERLTLPKTVLRDITIVDTP 125
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ-WKKKVVFVLNKSD 502
GTN I++ Q +TE ++P++DLV+FV A P T + L ++ W +K VFVL ++D
Sbjct: 126 GTNSIIRNHQTITENYIPKSDLVIFVFPAKNPHTATAWELLSLVRKDWHRKTVFVLQQAD 185
Query: 503 LYQN---AFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEA 543
L A E + E N++N ++ VSA+ L+
Sbjct: 186 LATQRELAVNQERVKQYAHER-----NVQNPVLFTVSAKRELDG 224
>gi|345018167|ref|YP_004820520.1| dynamin family protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033510|gb|AEM79236.1| Dynamin family protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 587
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 141/287 (49%), Gaps = 49/287 (17%)
Query: 356 DAVSQI-----DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--- 407
+AVS++ + F L+++G++ GKS+ N +LG L GVVP T+ IT +++S
Sbjct: 33 EAVSEVKNKFCNNIFYLMVLGQFKRGKSTFTNYMLGADILPTGVVPLTSVITKIKYSTDI 92
Query: 408 -------------------DLASEEQQRCERHPDGQ--YICYLPSPILKEMIIVDTPGTN 446
DL E+ + + +I Y I +++I+DTPG
Sbjct: 93 WAKVLYNDGRNENIDIKELDLYCTEKNNPKNIKGVKEIHIGYPFEFISNDVVIIDTPGIG 152
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+ + + ++ +AD V+F++S D P++E E FL + K+ FVLNK D Y N
Sbjct: 153 SVYKHNTDVAYSYINKADAVIFLLSVDPPISELEKEFLSKVSENVNKIFFVLNKID-YVN 211
Query: 507 AFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWR 566
EL E I+F + ++ +++ IYP+SA+ LE K+S KD D+
Sbjct: 212 EMELREIINFNENIVREIAKNDSINIYPISAKLALEGKIS------KD-------DNAIE 258
Query: 567 INTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETL 613
+ KLE L +FL KE+ ++ LE+ + ER++S C+T
Sbjct: 259 KSRVQKLEIDLQNFL------MKEKEKVLLESYAKNIERIISMCQTF 299
>gi|116750335|ref|YP_847022.1| dynamin family protein [Syntrophobacter fumaroxidans MPOB]
gi|116699399|gb|ABK18587.1| Dynamin family protein [Syntrophobacter fumaroxidans MPOB]
Length = 605
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 115/230 (50%), Gaps = 35/230 (15%)
Query: 345 SPLMEEVSLLIDAVSQI--DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT 402
S + EE +DA+ +E F LV++G++ GKS+ INALLG L +VP T+ +T
Sbjct: 20 SAVREETVRHLDALRAKLREEAFNLVVLGQFKRGKSTFINALLGANILPTAIVPLTSVVT 79
Query: 403 FLRF--------------------SDLASEEQQRCE---RHPDGQYICYLPSPILKEMI- 438
LRF S+L + +R + R + Y PS L+ +
Sbjct: 80 ILRFGPELKVEVRFLNESRVEINLSELPAHITEREDPENRKGVKEVTVYYPSEYLRGGVR 139
Query: 439 IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVL 498
I+DTPG + + F+P+ D +FV+SAD PL+ SE FL+ + + K+ FVL
Sbjct: 140 IIDTPGAGSVYAHNTDVAYNFLPQVDAGVFVVSADPPLSGSEHRFLKDVRGYVDKLFFVL 199
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIE----NVTIYPVSARSTLEAK 544
NK D E +EA+ F T+++L + V IYPVSAR LE K
Sbjct: 200 NKIDQVSED-ERKEALDF----TVRILEDDIGEGKVKIYPVSARWALEGK 244
>gi|410463201|ref|ZP_11316733.1| putative GTPase [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983663|gb|EKO40020.1| putative GTPase [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 569
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
++ EPFL V+VGE +GKSS+INALLG + P T+ I + Q+
Sbjct: 44 LTHAAEPFLFVVVGEVKAGKSSLINALLGAQVTDVAPDPCTDRIRVI-------GRQETV 96
Query: 418 ERHPDGQYICYLP--SPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
+ P G + + +P+L + IVDTPG + I+ R Q +TE F+PRADL LF S P
Sbjct: 97 AKAPSGDLVVRVAVDNPLLDGLAIVDTPGVDSIIDRHQEITEAFIPRADLALFTFSVLNP 156
Query: 476 LTESEVVFLRYTQ-QWKKKVVFVLNKSDL 503
+ S F W ++V F L +DL
Sbjct: 157 YSRSAWEFFDLVAGAWGRRVAFALTMADL 185
>gi|296132115|ref|YP_003639362.1| dynamin family protein [Thermincola potens JR]
gi|296030693|gb|ADG81461.1| Dynamin family protein [Thermincola potens JR]
Length = 587
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 29/208 (13%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL---------ASEEQQ 415
F LV++G++ GK++ IN+LLG L VVP T+ +T + + + S +
Sbjct: 46 FNLVVLGQFKRGKTTFINSLLGAEVLPTAVVPLTSIVTVISYGETLKITVVFKDGSTQDI 105
Query: 416 RCERHPDGQYIC----------------YLPSPILKEMI-IVDTPGTNVILQRQQRLTEE 458
R E+ P +YI PSP LK+ + ++DTPG I + T
Sbjct: 106 RLEQLP--EYITEAQNPNNIKNVKEVRILYPSPYLKDGVRLIDTPGVGSIYRNNTDETYN 163
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
++P+ D +F++S D P++++EV FL +++ K+ F+LNK D Y E E++ F K
Sbjct: 164 YIPKVDAAIFLLSVDPPISQAEVEFLDDIKKYAAKIFFILNKID-YLTPKERTESLEFSK 222
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLS 546
+ + + NV I+P+SA+ LE KL+
Sbjct: 223 QVLESKVGLANVRIFPLSAKLALEGKLA 250
>gi|333896445|ref|YP_004470319.1| dynamin family protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111710|gb|AEF16647.1| Dynamin family protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 579
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 156/308 (50%), Gaps = 53/308 (17%)
Query: 339 DVIKKASPLMEEVSL--LIDAVSQIDEPF-----LLVIVGEYNSGKSSVINALLGKRYLK 391
++ +K + +++S+ + DA+S I + F LV++G++ GKS+ N +LG L
Sbjct: 7 EIFEKVESISKDISVEAIEDAISDIKDKFSSNVFYLVVLGQFKRGKSTFTNYILGIDMLP 66
Query: 392 DGVVPTTNEITFLRFS----------------------DLASEEQQRCE--RHPDGQYIC 427
GVVP T+ IT +++S DL E+ + + +I
Sbjct: 67 TGVVPLTSVITKVQYSIEVWAKVLYEDGRIDNIDVKELDLYCTEKNNPKNIKKVKEIHIG 126
Query: 428 YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT 487
Y + +++I+DTPG + + + ++ +AD V+F++S D P++E E FL
Sbjct: 127 YPFEFVSNDVVIIDTPGIGSVYKHNTDVAYGYINKADAVIFLLSVDPPISELEKEFLSQI 186
Query: 488 QQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMK-LLNIENVTIYPVSARSTLEAKLS 546
+ K+ FVLNK D Y + EL+E I F EN +K + +N+ IYP+SA+ LE K+S
Sbjct: 187 SENVNKIFFVLNKID-YVSEIELDEIIKF-NENIIKEITKHDNIIIYPISAKLALEGKIS 244
Query: 547 VSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERL 606
KD+ ++ S + KLE L +FL T KE++ LE+ + +R+
Sbjct: 245 ------KDNE--AIEKSRAK-----KLEVDLQNFL----MTEKEKVL--LESYAKNIDRI 285
Query: 607 LSSCETLV 614
+S C+T +
Sbjct: 286 ISMCQTFI 293
>gi|328954416|ref|YP_004371750.1| dynamin family protein [Desulfobacca acetoxidans DSM 11109]
gi|328454740|gb|AEB10569.1| Dynamin family protein [Desulfobacca acetoxidans DSM 11109]
Length = 584
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 29/219 (13%)
Query: 351 VSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF---- 406
+S ++D + Q F LV++G + GKS++INALLG+ L V+P T+ +T + +
Sbjct: 29 ISFILDKLRQ--NRFNLVMLGAFKRGKSTLINALLGESLLPTAVIPLTSVVTIIGYGEKL 86
Query: 407 ----------------SDLASEEQQRCERHPDGQY----ICYLPSPILKEMI-IVDTPGT 445
S+LA+ +R H I Y PS LK+ + I+DTPG
Sbjct: 87 RIDVLFHNGQRRQIAGSELAAYITERGNPHNKKGVLEVDIAY-PSAYLKDGVRIIDTPGV 145
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ + ++P+ D +FV++ D PL+ SE FL+ +++ K+ FVLNK D
Sbjct: 146 GSVYSHNTEVAYNYLPQVDAAIFVVTVDPPLSASEEEFLKDIREYVHKLFFVLNKIDYVA 205
Query: 506 NAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
A E +EA+ F ++ L +N+ I+P++A+ LE K
Sbjct: 206 EA-ERQEALDFTRQVLTTSLGTDNLQIFPLTAKLALEGK 243
>gi|422293429|gb|EKU20729.1| dynamin family protein [Nannochloropsis gaditana CCMP526]
Length = 795
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 89/149 (59%), Gaps = 7/149 (4%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
D + +++ E+++L V+ E++ +L DA+ Q+++ F++ +VGE+N+GKS
Sbjct: 126 DAQASIVKEEQALLERLHRVLTSMEAGQEDLDILKDAICQVEDLFMVCVVGEFNAGKSRF 185
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI-----CYLPSPILK 435
INALLG +YLK+GV PTT +I F++ D A + + GQ I L P+L+
Sbjct: 186 INALLGDKYLKEGVTPTTAKICFVKHVDRAGAPTRYAD--AQGQMIDEVEEKLLDVPLLQ 243
Query: 436 EMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
+ +VDTPGTN ++QR ++ E + R +
Sbjct: 244 NLALVDTPGTNAVIQRHSQVGVEVLGRGE 272
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 34/183 (18%)
Query: 448 ILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKK-------------- 493
+L+ +LT VPRAD+VLF+ S RP +ESE FL QW KK
Sbjct: 321 LLRSLPQLTYRIVPRADVVLFLTSIARPFSESERTFLTSIAQWHKKVTGKGEDGTPARRE 380
Query: 494 ----VVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIEN----VTIYPVSARSTLEAKL 545
VV VLN+ DL ++ ++EE +V+ + +L E +++P+SA+ LEAK+
Sbjct: 381 EGRCVVLVLNQCDL-RSREDVEEVTEYVRAHARAVLGTEADLKVGSVFPISAKLALEAKV 439
Query: 546 SVSSAVGKDHS-ELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAE 604
V K HS + W+ + F L++ L + L T + +++ KL PI +AE
Sbjct: 440 -----VAKPHSPTVGPGALAWQASNFAALQQYLDTLL-----TDEAKLQSKLLNPIGVAE 489
Query: 605 RLL 607
RLL
Sbjct: 490 RLL 492
>gi|171911570|ref|ZP_02927040.1| GTPase dynamin-related protein [Verrucomicrobium spinosum DSM 4136]
Length = 580
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 142/287 (49%), Gaps = 36/287 (12%)
Query: 331 RSVLLEAIDVIKKASPLM----EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG 386
RS L A+ +K P + EE +L + V+ + +PF+ V+VGE N GKS+ +NAL G
Sbjct: 10 RSRLGTALYSLKALVPELGAGPEEGGILENLVNSLKDPFVFVVVGEVNVGKSTFLNALFG 69
Query: 387 KRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH-PDGQYI--CYLPSPILKEMIIVDTP 443
K G+VPTT++I F + RH P + + Y P LK+ IVDTP
Sbjct: 70 TDLTKTGIVPTTDKIFFFKHGPQL--------RHVPVSRTLEEVYAPVEFLKDFHIVDTP 121
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSD 502
GTN I Q +TE FVP AD+V+FV SA P S FL + +QW + V+FVL ++D
Sbjct: 122 GTNSIENEHQEITERFVPLADMVIFVFSAMNPWGASTWQFLDKVHRQWMRHVIFVLQQAD 181
Query: 503 LYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVND 562
L E I +++ ++L +PV S A L+ SS G D +L
Sbjct: 182 L-----RTPEEIVSIQQYMLQLCRQRFGREFPVFPVSAKRAYLARSS--GLDREKLMEES 234
Query: 563 SHWRINTFDKLEKLLYSFLDGSSSTGKERMRL-KLETPIRIAERLLS 608
+ +LE+ + + GS RL KL +RIA+ ++
Sbjct: 235 G------YPRLEQHISDCIGGSGP------RLGKLANALRIAQTMVG 269
>gi|239906552|ref|YP_002953293.1| hypothetical protein DMR_19160 [Desulfovibrio magneticus RS-1]
gi|239796418|dbj|BAH75407.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 569
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPD 422
EPFL V+VGE +GKSS+INALLG P T+ I + ++ + P
Sbjct: 49 EPFLFVVVGEVKAGKSSLINALLGAEVTDVAPDPCTDRIRVI-------GREETVAKAPS 101
Query: 423 GQYICYLP--SPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
G + + +P+L + IVDTPG + I+ R Q +TE F+PRADL LF S P + S
Sbjct: 102 GDLVVRVAVDNPLLDGLAIVDTPGVDSIIDRHQEITEAFIPRADLALFTFSVLNPYSRSA 161
Query: 481 VVFLRYTQ-QWKKKVVFVLNKSDL 503
F W ++V F L +DL
Sbjct: 162 WEFFDLVAGAWGRRVAFALTMADL 185
>gi|443328862|ref|ZP_21057455.1| dynamin family protein [Xenococcus sp. PCC 7305]
gi|442791598|gb|ELS01092.1| dynamin family protein [Xenococcus sp. PCC 7305]
Length = 530
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 134/298 (44%), Gaps = 69/298 (23%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
DR Q IE S+ +EA + P ++ Q+ PF + I GE+N+GKSS+
Sbjct: 14 DRSLQNIEKVESLFVEAQSLFPDFEPD------IVGIKQQLKSPFSIFICGEFNAGKSSL 67
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIV 440
+N L G++PTT I +P+G L ++ +
Sbjct: 68 LNHLGESAIAPVGILPTTKAIE---------------SYNPEG----------LGGLVFI 102
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ-WKKKVVFVLN 499
D+PGTN I+ + Q LTE ++ +AD++LF+ S +RPL++SE FL W +KV+ +N
Sbjct: 103 DSPGTNSIIDQHQELTENYLKQADIILFLTSIERPLSKSEQDFLTIVDNTWARKVIVAVN 162
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS 559
K DL E+++ +++ E + E I+P+S+ S G
Sbjct: 163 KIDLATPE-EIDQVTNYIAEGLSNIFT-EAPPIFPISSHS----------GAG------- 203
Query: 560 VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKD 617
++ + L SFL KERM+LKL+ P LL E LV K+
Sbjct: 204 ----------MEEFKGFLVSFL-----AEKERMKLKLQGP---QNSLLVYLEQLVSKN 243
>gi|121535975|ref|ZP_01667768.1| Dynamin family protein [Thermosinus carboxydivorans Nor1]
gi|121305435|gb|EAX46384.1| Dynamin family protein [Thermosinus carboxydivorans Nor1]
Length = 579
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 111/214 (51%), Gaps = 26/214 (12%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDG- 423
F LV+VG+Y GK++ INALLG L +VP T+ +T + + + + ++ P
Sbjct: 48 FNLVVVGQYKRGKTTFINALLGADILPTAIVPLTSIVTIMEYGEQVEATVEFLDKAPQKI 107
Query: 424 ------QYIC----------------YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFV 460
QYI PSP L+ + ++DTPG + Q +T F+
Sbjct: 108 EIAALPQYITETENPNNFKNVKLVTITYPSPYLQGGLRLIDTPGIGSVFQHNTDVTYSFL 167
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
D +F++SAD P++ E FL+ ++ +K+ F+ NK DL N + E++++F ++
Sbjct: 168 QEVDAAIFLLSADPPISRDECQFLKDITKYVRKIFFIQNKIDLV-NEKDREQSMNFSQKI 226
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLS-VSSAVGK 553
+ + ++ + I+P+SA+ LE ++ +S +GK
Sbjct: 227 IKQEVKLDEIAIFPLSAKMALEGAITDNASLIGK 260
>gi|91202832|emb|CAJ72471.1| conserved hypothetical dynamin like protein [Candidatus Kuenenia
stuttgartiensis]
Length = 600
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 28/206 (13%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS---------------DL 409
F LV++G++ GK+++IN+L+GK L VVP T+ +T LRFS ++
Sbjct: 46 FNLVVLGQFKRGKTTLINSLIGKEVLPSSVVPLTSIVTILRFSHEIRCIIFMEDGSEREI 105
Query: 410 ASEEQQR--CERHPDGQY------ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFV 460
+ EE R E+ G I PSP L+ M++VDTPG T F+
Sbjct: 106 SVEELPRYVTEKENPGNVRRVRCAIIEYPSPFLEAGMMLVDTPGVGSTFLHNTETTYGFL 165
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD-LYQNAFELEEAISFVKE 519
D LF++SAD P+++ E L + +K+ FVLNK D L N E+EE ++F K+
Sbjct: 166 DHLDAALFLMSADVPISQVEKELLDTIKDSTQKIFFVLNKIDNLTSN--EMEEIVAFNKQ 223
Query: 520 NTMKLLNIENVTIYPVSARSTLEAKL 545
++ + I+P+SAR L+AK+
Sbjct: 224 -VLEEMGFAVHKIWPISAREALKAKI 248
>gi|116750416|ref|YP_847103.1| dynamin family protein [Syntrophobacter fumaroxidans MPOB]
gi|116750458|ref|YP_847145.1| dynamin family protein [Syntrophobacter fumaroxidans MPOB]
gi|116699480|gb|ABK18668.1| Dynamin family protein [Syntrophobacter fumaroxidans MPOB]
gi|116699522|gb|ABK18710.1| Dynamin family protein [Syntrophobacter fumaroxidans MPOB]
Length = 614
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 39/257 (15%)
Query: 320 EDREKQLIETE--RSVLLEAI-DVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSG 376
E R +Q+ E + RS LLE I DV+ + + L + V F LV+VG++ G
Sbjct: 12 ESRPRQIGEFQQLRSRLLECIADVLALERSCTQPCAELREKVET--NTFNLVVVGQFKRG 69
Query: 377 KSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY----------- 425
K+ +INAL+G L VVP T+ +T L + EE + + DGQ
Sbjct: 70 KTYLINALMGADLLPVSVVPLTSIVTVLSYG----EELRVKVFYNDGQVREADPLTLSEY 125
Query: 426 ----------------ICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
I PSP LK+ + ++DTPG + + ++P++D LF
Sbjct: 126 VTEAGNPNNMKNVKEVIITYPSPYLKDGVRLIDTPGVGSVYVHNTDVAYRYLPKSDAALF 185
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIE 528
++S D+P++++E+ FL +Q+ ++ F+LNK D + E+E++I F + ++L
Sbjct: 186 LLSVDQPVSKAELEFLADVRQYSGRIFFLLNKID-HLTEDEIEKSIVFSRGALEEVLG-G 243
Query: 529 NVTIYPVSARSTLEAKL 545
V +YPVSA+ L+ KL
Sbjct: 244 GVRVYPVSAKLALQGKL 260
>gi|423456189|ref|ZP_17433042.1| hypothetical protein IEE_04933 [Bacillus cereus BAG5X1-1]
gi|401131609|gb|EJQ39261.1| hypothetical protein IEE_04933 [Bacillus cereus BAG5X1-1]
Length = 604
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 154/304 (50%), Gaps = 45/304 (14%)
Query: 317 VKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSG 376
+ +E+R+ L + + + D++ ++ + + +L+D + + +V+VGE+ +G
Sbjct: 1 MNYEERKTDLFNKIQVLRNQVCDILPQSPQIRKFDEVLLDLKEDL---YTVVVVGEFKNG 57
Query: 377 KSSVINALLGKRYLKDGVVPTTNEITFLRF-----------------SDLASEEQQR--- 416
KS+ +NALLG+ L V PTT I L + S L +E Q+
Sbjct: 58 KSTFVNALLGEPLLPVDVTPTTAAIHALVWGSERSFEVHKSDGTVERSGLQAETLQKYVA 117
Query: 417 -CERHPDG-QYI--CYLPSPILK-EMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVIS 471
+ +PD Y+ C +P+P+LK ++++VDTPG N + + + +T EF+PRAD+VLF++
Sbjct: 118 TADFNPDEVNYLKLC-MPAPLLKNKVVLVDTPGVNDLNKHRSNITYEFIPRADVVLFMLD 176
Query: 472 ADRPLTESEVVFLRYTQQWK--KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIEN 529
PL +E F+ + K +++FV N +D + E+EE F+ ++ IE
Sbjct: 177 MTAPLKRTEEQFINNSLLGKGLDRLIFVANFADRV-DEEEVEELSEFISNRIQRVTEIEC 235
Query: 530 VTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGK 589
++P+SAR LEAK + KD + W + +EK ++ + S + +
Sbjct: 236 PRVFPISAREGLEAKQT------KD-------EELWEYSGLGDVEKNIWDMIQNGSCSEE 282
Query: 590 ERMR 593
+ MR
Sbjct: 283 KLMR 286
>gi|262200027|ref|YP_003271236.1| dynamin family protein [Haliangium ochraceum DSM 14365]
gi|262083374|gb|ACY19343.1| Dynamin family protein [Haliangium ochraceum DSM 14365]
Length = 1164
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 31/207 (14%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-------------- 407
D+P L+ ++GE++SGKS+ +NA +G G+ PTT I +R+
Sbjct: 585 DQPLLVTVMGEFSSGKSTFVNAFIGADVAPTGITPTTATINIVRYGRERGGRINYRDGSI 644
Query: 408 ----------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTE 457
L + + +R R D I + P P L+ + IVDTPG N IL + +
Sbjct: 645 DTVAWDDLGPTLRALDDERA-RAIDTVEILF-PLPQLQRVNIVDTPGLNSILPEHEEVAR 702
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
F+ RAD V++V +A++ SE L +Q K+V+ VLNK D + A E++ + +V
Sbjct: 703 GFIARADAVIWVFTANQAGKASERSALESIRQEGKRVLGVLNKKDQLRTA-EVDTLVEYV 761
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
++ +L+ + PV+AR LE +
Sbjct: 762 QDELGELVEC----VVPVAARVALERR 784
>gi|20808307|ref|NP_623478.1| GTPase (dynamin-related) [Thermoanaerobacter tengcongensis MB4]
gi|20516910|gb|AAM25082.1| predicted GTPases (dynamin-related) [Thermoanaerobacter
tengcongensis MB4]
Length = 585
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 130/273 (47%), Gaps = 44/273 (16%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F LV++G++ GKS+ IN +LG L GVVP T+ IT +++S
Sbjct: 47 FYLVVLGQFKRGKSTFINYILGADILPTGVVPLTSVITKVQYSTSIWAKVIHNDGMEKDI 106
Query: 408 DLASEEQQRCERHPDGQ-------YICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
D+ + ER+ +I Y + K+++IVDTPG + + + ++
Sbjct: 107 DIDELDLYCTERNNPKNIKGVKEIHIGYPFDFVAKDVVIVDTPGIGSVYKHNTDIAYNYI 166
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
+AD V+F+ S D P++E E FL + K+ FVLNK D Y EL+E +++ +
Sbjct: 167 DKADAVIFLFSVDPPISEVEKEFLSEISKSVDKIFFVLNKID-YVTEKELKEIVTYNRNI 225
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSF 580
++ ++ +YP+SA+ LE KL KD L + LE L +F
Sbjct: 226 IREITGNSDIFLYPISAKLALEGKLL------KDEGSLKKSGVQM-------LENDLRNF 272
Query: 581 LDGSSSTGKERMRLKLETPIRIAERLLSSCETL 613
L G E+ ++ LE + +R++S C+T
Sbjct: 273 LLG------EKEKVLLERYTKNIKRIISMCKTF 299
>gi|355572820|ref|ZP_09043853.1| Dynamin family protein [Methanolinea tarda NOBI-1]
gi|354824067|gb|EHF08322.1| Dynamin family protein [Methanolinea tarda NOBI-1]
Length = 300
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 37/206 (17%)
Query: 332 SVLLEAIDVIKKASPLMEE----VSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGK 387
S+L AI ++ P ME +S L D +S+ F L ++G++ GKS+++NALLG+
Sbjct: 30 SLLGRAISILHDLGPAMEPQERALSGLRDRLSEGR--FQLAVLGQFKRGKSTLLNALLGE 87
Query: 388 RYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYIC------------YL------ 429
L V+P T TF+R + + E+ DG C Y+
Sbjct: 88 DILPSSVIPLTAIPTFIRHGTERTVKVHFLEQGKDGTIPCQSPEEMNRILLDYVSEEANP 147
Query: 430 -------------PSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPL 476
PS IL++++++DTPG + +T F+P+ D LF++SAD P+
Sbjct: 148 KNRKGVSSVEITHPSRILRDVVLIDTPGIGSTHRHNTEMTLNFLPQCDAALFLVSADPPI 207
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSD 502
TE EV FLR+ ++ + FV NK D
Sbjct: 208 TEVEVDFLRHVREKVACIFFVQNKVD 233
>gi|392410518|ref|YP_006447125.1| enolase [Desulfomonile tiedjei DSM 6799]
gi|390623654|gb|AFM24861.1| enolase [Desulfomonile tiedjei DSM 6799]
Length = 433
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----LASEEQQRCERH 420
F L ++G++ GKS+++NA LG+ L VV T TFL++ S + R R
Sbjct: 63 FHLAVLGQFKRGKSTLLNAFLGEALLPTSVVSLTAIPTFLQYGPKILVRVSYQDNRPARE 122
Query: 421 PDGQYI---------------------------CYLPSPILKE-MIIVDTPGTNVILQRQ 452
G+ + + P+ IL+ ++++DTPG
Sbjct: 123 FSGESLKDLVSILEGFVTEKGNPKNRLGVLHVDIFHPAQILQHGVVLIDTPGIGSTFTHN 182
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEE 512
T F+P+ D LFV+SAD PLTE E FL+ ++ F+ NK D Y +A EL+E
Sbjct: 183 TEATLNFLPQCDAALFVVSADPPLTEVEAEFLKNVHSRVSRLFFIFNKVD-YLSAEELQE 241
Query: 513 AISFVKEN-TMKLLNIENVTIYPVSARSTLEAKL 545
A+ F K T K + + I+ VSAR L++KL
Sbjct: 242 AVGFFKRVLTEKTQSSNDHPIFCVSARRGLDSKL 275
>gi|392413623|ref|YP_006450230.1| dynamin family protein [Desulfomonile tiedjei DSM 6799]
gi|390626759|gb|AFM27966.1| dynamin family protein [Desulfomonile tiedjei DSM 6799]
Length = 628
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-DLASEEQQRCERHPD- 422
F L I+G++ GKSS++N+LLG L VVP T TF+++ DL + R R D
Sbjct: 65 FHLAILGQFKRGKSSLLNSLLGHALLPTSVVPLTAIPTFVQYGPDLRISVRYRNGRPADE 124
Query: 423 -----------------------------GQYICYLPSPILKE-MIIVDTPGTNVILQRQ 452
Q P+PIL+ ++++DTPG L
Sbjct: 125 FVGKPVEEAVKILESFVTEEGNPKNRLGVTQVDILHPAPILQHGVVLIDTPGIGSTLTHN 184
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEE 512
+ T F+P+ D LFV+SAD PLTE E FL+ + ++ F+ NK D Y + E E
Sbjct: 185 TQATLNFLPQCDAALFVVSADPPLTEVEAEFLQAVKSKVARLFFIFNKID-YLSETEREA 243
Query: 513 AISFVKENTM-KLLNIENVTIYPVSARSTLEAKL 545
A+ F K+ K+ ++ I+ VS R L+AKL
Sbjct: 244 ALGFFKKVLAEKMEAADDYPIFCVSTRLGLDAKL 277
>gi|150390993|ref|YP_001321042.1| dynamin family protein [Alkaliphilus metalliredigens QYMF]
gi|149950855|gb|ABR49383.1| Dynamin family protein [Alkaliphilus metalliredigens QYMF]
Length = 586
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 114/215 (53%), Gaps = 27/215 (12%)
Query: 356 DAVSQIDE-PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEE- 413
D +++++E F + ++G++ GK++++N +GK L GVVP T T +++ + +
Sbjct: 37 DLLNRVEELEFHVAVMGQFKRGKTTILNYFIGKEILPTGVVPITAITTKIKYGNKPQAKI 96
Query: 414 --QQRCERHPD----GQYI----------------CYLPSPILKE-MIIVDTPGTNVILQ 450
Q E+ D G+YI YLP+ +L+ ++++DTPG +
Sbjct: 97 IFQGDLEKSVDINSIGEYISEQKNPENKKKVKQVEVYLPAEVLENGLVLIDTPGIGSTYK 156
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
++ A+ V+ V+SAD P+ E+E+ L +++ K+ F+ NK D Y + E+
Sbjct: 157 HNTEAAYNYLSEANAVILVMSADTPVGEAEIGLLSQVKKYIDKIFFLQNKVD-YLSQAEV 215
Query: 511 EEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
EE++ F KE + + IE IYPVSA+ LE K+
Sbjct: 216 EESLHFSKEVIAETIGIE-PRIYPVSAKLALEGKV 249
>gi|282165139|ref|YP_003357524.1| hypothetical protein MCP_2469 [Methanocella paludicola SANAE]
gi|282157453|dbj|BAI62541.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 598
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 125/270 (46%), Gaps = 28/270 (10%)
Query: 358 VSQID-EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--------- 407
++++D + F LV++G++ GK++ INALLG L VVP T+ IT +RF
Sbjct: 40 IAKLDSDTFNLVVLGQFKRGKTTFINALLGDSVLPTAVVPLTSIITVIRFGPVPRTTVIY 99
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQ 452
D +E G PS LKE ++I+DTPG
Sbjct: 100 QDGRSDVIGPELLGDYVTERGNPRNVKRVGHVEIEYPSDYLKEGVMIIDTPGIGSTFLHN 159
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEE 512
+T F+ + D +F++S D P+++ E+ FL + KK F+LNK D +A E++E
Sbjct: 160 TEVTYSFLSKVDAAVFMLSIDPPVSDVELRFLEDVGKHVKKFFFILNKVD-RADAEEVKE 218
Query: 513 AISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDK 572
+I+F + + + E ++P+SA+ LE K + + + + + T DK
Sbjct: 219 SIAFNRAVIGEKMGAEP-KLFPLSAKQALEGKTKGDRELLQRSGYVDFDRALGTFLTTDK 277
Query: 573 LEKLLYSFLDGSSS-TGKERMRLKLETPIR 601
L S LD +S R+ L +E R
Sbjct: 278 CGVFLRSILDRASGLVEARRLSLAIEKKTR 307
>gi|269792882|ref|YP_003317786.1| dynamin family protein [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100517|gb|ACZ19504.1| Dynamin family protein [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 407
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 34/313 (10%)
Query: 370 VGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR---------FSD------------ 408
VGE+ GKS+++NAL+G L G +P TN IT L F D
Sbjct: 42 VGEFKRGKSTLLNALVGSLVLPTGALPLTNVITLLEHGEPGLTVTFRDGSTRDLPIDQLQ 101
Query: 409 -LASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLV 466
SE+ R + PSP L+ +++VDTPG + Q + E++PR DL
Sbjct: 102 SFVSEDLNPGNRLQVRWALVRCPSPFLQGGLVLVDTPGFESLHSSQTQEAREYLPRIDLA 161
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLN 526
LF +S D P++ E+ L+ +V+ VLNK D + + EL+ I ++ + L+
Sbjct: 162 LFALSVDSPMSAREMALLKDLSSTVPEVILVLNKID-FLSRDELDRMIRYLSSAVERELS 220
Query: 527 IENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--YSFLDGS 584
+ ++PVSAR + + + A ++H ++ RI +LL + S
Sbjct: 221 -RPLPVFPVSARLSHQDPFAWGLAALREHLSSTLKSQGTRIQLSANERRLLSVVGSISAS 279
Query: 585 SSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMES 644
+S + +R ++ +R LS E L ++ DA+ L + +DSL V +M+
Sbjct: 280 ASVELDSLRQPVQVLKDRIDRFLSGVEELRLRRS-DAE---ALVMKDVDSL---VARMDR 332
Query: 645 ESISWRRKTLSLI 657
E RR L+
Sbjct: 333 ELDRLRRDLPDLV 345
>gi|383318548|ref|YP_005379389.1| Dynamin family [Methanocella conradii HZ254]
gi|379319918|gb|AFC98870.1| Dynamin family [Methanocella conradii HZ254]
Length = 586
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--------------- 407
+ F L ++G++ GK++ INALLG L VVP T+ IT +R+
Sbjct: 41 DSFNLAVLGQFKRGKTTFINALLGDNVLPTAVVPLTSIITAIRYGSAPKTTVIYLDGRSE 100
Query: 408 --------DLASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEE 458
D +E G PS LKE + I+DTPG +T
Sbjct: 101 AIEPSQLGDYVTERGNPKNARRVGHVEIEYPSDYLKEGVTIIDTPGIGSTFLHNTEVTYN 160
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
F+ + D +F++S D P++E E+ FL ++ KK+ FVLNK D +A E+ E+I+F
Sbjct: 161 FLSKVDAAVFMLSVDPPVSEVELKFLEDVRKHVKKLFFVLNKVD-NASAAEVSESIAFNG 219
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKL 545
+ + E + P+SAR LEAKL
Sbjct: 220 GVIGEKMGAEP-KVCPLSARQALEAKL 245
>gi|53804685|ref|YP_113658.1| hypothetical protein MCA1193 [Methylococcus capsulatus str. Bath]
gi|53758446|gb|AAU92737.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 614
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 43/265 (16%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------------------ 406
F ++ VG++ GK+S+INALLG+ L VP T+ +T L +
Sbjct: 55 FDVLTVGQFKRGKTSLINALLGENLLPTAAVPLTSVVTVLAYGYPPRITVQPLEGSPFDI 114
Query: 407 -----SDLASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFV 460
+D +E + + PSP+L + IVDTPG + + +
Sbjct: 115 RPDMLADYITEPGNPGNAKGVREVLIRTPSPLLGNGVRIVDTPGVGSVFRHNTDTAWARL 174
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
P+ D LFV+SAD+ ++E+E+ FL +++ ++ F+LNK D+ Q A AI
Sbjct: 175 PQCDAALFVLSADQAVSEAELEFLHEVRKYAGRIFFLLNKIDILQEAD--TAAIEHFSRR 232
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFD-KLEKLLY- 578
+ V ++P+SAR L K G D + L + R+ F LE+ L
Sbjct: 233 VLAEAVGTEVRLFPISAREALMGK------AGNDPARLEAS----RLPVFTAALERFLLE 282
Query: 579 ---SFLDGSSSTGKERM--RLKLET 598
+ L ++++G R+ RL+LET
Sbjct: 283 EKGALLLDAAASGLARLTGRLRLET 307
>gi|386811573|ref|ZP_10098798.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403843|dbj|GAB61679.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 595
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 30/245 (12%)
Query: 328 ETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGK 387
+TE ++E I+V+ K + LL + F LV +G++ GK+++IN+L+G+
Sbjct: 9 KTEILAVIEDIEVLTKEEFGKTDDRLLTIKEQLVSNCFNLVTLGQFKRGKTTLINSLIGR 68
Query: 388 RYLKDGVVPTTNEITFLRFSDL---------ASEEQQRCERHPDGQYI------------ 426
L +VP T+ +T L+F + SE++ R E D Y+
Sbjct: 69 EILPSSIVPLTSVVTILKFGEEVRCGVFMEDGSEKKIRIEELSD--YVTEKGNPKNIRGV 126
Query: 427 -CYL---PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
C PS L++ M++VDTPG T EF+ D LF++SAD P+++ E
Sbjct: 127 RCARIEHPSSFLEQGMLLVDTPGVGSTFLHNTETTYEFLDHLDAALFLMSADVPISQVEK 186
Query: 482 VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
L + +K+ FVLNK D E+EE I+F K + ++ + I PVSAR L
Sbjct: 187 ELLDTIKDSIQKIFFVLNKIDNLSPE-EIEEIIAFNK-HVLEEMGFTVHEILPVSAREAL 244
Query: 542 EAKLS 546
+AK++
Sbjct: 245 KAKMT 249
>gi|149919806|ref|ZP_01908283.1| putative atp /gtp binding protein [Plesiocystis pacifica SIR-1]
gi|149819413|gb|EDM78844.1| putative atp /gtp binding protein [Plesiocystis pacifica SIR-1]
Length = 1111
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 26/236 (11%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--- 405
E + ++I A ++ P + I+GE+++GKS+ +NALLG+ GV+PTTN I R
Sbjct: 633 EALRMVIAARERLARPLTIAIMGEFSAGKSTFVNALLGEAVAPMGVLPTTNTINVFRRGA 692
Query: 406 ------------FSDLASEEQQRCERHPD---GQYICYLPSPILKEMI----IVDTPGTN 446
S +A+ E R+ D I +L + E + +VDTPG N
Sbjct: 693 GRGARVHYRDATISTVAAGELDAYLRNLDDREADRIRHLEIDRVGERMGDAAVVDTPGLN 752
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+ + + + EF+ AD V+++ SA + T +E L ++ +KV+ VLNK D +
Sbjct: 753 ALDEYHETVAREFIEEADAVVWLFSATQGGTATEAGILAELREGGRKVLGVLNKVDTLDS 812
Query: 507 AFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVND 562
+ +E ++++E ++L V + P+SA L+ + S G+ +V D
Sbjct: 813 EADRDELTTYLREQLGEVL----VEVLPLSAAQALDYRTGASPDSGQGVDPFTVVD 864
>gi|225181722|ref|ZP_03735161.1| Dynamin family protein [Dethiobacter alkaliphilus AHT 1]
gi|225167593|gb|EEG76405.1| Dynamin family protein [Dethiobacter alkaliphilus AHT 1]
Length = 589
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 34/215 (15%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-----------DLA 410
+E F L ++G++ GKS+ INALLG L VVP T TFL +S D
Sbjct: 42 NERFHLAVLGQFKRGKSTFINALLGTDLLPTSVVPLTAIPTFLLWSPQIGVTVHYQNDKT 101
Query: 411 SEEQQRC---------------ERHPDGQY-ICYL----PSPILKE-MIIVDTPGTNVIL 449
S+ Q+ E +P + I Y+ PS L ++++DTPG
Sbjct: 102 SDTQRNLSKEALKDTLARIVTEEGNPHNEKGISYVEILYPSSFLNNGVVLIDTPGIGSTH 161
Query: 450 QRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFE 509
Q +T +F+ + D LFV+SAD P+TE EV FL+ ++ ++ F++NK+D Y + E
Sbjct: 162 QHNTEMTLDFLAQCDAALFVVSADPPITEVEVEFLKQVEKAVARIFFIVNKAD-YLDKQE 220
Query: 510 LEEAISFVKENTMKLLNIENV-TIYPVSARSTLEA 543
+ +SF+++ + V I+ VSA LEA
Sbjct: 221 KKTYLSFLEKVLKEQAGFNEVKAIFAVSALQGLEA 255
>gi|78043640|ref|YP_360924.1| hypothetical protein CHY_2105 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995755|gb|ABB14654.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 599
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 50/290 (17%)
Query: 328 ETERSVL-LEAIDVIKKASPLMEEVSLLIDAVSQ--IDEPFLLVIVGEYNSGKSSVINAL 384
+TE ++L L+ +++++ P E I + + ++E F L ++G++ GKS+ INAL
Sbjct: 16 DTEMNILFLKTLEILQSLGPEFSENLQKIRGLQERFLNERFHLAVLGQFKRGKSTFINAL 75
Query: 385 LGKRYLKDGVVPTTNEITFLRFS-----------DLASEEQQRCERHPDGQYIC------ 427
LG L V+P T FL + L EE ++ ++
Sbjct: 76 LGDDLLPTAVLPLTAVPIFLLWGPEARVRVFLQEGLQKEEFTGQDKEEISAFLAQFVTEA 135
Query: 428 --------------YLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISA 472
+ PS +L K ++++DTPG + T F+P+ D LF++SA
Sbjct: 136 GNPKNYKKVSQVEVFYPSLLLQKGVVLIDTPGIGSTFRHNTETTLNFLPQCDAALFLVSA 195
Query: 473 DRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENV-T 531
D P+TE EV FL+ + + F+LNK D Y E+ ++F+K + + IE
Sbjct: 196 DPPITEVEVEFLKAVRTKVAHLFFILNKVD-YLKKEEIAALVTFIKNVLREQVGIEGEPP 254
Query: 532 IYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFL 581
++ VSAR LEA+ +D EL W + D++ L FL
Sbjct: 255 LFCVSARLGLEAR-------KRDDPEL------WEQSGLDEVWHYLIDFL 291
>gi|390939599|ref|YP_006403336.1| dynamin family protein [Sulfurospirillum barnesii SES-3]
gi|390192706|gb|AFL67761.1| dynamin family protein [Sulfurospirillum barnesii SES-3]
Length = 674
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 164/368 (44%), Gaps = 55/368 (14%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF--------------- 406
+EP + I G+++SGKS+ +NALL K L G+ P T+++ ++R+
Sbjct: 60 EEPMKVAITGQFSSGKSTFLNALLAKSILPTGITPVTSKVNYIRYGEAFKIRVRYKDGRD 119
Query: 407 -----SDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
S+++ QR + Y P ILK+++ VDTPG N + TE+ +
Sbjct: 120 EYHDISNISHFTDQRGSVEDIAYLVLYAPLNILKDVVFVDTPGLNSQAASDTQTTEKVLK 179
Query: 462 RADLVLFVISADRPLTESEV-VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
D ++++ D SE+ V Y +++ K + VLN+ D + ++EE ++VK
Sbjct: 180 EVDGIIWLTLIDNAGKMSELQVLEEYLGKYQNKSLCVLNQKDKFTPE-QVEETTNYVKSA 238
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSF 580
K + + P+SAR LE++ + ++ + ++D H ++
Sbjct: 239 FQKFFS----DVIPISARQALESRSHDKKVMMQECLDTFISDLHVKL------------- 281
Query: 581 LDGSSSTGKERMRLK-LETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYV 639
G ER+ K +E + ++ + ET+V D + L +N ID + E++
Sbjct: 282 -----KEGSERLDFKAIENDFKAYQQ---TVETIVQSDLSANMKLLEDSN--IDKVLEFI 331
Query: 640 MKMESESISWRRKTLSLIDSTKSRVVKLI-ESTLQISNLDIVASYVFRGEKSAAMPST-- 696
+ E + S + K ++ + KLI + L +S D + + R E A T
Sbjct: 332 -RSEIQPKSTQSKEFAITKEIQEITAKLIAQHELFLSIYDELLEEIVRFEAEAKGLFTEL 390
Query: 697 -SRIQHDI 703
S+ HD+
Sbjct: 391 KSKFSHDL 398
>gi|255994222|ref|ZP_05427357.1| dynamin family protein [Eubacterium saphenum ATCC 49989]
gi|255993890|gb|EEU03979.1| dynamin family protein [Eubacterium saphenum ATCC 49989]
Length = 446
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 28/202 (13%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN-----------EITFLRFSDLASE- 412
+L I+G++ GKSS+IN +LGK L G++P T+ +I ++ + D S+
Sbjct: 60 MILSIMGQFKRGKSSLINTMLGKELLPVGIIPITSVVTRITKADKEDIAYVHYEDTTSKT 119
Query: 413 -----------EQQRCERHPDGQYICYLPSPIL--KEMIIVDTPGTNVILQRQQRLTEEF 459
EQ+ + + + S L K +++VDTPG I + + +F
Sbjct: 120 VPITELSGFISEQENPDNLLGVESVEIKTSGKLLDKGIVVVDTPGVGSIHKHNSKSAYDF 179
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
+ +D V+F +S D P+ E E+ FL+ +++ + FV+NK D+ +LE I++ ++
Sbjct: 180 IKESDGVIFALSVDSPINEIEITFLKSVREFAGRFYFVVNKIDVITKQ-DLESYINYCRK 238
Query: 520 NTMKLLNI--ENVTIYPVSARS 539
+L E++ I+PVSA++
Sbjct: 239 LLAGILETTEESINIFPVSAKT 260
>gi|34557720|ref|NP_907535.1| ATP /GTP binding protein [Wolinella succinogenes DSM 1740]
gi|34483437|emb|CAE10435.1| PUTATIVE ATP /GTP BINDING PROTEIN [Wolinella succinogenes]
Length = 677
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS----EEQQRCE 418
EP + I+G++++GKS+ +NA+L K L G+ P T++I LR+ + S E R E
Sbjct: 61 EPMKVAIIGQFSAGKSTFLNAILSKPILPTGITPVTSKICHLRYGEEFSLEVILEDGRTE 120
Query: 419 RH--------------PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
H Q Y P +LKE+ +DTPG N +R ++T E + D
Sbjct: 121 FHKIENLKTIEEDHTRKIKQLTVYAPVELLKEVTFLDTPGFNSQNERDTKVTSEVLEEVD 180
Query: 465 LVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMK 523
++++ D +SE+ L+ + ++ K + VLN+ D + + E+E +S+VK +
Sbjct: 181 GIIWLTLIDNAGKQSELEILQNHLSKYATKSLCVLNQKDKFDSPEEIENTVSYVKNRFGE 240
Query: 524 LLNIENVTIYPVSARSTLEAK 544
+ PVS++ L+AK
Sbjct: 241 FF----AEVIPVSSKLALQAK 257
>gi|268679039|ref|YP_003303470.1| Dynamin family protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617070|gb|ACZ11435.1| Dynamin family protein [Sulfurospirillum deleyianum DSM 6946]
Length = 674
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 26/204 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF--------------- 406
+EP + I G+++SGKS+ +NALL K L G+ P T+++ ++R+
Sbjct: 60 EEPMKVAITGQFSSGKSTFLNALLAKSILPTGITPVTSKVNYIRYGEEFKIRVRYKDGRD 119
Query: 407 -----SDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
S+++ QR + Y P ILK+++ VDTPG N + TE+ +
Sbjct: 120 EYHDISNISHFTDQRGSVEDIAYLVLYAPLNILKDVVFVDTPGLNSQAASDTQTTEKVLK 179
Query: 462 RADLVLFVISADRPLTESEV-VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
D ++++ D SE+ V Y +++ K + VLN+ D + ++EE ++VK
Sbjct: 180 EVDGIIWLTLIDNAGKMSELQVLEEYLGKYQNKSLCVLNQKDKFTKE-QVEETTTYVKSA 238
Query: 521 TMKLLNIENVTIYPVSARSTLEAK 544
K + + P+SAR LE++
Sbjct: 239 FQKFFS----DVIPISARQALESR 258
>gi|297618159|ref|YP_003703318.1| dynamin [Syntrophothermus lipocalidus DSM 12680]
gi|297145996|gb|ADI02753.1| Dynamin family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 577
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 38/212 (17%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------------------ 406
F L I+G+ GKS+++NA+LG+ L V P T+ IT + +
Sbjct: 40 FNLAILGQQKRGKSTLVNAILGQPVLPMAVTPATSVITVVEYGAEPTVTIIHENGLRREV 99
Query: 407 -----SDLASEEQQRCERHPDGQ------YICYLPSPILKEMI-IVDTPGTNVILQRQQR 454
+D +EE R+P+ + +I + PS +L I +VDTPG I + +
Sbjct: 100 TVGELADYITEE-----RNPNNEKQVAIAHITF-PSRLLGRGIRLVDTPGVGSIFEHNTQ 153
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAI 514
++P D LFV S D P+ E+ +LR ++ + FVLNK+D Y + +++ +
Sbjct: 154 TAYGYLPHIDAALFVFSVDTPVAVEEIRYLRDVREQVPMIYFVLNKADFYAD-HDVKRLV 212
Query: 515 SFVKENTMKLLNIENVTIYPVSARSTLEAKLS 546
F + K L ++V +YP+SA LEA+++
Sbjct: 213 DFTRVALEKELG-QSVDVYPLSALMALEAQVA 243
>gi|423456190|ref|ZP_17433043.1| hypothetical protein IEE_04934 [Bacillus cereus BAG5X1-1]
gi|401131610|gb|EJQ39262.1| hypothetical protein IEE_04934 [Bacillus cereus BAG5X1-1]
Length = 636
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 168/355 (47%), Gaps = 79/355 (22%)
Query: 338 IDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPT 397
+D ++ L+++V ++E F++V+VGE++ GKS+ IN+ LGKR L V PT
Sbjct: 32 VDYVRTMEKLIQDV---------MNEEFVIVVVGEFSRGKSTFINSFLGKRILPSSVKPT 82
Query: 398 T---NEITF-------LRFSDLASEEQQRCERHPDGQYICYLPSPILKE----------- 436
T N+IT+ L + D +E+ R + + I PI+ +
Sbjct: 83 TTILNKITYKEHPNITLHYRD--EKEKSRAISEEEFKKIVAPREPIVGDEQSEKEYEEAL 140
Query: 437 ---------------------MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
+ I+DTPGTN + + ++ +T F+P +D + ++S +
Sbjct: 141 KKISEVAYAEVGYPLSFCSDGVEIIDTPGTNDLDEAREEITNTFIPTSDAAILLLSGVKI 200
Query: 476 LTESEVVFL--RYTQQWKKKVVFVLNKSDLYQNAFELEEAI----SFVKENTMKLLNIEN 529
L+ESE+ FL R Q +KV FV+N +++A + EE I S+ +E K+ +EN
Sbjct: 201 LSESEMSFLRDRILSQDIQKVFFVIN----FKDALD-EEGIKKVYSYAQEKLSKV--VEN 253
Query: 530 VTIYPVSARSTLEAKLSVSSAVGKDHSE-LSVNDSHWRINTFDKLEKLLYSFLDGSSSTG 588
I+ VSA+ L + + + + + ++ +LE+ L FL
Sbjct: 254 PRIFFVSAKHALAYRRKQNGETIRMRGPIMDIEET-----GIPQLEQELAHFLQ------ 302
Query: 589 KERMRLKLETPIRIAERLLS-SCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKM 642
ER +KL+ PI+ A+RL + + + + D + D+ ++ ++ L+E + ++
Sbjct: 303 YERGMIKLQKPIQTAKRLANKTLQEQITFDKKSLNNDIKDLDKKLEKLREQISEL 357
>gi|379011419|ref|YP_005269231.1| hypothetical protein Awo_c15600 [Acetobacterium woodii DSM 1030]
gi|375302208|gb|AFA48342.1| hypothetical protein Awo_c15600 [Acetobacterium woodii DSM 1030]
Length = 559
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 127/239 (53%), Gaps = 31/239 (12%)
Query: 349 EEVSLLIDAVSQIDEPFLLV-IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+E+ +++ ++I+ L++ ++G++ GK+S+INALLG L GV+P T+ T +++
Sbjct: 25 DEIKKVVEIRNKIENNELVISVIGQFKRGKTSLINALLGADVLPIGVIPVTSVATKIQYG 84
Query: 408 DLA-------SEEQQRC----------ERHPDGQ----YI-CYLPSPILKE-MIIVDTPG 444
+ E+++ C + +P+ Q ++ YLP L+ +++VDTPG
Sbjct: 85 EEGVMVHFKNGEKERICLNDLIRFVAEQENPNNQKGVSFVNLYLPFDFLRNGLVLVDTPG 144
Query: 445 TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+ Q F+ ++D ++F++S D P+ E E FL ++++ K F +NK D
Sbjct: 145 VGSVHQNNTDEAYAFMKKSDAIIFMLSVDSPINEIEYEFLVSSKKYASKFYFTVNKIDTI 204
Query: 505 QNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDS 563
+ +L +++ + ++++ E + ++P+SA++ K ++ +G H E + DS
Sbjct: 205 -SCDDLNAYLNYCRNILREIMSAETIALFPISAKT----KSGMNELLG--HIEEDIQDS 256
>gi|88602385|ref|YP_502563.1| dynamin [Methanospirillum hungatei JF-1]
gi|88187847|gb|ABD40844.1| Dynamin [Methanospirillum hungatei JF-1]
Length = 588
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 44/219 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVP---------------------------- 396
F L I+G++ GKS+ +NALLG L V+P
Sbjct: 45 FHLAILGQFKRGKSTFLNALLGDAVLPSSVIPLTAVPTLITYNQEKNVRVKYINGKDDGV 104
Query: 397 -TTNEITFLR--FSDLASEEQQRCERHPDGQYICYLPSPIL-KEMIIVDTPGTNVILQRQ 452
T+++ T +R SEE + Q P+ IL K ++++DTPG +
Sbjct: 105 FTSDDTTLIRKFVEAYVSEESNPKNKLQVLQVELTWPAEILAKGVVLIDTPGVGSTHKHN 164
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEE 512
+T F+ + D LF++S+D P+TE E+ FL ++ F+LNK D Y N EE
Sbjct: 165 TEMTVNFLSQCDAALFLVSSDPPITEIELEFLHQITDAIPRIFFLLNKID-YLN----EE 219
Query: 513 AISFVKENTMKLLNIE------NVTIYPVSARSTLEAKL 545
I+ V E K+L IE +V IYPVSA+ L A++
Sbjct: 220 DIAVVSEFIRKIL-IEKGSISGDVQIYPVSAKQGLTARM 257
>gi|410723778|ref|ZP_11363000.1| Fe2+ transport system protein B [Clostridium sp. Maddingley
MBC34-26]
gi|410602780|gb|EKQ57237.1| Fe2+ transport system protein B [Clostridium sp. Maddingley
MBC34-26]
Length = 631
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 52/287 (18%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS---------- 411
D+ F +V+VGE++ GKS+ INALLGKR PTT + + +S++ S
Sbjct: 48 DDKFKIVVVGEFSRGKSTFINALLGKRIFPAATKPTTTILNKISYSEIPSYKVVFKDNEN 107
Query: 412 ----------------------EEQQRCERHPDGQYICYL-------PSPILKEMI-IVD 441
+EQ + + I + P+ + K I IVD
Sbjct: 108 SFRNITEDEFKKIVAPKEPIIDDEQSELDYENALREISKISYADIGYPTELCKGGIEIVD 167
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLN 499
TPGTN + ++ +T F+P +D+ + ++SA++ L +SE+ FL R + +K+ FV+N
Sbjct: 168 TPGTNDLDAAREEITYRFIPESDVAIMLLSANQALADSEMHFLKDRILKADIQKIYFVIN 227
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELS 559
D ++ + + I +V+E+ ++N N ++ VS++ L + S ++ K E+
Sbjct: 228 FKDRIRDERDQLKIIDYVREHLEPVIN--NPKVFMVSSKGALTFRRSFNNEEVK--GEIP 283
Query: 560 VNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERL 606
+S F +LE+ + FL S+ G ++ +E IRI+ L
Sbjct: 284 TIES----TGFVELEENMSEFL--SNERGNIKLSKYIERGIRISSDL 324
>gi|373494416|ref|ZP_09585021.1| hypothetical protein HMPREF0380_00659 [Eubacterium infirmum F0142]
gi|371968913|gb|EHO86367.1| hypothetical protein HMPREF0380_00659 [Eubacterium infirmum F0142]
Length = 424
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 41/259 (15%)
Query: 335 LEAIDVI---KKASPLM-----------EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
+EAID++ K+A L + LL+D +S + + ++G++ GKS++
Sbjct: 6 VEAIDILELAKEADELFSGGEAACSIQRRQCKLLVDKLS--NSNMTISVIGQFKRGKSTL 63
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFS-------------------DLA---SEEQQRCE 418
N +LGK Y+ G+VP T+ +T + + DL+ SE++
Sbjct: 64 SNCILGKNYMPVGIVPITSAVTKVVYGRQSAEVCFENGEVRPVEIDDLSAYISEQENAQN 123
Query: 419 RHPDGQYICYLPSPILKEMII-VDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLT 477
+ + + + S LK I VDTPG + + +++ +D V+F++S D P+
Sbjct: 124 KLGVKEVVIHSESDFLKNGITYVDTPGVGSFHKNNTEVAYDYMKESDAVIFLLSVDSPIN 183
Query: 478 ESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
+ E+ FL+ T+++ K F +NK D +A +LE + +++ + + PVSA
Sbjct: 184 QIEIDFLQSTKEYAGKFYFAVNKIDTV-SAGDLEAYTGYCAGLLSEIMETSAIKLMPVSA 242
Query: 538 RSTLEAKLSVSSAVGKDHS 556
+ T E ++ SA+ +D S
Sbjct: 243 K-TGEGVEALKSAILRDLS 260
>gi|427720563|ref|YP_007068557.1| dynamin family protein [Calothrix sp. PCC 7507]
gi|427352999|gb|AFY35723.1| Dynamin family protein [Calothrix sp. PCC 7507]
Length = 605
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 47/253 (18%)
Query: 347 LMEEVSLLIDAV-SQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR 405
L+ ++ I+ + +++D F+LVI+G++ GKS++INALLG+ + V P T I ++
Sbjct: 43 LIRQIQTQINQIRTRLDADFVLVIIGDFKRGKSTLINALLGESVVTTDVTPETVTINHIQ 102
Query: 406 FSDLASEEQQRCERHPDGQY----------------------ICYL----PSPILKEMII 439
+ SE + GQ+ + +L P L+ + +
Sbjct: 103 Y---GSEAKISVCLTDGGQFQLEKEELKSEELELVLANSPQPVSHLRIETPHEWLRGIRL 159
Query: 440 VDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT--QQWKKKVVFV 497
VDTPGT IL+R R ++ +AD V+FV+SA P E+E+ FL+ + Q KV FV
Sbjct: 160 VDTPGTGDILKRFDRQVHTYLLQADAVIFVVSALAPFAENELAFLQMSVIPQDFPKVFFV 219
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLLNI-ENVTIYPVSA-----------RSTLEAKL 545
LN D N +EA+ N K+ + N ++ +SA R L+AK+
Sbjct: 220 LNMMD---NIRTEQEAVRLFNSNYQKISRLFPNPQLFSISAFDEFCRLQSLSRPNLDAKV 276
Query: 546 SVSSAVGKDHSEL 558
+ ++ + + L
Sbjct: 277 RLETSFNEFRTSL 289
>gi|357031970|ref|ZP_09093910.1| hypothetical protein GMO_16110 [Gluconobacter morbifer G707]
gi|356414197|gb|EHH67844.1| hypothetical protein GMO_16110 [Gluconobacter morbifer G707]
Length = 388
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F + +VG Y+ GKS+++NAL G L G P T+ IT LR+
Sbjct: 42 FNVAVVGRYSRGKSTLLNALTGLDRLPMGAEPLTSVITSLRYGTEEKAIVHFQATSLTED 101
Query: 408 -------DLASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEF 459
D +E R + L SPILK +DTPG I+ T EF
Sbjct: 102 IPLSVIKDYVTEHGNHANRRRIQEVEIILQSPILKSGFRFIDTPGIGSIIHANTETTLEF 161
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA---ISF 516
+ D+ +FV + D PL E LR K + VLNK+DL + L+ +
Sbjct: 162 LSEIDVFVFVTACDSPLGSDENSLLREIASIHKPLFPVLNKADLASDLDLLQRSEVLHEI 221
Query: 517 VKENTMKLLNIENVTIYPVSARSTLEAKLS 546
++EN + ++N I+ +SA LEA+LS
Sbjct: 222 LRENGL----MKNDQIFCLSAVQALEARLS 247
>gi|296274194|ref|YP_003656825.1| dynamin family protein [Arcobacter nitrofigilis DSM 7299]
gi|296098368|gb|ADG94318.1| Dynamin family protein [Arcobacter nitrofigilis DSM 7299]
Length = 671
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 37/276 (13%)
Query: 304 SNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDE 363
S+ FF KE V E L+ + V L+ +D +K P + S+L + +
Sbjct: 12 SDKFFEKEEVF--------ETGLVGDIKRVSLKLMD--EKFHPSFQLKSILDKQLRRARY 61
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD--------------- 408
P + I G+++SGKS+ +NALL K L G+ P T+++ FL + +
Sbjct: 62 PMEVAITGQFSSGKSTFLNALLSKNILPTGITPVTSKVNFLNYGEEYKLKITYYSGAQEY 121
Query: 409 -----LASEEQQRCERHPDGQYIC-YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
+A QR + +Y+ Y P ILK++ VDTPG N Q T + +
Sbjct: 122 APIEAIADFTDQRKSEMSEIKYLTLYAPMDILKDISFVDTPGLNSQSQSDTDTTRKVLRD 181
Query: 463 ADLVLFVISADRPLTESEV-VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENT 521
++++ D +SE V Y +Q+K K + VLN+ D + ++E +V E
Sbjct: 182 VGGIIWLTLIDNAGKKSEAEVLEEYMEQFKNKSLCVLNQKDKFTEE-QIETTTKYVSEKF 240
Query: 522 MKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSE 557
K + P+SA+ L+A+ + D E
Sbjct: 241 SKYF----AQVTPISAKMALQARAHDKDVLMNDEYE 272
>gi|303231645|ref|ZP_07318368.1| dynamin family protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513594|gb|EFL55613.1| dynamin family protein [Veillonella atypica ACS-049-V-Sch6]
Length = 615
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 38/267 (14%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT----------FLRFSDLAS 411
D+ F LV+VG ++ GKS+ ++ALLGKR L PTT I+ FL + D ++
Sbjct: 44 DDHFQLVVVGMFSRGKSTFVDALLGKRLLPTSKKPTTAVISKITYGEKPAFFLHYKDESA 103
Query: 412 EEQQRCERH----------PDG-----QYICY----LPSPILKEMI-IVDTPGTNVILQR 451
++ E DG I Y P + + +VDTPGTN + Q
Sbjct: 104 SQELSEESFFNLTASNTEGDDGAEEEVDRISYAEVRYPLTFCQHGVELVDTPGTNDLNQA 163
Query: 452 QQRLTEEFVPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLNKSDLYQNAFE 509
+ +T +++ +AD V+ +++AD+ L+ EV FL R + + F++N+ D E
Sbjct: 164 RVEITYQYLNKADAVIMLLAADQALSIGEVEFLKERIIKNQISDIFFIINRKDTLSGPEE 223
Query: 510 LEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHS---ELSVNDSHWR 566
+ FVK+N +++ ++ + S+ +A LS A G+ S ++ + +S
Sbjct: 224 EARVLEFVKDNLTQIVGVDFAEKLHIHLVSSYQALLSRRHANGESLSVKQQMKIPES-IE 282
Query: 567 INTFDKLEKLLYSFLDGSSSTGKERMR 593
I F E+ L FL+ GK ++R
Sbjct: 283 ITGFPAFEEDLAQFLELEK--GKVKLR 307
>gi|410723780|ref|ZP_11363002.1| dynamin family protein [Clostridium sp. Maddingley MBC34-26]
gi|410602782|gb|EKQ57239.1| dynamin family protein [Clostridium sp. Maddingley MBC34-26]
Length = 596
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 51/330 (15%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-------------- 407
+E + +VI+GE+ GKS+ +N+LLG+ L V PTT I + +
Sbjct: 44 NEFYTVVILGEFKRGKSTFVNSLLGENILPVDVTPTTATINAILWDNEKYMSVYKTDGSV 103
Query: 408 DLASEEQQRCERHPDG--------QYICY-LPSPILK-EMIIVDTPGTNVILQRQQRLTE 457
D + + + + G QYI + + ILK ++++VDTPG + + Q++ +T
Sbjct: 104 DTLELKNENLKNYVAGAEFDPASIQYIKLGMSANILKNKVVLVDTPGVDDLNQQRVDITY 163
Query: 458 EFVPRADLVLFVISADRPL--TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
+F+PRAD VLF++ A P+ TE E + K+VF+ N D Q E E
Sbjct: 164 KFIPRADAVLFLLDATNPVRRTEKEFIEDNLLSNGIDKIVFIANFFD--QIDEEEAEDAI 221
Query: 516 FVKENTMK-LLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
N ++ L ++V ++ +SAR L+AK V +D+ L ++ K+E
Sbjct: 222 EDISNRLRNALGDKDVQLFGLSARQALDAK------VNEDNELLE-------MSGLSKVE 268
Query: 575 KLLYSFLDGSSSTGKERMRLK--LETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMI 632
L ++ + T ++ +R K L + ER L+S L + +L +++I
Sbjct: 269 NALTKIIESGTQTEEKMVRYKKRLLMILNALERELNSLIHLEGSSIKYLDNELKSISQLI 328
Query: 633 D-------SLKEYVMKMESESISWRRKTLS 655
SL EYV + E+E ++ RK+++
Sbjct: 329 KEEEKRKASLDEYVRRQENEMLAIVRKSVN 358
>gi|325681040|ref|ZP_08160572.1| conserved domain protein [Ruminococcus albus 8]
gi|324107269|gb|EGC01553.1| conserved domain protein [Ruminococcus albus 8]
Length = 590
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 28/161 (17%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVP---TTNEITF- 403
++E L+D + +EPF LVI+GE+ GKS++INALLGK+ V P T NEI+F
Sbjct: 42 LKEFRALVD--KRCEEPFTLVILGEFKRGKSTIINALLGKKLAPINVTPETYTINEISFG 99
Query: 404 ----------------LRFSDLASEE-QQRCERHPDGQYICYL---PSPILKEMIIVDTP 443
L D+ E ++R + P + C +PILK + IVDTP
Sbjct: 100 HTQTVEAILENGQRVPLVLEDITRENLEKRMKLFP-AKISCVQIKDNAPILKNIRIVDTP 158
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
G + L+ + +E++ AD +++ S P +E+E VFL
Sbjct: 159 GLSD-LESLDKQVQEYIVNADAIMYAASCLLPFSETEQVFL 198
>gi|307154221|ref|YP_003889605.1| dynamin family protein [Cyanothece sp. PCC 7822]
gi|306984449|gb|ADN16330.1| Dynamin family protein [Cyanothece sp. PCC 7822]
Length = 675
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 155/377 (41%), Gaps = 90/377 (23%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKR------------------YLKDGVVP---------T 397
+V+ GE+ GKSS+INA L ++ Y K+ + T
Sbjct: 46 LFVVVCGEFKQGKSSLINAFLNEKDLFPVDTDITTNLVSTITYGKEEKISIILGEQGNET 105
Query: 398 TNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLT 456
+I+ D +E++ + P+P LKE +++VDTPG + +T
Sbjct: 106 VKQISRNEIPDYVTEQRNIRNAKKAKMLVIESPNPQLKEGLVLVDTPGVGSLNTEHTAIT 165
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLR-----YTQQWKKKVVFVLNKSDLYQNAFELE 511
F+P AD +LFV +PLT E+ FL+ + Q ++FV+ K D N E+
Sbjct: 166 YAFIPNADAILFVTDILKPLTTEELQFLKERIFPHCQ----NIIFVVTKIDAVNNFQEI- 220
Query: 512 EAISFVKENTMKLLNI-----ENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWR 566
V+ N KL + E ++I P+S+R AKL K+ ELS
Sbjct: 221 -----VENNLEKLTKVLDCSREQISIIPISSR----AKLDYLKFKEKEDLELS------- 264
Query: 567 INTFDKLEKLLYSFLDGSSSTG--------KERMRLKLETPIRIA-----ERLLSSCETL 613
F +LE ++ F+ G E+ +++ PI +A R + L
Sbjct: 265 --NFSELENKIWQFISEQRGQGLLLRALNELEQSVNEMKAPIEVAVEAHQNRTKEELDEL 322
Query: 614 --VMKDCQDAKQDL-----TLANEMIDSL----KEYVMKMESESISWRRKTLSLIDSTK- 661
MKD Q+ QDL N + DSL +E ++K + R +T +D +
Sbjct: 323 EQQMKDTQEQLQDLLDSKAEWRNILTDSLEDIKQELLVKFQQNFSQIRSQTTKYLDDPRL 382
Query: 662 ----SRVVKLIESTLQI 674
++ L+E+ + +
Sbjct: 383 MKNPKQIASLVETDIDV 399
>gi|237752741|ref|ZP_04583221.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376230|gb|EEO26321.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 672
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 35/254 (13%)
Query: 360 QIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----------- 408
+I EP + I+G+++SGKS+ +NALLG+ L G+ P T+++ + + +
Sbjct: 49 KITEPMQIAIIGQFSSGKSTFLNALLGQDILPTGITPITSKVCKICYGEDYILEILYKDG 108
Query: 409 ---LASEE---QQRCERHPDGQYIC-YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
L + E + E + Y C Y P +LKE+ +DTPG N +T + +
Sbjct: 109 SKVLQNVEFLHKLTRENSKNIDYFCLYAPILLLKEINFLDTPGFNSQNSDDTHITLKMLD 168
Query: 462 RADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
+ D ++++ D SE + L+ ++ + +K + VLN+ D +N E++ ++ + K
Sbjct: 169 QVDGIIWLTLIDNAGKNSEKILLKEFSSHFSQKSLCVLNQKDRLKNEKEIQTSVEYAKAA 228
Query: 521 TMKLLNIENVTIYPVSARSTLEA------KLSVSSAVGKDHS----ELSVNDSHWRINTF 570
+ + P+SAR L+A K ++ + HS L NDS+ +N+
Sbjct: 229 FEGIF----ANVIPISARLALKARSNTAEKFLETTLLSLAHSIQDIALKRNDSN--LNSK 282
Query: 571 DKLEKLLYSFLDGS 584
+ L+KL ++D S
Sbjct: 283 ESLQKLKELYIDTS 296
>gi|384171255|ref|YP_005552632.1| ATP/GTP-binding protein [Arcobacter sp. L]
gi|345470865|dbj|BAK72315.1| ATP/GTP-binding protein [Arcobacter sp. L]
Length = 674
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 41/260 (15%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD--------------- 408
P + I G++++GKS+ +NALL + L G+ P T+++ F+ + +
Sbjct: 66 PMEVAITGQFSAGKSTFLNALLSRNILPTGITPVTSKVNFINYGEEYKLKITYYSGAQEF 125
Query: 409 -----LASEEQQRCERHPDGQYIC-YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
+A QR D +Y+ Y P ILK++ VDTPG N Q T + +
Sbjct: 126 APIESIADFTDQRQHEMKDIKYLTLYAPMDILKDISFVDTPGLNSQSQSDTETTRKVLRD 185
Query: 463 ADLVLFVISADRP--LTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
++++ D L+E+EV+ Y Q +K K + VLN+ D ++E +V +
Sbjct: 186 VGGIIWLTLIDNAGKLSEAEVL-EEYMQHFKNKSLCVLNQKDKLTPE-QVETTTKYVSDK 243
Query: 521 TMKLLNIENVTIYPVSARSTLEAK------------LSVSSAVGKDHSELSVNDSHWRIN 568
K + P+SAR LE++ + + KD E +V+D + N
Sbjct: 244 FSKFF----AKVVPISARMALESRAQQKDILIEDEYTKIVTQFKKDLLEKNVDDLDFFEN 299
Query: 569 TFDKLEKLLYSFLDGSSSTG 588
+F + ++S + ++T
Sbjct: 300 SFKDYKNKIHSIQNSDATTN 319
>gi|258515416|ref|YP_003191638.1| dynamin family protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779121|gb|ACV63015.1| dynamin family protein [Desulfotomaculum acetoxidans DSM 771]
Length = 506
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 155/332 (46%), Gaps = 40/332 (12%)
Query: 413 EQQRCERHPDGQYICY-LPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI 470
E++ E +Y+ PS LK+ +I++DTPG I + T ++P+ D +F+I
Sbjct: 32 EEKNPENEKQVRYVTVTYPSDYLKDGLILIDTPGVGSIYRNNDDETYSYLPKMDAAIFLI 91
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENV 530
S D P++ +E+ FL+ Q+ K F+LNK D Y + +EEA+ F ++ +N
Sbjct: 92 SVDPPISRAEIEFLQAINQYSAKTFFILNKID-YLDDSGVEEALRFSEKVLSSHAKFDNP 150
Query: 531 TIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKE 590
I P+SA+ LE ++ K E+ R+ F+ ++L FL
Sbjct: 151 VICPLSAKFALEGRI-------KGDEEML---EKSRLPQFN---QILRDFL--------- 188
Query: 591 RMRLKLETPIRIA-ERLLSSCETLVMKDCQDAKQDLTLANEM---IDSLKEYVMKMESES 646
M+ K T I + + L++ L M + K T +E+ ID + ++KM E
Sbjct: 189 -MKEKGNTIIGVGVTKALNAVSELSMGINLEVKALNTPVHELLEKIDLFDQAILKMHQE- 246
Query: 647 ISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIVASY---VFRGEKSAAMPSTSRIQHDI 703
++ + ++D ++++ +E+ + + + + + + R + S+ R+ I
Sbjct: 247 ---QQDNMYILDGEIKKLLQELEAIINLYKEERIRFFDKEIERLNQEYKDLSSRRLMEQI 303
Query: 704 IGPALLDTQKLLGEYTMWLQSKNAREGRRYKE 735
G ++T+K+L + WL A R+Y++
Sbjct: 304 TGYVNMETEKILNQ---WLPEVEAEVIRKYEK 332
>gi|303231626|ref|ZP_07318349.1| dynamin family protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513575|gb|EFL55594.1| dynamin family protein [Veillonella atypica ACS-049-V-Sch6]
Length = 597
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 51/254 (20%)
Query: 339 DVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT 398
+ + + + L+E+V+ L + + Q + + ++++GE+ GKS+++NALLG+ L ++P T
Sbjct: 18 NYVSQHTDLLEKVTALEEDIRQ--DRYKILVLGEFKRGKSTLVNALLGRSILPMDILPET 75
Query: 399 ---NEITF-------------------------LRFSDLASEEQQRCERHPDGQYICYLP 430
NE+ + RFS A Q Y P
Sbjct: 76 ATLNEVVYSEKPFVKVFYSNSLVEDGSLTPEFLKRFSANAENSQAHLVDKIQMGY----P 131
Query: 431 SPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR--YT 487
P L+ +I+VDTPG + + + +T + +P A+ V+F++ A+ PLT+SE FL
Sbjct: 132 LPFLENNIILVDTPGVADLDETRCDVTYKILPEANAVIFLLDANTPLTQSERDFLVDCLL 191
Query: 488 QQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNI----------ENVTIYPVSA 537
Q ++F+LNK D + EE F+++ +L +I N+ I P+SA
Sbjct: 192 PQGVDNILFLLNKYDF----IDEEEDEGFLEDVEDRLRSILTGDEGQELFSNIHILPISA 247
Query: 538 RSTLEAKLSVSSAV 551
+ LE L ++A+
Sbjct: 248 KMALEGYLYENNAL 261
>gi|160902955|ref|YP_001568536.1| HSR1-like GTP-binding protein [Petrotoga mobilis SJ95]
gi|160360599|gb|ABX32213.1| GTP-binding protein HSR1-related [Petrotoga mobilis SJ95]
Length = 523
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 128/237 (54%), Gaps = 29/237 (12%)
Query: 318 KFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAV-SQIDEPFLLVIVGEYNSG 376
KF+ E +L +++L + +++I S L+++ ID V S+ + F V+VG+ +G
Sbjct: 9 KFKKEESKL----KALLKDYLELINGNSFLIKDK---IDEVKSEFETLFNFVVVGKVKAG 61
Query: 377 KSSVINALLGKRYLKDGVV-----PTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPS 431
KSS +NALLG + ++ + P T++IT +R + Q E D I Y
Sbjct: 62 KSSFLNALLGIKEGEESIFEVGPGPQTSKITIVR------KGQGNVETKGDMVTI-YKDL 114
Query: 432 PILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQW 490
L+ + I+DTPGT+ I+++ +++T +F+ ++L++FV + T+S+ + + +
Sbjct: 115 DSLEGIEIIDTPGTDTIMEKHEKITRDFLENSNLIMFVFDSKNIYTKSDWELIEKIIKDL 174
Query: 491 KKKVVFVLNKSDLYQNAFELEEAISFVKE---NTMKLLNIENVTIYPVSARSTLEAK 544
KK V+F+L++ D +E I K+ N +++++ I+ SA+ +E+K
Sbjct: 175 KKDVIFILSQKDRAS-----QEEIEMAKKELINRCNKIDLKDPKIFLTSAKLEIESK 226
>gi|168333742|ref|ZP_02691992.1| hypothetical protein Epulo_02526 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 920
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF---------------------- 403
L++++GE+ +GKSS+INALLG+ LK V PTT IT
Sbjct: 702 LVLVMGEFKTGKSSLINALLGEPILKSAVTPTTAIITLISYGVTRRVLATFVDKTVREFS 761
Query: 404 -LRFSDLASEEQQRCERHPDGQYI-CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
L F L +E + Q + ++ P+L+ + +VDTPG NV +T++FV
Sbjct: 762 ELDFHALTAEGDEGVALRKIIQTVEIFVDHPLLRNITLVDTPGLNVDNANHISITKKFVK 821
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD +++V+ A R + +EV R + K V+N+ D
Sbjct: 822 NADAIVWVLGAARGASRTEV---RAIRNLHIKPTIVVNRID 859
>gi|383829644|ref|ZP_09984733.1| dynamin family protein [Saccharomonospora xinjiangensis XJ-54]
gi|383462297|gb|EID54387.1| dynamin family protein [Saccharomonospora xinjiangensis XJ-54]
Length = 644
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 40/204 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQR------- 416
+V+VGE N GKSS++NALL + G+ P E+ T+L F + ASE Q +
Sbjct: 78 VVVVGETNRGKSSLVNALLAQ----PGLSPVEAEVATATYLVF-EHASEWQAKACYPGQL 132
Query: 417 --------------CERH--PDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRL 455
C RH P+GQ Y+ P P+L+ + +VDTPG + L
Sbjct: 133 APVGFELEELERWVCARHELPEGQLPPRYVEVSGPVPLLERISVVDTPGVGGLDSAHGEL 192
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-I 514
E A +LFV+ A P T E+ FL + V+FVL+K+D ++ ++ +A
Sbjct: 193 AMEAAAGATALLFVVDASAPFTAPELRFLTAMADRVETVLFVLSKTDQFRGWRQILDADR 252
Query: 515 SFVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + I+PVSAR
Sbjct: 253 ELLAEHAPRF---ADAPIHPVSAR 273
>gi|313143620|ref|ZP_07805813.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128651|gb|EFR46268.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|396077937|dbj|BAM31313.1| putative ATP/GTP binding protein [Helicobacter cinaedi ATCC
BAA-847]
Length = 631
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 340 VIKKASPLMEEVSLLIDAVSQ-IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT 398
+I++ PL +S ++ ++Q I EP + I+G+++SGKS+ +NALLG+ L G+ P T
Sbjct: 50 MIQQMMPLSSRISTILKNLTQSIQEPMKIAIIGQFSSGKSTFLNALLGQEILPSGITPIT 109
Query: 399 NEITFLRF-SDLASEEQQR-----------------CERHPDGQYICYLPSPILKEMIIV 440
+I + + +D A E + E Y Y P +LK M +
Sbjct: 110 AKICHIVYGNDYALELHYKNGNIATKPLYYMNEVSVAENAKIAFYKLYAPLELLKTMSFL 169
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLN 499
DTPG N Q T + D ++++ D +SE + + +++ K + VLN
Sbjct: 170 DTPGFNSQNQSDTDTTNAVLESVDGIIWLTLIDNVGKQSEKEIINAHIRRYVSKSLCVLN 229
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEA 543
+ D +N E+ ++ + K+ L I +SA++ L++
Sbjct: 230 QKDRLKNEDEINTSLEYAKKAFSGLFG----DIIAISAKNALQS 269
>gi|338811390|ref|ZP_08623607.1| Dynamin family protein [Acetonema longum DSM 6540]
gi|337276633|gb|EGO65053.1| Dynamin family protein [Acetonema longum DSM 6540]
Length = 909
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 49/268 (18%)
Query: 319 FEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
F D +L++ R +LL + K S + V +D P L+ + GE+NSGKS
Sbjct: 75 FLDVSGKLLQDVRKILLRLDERWPKISYAAKPVQAFLDMYH---APPLITVAGEFNSGKS 131
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICY---------- 428
++INA+LG++ + P +T L++S+ ++ RH +G++ Y
Sbjct: 132 TLINAMLGEKLQAMQIRPKLGCVTRLKYSN----RRRIIIRHMNGEFREYELQPLRTVLV 187
Query: 429 -------------------LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
L + +LK+ IVDTPG N +R +T EF+ AD++++V
Sbjct: 188 ENFVHEDDIMHDVFYVQVELENSLLKQFDIVDTPGFNSGFRRHNDMTAEFIGYADVLIWV 247
Query: 470 ISADRPLTESEV-VFLRYTQQWKKKVVF-VLNKSDLYQNAFE---LEEAISFVKENTMKL 524
A+R + ++ +F ++TQ + VV +++K L ++ +E+ ++ V +N +
Sbjct: 248 FDAERLANQPDLELFHQHTQHCQTLVVVNMVDKLKLPKHRTPESVMEQFVAEVGKNVDQ- 306
Query: 525 LNIENVTIYPVSARSTLEAKLSVSSAVG 552
IY V+ARS L ++ G
Sbjct: 307 -------IYFVTARSALAGEVGSLEGSG 327
>gi|386760873|ref|YP_006234508.1| ATP/GTP binding protein [Helicobacter cinaedi PAGU611]
gi|385145889|dbj|BAM11397.1| putative ATP/GTP binding protein [Helicobacter cinaedi PAGU611]
Length = 631
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 340 VIKKASPLMEEVSLLIDAVSQ-IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT 398
+I++ PL +S ++ ++Q I EP + I+G+++SGKS+ +NALLG+ L G+ P T
Sbjct: 50 MIQQMMPLSSRISTILKNLTQSIQEPMKIAIIGQFSSGKSTFLNALLGQEILPSGITPIT 109
Query: 399 NEITFLRF-SDLASEEQQR-----------------CERHPDGQYICYLPSPILKEMIIV 440
+I + + +D A E + E Y Y P +LK M +
Sbjct: 110 AKICRIVYGNDYALELHYKNGNIATKPLYYMNEVSVAENAKIAFYKLYAPLELLKTMSFL 169
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLN 499
DTPG N Q T + D ++++ D +SE + + +++ K + VLN
Sbjct: 170 DTPGFNSQNQSDTDTTNAVLESVDGIIWLTLIDNVGKQSEKEIINAHIRRYASKSLCVLN 229
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEA 543
+ D +N E+ ++ + K+ L I +SA++ L++
Sbjct: 230 QKDRLKNEDEINTSLEYAKKAFSGLFG----DIIAISAKNALQS 269
>gi|423456191|ref|ZP_17433044.1| small GTP-binding protein domain protein [Bacillus cereus BAG5X1-1]
gi|401131611|gb|EJQ39263.1| small GTP-binding protein domain protein [Bacillus cereus BAG5X1-1]
Length = 967
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 37/233 (15%)
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL----ASEEQ 414
S I+ +++I GE+N+GKS+ INALLG+ L + P T +T L++ ++ A +
Sbjct: 41 SDINSNPIIMIAGEFNAGKSTFINALLGEEILTSEITPATAVVTVLKYGEVRGITAYFKN 100
Query: 415 QRC-------------ERHPDGQYI--------CYLPSPILKEMIIVDTPGTNVILQRQQ 453
C E +G +I LPS ILK++ +VDTPG N
Sbjct: 101 GDCKTYSIEKLATISSEGEQNGAFIRKSLNFLEITLPSEILKQVTLVDTPGLNSSNLLHT 160
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
TE F+ RADL +++ S + +E+ + + + + ++N+ D + + E E
Sbjct: 161 EATEMFMRRADLAIWLFSYLNVGSSTEINQINKLKDYGLQTTGIINQIDHHDD--EEEPL 218
Query: 514 ISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWR 566
F+ + +L ++N+ VSAR+ L+ K+ + +N S+WR
Sbjct: 219 EDFIMDTKRRLPMLQNLI--GVSARNALKGKVENDAE--------QMNWSNWR 261
>gi|317055199|ref|YP_004103666.1| hypothetical protein Rumal_0479 [Ruminococcus albus 7]
gi|315447468|gb|ADU21032.1| hypothetical protein Rumal_0479 [Ruminococcus albus 7]
Length = 590
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 28/161 (17%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVP---TTNEITF- 403
++E L+D + +EPF LVI+G++ GKS++INALLGK+ V P T NEI+F
Sbjct: 42 LKEFRALVD--KRREEPFTLVILGDFKRGKSTIINALLGKKIAPINVTPETYTINEISFG 99
Query: 404 ----------------LRFSDLASEE-QQRCERHPDGQYICYL---PSPILKEMIIVDTP 443
L D+ E ++R + P + C +PILK + IVDTP
Sbjct: 100 HTQTVEAILENGQRVPLVLEDITRENLEKRMKLFP-AKISCVQIKDNAPILKNIRIVDTP 158
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
G + L+ + ++++ AD +++ S P +ESE VFL
Sbjct: 159 GLSD-LESLDKQVQDYIVNADAIMYAASCLLPFSESEQVFL 198
>gi|297616664|ref|YP_003701823.1| dynamin [Syntrophothermus lipocalidus DSM 12680]
gi|297144501|gb|ADI01258.1| Dynamin family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 573
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 37/213 (17%)
Query: 323 EKQLIETERSVLLEAIDVIKK--ASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
EK+L+E R +L E K S L + V + + Q ++ + ++G + +GKSS
Sbjct: 4 EKKLLEEARKILDEVESACKDFGLSSLKKTVKSIQNFTEQ-NQYLDVAVLGSFKAGKSSF 62
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFS-----------------------DLASEEQQRC 417
+N+L+G+ L G +P T+ IT +R+ D SE
Sbjct: 63 LNSLIGRPILPVGNIPVTSVITRIRYGRQEKVTVSFLDGTSREIPIDEIQDFVSESG--- 119
Query: 418 ERHPDGQYICY---LPSPIL---KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVIS 471
+P + + + P L K + +VDTPG + Q T + P VLF+IS
Sbjct: 120 --NPGNERDVFSVDIEVPTLEDFKAIRLVDTPGIGSVWQHNTETTTGWFPETGGVLFLIS 177
Query: 472 ADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
A+RP++ESE+ FL+ T + ++ V+ K DL+
Sbjct: 178 AERPISESELNFLKETYLYTPEIAVVITKVDLF 210
>gi|32266605|ref|NP_860637.1| hypothetical protein HH1106 [Helicobacter hepaticus ATCC 51449]
gi|32262656|gb|AAP77703.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 614
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 341 IKKASPLMEEVSLLIDAVSQ-IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
+ + +PL + + +++Q I EP + I+G+++SGKS+ +NALLGK L G+ P T
Sbjct: 46 LSQIAPLDSRATHTLQSLTQSIQEPMKVAIIGQFSSGKSTFLNALLGKNILPSGITPITA 105
Query: 400 EITFLRF-SDLASE-----------------EQQRCERHPDGQYICYLPSPILKEMIIVD 441
+I + + D A E E + Y Y P +LK++ +D
Sbjct: 106 KICHIVYGQDYALEIHYKNGNTATKTLSYLNEVSEVQNAKIAFYKLYAPLELLKKISFLD 165
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQWKKKVVFVLNK 500
TPG N Q T + D ++++ D SE + L + +++ K + VLN+
Sbjct: 166 TPGFNSQNQSDTDTTNSILESVDGIIWLTLIDNVGKHSEKEIILSHIKRYASKSLCVLNQ 225
Query: 501 SDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSV 560
D +N E+ ++ + K K N I +SA++ L +S K+ SE
Sbjct: 226 KDRLKNQEEINISLEYAK----KAFNGLFEEIIAISAKNAL-----LSYDAPKEQSEHMR 276
Query: 561 NDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRL-KLETPIRIAERL-------LSSCET 612
DSH D + L++ + + K+R + +L T + RL + CET
Sbjct: 277 ADSH-----IDFVLDFLHTHIAPLAQESKKRTIITQLRTLVLRYARLSFHAHLRFTKCET 331
Query: 613 LV 614
L+
Sbjct: 332 LL 333
>gi|402547313|ref|ZP_10844183.1| dynamin family protein [Campylobacter sp. FOBRC14]
gi|401016392|gb|EJP75158.1| dynamin family protein [Campylobacter sp. FOBRC14]
Length = 615
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 26/205 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF-------------- 406
I+EP + IVG+++SGKS+ +NALLG+ L GV P T ++T +R+
Sbjct: 54 INEPVTIAIVGQFSSGKSTFLNALLGREILPTGVTPVTAKLTHIRYGQSYALRVDYKNGK 113
Query: 407 ------SDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
S++A QR Q Y P P+LK + +DTPG N + +T+E +
Sbjct: 114 ELNLDVSEIAKFVDQRVFGDDVKQLCIYAPMPLLKRVNFIDTPGLNSLSNSDTNITKEVL 173
Query: 461 PRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
V+++ + SE+ L + K + VLN+ D + ELE + +
Sbjct: 174 KDVAGVIWLSLIENAARASELNDLNEFLANSDKLAICVLNQKDKLSQS-ELENVLDHART 232
Query: 520 NTMKLLNIENVTIYPVSARSTLEAK 544
I +SA+ +EA+
Sbjct: 233 TYQNFF----AQIIAISAKQAIEAQ 253
>gi|381163755|ref|ZP_09872985.1| dynamin family protein [Saccharomonospora azurea NA-128]
gi|379255660|gb|EHY89586.1| dynamin family protein [Saccharomonospora azurea NA-128]
Length = 618
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRC------ 417
+V+VGE N GKSS++NALL K G+ P E+ T+L F Q C
Sbjct: 51 VVVVGETNRGKSSLVNALLAK----PGLSPVDAEVATSTYLVFEHADEWRAQACYPGQLA 106
Query: 418 --------------ERH--PDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
RH P+GQ Y+ P P+L+ + +VDTPG + L
Sbjct: 107 PVGFELDELERWVSARHDLPEGQLPPRYVEVSGPVPLLERISVVDTPGVGGLDSAHGELA 166
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
E A +LFV+ A P T E+ FL + VVF L+K+D ++ ++ +A
Sbjct: 167 MEAAAGATALLFVVDASAPFTAPELRFLATMADRVETVVFALSKTDQFRGWRQILDADRE 226
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + I+PVSAR
Sbjct: 227 LLAEHAPRF---ADAPIHPVSAR 246
>gi|242309069|ref|ZP_04808224.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524493|gb|EEQ64359.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 673
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 40/253 (15%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQID-----------------EPFLLVIVGEY 373
+ L E ++++ K S E +ID + ++ EP + I+G++
Sbjct: 3 KQYLQECLEILDKNSQKTELQKFIIDCQNNLNPNDYSQDFFESLQNKTKEPMQIAIIGQF 62
Query: 374 NSGKSSVINALLGKRYLKDGVVPTTNEITFLRF-SDLASE----------------EQQR 416
+SGKS+ +NALLG+ L G+ P T+++ + + D E +Q
Sbjct: 63 SSGKSTFLNALLGQDILPTGITPITSKVCKICYGEDFILEVLYKDGNKVLQNIHFLKQLT 122
Query: 417 CERHPDGQYIC-YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
+ + +C Y P +LKE+ +DTPG N + T + + D ++++ D
Sbjct: 123 RQNSKNIDSLCLYAPILMLKEINFLDTPGFNSQNHDDTKTTLDILKNVDGIIWLTLIDNA 182
Query: 476 LTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYP 534
SE L+ + + + +K + +LN+ D +N E++ ++ + E+ ++ + I P
Sbjct: 183 GKNSEKKLLQDFIKHYSQKTLCILNQKDRLKNEEEIQTSLQYANESFKEIFS----QIIP 238
Query: 535 VSARSTLEAKLSV 547
+SA+ L+A+L+
Sbjct: 239 ISAKMALQAQLNT 251
>gi|418461860|ref|ZP_13032920.1| GTPase [Saccharomonospora azurea SZMC 14600]
gi|359737987|gb|EHK86899.1| GTPase [Saccharomonospora azurea SZMC 14600]
Length = 603
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRC------ 417
+V+VGE N GKSS++NALL K G+ P E+ T+L F Q C
Sbjct: 36 VVVVGETNRGKSSLVNALLAK----PGLSPVDAEVATSTYLVFEHADEWRAQACYPGQLA 91
Query: 418 --------------ERH--PDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
RH P+GQ Y+ P P+L+ + +VDTPG + L
Sbjct: 92 PVGFELDELERWVSARHDLPEGQLPPRYVEVSGPVPLLERISVVDTPGVGGLDSAHGELA 151
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
E A +LFV+ A P T E+ FL + VVF L+K+D ++ ++ +A
Sbjct: 152 MEAAAGATALLFVVDASAPFTAPELRFLATMADRVETVVFALSKTDQFRGWRQILDADRE 211
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + I+PVSAR
Sbjct: 212 LLAEHAPRF---ADAPIHPVSAR 231
>gi|384154599|ref|YP_005537415.1| dynamin [Amycolatopsis mediterranei S699]
gi|399542932|ref|YP_006555594.1| dynamin [Amycolatopsis mediterranei S699]
gi|340532753|gb|AEK47958.1| dynamin [Amycolatopsis mediterranei S699]
gi|398323702|gb|AFO82649.1| dynamin [Amycolatopsis mediterranei S699]
Length = 612
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 42/205 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRCERHPD- 422
+V+VGE N GKSS++NALL + G+ P ++ T+L F + C +P
Sbjct: 48 VVVVGETNRGKSSLVNALLAR----PGLSPVDADVATATYLVFDHADTWGAHAC--YPGQ 101
Query: 423 --------GQYICYL--------------------PSPILKEMIIVDTPGTNVILQRQQR 454
GQ I ++ P P+L+ + +VDTPG +
Sbjct: 102 LAPVPIGIGQLINWVSAAHELPPGQIPPRYVEVTGPVPLLERLSLVDTPGVGGLDSMHGE 161
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA- 513
L +E A +LFV+ A P T +E+ FLR + + VVF L K D+++ E+ EA
Sbjct: 162 LAKEAAAGATALLFVVDASAPFTSTELQFLRDVGERVETVVFALTKVDMFRGWREVMEAD 221
Query: 514 ISFVKENTMKLLNIENVTIYPVSAR 538
++E+ + + +PVSAR
Sbjct: 222 RQLLREHAPRF---ADAVFHPVSAR 243
>gi|332706241|ref|ZP_08426309.1| dynamin family protein [Moorea producens 3L]
gi|332354946|gb|EGJ34418.1| dynamin family protein [Moorea producens 3L]
Length = 230
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 32/206 (15%)
Query: 323 EKQLIETERSVLLEAIDVI--KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSV 380
++Q+ ++ + L AI ++ ++ SPL ++V L D + + F + + G +N GKS++
Sbjct: 3 DQQIYQSVVNYLRSAIGLLDLEQDSPLRKDVIALCDHLE--NPTFRIAVFGPFNYGKSTL 60
Query: 381 INALLGKRYLKDGVVPTTNEITFLRFSD------------------------LASEEQQR 416
+NALLGKR L G++PTT +R+ + A ++QR
Sbjct: 61 LNALLGKRTLPIGLIPTTGAAIHIRYGEELHTRIILTDGTEISENSTEVLKRYAILDEQR 120
Query: 417 CERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C R Y P P LK + +D PGTN + Q L + + ADLV+ V+ +
Sbjct: 121 CMRSDVASIEVYCPHPFLKTGVEFLDLPGTN-DREAQDNLVRDQLLTADLVVQVLDGRQL 179
Query: 476 LTESEVVFLR--YTQQWKKKVVFVLN 499
+T E LR + K VVFV+N
Sbjct: 180 MTLGERENLRDWLIDRGIKTVVFVVN 205
>gi|434400912|ref|YP_007134916.1| GTP-binding protein HSR1-related protein [Stanieria cyanosphaera
PCC 7437]
gi|428272009|gb|AFZ37950.1| GTP-binding protein HSR1-related protein [Stanieria cyanosphaera
PCC 7437]
Length = 706
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 166/366 (45%), Gaps = 62/366 (16%)
Query: 319 FEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKS 378
F +++QL+ S+ +AI++ K+ L L A + I+ + V+ GE+ GKS
Sbjct: 7 FYRQKQQLL----SLFQKAINLAKERQELATLTRLKNAAQNLINGKLMAVVAGEFKQGKS 62
Query: 379 SVINALLGKRYL-------KDGVVPT-----TNEITFL---------------RFSDLAS 411
S+++A+L + L +V T EIT L + +D +
Sbjct: 63 SLLDAILEEPALFPVDLDIATNLVSTIAYGKKEEITVLCGDFDRPENIIIERSQIADYVT 122
Query: 412 EEQQRCERHPDGQYICY-LPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
E+ + + H + + P+ LKE +I+VDTPG + + T F+ AD+VLFV
Sbjct: 123 EKGNK-DNHKQARILSIESPNQKLKEGLILVDTPGLGSLNIEHTQATNTFIVNADVVLFV 181
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIEN 529
A PL+ E+ F+R + ++F++ K D +N E+ E+ T++L E
Sbjct: 182 SDATAPLSTKELDFIRNIHKNCPHIIFIVTKIDAVKNYQEIVESNRQKLAKTLQLAQ-EI 240
Query: 530 VTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGK 589
+ I PVS+R+ L A K + DS+ F+ LEK L+ L+ +
Sbjct: 241 IPIIPVSSRTKL--------AYLKSQDPEDLEDSN-----FETLEKQLWQLLN------Q 281
Query: 590 ERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISW 649
+R ++ L + L+S + + + Q ++D E +D L+ + K ++
Sbjct: 282 QRGKILLSRALNELADNLASMQLPLQTEFQSYQKD---NQEKLDELETQLQKAQN----- 333
Query: 650 RRKTLS 655
R K+LS
Sbjct: 334 RYKSLS 339
>gi|229183227|ref|ZP_04310457.1| hypothetical protein bcere0004_8040 [Bacillus cereus BGSC 6E1]
gi|228600366|gb|EEK57956.1| hypothetical protein bcere0004_8040 [Bacillus cereus BGSC 6E1]
Length = 750
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP 421
D F +V+VGE+++GKS+ INALL K L V PTT I F+R + ++
Sbjct: 54 DNRFEIVVVGEFSTGKSTFINALLRKNVLPSKVTPTTATINFIRHVEKGDGTEKAVINFY 113
Query: 422 DGQYI----------------------------CYLPSPILKE-MIIVDTPGTNVILQRQ 452
+G I ++ S L E ++IVDTPG +
Sbjct: 114 NGNKIESSFDHLENYVTEMSGNHNVVEEISHVDIFVESQYLTEGVVIVDTPGLQALHPEH 173
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD-LYQNAFELE 511
+R+T+E + +++ + + + ++P SE +FL+ ++ FV N+ D + +N E+
Sbjct: 174 ERITKEQIKKSNASVLLFNMEQPGKRSEFMFLKDLSDSIDRIFFVGNRMDGVPEN--EIS 231
Query: 512 EAI----SFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHW 565
+ + S +K NT + + E ++P+SA L+ G+D + L+ W
Sbjct: 232 DVVLSLESSLKNNTYQSIPEEYAKVFPISALQALK---------GRDKNTLTKRWQEW 280
>gi|315635721|ref|ZP_07890984.1| ATP/GTP-binding protein [Arcobacter butzleri JV22]
gi|315480018|gb|EFU70688.1| ATP/GTP-binding protein [Arcobacter butzleri JV22]
Length = 632
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 42/257 (16%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD--------------- 408
P + I G++++GKS+ +NALL + L G+ P T+++ F+ + +
Sbjct: 66 PMEVAITGQFSAGKSTFLNALLSRNILPTGITPVTSKVNFINYGEEYKLKITYYSGAQEY 125
Query: 409 -----LASEEQQRCERHPDGQYIC-YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
+A QR D +Y+ Y P ILK++ VDTPG N Q T + +
Sbjct: 126 APIESIADFTDQREHEMKDIKYLTLYAPMDILKDISFVDTPGLNSQSQSDTDTTRKVLRD 185
Query: 463 ADLVLFVISADRP--LTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
++++ D L+E+EV+ Y Q +K K + VLN+ D ++E +V E
Sbjct: 186 VGGIIWLTLIDNAGKLSEAEVL-EEYMQHFKNKSLCVLNQKDKLTPE-QVETTTKYVSEK 243
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRI-NTFDK--LEKLL 577
K + P+SA LE + H ++ + D + +I N F K LEK +
Sbjct: 244 FGKYF----AKVVPISAMMALEGRAQ--------HKDILLEDEYTKIVNQFKKDLLEKNV 291
Query: 578 --YSFLDGSSSTGKERM 592
F D S K ++
Sbjct: 292 DEIDFFDKSFKDYKNKI 308
>gi|339007394|ref|ZP_08639969.1| hypothetical protein BRLA_c11630 [Brevibacillus laterosporus LMG
15441]
gi|338776603|gb|EGP36131.1| hypothetical protein BRLA_c11630 [Brevibacillus laterosporus LMG
15441]
Length = 660
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 26/199 (13%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRA 463
F ++E++ C YI Y P+ ++ M++VDTPG + I R + E++ A
Sbjct: 177 FKKFVAKEEKAC----FADYIELYYTCPLTEQGMVLVDTPGADSINARHTGVAFEYLKNA 232
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D++LFV + +++ FL + K K+ F++N +DL QN EL++ ++ V+
Sbjct: 233 DVILFVTYYNHAFAQADREFLLQMGRVKDTFELDKMFFIVNAADLAQNDDELQDVLTHVE 292
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLS-----VSSAVGKDHSELSVNDSH--------W 565
+N + I + IYPVS+++ L A L SS+ +SVN+S
Sbjct: 293 KNLLS-CGIRHPRIYPVSSQTALLAHLHKNGKLTSSSEKIYRQRVSVNESEPLPDFHEGL 351
Query: 566 RINTFDKLEK-LLYSFLDG 583
+++ DK E+ L+ +DG
Sbjct: 352 KLSGLDKFEQDFLHFTIDG 370
>gi|375103305|ref|ZP_09749568.1| dynamin family protein [Saccharomonospora cyanea NA-134]
gi|374664037|gb|EHR63915.1| dynamin family protein [Saccharomonospora cyanea NA-134]
Length = 617
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 142/316 (44%), Gaps = 54/316 (17%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQR------- 416
+V+VGE N GKSS++NALL K G+ P E+ T+L F + ++E Q +
Sbjct: 51 VVVVGETNRGKSSLVNALLAK----PGLSPVEAEVATATYLVF-EHSTEWQAKACYPGQL 105
Query: 417 --------------CERH--PDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRL 455
C R P+GQ Y+ P P+L+ + +VDTPG + L
Sbjct: 106 APVGFELDELDRWVCARRELPEGQLPPRYVEVSGPVPLLERISVVDTPGVGGLDSAHGEL 165
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-I 514
E A +LFV+ A P T E+ FL + VVF L+K+D ++ ++ +A
Sbjct: 166 AMEAAAGATALLFVVDASAPFTAPELSFLATMADRVETVVFALSKTDQFRGWRQILDADR 225
Query: 515 SFVKENTMKLLNIENVTIYPVSARS-TLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKL 573
+ E+ + + I+PVSAR L AK A + V + + T L
Sbjct: 226 ELLAEHAPRF---ADAPIHPVSARMFELAAKAPSEQAAAMLREKSGVAE----LQT--AL 276
Query: 574 EKLLY--SFLDGSSSTGKERMRLKLETPIRIA--ERLLSSCETLVMKDCQDAKQDLTLAN 629
++LL S + G ++T + E +R+A ER L+S E+ K Q Q L +
Sbjct: 277 QELLVGRSVMLGEANTLRALSSALGEQQVRLASQERALTSGESEANKLRQRRDQ---LVS 333
Query: 630 EMIDSLKEYVMKMESE 645
+ S K + ++M E
Sbjct: 334 DRRSSTKGWQLRMRGE 349
>gi|384154992|ref|YP_005537807.1| ATP/GTP-binding protein [Arcobacter butzleri ED-1]
gi|345468546|dbj|BAK69997.1| ATP/GTP-binding protein [Arcobacter butzleri ED-1]
Length = 674
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 42/257 (16%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD--------------- 408
P + I G++++GKS+ +NALL + L G+ P T+++ F+ + +
Sbjct: 66 PMEVAITGQFSAGKSTFLNALLSRNILPTGITPVTSKVNFINYGEEYKLKITYYSGAQEF 125
Query: 409 -----LASEEQQRCERHPDGQYIC-YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
+A QR D +Y+ Y P ILK++ VDTPG N Q T + +
Sbjct: 126 APIESIADFTDQREHEMKDIKYLTLYAPMNILKDISFVDTPGLNSQSQSDTDTTRKVLRD 185
Query: 463 ADLVLFVISADRP--LTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
++++ D L+E+EV+ Y Q +K K + VLN+ D ++E +V E
Sbjct: 186 VGGIIWLTLIDNAGKLSEAEVL-EEYMQHFKNKSLCVLNQKDKLTPE-QVETTTKYVSEK 243
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRI-NTFDK--LEKLL 577
K + P+SA LE + H ++ + D + +I N F K LEK +
Sbjct: 244 FGKYF----AKVVPISAMMALEGRAQ--------HKDILLEDEYTKIVNQFKKDLLEKNV 291
Query: 578 --YSFLDGSSSTGKERM 592
F D S K ++
Sbjct: 292 DEIDFFDKSFKDYKNKI 308
>gi|421873403|ref|ZP_16305016.1| dynamin family protein [Brevibacillus laterosporus GI-9]
gi|372457465|emb|CCF14565.1| dynamin family protein [Brevibacillus laterosporus GI-9]
Length = 660
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 26/199 (13%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRA 463
F ++E++ C YI Y P+ ++ M++VDTPG + I R + E++ A
Sbjct: 177 FKKFVAKEEKAC----FADYIELYYTCPLTEQGMVLVDTPGADSINARHTGVAFEYLKNA 232
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D++LFV + +++ FL + K K+ F++N +DL QN EL++ ++ V+
Sbjct: 233 DVILFVTYYNHAFAQADREFLLQMGRVKDTFELDKMFFIVNAADLAQNDDELQDVLTHVE 292
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLS-----VSSAVGKDHSELSVNDSH--------W 565
+N + I + IYPVS+++ L A L SS+ +SVN+S
Sbjct: 293 KNLLS-CGIRHPRIYPVSSQTALLAHLHKNGKLTSSSEKIYRQRVSVNESEPLPDFHEGL 351
Query: 566 RINTFDKLEK-LLYSFLDG 583
+++ DK E+ L+ +DG
Sbjct: 352 KLSGLDKFEQDFLHFTIDG 370
>gi|344173552|emb|CCA88719.1| conserved hypothetical protein, putative nucleoside triphosphate
hydrolases [Ralstonia syzygii R24]
Length = 647
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 196 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 254
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D +A E+E IS T ++L+I+ +YPVSA+
Sbjct: 255 RSHVGGGQRKGCIAVLNKVDGLWDALKSEREVEAEISRQIVTTAQVLDIDVDRVYPVSAQ 314
Query: 539 STLEAKLSVSSAV 551
L AK+S SA+
Sbjct: 315 KGLLAKVSKDSAL 327
>gi|257057847|ref|YP_003135679.1| GTPase [Saccharomonospora viridis DSM 43017]
gi|256587719|gb|ACU98852.1| GTPase of unknown function [Saccharomonospora viridis DSM 43017]
Length = 617
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRCE----- 418
+V+VGE N GKSS++NALL K G+ P E+ T+L F Q C
Sbjct: 51 VVVVGETNRGKSSLVNALLAK----PGLSPVEAEVATATYLVFDHAEEWRAQACYPGQLA 106
Query: 419 ---------------RH--PDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
RH P+GQ Y+ P P+L+ + +VDTPG + L
Sbjct: 107 PVEFGLEELERWVSVRHDLPEGQLPPRYVEVSGPVPLLERISVVDTPGVGGLDSAHGELA 166
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
E A +LFV+ A P T E+ FL + VVF L+K+D ++ ++ EA
Sbjct: 167 MEAAAGATALLFVVDASAPFTMPELRFLTMLADRVETVVFALSKTDQFRGWRQILEANKR 226
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + +PVSAR
Sbjct: 227 LLAEHAPRF---ADCPFHPVSAR 246
>gi|253827429|ref|ZP_04870314.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313141637|ref|ZP_07803830.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510835|gb|EES89494.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130668|gb|EFR48285.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 681
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------- 408
D ++ E + I+G+++SGKS+ +NALLG+ L G+ P T+++ + + D
Sbjct: 45 DLYNKNQEAMQIAIIGQFSSGKSTFLNALLGENILPTGITPITSKVCKICYGDEYILEVI 104
Query: 409 ----------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQ 452
L+ + Q + + Y P +LKE+ +DTPG N Q
Sbjct: 105 YKNGHKIPQNIDFLHKLSRQNSQNIDH-----FCLYAPILLLKEINFLDTPGFNSQNQED 159
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAFELE 511
T + + D ++++ D SE L+ + + + +K + VLN+ D + E++
Sbjct: 160 TNTTLKILENVDGIIWLTLIDNAGKNSEKQLLKEFIKHYAQKSLCVLNQKDRLKTQEEID 219
Query: 512 EAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKD 554
++ + KE + I P+SA+ L+A L+ + K+
Sbjct: 220 LSVQYAKEAFSGIF----AEIIPISAKIGLQANLNSPQKILKN 258
>gi|157736558|ref|YP_001489241.1| ATP/GTP-binding protein [Arcobacter butzleri RM4018]
gi|157698412|gb|ABV66572.1| conserved hypothetical protein, predicted ATP/GTP-binding protein
[Arcobacter butzleri RM4018]
Length = 674
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 42/257 (16%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD--------------- 408
P + I G++++GKS+ +NALL + L G+ P T+++ F+ + +
Sbjct: 66 PMEVAITGQFSAGKSTFLNALLSRNILPTGITPVTSKVNFINYGEEYKLKITYYSGAQEY 125
Query: 409 -----LASEEQQRCERHPDGQYIC-YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
+A QR D +Y+ Y P ILK++ VDTPG N Q T + +
Sbjct: 126 APIESIADFTDQREHEMKDIKYLTLYAPMDILKDISFVDTPGLNSQSQSDTDTTRKVLRD 185
Query: 463 ADLVLFVISADRP--LTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
++++ D L+E+EV+ Y Q +K K + VLN+ D ++E +V E
Sbjct: 186 VGGIIWLTLIDNAGKLSEAEVL-EEYMQHFKNKSLCVLNQKDKLTPE-QVETTTKYVSEK 243
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRI-NTFDK--LEKLL 577
K + P+SA LE + H ++ + D + +I N F K LEK +
Sbjct: 244 FGKYF----AKVVPISAMMALEGRAQ--------HKDILLEDEYTKIVNQFKKDLLEKNV 291
Query: 578 --YSFLDGSSSTGKERM 592
F D S K ++
Sbjct: 292 DEIDFFDKSFKDYKNKI 308
>gi|254425603|ref|ZP_05039320.1| hypothetical protein S7335_169 [Synechococcus sp. PCC 7335]
gi|196188026|gb|EDX82991.1| hypothetical protein S7335_169 [Synechococcus sp. PCC 7335]
Length = 671
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 70/375 (18%)
Query: 333 VLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLK 391
+L AID KAS + V L + + E LLV+V GE GKSS+INA YL+
Sbjct: 2 LLKSAID-FAKASGHKDAVKRLHEIKQHLLEGKLLVVVAGEAKQGKSSLINA-----YLR 55
Query: 392 D-GVVP-----TTNEITFLRFSD----------LASEEQQRCERHPDGQYICYL------ 429
+ G+ P TN ++ + + D E+++ R Y+
Sbjct: 56 EPGLFPVDVDIATNLVSTITYGDSEKITVALGEQGKEKRKEISRADISDYVTEQGNQKNN 115
Query: 430 ----------PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
P+P LKE +++VDTPG + + +T +VP AD +LFV PL+
Sbjct: 116 KQARLLEIESPNPQLKEGLLLVDTPGVGSLNAKHTDITYAYVPSADSILFVSDVYAPLST 175
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLL-NI-ENVTIYPVS 536
E+ F++ + + +FV+ K+D N +E I +E +K L +I E++ I PVS
Sbjct: 176 KELNFIQQISKHCQNFIFVVTKADAVSN---YKEIIDSNREKLVKTLPDIGESLPIVPVS 232
Query: 537 ARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKL 596
+ LS++ +D +L DS+ F LE+ L+ L G++R ++ +
Sbjct: 233 ------SSLSLAYLDTEDPDDLE--DSN-----FAALEQELWLLL------GQQRGKILI 273
Query: 597 ETPIRIAERLLSSCETLVMKD---CQDAKQD--LTLANEMIDSLKEYVMKMESESISWRR 651
+ RL++ ++ + + CQ+ Q+ L + + D L + + +++++S +W+
Sbjct: 274 LRALTEFGRLVADLKSPLQAEWEACQNLNQEEKAKLESNLRD-LSKRLKQLQTDSAAWQY 332
Query: 652 KTLSLIDSTKSRVVK 666
+ I K+ + +
Sbjct: 333 QLNDGIQDIKTAIFR 347
>gi|384568093|ref|ZP_10015197.1| dynamin family protein [Saccharomonospora glauca K62]
gi|384523947|gb|EIF01143.1| dynamin family protein [Saccharomonospora glauca K62]
Length = 617
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLAS------------ 411
+V+VGE N GKSS++NALL + G+ P E+ T+L F A
Sbjct: 51 VVVVGETNRGKSSLVNALLAQ----PGLSPVEAEVATATYLVFEHAAEWRAKACYPGQLA 106
Query: 412 ------EEQQR--CERH--PDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
+E R C RH P+GQ Y+ P P+L+ + +VDTPG + L
Sbjct: 107 PVEFGLDELPRWVCARHELPEGQLPPRYVEVSGPVPLLERISVVDTPGVGGLDSAHGELA 166
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
E A +LFV+ A P T E+ FL + + VVF L+K+D ++ ++ +A
Sbjct: 167 MEAAAGATALLFVVDASAPFTSPELNFLSTMAERVETVVFALSKTDQFRGWRQILDADRK 226
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + +PVSAR
Sbjct: 227 LLAEHAPRF---AESPFHPVSAR 246
>gi|300791054|ref|YP_003771345.1| dynamin [Amycolatopsis mediterranei U32]
gi|299800568|gb|ADJ50943.1| dynamin [Amycolatopsis mediterranei U32]
Length = 612
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 42/205 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRCERHPD- 422
+V+VGE N GKS ++NALL + G+ P ++ T+L F + C +P
Sbjct: 48 VVVVGETNRGKSLLVNALLAR----PGLSPVDADVATATYLVFDHADTWGAHAC--YPGQ 101
Query: 423 --------GQYICYL--------------------PSPILKEMIIVDTPGTNVILQRQQR 454
GQ I ++ P P+L+ + +VDTPG +
Sbjct: 102 LAPVPIGIGQLINWVSAAHELPPGQIPPRYVEVTGPVPLLERLSLVDTPGVGGLDSMHGE 161
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA- 513
L +E A +LFV+ A P T +E+ FLR + + VVF L K D+++ E+ EA
Sbjct: 162 LAKEAAAGATALLFVVDASAPFTSTELQFLRDVGERVETVVFALTKVDMFRGWREVMEAD 221
Query: 514 ISFVKENTMKLLNIENVTIYPVSAR 538
++E+ + + +PVSAR
Sbjct: 222 RQLLREHAPRF---ADAVFHPVSAR 243
>gi|303231670|ref|ZP_07318393.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513619|gb|EFL55638.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
Length = 838
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 32/207 (15%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR------------------ 405
P ++IVG +++GKS+ +NAL G+ K G +PTT T L
Sbjct: 121 PPQVMIVGSFSTGKSTFLNALFGESIAKVGALPTTAITTKLSYGPEDTLLVYFKNGDIEN 180
Query: 406 -----FSDLASEEQQRCER-HPDGQYI-CYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
F+ L SEE + + H Y+ +LP+ +LK I+D+PG + + + T+
Sbjct: 181 YRVDDFNQLTSEEGEEWQTLHNSILYVERFLPNDLLKSFSIIDSPGLDAKAEHTNQ-TKN 239
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD-LYQNAFELEEAISFV 517
F+ RAD++L++ SA+ ++ EV +R + K V ++NK D L + +LE+ +S +
Sbjct: 240 FIERADIILWMFSAEHAVSAREVAAIRALDA-RYKPVAIINKIDTLDEEEDDLEDLLSSL 298
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
K L++ +YPVSA+ E K
Sbjct: 299 KGKLGNLVS----GVYPVSAQLAFEGK 321
>gi|414079037|ref|YP_006998354.1| dynamin family protein [Anabaena sp. 90]
gi|413973160|gb|AFW97247.1| dynamin family protein [Anabaena sp. 90]
Length = 658
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 57/324 (17%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYL-KDGVVPTTNEITFLRFSDL---------- 409
I+E +V+ GE+ GKSS++NALL + L V TTN ++ + + +
Sbjct: 42 IEEKLFVVVCGEFKQGKSSLMNALLNEPELFPVDVDITTNLVSSITYGETEKITVVLGES 101
Query: 410 ---ASEEQQRCE-------RHPDGQ------YICYLPSPILKE-MIIVDTPGTNVILQRQ 452
S+E QR E +H G I P+P LKE +++VDTPG +
Sbjct: 102 GKEQSQEIQRAEIPNYVTEQHNKGNVHQAKMLILQSPNPQLKEGLVLVDTPGVGSLNVEH 161
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLR-----YTQQWKKKVVFVLNKSDLYQNA 507
+T F+P AD ++FV A PL+ E+ F+ Y Q ++FV+ K D N
Sbjct: 162 TAVTYAFIPNADAIIFVSDALAPLSAKELDFITERIVPYCQ----NLIFVVTKIDAVGN- 216
Query: 508 FELEEAISFVKENTMKLLNIEN--VTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHW 565
E I+ +E +LL + ++I PVS+ L+ S + +D + + + W
Sbjct: 217 --YENIIASNQEKLAQLLKRPDSEISIIPVSSSLKLDYLKSQETEDLEDSNFQHLENELW 274
Query: 566 RINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDL 625
+ + + + LL L T R +++ PI++ ET Q +KQ+L
Sbjct: 275 GLISQQRGKILLIKAL-----TELGRAVNEIKAPIQV------EWETY----QQQSKQEL 319
Query: 626 TLANEMIDSLKEYVMKMESESISW 649
+ + + KE + ++ + W
Sbjct: 320 EKSERQLQATKEKLAAIQENNADW 343
>gi|171909672|ref|ZP_02925142.1| hypothetical protein VspiD_00830 [Verrucomicrobium spinosum DSM
4136]
Length = 637
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 355 IDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKR---YLKDGVVPTTNEITFLRFSDLAS 411
I A SQ+ F + +VG +GKS+ INA+LG+R Y P TN +T F++
Sbjct: 41 ITAASQLR--FSIGVVGRAKTGKSTFINAVLGRRDDLYAPVNRSPATNVVTC--FAN-GP 95
Query: 412 EEQQRCERHPD-----GQYI---------C----------------YLPSPILK-EMIIV 440
EE R RH D GQ I C P P L ++++V
Sbjct: 96 EETIRVVRHSDRPEDPGQLIHAVEIRKFACEEGNPRNSKNVKTIEVIAPLPRLGVDVVLV 155
Query: 441 DTPGT-NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-KKVVFVL 498
DTPG N + + +F+PR D V+F++ AD P ESE+ L + Q+ K++F +
Sbjct: 156 DTPGADNALSNLHDNVLLDFLPRLDAVIFLVRADDPFVESEIRLLSHVQEAHVSKLLFGV 215
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIEN 529
+D A E +E ++ N L +E+
Sbjct: 216 TMAD----AVEADELAEGLEHNRAVLTKLEH 242
>gi|410723782|ref|ZP_11363004.1| dynamin family protein [Clostridium sp. Maddingley MBC34-26]
gi|410602784|gb|EKQ57241.1| dynamin family protein [Clostridium sp. Maddingley MBC34-26]
Length = 644
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 25/147 (17%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS---------------- 407
P L+VI+GE+ +GKS+ INA+L + LK V P T +T +++S
Sbjct: 120 PLLVVIIGEFKTGKSTFINAILREELLKSDVTPATAVVTMIKYSLNRVLIAYLKDGSTKQ 179
Query: 408 -------DLASEEQQRCER-HPDGQYI-CYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
L++E E + YI +P+ IL ++ IVDTPG N T++
Sbjct: 180 FPLDMLEKLSAEGDSSAEEFRSNISYIEIGIPNDILNDITIVDTPGLNADKPLHTIATKD 239
Query: 459 FVPRADLVLFVISADRPLTESEVVFLR 485
F+ RAD+VL++ S + + +E+ ++
Sbjct: 240 FMNRADIVLWMFSYAKAGSRTELAEIK 266
>gi|218439384|ref|YP_002377713.1| dynamin [Cyanothece sp. PCC 7424]
gi|218172112|gb|ACK70845.1| Dynamin family protein [Cyanothece sp. PCC 7424]
Length = 666
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 138/326 (42%), Gaps = 65/326 (19%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVP-----TTNEITFLRFS------------ 407
L+V+ GE+ GKSS++NA L + G+ P TTN ++ + +
Sbjct: 46 LLVVVCGEFKQGKSSLLNAFLNET----GLFPVDIEVTTNLVSTITYGAKEKISVVLGEQ 101
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQ 452
D +E++ + P+P LKE +++VDTPG +
Sbjct: 102 NKETVKQIQRDEIPDYVTEQRNSRNAKKAKMLVIESPNPQLKEGLVLVDTPGIGSLNTEH 161
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLR-----YTQQWKKKVVFVLNKSDLYQNA 507
+T F+P AD +LFV A +PLT E+ FL+ +T K ++F++ K D ++
Sbjct: 162 TAITYAFIPNADAILFVTDALKPLTTEELDFLKKRILPHT----KNIIFLITKIDTLASS 217
Query: 508 FELEEAISFVKENTMKLLNI--ENVTIYPVSARSTLEAKLSVSSAVGKDHSEL-SVNDSH 564
+ E + +E + L+ +++ PVS+R+ L+ L HS + +
Sbjct: 218 -DQEVVLENNREKLAETLDCSPRKISLIPVSSRAKLDY-LEYDEITDLKHSNFEELEQTI 275
Query: 565 WRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQD 624
W++ + + L + LD + E ++ P+++A +C K++
Sbjct: 276 WQLVSEQTGQTFLLNALDELNQCLSE-----IKAPMQVAWNAHQNC----------TKEE 320
Query: 625 LTLANEMIDSLKEYVMKMESESISWR 650
L I ++ + + S + WR
Sbjct: 321 LDAQEHQIKDTQKRLQDLLSNNAKWR 346
>gi|348175161|ref|ZP_08882055.1| dynamin [Saccharopolyspora spinosa NRRL 18395]
Length = 619
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK--DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
+V+VGE N GKSS++NALLG L D V T + F A+ ++ P
Sbjct: 53 VVVVGETNRGKSSLVNALLGHPGLSPVDADVATATYLQFTHGEQWAAHACYPGQQEPVPF 112
Query: 425 YICYLPS----------------------PI--LKEMIIVDTPGTNVILQRQQRLTEEFV 460
+ LPS PI L +I+VDTPG + L E
Sbjct: 113 DLAQLPSWAGAGRDLPEGQLPPRYVQITAPIETLARVIVVDTPGVGGLDALHGELAMEAA 172
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-ISFVKE 519
A +LFV+ A P T E+ FL+ + + VVF L K+D ++ ++ EA + E
Sbjct: 173 ASATALLFVVDASAPFTRGELEFLQRVAERVETVVFALAKTDQHRGWRQVLEADRRLLVE 232
Query: 520 NTMKLLNIENVTIYPVSAR 538
+ + +V I+PVSAR
Sbjct: 233 HAPRF---ADVPIFPVSAR 248
>gi|340785810|ref|YP_004751275.1| hypothetical protein CFU_0616 [Collimonas fungivorans Ter331]
gi|340551077|gb|AEK60452.1| hypothetical protein CFU_0616 [Collimonas fungivorans Ter331]
Length = 645
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LKE ++I+DTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 195 IVNFPHPLLKEGLVIIDTPGLNAI-GTEPELTLNLIPNAHAVLFILAADTGVTKSDIDVW 253
Query: 485 RYTQQWKKKVVFVLNK----SDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
R+ + VLNK D ++ FE+E+ IS + L + +YPVSA+
Sbjct: 254 RHHIGSGAGRMVVLNKIDSMWDELRSPFEVEQQISKQVSSVAHTLGLSEAQVYPVSAQKG 313
Query: 541 LEAKLS 546
L K++
Sbjct: 314 LVGKIN 319
>gi|443324685|ref|ZP_21053421.1| small GTP-binding protein domain protein [Xenococcus sp. PCC 7305]
gi|442795698|gb|ELS05049.1| small GTP-binding protein domain protein [Xenococcus sp. PCC 7305]
Length = 459
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 25/153 (16%)
Query: 354 LIDAVSQIDEPFLLV-IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE 412
L +A+ ++D+ L + G + GKSSVINAL+G+ LK G + N +T
Sbjct: 58 LKNALDKLDQKLLRISTFGLVSCGKSSVINALVGREILKTGPL---NGVT---------- 104
Query: 413 EQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVIS 471
+ P Q + P+P E+ ++DTPG + I Q ++++ +E ++DL+LFVI+
Sbjct: 105 ------QFP--QSTSWQPTPDSVEVELIDTPGLDEIDGQAREKMAQEIAQKSDLILFVIA 156
Query: 472 ADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
D +T +E + L ++ +K ++ + NK DLY
Sbjct: 157 GD--ITRTEYLVLCQLRRSQKPLIIIFNKVDLY 187
>gi|300692625|ref|YP_003753620.1| hypothetical protein RPSI07_3006 [Ralstonia solanacearum PSI07]
gi|299079685|emb|CBJ52362.1| conserved protein of unknown function, putative nucleoside
triphosphate hydrolases [Ralstonia solanacearum PSI07]
gi|344168276|emb|CCA80549.1| conserved hypothetical protein, putative nucleoside triphosphate
hydrolases [blood disease bacterium R229]
Length = 647
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 196 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 254
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D +A E+E IS T ++L+I+ +YPVSA+
Sbjct: 255 RSHVGGGQRKGCIAVLNKVDGLWDALKSEREVEAEISRQIVTTAQVLDIDVDRVYPVSAQ 314
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 315 KGLLAKVSKDPAL 327
>gi|302531258|ref|ZP_07283600.1| dynamin [Streptomyces sp. AA4]
gi|302440153|gb|EFL11969.1| dynamin [Streptomyces sp. AA4]
Length = 608
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRC------ 417
+V+VGE N GKSS++NALL G+ P ++ T+L F Q C
Sbjct: 45 VVVVGETNRGKSSLVNALLAT----PGLSPVDADVATATYLVFEHAQQWGAQACYPGQLA 100
Query: 418 ----------------ERHPDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
P GQ Y+ P P+L+ + +VDTPG + L
Sbjct: 101 SVPFDLTQLVDWVSAAHELPPGQLPPRYVEVSGPVPLLERLTLVDTPGVGGLDSLHGELA 160
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
+E A ++FV+ A P T +E+ FLR + VVFVL K+D ++ E+ +A
Sbjct: 161 KEAAAGATALVFVVDASAPFTSTELQFLREVADRVETVVFVLAKTDAFRGWREILDADRQ 220
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + +PVSAR
Sbjct: 221 LLAEHAPRF---ADAVFHPVSAR 240
>gi|256380982|ref|YP_003104642.1| HSR1-like GTP-binding protein [Actinosynnema mirum DSM 43827]
gi|255925285|gb|ACU40796.1| GTP-binding protein HSR1-related [Actinosynnema mirum DSM 43827]
Length = 610
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE-RHPDG-- 423
+V+VGE N GKSS++NALL G+ P E+ + L E+ C R+ G
Sbjct: 45 VVVVGETNRGKSSLVNALLAT----PGLSPVDAEVATAAYLVLGHGERWACRARYAGGAP 100
Query: 424 -------QYICYL--------------------PSPILKEMIIVDTPGTNVILQRQQRLT 456
Q I ++ P P+L+ + IVDTPG + L
Sbjct: 101 PVEFDRSQLIAWVSAAHELPEGALPPRSVEVDAPIPLLERLTIVDTPGVGGLDTAHGELA 160
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
E A +LFV+ A P T E+ FLR + + VVF L K D ++ E+ EA +
Sbjct: 161 AEAAADATALLFVVDASAPFTRGELEFLRSVGERVETVVFALTKVDQFRGWREVVEADRA 220
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ ++ + +PVSAR
Sbjct: 221 LLAQHAPRF---AGAVFHPVSAR 240
>gi|154174332|ref|YP_001408714.1| GTP-binding protein [Campylobacter curvus 525.92]
gi|153793077|gb|ABS50396.1| GTP-binding protein [Campylobacter curvus 525.92]
Length = 615
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------------- 407
I+EP + IVG+++SGKS+ +N LLG+ L GV P T ++T +R+
Sbjct: 54 INEPVTIAIVGQFSSGKSTFLNVLLGREILPTGVTPVTAKLTHIRYGQSYALRVDYKNGK 113
Query: 408 -------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
++A QR Q Y P P+LK + +DTPG N + +T+E +
Sbjct: 114 ELNLDVDEIAKFVDQRVFGDDVKQLCIYAPVPLLKSVNFIDTPGLNSLSNSDTNITKEVL 173
Query: 461 PRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
V+++ + SE+ L + K + VLN+ D + ELE + +
Sbjct: 174 KDVAGVIWLSLIENAARASELNDLNEFLANSNKLAICVLNQKDKLSQS-ELENVLDHART 232
Query: 520 NTMKLLNIENVTIYPVSARSTLEAK 544
I +SA+ L A+
Sbjct: 233 TYKNFF----AQIIAISAKQALTAQ 253
>gi|237751672|ref|ZP_04582152.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229373038|gb|EEO23429.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 672
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 341 IKKASPLMEEVSLLIDAVSQ-IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
+ +++PL + +I+ + Q ID+P + I+G+++SGKS+ +NALLGK L G+ P T
Sbjct: 50 LTQSTPLYSQNKAIINRLLQDIDKPMKVAIIGQFSSGKSTFLNALLGKEILPSGITPVTA 109
Query: 400 EITFLRFSD------------LASE------EQQRCERHPDGQYICYLPSPILKEMIIVD 441
++ + + D + S+ E E Y ++P +LK + +D
Sbjct: 110 KVCEITYGDEVGLEIHYKNNAVVSKPISYLGEVDEIENLKISYYKLFVPLELLKVVSFLD 169
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNK 500
TPG N + T + D ++++ D SE L+ + +++ K + VLN+
Sbjct: 170 TPGFNSQNESDTETTNTILESVDGIIWLTLIDNVGKNSEKEILQTHVKRYAHKSLCVLNQ 229
Query: 501 SDLYQNAFELEEAISFVK 518
D ++ E+ +I + K
Sbjct: 230 KDRLKSEEEINTSIEYAK 247
>gi|345021258|ref|ZP_08784871.1| hypothetical protein OTW25_08029 [Ornithinibacillus scapharcae
TW25]
Length = 1204
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 139/315 (44%), Gaps = 62/315 (19%)
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ 415
D +S++ + ++L IV YN + ++ +L I F ++E +
Sbjct: 716 DKLSKMFQSYVLAIVKGYNDHRDTLGQSLT---------------IELSDFVGYVTDESK 760
Query: 416 RC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
C D Y C + K + +VDTPG + + R + +++ AD +L+V +
Sbjct: 761 ACFVESIDLYYDCSITQ---KGITLVDTPGADSVNARHTNVAFDYIKNADAILYVTYYNH 817
Query: 475 PLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIEN 529
+T+++ F+ + K K+ F++N +DL ++ EL +++VKE K L + N
Sbjct: 818 AITKADKDFVMQLGRVKDSFQLDKMFFIINAADLAKDDSELTLVVNYVKEQLQK-LGVRN 876
Query: 530 VTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGK 589
+YPVS++ +LE KL+ + +I +F E+ YSFLD S
Sbjct: 877 PRLYPVSSKVSLEEKLAAKPV-------------NQQITSF---EQDFYSFLDHELS--- 917
Query: 590 ERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISW 649
+L +++ I ER + + K AN I + Y +SE ++
Sbjct: 918 ---QLAVKSAIHEIERTERTFRHYLQK-----------ANLSIQEKENY----KSELVTR 959
Query: 650 RRKTLSLIDSTKSRV 664
+ + +S + ST R+
Sbjct: 960 KEQLVSTVTSTDGRI 974
>gi|375098268|ref|ZP_09744533.1| dynamin family protein [Saccharomonospora marina XMU15]
gi|374659001|gb|EHR53834.1| dynamin family protein [Saccharomonospora marina XMU15]
Length = 617
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK--DGVVPTTNEITFLRFSDLASEEQQRCERHPDG- 423
+V+VGE N GKSS++NALL +R L D V T + F + +++ + P G
Sbjct: 51 VVVVGETNRGKSSLVNALLAERGLSPVDADVATATYLVFEHSDEWSAQACYPGQLAPVGF 110
Query: 424 ------QYIC-------------YL----PSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
+++C Y+ P P+L+ + +VDTPG + L E
Sbjct: 111 ELDQLARWVCAGRDLPEGQLPPRYVEVRGPVPLLERISLVDTPGVGGLDSTHGELAMEAA 170
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFE-LEEAISFVKE 519
A +LFV+ A P T +E+ FL + VVF L+K D ++ + L+ + E
Sbjct: 171 ANATALLFVVDASAPFTSTELRFLTTMADRVETVVFALSKIDQFRGWRQVLDLDRQLLAE 230
Query: 520 NTMKLLNIENVTIYPVSAR 538
+ + IYPVSAR
Sbjct: 231 HAPRF---AEAPIYPVSAR 246
>gi|157164882|ref|YP_001467249.1| glucosamine fructose-6-phosphate aminotransferase (isomerizing)
[Campylobacter concisus 13826]
gi|112801960|gb|EAT99304.1| GTP-binding protein [Campylobacter concisus 13826]
Length = 610
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 26/129 (20%)
Query: 335 LEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGV 394
L A D IK E ++LLID ++EP L+ ++G+++SGKS+ +NALLG+ L G+
Sbjct: 37 LHASDEIK------ESLNLLIDT---LNEPPLIAVIGQFSSGKSTFLNALLGQNILPSGL 87
Query: 395 VPTTNEITFLRFSD---------------LASEE--QQRCERHPDGQYICYLPSPILKEM 437
P T + L+F+ LAS E Q Y PS ILKE+
Sbjct: 88 TPVTAKAVRLKFAKLPLLSVKFTNGSESLLASSELAQLNAMSEQIKSMTLYAPSEILKEV 147
Query: 438 IIVDTPGTN 446
+DTPG N
Sbjct: 148 NFIDTPGLN 156
>gi|443314542|ref|ZP_21044093.1| putative GTPase [Leptolyngbya sp. PCC 6406]
gi|442785865|gb|ELR95654.1| putative GTPase [Leptolyngbya sp. PCC 6406]
Length = 608
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 35/195 (17%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT---NEITF-------LRFSDLASEE- 413
F + +VGE+ GKSS+INALLG+ L ++PTT N I + ++F D +E+
Sbjct: 56 FSIAVVGEFKRGKSSLINALLGQNILPTNILPTTATLNRIKYGIEPRIQIKFKDGKTEDI 115
Query: 414 ------QQRCERHPDGQYIC--------YLP-SPILKEMIIVDTPGTNVILQRQQRLTE- 457
Q + P+ I Y P S ++ I+DTPG L+ + +T
Sbjct: 116 ESDKLSQYVTKLTPESTRIAASVKEATIYYPISYCRNDVDIIDTPG----LEDEAAMTAV 171
Query: 458 --EFVPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+P+ D +FV A PL++SE VFL + +Q +++FV+ D Q+ + ++A
Sbjct: 172 TLSTLPKVDAAIFVTMALAPLSKSEEVFLSEKLLRQSISRILFVVTGIDRCQSIEDADKA 231
Query: 514 ISFVKENTMKLLNIE 528
I K+ +++ +E
Sbjct: 232 IQRTKDKIKQIIGLE 246
>gi|241661901|ref|YP_002980261.1| hypothetical protein Rpic12D_0282 [Ralstonia pickettii 12D]
gi|240863928|gb|ACS61589.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length = 648
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 197 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 255
Query: 485 R--YTQQWKKKVVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D L+ ++A E+E +S T ++L+I+ +YPVSA+
Sbjct: 256 RSHVGGGQRKGCIAVLNKVDGLWDPLKSAEEVENEVSRQIMTTAQVLDIDVERVYPVSAQ 315
Query: 539 STLEAKLS 546
L AK+S
Sbjct: 316 KGLVAKVS 323
>gi|354615671|ref|ZP_09033414.1| GTP-binding protein HSR1-related protein [Saccharomonospora
paurometabolica YIM 90007]
gi|353219976|gb|EHB84471.1| GTP-binding protein HSR1-related protein [Saccharomonospora
paurometabolica YIM 90007]
Length = 592
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 34/201 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGK--RYLKDGVVPTTNEITFLRFS----------------D 408
+V+VGE N GKSS++NALL + R D T + LR + D
Sbjct: 26 VVVVGETNRGKSSLVNALLAEPGRSPVDADAATATYL-VLRHAPEWTARACYPGRLAPVD 84
Query: 409 LASEEQQR----CERHPDGQY------ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
+E R P+GQ +C P PIL+ + +VDTPG + L E
Sbjct: 85 FEPDELARWVSTAHELPEGQLPPRHVEVCG-PVPILERLTLVDTPGVGGLDSTHGELAAE 143
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-ISFV 517
A ++LFV+ A P + +E+ FL + + VVF L K+D ++ E+ EA + +
Sbjct: 144 AAADATVLLFVVDASAPFSAAELRFLATAAERVETVVFALTKTDRFRGWREVLEADRALL 203
Query: 518 KENTMKLLNIENVTIYPVSAR 538
E+ + +PVSAR
Sbjct: 204 AEHAPRF---AEAAFHPVSAR 221
>gi|429759711|ref|ZP_19292207.1| hypothetical protein HMPREF0870_00640 [Veillonella atypica KON]
gi|429179301|gb|EKY20557.1| hypothetical protein HMPREF0870_00640 [Veillonella atypica KON]
Length = 563
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 27/159 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDG--- 423
+++VG +++GKS+++N +GK L++ P T T L+F SE ++ + DG
Sbjct: 44 ILVVGSFSAGKSALLNKYIGKSVLEESQAPETAFATELKF----SENERLVAEYIDGTKI 99
Query: 424 ----------------QYICYLPSPILK---EMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
ICY+ S +K + I+VDTPG + ++R + +++P+
Sbjct: 100 ENLDFNVLKSDADKISNLICYVNSENIKLHPDYIMVDTPGFDSGVERHNKALIKYIPQGT 159
Query: 465 LVLFVISADR-PLTESEVVFLRYTQQWKKKVVFVLNKSD 502
+ VI +D+ L+ES + FL+ + + ++NK D
Sbjct: 160 AYILVIDSDKGTLSESTLNFLKEVNCYSNDIGIIINKCD 198
>gi|425467077|ref|ZP_18846361.1| Dynamin family protein [Microcystis aeruginosa PCC 9809]
gi|389830249|emb|CCI27936.1| Dynamin family protein [Microcystis aeruginosa PCC 9809]
Length = 670
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 42/216 (19%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYL-KDGVVPTTNEITFLRFS----------DLA 410
+E +V+ GE+ GKSS+INA + + L V TTN ++ + ++ D+
Sbjct: 43 EEKIYVVVCGEFKQGKSSLINAFIDETNLFPVDVKITTNLVSTIAYAEQEEITVILGDIG 102
Query: 411 SEEQQRCERHPDGQYICYL----------------PSPILKE-MIIVDTPGTNVILQRQQ 453
+ ++ R +Y+ P+P LK+ +++VDTPGT +
Sbjct: 103 QGQAKQINRSEIAEYVTEQKNKSNQKKAKLLMIESPNPYLKDGLVLVDTPGTGSLNAEHT 162
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLR-----YTQQWKKKVVFVLNKSDLYQNAF 508
LT F+P AD +LFV PL ++ F++ + Q ++FVL K D N
Sbjct: 163 ALTYSFIPNADAILFVSDIQAPLKVEDLNFIKERILPHCQ----NIIFVLTKIDAITN-- 216
Query: 509 ELEEAISFVKENTMKLLNI--ENVTIYPVSARSTLE 542
++ I +E LN+ E +++ PVS+++ E
Sbjct: 217 -YQKIIDSNREKLSNSLNLSPEQISLIPVSSKAKQE 251
>gi|365153527|ref|ZP_09349967.1| hypothetical protein HMPREF1019_00650 [Campylobacter sp. 10_1_50]
gi|363652055|gb|EHL91107.1| hypothetical protein HMPREF1019_00650 [Campylobacter sp. 10_1_50]
Length = 610
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 26/131 (19%)
Query: 335 LEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGV 394
L A D IK E ++LLID ++EP L+ ++G+++SGKS+ +NALLG+ L G+
Sbjct: 37 LHASDEIK------ESLNLLIDT---LNEPPLIAVIGQFSSGKSTFLNALLGQNILPSGL 87
Query: 395 VPTTNEITFLRFSD---------------LASEEQQRCERHPD--GQYICYLPSPILKEM 437
P T + L+F+ LAS E + Y PS ILKE+
Sbjct: 88 TPVTAKAVRLKFAKMPLLSVKFTNGSESLLASSELTELNAMSEQIKSMTLYAPSEILKEV 147
Query: 438 IIVDTPGTNVI 448
+DTPG N +
Sbjct: 148 NFIDTPGLNSL 158
>gi|416113880|ref|ZP_11593529.1| Putative ATP /GTP binding protein [Campylobacter concisus UNSWCD]
gi|384578366|gb|EIF07632.1| Putative ATP /GTP binding protein [Campylobacter concisus UNSWCD]
Length = 610
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 26/131 (19%)
Query: 335 LEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGV 394
L A D IK E ++LLID ++EP L+ ++G+++SGKS+ +NALLG+ L G+
Sbjct: 37 LHASDEIK------ESLNLLIDT---LNEPPLIAVIGQFSSGKSTFLNALLGQNILPSGL 87
Query: 395 VPTTNEITFLRFSD---------------LASEEQQRCERHPD--GQYICYLPSPILKEM 437
P T + L+F+ LAS E + Y PS ILKE+
Sbjct: 88 TPVTAKAVRLKFAKMPLLSVKFTNGSESLLASSELAELNAMSEQIKSMTLYAPSEILKEV 147
Query: 438 IIVDTPGTNVI 448
+DTPG N +
Sbjct: 148 NFIDTPGLNSL 158
>gi|421899876|ref|ZP_16330239.1| gtpase (dynamin-related) harboring a t-snare domain protein
[Ralstonia solanacearum MolK2]
gi|206591082|emb|CAQ56694.1| gtpase (dynamin-related) harboring a t-snare domain protein
[Ralstonia solanacearum MolK2]
Length = 662
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 211 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 269
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D ++ E+E I+ T ++L+I+ +YPVSA+
Sbjct: 270 RSHVGGGQRKGCIAVLNKVDGLWDSLKSEQEVESEINRQIVTTAQVLDIDVKRVYPVSAQ 329
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 330 KGLLAKVSRDPAL 342
>gi|300705246|ref|YP_003746849.1| hypothetical protein RCFBP_21088 [Ralstonia solanacearum CFBP2957]
gi|299072910|emb|CBJ44266.1| conserved protein of unknown function, putative nucleoside
triphosphate hydrolases [Ralstonia solanacearum
CFBP2957]
Length = 647
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 196 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 254
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D ++ E+E I+ T ++L+I+ +YPVSA+
Sbjct: 255 RSHVGGGQRKGCIAVLNKVDGLWDSLKSEQEVESEINRQIVTTAQVLDIDVKRVYPVSAQ 314
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 315 KGLLAKVSHDPAL 327
>gi|255323186|ref|ZP_05364321.1| GTP-binding protein [Campylobacter showae RM3277]
gi|255299709|gb|EET78991.1| GTP-binding protein [Campylobacter showae RM3277]
Length = 615
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 21/163 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
+ P + IVG+++SGKS+ +NALLG L G+ P T++ TF+R+
Sbjct: 54 LSSPLTVAIVGQFSSGKSTFLNALLGSEILPSGLTPVTSKPTFIRYGAAPGLSVLYENGR 113
Query: 409 ---LASEE-----QQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
L EE QR + Y PS ILK + VDTPG N + + +T E +
Sbjct: 114 ELYLGVEEIGRFVDQRVFGDDVSRLCVYAPSEILKLVNFVDTPGLNSLSKADTAVTHEVL 173
Query: 461 PRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSD 502
V+++ AD SE ++ + K + +LN+ D
Sbjct: 174 KDVAGVIWLSLADNAARASESAQIKEFLAGGGKTAICLLNQKD 216
>gi|83746560|ref|ZP_00943610.1| Hypothetical Protein RRSL_03732 [Ralstonia solanacearum UW551]
gi|207742245|ref|YP_002258637.1| gtpase (dynamin-related) harboring a t-snare domain protein
[Ralstonia solanacearum IPO1609]
gi|83726694|gb|EAP73822.1| Hypothetical Protein RRSL_03732 [Ralstonia solanacearum UW551]
gi|206593633|emb|CAQ60560.1| gtpase (dynamin-related) harboring a t-snare domain protein
[Ralstonia solanacearum IPO1609]
Length = 662
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 211 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 269
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D ++ E+E I+ T ++L+I+ +YPVSA+
Sbjct: 270 RSHVGGGQRKGCIAVLNKVDGLWDSLKSEQEVESEINRQIVTTAQVLDIDVKRVYPVSAQ 329
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 330 KGLLAKVSRDPAL 342
>gi|304317301|ref|YP_003852446.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433655463|ref|YP_007299171.1| thiamine-phosphate diphosphorylase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778803|gb|ADL69362.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293652|gb|AGB19474.1| thiamine-phosphate diphosphorylase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 209
Score = 63.9 bits (154), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG D D ++EA+ V ++ L + S K YE A LK + ++ F+I +R+DIA
Sbjct: 19 AGIDFYDAVEEALKNGVTMLQLREKDISSKEFYEIAVRLKDIAAKYSIPFIINDRIDIAL 78
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
+V+A GV L + LP +AR M D ++G + ++D A A +GAD++
Sbjct: 79 SVDADGVHLGQEDLPCSIARKIMGDK-------KIIGISAGSVDEAVKA-ERDGADYIGA 130
Query: 214 VCCFGEGQKADVIENSLFTN-------VKIPIFIMNASPLVDVSKFLKSGASGFVISLE 265
F G K D+ E N V IP+ + + +K+G G + E
Sbjct: 131 GAVFYTGTKKDIGEAIGLLNLEKIKKAVNIPVVAIGGIKYSNAQDVMKTGVDGISVVSE 189
>gi|424782979|ref|ZP_18209822.1| Putative ATP/GTP-binding protein [Campylobacter showae CSUNSWCD]
gi|421959122|gb|EKU10733.1| Putative ATP/GTP-binding protein [Campylobacter showae CSUNSWCD]
Length = 615
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
+ P + IVG+++SGKS+ +NALLG L G+ P T++ TF+R+
Sbjct: 54 LSSPLTVAIVGQFSSGKSTFLNALLGSEILPSGLTPVTSKPTFIRYGAAPGLSVLYENGR 113
Query: 409 ---LASEE-----QQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
L EE QR + Y PS ILK + VDTPG N + + +T E +
Sbjct: 114 ELYLGVEEIGRFVDQRVFGDDVSRLCVYAPSEILKLVNFVDTPGLNSLSKADTAVTHEVL 173
Query: 461 PRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSD 502
V+++ AD SE + + K + +LN+ D
Sbjct: 174 KDVAGVIWLSLADNAARASEAAQIEEFLAGGGKTAICLLNQKD 216
>gi|317055197|ref|YP_004103664.1| dynamin family protein [Ruminococcus albus 7]
gi|315447466|gb|ADU21030.1| Dynamin family protein [Ruminococcus albus 7]
Length = 708
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 29/166 (17%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-------DLASEEQ 414
DE F + IVGE+ GKS++INALLG+ L V+P T + + +S + + E
Sbjct: 52 DEHFEVAIVGEFKRGKSTLINALLGQEVLPADVLPATATLNRVTYSTEPYVQVEYKNGES 111
Query: 415 QRCERHPDGQYICYLPS------PILKEMI-------------IVDTPGTNVILQRQQRL 455
+R E +Y+ L S +KE I+DTPG N Q +
Sbjct: 112 ERVEIDRLEEYVTKLTSESERKAETVKEATVYYDTEFCRNNVDIIDTPGLNDDDQ-MTNV 170
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLN 499
T +P+ D +FVISA+ P ++ E FL + +++FV+N
Sbjct: 171 TMSIIPKIDAAVFVISANSPFSQFEKEFLEKKMLTSDVGRIIFVVN 216
>gi|91775053|ref|YP_544809.1| hypothetical protein Mfla_0700 [Methylobacillus flagellatus KT]
gi|91709040|gb|ABE48968.1| conserved hypothetical protein [Methylobacillus flagellatus KT]
Length = 652
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 14/144 (9%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C R+ + P P+L++ ++I+DTPG N I + LT +P A VLF++SAD
Sbjct: 192 CWRYA----VINFPHPLLEQGLVILDTPGLNAI-GTEPELTLNMLPNAHAVLFILSADTG 246
Query: 476 LTESEV-VFLRYTQ--QWKKK-VVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNI 527
+T+SEV V+ +Y +WK+ + VLNK D L+ +N E+ I+ ++ +LL +
Sbjct: 247 VTKSEVDVWRQYISGTRWKQNGRLAVLNKIDGLWDELRNEAEISREIAKQLASSAELLGL 306
Query: 528 ENVTIYPVSARSTLEAKLSVSSAV 551
E I+P+SA+ L AK++ A+
Sbjct: 307 EQDQIFPISAQKGLLAKIAGDQAL 330
>gi|425462471|ref|ZP_18841945.1| Dynamin family protein [Microcystis aeruginosa PCC 9808]
gi|389824476|emb|CCI26530.1| Dynamin family protein [Microcystis aeruginosa PCC 9808]
Length = 670
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 42/216 (19%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYL-KDGVVPTTNEITFLRFS----------DLA 410
+E +V+ GE+ GKSS+INA + + L V TTN ++ + ++ D+
Sbjct: 43 EEKIYVVVCGEFKQGKSSLINAFIDETNLFPVDVKITTNLVSTIAYAEQEEITVILGDIG 102
Query: 411 SEEQQRCERHPDGQYICYL----------------PSPILKE-MIIVDTPGTNVILQRQQ 453
+ ++ R +Y+ P+P LK+ +++VDTPGT +
Sbjct: 103 QGQTKQINRSEIPEYVTEQKNKSNQKKAKLLMIESPNPYLKDGLVLVDTPGTGSLNAEHT 162
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLR-----YTQQWKKKVVFVLNKSDLYQNAF 508
LT F+P AD +LFV PL ++ F++ + Q ++FVL K D N
Sbjct: 163 ALTYSFIPNADAILFVSDIQAPLKVEDLNFIKERILPHCQ----NIIFVLTKIDAITN-- 216
Query: 509 ELEEAISFVKENTMKLLNI--ENVTIYPVSARSTLE 542
++ I +E LN+ E +++ PVS+++ E
Sbjct: 217 -YQKIIDSNREKLSNSLNLSPEQISLIPVSSKAKQE 251
>gi|452951255|gb|EME56705.1| dynamin [Amycolatopsis decaplanina DSM 44594]
Length = 613
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRC------ 417
+V+VGE N GKSS++NALL G+ P ++ T+L F Q C
Sbjct: 49 VVVVGETNRGKSSLVNALLS----MPGLSPVDADVATATYLVFEHAERWSAQACYPGQLA 104
Query: 418 ----------------ERHPDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
P+GQ Y+ P P+L+ + IVDTPG + L
Sbjct: 105 PVPIDLNDLIHWVSAAHELPEGQIPPRYVEVSGPVPLLERVSIVDTPGVGGLDSMHGELA 164
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
+E A +LFV+ A P T E+ FL + + V+F L K+D ++ E+ EA
Sbjct: 165 KEAAAGATALLFVVDASSPFTAQELQFLHDMGERVETVLFALTKTDQFRGWREVLEADRR 224
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + +PVSAR
Sbjct: 225 LLAEHAPRF---ADAVFHPVSAR 244
>gi|433610132|ref|YP_007042501.1| GTP-binding protein [Saccharothrix espanaensis DSM 44229]
gi|407887985|emb|CCH35628.1| GTP-binding protein [Saccharothrix espanaensis DSM 44229]
Length = 605
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 96/228 (42%), Gaps = 39/228 (17%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRC------ 417
+V+VGE N GKSS++NALL G+ P E+ T+L F A + C
Sbjct: 40 VVVVGETNRGKSSLVNALLAT----PGLSPVDAEVATATYLVFRHGAQWSARACYPGSMS 95
Query: 418 ----------------ERHPDG----QYI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
P+G +Y+ P P+L+ + +VDTPG + L
Sbjct: 96 PVPFDRAELVNWVSAAHELPEGMLPPRYVEVEAPIPLLERLSVVDTPGVGGLESVHGELA 155
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
E A +LFV+ A P T E+ FLR + + VVF L K D Y+ + EA +
Sbjct: 156 AEAAATATALLFVVDASAPFTRGELEFLRTVGERVETVVFALTKVDQYRGWRTVLEADQA 215
Query: 516 FVKENTMKLLNIENVTIYPVSARS-TLEAKLSVSSAVGKDHSELSVND 562
+ E+ + T +PVS+R L AK A G + D
Sbjct: 216 LLAEHAPRF---AGATFHPVSSRMFELAAKAPNPDAAGMLRERSGIGD 260
>gi|390445119|ref|ZP_10232880.1| GTP-binding protein HSR1-related protein [Nitritalea halalkaliphila
LW7]
gi|389663045|gb|EIM74583.1| GTP-binding protein HSR1-related protein [Nitritalea halalkaliphila
LW7]
Length = 539
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT----- 402
ME + +D +++ + P + +VG +++GKSS INALLG L + P T +IT
Sbjct: 1 MEYIHYHLDDIAEGNIPLQVGVVGGFSTGKSSFINALLGDELLGVKIQPATAKITKLVYG 60
Query: 403 -----FLRFSDLAS-----EEQQRCERHPD----------GQYICYLPSPILKEMIIVDT 442
F FSD ++ E QR H D Y+ P+ L + ++DT
Sbjct: 61 DELEIFKVFSDESTEVIDLETYQRLSVHEDKGVTSFRDNIKYYLIKYPNDYLHHINLIDT 120
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
PG + I + LT+ ++ D++L++ A++ ++E+ + +K+ V+NK D
Sbjct: 121 PGFSSISKEDDELTKSYLSNLDVLLWLFDANKVGDKTEIDLINEFGT-GEKIYGVINKID 179
Query: 503 L 503
L
Sbjct: 180 L 180
>gi|374606723|ref|ZP_09679550.1| dynamin, partial [Paenibacillus dendritiformis C454]
gi|374387670|gb|EHQ59165.1| dynamin, partial [Paenibacillus dendritiformis C454]
Length = 619
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 428 YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
+L SP+ +E ++VDTPG + I R +T ++ AD++LFV + ++++ FL
Sbjct: 186 HLDSPLTREGFVLVDTPGADSINARHTGVTFNYMKNADMILFVTYYNHAFSQADRQFLTQ 245
Query: 487 TQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
+ K K+ F++N +DL + ELE +S+V + + I ++PVS+ L
Sbjct: 246 LGRVKDAFELDKMFFLVNAADLAASGEELEGVVSYVSDRLTE-FGIRRPRLFPVSSLRGL 304
Query: 542 EAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIR 601
EA+ LS N W+ + E+ F ++ L E +
Sbjct: 305 EAR-------------LSGNTEEWQASGLAAFEEQFLRF------ASEDLAGLSAEVSRQ 345
Query: 602 IAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMKMESESISW 649
R+LS + L M D A D + + +K+ + E+++ W
Sbjct: 346 ELRRVLS--QLLAMWDA--AHADASERARQAEHIKQAAAECETQACEW 389
>gi|423214170|ref|ZP_17200698.1| hypothetical protein HMPREF1074_02230 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693115|gb|EIY86350.1| hypothetical protein HMPREF1074_02230 [Bacteroides xylanisolvens
CL03T12C04]
Length = 616
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 39/200 (19%)
Query: 340 VIKKASPLMEEVSLLIDAVSQIDEPFL--------LVIVGEYNSGKSSVINALLGKRYLK 391
VI +P++E ++ D++++I E ++I GE+ GKSS +NAL+G+
Sbjct: 12 VITAVTPILERLNRK-DSLAKIQERIRQIQNTEVKVLICGEFKRGKSSFVNALIGRNICP 70
Query: 392 DGVVPTTNEITFLR----------FSDLASEEQQ-------------RCERHPDGQYI-C 427
T+ ++ +R F DL+ ++ R E+ + Y+
Sbjct: 71 VDQDICTSVVSIIRYGDTERVIRYFGDLSHVQKAEIPYADIQKYTVGRAEQVQNTLYLEI 130
Query: 428 YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
LP LK ++++DTPG + R LT F+P+AD+ LF+ + PLT +E+ F Y
Sbjct: 131 ELPLECLKNGLVLIDTPGVGGLDPRHAFLTTYFLPQADITLFMTDVNEPLTTTELDF--Y 188
Query: 487 TQQ---WKKKVVFVLNKSDL 503
Q+ + K ++NK DL
Sbjct: 189 NQKVTRYAKHSAIIINKCDL 208
>gi|385680231|ref|ZP_10054159.1| dynamin [Amycolatopsis sp. ATCC 39116]
Length = 611
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 88/203 (43%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT---FLRFSDLASEEQQRC------ 417
+V+VGE N GKSS++NALL G+ P ++ +L F Q C
Sbjct: 48 VVVVGETNRGKSSLVNALLAT----PGLSPVDADVATAGYLVFDHAPEWGAQACYPGQLA 103
Query: 418 ----------------ERHPDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
PDGQ Y+ P PIL+ + +VDTPG + L
Sbjct: 104 PVAVPLPELVRWVSAAHELPDGQLPPRYVEVTGPVPILERVSLVDTPGVGGLDSMHGELA 163
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
E A +LFV+ A P T E+ FLR + VVF L+K+D ++ E+ EA
Sbjct: 164 AEAAANATALLFVVDASAPFTAGELEFLRRVGDRVETVVFALSKTDAFRGWREVLEADRR 223
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + +PVSAR
Sbjct: 224 LLAEHAPRF---ADAVFHPVSAR 243
>gi|17545119|ref|NP_518521.1| hypothetical protein RSc0400 [Ralstonia solanacearum GMI1000]
gi|17427410|emb|CAD13928.1| putative gtpase (dynamin-related) harboring a t-snare domain
protein [Ralstonia solanacearum GMI1000]
Length = 662
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 211 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 269
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D + E+E I+ T ++L+I+ +YPVSA+
Sbjct: 270 RSHVGGGQRKGCIAVLNKVDGLWDPLKSEREVESEINRQIVTTAQVLDIDVKRVYPVSAQ 329
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 330 KGLLAKVSHDPAL 342
>gi|319789902|ref|YP_004151535.1| GTP-binding protein HSR1-related protein [Thermovibrio ammonificans
HB-1]
gi|317114404|gb|ADU96894.1| GTP-binding protein HSR1-related protein [Thermovibrio ammonificans
HB-1]
Length = 643
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 91/204 (44%), Gaps = 41/204 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT----------FLRFSDLASEEQQR 416
L I+G ++SGKSS+INALLG V PTT+ IT F SD +E +
Sbjct: 74 LTIIGNFSSGKSSIINALLGDDVCAVKVNPTTSSITRFIYGEEERIFQILSDGTKKEISK 133
Query: 417 CERHPDGQY---------ICYL----PSPILKEMIIVDTPGTNVILQRQQRLTEE----- 458
+ Q+ + + PSP+L+ +I+ DTPG + + T+E
Sbjct: 134 EKYLESSQHKISNMEKTEVAFFEYQYPSPLLENIILYDTPG----FENPENKTDEIVTKT 189
Query: 459 -FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKV----VFVLNKSDLYQNAFELEEA 513
F +AD VLFV +P E E R K+K + VLNK+D+ +
Sbjct: 190 VFKEKADAVLFVQDISKPSLE-ETTKKRIETLKKEKADIPWILVLNKADIASEE-NINTV 247
Query: 514 ISFVKENTMKLLNIENVTIYPVSA 537
+SF KEN L N V +Y A
Sbjct: 248 LSFWKENNNGLFN--KVIVYSAKA 269
>gi|421889566|ref|ZP_16320591.1| conserved hypothetical protein, putative nucleoside triphosphate
hydrolases [Ralstonia solanacearum K60-1]
gi|378965088|emb|CCF97339.1| conserved hypothetical protein, putative nucleoside triphosphate
hydrolases [Ralstonia solanacearum K60-1]
Length = 647
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 196 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 254
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D + E+E I+ T ++L+I+ +YPVSA+
Sbjct: 255 RSHVGGGQRKGCIAVLNKVDGLWDPLKSEQEVESEINRQIVTTAQVLDIDVKRVYPVSAQ 314
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 315 KGLLAKVSHDPAL 327
>gi|315638735|ref|ZP_07893908.1| GTP-binding protein [Campylobacter upsaliensis JV21]
gi|315481144|gb|EFU71775.1| GTP-binding protein [Campylobacter upsaliensis JV21]
Length = 609
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 22/101 (21%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF-------------SDLASE- 412
+ I+G+++SGKSS++N +LG+ YL GVVP T + TFL + SD+ +E
Sbjct: 64 IAIIGQFSSGKSSLLNLILGREYLPTGVVPVTFKPTFLHYGKDYILRVEFEDGSDVITEL 123
Query: 413 -------EQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
+Q++ + +I Y P P+LK + +VDTPG N
Sbjct: 124 SELEFYTDQRKSLKEAKSIHI-YAPVPLLKHLSLVDTPGLN 163
>gi|57506244|ref|ZP_00372162.1| probable ATP /GTP binding protein Cj0412 [Campylobacter upsaliensis
RM3195]
gi|57015471|gb|EAL52267.1| probable ATP /GTP binding protein Cj0412 [Campylobacter upsaliensis
RM3195]
Length = 609
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 22/101 (21%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF-------------SDLASE- 412
+ I+G+++SGKSS++N +LG+ YL GVVP T + TFL + SD+ +E
Sbjct: 64 IAIIGQFSSGKSSLLNLILGREYLPTGVVPVTFKPTFLHYGKDYILRVEFEDGSDVIAEL 123
Query: 413 -------EQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
+Q++ + +I Y P P+LK + +VDTPG N
Sbjct: 124 SELEFYTDQRKSLKEAKSIHI-YAPVPLLKHLSLVDTPGLN 163
>gi|386334662|ref|YP_006030833.1| gtpase (dynamin-related) harboring a t-snare domain protein
[Ralstonia solanacearum Po82]
gi|334197112|gb|AEG70297.1| gtpase (dynamin-related) harboring a t-snare domain protein
[Ralstonia solanacearum Po82]
Length = 647
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 196 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 254
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D + E+E I+ T ++L+I+ +YPVSA+
Sbjct: 255 RSHVGGGQRKGCIAVLNKVDGLWDPLKSEQEVESEINRQIVTTAQVLDIDVKRVYPVSAQ 314
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 315 KGLLAKVSRDPAL 327
>gi|422338976|ref|ZP_16419936.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372103|gb|EHG19446.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 206
Score = 62.8 bits (151), Expect = 8e-07, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKD-RALFLIAERVDIAAA 156
G D I+E++ V IV L S K YE A +K + K R LF+I +R+DIA A
Sbjct: 19 GKDLYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKSYRVLFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKD---------SMSESVVLPLVGRNVQTLDAAFNASSS 207
V A GV L +P AR +KD +M E+ + L+G + A F S+
Sbjct: 79 VKADGVHLGQSDMPIEKAREILKDKFLIGATAKNMEEAKKVELLGADYIGSGAIFGTSTK 138
Query: 208 EGADFLVCCFGEGQKADVIE-NSLFTNVKIPIFIMNASPLVDVSKFLKSGASG 259
+ A +K ++ E + T+VKIP+F + + +VS G G
Sbjct: 139 DNA----------KKLEMEELKKIVTSVKIPVFAIGGININNVSLLKNIGLQG 181
>gi|409391918|ref|ZP_11243561.1| hypothetical protein GORBP_081_00770 [Gordonia rubripertincta NBRC
101908]
gi|403198229|dbj|GAB86795.1| hypothetical protein GORBP_081_00770 [Gordonia rubripertincta NBRC
101908]
Length = 464
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 195/486 (40%), Gaps = 100/486 (20%)
Query: 340 VIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
++ + +PL + +L+ +Q+ P + +VG ++GKS+++NAL+G R V T+
Sbjct: 14 LLDEVAPLAPDPALIGSLRAQLANPLTVALVGRVSAGKSTLLNALVGDR------VAPTD 67
Query: 400 EITFLRFSDLASE-EQQRCE--------------------RHPD--GQYICYLPSPILKE 436
+ + L +E QR E R PD + Y PS +L+E
Sbjct: 68 RAECTKVAALYTEGNPQRVEVVGLDGTVTEIPGTMRGDLGRTPDDIDHAVVYTPSRLLRE 127
Query: 437 MI-IVDTPG------TNVILQRQQRLTEEFVPRADLVLFVI-SADRPLTESEVVFLRYTQ 488
++DTPG T I R+ E +PR D+VLF++ A P T+ EV FL
Sbjct: 128 RFRVIDTPGLSGFTDTAEIATRRVFSGEGRLPRPDVVLFLLDDAAGPKTD-EVQFLADAG 186
Query: 489 QWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVS 548
+ + V++ +DL + +A + + I + A S L A+ V
Sbjct: 187 ASAQNTILVISHADLIAADSPMLKAQEIARRVWRRFPAIAGAVV----AVSGLMAEAGVC 242
Query: 549 SAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLS 608
++ +++S R + E L + LDG++ P + LL
Sbjct: 243 GVTERETAQIS------RRGLLESWE--LLTILDGAAP-----------PPPGLDVDLLG 283
Query: 609 SCETLVMKDCQDAKQDLTLANEMIDSLKEYVMK---MESESISWRRKTLSLIDSTKSRVV 665
E LV DA D +A + + E++ + ++ ++ R+ L++ D K+R V
Sbjct: 284 RLEELVGTYAMDAGAD--IARQGARAYCEWLHRVSGIDELRLAIGRRFLAVGDILKARTV 341
Query: 666 --KLIESTLQISNLDI---------VASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKL 714
+L E+ + D+ A + R + AA+ + +R Q D L
Sbjct: 342 LAELREAAYRSPRRDVFLEAIEEAETAPELHRLREVAALEALARWQPD---------SDL 392
Query: 715 LGEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFS 774
+GE + + S++ R L+ L P P K R+ F+
Sbjct: 393 VGELNLVVASRDVR--------------LLLSLPPDAAPPQIADAAKERATDCRMRRAFA 438
Query: 775 ASSTSK 780
A+S K
Sbjct: 439 ATSAEK 444
>gi|357058221|ref|ZP_09119075.1| hypothetical protein HMPREF9334_00792 [Selenomonas infelix ATCC
43532]
gi|355374074|gb|EHG21375.1| hypothetical protein HMPREF9334_00792 [Selenomonas infelix ATCC
43532]
Length = 778
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 162/376 (43%), Gaps = 66/376 (17%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE--------EQQR 416
F +V++GE+++GKS+ +NAL+ KR L TT + FL+ + A R
Sbjct: 52 FSIVLIGEFSAGKSTFLNALMQKRILPSYTRETTATVNFLQHASKAPNGEPGIVYYRDGR 111
Query: 417 CERHPD------GQYIC-------------------YLPSPILKE-MIIVDTPGTNVILQ 450
E PD +Y+ +L S L++ +++VD+PG N I +
Sbjct: 112 TEVLPDLSVDTLTKYVTVGEGEDRNAVSESTERVDLFLASRFLEDGVMLVDSPGLNGITE 171
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD-LYQNAFE 509
+ +T + + +F+ SADRP ++++ LR + ++ VLNK D + N E
Sbjct: 172 NLEDITRRQIKESHASIFMFSADRPGSKTDFDTLRDLRAQCSRIFIVLNKIDAIKANEGE 231
Query: 510 -LEEAISFVKENTMKLLNIENV-TIYPVSARSTL---EAKLSVSSAVGKDHSELSVNDSH 564
+E + +K + + + + IYP+SA L +A KD + + +
Sbjct: 232 SVESVVQHLKNSYAEQFDEATLPEIYPISAHQALVARDADYEDPRQPNKDTAYCARMEEI 291
Query: 565 WRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLL--------SSCETLVMK 616
R++ F E L+ ++ T E+ R +L P+ +L +S E L +
Sbjct: 292 SRLHVF---EDRLWRYI-----TNGEKTREELMAPVHTLLHMLRDERSALDTSIEVLSAQ 343
Query: 617 DCQDAKQDLTLANEMIDSLKEYVMKMESESISWRRKTLSLIDSTKSR--------VVKLI 668
D + + +EM D ++E + +++ R+K ++ + R V ++
Sbjct: 344 HSPD--ELIKQQDEMKDKIEELRREEQAQRSPLRKKFQEVMRDVRERASDYCARVVARVA 401
Query: 669 ESTLQISNLDIVASYV 684
E I + D + +Y
Sbjct: 402 EEAGDIEDADELRAYA 417
>gi|149919805|ref|ZP_01908282.1| probable GTP-binding protein [Plesiocystis pacifica SIR-1]
gi|149819412|gb|EDM78843.1| probable GTP-binding protein [Plesiocystis pacifica SIR-1]
Length = 690
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 44/229 (19%)
Query: 352 SLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI--------- 401
+++ DA ++D+ + VI+GE GKSS++NALLG+ L GV PTT +
Sbjct: 39 TVVADARRRLDDGRVRAVILGEIKHGKSSLLNALLGEALLPVGVTPTTGAVVAIRSAATA 98
Query: 402 -------TFL-------------RFSDLA-SEEQQRCERHPDGQYICYLPSPILKEMIIV 440
T+L RF+ LA + + R P+ + P + + ++
Sbjct: 99 GDGSEPGTYLLEADGGRTPVDAERFATLARGKAEDEAGREPE---LLVDPERLPSAVELI 155
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR--------YTQQWKK 492
DTPG N I + + L+ +PRAD+++ V+ A + L+ SE+ + +
Sbjct: 156 DTPGFNDIDRFRAALSRSELPRADVLVLVLDATQVLSRSELRLITDAVAAVGGLDESGGA 215
Query: 493 KVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
K++ V+N+ DL E E I+ +E +L + IY V ++S L
Sbjct: 216 KLLVVINRIDLVPE-DERERVIAHSREGLSSVLP-GPLDIYCVDSKSAL 262
>gi|71409698|ref|XP_807180.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70871125|gb|EAN85329.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 646
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ----------Q 415
+++++G +++GKS++IN LLG+ + GV PT + T ++ D SEE Q
Sbjct: 178 MVMLLGNHSAGKSTIINYLLGRAVQRTGVAPTDDGFTIIQRGDRDSEEDGPTSLSDPRYQ 237
Query: 416 RCERHPDGQYICY--------LP--SPILKEMIIVDTPGT---------NVILQRQQR-- 454
+ G + + LP S + ++IVDTPG L+ Q R
Sbjct: 238 LQDLQKFGMHFVHRFKVKTRQLPPSSNVPYGLMIVDTPGMIDTPVHVKDRTSLEGQLRGY 297
Query: 455 ----LTEEFVPRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQNAF 508
T F R D++L V P T E V + ++ K + V+NK D++ A
Sbjct: 298 DFLAATRWFASRCDVILLVFDPANPGTTGETLDVLTKSLAGFEHKFLLVMNKVDMFDKAT 357
Query: 509 ELEEAISFVKENTMKLLNIENV-----TIYPVSARST--LEAKLSVSSAV 551
+ + + N K++ ++++ T PV ST LEA ++S++
Sbjct: 358 DFGRSYGALCWNLSKVIEMKDIPRIYTTFIPVKTASTEELEATTPLASSL 407
>gi|451340461|ref|ZP_21910956.1| hypothetical protein C791_8432 [Amycolatopsis azurea DSM 43854]
gi|449416760|gb|EMD22473.1| hypothetical protein C791_8432 [Amycolatopsis azurea DSM 43854]
Length = 613
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFLRFSDLASEEQQRC------ 417
+V+VGE N GKSS++NALL G+ P ++ T+L F Q C
Sbjct: 49 VVVVGETNRGKSSLVNALLS----MPGLSPVDADVATATYLVFEHAEQWSAQACYPGQLA 104
Query: 418 ----------------ERHPDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
P+GQ Y+ P P+L+ + IVDTPG + L
Sbjct: 105 PVPINLNDLIHWVSAAHELPEGQIPPRYVEVSGPVPLLERVSIVDTPGVGGLDSMHGVLA 164
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-IS 515
+E A +LFV+ A P T E+ FL + + V+F L K+D ++ E+ EA
Sbjct: 165 KEAAAGATALLFVVDASSPFTAPELQFLHDMGERVETVLFALTKTDQFRGWREVLEADRR 224
Query: 516 FVKENTMKLLNIENVTIYPVSAR 538
+ E+ + + +PVSAR
Sbjct: 225 LLAEHAPRF---ADAVFHPVSAR 244
>gi|402300273|ref|ZP_10819794.1| GTP1/OBG family GTPase [Bacillus alcalophilus ATCC 27647]
gi|401724570|gb|EJS97919.1| GTP1/OBG family GTPase [Bacillus alcalophilus ATCC 27647]
Length = 1198
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLA---SEEQQRCERHP 421
F + G +++GKS+++N LLG L +PT+ I ++ +L + Q+ ++
Sbjct: 37 FEIAFCGHFSAGKSTIMNTLLGAEVLPTSPIPTSANIVSIQQGELGVSVTSSDQKIKKWT 96
Query: 422 -------------DGQYIC----YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
DG I Y P P L ++ DTPG + Q++T E + D
Sbjct: 97 GDIPWEQIRKWGMDGHNITDMRIYAPLPFLSNSVVYDTPGIDSTDPTHQKMTVEALYTTD 156
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK-----E 519
L+++V+ + +E+ + FL+ + K ++ V+N+ D + + + +SF +
Sbjct: 157 LIVYVMEYNHVQSETNLYFLKQLSEEHKPLMLVINQVDKHND-----QELSFAQFDSSVR 211
Query: 520 NTMKLLNIENVTIYPVSAR 538
T K IE + +Y S +
Sbjct: 212 ETFKNWKIEFLDLYYTSMK 230
>gi|441512537|ref|ZP_20994378.1| hypothetical protein GOAMI_09_00620 [Gordonia amicalis NBRC 100051]
gi|441452689|dbj|GAC52339.1| hypothetical protein GOAMI_09_00620 [Gordonia amicalis NBRC 100051]
Length = 464
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 178/433 (41%), Gaps = 84/433 (19%)
Query: 340 VIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
++ + +PL + +++ +Q+ P + +VG ++GKS+++NAL+G R V T+
Sbjct: 14 LLDEVTPLAPDATVIGSLRAQLANPLTVALVGRVSAGKSTLLNALVGDR------VAPTD 67
Query: 400 EITFLRFSDLASE-EQQRCE--------------------RHPD--GQYICYLPSPILKE 436
+ + L +E QR E R PD + + PS +L+E
Sbjct: 68 RAECTKVAALYTEGNPQRVEVVGLDGTVTEIPGTMRGDLGRRPDDIDHAVVHTPSRLLRE 127
Query: 437 MI-IVDTPG------TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
++DTPG T I R+ E +PR D++LF++ EV FL
Sbjct: 128 RFRVIDTPGLSGFTDTAEIATRRVFSGESRLPRPDVILFLLDDAAGPKSDEVAFLSDAGA 187
Query: 490 WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSS 549
+ + V++ +DL + +A + + I + A S L A+ V
Sbjct: 188 SAQNTILVISHADLIAADNPMLKAQEIARRVWRRFPAIAGAVV----AVSGLMAEAGVCG 243
Query: 550 AVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSS 609
++ +++S R + E L S LDG++ P + LL
Sbjct: 244 VTERETAQIS------RRGALESWE--LLSILDGAAP-----------PPPGLDVDLLGR 284
Query: 610 CETLVMKDCQDAKQDLTLANEMIDSLKEYVMK---MESESISWRRKTLSLIDSTKSRVV- 665
E LV DA D +A + + E++ + ++ ++ R+ L++ D K+R V
Sbjct: 285 LEELVGTYAMDAGAD--VAGQGARAYCEWLHRVSGIDELRLAIGRRFLAVGDILKARTVL 342
Query: 666 -KLIESTLQISNLDI---------VASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLL 715
+L E+ + + D A + R + AA+ + +R Q D +L+
Sbjct: 343 AELREAAYRSARRDAFLEAIEEAETAPELHRVREVAALEALARWQPD---------SELI 393
Query: 716 GEYTMWLQSKNAR 728
GE + + S++ R
Sbjct: 394 GELNLVVASRDVR 406
>gi|406934737|gb|EKD68930.1| hypothetical protein ACD_47C00358G0002 [uncultured bacterium]
Length = 631
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 28/142 (19%)
Query: 360 QIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR------------- 405
Q DE F+ LV+ GEYNSGKSSVIN++LG++ + G P T ++ +
Sbjct: 50 QKDEVFVNLVVAGEYNSGKSSVINSILGEKIIPVGAEPMTLAVSIFKYGERQKILIEFED 109
Query: 406 --FSDLASEEQQRCERHPDGQ---------YICY-LPSPILKEMIIVDTPGTNVILQR-- 451
F +++SEE ++ + + YI + P P L ++ I+DTPG + +
Sbjct: 110 ETFREISSEEFEKLKHTSKNELDMDVSKIKYIHFHYPEPYLNKVNIIDTPGFSTATEAGD 169
Query: 452 QQRLTEEFVPRADLVLFVISAD 473
++ + + +AD++L+V +A+
Sbjct: 170 DKKTKDAILHKADVLLWVFNAN 191
>gi|405351533|ref|ZP_11022951.1| hypothetical protein A176_5419 [Chondromyces apiculatus DSM 436]
gi|397092834|gb|EJJ23566.1| hypothetical protein A176_5419 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 565
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 328 ETERSVLLEAIDVIKKASPLMEEVSLLID----AVSQIDEPFLLVIVGEYNSGKSSVINA 383
E RS+L A++ + P + L+D V++ D P + +VG +GKS+++NA
Sbjct: 10 EALRSLLKTALE-LPALRPHATRLERLVDDYARGVARKDAPLTVALVGATGAGKSTLLNA 68
Query: 384 LLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSP--ILKEMIIV 440
L G+ ++GV PT+ T A+E + + Y P P + + +
Sbjct: 69 LAGQALSREGVNRPTSTVATVFAPEGTATEALAGS----GARVVTYAPGPQGLWGGQVFI 124
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
DTP N + + + + RAD+ L V+ ++V FL Q ++ +VF+LN
Sbjct: 125 DTPDLNSVATTHREVARAALERADVALVVMHRGSVAEATQVEFLTEFAQ-RRALVFILNF 183
Query: 501 SDLYQNAFELEE-AISFVKENTMKL------LNIENVTIYPVSA 537
+D EL E + +K KL L E+V ++ +SA
Sbjct: 184 AD------ELSETSRDTLKAQVRKLASEQYGLAQEDVPVFAISA 221
>gi|134103690|ref|YP_001109351.1| dynamin [Saccharopolyspora erythraea NRRL 2338]
gi|291004775|ref|ZP_06562748.1| dynamin [Saccharopolyspora erythraea NRRL 2338]
gi|133916313|emb|CAM06426.1| dynamin [Saccharopolyspora erythraea NRRL 2338]
Length = 619
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 30/199 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK--DGVVPTTNEITFL---RFSDLASEEQQR----- 416
+V+VGE N GKSS++NALL + D V T + F +++ LA Q+
Sbjct: 53 VVVVGETNRGKSSLVNALLESPGMSPVDAGVATATYLQFQYGEQWAGLACYPGQQEPVAF 112
Query: 417 -----------CERHPDGQ----YI-CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
PDGQ Y+ P L ++ +VDTPG + L E
Sbjct: 113 PIAELPAWSAVGHELPDGQLPPRYVRVEAPLEALSKLTVVDTPGVGGLDSVHGELALEAA 172
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFE-LEEAISFVKE 519
A +LFV+ A P T E+ FLR + VVF L K+D ++ + LEE + E
Sbjct: 173 ASATALLFVVDASAPFTRGELDFLRTVGDRVETVVFALAKTDQHRGWRQVLEEDRRLLAE 232
Query: 520 NTMKLLNIENVTIYPVSAR 538
+ + +V IYPVSAR
Sbjct: 233 HAPRF---ADVPIYPVSAR 248
>gi|134096048|ref|YP_001101123.1| hypothetical protein HEAR2888 [Herminiimonas arsenicoxydans]
gi|133739951|emb|CAL63002.1| Conserved hypothetical protein, putative GTPase [Herminiimonas
arsenicoxydans]
Length = 646
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
LA +E E I P P+LK+ ++I+DTPG N I + LT +P A VL
Sbjct: 178 LAVDENGMVEISQWRHAIVNFPHPLLKQGLVIIDTPGLNAI-GTEPELTLNLIPNAHAVL 236
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKV-------VFVLNKSDLYQNAF----ELEEAISF 516
F+++AD +T+S++ W+ + + VLNK D + E+E+ I
Sbjct: 237 FILAADTGVTKSDIDI------WRNHIGGTGAGRMVVLNKIDSMWDELRTPGEVEQQIDM 290
Query: 517 VKENTMKLLNIENVTIYPVSARSTLEAKLSVSS 549
N ++L I I+PVSA+ L K++V +
Sbjct: 291 QVGNVAQILGIPQRQIFPVSAQKGLVGKINVDA 323
>gi|410453901|ref|ZP_11307844.1| dynamin family protein [Bacillus bataviensis LMG 21833]
gi|409932581|gb|EKN69539.1| dynamin family protein [Bacillus bataviensis LMG 21833]
Length = 1224
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 394 VVPTTNEITFLRFSDLASEEQQRCE-RHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQ 452
V+ T E F + ++E++ C + Y C L K + +VDTPG + I R
Sbjct: 760 VLGTLLETDLDDFQEFVAKEEKSCYVEWIELYYDCELTQ---KGITLVDTPGADSINARH 816
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFL----RYTQQWK-KKVVFVLNKSDLYQNA 507
+ +++ +D +LFV + ++++ FL R + ++ K+ F++N DL +N
Sbjct: 817 TGVAFDYIKNSDAILFVTYYNHAFSKADREFLIQLGRVKESFQMDKMFFIINAIDLAEND 876
Query: 508 FELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRI 567
E E +V E MK I N +YPVS+ ++ KL+V+ AV
Sbjct: 877 EEQETVSDYVAEQLMK-YGIRNPHLYPVSSLLAIKEKLNVTPAVN--------------- 920
Query: 568 NTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQD 624
+ + E+ Y F+ + E I AER LS LV K Q + +D
Sbjct: 921 SGMGQFEEKFYHFISNDLT----------EMSISAAERELSRVNELVGKLIQSSNED 967
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD-----LASEEQQRCER 419
FL+ G +++GKS++IN ++G++ L +PT+ + ++ + ++ R
Sbjct: 49 FLIAFCGHFSAGKSTMINQVVGEKLLPSSPIPTSANLVKVKSGEDYAKVFFKNDKPRLYL 108
Query: 420 HP-----------DGQY-----ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA 463
P DG I + S + +I+DTPG + + TE + A
Sbjct: 109 APYDYEIVKNFCKDGDKIEELEISHSDSRLPSNTVIMDTPGIDSADDAHRIATESAIHLA 168
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
DL+ +V+ + E +F + + K V V+N+ D +++
Sbjct: 169 DLIFYVMDYNHVQAELNFLFTKELSEAGKDVYLVINQIDKHKD 211
>gi|390935343|ref|YP_006392848.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570844|gb|AFK87249.1| Thiamine-phosphate pyrophosphorylase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 209
Score = 62.4 bits (150), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG D D ++EA+ V ++ L + S K YE A LK + ++ F+I +R+DIA
Sbjct: 19 AGRDFYDAVEEALKNGVTMLQLREKDVSSKEFYEIAKRLKDIAAKYSIPFIINDRIDIAL 78
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
+V+A GV L + LP +AR + D ++G + +D A A +GAD++
Sbjct: 79 SVDADGVHLGQEDLPCSIARKILGDD-------KIIGISAGCVDEAVKA-EKDGADYIGA 130
Query: 214 VCCFGEGQKADVIENSLFTN-------VKIPIFIMNASPLVDVSKFLKSGASGFVISLE 265
F G K D+ E N V IP+ + + +K+G G + E
Sbjct: 131 GAVFYTGTKKDIGEAIGLLNLEKIKKAVNIPVVAIGGIKYSNAQDVMKTGVDGISVVSE 189
>gi|299068041|emb|CBJ39255.1| conserved protein of unknown function, putative nucleoside
triphosphate hydrolases [Ralstonia solanacearum CMR15]
Length = 647
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 196 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 254
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R +K + VLNK D + E+E ++ T ++L+I+ +YPVSA+
Sbjct: 255 RSHVGGGQRKGCIAVLNKVDGLWDPLKSEREVEAEVNRQIVTTAQVLDIDVKRVYPVSAQ 314
Query: 539 STLEAKLSVSSAV 551
L AK+S A+
Sbjct: 315 KGLLAKVSHDPAL 327
>gi|297539273|ref|YP_003675042.1| hypothetical protein M301_2096 [Methylotenera versatilis 301]
gi|297258620|gb|ADI30465.1| conserved hypothetical protein [Methylotenera versatilis 301]
Length = 656
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 80/136 (58%), Gaps = 11/136 (8%)
Query: 421 PDGQY-ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
P +Y + P P+L++ ++I+DTPG N I + LT +P A VLF+++AD +T+
Sbjct: 195 PSWRYAMINFPHPLLEQGLVILDTPGLNAI-GTEPELTLNMLPNAHAVLFILAADTGVTK 253
Query: 479 SEV-VFLRYTQ--QWKKK-VVFVLNKSDLYQNAFELEEAIS--FVKE--NTMKLLNIENV 530
SE+ V+ +Y +WK+K + VLNK D + + EE I K+ ++ LL +E
Sbjct: 254 SEIDVWRQYISGTRWKQKGRLAVLNKIDGLWDELKDEEEIQKELTKQIKSSADLLGLETN 313
Query: 531 TIYPVSARSTLEAKLS 546
I+P+SA+ L AK++
Sbjct: 314 QIFPISAQKGLLAKVN 329
>gi|383779319|ref|YP_005463885.1| hypothetical protein AMIS_41490 [Actinoplanes missouriensis 431]
gi|381372551|dbj|BAL89369.1| hypothetical protein AMIS_41490 [Actinoplanes missouriensis 431]
Length = 585
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK--DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
+V+VGE GKSS+INALLG L D V T + F+ A+ PDG
Sbjct: 43 VVVVGETKRGKSSLINALLGVPGLSPVDAAVTTAAYLDFVPGDTFAARAWL-----PDGA 97
Query: 425 YI-------------------CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADL 465
+ P+P+L+ + ++DTPG + + V RA
Sbjct: 98 EVPVDDLNEWATGKRRARRIEVTHPAPLLRYLSLLDTPGAGGLDPAHATIALAAVRRATA 157
Query: 466 VLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+LFV A PL++ E+ FL + VVF L K D Y
Sbjct: 158 LLFVADASAPLSKPELDFLAAATERVDAVVFALTKIDAY 196
>gi|300787045|ref|YP_003767336.1| dynamin [Amycolatopsis mediterranei U32]
gi|299796559|gb|ADJ46934.1| dynamin family protein [Amycolatopsis mediterranei U32]
Length = 613
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 351 VSLLIDAVSQIDEPFLLV-IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI-----TFL 404
V L DA + EP + V +VGE+ GKSS+INALL + + P ++I T +
Sbjct: 31 VQRLTDARRLLSEPDVTVYVVGEFKQGKSSLINALLTAK-----ICPVDDDIATAVPTVV 85
Query: 405 RFS----DLASEEQQRCERHPDGQYICY--LPSPI-----------LKE----------- 436
R++ LA+ E P + I LP+ + LK
Sbjct: 86 RYAPESGALATYEPADPSSPPWTERISLEDLPAHVSEAGNPGNVRRLKSVTASISRQLLS 145
Query: 437 --MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKV 494
+++VDTPG + +T +PRA VLF+ A + LT +E+ FLR ++ V
Sbjct: 146 GGLVLVDTPGVGGLGSLHNAVTVSSLPRAHAVLFLSDASQELTGAELRFLRTVKELCPAV 205
Query: 495 VFVLNKSDLY 504
FVL K DLY
Sbjct: 206 FFVLTKIDLY 215
>gi|384150387|ref|YP_005533203.1| dynamin [Amycolatopsis mediterranei S699]
gi|399538928|ref|YP_006551590.1| dynamin [Amycolatopsis mediterranei S699]
gi|340528541|gb|AEK43746.1| dynamin [Amycolatopsis mediterranei S699]
gi|398319698|gb|AFO78645.1| dynamin [Amycolatopsis mediterranei S699]
Length = 613
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 351 VSLLIDAVSQIDEPFLLV-IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI-----TFL 404
V L DA + EP + V +VGE+ GKSS+INALL + + P ++I T +
Sbjct: 31 VQRLTDARRLLSEPDVTVYVVGEFKQGKSSLINALLTAK-----ICPVDDDIATAVPTVV 85
Query: 405 RFS----DLASEEQQRCERHPDGQYICY--LPSPI-----------LKE----------- 436
R++ LA+ E P + I LP+ + LK
Sbjct: 86 RYAPESGALATYEPADPSSPPWTERISLEDLPAHVSEAGNPGNVRRLKSVTASISRQLLS 145
Query: 437 --MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKV 494
+++VDTPG + +T +PRA VLF+ A + LT +E+ FLR ++ V
Sbjct: 146 GGLVLVDTPGVGGLGSLHNAVTVSSLPRAHAVLFLSDASQELTGAELRFLRTVKELCPAV 205
Query: 495 VFVLNKSDLY 504
FVL K DLY
Sbjct: 206 FFVLTKIDLY 215
>gi|313201750|ref|YP_004040408.1| hypothetical protein MPQ_2019 [Methylovorus sp. MP688]
gi|312441066|gb|ADQ85172.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 649
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 86/144 (59%), Gaps = 14/144 (9%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C R+ + P P+L++ ++I+DTPG N I + LT +P A VLF+++AD
Sbjct: 187 CWRYA----VINFPHPLLEQGLVILDTPGLNAI-GTEPELTLNMLPNAHAVLFILAADTG 241
Query: 476 LTESEV-VFLRYTQ--QWKKK-VVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNI 527
+T+SE+ V+ +Y +WK+K + VLNK D L+ +++ +E+ I + + +LL +
Sbjct: 242 VTKSEIDVWRQYISGTRWKQKGRLAVLNKIDGLWDELKDSQSIEDEIKKQVQTSAELLGL 301
Query: 528 ENVTIYPVSARSTLEAKLSVSSAV 551
+ I+P+SA+ L AK++ +A+
Sbjct: 302 DAGQIFPISAQKGLLAKVNGDAAL 325
>gi|427399535|ref|ZP_18890773.1| hypothetical protein HMPREF9710_00369 [Massilia timonae CCUG 45783]
gi|425721297|gb|EKU84210.1| hypothetical protein HMPREF9710_00369 [Massilia timonae CCUG 45783]
Length = 632
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I LP P+LK+ ++I+DTPG N I + LT +P A VLFV++AD +T S++
Sbjct: 191 IINLPHPLLKQGLVILDTPGLNAI-GTEPELTLNLIPNAHAVLFVLAADTGVTRSDIDVW 249
Query: 485 RYTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSARST 540
R + VLNK D + ++ I+ + + +LL ++ +YPVSA
Sbjct: 250 RTHIGAGPGRLAVLNKIDAMWDELTSSSSVDAEIARQQHDVARLLGLDAGQVYPVSAHKA 309
Query: 541 LEAKLS 546
L ++
Sbjct: 310 LVGRIG 315
>gi|253999702|ref|YP_003051765.1| hypothetical protein Msip34_1996 [Methylovorus glucosetrophus
SIP3-4]
gi|253986381|gb|ACT51238.1| conserved hypothetical protein [Methylovorus glucosetrophus SIP3-4]
Length = 654
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 86/144 (59%), Gaps = 14/144 (9%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C R+ + P P+L++ ++I+DTPG N I + LT +P A VLF+++AD
Sbjct: 192 CWRYA----VINFPHPLLEQGLVILDTPGLNAI-GTEPELTLNMLPNAHAVLFILAADTG 246
Query: 476 LTESEV-VFLRYTQ--QWKKK-VVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNI 527
+T+SE+ V+ +Y +WK+K + VLNK D L+ +++ +E+ I + + +LL +
Sbjct: 247 VTKSEIDVWRQYISGTRWKQKGRLAVLNKIDGLWDELKDSQSIEDEIKKQVQTSAELLGL 306
Query: 528 ENVTIYPVSARSTLEAKLSVSSAV 551
+ I+P+SA+ L AK++ +A+
Sbjct: 307 DAGQIFPISAQKGLLAKVNGDAAL 330
>gi|393775380|ref|ZP_10363694.1| hypothetical protein MW7_0354 [Ralstonia sp. PBA]
gi|392717957|gb|EIZ05517.1| hypothetical protein MW7_0354 [Ralstonia sp. PBA]
Length = 643
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 421 PDGQY-ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
P +Y I LP+P+L + ++++DTPG N L + LT +P A +V+FV++AD +T+
Sbjct: 187 PRWRYAIANLPNPLLGQGLVVIDTPGLNA-LGTEPELTLRLLPDAHVVVFVLAADTGVTQ 245
Query: 479 SEVVFLR--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTI 532
S++ + + + + VLNK D + E E + E T + L ++ +
Sbjct: 246 SDLELWQTHVAHAQRARCLVVLNKIDGLWDPLKPHDEAEAELRAQVEATAQALGVDVAQV 305
Query: 533 YPVSARSTLEAKLSVSSAV 551
YPVSA+ L A++S +A+
Sbjct: 306 YPVSAQKGLVARVSGDAAL 324
>gi|262066146|ref|ZP_06025758.1| thiamine-phosphate diphosphorylase [Fusobacterium periodonticum
ATCC 33693]
gi|291380120|gb|EFE87638.1| thiamine-phosphate diphosphorylase [Fusobacterium periodonticum
ATCC 33693]
Length = 206
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR-ALFLIAERVDIAAA 156
G D I+EA+ GIV L S K +YE A +K + K+ ALF+I +R DIA A
Sbjct: 19 GKDFYACIEEAIKGGAGIVQLREKNISTKDLYEKALKVKEICKNYGALFIINDRFDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VGADGVHLGQSDMPIEKAREILKDKF-------LIGATARNVEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASG 259
FG K + + + +VKIP+F + + +V G G
Sbjct: 131 AIFGTNTKDNAKKLEMEELKKIVASVKIPVFAIGGININNVGSLKNIGLQG 181
>gi|188591114|ref|YP_001795714.1| hypothetical protein RALTA_A0322 [Cupriavidus taiwanensis LMG
19424]
gi|170938008|emb|CAP62992.1| conserved hypothetical protein; putative nucleoside triphosphate
hydrolase domain [Cupriavidus taiwanensis LMG 19424]
Length = 650
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 198 VINFPHPLLRQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 256
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R ++ + VLNK D + E+ + I+ T ++L IE +YPVSA+
Sbjct: 257 RSHVGAGHRRGCLAVLNKIDGLWDPLRQPGEIAQEIARQVSTTAQVLGIEQSRVYPVSAQ 316
Query: 539 STLEAKLSVSSAV 551
L AK++ A+
Sbjct: 317 KGLVAKVTHDDAL 329
>gi|443309629|ref|ZP_21039329.1| small GTP-binding protein domain protein [Synechocystis sp. PCC
7509]
gi|442780329|gb|ELR90522.1| small GTP-binding protein domain protein [Synechocystis sp. PCC
7509]
Length = 454
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 89/168 (52%), Gaps = 29/168 (17%)
Query: 339 DVIKKASPLMEEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPT 397
D++KK P E+++L +++++D + + G + GKS+V+NALLG++ L+ G P
Sbjct: 46 DLLKKLKP---ELTVLNSSLNKLDSNVIAIAAFGLVSRGKSAVLNALLGQKILQTG--PL 100
Query: 398 TNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLT 456
+ R + ++ + E ++DTPG + I + + ++
Sbjct: 101 NGVTQWCRSVQWVANDKIQVE--------------------LIDTPGLDEIDGEARSQMA 140
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
E+ +ADL+LF+++ D +T++E L +Q++K ++ V NK DLY
Sbjct: 141 EDVARQADLILFIVAGD--ITQTEYQALCNLRQYQKPLILVFNKIDLY 186
>gi|359414276|ref|ZP_09206741.1| GTP-binding protein HSR1-related protein [Clostridium sp. DL-VIII]
gi|357173160|gb|EHJ01335.1| GTP-binding protein HSR1-related protein [Clostridium sp. DL-VIII]
Length = 605
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 31/175 (17%)
Query: 337 AIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVP 396
+D+IK ++ + L+ D + I+ +V++GE +SGKS++IN L K+ L + V P
Sbjct: 17 VVDIIKNDGIRVQNL-LVKDRI--INPSHYIVMLGETSSGKSALINTLFDKKILAESVKP 73
Query: 397 TTNEITFL-------------------------RFSDLASEEQQRCERHPDGQYICYLPS 431
TT +T + +FS L R +YI +
Sbjct: 74 TTGIVTEVVVDGNSEETLVAINNDLSIEILDNDKFSTLTLNPHDNINRL---RYIGACKN 130
Query: 432 PILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
M I DTPG +++R + + +EF+P +D +++V+S + + + FL+Y
Sbjct: 131 EKYNGMRIFDTPGYGSLIERHEEILKEFIPESDFIVYVVSYRTGIGDDDFQFLKY 185
>gi|448637732|ref|ZP_21675911.1| thiamine-phosphate pyrophosphorylase [Haloarcula sinaiiensis ATCC
33800]
gi|445764105|gb|EMA15267.1| thiamine-phosphate pyrophosphorylase [Haloarcula sinaiiensis ATCC
33800]
Length = 211
Score = 61.6 bits (148), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG +++ EA+ VG+V L + + YE L+ + ++ + F++ +R+D+A
Sbjct: 16 AGRTTDEIVAEAIESGVGVVQLREKNRTARERYELGQELRELTREAGVTFVVNDRIDLAQ 75
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
A++A GV L D LP VAR+ + D ++GR+V T++ A A+++ GAD+L
Sbjct: 76 AIDADGVHLGDDDLPVSVARDILGDD-------AVIGRSVSTVEDAREAATA-GADYLGV 127
Query: 214 VCCFGEGQKADV 225
F G K D+
Sbjct: 128 GAVFATGSKDDI 139
>gi|325681007|ref|ZP_08160539.1| dynamin family [Ruminococcus albus 8]
gi|324107236|gb|EGC01520.1| dynamin family [Ruminococcus albus 8]
Length = 701
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 33/168 (19%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT---NEITFLR------------- 405
DE F + IVGE+ GKS++INALLG+ L V+P T N +T+
Sbjct: 52 DEHFEVAIVGEFKRGKSTLINALLGQEVLPADVLPATATLNRVTYSTEPYVQVEYKNGDS 111
Query: 406 -----------FSDLASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQ 453
+ L SE +++ E + Y + + + I+DTPG N Q
Sbjct: 112 ERVDIDRLEEYVTKLTSESERKAETVKEA--TVYYDTEFCRNNVDIIDTPGLNDDDQ-MT 168
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLN 499
+T +P+ D +FVISA+ P ++ E FL + +++FV+N
Sbjct: 169 NVTMSIIPKIDAAVFVISANSPFSQFEKEFLEKKMLTSDVGRIIFVVN 216
>gi|253997182|ref|YP_003049246.1| hypothetical protein Mmol_1815 [Methylotenera mobilis JLW8]
gi|253983861|gb|ACT48719.1| conserved hypothetical protein [Methylotenera mobilis JLW8]
Length = 654
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 14/144 (9%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C R+ + P P+L++ ++I+DTPG N I + LT +P A VLF+++AD
Sbjct: 192 CWRYA----MINFPHPLLEQGLVILDTPGLNAI-GTEPELTLNMLPNAHAVLFILAADTG 246
Query: 476 LTESEV-VFLRYTQ--QWKKK-VVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNI 527
+T+SE+ V+ +Y +WK+K + VLNK D L+ ++ E++ ++ + + LL +
Sbjct: 247 VTKSEIDVWRQYISGTRWKQKGRLAVLNKIDGLWDELKDEAEIQAELTKQIKTSADLLGL 306
Query: 528 ENVTIYPVSARSTLEAKLSVSSAV 551
+ IYPVSA+ L AK++ A+
Sbjct: 307 DTNHIYPVSAQKGLLAKVNSDEAL 330
>gi|158521097|ref|YP_001528967.1| hypothetical protein Dole_1083 [Desulfococcus oleovorans Hxd3]
gi|158509923|gb|ABW66890.1| hypothetical protein Dole_1083 [Desulfococcus oleovorans Hxd3]
Length = 494
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ-RC 417
S+I L++I+G Y+SGKS++IN LG G PT + T L + A +E R
Sbjct: 48 SKIKWRPLVLIIGNYSSGKSTLINDFLGADIQATGQAPTDDSFTVLTCDETALDEDGIRV 107
Query: 418 ERHPDGQYI----------------------CY--LPSPILKEMIIVDTPGT-NVILQRQ 452
H DG+Y+ C + SP LK I+DTPG + I +R
Sbjct: 108 TEHRDGKYLLANQEFPFEGMKRHGQQFASHFCLKKVNSPFLKNFAIIDTPGMLDSITERD 167
Query: 453 -----QRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYT---QQWKKKVVFVLNKSD 502
Q + + ADLVL + + T E + LR T ++ +V+FVLN+ D
Sbjct: 168 RGYNYQEVVGDLAHIADLVLVMFDPHKAGTVREAHISLRDTLPAHTFEDRVLFVLNRID 226
>gi|223040057|ref|ZP_03610338.1| GTP-binding protein [Campylobacter rectus RM3267]
gi|222878643|gb|EEF13743.1| GTP-binding protein [Campylobacter rectus RM3267]
Length = 611
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
+ P + +G+++SGKS+ +NALLG L G+ P T++ TF+R+
Sbjct: 54 LSSPLTVATLGQFSSGKSTFLNALLGSEILPSGLTPVTSKPTFIRYGAAPALSVLYENGR 113
Query: 409 ---LASEE-----QQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
L EE QR + Y PS ILK + VDTPG N + + +T E +
Sbjct: 114 ELYLGVEEIGRFADQRVFGDEVSRLCVYAPSEILKLVNFVDTPGLNSLSKADTAVTHEVL 173
Query: 461 PRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSDLYQN 506
V+++ AD SE + + K + +LN+ D N
Sbjct: 174 KDVAGVIWLSLADNAARASEATQIEEFLADGGKTAICLLNQKDKLSN 220
>gi|407426828|gb|EKF39724.1| hypothetical protein MOQ_000044 [Trypanosoma cruzi marinkellei]
Length = 469
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ----------Q 415
+++++G +++GKS++IN LLG+ + GV PT + T ++ D S+E Q
Sbjct: 1 MVMLLGNHSAGKSTIINYLLGRAVQRTGVAPTDDGFTIIQRGDRDSDEDGPTSLSDPRYQ 60
Query: 416 RCERHPDGQYICY--------LP--SPILKEMIIVDTPGT---------NVILQRQQR-- 454
+ G + + LP S + ++IVDTPG L+ Q R
Sbjct: 61 LHDLQKFGMHFVHRFKVKTRQLPPSSNVPYGLMIVDTPGMIDTPVHVKDRTSLEGQLRGY 120
Query: 455 ----LTEEFVPRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQNAF 508
T F R D++L V P T E V + ++ K + V+NK D++ A
Sbjct: 121 DFLAATRWFASRCDVILLVFDPANPGTTGETLDVLTKSLAGFEHKFLLVMNKVDMFDKAT 180
Query: 509 ELEEAISFVKENTMKLLNIENV-----TIYPVSARST--LEAKLSVSSAV 551
+ + + N K++ ++++ T PV +T LEA ++S++
Sbjct: 181 DFGRSYGALCWNLSKVIEMKDIPRIYTTFIPVKTAATEELEAATPLASSL 230
>gi|448654874|ref|ZP_21681726.1| thiamine-phosphate pyrophosphorylase [Haloarcula californiae ATCC
33799]
gi|445765323|gb|EMA16461.1| thiamine-phosphate pyrophosphorylase [Haloarcula californiae ATCC
33799]
Length = 211
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG +++ EA+ VG+V L + + YE L+ + ++ + F++ +R+D+A
Sbjct: 16 AGRTTDEIVAEAIEGGVGVVQLREKNRTARERYELGQELRELTREAGVTFVVNDRIDLAQ 75
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
A++A GV L D LP VAR+ + D ++GR+V T++ A A+++ GAD+L
Sbjct: 76 AIDADGVHLGDDDLPVSVARDILGDD-------AVIGRSVSTVEDAREAATA-GADYLGV 127
Query: 214 VCCFGEGQKADV 225
F G K D+
Sbjct: 128 GAVFATGSKDDI 139
>gi|422316918|ref|ZP_16398293.1| thiamine-phosphate pyrophosphorylase [Fusobacterium periodonticum
D10]
gi|404590438|gb|EKA92841.1| thiamine-phosphate pyrophosphorylase [Fusobacterium periodonticum
D10]
Length = 206
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR-ALFLIAERVDIAAA 156
G D I+EA+ V IV L S K YE A +K + K+ ALF+I +R+DIA A
Sbjct: 19 GKDFCACIEEAIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGALFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VGADGVHLGQSDMPIEKAREILKDKF-------LIGATARNVEEAKRAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASG 259
FG K + + + +VKIP+F + + +VS G G
Sbjct: 131 AIFGTDTKDNAKKLEMEELKKIVASVKIPVFAIGGININNVSSLKNIGLQG 181
>gi|294783414|ref|ZP_06748738.1| thiamine-phosphate diphosphorylase [Fusobacterium sp. 1_1_41FAA]
gi|294480292|gb|EFG28069.1| thiamine-phosphate diphosphorylase [Fusobacterium sp. 1_1_41FAA]
Length = 206
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 80 EIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVV 139
E+K + L + L G D I+EA+ V IV L S K YE A +K +
Sbjct: 2 ELKACKIYLVTDEKACL-GKDFYVCIEEAIKGGVKIVQLREKNISTKDFYEKALKVKEIC 60
Query: 140 KDR-ALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
K+ ALF+I +R+DIA AV A GV L +P AR +KD L+G + +
Sbjct: 61 KNYGALFIINDRLDIAQAVGADGVHLGQSDMPIEKAREILKDKF-------LIGATARNV 113
Query: 199 DAAFNASSSEGADFL--VCCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVS 250
+ A A GAD++ FG K + + + +VKIP+F + + +VS
Sbjct: 114 EEAKRAELL-GADYIGSGAIFGTNTKDNAKKLEIGELKKIVASVKIPVFAIGGININNVS 172
Query: 251 KFLKSGASG 259
G G
Sbjct: 173 SLKNIGLQG 181
>gi|55378843|ref|YP_136693.1| thiamine-phosphate pyrophosphorylase [Haloarcula marismortui ATCC
43049]
gi|68053061|sp|Q5V0G6.1|THIE_HALMA RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|55231568|gb|AAV46987.1| thiamine-phosphate pyrophosphorylase [Haloarcula marismortui ATCC
43049]
Length = 211
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG +++ EA+ VG+V L + + YE L+ + ++ + F++ +R+D+A
Sbjct: 16 AGRTTDEIVAEAIESGVGVVQLREKNRTARERYELGQKLRELTREADVTFVVNDRIDLAQ 75
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
A++A GV L D LP VAR+ + D ++GR+V T++ A A+++ GAD+L
Sbjct: 76 AIDADGVHLGDDDLPVSVARDILGDD-------AVIGRSVSTVEDAREAATA-GADYLGV 127
Query: 214 VCCFGEGQKADV 225
F G K D+
Sbjct: 128 GAVFATGSKDDI 139
>gi|329903036|ref|ZP_08273348.1| hypothetical protein IMCC9480_973 [Oxalobacteraceae bacterium
IMCC9480]
gi|327548514|gb|EGF33180.1| hypothetical protein IMCC9480_973 [Oxalobacteraceae bacterium
IMCC9480]
Length = 645
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+L++ ++I+DTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 195 IVNFPHPLLQQGLVIIDTPGLNAI-GTEPELTLNLIPNAHAVLFILAADTGVTKSDITIW 253
Query: 485 RYTQQWKKKVVFVLNKSDLY----QNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
R + VLNK D ++A E+E+ I+ + +LL ++ I+PVSA+
Sbjct: 254 RDHIGAGAGRMVVLNKIDSMWDELRSADEVEQQINQQVSSAAQLLGLQENQIFPVSAQKG 313
Query: 541 LEAKLS 546
L K++
Sbjct: 314 LVGKIN 319
>gi|419552573|ref|ZP_14090876.1| putative ATP/GTP binding protein [Campylobacter coli 2692]
gi|419553969|ref|ZP_14092122.1| putative ATP/GTP binding protein [Campylobacter coli 2698]
gi|419612157|ref|ZP_14146039.1| putative ATP/GTP binding protein [Campylobacter coli H9]
gi|380531218|gb|EIA56250.1| putative ATP/GTP binding protein [Campylobacter coli 2692]
gi|380533611|gb|EIA58533.1| putative ATP/GTP binding protein [Campylobacter coli 2698]
gi|380591033|gb|EIB12031.1| putative ATP/GTP binding protein [Campylobacter coli H9]
Length = 610
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+EE+S +D I I+G+++SGKS+++N +L K L GVVP T + TFLR+S
Sbjct: 51 LEELSFSLDKNINI------AIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYS 104
Query: 408 D--------------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
D LA QR + P P+LK++ +VDTPG N
Sbjct: 105 DEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|394990492|ref|ZP_10383324.1| hypothetical protein SCD_02919 [Sulfuricella denitrificans skB26]
gi|393790757|dbj|GAB72963.1| hypothetical protein SCD_02919 [Sulfuricella denitrificans skB26]
Length = 654
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 14/139 (10%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C RH I P P+LK+ ++I+DTPG N I + LT +P A VLF+++AD
Sbjct: 192 CWRHA----IINFPHPLLKQGLVILDTPGLNAI-GTEPELTLNLLPNAHAVLFILAADTG 246
Query: 476 LTESEVVFLR----YTQQWKKKVVFVLNKSDLYQNAFELEEAI--SFVKENTM--KLLNI 527
+T+S++ R Q +K + VLNK D + + EAI K+ T LL I
Sbjct: 247 VTKSDIEVWRNHIGNQQGHQKGRLVVLNKIDGLWDELKTTEAIESELDKQVTTSASLLGI 306
Query: 528 ENVTIYPVSARSTLEAKLS 546
+ ++PVSA+ L AK++
Sbjct: 307 KPDYVFPVSAQKGLLAKIN 325
>gi|383459446|ref|YP_005373435.1| hypothetical protein COCOR_07484 [Corallococcus coralloides DSM
2259]
gi|380731565|gb|AFE07567.1| hypothetical protein COCOR_07484 [Corallococcus coralloides DSM
2259]
Length = 569
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQR 416
+++ D P ++ +VG +GKS+++NAL G+ ++GV PT+ T A++E R
Sbjct: 43 MARKDAPLVVALVGATGAGKSTLLNALSGQNLSREGVDRPTSTVSTLFAPEGTATDELAR 102
Query: 417 CERHPDGQYICYLPSP--ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
+ + Y P P + + +DTP N + + + + +AD+ L V+
Sbjct: 103 T----GARVVRYTPGPQGLWSGQVFIDTPDLNSVATAHRDVARAALDKADVALVVMHRGS 158
Query: 475 PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAI-SFVKENTMKL--LNIENVT 531
++V FL + ++ +VF+LN +D + + E +A+ S V+ + L E+V
Sbjct: 159 VAEATQVEFLAEFAR-RRALVFILNFAD--ELSAESRDALKSQVRRVATQHYGLAAEDVP 215
Query: 532 IYPVSARST 540
++ +SAR+
Sbjct: 216 VFAISARAA 224
>gi|354582727|ref|ZP_09001628.1| Dynamin family protein [Paenibacillus lactis 154]
gi|353199019|gb|EHB64485.1| Dynamin family protein [Paenibacillus lactis 154]
Length = 1217
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 392 DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQ 450
+G + TT + + ++E++ C DG + Y P+ ++ +I+VDTPG + +
Sbjct: 745 EGRLGTTELVQLPEYRGYVADERKSC--FVDGIDL-YYSCPLTEQGIILVDTPGADSLHA 801
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQ 505
R +T ++ AD +++V + ++++ FL + K K+ F++N +DL Q
Sbjct: 802 RHTGVTFSYIKNADAIVYVTYYNHAFSKADRQFLSQLGRVKDSFALDKMFFIVNAADLAQ 861
Query: 506 NAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAV 551
+ EL E I V+ N + + + +YPVS++S L KL + +
Sbjct: 862 SEEELGEVIKHVRSN-LTANGVGSPHLYPVSSQSALTGKLQDDAGI 906
>gi|73540053|ref|YP_294573.1| hypothetical protein Reut_A0347 [Ralstonia eutropha JMP134]
gi|72117466|gb|AAZ59729.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
Length = 651
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 198 VINFPHPLLRQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 256
Query: 485 R--YTQQWKKKVVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R ++ + VLNK D L+ ++ E+ + IS +T ++L IE +YPVSA+
Sbjct: 257 RGHVGAGHRRGCLAVLNKIDGLWDPLKSQAEIAKEISGQITSTAQVLGIEQGRVYPVSAQ 316
Query: 539 STLEAKLS 546
L AK++
Sbjct: 317 KGLVAKVT 324
>gi|113475339|ref|YP_721400.1| dynamin [Trichodesmium erythraeum IMS101]
gi|110166387|gb|ABG50927.1| Dynamin [Trichodesmium erythraeum IMS101]
Length = 686
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 55/222 (24%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC------- 417
L+V+ GE+ GKSS+INALL + D + P +I S +A E+++
Sbjct: 50 LLVVVCGEFKEGKSSLINALL--KEANDDLFPVDADIATGIVSTIAYGEREQITVILGKP 107
Query: 418 --------ERHPDGQY----------------ICYLPSPILKE-MIIVDTPGTNVILQRQ 452
+R G Y + P+ LK+ +++VDTPG + +
Sbjct: 108 GKEKKEKIQRQEIGNYANEKFNKGNKRQARMLVIESPNQKLKDGLVLVDTPGVGGLNTQH 167
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLRY----TQQWKKKVVFVLNKSDL---YQ 505
+T F+P AD +LFV PL+E E+ FL++ V+FV+ K D YQ
Sbjct: 168 TGITYSFIPEADAILFVSDVKNPLSEDELKFLKFIVDRCPNVISNVIFVVTKIDSKADYQ 227
Query: 506 NAFELEEAISFVKENTMKLLNI-----ENVTIYPVSARSTLE 542
+ V N KL + + I PVS+ + L+
Sbjct: 228 ---------TIVANNREKLAQVLQRPGNEIPIVPVSSHNYLD 260
>gi|113866407|ref|YP_724896.1| GTPase [Ralstonia eutropha H16]
gi|113525183|emb|CAJ91528.1| Predicted GTPase [Ralstonia eutropha H16]
Length = 650
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 198 VINFPHPLLRQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 256
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R ++ + VLNK D + E+ + I+ T ++L IE +YPVSA+
Sbjct: 257 RSHVGAGHRRGCLAVLNKIDGLWDPLREPGEIAQEIARQVSTTAQVLGIEQSRVYPVSAQ 316
Query: 539 STLEAKLS 546
L AK++
Sbjct: 317 KGLVAKVT 324
>gi|254425321|ref|ZP_05039039.1| GTPase, putative [Synechococcus sp. PCC 7335]
gi|196192810|gb|EDX87774.1| GTPase, putative [Synechococcus sp. PCC 7335]
Length = 484
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 35/200 (17%)
Query: 325 QLIETERSVLLEAIDV--------------IKKASPLMEEVSLLIDAVSQIDEPFLLVIV 370
QL+E R+ L +AID + + + + + L ++++D L V V
Sbjct: 11 QLVEQARTSLRQAIDRYIPQLKMTQLSEQELTRQAAVKSGIDRLSALMNKLDSSLLRVAV 70
Query: 371 -GEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
G + GKS+VINALLG+ L+ +GV + ++ + Q R P
Sbjct: 71 FGLVSRGKSAVINALLGENILETGPLNGVTQWPRSVYWVPTDSRSHFGQSDFGRQP---- 126
Query: 426 ICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
LK + ++DTPG + I Q + ++ +E +ADL+LFV+S D +T++E + L
Sbjct: 127 --------LK-LELIDTPGLDEIEGQSRSKMAQEVAQQADLILFVVSGD--ITQTEYLAL 175
Query: 485 RYTQQWKKKVVFVLNKSDLY 504
+ +K ++ V NK DLY
Sbjct: 176 QELYATRKPLLLVFNKVDLY 195
>gi|86605426|ref|YP_474189.1| GTP-binding domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86553968|gb|ABC98926.1| GTP-binding protein domain [Synechococcus sp. JA-3-3Ab]
Length = 404
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 26/170 (15%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
F + + G N GKS+V+NAL G+ L+ G + N +T + P Q
Sbjct: 47 FSIAVFGLVNRGKSAVLNALTGEARLEVGPL---NGVT----------------QQP--Q 85
Query: 425 YICYLPSP-ILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ + P P I ++ +DTPG N I + +++L E ADL+LFVI+AD LT+ E
Sbjct: 86 SLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAWEVARAADLILFVIAAD--LTQLEYQ 143
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTI 532
L + K ++ VLNK DLY A EL+ + + + +L E +T+
Sbjct: 144 ALLELRTLHKPILLVLNKCDLYSEA-ELQAIRAQISRHLGWVLPQEILTV 192
>gi|407861160|gb|EKG07623.1| hypothetical protein TCSYLVIO_001245 [Trypanosoma cruzi]
Length = 611
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 42/219 (19%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ----------Q 415
+++++G +++GKS++IN LLG+ + GV PT + T ++ D SEE Q
Sbjct: 143 MVMLLGNHSAGKSTIINYLLGRAVQRTGVAPTDDGFTIIQRGDRDSEEDGPTSLSDPRYQ 202
Query: 416 RCERHPDGQYICY--------LP--SPILKEMIIVDTPGT---------NVILQRQQR-- 454
+ G + + LP S + ++IVDTPG L+ Q R
Sbjct: 203 LQDLQKFGMHFVHRFKVKTRQLPPSSNVPYGLMIVDTPGMIDTPVHVKDRTSLEGQLRGY 262
Query: 455 ----LTEEFVPRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQNAF 508
T F R D++L V P T E V + ++ K + V+NK D++ A
Sbjct: 263 DFLAATRWFASRCDVILLVFDPANPGTTGETLDVLTKSLAGFEHKFLLVMNKVDMFDKAT 322
Query: 509 ELEEAISFVKENTMKLLNIENV-----TIYPVSARSTLE 542
+ + + N K++ ++++ T PV +T E
Sbjct: 323 DFGRSYGALCWNLSKVIEMKDIPRIYTTFIPVKTAATEE 361
>gi|333977962|ref|YP_004515907.1| HSR1-like GTP-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821443|gb|AEG14106.1| GTP-binding protein HSR1-related protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 752
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 351 VSLLIDAVSQIDEPFLL-------VIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF 403
+ LL+D + ++ E +LL IVG YN+GKS++INALL + V+P T
Sbjct: 1 MPLLLDRIHELREKYLLQRPGPSLAIVGAYNTGKSTLINALLQEEISPVDVLPATPCPIL 60
Query: 404 LRFSDL----------ASEEQQRCERHPDGQYI------CYLPSPILKEMIIVDTPGTNV 447
+ ++ S+ +QR + I LP+P LK+ ++DTPG +
Sbjct: 61 FSYGEIFSIHADSRLKPSQSRQRLVSLLRQKNIRVSRVEITLPNPWLKKCSLIDTPGLDA 120
Query: 448 ILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
Q Q L E+ VP AD +L++ R L E + FL
Sbjct: 121 ANQNQ--LLEKIVPAADFILYLFH-QRGLDEQDRYFL 154
>gi|17231876|ref|NP_488424.1| hypothetical protein all4384 [Nostoc sp. PCC 7120]
gi|17133520|dbj|BAB76083.1| all4384 [Nostoc sp. PCC 7120]
Length = 491
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 302 DTSNSFFGKERVAGFVKFEDREKQL-IETERSVLLEAIDVI----KKASPLMEEVSLLID 356
DTS+ + +E + FED + +L + +S L +D I ++ + L E++ L
Sbjct: 19 DTSSLNWEEELDSAIFSFEDIQAELNYKQAQSALRNLVDNIDLSSQEKAGLESEIADLET 78
Query: 357 AVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLAS 411
+ ++D + + G GKSS++NAL+G+ + GV + + R S+ A
Sbjct: 79 MLGKLDSMVVQIAAFGMVGRGKSSLLNALVGESVFETGPLHGVTRAAQRVNW-RISEEAI 137
Query: 412 EEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVI 470
E +R R LPS ++ ++DTPG + I + + L E+ +ADL+LFVI
Sbjct: 138 GETERALR-------VTLPSVGRSQVELIDTPGLDEIDGETRTALAEQIAKQADLILFVI 190
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
S D E E L ++ K ++ V NK D Y A
Sbjct: 191 SGDMTKIEHEA--LSQLREAGKPIILVFNKVDQYPEA 225
>gi|340753568|ref|ZP_08690345.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 2_1_31]
gi|340566852|gb|EEO38179.2| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 2_1_31]
Length = 206
Score = 60.5 bits (145), Expect = 4e-06, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 105 IDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR-ALFLIAERVDIAAAVNASGVL 163
I+EA+ V IV L S K YE A +K + ++ ALF+I +R+DIA AV A GV
Sbjct: 26 IEEAIKGGVKIVQLREKNISTKDFYEKALKVKEICENYGALFIINDRLDIAQAVGADGVH 85
Query: 164 LSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--VCCFGEGQ 221
L +P AR +KD L+G + ++ A A GAD++ FG
Sbjct: 86 LGQSDMPIEKAREILKDKF-------LIGATARNIEEAKRAELL-GADYIGSGAIFGTNT 137
Query: 222 KADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASG 259
K + + + T+VKIP+F + + +VS G G
Sbjct: 138 KDNAKKLEMEELKKIVTSVKIPVFAIGGINIDNVSSLKNIGLQG 181
>gi|402547365|ref|ZP_10844235.1| dynamin family protein [Campylobacter sp. FOBRC14]
gi|401016444|gb|EJP75210.1| dynamin family protein [Campylobacter sp. FOBRC14]
Length = 707
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 165/377 (43%), Gaps = 89/377 (23%)
Query: 357 AVSQIDE-PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-------- 407
A +I+E F +V+ G N+GKS+++NALL + L VP T ++ L+F+
Sbjct: 163 ARQKIEELKFNIVVTGVVNAGKSTLLNALLNAKILGTSNVPETINLSILKFASEPYAKVN 222
Query: 408 ------------DLASE-----------EQQRCERHPDGQYI---------CYLPSPILK 435
D++SE + + + Y +LK
Sbjct: 223 FWSKSELKELGIDISSEPTGLAGSSIVIQTNELKNYTSAGSAHAKLVKSVELYENLELLK 282
Query: 436 EMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-- 492
+ I I+DTPG + + ++RL +F+ DL++ +++ + T+ +V F+ +
Sbjct: 283 DNIRIIDTPGIDDAVFLRERLVSDFMSECDLMVHLMNVSQSATQKDVEFIEQSVHGSHIV 342
Query: 493 KVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIEN----VTIYPVSARSTLEAKLSVS 548
K+V VL DL N EL E S+ K+ + N EN V + +SA++ L+
Sbjct: 343 KLVVVLTHVDLLSND-ELNEVTSYTKKRMNERFNSENSDLEVKFFAISAKNYLD------ 395
Query: 549 SAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLS 608
GK +S + ++ ++ LY G++S E+ RL LE + L
Sbjct: 396 ---GKPNSGI------------EEFKEYLYETFFGANS---EKSRLSLEA---YKKELNG 434
Query: 609 SCETLVMKDCQD----AKQDLTLANEMIDSL--KEYVMKMESESIS------WRRKTLSL 656
CE L+ + Q + +L+L NE L +E +K E E++S R +S
Sbjct: 435 VCEELLAQTTQSILNLSGSNLSL-NEKFSELNEQEAALKSEFEALSQVAQEQLNRLDVSG 493
Query: 657 IDSTKSRVVKLIESTLQ 673
+++ S +K++ +LQ
Sbjct: 494 LEANFSTGLKMLAQSLQ 510
>gi|334137895|ref|ZP_08511321.1| dynamin family [Paenibacillus sp. HGF7]
gi|333604736|gb|EGL16124.1| dynamin family [Paenibacillus sp. HGF7]
Length = 1259
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS--------EEQ 414
E +L G +++GKS++IN L G R L +PT+ I + + + EE+
Sbjct: 45 EKTVLAFCGHFSAGKSTLINTLCGHRLLPSSPIPTSANIVSIESGEEGAEVVQRSEGEEE 104
Query: 415 QRCERHPDGQYICY-------------LPSPILKE-MIIVDTPGTNVILQRQQRLTEEFV 460
R R P + Y P P L E +++DTPG + TE +
Sbjct: 105 ARIRRIPLSELDAYCVNGTDIEEVRISYPLPFLGEHAVLLDTPGIDSTDGAHHMATESAL 164
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
AD V +V+ + +E + F + ++ K + ++N+ D ++ EE +SF
Sbjct: 165 HLADAVFYVMDYNHVQSEVNLAFTKQMKERGKPLYLIVNQIDKHR-----EEELSFDTYK 219
Query: 521 TMKLLNIENVTIYP 534
L + IYP
Sbjct: 220 ESALEAFRSWGIYP 233
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKEMII-VDTPGTNVILQRQQRLTEEFVPRA 463
F+ +EE + C +YI + +P+ ++ I+ VDTPG + I R + +++ A
Sbjct: 797 FAGYVAEESKSCFV----EYIELHYSTPLTEQGIVFVDTPGADSINARHTGVAFDYIKNA 852
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D +LFV + ++++ FL + K K+ F++N +DL + EL+ + ++
Sbjct: 853 DAILFVTYYNHAFSQADREFLLQLGRVKDSFELDKMFFLVNAADLAASEEELQGVVRHIE 912
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLS 546
N ++ I + IYPVS+ E KLS
Sbjct: 913 TNLLQ-HGIRHPRIYPVSSHLAAEGKLS 939
>gi|154150476|ref|YP_001404094.1| dynamin family protein [Methanoregula boonei 6A8]
gi|153999028|gb|ABS55451.1| Dynamin family protein [Methanoregula boonei 6A8]
Length = 679
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL----------RFSDLAS 411
D F + + G +SGKSS++NA++G L GV P T T + F+D +
Sbjct: 195 DRSFEIAVFGRVSSGKSSLLNAIIGTDVLPVGVTPVTAVPTRIIHGKDPSLTVSFADAPA 254
Query: 412 ---EEQQRCE-----------RHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTE 457
E +Q E +H + S + + + VDTPG + T
Sbjct: 255 RTFETRQLAEFATEQHNPNNIKHVTRVTVTIPVSRLFEGVSFVDTPGLGSLATGGAAETR 314
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
++PR DL + +I A LTE +V +R Q+ +L+K+DL + E+ + ++
Sbjct: 315 AYLPRCDLGVVLIDAGSTLTEEDVRTIRTLQEAAIPAHILLSKADLLDRP-DCEKTLGYI 373
Query: 518 KENTMKLLNIENVTIYPVS 536
+++ + ++ +YPVS
Sbjct: 374 RQHIASETGL-DLPVYPVS 391
>gi|379720964|ref|YP_005313095.1| hypothetical protein PM3016_3080 [Paenibacillus mucilaginosus 3016]
gi|378569636|gb|AFC29946.1| hypothetical protein PM3016_3080 [Paenibacillus mucilaginosus 3016]
Length = 1183
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 406 FSDLASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRAD 464
F A+EE + C + Y +P+ ++ +++VDTPG + I R + E++ AD
Sbjct: 725 FGAYAAEESRSCFVE---EIELYYNNPLTEQGVVLVDTPGADSINARHTGVAFEYIKNAD 781
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKE 519
+LFV + + ++ FL + K K+ F++N +DL + ELE +S V+
Sbjct: 782 AILFVTYYNHAFSHADREFLLQLGRVKDSFELDKMFFIVNAADLASSPEELEGVVSHVES 841
Query: 520 NTMKLLNIENVTIYPVSARSTLEAKLS 546
N ++ I + IYP+S+ L+ KL+
Sbjct: 842 NLLQ-HGIRHPRIYPLSSYYALQGKLA 867
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 90/240 (37%), Gaps = 59/240 (24%)
Query: 312 RVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEE-VSLLIDAVSQIDEP------ 364
R AG +D+E +L E+ + P M E V L+ V Q +
Sbjct: 5 RTAGETALKDKEAELGSVEKKGM--------AGDPAMREAVRTLLGKVEQAGDEENARKL 56
Query: 365 -----------FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL--------- 404
L G +++GKSS+IN L G + L +PT+ I +
Sbjct: 57 KQLLAKAESGRLYLAFCGHFSAGKSSLINRLCGHQLLPSSPIPTSANIVSIVSGEAGARV 116
Query: 405 ----------------RFSDLASEEQQRCERHPDGQY--ICYLPSPILKEMI-IVDTPGT 445
DLA + C D + I Y P P+L E ++DTPG
Sbjct: 117 IYRELGEGGSPKVDRVALEDLA----EHCRNGTDIETVEIAY-PIPLLGEAAALLDTPGI 171
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ TE + AD+V +V+ + +E + F + +W K + ++N D ++
Sbjct: 172 DSTDDAHHLATESALHLADVVFYVMDYNHVQSEINLSFTKKMTEWGKPLYLIINMVDKHR 231
>gi|57168551|ref|ZP_00367684.1| probable ATP /GTP binding protein Cj0412 [Campylobacter coli
RM2228]
gi|57020056|gb|EAL56733.1| probable ATP /GTP binding protein Cj0412 [Campylobacter coli
RM2228]
Length = 570
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
+D+ + I+G+++SGKS+++N +L K L GVVP T + TFLR++D
Sbjct: 18 LDKNINIAIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYADEYFLRVEFQDGS 77
Query: 409 --------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR + P P+LK++ +VDTPG N
Sbjct: 78 DEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 123
>gi|395760754|ref|ZP_10441423.1| hypothetical protein JPAM2_03218 [Janthinobacterium lividum PAMC
25724]
Length = 633
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 18/137 (13%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A VLF+++AD +T S++
Sbjct: 192 IINFPHPLLKQGLVILDTPGLNAI-GTEPELTLNLIPNAHAVLFILAADTGVTRSDI--- 247
Query: 485 RYTQQWKKKV------VFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYP 534
+ W+ + + VLNK D + E+ +AI + + LL ++ ++P
Sbjct: 248 ---EVWRNHIGAGVGRLVVLNKIDSMWDELRGDAEVAQAIERQQASVAHLLTLDAGQVFP 304
Query: 535 VSARSTLEAKLSVSSAV 551
VSA+ L K++ +A+
Sbjct: 305 VSAQKALVGKINQDAAL 321
>gi|71650006|ref|XP_813710.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878620|gb|EAN91859.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 673
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 42/219 (19%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ----------Q 415
+++++G +++GKS++IN LLG+ + GV PT + T ++ D SEE Q
Sbjct: 205 MVMLLGNHSAGKSTIINYLLGRAVQRTGVAPTDDGFTIIQRGDRDSEEDGPTSLSDPRYQ 264
Query: 416 RCERHPDGQYICY--------LP--SPILKEMIIVDTPGT---------NVILQRQQR-- 454
+ G + + LP S + ++IVDTPG L+ Q R
Sbjct: 265 LQDLQKFGMHFVHRFKVKTRQLPPSSNVPYGLMIVDTPGMIDTPVHVKDRTSLEGQLRGY 324
Query: 455 ----LTEEFVPRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQNAF 508
T F R D++L V P T E V + ++ K + V+NK D++ A
Sbjct: 325 DFLAATRWFASRCDVILLVFDPANPGTTGETLDVLTKSLAGFEHKFLLVMNKVDMFDKAT 384
Query: 509 ELEEAISFVKENTMKLLNIENV-----TIYPVSARSTLE 542
+ + + N K++ ++++ T PV +T E
Sbjct: 385 DFGRSYGALCWNLSKVIEMKDIPRIYTTFIPVKTAATEE 423
>gi|339324548|ref|YP_004684241.1| GTPase [Cupriavidus necator N-1]
gi|338164705|gb|AEI75760.1| GTPase [Cupriavidus necator N-1]
Length = 650
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 198 VINFPHPLLRQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 256
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVSAR 538
R ++ + VLNK D + E+ + I+ T ++L IE +YPVSA+
Sbjct: 257 RSHVGAGHRRGCLAVLNKIDGLWDPLREPGEIAQEIARQVSTTGQVLGIEQSRVYPVSAQ 316
Query: 539 STLEAKLS 546
L AK++
Sbjct: 317 KGLVAKVT 324
>gi|357634361|ref|ZP_09132239.1| Dynamin family protein [Desulfovibrio sp. FW1012B]
gi|357582915|gb|EHJ48248.1| Dynamin family protein [Desulfovibrio sp. FW1012B]
Length = 486
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLLID---AVSQIDEPFLLVIVGEYNSGKSSV 380
K+ ++ E +L++A+ KK + + LL +SQI L+ I+G +++GKS+
Sbjct: 14 KEHLQLENPLLVDAVGSFKKLDTVCRGLGLLASDQSTISQIAWWPLISILGPFSAGKSTF 73
Query: 381 INALLGKRYLKDG--------------------VVPTTNEITFLRFSDL-ASEEQQRCER 419
IN LG + G V+P T LRF SEE ++ E
Sbjct: 74 INYYLGTPVQQTGSHAVDDKFTVICYNAAGESRVLPGTALNADLRFPFYKMSEELEKVEP 133
Query: 420 HPDGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQ--RLTEEFVPRADLVLFVISA 472
G+ Y+ PS L+ +I++D+PG + QR R+T + +DLVL + A
Sbjct: 134 GEGGRIDSYIRLKTSPSDKLRGLILIDSPGFDADAQRTSTLRITNHIMDLSDLVLVLFDA 193
Query: 473 DRPL------TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
RP T + +V ++ K +++LN+ D+ EE +
Sbjct: 194 RRPEPGAMRDTLTHLVAATINRRDSNKFIYILNQMDIAAREDNPEEVVG 242
>gi|74316400|ref|YP_314140.1| hypothetical protein Tbd_0382 [Thiobacillus denitrificans ATCC
25259]
gi|74055895|gb|AAZ96335.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 652
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+LK+ ++I+DTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 197 LINFPHPLLKQGLVILDTPGLNAI-GTEPELTLNMLPAAHAVLFLLAADTGVTKSDIAIW 255
Query: 485 R----YTQQWKKKVVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
R + + VLNK D L+ + A E++ ++ T LL++ +YPVS
Sbjct: 256 REHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATTAALLDVAPGQVYPVS 315
Query: 537 ARSTLEAKLSVSSAV 551
A+ L AK+ A+
Sbjct: 316 AQKALVAKVRSDDAL 330
>gi|333896836|ref|YP_004470710.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112101|gb|AEF17038.1| Thiamine-phosphate pyrophosphorylase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 209
Score = 60.1 bits (144), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVV-KDRALFLIAERVDIAA 155
AG D D ++E++ V ++ L + S + YE A LK + K F+I +R+DIA
Sbjct: 19 AGRDFYDAVEESLQNGVTMLQLREKDISSREFYEIAKRLKDIAGKYNVPFIINDRIDIAL 78
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
+V+A GV L + LP +AR M D+ ++G + +D A A +GAD++
Sbjct: 79 SVDADGVHLGQEDLPCSIARKIMSDN-------KIIGISAGCVDEAVEA-ERDGADYIGA 130
Query: 214 VCCFGEGQKADVIE-------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLE 265
F G K D+ E + VKIP+ + + +++G G + E
Sbjct: 131 GAVFYTGTKKDIGEAIGLLDLKKIKEAVKIPVVAIGGIKYSNALDVMRTGVDGISVVSE 189
>gi|219883113|ref|YP_002478275.1| hypothetical protein Cyan7425_5314 [Cyanothece sp. PCC 7425]
gi|219867238|gb|ACL47576.1| hypothetical protein Cyan7425_5314 [Cyanothece sp. PCC 7425]
Length = 952
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 51/220 (23%)
Query: 336 EAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV 395
+A+D++K+A+ L E + F L+++GE+ GKS+++NA+LG + L +
Sbjct: 297 DAVDLLKRATDLHEGI-------------FNLIVIGEFKHGKSTLLNAMLGGKILPANTL 343
Query: 396 PTTNEIT---------------------------FLRFSDLASEEQQRCE------RHPD 422
PTT IT F + L+S +Q+ E R +
Sbjct: 344 PTTAIITMLVRGETDKVEIFEAEPKQSKIISIDEFRKSYSLSSSDQETIEQRGFIDRFEN 403
Query: 423 GQYI-CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
+Y P+ + ++D+PG L R R+ F ++ LF+++A +PL E+E
Sbjct: 404 IEYAKIECKHPLCSGGVRLIDSPGLAEQLSR-TRIATNFFKQSQAALFILNACQPLGENE 462
Query: 481 VVFLR--YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
F+ + + V FV+N+ D + E+EE ++ +
Sbjct: 463 RDFIETYFKPGFVDHVFFVVNRMDAIDDEDEVEEVKNYFR 502
>gi|254426080|ref|ZP_05039797.1| GTPase, putative [Synechococcus sp. PCC 7335]
gi|196188503|gb|EDX83468.1| GTPase, putative [Synechococcus sp. PCC 7335]
Length = 522
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 39/159 (24%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L++ ++ EP + IVG+ +GKS+++NALLG+ + G V T I +L++
Sbjct: 34 LLNCQQRLSEPMRVAIVGKIKAGKSTMLNALLGEEIVATGTVEATFNINWLKYGPHHTLK 93
Query: 408 ----DLASEEQ---------QRCERHPDG----QYI-CYLPSPILKEMIIVDTPGTNVIL 449
+ SE++ QR + H D +YI + P+PILK ++DTPG +
Sbjct: 94 VHYKNGKSEDKSFEDLQTLTQRADEHQDYLLSIKYIEVFYPNPILKTFHLIDTPGLDSFY 153
Query: 450 QRQQRLTEEFV---------------PRADLVLFVISAD 473
+ + T +F+ +AD VL++ S +
Sbjct: 154 KDDSQNTRDFLNLRGQELTALTQAEADKADAVLYLFSHN 192
>gi|419600008|ref|ZP_14134783.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23344]
gi|380583608|gb|EIB05135.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23344]
Length = 610
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+EE+S +D I I+G+++SGKS+++N +L K L GVVP T + TFLR++
Sbjct: 51 LEELSFSLDKNINI------AIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYA 104
Query: 408 D--------------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
D LA QR + P P+LK++ +VDTPG N
Sbjct: 105 DEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|428778144|ref|YP_007169931.1| small GTP-binding protein [Halothece sp. PCC 7418]
gi|428692423|gb|AFZ45717.1| small GTP-binding protein [Halothece sp. PCC 7418]
Length = 455
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 25/158 (15%)
Query: 349 EEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
E++ + A ++DE + + G + GKS+VINAL+GK+ + G V
Sbjct: 47 EDLQSIKAAYDKLDETIIRIATFGLVSRGKSAVINALVGKKVMTTGPV------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLV 466
R P Q I + PS ++ ++DTPG + V + + ++ + +ADL+
Sbjct: 95 -------HGVTRWP--QTIRWTPSSGKVQIELIDTPGLDEVEGEERAQMAQTIAQQADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
LFV++ D +T +E L +Q KK ++ V NK DLY
Sbjct: 146 LFVVAGD--ITRTEYQALCELRQAKKPILLVFNKVDLY 181
>gi|305432968|ref|ZP_07402126.1| GTP-binding protein [Campylobacter coli JV20]
gi|419537943|ref|ZP_14077306.1| putative ATP/GTP binding protein [Campylobacter coli 90-3]
gi|419539808|ref|ZP_14079055.1| putative ATP/GTP binding protein [Campylobacter coli Z163]
gi|419542062|ref|ZP_14081195.1| putative ATP/GTP binding protein [Campylobacter coli 2548]
gi|419543712|ref|ZP_14082689.1| putative ATP/GTP binding protein [Campylobacter coli 2553]
gi|419546147|ref|ZP_14084909.1| putative ATP/GTP binding protein [Campylobacter coli 2680]
gi|419550425|ref|ZP_14088930.1| putative ATP/GTP binding protein [Campylobacter coli 2688]
gi|419555844|ref|ZP_14093849.1| putative ATP/GTP binding protein [Campylobacter coli 84-2]
gi|419557582|ref|ZP_14095487.1| putative ATP/GTP binding protein [Campylobacter coli 80352]
gi|419560062|ref|ZP_14097713.1| putative ATP/GTP binding protein [Campylobacter coli 86119]
gi|419562516|ref|ZP_14100023.1| putative ATP/GTP binding protein [Campylobacter coli 1091]
gi|419564526|ref|ZP_14101904.1| putative ATP/GTP binding protein [Campylobacter coli 1098]
gi|419565693|ref|ZP_14102965.1| putative ATP/GTP binding protein [Campylobacter coli 1148]
gi|419567819|ref|ZP_14104972.1| putative ATP/GTP binding protein [Campylobacter coli 1417]
gi|419569644|ref|ZP_14106702.1| putative ATP/GTP binding protein [Campylobacter coli 7--1]
gi|419571405|ref|ZP_14108359.1| putative ATP/GTP binding protein [Campylobacter coli 132-6]
gi|419573850|ref|ZP_14110636.1| putative ATP/GTP binding protein [Campylobacter coli 1891]
gi|419577522|ref|ZP_14114075.1| putative ATP/GTP binding protein [Campylobacter coli 59-2]
gi|419579027|ref|ZP_14115447.1| putative ATP/GTP binding protein [Campylobacter coli 1948]
gi|419581163|ref|ZP_14117472.1| putative ATP/GTP binding protein [Campylobacter coli 1957]
gi|419582919|ref|ZP_14119111.1| putative ATP/GTP binding protein [Campylobacter coli 1961]
gi|419584698|ref|ZP_14120763.1| putative ATP/GTP binding protein [Campylobacter coli 202/04]
gi|419586887|ref|ZP_14122843.1| putative ATP/GTP binding protein [Campylobacter coli 67-8]
gi|419592499|ref|ZP_14127747.1| putative ATP/GTP binding protein [Campylobacter coli LMG 9854]
gi|419594458|ref|ZP_14129586.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23336]
gi|419602932|ref|ZP_14137499.1| putative ATP/GTP binding protein [Campylobacter coli 151-9]
gi|419604075|ref|ZP_14138549.1| putative ATP/GTP binding protein [Campylobacter coli LMG 9853]
gi|419606878|ref|ZP_14141232.1| putative ATP/GTP binding protein [Campylobacter coli LMG 9860]
gi|419607924|ref|ZP_14142126.1| putative ATP/GTP binding protein [Campylobacter coli H6]
gi|419613885|ref|ZP_14147679.1| putative ATP/GTP binding protein [Campylobacter coli H56]
gi|419616889|ref|ZP_14150524.1| putative ATP/GTP binding protein [Campylobacter coli Z156]
gi|304444122|gb|EFM36777.1| GTP-binding protein [Campylobacter coli JV20]
gi|380518826|gb|EIA44917.1| putative ATP/GTP binding protein [Campylobacter coli Z163]
gi|380519118|gb|EIA45203.1| putative ATP/GTP binding protein [Campylobacter coli 90-3]
gi|380523089|gb|EIA48749.1| putative ATP/GTP binding protein [Campylobacter coli 2680]
gi|380524055|gb|EIA49683.1| putative ATP/GTP binding protein [Campylobacter coli 2548]
gi|380526296|gb|EIA51763.1| putative ATP/GTP binding protein [Campylobacter coli 2553]
gi|380530587|gb|EIA55654.1| putative ATP/GTP binding protein [Campylobacter coli 2688]
gi|380535557|gb|EIA60257.1| putative ATP/GTP binding protein [Campylobacter coli 84-2]
gi|380537743|gb|EIA62285.1| putative ATP/GTP binding protein [Campylobacter coli 86119]
gi|380540695|gb|EIA64992.1| putative ATP/GTP binding protein [Campylobacter coli 1091]
gi|380541662|gb|EIA65916.1| putative ATP/GTP binding protein [Campylobacter coli 80352]
gi|380542115|gb|EIA66357.1| putative ATP/GTP binding protein [Campylobacter coli 1098]
gi|380547299|gb|EIA71222.1| putative ATP/GTP binding protein [Campylobacter coli 1417]
gi|380548613|gb|EIA72513.1| putative ATP/GTP binding protein [Campylobacter coli 1148]
gi|380548894|gb|EIA72783.1| putative ATP/GTP binding protein [Campylobacter coli 7--1]
gi|380550631|gb|EIA74273.1| putative ATP/GTP binding protein [Campylobacter coli 1891]
gi|380553763|gb|EIA77265.1| putative ATP/GTP binding protein [Campylobacter coli 132-6]
gi|380557230|gb|EIA80449.1| putative ATP/GTP binding protein [Campylobacter coli 59-2]
gi|380558140|gb|EIA81326.1| putative ATP/GTP binding protein [Campylobacter coli 1948]
gi|380559894|gb|EIA83022.1| putative ATP/GTP binding protein [Campylobacter coli 1957]
gi|380563302|gb|EIA86140.1| putative ATP/GTP binding protein [Campylobacter coli 202/04]
gi|380564324|gb|EIA87134.1| putative ATP/GTP binding protein [Campylobacter coli 1961]
gi|380565655|gb|EIA88376.1| putative ATP/GTP binding protein [Campylobacter coli 67-8]
gi|380572206|gb|EIA94540.1| putative ATP/GTP binding protein [Campylobacter coli LMG 9854]
gi|380576058|gb|EIA98119.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23336]
gi|380580089|gb|EIB01858.1| putative ATP/GTP binding protein [Campylobacter coli 151-9]
gi|380580726|gb|EIB02463.1| putative ATP/GTP binding protein [Campylobacter coli LMG 9853]
gi|380586220|gb|EIB07526.1| putative ATP/GTP binding protein [Campylobacter coli H6]
gi|380586548|gb|EIB07842.1| putative ATP/GTP binding protein [Campylobacter coli LMG 9860]
gi|380593778|gb|EIB14598.1| putative ATP/GTP binding protein [Campylobacter coli H56]
gi|380594803|gb|EIB15579.1| putative ATP/GTP binding protein [Campylobacter coli Z156]
Length = 610
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
+D+ + I+G+++SGKS+++N +L K L GVVP T + TFLR++D
Sbjct: 58 LDKNINIAIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYADEYFLRVEFQDGS 117
Query: 409 --------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR + P P+LK++ +VDTPG N
Sbjct: 118 DEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|419548090|ref|ZP_14086723.1| putative ATP/GTP binding protein [Campylobacter coli 2685]
gi|419596437|ref|ZP_14131442.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23341]
gi|419598254|ref|ZP_14133139.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23342]
gi|380527946|gb|EIA53286.1| putative ATP/GTP binding protein [Campylobacter coli 2685]
gi|380576483|gb|EIA98539.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23341]
gi|380577459|gb|EIA99472.1| putative ATP/GTP binding protein [Campylobacter coli LMG 23342]
Length = 610
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+EE+S +D I I+G+++SGKS+++N +L K L GVVP T + TFLR++
Sbjct: 51 LEELSFSLDKNINI------AIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYA 104
Query: 408 D--------------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
D LA QR + P P+LK++ +VDTPG N
Sbjct: 105 DEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|419536364|ref|ZP_14075846.1| putative ATP/GTP binding protein [Campylobacter coli 111-3]
gi|380518518|gb|EIA44613.1| putative ATP/GTP binding protein [Campylobacter coli 111-3]
Length = 610
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+EE+S +D I I+G+++SGKS+++N +L K L GVVP T + TFLR++
Sbjct: 51 LEELSFSLDKNINI------AIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYA 104
Query: 408 D--------------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
D LA QR + P P+LK++ +VDTPG N
Sbjct: 105 DEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|419575889|ref|ZP_14112564.1| putative ATP/GTP binding protein [Campylobacter coli 1909]
gi|380552585|gb|EIA76141.1| putative ATP/GTP binding protein [Campylobacter coli 1909]
Length = 610
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+EE+S +D I I+G+++SGKS+++N +L K L GVVP T + TFLR++
Sbjct: 51 LEELSFSLDKNINI------AIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYA 104
Query: 408 D--------------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
D LA QR + P P+LK++ +VDTPG N
Sbjct: 105 DEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|419590672|ref|ZP_14126036.1| putative ATP/GTP binding protein [Campylobacter coli 37/05]
gi|380570275|gb|EIA92703.1| putative ATP/GTP binding protein [Campylobacter coli 37/05]
Length = 610
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+EE+S +D I I+G+++SGKS+++N +L K L GVVP T + TFLR++
Sbjct: 51 LEELSFSLDKNINI------AIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYA 104
Query: 408 D--------------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
D LA QR + P P+LK++ +VDTPG N
Sbjct: 105 DEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|419588141|ref|ZP_14123967.1| putative ATP/GTP binding protein [Campylobacter coli 317/04]
gi|380570915|gb|EIA93329.1| putative ATP/GTP binding protein [Campylobacter coli 317/04]
Length = 610
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+EE+S +D I I+G+++SGKS+++N +L K L GVVP T + TFLR++
Sbjct: 51 LEELSFSLDKNINI------AIIGQFSSGKSTLLNLILKKECLPTGVVPVTFKPTFLRYA 104
Query: 408 D--------------------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
D LA QR + P P+LK++ +VDTPG N
Sbjct: 105 DEYFLRVEFQDGSDEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|377831276|ref|ZP_09814257.1| hypothetical protein LBLM1_05190 [Lactobacillus mucosae LM1]
gi|377554954|gb|EHT16652.1| hypothetical protein LBLM1_05190 [Lactobacillus mucosae LM1]
Length = 478
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 46/251 (18%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI---TFL 404
++++ LI + + +P +L IV ++GKS++IN+LL R +VP + E T +
Sbjct: 44 LKKLDKLIKTFTSLKQPEIL-IVAPMSAGKSTLINSLLASR-----IVPASQEACTSTIV 97
Query: 405 RFSDL-------ASEEQQRC---------------ERHPDGQYICYLPSPILKE--MIIV 440
R + A +E C E + LP P + + ++
Sbjct: 98 RLFNSQDKKDVEAFDEDNNCIASGSASIDELTTMNELSEAVRIDASLPIPFAGDAPVTVI 157
Query: 441 DTPGTNVILQR-QQRLTEEFVP--RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
DTPG N L + Q + EF+ +A+L LF+++ + T+SE L + + VVFV
Sbjct: 158 DTPGPNNALNKAHQNVLFEFLDHHQAELTLFIMNGTQLGTDSEKQLLDRIIETQPNVVFV 217
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLL----NIENVTIYPVSARSTLEAKLSVSSA--V 551
+NK D F E I+ V EN K L +I+N I+PVSA+ L+ ++ + + V
Sbjct: 218 INKMD----EFRTNEDITNVLENVRKYLENQFSIQNPRIFPVSAQFALDLQIHMKNQELV 273
Query: 552 GKDHSELSVND 562
+ EL+ +D
Sbjct: 274 MDEWGELTFSD 284
>gi|76802661|ref|YP_330756.1| thiamine-phosphate pyrophosphorylase [Natronomonas pharaonis DSM
2160]
gi|121708028|sp|Q3IP34.1|THIE_NATPD RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|76558526|emb|CAI50118.1| thiamine-phosphate synthase [Natronomonas pharaonis DSM 2160]
Length = 214
Score = 59.7 bits (143), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
AG ++++ A+ V IV L A+ + YE L+++ +D + L+ +R+D+AA
Sbjct: 17 AGRSTAEVVEAAIRGGVDIVQLRDKTATARERYEVGTELRTLTRDAGVPLVVNDRLDLAA 76
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
A++A GV L D LP VAR + +VGR+V T DAA A + GAD+L
Sbjct: 77 AIDADGVHLGDDDLPIEVAREQLGSD-------AIVGRSVSTPDAAREAEQA-GADYL 126
>gi|150018926|ref|YP_001311180.1| HSR1-like GTP-binding protein [Clostridium beijerinckii NCIMB 8052]
gi|149905391|gb|ABR36224.1| GTP-binding protein, HSR1-related [Clostridium beijerinckii NCIMB
8052]
Length = 601
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 24/152 (15%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ------ 414
I+ +V++GE +SGKS++IN++ ++ L + V PTT +T + D +SEE
Sbjct: 38 INPAHYIVMLGETSSGKSALINSIFQRKILVESVKPTTGIVTEV-IIDESSEETLFAINN 96
Query: 415 ------------QRCERHPDG-----QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTE 457
PDG +YI M I DTPG +++R + + +
Sbjct: 97 DLSIDVLDDDSFSNFTVKPDGNINRLRYIGPCKDSRYSGMRIFDTPGYGSLVERHEEVLK 156
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
F+P +D +++V+S + E + FL+Y +
Sbjct: 157 NFIPESDFIIYVVSYKTGVGEDDFQFLKYVSE 188
>gi|386390778|ref|ZP_10075559.1| dynamin family protein [Desulfovibrio sp. U5L]
gi|385731656|gb|EIG51854.1| dynamin family protein [Desulfovibrio sp. U5L]
Length = 486
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLL---IDAVSQIDEPFLLVIVGEYNSGKSSV 380
K+ ++ E +L++A+ KK + + LL +SQI L+ I+G +++GKS+
Sbjct: 14 KEHLQLENPLLVDAVGSFKKLDTVCRGLGLLGSDQSTISQIAWWPLISILGPFSAGKSTF 73
Query: 381 INALLGKRYLKDG--------------------VVPTTNEITFLRFSDL-ASEEQQRCER 419
IN LG + G V+P T LRF SEE ++ E
Sbjct: 74 INYYLGTPVQQTGSHAVDDKFTVICYNAAGESRVLPGTALNADLRFPFYKMSEELEKVEP 133
Query: 420 HPDGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQ--RLTEEFVPRADLVLFVISA 472
G+ Y+ PS L+ +I++D+PG + QR R+T + +DLVL + A
Sbjct: 134 GEGGRIDSYIRLKTSPSDKLRGLILIDSPGFDADAQRTSTLRITNHIMDLSDLVLVLFDA 193
Query: 473 DRPL------TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
RP T + +V ++ K +++LN+ D+ EE +
Sbjct: 194 RRPEPGAMRDTLTHLVAATINRRDSNKFIYILNQMDIAAREDNPEEVVG 242
>gi|23099155|ref|NP_692621.1| hypothetical protein OB1700 [Oceanobacillus iheyensis HTE831]
gi|22777383|dbj|BAC13656.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 1210
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 386 GKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE-RHPDGQYICYLPSPILKEMIIVDTPG 444
G + +KD + + IT FS +EE + C + D Y C + + + +VDTPG
Sbjct: 735 GYQQMKD-YLGSEKMITLQEFSSFVTEESKACFIKEMDLYYDCGITQ---QGITLVDTPG 790
Query: 445 TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLN 499
+ I R ++ E++ AD +L+V + L+ ++ FL + K K+ F++N
Sbjct: 791 ADSINARHTNVSFEYIKHADAILYVTYYNHALSRADKDFLMQLGRVKDVFELDKMFFIVN 850
Query: 500 KSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
SDL + EL ++V+E ++ L I + +YPVS++ +L+ K
Sbjct: 851 ASDLAVDQTELALVTNYVEEQLLQ-LGIRHPRLYPVSSKLSLKEK 894
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT-----------FLRFSDLA 410
++ ++ +VG +++GKSS+IN L+G L + +PT+ I + D
Sbjct: 42 NQELIIALVGHFSAGKSSMINHLMGSELLANSPIPTSANIVKITSGQGVANVYFHNGD-- 99
Query: 411 SEEQQRCERHP-----------DGQYICYL----PSPILKE-MIIVDTPGTNVILQRQQR 454
+R R P D Q I + + IL E I+DTPG + +
Sbjct: 100 ----KRVYREPYDLQEIKKYSTDKQQISRIDISTSTTILPEGTAILDTPGIDAADDADRM 155
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
LTE + AD +L++ + +E + FL+ + + V ++N+ D
Sbjct: 156 LTESALHLADYMLYITDYNHVQSEVNLQFLQTMEDKQLPYVVIVNQID 203
>gi|419610594|ref|ZP_14144655.1| putative ATP/GTP binding protein [Campylobacter coli H8]
gi|380589783|gb|EIB10824.1| putative ATP/GTP binding protein [Campylobacter coli H8]
Length = 610
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 20/106 (18%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
+D+ + I+G+++SGKS+++N +L K L GVVP T + TFLR++D
Sbjct: 58 LDKNINIAIIGQFSSGKSTLLNLILKKECLPAGVVPVTFKPTFLRYADEYFLRVEFQDGS 117
Query: 409 --------LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR + P P+LK++ +VDTPG N
Sbjct: 118 DEITHIEELAKYTDQRNNVKETKSLHIFAPIPLLKKITLVDTPGLN 163
>gi|448684725|ref|ZP_21692812.1| thiamine-phosphate pyrophosphorylase [Haloarcula japonica DSM 6131]
gi|445782656|gb|EMA33497.1| thiamine-phosphate pyrophosphorylase [Haloarcula japonica DSM 6131]
Length = 211
Score = 59.7 bits (143), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG +++ +A+ VG+V L + + + YE L+ ++ + F++ +R+D+A
Sbjct: 16 AGRTTDEIVADAIDGGVGVVQLREKDRTARERYELGLELRERTREAGVTFVVNDRIDLAQ 75
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
A++A GV L D LP VAR + D L+GR+V T++ A A+S+ GAD+L
Sbjct: 76 ALDADGVHLGDDDLPVPVARELLGDD-------ALIGRSVSTVEDAQEAASA-GADYLGV 127
Query: 214 VCCFGEGQKADV 225
F G K D+
Sbjct: 128 GAVFATGSKDDI 139
>gi|358635742|dbj|BAL23039.1| hypothetical protein AZKH_0699 [Azoarcus sp. KH32C]
Length = 662
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C RH + P P+L++ ++++DTPG N I + LT +P A VLFV++AD
Sbjct: 195 CWRHA----VIQFPHPLLEQGLVVLDTPGLNAI-GAEPELTLSLLPNAHAVLFVLAADTG 249
Query: 476 LTESEVVFLR-YTQ---QWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNI 527
+T+S++ R Y Q Q K + VLNK D + ++E I+ + L I
Sbjct: 250 VTQSDLTVWREYVQAGRQRKTGRLVVLNKIDGLWDGLRDDAQIEAEITRQIATVSETLEI 309
Query: 528 ENVTIYPVSARSTLEAKLS 546
+++PVSA+ L ++S
Sbjct: 310 PTWSVFPVSAQKGLVGRIS 328
>gi|87311777|ref|ZP_01093892.1| hypothetical protein DSM3645_20197 [Blastopirellula marina DSM
3645]
gi|87285561|gb|EAQ77480.1| hypothetical protein DSM3645_20197 [Blastopirellula marina DSM
3645]
Length = 512
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 40/174 (22%)
Query: 339 DVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRY----LKDGV 394
D+ ++ +PL E++ + +D + +V G +SGKSS++NAL G+ + G
Sbjct: 118 DLAEQLAPLREKLEIKLD-----HQRLEIVAFGTISSGKSSLLNALAGRNAFASEIAGGT 172
Query: 395 VPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQ 453
T NEI ++ D Q +I+VDTPG V + +Q
Sbjct: 173 TVTRNEIPWV----------------GDNQ------------VILVDTPGLGEVDGETRQ 204
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
+ E AD++L V+ D PL +SE L Q +K+V+ NK DLY +A
Sbjct: 205 TIAAESAKTADIILLVV--DGPLRDSEFRLLELLGQMEKRVIICFNKEDLYNDA 256
>gi|121613312|ref|YP_001000123.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|121504238|gb|EAQ73444.2| GTP-binding protein [Campylobacter jejuni subsp. jejuni 81-176]
Length = 569
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 11 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 70
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 71 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 123
>gi|442324430|ref|YP_007364451.1| hypothetical protein MYSTI_07495 [Myxococcus stipitatus DSM 14675]
gi|441492072|gb|AGC48767.1| hypothetical protein MYSTI_07495 [Myxococcus stipitatus DSM 14675]
Length = 566
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLID----AVSQIDEPFLLVIVGEYNSGKSSVINALLG 386
RS+L A++ + P + L+D V+ D P + +VG +GKS+++NAL G
Sbjct: 13 RSLLKTALE-LPPLQPHASRLDRLVDDYARGVASRDAPLAVALVGATGAGKSTLLNALAG 71
Query: 387 KRYLKDGV-VPTTNEITFL----RFSDLASEEQQRCERHPDGQYICYLPSP--ILKEMII 439
+ ++GV PT+ T +D ++ R R YLP P + +
Sbjct: 72 QPLSREGVDRPTSTTATVFAPEGATADALAKSGARVSR--------YLPGPQALWGGQVF 123
Query: 440 VDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLN 499
+DTP N + + + + RAD+ L V+ S+V FL + ++ +VF+LN
Sbjct: 124 IDTPDLNSVATTHREVARAALERADVALVVMHRGSVAEASQVEFLTEFAR-RRALVFILN 182
Query: 500 KSD 502
+D
Sbjct: 183 FAD 185
>gi|254412656|ref|ZP_05026429.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196180391|gb|EDX75382.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 517
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 28/144 (19%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERHPDG 423
L+VI G +SGK+S+INAL+G+ + G + TT++ G
Sbjct: 128 LLVVIFGTGSSGKTSLINALIGQMVGQVGAPMGTTDQ----------------------G 165
Query: 424 QYICYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
Q I ++++I DTPG V+ ++++L + ADL+LFV+ D L +SE
Sbjct: 166 QTYTLTLKGIERQILITDTPGILEAGVVGTQREQLARQLATEADLLLFVVDND--LRQSE 223
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLY 504
LR K+ + VLNK+DLY
Sbjct: 224 YEPLRRLADIGKRSLLVLNKTDLY 247
>gi|424850511|ref|ZP_18274922.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni D2600]
gi|356486779|gb|EHI16753.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni D2600]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFKDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419662149|ref|ZP_14192458.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 2008-831]
gi|380638796|gb|EIB56326.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 2008-831]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419635110|ref|ZP_14167428.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 55037]
gi|419654090|ref|ZP_14185042.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 2008-872]
gi|419681960|ref|ZP_14210762.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 140-16]
gi|419687512|ref|ZP_14215899.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1798]
gi|380613469|gb|EIB32948.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 55037]
gi|380631769|gb|EIB49923.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 2008-872]
gi|380656896|gb|EIB73026.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 140-16]
gi|380662287|gb|EIB78046.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1798]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|261406129|ref|YP_003242370.1| Dynamin family protein [Paenibacillus sp. Y412MC10]
gi|261282592|gb|ACX64563.1| Dynamin family protein [Paenibacillus sp. Y412MC10]
Length = 1213
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------------ 408
L G +++GKSS+INAL GK+ L G VPT+ + +R +
Sbjct: 50 LAFCGHFSAGKSSMINALCGKKVLPSGPVPTSANVVTIRSGEPRALIHRTVADHGEPIKV 109
Query: 409 LASEEQQRCERHPDGQYI-CYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLV 466
E + C+ + I + P+L + +++DTPG + + T + AD+V
Sbjct: 110 TIDELAEYCKEGREYSAIEVWDDVPLLGADGVLMDTPGVDSTDDGHRLATHSALHMADIV 169
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+V+ + +ES ++F + W K + ++N+ D +++
Sbjct: 170 FYVMDYNHVQSESNLMFAKSLSDWGKPLYLIVNQIDKHRD 209
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 397 TTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
TT + + ++E + C DG + Y + +++VDTPG + + R +T
Sbjct: 749 TTETVELAEYRGYVADETKSC--FVDGIDLYYSCPMTEQGIVLVDTPGADSLHARHTGVT 806
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELE 511
++ AD +++V + ++++ FL + K K+ F++N +DL Q+ EL
Sbjct: 807 FNYIKNADAIVYVTYYNHAFSKADRQFLSQLGRVKDSFALDKMFFIVNAADLAQSEDELN 866
Query: 512 EAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
E + V+ N + + + I+PVS+ + L+ K
Sbjct: 867 EVVKHVRTN-LTASGVGSPHIFPVSSLAALDNK 898
>gi|419668912|ref|ZP_14198713.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-11]
gi|380648195|gb|EIB65063.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-11]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYADQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419630117|ref|ZP_14162820.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 60004]
gi|419633019|ref|ZP_14165463.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23269]
gi|419638256|ref|ZP_14170321.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 86605]
gi|419649073|ref|ZP_14180377.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 9217]
gi|419668076|ref|ZP_14198010.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-10]
gi|419670610|ref|ZP_14200296.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-14]
gi|419679438|ref|ZP_14208441.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 87459]
gi|419696674|ref|ZP_14224508.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23210]
gi|380606159|gb|EIB26084.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 60004]
gi|380613111|gb|EIB32612.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23269]
gi|380619059|gb|EIB38161.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 86605]
gi|380625588|gb|EIB44164.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 9217]
gi|380644838|gb|EIB61963.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-10]
gi|380650400|gb|EIB67038.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-14]
gi|380657343|gb|EIB73419.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 87459]
gi|380673389|gb|EIB88394.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23210]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419628088|ref|ZP_14160963.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23263]
gi|380605687|gb|EIB25652.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23263]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419682840|ref|ZP_14211560.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1213]
gi|380660922|gb|EIB76852.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1213]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419624530|ref|ZP_14157631.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23218]
gi|380598340|gb|EIB18755.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23218]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|86153760|ref|ZP_01071963.1| GTPase of unknown function subfamily, putative [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|85842721|gb|EAQ59933.1| GTPase of unknown function subfamily, putative [Campylobacter
jejuni subsp. jejuni HB93-13]
Length = 609
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYADQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|427415904|ref|ZP_18906087.1| dynamin family protein [Leptolyngbya sp. PCC 7375]
gi|425758617|gb|EKU99469.1| dynamin family protein [Leptolyngbya sp. PCC 7375]
Length = 675
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 74/365 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------FSD------ 408
+ +V++GE GKS++INAL+G+ L V P T ++ LR ++D
Sbjct: 74 YRIVVLGEMKRGKSTLINALVGEALLPSDVNPCTALLSLLRHGPEQRVMVHYTDGKSPKA 133
Query: 409 -----------LASEEQQRCERH--PDGQYICY-LPSPILKEMI-IVDTPGTNVILQRQQ 453
+ ++E + E + PD ++ P+P+L + IVDTPG N R Q
Sbjct: 134 IDFDTFRADYTIPADEARHLETNAFPDISHVVIECPAPLLASGLEIVDTPGLNDTEARNQ 193
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQ------- 505
++ ++ A ++FV+ A +P+T E +L+ Y Q +V+N D +
Sbjct: 194 QVLS-YLNEAQAIVFVLDALQPITLDERRYLQNYIQGRDLDCFYVVNGWDRIKVGLVNPD 252
Query: 506 NAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHW 565
+A L EA ++ + L E+ + + VSA + L + S G
Sbjct: 253 DAAALTEAEQRQRQVFAQSLP-EDASWFEVSALTALRQRRQGKSLAG------------- 298
Query: 566 RINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDL 625
+ DK L SFL + S G+ +R ++A R S+ + V + +DL
Sbjct: 299 --SGVDKFLTELESFL--TQSRGQAEIR----RAAKLAHRAYSAVQESVARRIPLLDEDL 350
Query: 626 TLANEMIDSLKEYVMKMESESISWR--------RKTLSLIDSTKSRVVKLIESTLQISNL 677
+ + + S++E K+E ++R R ++ DS K+ ++ L E T +
Sbjct: 351 SELQQRVASVEEEFGKLEKIRDNYRQLIRGRCDRTAKAIADSFKTYILNL-EETFET--- 406
Query: 678 DIVAS 682
D VAS
Sbjct: 407 DFVAS 411
>gi|419625651|ref|ZP_14158664.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23223]
gi|380604511|gb|EIB24524.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23223]
Length = 609
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|88597434|ref|ZP_01100669.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|167005081|ref|ZP_02270839.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp.
jejuni 81-176]
gi|218562070|ref|YP_002343849.1| ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|317511229|ref|ZP_07968575.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 305]
gi|384447700|ref|YP_005655751.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni IA3902]
gi|403055193|ref|YP_006632598.1| ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|415733851|ref|ZP_11474349.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|419618747|ref|ZP_14152277.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 129-258]
gi|419657860|ref|ZP_14188505.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-1]
gi|419664333|ref|ZP_14194491.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-4]
gi|419675953|ref|ZP_14205206.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 110-21]
gi|419692449|ref|ZP_14220536.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1928]
gi|88190495|gb|EAQ94469.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359776|emb|CAL34562.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni NCTC 11168 = ATCC 700819]
gi|284925683|gb|ADC28035.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni IA3902]
gi|315926674|gb|EFV06053.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315929277|gb|EFV08491.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 305]
gi|380594344|gb|EIB15144.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 129-258]
gi|380634158|gb|EIB52056.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-1]
gi|380641172|gb|EIB58557.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1997-4]
gi|380651031|gb|EIB67619.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 110-21]
gi|380669659|gb|EIB84935.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1928]
gi|401780845|emb|CCK66539.1| ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
Length = 609
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419659668|ref|ZP_14190189.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 2008-979]
gi|380638881|gb|EIB56405.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 2008-979]
Length = 609
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419636992|ref|ZP_14169175.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 9879]
gi|380616202|gb|EIB35415.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 9879]
Length = 609
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419665868|ref|ZP_14195925.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380642497|gb|EIB59763.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1997-7]
Length = 609
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419646960|ref|ZP_14178407.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 53161]
gi|419684561|ref|ZP_14213155.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1577]
gi|380622363|gb|EIB41119.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 53161]
gi|380666886|gb|EIB82389.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1577]
Length = 609
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419645437|ref|ZP_14176980.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|380620339|gb|EIB39251.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 9081]
Length = 609
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|343925668|ref|ZP_08765185.1| hypothetical protein GOALK_048_00730 [Gordonia alkanivorans NBRC
16433]
gi|343764458|dbj|GAA12111.1| hypothetical protein GOALK_048_00730 [Gordonia alkanivorans NBRC
16433]
Length = 464
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 190/485 (39%), Gaps = 98/485 (20%)
Query: 340 VIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
++ + +PL + +L+ +Q+ P + +VG ++GKS+++NAL+G R V T
Sbjct: 14 LLDEVTPLAPDPALIGVLRAQLANPLTVALVGRVSAGKSTLLNALVGDR------VAPTE 67
Query: 400 EITFLRFSDLASE-EQQRCE--------------------RHPDG--QYICYLPSPILKE 436
+ + L +E QR E R P+ + Y PS +L+E
Sbjct: 68 RAECTKVAALYTEGNPQRVEVVGLDGTVTESPGTIRGDLGRRPEDIDHAVVYTPSRLLRE 127
Query: 437 MI-IVDTPG------TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
++DTPG T I R+ E +PR D++LF++ EV FL
Sbjct: 128 RFRVIDTPGLSGFTDTAEIATRRVFSGEGRLPRPDVILFLLDDAAGPKSDEVQFLADAGA 187
Query: 490 WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSS 549
+ + V++ +DL + +A + + I + A S L A+ V
Sbjct: 188 SAQNTILVISHADLIAADNPMLKAQEIARRVWRRFPAIAGAVV----AVSGLMAEAGVCG 243
Query: 550 AVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSS 609
++ +++S R + E L + LDG++ P + LL
Sbjct: 244 VTERETAQIS------RRGLLESWE--LLTILDGAAP-----------PPPGLDVDLLGR 284
Query: 610 CETLVMKDCQDAKQDLTLANEMIDSLKEYVMK---MESESISWRRKTLSLIDSTKSR--V 664
E LV DA D +A + + E++ + ++ ++ R+ L++ D K+R +
Sbjct: 285 LEELVGTYAMDAGAD--VARQGARAYCEWLHRVSGIDELRLAIGRRFLAVGDILKARTAL 342
Query: 665 VKLIESTLQISNLDI---------VASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLL 715
+L E+ + + D A + R + AA+ + +R Q D L+
Sbjct: 343 AELREAAYRATRRDAFLEAIEEAETAPELHRLREVAALEALARWQPD---------SDLI 393
Query: 716 GEYTMWLQSKNAREGRRYKESFENRWPSLVYLQPQVYPDMYELVRKVDGYSSRVIEDFSA 775
GE T+ + S++ R L+ L P P K R F+A
Sbjct: 394 GELTLVVASRDVR--------------LLLSLPPNAAPPQIADAAKERATDCRTRRAFAA 439
Query: 776 SSTSK 780
+S K
Sbjct: 440 TSAEK 444
>gi|421526199|ref|ZP_15972808.1| thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum ChDC
F128]
gi|402257958|gb|EJU08431.1| thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum ChDC
F128]
Length = 206
Score = 59.3 bits (142), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+EA+ V IV L S K YE A +K + K+ LF+I +R+DIA A
Sbjct: 19 GKDFYSCIEEAIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VGADGVHLGQSDMPIEEARKILKDKF-------LIGATARNIEEAKRAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + + +VKIP+F + + +V G G
Sbjct: 131 AIFGTSTKDNAKKLEMEELKKIVASVKIPVFAIGGININNVGSLKNIGLQGICAV----- 185
Query: 269 LFNDGVLSQMFC 280
G+LS+ C
Sbjct: 186 ---SGILSEKNC 194
>gi|398815578|ref|ZP_10574245.1| dynamin family protein, partial [Brevibacillus sp. BC25]
gi|398034368|gb|EJL27638.1| dynamin family protein, partial [Brevibacillus sp. BC25]
Length = 347
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRA 463
F ++E++ C +YI + P+ + +++VDTPG + I R + E++ A
Sbjct: 177 FKGFVAKEEKACF----AEYIELFYSCPLTDQGIVLVDTPGADSINARHTGVAFEYMKNA 232
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D VLFV + +++ FL + K K+ F++N DL N EL+ I+ V+
Sbjct: 233 DAVLFVTYYNHAFAQADREFLLQMGRVKDTFEMDKMFFIVNACDLAANDEELQGVITHVE 292
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKL 545
+N + I IYPVS+++ L A++
Sbjct: 293 KNLLS-CGIRLPRIYPVSSQTALLARM 318
>gi|358466002|ref|ZP_09175873.1| hypothetical protein HMPREF9093_00334 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069483|gb|EHI79390.1| hypothetical protein HMPREF9093_00334 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 206
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D + I+EA+ V V L S K YE A +K + K+ LF+I +R+DIA A
Sbjct: 19 GKDFYNCIEEAIKGGVRTVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNAS------SSEGA 210
V A GV L +P AR +KD L+G + ++ A A GA
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATARNVEEAKRAELLGANYIGSGA 131
Query: 211 DFLVCCFGEGQKADVIE-NSLFTNVKIPIFIMNASPLVDVSKFLKSGASG 259
F +K ++ E + N+KIP+F + + +VS G G
Sbjct: 132 IFGTNTKDNAKKLEMEELKKIVANIKIPVFAIGGININNVSSLKNIGLQG 181
>gi|89096868|ref|ZP_01169759.1| hypothetical protein B14911_18225 [Bacillus sp. NRRL B-14911]
gi|89088248|gb|EAR67358.1| hypothetical protein B14911_18225 [Bacillus sp. NRRL B-14911]
Length = 894
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 152/358 (42%), Gaps = 64/358 (17%)
Query: 341 IKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL---------- 390
+K PL + + +++ + +D +LV G SGKS+ IN +LGK L
Sbjct: 340 LKNDLPLGQRLEWIVEELLDLDNSHVLV-AGRPGSGKSAFINYVLGKPVLGEDTSSISMF 398
Query: 391 KDGVVPTTNEIT---FLRFSDLASEEQQRCERHPDGQYI---CYLPSPILKE--MIIVDT 442
K G +E+T + DL ++ +G+ + C +P P L+E + ++DT
Sbjct: 399 KAGEDAAFSEVTDSRLIMMKDLPQYQENEAAAGLEGEKVAFNCRVPVPFLQENRIALIDT 458
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK--KKVVFVLNK 500
PG + L ++P AD +L+VI+A L E +++ L ++ KKV F+LNK
Sbjct: 459 PGVKGSGRASGELA-HYLPLADSILYVINAAEGLVEEDLLALERIRESAPFKKVHFLLNK 517
Query: 501 SDLYQNAFELEEAISFV----------------------KENTMKL-------------- 524
D + E E + + +E L
Sbjct: 518 VDAIHDQREAERLVDEISAQVRSYFPQGKVFAFSSHYGSREQLADLAGFFDDSLSRDWYE 577
Query: 525 LNIENVTIYPVSARST-LEAKLSVSSAVGKD--HSELSVNDSHWRINTFDKLEKLLYSFL 581
L ++V +Y A S L+ ++ V +++ +D +E V + IN +E+ +
Sbjct: 578 LRTQSVLVYIQRALSYLLDKRVEVENSLQEDIRWNEEMVTKLNGAINQLSDIEEEKTRTI 637
Query: 582 DGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYV 639
S + K+RMR KLE I +L LV +D K L L + M + +++Y+
Sbjct: 638 TKSYQSIKDRMRKKLEEEI---PGILRGTSELVTEDSDFRKIHLELNDAMNERVQQYL 692
>gi|410459684|ref|ZP_11313414.1| dynamin family protein [Bacillus azotoformans LMG 9581]
gi|409929842|gb|EKN66885.1| dynamin family protein [Bacillus azotoformans LMG 9581]
Length = 1224
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRA 463
F D ++E++ C ++I Y P+ ++ I +VDTPG + I R + E++ A
Sbjct: 771 FEDYVAKEEKSCFV----EWIELYYDCPLTEQGITLVDTPGADSINARHTGVAFEYIKNA 826
Query: 464 DLVLFVISADRPLTESEVVFL----RYTQQWK-KKVVFVLNKSDLYQNAFELEEAISFVK 518
D +LFV + + ++ FL R + ++ K+ F++N +DL ++ EL+ + +V
Sbjct: 827 DAILFVTYYNHAFSRADREFLIQLGRVKEAFEMDKMFFIVNAADLAKSEEELKLVVDYVG 886
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLY 578
+ +K I IYP+S++ LE KL GK S S RI F E+ Y
Sbjct: 887 -DELKKFGIRFPRIYPLSSKMALEEKLQAKE--GKSVS------SESRITAF---EQAFY 934
Query: 579 SFL 581
SF+
Sbjct: 935 SFI 937
>gi|147678355|ref|YP_001212570.1| hypothetical protein PTH_2020 [Pelotomaculum thermopropionicum SI]
gi|146274452|dbj|BAF60201.1| hypothetical protein PTH_2020 [Pelotomaculum thermopropionicum SI]
Length = 429
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 36/223 (16%)
Query: 355 IDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD-----L 409
+ +S D +VI+G +NSGKS+++N+LL + G++PTT+ + +
Sbjct: 14 LKQISGQDYRPCVVILGSFNSGKSTLLNSLLEEDVSPVGIIPTTSCLMHFTYGSTFKART 73
Query: 410 ASEEQQRCERHPD-------------GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLT 456
+ ++R H + G+ +PS ILK+ +VDTPG + RL
Sbjct: 74 SGSGEKRVFHHKEQLYSFLAKVGLAGGRVDVEMPSGILKKCRLVDTPGIDSPGGDAGRLA 133
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKK----VVFVLNKSDLYQNAFELE 511
E+ AD ++++ R + + VFL R WKKK + F +N + + LE
Sbjct: 134 EQAAAEADKIIYLFH-QRGIEDYNRVFLYRLASLWKKKSLSDISFWINCNLGPCDGTSLE 192
Query: 512 EAISFVKE--------NTMKLLNIENVTIYPVSARSTLEAKLS 546
S ++E NT+ ENV + R LE +L+
Sbjct: 193 TTRSALREIFLSQVRLNTINTAKRENVEML----RKFLEVELA 231
>gi|430747007|ref|YP_007206136.1| small GTP-binding protein domain-containing protein [Singulisphaera
acidiphila DSM 18658]
gi|430018727|gb|AGA30441.1| small GTP-binding protein domain protein [Singulisphaera acidiphila
DSM 18658]
Length = 478
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
G + GKSSV+NALLG K G TT+ T R S QR E ++ P
Sbjct: 86 GMVSRGKSSVLNALLGHEVFKVG---TTHGTTVSRTS-------QRWEHSATSEH----P 131
Query: 431 SPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
+++VDTPG + V + ++ L E ADL+LFV+S+D + E+ L +Q
Sbjct: 132 GLEGARLVLVDTPGIDEVGGEVRETLAREVARHADLILFVVSSD--MQRCELEALSQLRQ 189
Query: 490 WKKKVVFVLNKSDLY 504
+K ++ V N+ D Y
Sbjct: 190 VQKPIILVFNQIDRY 204
>gi|419698368|ref|ZP_14226081.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23211]
gi|380675190|gb|EIB90103.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni LMG 23211]
Length = 609
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D + I+G+++SGKSS++N +LG+ L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDRNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|430750007|ref|YP_007212915.1| dynamin family protein [Thermobacillus composti KWC4]
gi|430733972|gb|AGA57917.1| dynamin family protein [Thermobacillus composti KWC4]
Length = 1231
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 358 VSQIDEPFLLV-IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------LA 410
+ ++ EPF V G +++GKS+++N L G R L +PT+ + +R + LA
Sbjct: 38 IGKLAEPFAQVAFCGHFSAGKSTLVNRLCGSRLLPSNPIPTSANVVTIRHGEPKAVIRLA 97
Query: 411 SEEQQRCERHP---------DGQYI----CYLPSPILKEMI-IVDTPGTNVILQRQQRLT 456
+ + P DG+ + Y P+ +L+ + ++DTPG + + T
Sbjct: 98 RDGRSETRTVPLDELEAHCRDGEGVESIELYHPAALLEGGVALLDTPGIDSTDDAHKLAT 157
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
E + AD+V +V+ + +E F + W K +V ++++ D ++ A
Sbjct: 158 ESALHLADVVCYVMDYNHVQSEINFEFAKRLADWGKPLVLIVSQVDKHREA 208
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 72/124 (58%), Gaps = 7/124 (5%)
Query: 428 YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-- 484
Y+ SP+ + +++VDTPG + + R + ++ AD +LFV + ++++ FL
Sbjct: 792 YIDSPLTAQGIVLVDTPGADSVNARHTDVAFHYIKNADAILFVTYYNHAFSQADRRFLTQ 851
Query: 485 --RYTQQWK-KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
R Q++ K+ F++N +DL + EL++ I+ V+ N +K I + ++PVS+ + L
Sbjct: 852 LGRVKDQFELDKMFFIVNAADLAADEAELKDVIAHVEANLLK-HGIRHPRMFPVSSLAAL 910
Query: 542 EAKL 545
+AKL
Sbjct: 911 DAKL 914
>gi|119897051|ref|YP_932264.1| hypothetical protein azo0760 [Azoarcus sp. BH72]
gi|119669464|emb|CAL93377.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 655
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++++DTPG N I + LT +P A VLF+++AD +T S++
Sbjct: 194 VIQFPHPLLEQGLVVLDTPGLNAI-GAEPELTLSMLPNAHAVLFILAADTGVTHSDLAVW 252
Query: 485 RYTQQ----WKKKVVFVLNKSDLYQNAF--------ELEEAISFVKENTMKLLNIENVTI 532
R+ +K + VLNK D + EL+ ++ V E L IE T+
Sbjct: 253 RHYVHAGAGGQKGRLVVLNKIDGLWDGLRDQARIDAELDRQVANVAET----LEIEPATV 308
Query: 533 YPVSARSTLEAKLSVSSAV 551
+PVSA+ L A+++ +A+
Sbjct: 309 FPVSAQKGLVARVTRDAAL 327
>gi|153952488|ref|YP_001398546.1| GTP-binding protein [Campylobacter jejuni subsp. doylei 269.97]
gi|152939934|gb|ABS44675.1| GTP-binding protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 569
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 11 LKELVFSLDRNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 70
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+LK++ +VDTPG N
Sbjct: 71 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLKKITLVDTPGLN 123
>gi|88602386|ref|YP_502564.1| GTP-binding protein, HSR1-like protein [Methanospirillum hungatei
JF-1]
gi|88187848|gb|ABD40845.1| GTP-binding protein, HSR1-related protein [Methanospirillum
hungatei JF-1]
Length = 664
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 31/215 (14%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD- 408
++S ++D+ D+ F + + G +SGKSS++NA+LG+ L GV P T +R+SD
Sbjct: 191 QISSILDSAD--DQVFEIAVFGRVSSGKSSLLNAILGEDLLPVGVTPVTALPIHIRWSDK 248
Query: 409 ----------------------LASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGT 445
A+E+ + I LP+ L E + DTPG
Sbjct: 249 REILVTFVDKNPIVCPPEDLFLYATEQHNPSNSRHVTRIIARLPAHRLLEGVGFADTPGL 308
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ LT ++P DL + +I A LT ++ + Q V +++K DL
Sbjct: 309 GSLATSGAALTRAYLPSCDLGIVLIDAGSTLTAEDIQTVYSLQSAGIPVQILVSKGDLLS 368
Query: 506 NAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
+ EE++S E + + YPV ST
Sbjct: 369 D----EESLSLC-EYISSQITVRCDVHYPVHLVST 398
>gi|254436540|ref|ZP_05050034.1| hypothetical protein OA307_1410 [Octadecabacter antarcticus 307]
gi|198251986|gb|EDY76300.1| hypothetical protein OA307_1410 [Octadecabacter antarcticus 307]
Length = 439
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 369 IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ-----------QRC 417
++G ++SGKS+ +N LLG K GV PT + T + + ++
Sbjct: 1 MLGNHSSGKSTFVNHLLGMEVQKTGVAPTDDNFTIITYGPHETDRDGPSVVSNPDLPYEG 60
Query: 418 ERHPDGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQR---------LTEEFVPRA 463
RH Q + ++ P+ +L+ + ++D+PG +I + ++ + F RA
Sbjct: 61 LRHFGDQLVSHIRLKLQPADLLRTVTLIDSPG--MIDEAKEENGRGFDFPGVVRWFADRA 118
Query: 464 DLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENT 521
DLV+ D+P T E VF K++ VLNK D QN + A + N
Sbjct: 119 DLVMIFFDPDKPGTTGETLQVFKESLNGIDHKLLIVLNKMDQCQNLHDFARAYGALCWNL 178
Query: 522 MKLL 525
K++
Sbjct: 179 GKVI 182
>gi|56963821|ref|YP_175552.1| GTPase [Bacillus clausii KSM-K16]
gi|56910064|dbj|BAD64591.1| GTPase [Bacillus clausii KSM-K16]
Length = 1195
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 360 QIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL------ASEE 413
+ + F L G +++GKS+++N LLG L +PT+ + D+ AS E
Sbjct: 24 ETKQSFRLAFSGHFSAGKSTLLNELLGAPLLPTSPIPTSANQVIIGQGDIRVVLEKASGE 83
Query: 414 QQRCERHPDGQYI--------------CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEE 458
++ + D + Y P P LK ++DTPG + QR+T +
Sbjct: 84 EENWQGAIDWDAVKRSGMDGTKIKRLRIYAPIPFLKHGSELMDTPGVDSTDPTHQRVTLD 143
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
+ D ++FV+ + E+ + FL+ K + V+N+ D ++ E +SF
Sbjct: 144 ALYTTDAIVFVMDYNHVKAETNLYFLKQLSTEGKPLFLVINQIDKHE-----EGELSFAA 198
Query: 519 -----ENTMKLLNIENVTIYPVSARST 540
E+T+K I VTIY S + T
Sbjct: 199 YRESIESTLKEWGIRYVTIYYTSMKKT 225
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 425 YICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
Y C L + L +VDTPG N I R + E V R+D + +V + ++++ F+
Sbjct: 759 YDCLLTTQGL---TLVDTPGVNSIHGRHTNVAYEQVRRSDAIFYVTYYNHSFSKTDARFI 815
Query: 485 RYTQQWKK-----KVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ K K+ FVLN DL N E + ++V +++ +EN +YP+S++
Sbjct: 816 EQLGKINKQFTSNKLYFVLNAVDLAANQSEQKGVEAYVL-RSLQSAGVENAALYPISSKI 874
Query: 540 TLEAKLSVSSAVG 552
L K + G
Sbjct: 875 ALAEKRAGKPVTG 887
>gi|255020679|ref|ZP_05292741.1| hypothetical protein ACA_0548 [Acidithiobacillus caldus ATCC 51756]
gi|254969915|gb|EET27415.1| hypothetical protein ACA_0548 [Acidithiobacillus caldus ATCC 51756]
Length = 657
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 8/125 (6%)
Query: 428 YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLR 485
+LP PIL + I+DTPG N I + LT + AD VLFV+ D +T+S++ ++ +
Sbjct: 211 FLPHPILDAGLTILDTPGLNAI-GAEPELTFGMLADADAVLFVLGIDTGVTQSDLTIWDQ 269
Query: 486 YTQQWKKKVVFVL-NKSDLY----QNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
Y ++ K++ VL NK D ++ FE+E+ IS E T + L I+ + PVS +
Sbjct: 270 YLRRNKEQPQLVLLNKIDTLWDELRDPFEIEDEISMQVEKTAQRLGIDAERVLPVSGQKA 329
Query: 541 LEAKL 545
L A++
Sbjct: 330 LLARI 334
>gi|340781212|ref|YP_004747819.1| hypothetical protein Atc_0469 [Acidithiobacillus caldus SM-1]
gi|340555365|gb|AEK57119.1| conserved hypothetical protein [Acidithiobacillus caldus SM-1]
Length = 657
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 8/125 (6%)
Query: 428 YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLR 485
+LP PIL + I+DTPG N I + LT + AD VLFV+ D +T+S++ ++ +
Sbjct: 211 FLPHPILDAGLTILDTPGLNAI-GAEPELTFGMLADADAVLFVLGIDTGVTQSDLTIWDQ 269
Query: 486 YTQQWKKKVVFVL-NKSDLY----QNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
Y ++ K++ VL NK D ++ FE+E+ IS E T + L I+ + PVS +
Sbjct: 270 YLRRNKEQPQLVLLNKIDTLWDELRDPFEIEDEISMQVEKTAQRLGIDAERVLPVSGQKA 329
Query: 541 LEAKL 545
L A++
Sbjct: 330 LLARI 334
>gi|338532045|ref|YP_004665379.1| hypothetical protein LILAB_11960 [Myxococcus fulvus HW-1]
gi|337258141|gb|AEI64301.1| hypothetical protein LILAB_11960 [Myxococcus fulvus HW-1]
Length = 565
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLID----AVSQIDEPFLLVIVGEYNSGKSSVINALLG 386
RS+L A++ + P + L+D V++ D P + +VG +GKS+++NAL G
Sbjct: 13 RSLLKTALE-LPALGPHAARLERLVDDYARGVARKDAPLSVALVGATGAGKSTLLNALAG 71
Query: 387 KRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSP--ILKEMIIVDTP 443
+ ++GV PT+ T ++ + I Y P P + + +DTP
Sbjct: 72 QALSREGVNRPTSTAATVFAPEGTPTDALAGS----GARVITYAPGPQGLWGGQVFIDTP 127
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
N + + + + RAD+ L V+ S+V FL + ++ +VF+LN +D
Sbjct: 128 DLNSVATTHREVARAALERADVALVVMHRGSVAEASQVEFLTEFAR-RRALVFILNFAD 185
>gi|392391115|ref|YP_006427718.1| dynamin family protein [Ornithobacterium rhinotracheale DSM 15997]
gi|390522193|gb|AFL97924.1| dynamin family protein [Ornithobacterium rhinotracheale DSM 15997]
Length = 667
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 422 DGQYIC-------YLPSPILKEMIIVDTPGTNV-ILQRQQRLTEEFVPRADLVLFVISAD 473
DG+YI Y P LK + IVDTPG N I+ R++R T+EF+ +AD VL ++ A
Sbjct: 167 DGKYISITKAVKIYYPKEYLKGVEIVDTPGFNDPIVSREER-TKEFLEKADAVLLMLYAG 225
Query: 474 RPL--TESEVVFLRYTQQWKKKVVFVLNKSDL-YQNAFELEEAISFVKE 519
RP T+ ++F + KV+ +NK D+ Y+N +EE +VK+
Sbjct: 226 RPFDSTDRSILFENVGKCGIGKVIIGINKYDIAYENGDTIEEINEYVKQ 274
>gi|336399853|ref|ZP_08580652.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 21_1A]
gi|336163493|gb|EGN66416.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 21_1A]
Length = 206
Score = 58.5 bits (140), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+E++ V IV L S K YE A +K + K LF+I +R+DIA A
Sbjct: 19 GKDFYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKSYGVLFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATARNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + + +VKIP+F + +VS G G V S+
Sbjct: 131 AIFGTSTKDNAKKLEMEDLKKIVNSVKIPVFAIGGINTNNVSMLKNIGLQG-VCSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 ----GILSEKDCKKAVEN 200
>gi|414342777|ref|YP_006984298.1| hypothetical protein B932_1798 [Gluconobacter oxydans H24]
gi|411028112|gb|AFW01367.1| hypothetical protein B932_1798 [Gluconobacter oxydans H24]
Length = 550
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL-------------------- 404
F + +VG Y+ GKS+++NA++G L GV P T+ IT +
Sbjct: 42 FNVAVVGRYSRGKSTLLNAMIGGARLPMGVEPLTSVITSIAYGSEEKVVAHFRGTSLIED 101
Query: 405 ----RFSDLASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEF 459
R D +E R + +P+ IL+ VDTPG I++ T F
Sbjct: 102 IPLSRLPDYVTEYGNPGNRRRIEEAEILIPATILRSGFRFVDTPGLGSIVRANTETTRVF 161
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
+ DL +FV S D L E L+ + K + VLNK DL + E ++E
Sbjct: 162 LDEIDLFVFVSSCDAALDPEERDILQDVARVGKPLFPVLNKVDLV-SPEETSRKERALRE 220
Query: 520 NTMKLLNIENVTIYPVSARSTLEAKLSVSSAV 551
+L + P+SA++ L A+ S A
Sbjct: 221 VLDRLGCTAVHEVIPLSAQNGLTARASGDDAA 252
>gi|403069053|ref|ZP_10910385.1| hypothetical protein ONdio_05600 [Oceanobacillus sp. Ndiop]
Length = 1215
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 340 VIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALL-GKRYLKDGVVPTT 398
+ KK SP EE L++ V Q ++ L + N S + A++ G + ++ + +
Sbjct: 695 ITKKFSPPAEEFEKLMEWV-QTNQ---LQKSDQLNKMYQSYLQAMINGYKEMQQNIGKSI 750
Query: 399 NEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTE 457
IT F ++E + C Y I ++ I +VDTPG + + R +
Sbjct: 751 T-ITIEDFESFVTDESKACYMESIN---LYYDCEITRQGITLVDTPGADSVNARHTNVAF 806
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVLNKSDLYQNAFELEE 512
+++ AD +L+V + L+ ++ FL + K+ K+ F++N +DL + EL+
Sbjct: 807 DYIKHADAILYVTYYNHALSRADKDFLMQLGRVKEAFQLDKMFFIVNAADLAADEEELKL 866
Query: 513 AISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
+VKE ++LL I +YPVS++++L+ K+
Sbjct: 867 VTDYVKEQ-LQLLGIRLPRLYPVSSKASLDDKV 898
>gi|260887382|ref|ZP_05898645.1| dynamin family protein, partial [Selenomonas sputigena ATCC 35185]
gi|260862851|gb|EEX77351.1| dynamin family protein [Selenomonas sputigena ATCC 35185]
Length = 609
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 36/179 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP--- 421
F + G +++GKS +IN LLG L +PT+ + ++R + +E + R E P
Sbjct: 65 FGVAFCGHFSAGKSRMINRLLGAMLLPSSPIPTSANLVYVRHGEEYAEARFR-EGRPRRY 123
Query: 422 --------------DGQYI---------CYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
DG I LP+ + +++DTPG + + TEE
Sbjct: 124 LAPYDYDLVKSFCRDGTAIESIEISTAAASLPAGV----VLMDTPGIDSTDAAHRLATEE 179
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
+ ADL+ +V+ + +E +F + + K+V V+N+ D ++ EE +SF
Sbjct: 180 AIHLADLIFYVMDYNHVQSEESFLFTKSLTEAGKRVALVINQIDKHR-----EEELSFA 233
>gi|86610325|ref|YP_479087.1| GTP-binding domain-containing protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558867|gb|ABD03824.1| GTP-binding domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 407
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 25/145 (17%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
F + + G N GKS+V+NAL G+ LK G + N +T + P Q
Sbjct: 47 FSIAVFGLVNRGKSAVLNALTGEERLKVGPL---NGVT----------------QQP--Q 85
Query: 425 YICYLPSP-ILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ + P P I + +VDTPG N V + +++L + ADL++FVI+ D LT+ E
Sbjct: 86 SLLWQPGPGIPWRVRLVDTPGLNEVEGEAREQLAWDVARSADLIVFVIATD--LTQLEYQ 143
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQNA 507
L + K ++ VLNK DLY A
Sbjct: 144 ALSELRTLHKPILLVLNKCDLYSEA 168
>gi|428781296|ref|YP_007173082.1| small GTP-binding protein domain-containing protein
[Dactylococcopsis salina PCC 8305]
gi|428695575|gb|AFZ51725.1| small GTP-binding protein domain protein [Dactylococcopsis salina
PCC 8305]
Length = 456
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 25/158 (15%)
Query: 349 EEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
E++ ++ A ++DE + + G + GKS+V+NAL+GK+ + G V N +T
Sbjct: 47 EDLQIIKAAYEKLDETVIRIATFGLVSRGKSAVVNALVGKKVMTTGPV---NGVT----- 98
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLV 466
R P Q I + PS ++ ++DTPG + V + + + +ADL+
Sbjct: 99 -----------RWP--QTIRWTPSSGKVQIELIDTPGLDEVEGEERAAMARTIAQQADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
LF+++ D +T +E L ++ KK ++ V NK DLY
Sbjct: 146 LFIVAGD--ITRTEYRGLCELREAKKPILLVFNKVDLY 181
>gi|448565419|ref|ZP_21636286.1| thiamine-phosphate pyrophosphorylase [Haloferax prahovense DSM
18310]
gi|445715163|gb|ELZ66919.1| thiamine-phosphate pyrophosphorylase [Haloferax prahovense DSM
18310]
Length = 205
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
G D++ AV V +V L AS + YE +++V D + L+ +RVDIAA
Sbjct: 8 GGRSTPDVVQAAVDGGVDVVQLREKHASARDRYEVGREVRAVTADAGVPLVVNDRVDIAA 67
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
A++A GV L D +P VAR + D +VGR+V T+ A A + GAD+L
Sbjct: 68 AIDADGVHLGDDDVPVSVAREQLGDD-------AIVGRSVSTVTGARTAEEA-GADYL 117
>gi|239909165|ref|YP_002955907.1| hypothetical protein DMR_45300 [Desulfovibrio magneticus RS-1]
gi|239799032|dbj|BAH78021.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 549
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLLID---AVSQIDEPFLLVIVGEYNSGKSSV 380
K+ ++ E +L+EA+ +K + + L+ + +SQI L+ I+G +++GKS+
Sbjct: 63 KEHLQLENPLLVEAVGSFRKLDKVCRGLGLIGNDQSTISQIAWWPLISILGPFSAGKSTF 122
Query: 381 INALL-------GKRYLKDG-------------VVPTTNEITFLRFSDLA-SEEQQRCER 419
IN L G + D V+P T LRF SEE ++ E
Sbjct: 123 INNYLDIPVQQTGSHAVDDKFTVICYNAAGESRVLPGTALNADLRFPFYKMSEELEKVEP 182
Query: 420 HPDGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQ--RLTEEFVPRADLVLFVISA 472
G+ Y+ PS L+ +I++D+PG + QR R+T + +DLVL + A
Sbjct: 183 GEGGRIDSYIRLKTCPSDKLRGLILIDSPGFDADAQRTSTLRITNHIMDLSDLVLVLFDA 242
Query: 473 DRPL------TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
RP T + +V ++ K +F+LN+ D+ EE +
Sbjct: 243 RRPEPGAMRDTLTHLVAATINRRDSNKFIFILNQMDIAAREDNPEEVVG 291
>gi|395204037|ref|ZP_10395080.1| LOW QUALITY PROTEIN: ATP/GTP-binding family protein
[Propionibacterium humerusii P08]
gi|422439731|ref|ZP_16516552.1| ATP/GTP-binding family protein [Propionibacterium acnes HL037PA3]
gi|422471664|ref|ZP_16548155.1| ATP/GTP-binding family protein [Propionibacterium acnes HL037PA2]
gi|422571988|ref|ZP_16647565.1| ATP/GTP-binding family protein [Propionibacterium acnes HL044PA1]
gi|313836683|gb|EFS74397.1| ATP/GTP-binding family protein [Propionibacterium acnes HL037PA2]
gi|314929911|gb|EFS93742.1| ATP/GTP-binding family protein [Propionibacterium acnes HL044PA1]
gi|314972339|gb|EFT16436.1| ATP/GTP-binding family protein [Propionibacterium acnes HL037PA3]
gi|328907768|gb|EGG27532.1| LOW QUALITY PROTEIN: ATP/GTP-binding family protein
[Propionibacterium humerusii P08]
Length = 621
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + SD L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTRPGVIRPTTTSPVLVHHSDDALWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + R + D + + P I + + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLVRSRVASN-DASSLQLVAEPEIPRGLAILDAPDIDSVVARNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q+ V V N+
Sbjct: 173 VTSAARYADAVPWDFLEEAQERHASVTVVCNR 204
>gi|226313983|ref|YP_002773879.1| hypothetical protein BBR47_43980 [Brevibacillus brevis NBRC 100599]
gi|226096933|dbj|BAH45375.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 655
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRA 463
F ++E++ C +YI + P+ + +++VDTPG + I R + E++ A
Sbjct: 177 FKGFVAKEEKAC----FAEYIELFYSCPLTDQGIVLVDTPGADSINARHTGVAFEYMKNA 232
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D VLFV + ++++ FL + K K+ F++N DL N EL+ I+ V+
Sbjct: 233 DAVLFVTYYNHAFSQADREFLLQMGRVKDTFEMDKMFFIVNACDLAANDEELQGVITHVE 292
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKL 545
+N + I IYPVS+++ L A++
Sbjct: 293 KNLLS-CGIRLPRIYPVSSQTALLARM 318
>gi|445494487|ref|ZP_21461531.1| GTPase domain-containing protein [Janthinobacterium sp. HH01]
gi|444790648|gb|ELX12195.1| GTPase domain-containing protein [Janthinobacterium sp. HH01]
Length = 642
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 192 IINFPHPLLKQGLVILDTPGLNAI-GTEPELTLNLIPNAHAVLFILAADTGVTKSDIEVW 250
Query: 485 RYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE----NTMKLLNIENVTIYPVSARST 540
R + VLNK D + E ++ E N +L +E ++PVSA+
Sbjct: 251 RNHIGAGAGRLVVLNKIDSMWDELRSEAEVNLEIERQQANVAHVLALEPRQVFPVSAQKA 310
Query: 541 LEAKLSVSSAV 551
L K++ A+
Sbjct: 311 LVGKITQDPAL 321
>gi|251796490|ref|YP_003011221.1| dynamin [Paenibacillus sp. JDR-2]
gi|247544116|gb|ACT01135.1| Dynamin family protein [Paenibacillus sp. JDR-2]
Length = 1222
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 406 FSDLASEEQQRC-----ERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEF 459
+ +EE + C E H Y C P+ ++ +++VDTPG + + R + +
Sbjct: 766 YEKFVAEESRSCFVSEIELH----YDC----PLTRQGIVLVDTPGADSVNARHTGVAFNY 817
Query: 460 VPRADLVLFVISADRPLTESEVVFL----RYTQQWK-KKVVFVLNKSDLYQNAFELEEAI 514
+ AD VLFV + ++++ FL R Q++ K+ F++N +DL + ELE +
Sbjct: 818 IKNADAVLFVTYYNHAFSQADRQFLMQLGRVKDQFELDKMFFLVNAADLAADEEELEGVL 877
Query: 515 SFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
S V+ N ++ I N ++PVS+ L+AK+
Sbjct: 878 SHVETNLLQ-HGIRNPRLFPVSSLQGLDAKM 907
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEE------------- 413
+ G +++GKS+++N L G + L +PT+ + +R + A
Sbjct: 46 VAFCGHFSAGKSTLVNRLCGAQLLPSSPIPTSANVVAIRGGETAKASVVSVKNGEHVSVD 105
Query: 414 ---QQRCERHPDGQYI----CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADL 465
+Q DG+ I Y P+ L + +++DTPG + + TE + AD+
Sbjct: 106 IPLEQLDAYCKDGENIESVSIYYPTDRLGDHTVLLDTPGIDSTDDAHRMSTESALHLADV 165
Query: 466 VLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
V +V+ + +E F + + W K + F++N+ D +++
Sbjct: 166 VFYVMDYNHVQSEINFAFAKQLKDWGKPLYFIVNQIDKHRD 206
>gi|404257164|ref|ZP_10960491.1| hypothetical protein GONAM_06_00100 [Gordonia namibiensis NBRC
108229]
gi|403404158|dbj|GAB98900.1| hypothetical protein GONAM_06_00100 [Gordonia namibiensis NBRC
108229]
Length = 460
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 177/433 (40%), Gaps = 84/433 (19%)
Query: 340 VIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
++ + +PL + +L+ +Q+ P + +VG ++GKS+++NAL+G R V T+
Sbjct: 10 LLDEVTPLAPDPTLIGSLRAQLANPLTVALVGRVSAGKSTLLNALVGDR------VAPTD 63
Query: 400 EITFLRFSDLASE-EQQRCE--------------------RHPDG--QYICYLPSPILKE 436
+ + L +E QR E R P+ + Y PS +L+E
Sbjct: 64 RAECTKVAALYTEGNPQRVEVVGLDGTVTEIPGTMRGDLGRKPEDIDHAVVYTPSRLLRE 123
Query: 437 MI-IVDTPG------TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
++DTPG T I R+ + +PR D++LF++ EV FL
Sbjct: 124 RFRVIDTPGLSGFTDTAEIATRRVFSGDGRLPRPDVILFLLDDAAGPKADEVQFLSDAGA 183
Query: 490 WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSS 549
+ + V++ +DL + +A + + I + A S L A+ V
Sbjct: 184 SAQNTILVISHADLIAADNPMLKAQEIARRVWRRFPAIAGAVV----AVSGLMAEAGVCG 239
Query: 550 AVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSS 609
++ +++S R + E L + LDG++ P + LL
Sbjct: 240 VTERETAQIS------RRGLLEPWE--LLTILDGAAP-----------PPPGLDVDLLGR 280
Query: 610 CETLVMKDCQDAKQDLTLANEMIDSLKEYVMK---MESESISWRRKTLSLIDSTKSRVV- 665
E LV DA D A + + E++ + ++ ++ R+ L++ D K+R V
Sbjct: 281 LEELVGTYAMDAGAD--AARQGARAYCEWLHRVSGIDELRLAIGRRFLAVGDILKARTVL 338
Query: 666 -KLIESTLQISNLDI---------VASYVFRGEKSAAMPSTSRIQHDIIGPALLDTQKLL 715
+L E+ + + D+ A + R + AA+ + +R Q D L+
Sbjct: 339 AELREAAYRSARRDVFLEAIEEAETAPELHRLREVAALEALARWQPD---------SDLI 389
Query: 716 GEYTMWLQSKNAR 728
GE + + S++ R
Sbjct: 390 GELNLVVASRDVR 402
>gi|332710888|ref|ZP_08430825.1| small GTP-binding protein domain protein [Moorea producens 3L]
gi|332350441|gb|EGJ30044.1| small GTP-binding protein domain protein [Moorea producens 3L]
Length = 473
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 26/161 (16%)
Query: 347 LMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFL 404
L E+ +L ++ ++D+ + + G + GKS+VINALLG++ LK G + T +
Sbjct: 62 LQTELEVLQSSLDKLDQGLIRIAAFGLVSRGKSAVINALLGQKILKTGPIHGVTQWPKSV 121
Query: 405 RFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRA 463
R++ + E +L E+I DTPG + I + + ++ E V +A
Sbjct: 122 RWTPSSESE-------------------VLFELI--DTPGLDEIHGEVKAQMAREVVSQA 160
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
DL+LFV++ D +T +E L +Q +K ++ V NK DLY
Sbjct: 161 DLILFVVAGD--ITRTEYQALCELRQSQKPLILVFNKIDLY 199
>gi|357011239|ref|ZP_09076238.1| hypothetical protein PelgB_17365, partial [Paenibacillus elgii B69]
Length = 582
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 427 CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
Y +P+ ++ +++VDTPG + I R + +++ AD +LFV + + ++ FL
Sbjct: 147 LYYANPLTEQGVVLVDTPGADSINARHTGVAFDYIKNADAILFVTYYNHAFSHADKEFLL 206
Query: 486 YTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
+ K K+ F++N +DL +A ELE + V+ N ++ I + IYP+S+
Sbjct: 207 QLGRVKDSFELDKMFFIVNAADLASSAEELEGVVKHVETNLLQ-HGIRHPRIYPLSSYYA 265
Query: 541 LEAKL 545
LE K+
Sbjct: 266 LEGKI 270
>gi|187927362|ref|YP_001897849.1| hypothetical protein Rpic_0255 [Ralstonia pickettii 12J]
gi|309779937|ref|ZP_07674691.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|187724252|gb|ACD25417.1| conserved hypothetical protein [Ralstonia pickettii 12J]
gi|308921296|gb|EFP66939.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 648
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 197 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 255
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE----NTMKLLNIENVTIYPVSAR 538
R +K + VLNK D + + EE + T ++L+I+ +YPVSA+
Sbjct: 256 RSHVGGGQRKGCIAVLNKVDGLWDPLKSEEEVENEVSRQIMTTAQVLDIDVERVYPVSAQ 315
Query: 539 STLEAKLS 546
L AK+S
Sbjct: 316 KGLVAKVS 323
>gi|308069412|ref|YP_003871017.1| GTPase (dynamin-related) [Paenibacillus polymyxa E681]
gi|305858691|gb|ADM70479.1| Predicted GTPase (dynamin-related) [Paenibacillus polymyxa E681]
Length = 1219
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 400 EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
++ ++ D + E + C H D Y C L + +++VDTPG + + R +T
Sbjct: 762 QVDLEQYRDFVASEHKSCFVEHIDLYYDCALTR---QGIVLVDTPGADSVNARHTGVTFN 818
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVLNKSDLYQNAFELEEA 513
++ AD ++FV + T+ + FL + K+ + F++N SDL + EL
Sbjct: 819 YMKHADALVFVTYYNHAFTQGDRQFLNQLGRVKETLALDQTFFIVNASDLASSEEELHSV 878
Query: 514 ISFVKENTMKLLNIENVTIYPVSARSTLEA 543
I V+E ++ I IYP+S+ LEA
Sbjct: 879 IRHVQEQ-LQANGIRKPRIYPLSSMLALEA 907
>gi|451821189|ref|YP_007457390.1| dynamin family [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451787168|gb|AGF58136.1| dynamin family [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 593
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT-----------FLRFSDL 409
I+ +V++GE +SGKS++IN++ ++ L + V PTT +T + SD
Sbjct: 38 INPAHYVVMLGETSSGKSALINSIFDRKILVESVRPTTGVVTEVVIDEKEEESLIAISDD 97
Query: 410 ASEEQQRCER------HPDG-----QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
+ E +R P G +Y+ + + I DTPG ++++ + + +E
Sbjct: 98 LTREVIDEDRFAALTTKPIGNLMRLKYVGRSKNKKYNGIRIFDTPGYGSLIEKHEEVLKE 157
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQ-WKKKVVFVLNKSDLYQNAFELEEAISFV 517
F+P +D +++V+S + E + FL+Y + K V VL + +N E + I +
Sbjct: 158 FIPESDFIIYVVSYKTGVGEDDFQFLKYVGEIINKNVEVVLAVNMCPENTDETNKRICEI 217
Query: 518 KENTMKLLNIE 528
K+ + L+I+
Sbjct: 218 KKAVSECLHID 228
>gi|404394532|ref|ZP_10986335.1| hypothetical protein HMPREF0989_01377 [Ralstonia sp. 5_2_56FAA]
gi|348616611|gb|EGY66111.1| hypothetical protein HMPREF0989_01377 [Ralstonia sp. 5_2_56FAA]
Length = 647
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+LK+ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 196 IINFPHPMLKQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLELW 254
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE----NTMKLLNIENVTIYPVSAR 538
R +K + VLNK D + + EE + T ++L+I+ +YPVSA+
Sbjct: 255 RSHVGGGQRKGCIAVLNKVDGLWDPLKSEEEVENEVSRQIMTTAQVLDIDVERVYPVSAQ 314
Query: 539 STLEAKLS 546
L AK+S
Sbjct: 315 KGLVAKVS 322
>gi|390438026|ref|ZP_10226527.1| Genome sequencing data, contig C247 [Microcystis sp. T1-4]
gi|389838559|emb|CCI30651.1| Genome sequencing data, contig C247 [Microcystis sp. T1-4]
Length = 454
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
E++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 EDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLTTGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + ++P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWIPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L +Q KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRQAKKPIILVFNKIDLYPEA 184
>gi|297537834|ref|YP_003673603.1| hypothetical protein M301_0642 [Methylotenera versatilis 301]
gi|297257181|gb|ADI29026.1| conserved hypothetical protein [Methylotenera versatilis 301]
Length = 690
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 430 PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYT 487
P P+L+ + ++DTPG N + + LT +P A VLF+ + D +T+S++ ++ Y
Sbjct: 215 PHPLLRNGLAVIDTPGLNT-MGAEPELTLSIIPNAHAVLFLTATDTGITKSDMQIWTEYV 273
Query: 488 QQWKKKVVFVLNKSDLYQNAFELE-EAISFVK---ENTMKLLNIENVTIYPVSARSTLEA 543
Q+ + VLNK D+ + E E E + ++ +NT + L +++ I+ +SA+ L A
Sbjct: 274 QKRAAHKLVVLNKIDILWDGLESEAEVDALIQKQIQNTARELGLDSRNIFAMSAQKALVA 333
Query: 544 KLSVSSAVGK 553
K+ +A+ K
Sbjct: 334 KIRKDAALLK 343
>gi|410463142|ref|ZP_11316676.1| dynamin family protein [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409983719|gb|EKO40074.1| dynamin family protein [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 500
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLLID---AVSQIDEPFLLVIVGEYNSGKSSV 380
K+ ++ E +L+EA+ +K + + L+ + +SQI L+ I+G +++GKS+
Sbjct: 14 KEHLQLENPLLVEAVGSFRKLDKVCRGLGLIGNDQSTISQIAWWPLISILGPFSAGKSTF 73
Query: 381 INALL-------GKRYLKDG-------------VVPTTNEITFLRFSDLA-SEEQQRCER 419
IN L G + D V+P T LRF SEE ++ E
Sbjct: 74 INNYLDIPVQQTGSHAVDDKFTVICYNAAGESRVLPGTALNADLRFPFYKMSEELEKVEP 133
Query: 420 HPDGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQ--RLTEEFVPRADLVLFVISA 472
G+ Y+ PS L+ +I++D+PG + QR R+T + +DLVL + A
Sbjct: 134 GEGGRIDSYIRLKTCPSDKLRGLILIDSPGFDADAQRTSTLRITNHIMDLSDLVLVLFDA 193
Query: 473 DRPL------TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
RP T + +V ++ K +F+LN+ D+ EE +
Sbjct: 194 RRPEPGAMRDTLTHLVAATINRRDSNKFIFILNQMDIAAREDNPEEVVG 242
>gi|434388975|ref|YP_007099586.1| small GTP-binding protein domain protein [Chamaesiphon minutus PCC
6605]
gi|428019965|gb|AFY96059.1| small GTP-binding protein domain protein [Chamaesiphon minutus PCC
6605]
Length = 469
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 25/141 (17%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
+ + + G + GKS+V+NAL+ K L+ G + N +T RF + PDG
Sbjct: 66 YSIAVFGMVSRGKSAVLNALMEKNILEIGPL---NGVT--RFP-------RSIRWSPDG- 112
Query: 425 YICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
+ ++ ++DTPG + I + + ++ EE V +ADL+LF+I+ D +T+ E
Sbjct: 113 ---------IMQVDLIDTPGLDEIDGEARAKMAEEVVRQADLILFIIAGD--ITQLEYQA 161
Query: 484 LRYTQQWKKKVVFVLNKSDLY 504
L +Q K ++ V NKSDLY
Sbjct: 162 LCELRQAHKPLLLVFNKSDLY 182
>gi|75909498|ref|YP_323794.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75703223|gb|ABA22899.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 492
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 302 DTSNSFFGKERVAGFVKFEDREKQL----IETERSVLLEAIDVIKKASPLME-EVSLLID 356
DTS+ + +E + FED + +L ++ L+ ID+ + +E E++ L
Sbjct: 19 DTSSLNWEEELDSAIFSFEDIQAELNYKQAQSALRNLVGNIDLSSQEKAGLESEIADLET 78
Query: 357 AVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLAS 411
+ ++D + + G GKSS++NAL+G+ + GV + + R S+ A
Sbjct: 79 MLGKLDSMVVQIAAFGMVGRGKSSLLNALVGESVFETGPLHGVTRAAQRVNW-RISEEAI 137
Query: 412 EEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVI 470
E +R R LPS ++ ++DTPG + I + + L E+ +ADL+LFVI
Sbjct: 138 GETERALR-------VTLPSVGRSQVELIDTPGLDEIDGETRTALAEQIAKQADLILFVI 190
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
S D E E L ++ K ++ V NK D Y A
Sbjct: 191 SGDMTKIEHEA--LSQLREAGKPIILVFNKVDQYPEA 225
>gi|330840039|ref|YP_004414619.1| Dynamin family protein [Selenomonas sputigena ATCC 35185]
gi|329747803|gb|AEC01160.1| Dynamin family protein [Selenomonas sputigena ATCC 35185]
Length = 1210
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 36/179 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP--- 421
F + G +++GKS +IN LLG L +PT+ + ++R + +E + R E P
Sbjct: 41 FGVAFCGHFSAGKSRMINRLLGAMLLPSSPIPTSANLVYVRHGEEYAEARFR-EGRPRRY 99
Query: 422 --------------DGQYI---------CYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
DG I LP+ + +++DTPG + + TEE
Sbjct: 100 LAPYDYDLVKSFCRDGTAIESIEISTAAASLPAGV----VLMDTPGIDSTDAAHRLATEE 155
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
+ ADL+ +V+ + +E +F + + K+V V+N+ D ++ EE +SF
Sbjct: 156 AIHLADLIFYVMDYNHVQSEESFLFTKSLTEAGKRVALVINQIDKHR-----EEELSFA 209
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 437 MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK----- 491
+ +VDTPG + I R L+ F+ ++D +LFV + + ++ FL + K
Sbjct: 799 VTLVDTPGADSINARHTDLSFRFIRQSDAILFVTYYNHAFSHADSEFLVQLGRVKDAFEM 858
Query: 492 KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLS 546
K+ F++N DL ++ + + +++V+ N + I+ ++ VS+ + L+ KL+
Sbjct: 859 DKMFFIVNAIDLAESEEDASDVLAYVRAN-LSRFGIKRPRLHAVSSLAILKEKLA 912
>gi|153854261|ref|ZP_01995560.1| hypothetical protein DORLON_01554 [Dorea longicatena DSM 13814]
gi|149753036|gb|EDM62967.1| tRNA modification GTPase TrmE [Dorea longicatena DSM 13814]
Length = 460
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 342 KKASPLMEEVSLLIDAVSQ---IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT 398
K +ME + L+D+ I E VI+G+ N+GKSS++N LLG+ D + T
Sbjct: 198 KVVDEIMEAMKRLLDSCDDGRIIKEGVRTVILGKPNAGKSSLLNVLLGE----DRAIVT- 252
Query: 399 NEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT----NVILQRQQR 454
D+A + E H + + I + I+DT G +V+ +
Sbjct: 253 ---------DIAGTTRDVLEEHLNLKGIS---------LNIMDTAGIRDTEDVVEKIGVD 294
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+E+ +ADL+L+VI A RPL E++ L + K+ + +LNKSDL
Sbjct: 295 RAKEYADKADLILYVIDASRPLDENDAEILHLIK--GKRAIILLNKSDL 341
>gi|427738990|ref|YP_007058534.1| small GTP-binding protein domain-containing protein [Rivularia sp.
PCC 7116]
gi|427374031|gb|AFY57987.1| small GTP-binding protein domain protein [Rivularia sp. PCC 7116]
Length = 442
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 28/158 (17%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ LL ++++D + + G + GKS+V+NAL+G++ L+ G + N +T
Sbjct: 41 EIQLLTSNLNKLDYNVIRIAAFGLVSRGKSAVLNALMGQKILETGPL---NGVT------ 91
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLVL 467
+ + +P G+ E+ ++DTPG + I + + ++ E +ADL+L
Sbjct: 92 ---QYPRSIRWNPGGKV----------EVELIDTPGLDEIAGEARGQMAREVTRQADLIL 138
Query: 468 FVISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
FV+S D TE E + LR Q K ++ V NK+DLY
Sbjct: 139 FVVSGDITRTEYEALLDLRKAQ---KPLILVFNKTDLY 173
>gi|237742990|ref|ZP_04573471.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 7_1]
gi|229433550|gb|EEO43762.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 7_1]
Length = 206
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAA 155
+G D I+E++ V IV L S K YE A +K + K+ LF+I +R+DI
Sbjct: 18 SGKDFYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDITQ 77
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
AV A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 78 AVEADGVHLGQSDMPIEKAREILKDKF-------LIGATAKNIEEAKKAELL-GADYIGS 129
Query: 214 VCCFGEGQKADV----IEN--SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDL 267
FG K + IE+ + +VKIP+F + + +V G G + S+
Sbjct: 130 GAIFGTSTKDNAKKLEIEDLKKIVNSVKIPVFAIGGININNVWMLKNIGLQG-ICSVS-- 186
Query: 268 SLFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 -----GILSEKDCKKAVEN 200
>gi|86605404|ref|YP_474167.1| GTP-binding domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86553946|gb|ABC98904.1| GTP-binding domain protein [Synechococcus sp. JA-3-3Ab]
Length = 414
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 25/145 (17%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
F + + G N GKS+V+NAL G+ LK G + N +T + P Q
Sbjct: 47 FSIAVFGLVNRGKSAVLNALTGEERLKVGPL---NGVT----------------QQP--Q 85
Query: 425 YICYLPSP-ILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ + P P I + +VDTPG N V + +++L + ADL++FVI+ D LT+ E
Sbjct: 86 SLLWQPEPGIPWRVKLVDTPGLNEVEGEAREQLAWDVARSADLIVFVIATD--LTQLEYQ 143
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQNA 507
L + K ++ VLNK DLY A
Sbjct: 144 ALSELRTLYKPILLVLNKCDLYSEA 168
>gi|196230134|ref|ZP_03128997.1| hypothetical protein CfE428DRAFT_2162 [Chthoniobacter flavus
Ellin428]
gi|196225731|gb|EDY20238.1| hypothetical protein CfE428DRAFT_2162 [Chthoniobacter flavus
Ellin428]
Length = 555
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
L + + +AS + S L + + E F V +G GKS ++NAL + +
Sbjct: 17 LFSLLRLAAEASAQVSTQSALRSSQWALREGFTFVAMGPEGGGKSGLLNALFEREFTGAA 76
Query: 394 VVPTTNEITFLRFSDLASEEQQRCERHPDGQYI-CYLPSPILKEMIIVDTPGTNVILQRQ 452
T I LR+ + E+ P I C+ P L++ +++ PGT
Sbjct: 77 EPLTAGRIAVLRYGETPREQT------PAADVIECHRPHIFLRDFTLIEAPGTVPF---- 126
Query: 453 QRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
+ RADL+ FV+SA + ++ R ++ K++VF++ +SD
Sbjct: 127 -EAISPYFSRADLIFFVVSATGGVPDTWSFLARLSRDLLKRLVFIVWQSD 175
>gi|29832240|ref|NP_826874.1| hypothetical protein SAV_5697 [Streptomyces avermitilis MA-4680]
gi|29609358|dbj|BAC73409.1| hypothetical protein SAV_5697 [Streptomyces avermitilis MA-4680]
Length = 659
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 27/150 (18%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF----------SDLAS 411
+E F +++VG++N GKS+ +NALLG R L VP T IT +RF +D A
Sbjct: 59 NEAFHVMVVGDFNRGKSTFVNALLGDRVLPVKAVPATAVITEVRFGESPAALLWTADAAE 118
Query: 412 EE---------------QQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRL 455
E ER P + P + + ++++D+PG N + +
Sbjct: 119 PEAVDPDRLIELITVNNASADERSPYVKAEVVWPLELCRHNVVLIDSPGLNA-YETHDDI 177
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLR 485
T + +AD V+F+ A P++ SE FL+
Sbjct: 178 TLTHLSKADAVIFLQHAIAPMSISESTFLK 207
>gi|52080713|ref|YP_079504.1| hypothetical protein BL00674 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404489598|ref|YP_006713704.1| dynamin [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52003924|gb|AAU23866.1| conserved protein YpbR [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348589|gb|AAU41223.1| putative dynamin [Bacillus licheniformis DSM 13 = ATCC 14580]
Length = 1187
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 387 KRYLKDGVVPTTNEITFLRFSDL---ASEEQQRCERHPDGQYICYLPSPILKEMI-IVDT 442
K Y + G EI + DL +EEQ C + YL +P+ ++ I IVDT
Sbjct: 719 KAYKRYGSYINDQEILTISADDLHPYVAEEQTACAVR---EVTVYLSTPVTEKGITIVDT 775
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFV 497
PG + + +R L +++ AD +L++ ++++ FLR K K+ F+
Sbjct: 776 PGASSMNKRHTELAFQYMKDADALLYLTYYQHSFSKADRSFLRRLGLIKDAFSMDKMFFI 835
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLS 546
LN +DL ++ EL+ +V+ +K I+N +Y VS++ L K S
Sbjct: 836 LNAADLAKSPVELQTVEDYVRGELLK-EGIQNPHLYHVSSKQELNKKTS 883
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL---------------AS 411
+ + G Y++GKSS++NALL + L +PT+ + +R ++ S
Sbjct: 47 IALTGHYSAGKSSLLNALLQEEVLPTSPIPTSANLVLVRRGEMKTTLHTVDGRYAQMDGS 106
Query: 412 EEQQRCERH-PDGQYICYLP-----SPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADL 465
++++ + + DG I + S I + +++DTPG + + +AD
Sbjct: 107 YDKEKVQAYCRDGSQIEMVEIGGPFSGIAPQAVLIDTPGIDSTDDAHFLSASSILHQADA 166
Query: 466 VLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
+ +V+ + +E V FLR + + F++N+ D + A
Sbjct: 167 LFYVVHYNHVHSEENVKFLRSIKDKIPNIFFIVNQIDRHDEA 208
>gi|443478874|ref|ZP_21068567.1| GTP-binding protein HSR1-related [Pseudanabaena biceps PCC 7429]
gi|443015774|gb|ELS30594.1| GTP-binding protein HSR1-related [Pseudanabaena biceps PCC 7429]
Length = 532
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 34/195 (17%)
Query: 330 ERSVLLEAID-----VIKKASPLMEEVSLLIDA-VSQID-----EPFLLVIVGEYNSGKS 378
+RS L + ++ +IK A+P+ E +DA QI F +VI G ++GK+
Sbjct: 74 DRSFLFKELEQIQTAIIKIANPIERES---LDAQARQISSNLQKNHFRIVIFGTGSAGKT 130
Query: 379 SVINALLGKRYLKDG--VVPTTNEITF----LRFSDLASEEQQRCERHPDGQYICYLPSP 432
SV+NAL+G++ K G + TTN + + FS + H D L S
Sbjct: 131 SVLNALMGRKLGKTGAEIGTTTNRQEYAYQGIDFSPVGIN-----PIHSDRN----LESK 181
Query: 433 ILKEMIIVDTPGTNVI--LQRQQRLTEEFVPR-ADLVLFVISADRPLTESEVVFLRYTQQ 489
+ +++ ++DT GT I + +Q+ L + R ADL++FV + D LT SE L
Sbjct: 182 LKRQISLLDTSGTQEIGAMGQQRELESRQIARNADLMVFVTAGD--LTNSEYRDLEDLTG 239
Query: 490 WKKKVVFVLNKSDLY 504
K+V+ V NK+DLY
Sbjct: 240 LGKRVILVFNKTDLY 254
>gi|171060163|ref|YP_001792512.1| hypothetical protein Lcho_3493 [Leptothrix cholodnii SP-6]
gi|170777608|gb|ACB35747.1| conserved hypothetical protein [Leptothrix cholodnii SP-6]
Length = 709
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK ++++DTPG N I + LT +P A +V+FV+ AD +T+S++
Sbjct: 206 LINVPHPLLKRGLVVIDTPGLNAI-GAEPELTVGLLPSAHVVVFVLGADTGVTKSDLEIW 264
Query: 485 R---YTQQWKKKVVFVLNKSD-LYQ--NAFELEEA-ISFVKENTMKLLNIENVTIYPVSA 537
R +Q + VV LNK D LY ++ EL EA I+ K L + + ++P+SA
Sbjct: 265 RDHLASQALTRYVV--LNKIDALYDPLSSIELNEAQIARQCAQVAKTLEMPSSRVFPLSA 322
Query: 538 RSTLEAKL 545
R LEA++
Sbjct: 323 RQALEARV 330
>gi|409991478|ref|ZP_11274736.1| small GTP-binding protein [Arthrospira platensis str. Paraca]
gi|409937662|gb|EKN79068.1| small GTP-binding protein [Arthrospira platensis str. Paraca]
Length = 451
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 27/164 (16%)
Query: 347 LMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF-- 403
+ E++ L + ++D+ + + G + GKS+V+NALLG+R LK G PT +
Sbjct: 43 VQEQLDTLAVNLEKLDQGLIRIAAFGLVSRGKSAVLNALLGQRVLKTG--PTHGVTQWPR 100
Query: 404 -LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVP 461
+R++ + EE + E PI E+I DTPG + V Q + + E
Sbjct: 101 SVRWT-VRPEEIREVE-------------PIDVELI--DTPGLDEVAGQIRGEMAREVSR 144
Query: 462 RADLVLFVISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D TE E + L+ TQ K ++ V NK DLY
Sbjct: 145 QADLILFVVSGDLTRTEYEAIAELKRTQ---KPLIIVFNKIDLY 185
>gi|315123968|ref|YP_004065972.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315017690|gb|ADT65783.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419621976|ref|ZP_14155221.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 23216]
gi|380600868|gb|EIB21194.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419693908|ref|ZP_14221887.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380671760|gb|EIB86956.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|86149051|ref|ZP_01067283.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840409|gb|EAQ57666.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni CF93-6]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|86152412|ref|ZP_01070621.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|419641865|ref|ZP_14173712.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 23357]
gi|419652080|ref|ZP_14183164.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 2008-894]
gi|85840636|gb|EAQ57889.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|380614916|gb|EIB34218.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 23357]
gi|380630332|gb|EIB48571.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 2008-894]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|410726444|ref|ZP_11364682.1| dynamin family protein [Clostridium sp. Maddingley MBC34-26]
gi|410600689|gb|EKQ55215.1| dynamin family protein [Clostridium sp. Maddingley MBC34-26]
Length = 602
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 28/151 (18%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL---------------- 404
I+ +V++GE +SGKS++IN++ K+ L + V PTT +T +
Sbjct: 39 INPAHYVVMLGETSSGKSALINSIFNKKILTESVKPTTGVVTEVIIGNNYEETLVAINND 98
Query: 405 ---------RFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRL 455
+F+DL + R +YI + M + DTPG ++ R + +
Sbjct: 99 FSMEILNSGKFADLTLKPSVNLNRL---RYIGPCKDSKYEGMRLFDTPGYGSLIDRHEEV 155
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRY 486
+EF+P +D +++V+S + + + FL++
Sbjct: 156 LKEFIPESDFIVYVVSYRSGIGDDDFQFLKF 186
>gi|402815329|ref|ZP_10864922.1| hypothetical protein PAV_3c06730 [Paenibacillus alvei DSM 29]
gi|402507700|gb|EJW18222.1| hypothetical protein PAV_3c06730 [Paenibacillus alvei DSM 29]
Length = 1001
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 437 MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK----- 491
+ VDTPG + I R + E++ +AD++LFV + ++++ FL + K
Sbjct: 878 FVFVDTPGADSINARHTGVAFEYMKQADIILFVTYYNHAFSQADRQFLTQLGRVKDAFEL 937
Query: 492 KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSS 549
K+ FV+N SDL + EL + +V E+ ++ + N ++P+S+ LE K S
Sbjct: 938 DKMFFVVNASDLAASPEELSSVLDYV-EDRLREFGVRNPRLFPISSLQALEGKQQAQS 994
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC-ERHPDG- 423
++ G +++GKSSVINAL GK+ L +PT+ + LR+ E R R DG
Sbjct: 58 MVTFCGHFSAGKSSVINALCGKQLLPSSPIPTSANVVTLRY----GERHARVLRRLGDGS 113
Query: 424 ------QY-----ICY----LPSPILKEMI--------IVDTPGTNVILQRQQRLTEEFV 460
Q+ IC + +L + I ++DTPG + + TEE +
Sbjct: 114 VQEEPVQFEQLDEICRDGIGIERVVLFDEIEWMEQGVALLDTPGVDSTDAAHRAATEEAM 173
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
AD+V +V + +E+ F + K +++++N+ D ++
Sbjct: 174 HLADIVFYVTDYNHVQSETNFAFAKEVADAGKPLIWIVNQIDKHR 218
>gi|157414707|ref|YP_001481963.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 81116]
gi|384441064|ref|YP_005657367.1| ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni M1]
gi|415744547|ref|ZP_11474576.1| GTP binding protein [Campylobacter jejuni subsp. jejuni 327]
gi|157385671|gb|ABV51986.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 81116]
gi|307747347|gb|ADN90617.1| Probable ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni M1]
gi|315932653|gb|EFV11583.1| GTP binding protein [Campylobacter jejuni subsp. jejuni 327]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|407941859|ref|YP_006857499.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni PT14]
gi|419631382|ref|ZP_14163971.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|419649792|ref|ZP_14181026.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419656725|ref|ZP_14187501.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 2008-988]
gi|419676755|ref|ZP_14205920.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 87330]
gi|380610845|gb|EIB30417.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380629466|gb|EIB47728.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380634102|gb|EIB52006.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380655728|gb|EIB72031.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 87330]
gi|407905697|gb|AFU42526.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni PT14]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|319645327|ref|ZP_07999560.1| YpbR protein [Bacillus sp. BT1B_CT2]
gi|317393136|gb|EFV73930.1| YpbR protein [Bacillus sp. BT1B_CT2]
Length = 1187
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 387 KRYLKDGVVPTTNEITFLRFSDL---ASEEQQRCERHPDGQYICYLPSPILKEMI-IVDT 442
K Y + G EI + DL +EEQ C + YL +P+ ++ I IVDT
Sbjct: 719 KAYKRYGSYINDQEILTISADDLHPYVAEEQTACAVR---EVTVYLSTPVTEKGITIVDT 775
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFV 497
PG + + +R L +++ AD +L++ ++++ FLR K K+ F+
Sbjct: 776 PGASSMNKRHTELAFQYMKDADALLYLTYYQHSFSKADRSFLRKLGLIKDAFSMDKMFFI 835
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLS 546
LN +DL ++ EL+ +V+ +K I+N +Y VS++ L K S
Sbjct: 836 LNAADLAKSPVELQTVEDYVRGELLK-EGIQNPHLYHVSSKQELNKKTS 883
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL---------------AS 411
+ + G Y++GKSS++NALL + L +PT+ + +R ++ S
Sbjct: 47 IALTGHYSAGKSSLLNALLQEEVLPTSPIPTSANLVLVRRGEMKTTLHTVDGRYAQMDGS 106
Query: 412 EEQQRCERH-PDGQYICYLP-----SPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADL 465
++++ + + DG I + S I + +++DTPG + + +AD
Sbjct: 107 YDKEKVQAYCRDGSQIEMVEIGGPFSGIAPQAVLIDTPGIDSTDDAHFLSASSILHQADA 166
Query: 466 VLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
+ +V+ + +E V FLR + + F++N+ D + A
Sbjct: 167 LFYVVHYNHVHSEENVKFLRSIKDKIPNIFFIVNQIDRHDEA 208
>gi|283955835|ref|ZP_06373326.1| LOW QUALITY PROTEIN: putative ATP/GTP binding protein
[Campylobacter jejuni subsp. jejuni 1336]
gi|283792790|gb|EFC31568.1| LOW QUALITY PROTEIN: putative ATP/GTP binding protein
[Campylobacter jejuni subsp. jejuni 1336]
Length = 609
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +LG L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|300869362|ref|ZP_07113952.1| small GTP-binding protein [Oscillatoria sp. PCC 6506]
gi|300332661|emb|CBN59150.1| small GTP-binding protein [Oscillatoria sp. PCC 6506]
Length = 492
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 18/154 (11%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPT---TNEITFLRFSDLASEEQ------QRC 417
+ + G GKSSV+NALLG+ + G PT T +T + D+ EE +
Sbjct: 68 IAVFGMVGRGKSSVLNALLGQNIFETG--PTHGVTRSMTIGEW-DIGQEEMGSRRDGEYG 124
Query: 418 ERHPDGQYICYLPSPI---LKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISAD 473
+ GQ+ +PI L ++ ++DTPG + V + ++ L + +ADL+LFV++ D
Sbjct: 125 KLETQGQFPVLSNAPIIYRLSQVELIDTPGIDEVDGETREALARQVAKQADLILFVVAGD 184
Query: 474 RPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
+T+ E L ++ K ++ V NK D Y +A
Sbjct: 185 --ITKVEYEALSQLREAGKPMLLVFNKIDQYPDA 216
>gi|402834923|ref|ZP_10883510.1| 50S ribosome-binding GTPase [Selenomonas sp. CM52]
gi|402276622|gb|EJU25727.1| 50S ribosome-binding GTPase [Selenomonas sp. CM52]
Length = 1210
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCER----- 419
F + G +++GKS +IN LLG L +PT+ + ++R + +E + R R
Sbjct: 41 FGVAFCGHFSAGKSRMINRLLGAMLLPSSPIPTSANLVYVRHGEEYAEARFRDGRPRRYL 100
Query: 420 -----------HPDGQYI---------CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
DG I LP+ + +++DTPG + + TEE
Sbjct: 101 APYDYDLVKSFCRDGTAIESIEISTAAASLPAGV----VLMDTPGIDSTDAAHRLATEEA 156
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
+ ADL+ +V+ + +E +F + + K+V V+N+ D ++ EE +SF
Sbjct: 157 IHLADLIFYVMDYNHVQSEESFLFTKSLTEAGKRVALVINQIDKHR-----EEELSFA 209
Score = 46.6 bits (109), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 377 KSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC-----ERHPDGQYICYLPS 431
+ + + A R + +G + T FS A +E + C E + D C L
Sbjct: 741 QQAFLRAYEKGRAMFEGKAGAWLDCTLEDFSAYAVDEDKACFVEEIEIYSD----CDLTR 796
Query: 432 PILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK 491
+ + +VDTPG + I R L+ F+ ++D +LFV + + ++ FL + K
Sbjct: 797 ---RGVTLVDTPGADSINARHTDLSFRFIRQSDAILFVTYYNHAFSHADSEFLVQLGRVK 853
Query: 492 -----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLS 546
K+ F++N DL ++ + + +++V+ N + I+ ++ VS+ + L+ KL+
Sbjct: 854 DAFEMDKMFFIVNAIDLAESEEDASDVLAYVRAN-LSRFGIKRPRLHAVSSLAILKEKLA 912
>gi|423682679|ref|ZP_17657518.1| hypothetical protein MUY_02531 [Bacillus licheniformis WX-02]
gi|383439453|gb|EID47228.1| hypothetical protein MUY_02531 [Bacillus licheniformis WX-02]
Length = 1186
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 387 KRYLKDGVVPTTNEITFLRFSDL---ASEEQQRCERHPDGQYICYLPSPILKEMI-IVDT 442
K Y + G EI + DL +EEQ C + YL +P+ ++ I IVDT
Sbjct: 718 KAYERYGSYINDQEILTISADDLHPYVAEEQTACAVR---EVTVYLSTPVTEKGITIVDT 774
Query: 443 PGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFV 497
PG + + +R L +++ AD +L++ ++++ FLR K K+ F+
Sbjct: 775 PGASSMNKRHTELAFQYMKDADALLYLTYYQHSFSKADRSFLRKLGLIKDAFSMDKMFFI 834
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLS 546
LN +DL ++ EL+ +V+ +K I+N +Y VS++ L K S
Sbjct: 835 LNAADLAKSPVELQTVEDYVRGELLK-EGIQNPHLYHVSSKQELNKKTS 882
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDL---------------AS 411
+ + G Y++GKSS++NALL + L +PT+ + +R ++ S
Sbjct: 47 IALTGHYSAGKSSLLNALLQEDVLPTSPIPTSANLVLVRRGEMKTTLHTVDGRYAQMDGS 106
Query: 412 EEQQRCERH-PDGQY-ICYLPSP---ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLV 466
++++ + + DGQ + + P I + +++DTPG + + +AD +
Sbjct: 107 YDKEKVQAYCRDGQIEMVEIGGPFSGIAPQAVLIDTPGIDSTDDAHFLSASSILHQADAL 166
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
+V+ + +E V FLR + + F++N+ D + A
Sbjct: 167 FYVVHYNHVHSEENVKFLRSIKDKIPNIFFIVNQIDRHDEA 207
>gi|254303531|ref|ZP_04970889.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323723|gb|EDK88973.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 206
Score = 57.4 bits (137), Expect = 4e-05, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 100 DALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAAVN 158
D I+E++ V IV L S K YE A +K + K+ LF+I +R+DIA AV
Sbjct: 21 DLYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDIAQAVK 80
Query: 159 ASGVLLSDQGLPAIVARNTMKD---------SMSESVVLPLVGRNVQTLDAAFNASSSEG 209
A GV L +P AR +KD ++ E+ + L+G + A F S+ +
Sbjct: 81 ADGVHLGQSDIPIEKAREILKDKFLIGATARNIEEAKKVELLGADYIGSGAIFGTSTKDN 140
Query: 210 ADFLVCCFGEGQKADVIE-NSLFTNVKIPIFIMNASPLVDVSKFLKSGASG 259
A +K ++ E + T+VKIP+F + + +VS G G
Sbjct: 141 A----------KKLEMEELKKIVTSVKIPVFAIGGININNVSLLKNIGLQG 181
>gi|95930335|ref|ZP_01313072.1| thiamine-phosphate pyrophosphorylase [Desulfuromonas acetoxidans
DSM 684]
gi|95133587|gb|EAT15249.1| thiamine-phosphate pyrophosphorylase [Desulfuromonas acetoxidans
DSM 684]
Length = 203
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKD-RALFLIAERVDIAA 155
G D L++I+ A++ V V L + S + ++ C L+ + + +A LI +R+DIA
Sbjct: 17 GGRDLLEVIEAALSGGVQAVQLREKDLSTRELFTMGCALRKLTQRYQATLLINDRIDIAL 76
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV- 214
AV+A GV L++Q L VAR + L+G + +D A A +GADF+
Sbjct: 77 AVDADGVHLTEQSLEVEVARRLLGPD-------KLIGVSTHHVDRAV-AVEQQGADFITF 128
Query: 215 ---------CCFGEGQKADVIENSLFTNVKIPIFIMNASPLVDVSKFLKSGASG 259
+G Q D + N L V +P+ + L +GASG
Sbjct: 129 SPIYATPSKAAYGAPQGLDKLRN-LCRQVSLPVIALGGINAQRRQAVLAAGASG 181
>gi|422932880|ref|ZP_16965805.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339891992|gb|EGQ80898.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 206
Score = 57.0 bits (136), Expect = 4e-05, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 23/191 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+E++ V IV L S K YE A +K + K+ LF+I +R+DIA A
Sbjct: 19 GKDFYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNAS------SSEGA 210
+ A GV L +P AR+ +KD L+G + ++ A A GA
Sbjct: 79 IEADGVHLGQSDMPIEKARDILKDKF-------LIGATARNIEEAKKAELLGADYIGSGA 131
Query: 211 DFLVCCFGEGQKADVIE-NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLSL 269
F +K ++ E + +VKIP+F + + +V G G V S+
Sbjct: 132 IFGTSTKDNAKKLEMTELKKIVNSVKIPVFAIGGININNVWMLKNIGLQG-VCSVS---- 186
Query: 270 FNDGVLSQMFC 280
G+LS+ C
Sbjct: 187 ---GILSEKDC 194
>gi|291568398|dbj|BAI90670.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 451
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 27/166 (16%)
Query: 345 SPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF 403
+ + E++ L + ++D+ + + G + GKS+V+NALLG+R LK G PT +
Sbjct: 41 ATVQEQLDTLAVNLEKLDQGLIRIAAFGLVSRGKSAVLNALLGQRVLKTG--PTHGVTQW 98
Query: 404 ---LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEF 459
+R++ + EE + E PI E+I DTPG + V Q + + E
Sbjct: 99 PRSVRWT-VRPEEIREVE-------------PIDVELI--DTPGLDEVAGQIRGEMAREV 142
Query: 460 VPRADLVLFVISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D TE E + L+ TQ K ++ V NK DLY
Sbjct: 143 SRQADLILFVVSGDLTRTEYEAIAELKRTQ---KPLIIVFNKIDLY 185
>gi|288556141|ref|YP_003428076.1| GTP1/OBG family GTPase [Bacillus pseudofirmus OF4]
gi|288547301|gb|ADC51184.1| GTP1/OBG family GTPase [Bacillus pseudofirmus OF4]
Length = 1188
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 24/187 (12%)
Query: 422 DGQYIC-------YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISAD 473
D +Y C Y P+ KE +++VDTPG N I R + + +D + +V +
Sbjct: 748 DEKYACLIHHVTIYYDCPLTKEGIVLVDTPGVNSIHGRHTNVAFTQLRESDAIFYVTYYN 807
Query: 474 RPLTESEVVFLRYTQQWK-------KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLN 526
++S+ FL TQ K K+ F+LN +DL + EL + + + +
Sbjct: 808 HAFSKSDQHFL--TQMAKVNDRFSTDKLYFILNAADLASSPAELNGVRKHIHDQLVN-IG 864
Query: 527 IENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVN-DSHWRINTFDKLEKLLYSFLDGSS 585
I+ +YP+S++ LEAK S SS H E+ ++ + T +L++L YS + +
Sbjct: 865 IDQPRLYPLSSKKGLEAKRSTSS-----HDEMFERFENAFYTETIQELKQLSYSLIQEET 919
Query: 586 STGKERM 592
T E++
Sbjct: 920 RTYTEQL 926
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 338 IDVIKK--ASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV 395
+DV ++ P ++ +++ D ++DE F + G +++GKS+++N LLG L +
Sbjct: 3 VDVSQRVLTEPEIQRQAMIKD--KEVDERFEVAFCGHFSAGKSTILNQLLGAEVLPTSPI 60
Query: 396 PTTNEITFLRFSDLA--SEEQQRCERHPDGQ------------------YICYLPSPILK 435
PT+ I ++ +L E E+ G+ + P P +
Sbjct: 61 PTSANIIGIKNGELGLLVERMDDTEKEWTGEIPWESVREWGMNGSDIRHMTIFAPLPFMH 120
Query: 436 -EMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKV 494
+ ++ DTPG + Q +T E + DL+++V+ + +E+ + FL+ K +
Sbjct: 121 PQSVVYDTPGVDSTDPTHQAVTMEALYTTDLIVYVMDYNHIQSETNLYFLKQLTDENKPL 180
Query: 495 VFVLNKSD 502
V+N+ D
Sbjct: 181 YIVINQVD 188
>gi|398810401|ref|ZP_10569220.1| dynamin family protein [Variovorax sp. CF313]
gi|398083033|gb|EJL73765.1| dynamin family protein [Variovorax sp. CF313]
Length = 653
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
A + Q R E + +P P+L++ ++I+DTPG N I + LT +P+A V+F
Sbjct: 180 AQDAQGRVEIPRWRHAVLNMPHPLLEQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVF 238
Query: 469 VISADRPLTESEVVFLR---YTQQWKKKVVFV-LNKSDLYQNAF----ELEEAISFVKEN 520
++ A+ +T S++ R T+ FV LNK D + +E+ I +E
Sbjct: 239 ILGAETGVTRSDLSIWREHLITEDEGNDTRFVVLNKIDTMWDTLSQPAHIEQQIERQREG 298
Query: 521 TMKLLNIENVTIYPVSARSTLEAKL 545
+LL + + PVSA+ L+AK+
Sbjct: 299 AARLLEVPLAQVLPVSAQKGLQAKI 323
>gi|317484557|ref|ZP_07943464.1| dynamin family protein [Bilophila wadsworthia 3_1_6]
gi|316924183|gb|EFV45362.1| dynamin family protein [Bilophila wadsworthia 3_1_6]
Length = 862
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 158/402 (39%), Gaps = 97/402 (24%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKR--------------------YLKDGVVPTTNEIT 402
+PF +VIVGE GKSS+INA++G+ + D V +
Sbjct: 216 QPFKIVIVGERKRGKSSLINAIIGQELSPVRESTPETATVVEFKYAHAPDYSVRFLDSSQ 275
Query: 403 FLRFSDLASEEQQ-----RCERH-----PDGQYI---------CY--------------- 428
F R D EQ R H DG +I C+
Sbjct: 276 FARLEDYLENEQDNLLLTRKIEHIRKGVSDGTFIPGKLLSGITCWDDLSDYISLEGRFSG 335
Query: 429 --------LPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTES 479
LP L+ +++VDTPG N Q L+ E AD V+FV+ A P + S
Sbjct: 336 FVARVSVGLPLDTLRAGVVLVDTPGLNDTDQFHDYLSYEESLEADCVIFVMDARDPGSNS 395
Query: 480 EVVFLRYTQQWKKKV--VFVLNKSDLYQNAFEL----EEAISFVKENTMKLLNIENVTIY 533
E+ LR + + V + VL D +A L E+A + ++E ++E +
Sbjct: 396 ELSLLRKLARSGRTVSIIGVLTNIDRLNSAASLEVAREQARTVLREACRSSGHVELAGVV 455
Query: 534 PVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMR 593
++ R +E + SA + S++S + S ++L LL +D GKE R
Sbjct: 456 ALNTRQAVEERCRGGSAFSETLSKVSRSVSG--CGELEQLLALLREIMD--RDAGKEAYR 511
Query: 594 LKL-ETPIRIA----ERL----------LSSCETLVMKDCQDAKQDLTLANEMIDSLKEY 638
K+ E RIA ERL L + E L M D AKQ L+ + SL++
Sbjct: 512 HKIAEAYSRIADSARERLRQHVQEYRESLPNPELLGMLDAH-AKQ---LSASALSSLEQA 567
Query: 639 VMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIV 680
+ + + K L D + + +K TL + +D V
Sbjct: 568 RQVVNAAA-----KDLDAWDESTEKALKKFHETLVLRLMDAV 604
>gi|443325712|ref|ZP_21054394.1| small GTP-binding protein domain protein [Xenococcus sp. PCC 7305]
gi|442794682|gb|ELS04087.1| small GTP-binding protein domain protein [Xenococcus sp. PCC 7305]
Length = 482
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 371 GEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
G GKSSV+NAL+G+ GV T +E+ + FS E Q E+ Q +
Sbjct: 74 GMVGRGKSSVLNALIGQDIFATGALHGVTRTVDEVKW-DFSQTTVREDQELEQTKQLQRL 132
Query: 427 CYLPSPILKEMI-IVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P K I ++DTPG + V Q ++ L + + DL+LFV+S D +T+ E L
Sbjct: 133 T-ISNPRSKSKIQLLDTPGIDEVNGQEREILARDLATKVDLILFVVSGD--MTQVEYNAL 189
Query: 485 RYTQQWKKKVVFVLNKSDLYQNAFEL 510
++ K ++ V NK D Y A L
Sbjct: 190 SQLREAGKPMLLVFNKIDQYPEADRL 215
>gi|427712520|ref|YP_007061144.1| small GTP-binding protein domain-containing protein [Synechococcus
sp. PCC 6312]
gi|427376649|gb|AFY60601.1| small GTP-binding protein domain protein [Synechococcus sp. PCC
6312]
Length = 479
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 20/181 (11%)
Query: 334 LLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLK 391
LLE +D+ ++A+ L E ++ L + ++++ E + + + G GKSS++NALLG+
Sbjct: 43 LLERLDLAPQEAAALAETLNSLEEMLTKLQEGVVHIAVFGLVGRGKSSLLNALLGQDCFA 102
Query: 392 ----DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN- 446
GV T++ + + AS G LP + ++DTPG +
Sbjct: 103 TGPIHGVTQTSSRAVWATSAGGAS-----------GSSRVVLPGLGQSRVELIDTPGLDE 151
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
V + +Q L + +ADL+LFVIS D +T+ E L +Q K ++ V NK D Y
Sbjct: 152 VGGEARQALAQGVAQQADLILFVISGD--MTKLEHQALWELRQASKPILLVFNKVDQYPE 209
Query: 507 A 507
A
Sbjct: 210 A 210
>gi|342181884|emb|CCC91363.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 580
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL-RFSDLASEEQQRCERHPD-- 422
+++++G +++GKS++IN LLG + GV PT + T + R S+ +E+ P
Sbjct: 135 MVIVLGNHSAGKSTMINRLLGLDLQRSGVSPTDDGFTVIQRGSEDITEDGPTAVSDPRYG 194
Query: 423 -------GQYIC--------YLPSPIL--KEMIIVDTPGT---------NVILQRQQR-- 454
G Y LPS L + ++IVDTPG ++ Q R
Sbjct: 195 FQDLRRFGIYFVNKFKVKTRKLPSTSLFPEGLMIVDTPGMIDTPIHLNDRTSVEGQLRGY 254
Query: 455 ----LTEEFVPRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQNAF 508
+T F R+DL++ + P T E V + + K++ VLNKSD+Y A
Sbjct: 255 DLFAVTRWFAARSDLIILMFDPANPGTTGETLDVLTKSLAGVEHKLLIVLNKSDVYSKAA 314
Query: 509 ELEEAISFVKENTMKLLNIENV 530
+ + N K+L ++++
Sbjct: 315 DFARVYGVLCWNLSKVLQMKDI 336
>gi|54023368|ref|YP_117610.1| hypothetical protein nfa14010 [Nocardia farcinica IFM 10152]
gi|54014876|dbj|BAD56246.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 596
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 40/205 (19%)
Query: 359 SQIDEPFL-LVIVGEYNSGKSSVINALLGKRY------------LKDGVVPTTNEITFLR 405
++I +P + LV+VG+ +G S+++N+L+G + ++ G PT T ++
Sbjct: 49 ARISDPRVRLVVVGDPKNGMSTLVNSLVGAQVSATDAERSAPVIVEYGPEPTA---TLVK 105
Query: 406 FSDLASEEQQRCERHPDGQYICYL---------PSPILKE-MIIVDTPGTNVILQRQQRL 455
+ E+Q +R + PS +L + ++++D PG +R+
Sbjct: 106 AAGPGRTERQPVDRLSSRPALTAADVVRAEFTEPSALLADGIVLMDAPGGG-----DERV 160
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
T + AD VL+V A L+ +++ +L+ QQ+ V+ VLNK DLY S
Sbjct: 161 TWSMIAAADAVLYVTEASSELSPAQLDYLQRVQQFCPTVICVLNKIDLYPQ-------WS 213
Query: 516 FVKENTMKLLNIENV--TIYPVSAR 538
V++ LL+ + + PVSAR
Sbjct: 214 HVQQRDRDLLDAAGLGFAVAPVSAR 238
>gi|399049314|ref|ZP_10740363.1| dynamin family protein [Brevibacillus sp. CF112]
gi|398052992|gb|EJL45220.1| dynamin family protein [Brevibacillus sp. CF112]
Length = 655
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRA 463
F ++E++ C +YI + P+ + +++VDTPG + I R + E++ A
Sbjct: 177 FKSFVAKEEKAC----FAEYIELFYSCPLTDQGIVLVDTPGADSINARHTGVAFEYMKNA 232
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D VLFV + ++++ FL + K K+ F++N +DL + EL+ I+ V+
Sbjct: 233 DAVLFVTYYNHAFSQADREFLLQMGRVKDTFEMDKMFFIVNAADLAASEEELQGVIAHVE 292
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKL 545
+N + I IYPVS+++ L A++
Sbjct: 293 KNLLT-CGIRLPRIYPVSSQTALLARM 318
>gi|17228399|ref|NP_484947.1| hypothetical protein alr0904 [Nostoc sp. PCC 7120]
gi|17130250|dbj|BAB72861.1| alr0904 [Nostoc sp. PCC 7120]
Length = 448
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 26/157 (16%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ +L ++++D + + G + GKS+V+NALLG + L+ G + N +T
Sbjct: 45 EIEVLNSTLNKLDSNVIRIAAFGLVSRGKSAVLNALLGSKILQTGPL---NGVT------ 95
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLVL 467
+ + P G+ I L +DTPG + I + + ++ + V +ADL+L
Sbjct: 96 ---QWPRSVRWQPGGKVIVEL----------IDTPGLDEIQGESRAQMARDVVRQADLIL 142
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
FV+S D +T +E L +Q +K ++ V NK DLY
Sbjct: 143 FVVSGD--ITRTEYQALLELRQAQKPLILVFNKIDLY 177
>gi|381157684|ref|ZP_09866918.1| putative GTPase [Thiorhodovibrio sp. 970]
gi|380881547|gb|EIC23637.1| putative GTPase [Thiorhodovibrio sp. 970]
Length = 475
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE-EQQR 416
V ++ P ++++G ++SGKS+ +N LLG GV PT + T + A+E +
Sbjct: 31 VGELRRPAQVLLLGNHSSGKSTFVNHLLGDNVQNTGVAPTDDGFTIITHGATATERDGPA 90
Query: 417 CERHPDGQY--ICYL-------------PSPILKEMIIVDTPGTNVILQRQQ-------R 454
+PD Y + Y P+ +L+ + ++D+PG + +
Sbjct: 91 VVSNPDLPYEGLRYFGDQLVSHVRLKLRPAELLQRVTLIDSPGMIDEAKAENGRGFDFPG 150
Query: 455 LTEEFVPRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQNAFELEE 512
+ F RADLV+ D+P T E VF K++ +LNK D +Q+ +
Sbjct: 151 VVRWFAERADLVMVFFDPDKPGTTGETLQVFRESLAGIDHKMLIILNKVDQFQSLHDFAR 210
Query: 513 AISFVKENTMKLL 525
A + N K++
Sbjct: 211 AYGALCWNLGKVI 223
>gi|209526412|ref|ZP_03274940.1| small GTP-binding protein [Arthrospira maxima CS-328]
gi|376002018|ref|ZP_09779868.1| putative GTPase [Arthrospira sp. PCC 8005]
gi|423062068|ref|ZP_17050858.1| small GTP-binding protein [Arthrospira platensis C1]
gi|209493185|gb|EDZ93512.1| small GTP-binding protein [Arthrospira maxima CS-328]
gi|375329576|emb|CCE15621.1| putative GTPase [Arthrospira sp. PCC 8005]
gi|406716641|gb|EKD11790.1| small GTP-binding protein [Arthrospira platensis C1]
Length = 451
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 27/164 (16%)
Query: 347 LMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF-- 403
+ E++ L + ++D+ + + G + GKS+V+NALLG+R L+ G PT +
Sbjct: 43 VQEQLDTLAANLEKLDQGLIRIAAFGLVSRGKSAVLNALLGQRVLQTG--PTHGVTQWPR 100
Query: 404 -LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVP 461
+R++ + EE + E PI E+I DTPG + V Q + + E
Sbjct: 101 SVRWT-VRPEEIREVE-------------PIDVELI--DTPGLDEVAGQIRGEMAREVSR 144
Query: 462 RADLVLFVISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D TE E + L+ TQ K ++ V NK DLY
Sbjct: 145 QADLILFVVSGDLTRTEYEAIAELKRTQ---KPLIIVFNKIDLY 185
>gi|448665289|ref|ZP_21684564.1| thiamine-phosphate pyrophosphorylase [Haloarcula amylolytica JCM
13557]
gi|445772970|gb|EMA24004.1| thiamine-phosphate pyrophosphorylase [Haloarcula amylolytica JCM
13557]
Length = 211
Score = 56.6 bits (135), Expect = 6e-05, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG D++ +A+ VG+V L + + + YE L+ + ++ + F++ +RVDIA
Sbjct: 16 AGQTTADIVADAIDGGVGVVQLREKDRTARERYELGRELRELTREAGVAFVVNDRVDIAQ 75
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV- 214
A++A GV L D LP VAR + D L+GR+V T+ A A+++ V
Sbjct: 76 ALDADGVHLGDDDLPVPVARELLGDD-------ALIGRSVSTVADAEAAAAAGADYLGVG 128
Query: 215 CCFGEGQKADVIEN----------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISL 264
F G K D+ ++ ++ V IP + + ++ +++GA G +
Sbjct: 129 AVFATGSKDDIADDEYAIGTDRVAAIAEAVDIPFVGIGGVTAENATEVVEAGADGVAVIT 188
Query: 265 E 265
E
Sbjct: 189 E 189
>gi|254414201|ref|ZP_05027968.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196178876|gb|EDX73873.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 692
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------------------ 406
F L+++G+ GKS+ +NAL+G+ L V P T +T LR+
Sbjct: 70 FRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTALLTVLRYGTEKKVTVHFNDGTPPED 129
Query: 407 --------------SDLASEEQQRCERHPDGQY-ICYLPSPILKEMI-IVDTPGTNVILQ 450
++ EQQ+ + P+ Y + P P+L++ I IVD+PG N
Sbjct: 130 IDFKSFKRRYTIDPAEAKQLEQQKKQAFPNVDYAVVEYPLPLLQKGIEIVDSPGLNDTEA 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSD 502
R + L+ ++ +LFV+ A +P T +E +L Y + V F++N D
Sbjct: 190 RNE-LSLGYINNCHAILFVLRATQPCTLAERRYLENYIKDRGLSVFFLINAWD 241
>gi|448611846|ref|ZP_21662276.1| thiamine-phosphate pyrophosphorylase [Haloferax mucosum ATCC
BAA-1512]
gi|445742607|gb|ELZ94101.1| thiamine-phosphate pyrophosphorylase [Haloferax mucosum ATCC
BAA-1512]
Length = 210
Score = 56.6 bits (135), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAA 156
G D++ AV V +V L AS + YE ++ V D + F++ +RVDIA A
Sbjct: 14 GRTTTDVVRAAVRGGVDMVQLREKHASARERYEIGREIREVTADAGVSFVVNDRVDIARA 73
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
++A GV L D +P VAR + +VGR+V T+ A NA+ GAD+L
Sbjct: 74 IDADGVHLGDDDVPVSVAREQLGPD-------AIVGRSVSTVAGA-NAAEDAGADYL 122
>gi|423555562|ref|ZP_17531865.1| hypothetical protein II3_00767 [Bacillus cereus MC67]
gi|401196966|gb|EJR03904.1| hypothetical protein II3_00767 [Bacillus cereus MC67]
Length = 1219
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EITF 403
E++ L +A++QID+ ++ SGK + L R ++ G N ++T
Sbjct: 697 EIATLEEALTQIDK----IMKYPSPSGKQKTTFSFL--RAVQKGYEAVANHFGEQVQVTL 750
Query: 404 LRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
FSD + E++ C H + Y C L + + +VDTPG + I R + +++
Sbjct: 751 EEFSDYVANEEKSCFVEHMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYIKN 807
Query: 463 ADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFV 517
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE ++
Sbjct: 808 ADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEEELEMVKGYI 867
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
+ ++ I N ++ +S+ LE K
Sbjct: 868 ADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|422304509|ref|ZP_16391853.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9806]
gi|389790338|emb|CCI13779.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9806]
Length = 454
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLTTGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + ++P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWIPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L +Q KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRQAKKPIILVFNKIDLYPEA 184
>gi|340357633|ref|ZP_08680246.1| hypothetical protein HMPREF9372_3197 [Sporosarcina newyorkensis
2681]
gi|339617209|gb|EGQ21837.1| hypothetical protein HMPREF9372_3197 [Sporosarcina newyorkensis
2681]
Length = 338
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 32/168 (19%)
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVP-TTNEITFLRFSDLASEEQ 414
D Q+ + L+ ++G+ N+GKSS +N L+ K + G P T E+ + D
Sbjct: 28 DINEQLKKEILIAMIGDVNAGKSSTLNRLMQKSVAEVGAQPGETKEVKKYYYRD------ 81
Query: 415 QRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI-SAD 473
++ VDTPG + I Q + T +F AD++LF + +A
Sbjct: 82 ---------------------NILFVDTPGLDDIYQEHSQETLKFYNEADVILFFLNAAG 120
Query: 474 RPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENT 521
L+++E+ L + KKV+ VLNK D A ++ ++++ E+T
Sbjct: 121 TVLSDTELKSLNKIATFNKKVIIVLNKIDA---ADDIPSLVNYILEHT 165
>gi|152982382|ref|YP_001354813.1| hypothetical protein mma_3123 [Janthinobacterium sp. Marseille]
gi|151282459|gb|ABR90869.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 646
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+L++ ++IVDTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 195 IVNFPHPLLQQGLVIVDTPGLNAI-GTEPELTLNLIPNAHAVLFILAADTGVTKSDIDI- 252
Query: 485 RYTQQWKKKV-------VFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIY 533
W+ + + VLNK D + E+E+ I N + L + ++
Sbjct: 253 -----WRNHIGGTGAGRMVVLNKIDSMWDELRSPAEVEQQIRMQVANVAQTLELSERQVF 307
Query: 534 PVSARSTLEAKLS 546
PVSA+ L K++
Sbjct: 308 PVSAQKGLVGKIN 320
>gi|407715342|ref|YP_006836622.1| GTPase-like protein [Cycloclasticus sp. P1]
gi|407255678|gb|AFT66119.1| GTPase-like protein [Cycloclasticus sp. P1]
Length = 643
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 426 ICYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P PIL K + ++DTPG N L + LT +P A ++FV++AD +T+S++
Sbjct: 185 LVSFPHPILEKGLTVLDTPGLNA-LGSEPELTLSMLPNAQAMIFVLAADTGVTQSDMAMW 243
Query: 485 R-YTQQWKKK----VVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPV 535
+ Y Q + K + VLNK D + E ++I T LLN+E I+P+
Sbjct: 244 KQYVQGYSNKHPHSLAVVLNKIDTLSDELMSDDEWTQSIHKQTLETAGLLNLEEQVIFPL 303
Query: 536 SARSTL 541
SA+ L
Sbjct: 304 SAKQGL 309
>gi|54027385|ref|YP_121627.1| hypothetical protein nfa54110 [Nocardia farcinica IFM 10152]
gi|54018893|dbj|BAD60263.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 636
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 44/259 (16%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL 390
SVL E I + +A+ + V L A +++ +P +V+ G GKS ++NAL+
Sbjct: 14 SVLGETI-AVARAAGRTDLVGRLEAAAARVRDPRRRIVVAGLLGQGKSRLVNALMNAEIC 72
Query: 391 KDGVVPTTNEITFLRFSDLASEE-----------QQRC-----------ERHP--DGQYI 426
G TT T L A E + R ER P +G+ +
Sbjct: 73 PVGDDTTTTVATVLAHGPQAKAELVLTDPRGGGPETRVAVPLDQLAAVDERTPLAEGRRV 132
Query: 427 CYL----PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
L P+P+L + +++VDTPG VP AD VL V A LTE E+
Sbjct: 133 LRLEIELPNPLLADGIVLVDTPGVGGQASAGAATVLSMVPAADAVLVVSDASTELTEPEL 192
Query: 482 VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA-ISFVKENTMKLLNIENVTIYPVS---- 536
FLR ++ V +L K+DLY + ++ A + ++ + +V I PVS
Sbjct: 193 GFLRQVRELCPTVALMLTKTDLYPHWRQVHHADLGHLERAGL------SVPILPVSALLR 246
Query: 537 --ARSTLEAKLSVSSAVGK 553
A T +A+L + S G+
Sbjct: 247 AHAMRTKDAQLGLESGYGE 265
>gi|168069587|ref|XP_001786504.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162661149|gb|EDQ48684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1049
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 406 FSDLASEEQQRCERHPDGQYI-CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRA 463
F ++E++ C +YI + P+ + +++VDTPG + I R + E++ A
Sbjct: 177 FKGFVAKEEKACF----AEYIELFYSCPLTDQGIVLVDTPGADSINARHTGVAFEYMKNA 232
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D VLFV + ++++ FL + K K+ F++N +DL + EL+ I+ V+
Sbjct: 233 DAVLFVTYYNHAFSQADREFLLQMGRVKDTFEMDKMFFIVNAADLAASEEELQGVITHVE 292
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKL 545
+N + I IYPVS+++ L A++
Sbjct: 293 KNLLT-CGIRLPRIYPVSSQTALLARM 318
>gi|158334596|ref|YP_001515768.1| dynamin-like protein [Acaryochloris marina MBIC11017]
gi|158304837|gb|ABW26454.1| bacterial dynamin-like protein [Acaryochloris marina MBIC11017]
Length = 693
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 52/237 (21%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F L+++G+ GKS+ +NAL+G+ L V P T +T LR+
Sbjct: 70 FRLMVLGDMKRGKSTFLNALIGENLLPSDVNPCTALLTILRYGPDKTVTVHFNDGKSPEQ 129
Query: 408 -DLAS---------EEQQRCERH-----PD-GQYICYLPSPILKEMI-IVDTPGTNVILQ 450
D AS EE ++ E PD + P P+L++ + IVD+PG N
Sbjct: 130 IDFASFKDRYTIDPEEAKQLEEQKQIAFPDVSHAVVEYPLPLLEKGVEIVDSPGLNDTEA 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAF- 508
R L+ F+ +LFV+ A +P T +E +L Y + + F++N D + +
Sbjct: 190 RND-LSLGFIQNCHAILFVLRATQPCTLAERRYLENYIKDRGLSIFFLINAWDQIKESLI 248
Query: 509 ------ELEEAISFVKE----NTMKLLNIENVTIY-----PVSARSTLEAKLSVSSA 550
ELE+A + + N + I+ +Y P+SA L ++ + A
Sbjct: 249 DPDDPEELEDATRKLHKVFHANLAEYCQIDGYDLYEERVFPISALQALRKRVKDTDA 305
>gi|381153704|ref|ZP_09865573.1| dynamin family protein [Methylomicrobium album BG8]
gi|380885676|gb|EIC31553.1| dynamin family protein [Methylomicrobium album BG8]
Length = 646
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C RH + P P+LKE + I+DTPG N L + LT +P A ++F+++AD
Sbjct: 191 CWRHA----LISFPHPLLKEGLAILDTPGLNA-LGTEPELTLSMLPSAQTIVFLLAADTG 245
Query: 476 LTESEVVFLR-----YTQQWKKKVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLN 526
+T+S++ R + K+ V V+NK D + E AI + + +L
Sbjct: 246 VTKSDLEMWRSHVFKVSSGSKQSVAVVMNKIDAMWDDLTGEKGYESAIHSQIKASADILR 305
Query: 527 IENVTIYPVSARSTLEAKL 545
I+ I+PVSA+ L AK+
Sbjct: 306 IDEKAIFPVSAKQALLAKV 324
>gi|302388619|ref|YP_003824440.1| thiamine-phosphate diphosphorylase [Thermosediminibacter oceani DSM
16646]
gi|302199247|gb|ADL06817.1| thiamine-phosphate diphosphorylase [Thermosediminibacter oceani DSM
16646]
Length = 212
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 96 LAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIA 154
L G D ++ ++EA+ + ++ L +A G+ YE A L+ + + + F+I +RVDIA
Sbjct: 16 LHGRDLVEAVEEAIRAGITVLQLREKDAPGREFYELALRLRELTRVYGIPFIINDRVDIA 75
Query: 155 AAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
AV+A GV + + +PA VAR + ++G + +T++ A A +GAD+L
Sbjct: 76 LAVDADGVHVGQEDIPADVARKIIGPG-------KILGVSAKTVEEAIRA-EKDGADYL 126
>gi|357403538|ref|YP_004915462.1| hypothetical protein MEALZ_0157 [Methylomicrobium alcaliphilum 20Z]
gi|351716203|emb|CCE21858.1| conserved protein of unknown function [Methylomicrobium
alcaliphilum 20Z]
Length = 646
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 15/139 (10%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C RH + P P+LKE + I+DTPG N L + LT +P A ++FV++AD
Sbjct: 191 CWRHA----LISFPHPLLKEGLCILDTPGLNA-LGTEPELTLNMLPSAQAIIFVLAADTG 245
Query: 476 LTESEVVFLR-----YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMK----LLN 526
+T+S++ R K + V+NK D + E E+ + +LN
Sbjct: 246 VTKSDLEMWRNHVCSARGGRKHGLAVVMNKIDSMWDDLAGETGYDAAIESQISTSAGILN 305
Query: 527 IENVTIYPVSARSTLEAKL 545
I+ +I+PVSA+ L AK+
Sbjct: 306 IDESSIFPVSAKQALLAKV 324
>gi|409387823|ref|ZP_11239962.1| Thiamin-phosphate pyrophosphorylase [Lactococcus raffinolactis
4877]
gi|399205125|emb|CCK20877.1| Thiamin-phosphate pyrophosphorylase [Lactococcus raffinolactis
4877]
Length = 130
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 96 LAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIA 154
L+ D L I++A+ V L E SG+S Y+ A +K+V + FLI +R+DIA
Sbjct: 17 LSEQDFLTQIEQAILGGATCVQLREKEMSGRSFYQLALQVKAVTDRYGVPFLINDRLDIA 76
Query: 155 AAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
AV+ASGV L + LP VAR + + LVG + +T+ A A+ GAD+L
Sbjct: 77 LAVDASGVHLGQRDLPVAVARQILGPN-------KLVGISAKTVAQAL-AAQIGGADYL 127
>gi|390453560|ref|ZP_10239088.1| GTPase (dynamin-related) protein [Paenibacillus peoriae KCTC 3763]
Length = 1226
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 400 EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
++ ++ D + E + C H D Y C L + +++VDTPG + + R +T
Sbjct: 762 QVNLEQYRDFVASEHKSCFVEHIDLYYDCALTR---QGIVLVDTPGADSVNARHTGVTFN 818
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVLNKSDLYQNAFELEEA 513
++ AD ++F+ + T+ + FL + K+ + F++N SDL + EL+
Sbjct: 819 YMKHADALVFITYYNHAFTQGDRQFLNQLGRVKETLALDQTFFIVNASDLASSEEELQSV 878
Query: 514 ISFVKENTMKLLNIENVTIYPVSARSTLEA 543
V+E ++ I IYP+S+ LEA
Sbjct: 879 TRHVQEQ-LQANGIRKPRIYPLSSMLALEA 907
>gi|427710367|ref|YP_007052744.1| small GTP-binding protein [Nostoc sp. PCC 7107]
gi|427362872|gb|AFY45594.1| small GTP-binding protein [Nostoc sp. PCC 7107]
Length = 451
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 29/159 (18%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ +L +S++D + + + G + GKS+V+NALLG++ L+ G + N +T
Sbjct: 47 ELEVLNATLSKLDSNLIKIAVFGLVSRGKSAVLNALLGEKILQTGPL---NGVT------ 97
Query: 409 LASEEQQRCERH--PDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADL 465
+ R R P G+ I L +DTPG + I + + ++ + +ADL
Sbjct: 98 ----QWPRSVRWQPPGGKIIVEL----------IDTPGLDEIAGESRAQMARDVARQADL 143
Query: 466 VLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+LFV+S D +T +E L +Q +K ++ V NK DLY
Sbjct: 144 ILFVVSGD--ITRTEYQGLLDLRQAQKPLILVFNKIDLY 180
>gi|57237467|ref|YP_178480.1| GTP-binding protein [Campylobacter jejuni RM1221]
gi|57166271|gb|AAW35050.1| GTP-binding protein [Campylobacter jejuni RM1221]
Length = 569
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +L + L GVVP T + TFLR++
Sbjct: 11 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRRDCLPTGVVPVTFKPTFLRYAKEYFLR 70
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 71 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 123
>gi|71909337|ref|YP_286924.1| hypothetical protein Daro_3725 [Dechloromonas aromatica RCB]
gi|71848958|gb|AAZ48454.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
Length = 649
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 429 LPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT 487
P P+LK+ ++I+DTPG N I + LT +P A VLF+++AD +T+S++ R
Sbjct: 197 FPHPLLKQGLVILDTPGLNAI-GAEPELTLSLLPNAHAVLFILAADTGVTQSDMAIWREH 255
Query: 488 ----QQWKKKVVFVLNK----SDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
K+ + VLNK D + A E++ I + +L + ++PVSA+
Sbjct: 256 ICGGGMAKRGRMVVLNKIDGQWDELKTAEEIDAEIERQVNTSADILELPASQVFPVSAQK 315
Query: 540 TLEAKLSVSSAV 551
L AK++ SA+
Sbjct: 316 GLVAKINGDSAL 327
>gi|118474116|ref|YP_891638.1| GTP-binding protein [Campylobacter fetus subsp. fetus 82-40]
gi|118413342|gb|ABK81762.1| GTP-binding protein [Campylobacter fetus subsp. fetus 82-40]
Length = 599
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--------------- 407
EP ++ +VG+++SGKSS +NALLG L GVVP T + T+++++
Sbjct: 56 EPPIVAVVGQFSSGKSSFLNALLGSDILPTGVVPVTAKPTYIKYAPNLMLKALFFDGRQE 115
Query: 408 -----DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
+L + QR Y P+ ILK++ +DTPG N T++ +
Sbjct: 116 YHSIDELGAFVDQRVSLKDVKCLNIYAPNEILKKVSFIDTPGLNSRSDADTYETKQILKE 175
Query: 463 ADLVLFVISADRPLTESEVVFLRYT-QQWKKKVVFVLNKSDLYQNAFELEEAISFVKENT 521
A ++++ D +SE+ L ++ + +LN+ D ++ E++ +S K
Sbjct: 176 AVALIWISLIDNAARKSELDELNLIPNSLRQNAICLLNQKDKLSSS-EIQNVLSHSKTTY 234
Query: 522 MKLLNIENVTIYPVSARSTLEA 543
+ I PVSA+ E
Sbjct: 235 ENYFS----DILPVSAKMQKEG 252
>gi|218885988|ref|YP_002435309.1| tRNA modification GTPase TrmE [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756942|gb|ACL07841.1| tRNA modification GTPase TrmE [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 478
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 29/155 (18%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPD 422
E L+V+ G N+GKSS++NALLG+R +P T D E Q
Sbjct: 220 EGALVVLAGHVNAGKSSLMNALLGRRRAIVTDMPGTTR-------DFIEEPVQ------- 265
Query: 423 GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ LP ++ + DT +++ Q R++ + V +ADLVL V+ A L +E
Sbjct: 266 ---LAGLPVRLVDTAGLRDT--GDIVEQEGVRISRDLVAQADLVLLVVDAAAGLGHAERE 320
Query: 483 FLRYTQQWKK----------KVVFVLNKSDLYQNA 507
LR+ + +V+ VLNK+DL A
Sbjct: 321 LLRHVRDQHAQVGRPGRPGGRVLVVLNKTDLAAEA 355
>gi|289766237|ref|ZP_06525615.1| thiamin-phosphate pyrophosphorylase [Fusobacterium sp. D11]
gi|289717792|gb|EFD81804.1| thiamin-phosphate pyrophosphorylase [Fusobacterium sp. D11]
Length = 206
Score = 56.2 bits (134), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+E++ V IV L S K YE A +K + K+ LF+I +R+DI A
Sbjct: 19 GKDFYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDITQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATARNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + + +VKIP+F + + +V G G + S+
Sbjct: 131 AIFGTSTKDNAKKLEMEDLKKIVNSVKIPVFAIGGININNVWMLKNIGLQG-ICSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 ----GILSEKDCKKAVEN 200
>gi|108763690|ref|YP_635018.1| hypothetical protein MXAN_6904 [Myxococcus xanthus DK 1622]
gi|108467570|gb|ABF92755.1| conserved domain protein [Myxococcus xanthus DK 1622]
Length = 565
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLID----AVSQIDEPFLLVIVGEYNSGKSSVINALLG 386
RS+L A++ + P + L+D V++ D P + +VG +GKS+++NAL G
Sbjct: 13 RSLLKTALE-LPALRPHAARLERLVDDYARGVARKDAPLSVALVGATGAGKSTLLNALAG 71
Query: 387 KRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSP--ILKEMIIVDTP 443
+ ++GV PT+ T ++ + + Y P P + + +DTP
Sbjct: 72 QALSREGVNRPTSTVATVFAPEGTPTDALAGS----GARVMTYAPGPQGLWGGQVFIDTP 127
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
N + + + + RAD+ L V+ S+V FL + ++ +VF+LN +D
Sbjct: 128 DLNSVATTHREVARAALERADVALVVMHRGSVAEASQVEFLTEFAR-RRSLVFILNFAD 185
>gi|425462896|ref|ZP_18842363.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9808]
gi|389823944|emb|CCI27466.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9808]
Length = 454
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLTTGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L +Q KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALEELRQAKKPIILVFNKIDLYPEA 184
>gi|333986074|ref|YP_004515284.1| hypothetical protein [Methylomonas methanica MC09]
gi|333810115|gb|AEG02785.1| hypothetical protein Metme_4442 [Methylomonas methanica MC09]
Length = 646
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C RH + P P+LKE + I+DTPG N L + LT +P A ++FV++AD
Sbjct: 191 CWRHA----LISFPHPLLKEGLCILDTPGLNA-LGTEPELTLSMLPSAQAIVFVLAADTG 245
Query: 476 LTESEVVFLRY-----TQQWKKKVVFVLNKSDLYQNAFELEE----AISFVKENTMKLLN 526
+T+S++ + Q ++ + V+NK D + E AI E + +LN
Sbjct: 246 VTKSDLEMWKSHVCSSRGQRRQGLAVVMNKIDSMWDDLAGETGYDAAIQKQIETSATILN 305
Query: 527 IENVTIYPVSARSTLEAKLSVSSAV 551
++ I+PVSA+ L AK+ A+
Sbjct: 306 LKQELIFPVSAKQALLAKVKGDEAL 330
>gi|440793406|gb|ELR14590.1| hypothetical protein ACA1_271250 [Acanthamoeba castellanii str.
Neff]
Length = 534
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 355 IDAVSQIDEPFLLVIVGEYNSGKSSVINALL--------GKRYLKDGVV----------- 395
+D +I ++V +G ++SGKS+ IN LL G+ + DG
Sbjct: 55 VDVPREIFSTPMVVFLGNHSSGKSTFINHLLNEPDLQTAGQAPMDDGFTLICHGNSRDEQ 114
Query: 396 --PTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT--NVILQR 451
P T L ++ L++ Q E + +LP P+LK++ +VD+PG +V R
Sbjct: 115 LGPAIVNNTKLPYTSLSNIGDQFVEH----LKMKFLPHPLLKQVTLVDSPGMIDSVGEGR 170
Query: 452 QQRLTEE---FVPRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSDLYQN 506
E F RAD VLF ++P T E +F + K++ ++NK D ++N
Sbjct: 171 GYDFAEAVRWFADRADYVLFFFDGEKPGTTGETLKIFTQSLSGMDHKLLILMNKVDTFKN 230
>gi|89900445|ref|YP_522916.1| hypothetical protein Rfer_1655 [Rhodoferax ferrireducens T118]
gi|89345182|gb|ABD69385.1| conserved hypothetical protein [Rhodoferax ferrireducens T118]
Length = 659
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 22/138 (15%)
Query: 429 LPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT 487
+ P+LK+ ++I+DTPG N I + LT +P+A V+F++ AD +T+S++
Sbjct: 199 IAHPLLKQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVFILGADTGVTKSDLAI---- 253
Query: 488 QQWKKKVV----------FVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIY 533
W++ +V VLNK D +A +++ I + +T ++L I +
Sbjct: 254 --WREHLVDDSVDASSRLVVLNKIDTLWDALSSPAQVQAQIERQQASTAEILGIPRQQVI 311
Query: 534 PVSARSTLEAKLSVSSAV 551
PVSA+ L AK++ SA+
Sbjct: 312 PVSAQKGLVAKVTDDSAL 329
>gi|440754322|ref|ZP_20933524.1| small GTP-binding domain protein [Microcystis aeruginosa TAIHU98]
gi|443650761|ref|ZP_21130539.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159026130|emb|CAO86348.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|440174528|gb|ELP53897.1| small GTP-binding domain protein [Microcystis aeruginosa TAIHU98]
gi|443334652|gb|ELS49154.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 454
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLTTGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L +Q KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALEELRQAKKPIILVFNKIDLYPEA 184
>gi|283779176|ref|YP_003369931.1| GTP-binding protein HSR1-like protein [Pirellula staleyi DSM 6068]
gi|283437629|gb|ADB16071.1| GTP-binding protein HSR1-related protein [Pirellula staleyi DSM
6068]
Length = 451
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 28/144 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRY----LKDGVVPTTNEITFLRFSDLASEEQQRCERHPD 422
+V+ GE + GKS++INAL+G+ ++ G ++ + D
Sbjct: 58 IVVFGEISVGKSALINALIGRDVAAVDVRGGWTKEVWQVAW------------------D 99
Query: 423 GQYICYLPSPILKEMIIVDTPGTNVI--LQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
G C LP + ++++VDTPG N + R +R E RADL+LFV +D E E
Sbjct: 100 GAGYC-LPGLGVSQVVLVDTPGINEVGGSTRGER-AREAAQRADLLLFVTDSD--FNEVE 155
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLY 504
L + K ++ VL+KSDLY
Sbjct: 156 HDSLSSLVTFHKPIIVVLSKSDLY 179
>gi|113474366|ref|YP_720427.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
gi|110165414|gb|ABG49954.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
Length = 475
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG++ + G + + T +R L + E
Sbjct: 68 IAVFGMVGRGKSSLLNALLGEKVFETGPIHGVTKTTKIRQWQLGRDNLTEIESSSTNSLT 127
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
Y S ++ ++DTPG + V + ++ + + +ADL+LF ++ D +T+ E L
Sbjct: 128 SYRIS----QVELIDTPGIDEVDGETRELMARQVAKQADLLLFAVAGD--ITQVEYEALS 181
Query: 486 YTQQWKKKVVFVLNKSDLY 504
Y + K ++ V NK D Y
Sbjct: 182 YLRDAGKPILLVFNKIDQY 200
>gi|313116995|ref|YP_004038119.1| thiamine-phosphate diphosphorylase [Halogeometricum borinquense DSM
11551]
gi|448286428|ref|ZP_21477658.1| thiamine-phosphate pyrophosphorylase [Halogeometricum borinquense
DSM 11551]
gi|312294947|gb|ADQ68983.1| thiamine-phosphate diphosphorylase [Halogeometricum borinquense DSM
11551]
gi|445574700|gb|ELY29194.1| thiamine-phosphate pyrophosphorylase [Halogeometricum borinquense
DSM 11551]
Length = 214
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 104 LIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNASGV 162
++ A+ V IV + S + YE L+++ ++ + F++ +RVDIAAAV+A GV
Sbjct: 24 IVRAAIEGGVDIVQMREKHTSARERYELGKELRALTREADIPFVVNDRVDIAAAVDADGV 83
Query: 163 LLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
L D LP VAR D + E + +GR+V T +AA A + GAD+L
Sbjct: 84 HLGDDDLPVSVAR----DHLGEEAI---IGRSVSTPEAASEAERA-GADYL 126
>gi|384442748|ref|YP_005659000.1| Putative ATP /GTP binding protein [Campylobacter jejuni subsp.
jejuni S3]
gi|424847244|ref|ZP_18271826.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni NW]
gi|315057835|gb|ADT72164.1| Putative ATP /GTP binding protein [Campylobacter jejuni subsp.
jejuni S3]
gi|356485531|gb|EHI15524.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni NW]
Length = 609
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +L + L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|170076662|ref|YP_001733300.1| GTPase [Synechococcus sp. PCC 7002]
gi|169884331|gb|ACA98044.1| GTPase of unknown function [Synechococcus sp. PCC 7002]
Length = 450
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 33/161 (20%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ L A++++D+ L + G + GKS+VINAL+G++ L+ G +
Sbjct: 46 ELQQLQTAIAKLDQNLLRIATFGLVSRGKSAVINALIGEKMLETGPL------------- 92
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMI---IVDTPGTNVIL-QRQQRLTEEFVPRAD 464
H QY + P+ E + +VDTPG + I + + ++ E +D
Sbjct: 93 -----------HGVTQYPRAVRWPLTTEKLKIELVDTPGLDEIAGEARTKMAAEVAANSD 141
Query: 465 LVLFVISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
L+LF+I+ D TE E ++ LR Q K ++ V NK DLY
Sbjct: 142 LILFIIAGDITRTEYESLYELR---QQHKPLLVVFNKIDLY 179
>gi|21674001|ref|NP_662066.1| thiamine-phosphate pyrophosphorylase [Chlorobium tepidum TLS]
gi|28201902|sp|Q8KD79.1|THIE_CHLTE RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|21647147|gb|AAM72408.1| thiamine-phosphate pyrophosphorylase [Chlorobium tepidum TLS]
Length = 204
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 100 DALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR-ALFLIAERVDIAAAVN 158
+ ++L A+ G+V L ASG+ +YE A ++++ ++ ALF++ +RVDIA AV+
Sbjct: 17 NPVELARMALQGGAGMVQLRRKTASGQELYEWAIRIQALCSEQQALFIVNDRVDIAMAVH 76
Query: 159 ASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFG 218
A GV L Q LPA AR + ++++ V + + AA +S G + F
Sbjct: 77 ADGVHLGQQDLPASAARALLA---PDAIIGVSVSNATEAIKAAEEGASYIGVGHIFPTFS 133
Query: 219 EGQKADVIENSLFTNV----KIPIFIMNASPLVDVSKFLKSGASGFVI 262
+ + ++ + + + ++P+ + + ++ +++GASG +
Sbjct: 134 KDKPSEPLGTASIRPIGRAAQLPVIAIGGIGHDNAAEVIRAGASGIAV 181
>gi|75910706|ref|YP_325002.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75704431|gb|ABA24107.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 457
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ L ++++D + + G + GKS+V+NALLG + L+ G + N +T
Sbjct: 54 EIEALNSTLNKLDSNVIRIAAFGLVSRGKSAVLNALLGSKILQTGPL---NGVT------ 104
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLVL 467
+ + P G+ I L +DTPG + I + + ++ + V +ADL+L
Sbjct: 105 ---QWPRSVRWQPGGKVIVEL----------IDTPGLDEIQGESRAQMARDVVRQADLIL 151
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
FV+S D +T +E L +Q +K ++ V NK DLY
Sbjct: 152 FVVSGD--ITRTEYQALLELRQAQKPLILVFNKIDLY 186
>gi|419691166|ref|ZP_14219342.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1893]
gi|380667606|gb|EIB83032.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
jejuni 1893]
Length = 609
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +L + L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|419620316|ref|ZP_14153758.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 51494]
gi|419674098|ref|ZP_14203527.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 51037]
gi|380600654|gb|EIB20983.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 51494]
gi|380651962|gb|EIB68478.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 51037]
Length = 609
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +L + L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|303248327|ref|ZP_07334588.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
gi|302490235|gb|EFL50149.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
Length = 487
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 324 KQLIETERSVLLEAIDVIKKASPLMEEVSLLID---AVSQIDEPFLLVIVGEYNSGKSSV 380
K+ ++ E +L++A++ K + + LL + +SQI L+ ++G +++GKS+
Sbjct: 14 KEHLQLENPLLVDAVESFGKLDKVCRGLGLLGNDQSTISQIAWWPLISVLGPFSAGKSTF 73
Query: 381 INALL-------GKRYLKDG-------------VVPTTNEITFLRFSDLA-SEEQQRCER 419
IN+ L G + D V+P T LRF SEE ++ E
Sbjct: 74 INSYLDMPVQQTGSHAVDDKFTVICYNAAGESRVLPGTALNADLRFPFYKMSEELEKVEP 133
Query: 420 HPDGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQ--RLTEEFVPRADLVLFVISA 472
G+ Y+ PS L+ +I++D+PG + QR R+T + +DLVL + A
Sbjct: 134 GEGGRIDSYIRLKTSPSDKLRGLILIDSPGFDADAQRTATLRITNHIMDLSDLVLVLFDA 193
Query: 473 DRPL------TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
RP T + +V ++ K +++LN+ D+ EE +
Sbjct: 194 RRPEPGAMRDTLTHLVAATINRRDSNKFIYILNQMDIAAREDNPEEVVG 242
>gi|444910301|ref|ZP_21230486.1| hypothetical protein D187_08571 [Cystobacter fuscus DSM 2262]
gi|444719238|gb|ELW60035.1| hypothetical protein D187_08571 [Cystobacter fuscus DSM 2262]
Length = 564
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERH 420
D P + +VG +GKS+++NAL G+ ++G PT+ T LA EE
Sbjct: 46 DAPLTVALVGATGAGKSTLLNALAGQALAREGEDRPTSTAATVFAPESLALEELAGV--- 102
Query: 421 PDGQYICYLPSP--ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
+ + Y P P + + +DTP N + + + + RAD+ L V+
Sbjct: 103 -GARVVRYTPGPRGLWSGQVFIDTPDLNSVATVHREVARAALERADVALVVMHRGSVAEA 161
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKL------LNIENVTI 532
++ FL + ++ +VF++N +D + + E EA+ K +L + E+V +
Sbjct: 162 TQAEFLAEFAR-RRALVFLVNFAD--ELSAESREAL---KSQARRLAVERYGMEAESVPV 215
Query: 533 YPVSARS 539
+ +S R+
Sbjct: 216 FAISGRA 222
>gi|423454872|ref|ZP_17431725.1| hypothetical protein IEE_03616 [Bacillus cereus BAG5X1-1]
gi|401135841|gb|EJQ43438.1| hypothetical protein IEE_03616 [Bacillus cereus BAG5X1-1]
Length = 1219
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+ QID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALMQIDK----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C H + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHFGEQVQVTLEEFSDYVANEEKSCFVEHMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R S+
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSNRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|374324409|ref|YP_005077538.1| GTPase (dynamin-related) protein [Paenibacillus terrae HPL-003]
gi|357203418|gb|AET61315.1| GTPase (dynamin-related) protein [Paenibacillus terrae HPL-003]
Length = 1224
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 400 EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
++ ++ D + E + C H D Y C L + +++VDTPG + + R +T
Sbjct: 763 QVNLEQYRDFVASEHKSCFVEHIDLYYDCALTR---QGIVLVDTPGADSVNARHTGVTFN 819
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVLNKSDLYQNAFELEEA 513
++ AD ++FV + T+ + FL + K+ + F++N +DL + EL+
Sbjct: 820 YMKHADALVFVTYYNHAFTQGDRQFLNQLGRVKETLALDQTFFIVNAADLASSEEELQSV 879
Query: 514 ISFVKENTMKLLNIENVTIYPVSARSTLEA 543
V+E + I IYP+S+ LEA
Sbjct: 880 TQHVQEQ-LHANGIRKPRIYPLSSMLALEA 908
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS--------------- 407
E + G +++GKSS+IN+L GK L G VPT+ + +R+
Sbjct: 45 EELTIAFCGHFSAGKSSLINSLCGKTVLPSGPVPTSANVVSIRYGRSRALIHPAKTSENP 104
Query: 408 ------DLASEEQQRCERHPDGQYI-CYLPSPILK-EMIIVDTPGTNVILQRQQRLTEEF 459
SE + C+ + I + P+L +++DTPG + T
Sbjct: 105 ESEALETSLSELAEYCKNGGAYESIQVWEDVPMLAGGGVLLDTPGVDSTDHGHALATHSA 164
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ AD+V +V+ + +E+ + F + W K + ++N+ D ++
Sbjct: 165 LHWADIVFYVMDYNHVQSENNLSFAKSLSDWGKPLYLIINQIDKHR 210
>gi|237654278|ref|YP_002890592.1| hypothetical protein Tmz1t_3622 [Thauera sp. MZ1T]
gi|237625525|gb|ACR02215.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 654
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 10/135 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++++DTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 195 VIQFPHPLLEQGLVVLDTPGLNAI-GAEPELTLSMLPNAHAVLFILAADTGVTQSDLAVW 253
Query: 485 R-YTQ---QWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVS 536
R Y Q + ++ + VLNK D + +E I ++ L +E ++PVS
Sbjct: 254 RNYVQAGSERQRGRLVVLNKIDGLWDGLRDEARIEAEIGRQVDSVAATLGVEPAAVFPVS 313
Query: 537 ARSTLEAKLSVSSAV 551
A+ L A++ A+
Sbjct: 314 AQKGLVARIQGDEAL 328
>gi|425442824|ref|ZP_18823061.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9717]
gi|389716026|emb|CCH99689.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9717]
Length = 454
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLATGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L +Q KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALAELRQAKKPIILVFNKIDLYPEA 184
>gi|359457594|ref|ZP_09246157.1| dynamin-like protein [Acaryochloris sp. CCMEE 5410]
Length = 727
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F L+++G+ GKS+ +NAL+G+ L V P T +T LR+
Sbjct: 104 FRLMVLGDMKRGKSTFLNALIGENLLPSDVNPCTALLTILRYGPDKTVTVHFNDGKSPEQ 163
Query: 408 -DLAS---------EEQQRCERH-----PD-GQYICYLPSPILKEMI-IVDTPGTNVILQ 450
D AS EE ++ E PD + P P+L++ + IVD+PG N
Sbjct: 164 IDFASFKDRYTIDPEEAKQLEEQKQIAFPDVSHAVVEYPLPLLEKGVEIVDSPGLNDTEA 223
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSD 502
R L+ F+ +LFV+ A +P T +E +L Y + + F++N D
Sbjct: 224 RND-LSLGFIQNCHAILFVLRATQPCTLAERRYLENYIKDRGLSIFFLINAWD 275
>gi|113477293|ref|YP_723354.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
gi|110168341|gb|ABG52881.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
Length = 481
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 344 ASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT 402
+S + ++ LL + ++D+ + + + G + GKS+V+NALLG++ L+ G + N +T
Sbjct: 74 SSTVKTQLELLKSNIDKLDQGVIQIAVFGLVSRGKSAVLNALLGEKILETGPL---NGVT 130
Query: 403 FLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVP 461
+ R R ++ + + K + ++DTPG + V Q + + +E
Sbjct: 131 ----------KWPRSIRWTPNIFVNFHQQEVAK-VDLIDTPGLDEVADQVRGEMAKEVTR 179
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D +T +E L ++ KK ++ V NK DLY
Sbjct: 180 QADLILFVVSGD--ITRTEYDALYELKKSKKPLILVFNKIDLY 220
>gi|427738063|ref|YP_007057607.1| DnaJ-class molecular chaperone with C-terminal Zn finger domain
[Rivularia sp. PCC 7116]
gi|427373104|gb|AFY57060.1| DnaJ-class molecular chaperone with C-terminal Zn finger domain
[Rivularia sp. PCC 7116]
Length = 730
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 48/236 (20%)
Query: 355 IDAVSQ--IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD---- 408
I+A+S I+ F + + G +N GKS+++NALLG + L ++PTT +++ D
Sbjct: 32 IEAISHHLINPNFRIAVFGPFNHGKSTLLNALLGNKTLPIDLIPTTGAAITVKYGDELAT 91
Query: 409 --------------------LASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNV 447
A + R R+ + P P LK + +D PGTN
Sbjct: 92 LIKCIDGKQIHRSGTDILKEFAILDDDRRMRNDVASVEVFSPHPFLKTGVEFLDLPGTND 151
Query: 448 ILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSD 502
+ Q L +E + ADLV+ ++ A + +T E LR W K V+FV N
Sbjct: 152 -REEQNNLVKEQLLSADLVVQLLDARKLMTLEERENLR---DWLLDRGIKTVIFVAN--- 204
Query: 503 LYQNAFELEEA------ISFVKENTMKLLNIENVTIYPVSARSTLEAKLS--VSSA 550
+ N E EE + FV E+ L +Y V A L A+L VS+A
Sbjct: 205 -FLNLLEPEEQKQVQSRLRFVAESFRSQLPPGFSNLYRVDALPALRARLKGDVSAA 259
>gi|425456157|ref|ZP_18835868.1| Small GTP-binding protein [Microcystis aeruginosa PCC 9807]
gi|389802809|emb|CCI18183.1| Small GTP-binding protein [Microcystis aeruginosa PCC 9807]
Length = 454
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLATGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L +Q KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRQAKKPIILVFNKIDLYPEA 184
>gi|448407879|ref|ZP_21574074.1| thiamine-phosphate pyrophosphorylase [Halosimplex carlsbadense
2-9-1]
gi|445675129|gb|ELZ27664.1| thiamine-phosphate pyrophosphorylase [Halosimplex carlsbadense
2-9-1]
Length = 212
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 102 LDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNAS 160
L +++ A+A V +V L + S + Y L+++ ++ + F++ +RVD+A AV+A
Sbjct: 21 LSVVEAAIAGGVDVVQLREKDRSARERYHVGRKLRALTREAGVTFVVNDRVDLAEAVDAD 80
Query: 161 GVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--VCCFG 218
GV L D LP VAR+ + ++GR+V +D A A + GAD+L +
Sbjct: 81 GVHLGDDDLPVSVARDQLGPD-------AVIGRSVSFVDDARRAEEA-GADYLGVGAVYA 132
Query: 219 EGQKADVIEN----------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
G K D+ ++ + V IP+ + + + +++GA G +
Sbjct: 133 TGSKNDIDDDEYEIGPERVGEIAAAVDIPVVGIGGVTADNAAPIVEAGADGVAV 186
>gi|407276278|ref|ZP_11104748.1| hypothetical protein RhP14_07242 [Rhodococcus sp. P14]
Length = 608
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG-----VVPTTNEITFLRFS-------- 407
+D +V+VG+ GKS +N+LL G VPT + F+
Sbjct: 46 VDPRLRVVVVGQLKQGKSQFVNSLLNLEVCSVGDDETTAVPTVVQNADRTFAELVLAEPG 105
Query: 408 ------DLASEEQQR---CERHPDGQYICYL----PSPILKE-MIIVDTPGTNVILQRQQ 453
DL +E QR G+ + L PSP+L + +++VDTPG
Sbjct: 106 RDPVRVDLPVDELQRVTPATPRAGGREVLRLEVNVPSPLLADGLVLVDTPGVGGHGNPHA 165
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
T +P AD V V A + TE E+ FLR Q ++ K+DLY + E+
Sbjct: 166 AATLGLLPAADAVFVVSDASQEFTEPELSFLRQVLQLCPAAAVLITKTDLYPHWREI 222
>gi|425447977|ref|ZP_18827958.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9443]
gi|389731363|emb|CCI04581.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9443]
Length = 454
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLATGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L +Q KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRQAKKPIILVFNKIDLYPEA 184
>gi|375308941|ref|ZP_09774223.1| GTPase (dynamin-related), partial [Paenibacillus sp. Aloe-11]
gi|375079153|gb|EHS57379.1| GTPase (dynamin-related), partial [Paenibacillus sp. Aloe-11]
Length = 620
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 405 RFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA 463
++ D + E + C H D Y C L + +++VDTPG + + R +T ++ A
Sbjct: 162 QYRDFVASEHKSCFVEHIDLYYDCALTR---QGIVLVDTPGADSVNARHTGVTFNYMKHA 218
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVLNKSDLYQNAFELEEAISFVK 518
D ++F+ + T+ + FL + K+ + F++N SDL + EL+ V+
Sbjct: 219 DALVFITYYNHAFTQGDRQFLNQLGRVKETLALDQTFFIVNASDLASSEEELQSVTRHVQ 278
Query: 519 ENTMKLLNIENVTIYPVSARSTLEA 543
E ++ I IYP+S+ LEA
Sbjct: 279 EQ-LQANGIRKPRIYPLSSMLALEA 302
>gi|423472449|ref|ZP_17449192.1| hypothetical protein IEM_03754 [Bacillus cereus BAG6O-2]
gi|402427981|gb|EJV60079.1| hypothetical protein IEM_03754 [Bacillus cereus BAG6O-2]
Length = 1219
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EITF 403
E++ L +A+ QID+ ++ SGK + L R ++ G N ++T
Sbjct: 697 EIATLEEALMQIDK----IMKYPSPSGKQKTTFSFL--RAVQKGYEAVANHFGEQVQVTL 750
Query: 404 LRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
FSD + E++ C H + Y C L + + +VDTPG + I R + +++
Sbjct: 751 EEFSDYVANEEKSCFVEHMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYIKN 807
Query: 463 ADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFV 517
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE ++
Sbjct: 808 ADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEEELEMVKGYI 867
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
+ ++ I N ++ +S+ LE K
Sbjct: 868 ADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R S+
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSNRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|389848111|ref|YP_006350350.1| thiamine-phosphate pyrophosphorylase [Haloferax mediterranei ATCC
33500]
gi|448618208|ref|ZP_21666553.1| thiamine-phosphate pyrophosphorylase [Haloferax mediterranei ATCC
33500]
gi|388245417|gb|AFK20363.1| thiamine-phosphate pyrophosphorylase [Haloferax mediterranei ATCC
33500]
gi|445747763|gb|ELZ99218.1| thiamine-phosphate pyrophosphorylase [Haloferax mediterranei ATCC
33500]
Length = 214
Score = 55.5 bits (132), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAAA 156
G LD++ AV V +V L AS + YE C ++ V D + L+ +RVDIAAA
Sbjct: 18 GRTTLDVVQAAVDGGVDVVQLREKHASARERYETGCEVRDVTADAGVSLVVNDRVDIAAA 77
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
++A GV L D +P VAR + ++GR+V T+
Sbjct: 78 IDADGVHLGDDDVPVSVAREQLGADT-------IIGRSVSTV 112
>gi|452947882|gb|EME53364.1| hypothetical protein G352_24221 [Rhodococcus ruber BKS 20-38]
Length = 608
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG-----VVPTTNEITFLRFS-------- 407
+D +V+VG+ GKS +N+LL G VPT + F+
Sbjct: 46 VDPRLRVVVVGQLKQGKSQFVNSLLNLEVCSVGDDETTAVPTVVQNADRTFAELVLAEPG 105
Query: 408 ------DLASEEQQR---CERHPDGQYICYL----PSPILKE-MIIVDTPGTNVILQRQQ 453
DL +E QR G+ + L PSP+L + +++VDTPG
Sbjct: 106 RDPVRVDLPVDELQRVTPATPRAGGREVLRLEVNVPSPLLADGLVLVDTPGVGGHGNPHA 165
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
T +P AD V V A + TE E+ FLR Q ++ K+DLY + E+
Sbjct: 166 AATLGLLPAADAVFVVSDASQEFTEPELSFLRQVLQLCPAAAVLITKTDLYPHWREI 222
>gi|389816250|ref|ZP_10207413.1| hypothetical protein A1A1_05112 [Planococcus antarcticus DSM 14505]
gi|388465243|gb|EIM07562.1| hypothetical protein A1A1_05112 [Planococcus antarcticus DSM 14505]
Length = 337
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 32/164 (19%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
+D+ L+ ++GE N+GKSS +N ++G+ D+AS
Sbjct: 28 LDQELLISLIGEVNAGKSSTVNKIIGE--------------------DIAS-----TNPM 62
Query: 421 PDGQYICYLPSPI--LKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI-SADRPLT 477
P G+ + P I L+ + +DTPG N + T EFV ++D+VLF + +A +
Sbjct: 63 P-GETVSVDPYNIRGLENIKFMDTPGLNDPNDENPKKTLEFVQKSDVVLFFLNAAGTVFS 121
Query: 478 ESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENT 521
ESE ++ K ++ VLNK D +N + + FV+E+T
Sbjct: 122 ESEKGKFNEIEKHNKDILIVLNKIDAAEN---IPSIVQFVQEHT 162
>gi|229028705|ref|ZP_04184816.1| hypothetical protein bcere0028_8170 [Bacillus cereus AH1271]
gi|228732618|gb|EEL83489.1| hypothetical protein bcere0028_8170 [Bacillus cereus AH1271]
Length = 688
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 37/235 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
EE+ +L + ++ I +V VG+++ GKS ++NALLG+++L + +T T R
Sbjct: 29 EEIQVLHNRINSITSS--IVAVGQFSVGKSELLNALLGEKFLASRRMESTKVTT--RIHK 84
Query: 409 LASEEQQRCERHPDG---------------QYIC---------------YLPSPIL-KEM 437
++E ++ H QY Y P L +
Sbjct: 85 CMNDEMRKIILHYKNGEKKELPITDISILDQYTTFQGSREGEELEFVDVYWPLQFLDNHL 144
Query: 438 IIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
++VDTPG N + + +TE+ + +A VL++ + + + ++++ L+ +KKV V
Sbjct: 145 LLVDTPGANSLTEDAFIVTEKELEKASSVLYLFNGQKGIDQTDLSLLKDLMNRRKKVFIV 204
Query: 498 LNKSDLYQNAFELEEAISFVKENTMKLLNI-ENVTIYPVSARSTLEAKLSVSSAV 551
D + EL+ IS V++ + ++ +++ IYPVS+ L+AK + S++
Sbjct: 205 ATHVDGLTDE-ELKSVISSVQDKLEQEIDYSKSIKIYPVSSPEALQAKQTGDSSL 258
>gi|239817307|ref|YP_002946217.1| hypothetical protein Vapar_4340 [Variovorax paradoxus S110]
gi|239803884|gb|ACS20951.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 655
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 22/135 (16%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I +P P+L++ ++I+DTPG N I + LT +P+A V+F++ A+ +T S++
Sbjct: 196 ILNMPHPLLEQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVFILGAETGVTRSDLSI- 253
Query: 485 RYTQQWKKKVV----------FVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
W++ +V VLNK D ++ ++E I +E K L + V
Sbjct: 254 -----WREHLVTESEGSDTRFVVLNKIDTMWDSLSTPAQIELQIERQREVAAKFLEVPLV 308
Query: 531 TIYPVSARSTLEAKL 545
+ PVSA+ L+AK+
Sbjct: 309 QVLPVSAQKGLQAKI 323
>gi|253996001|ref|YP_003048065.1| hypothetical protein Mmol_0628 [Methylotenera mobilis JLW8]
gi|253982680|gb|ACT47538.1| conserved hypothetical protein [Methylotenera mobilis JLW8]
Length = 695
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 430 PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYT 487
P P+LK ++++DTPG N + + LT +P A +LF+ + D +T+S++ ++ Y
Sbjct: 215 PHPLLKNGLVVLDTPGLNT-MGAEPELTLSILPNAQAILFLTATDTGITKSDMQIWNSYV 273
Query: 488 QQWKKKVVFVLNKSDLYQNAFELEEAISFVKE----NTMKLLNIENVTIYPVSARSTLEA 543
Q+ + VLNK D+ + E + + + + NT L +++ I+ +SA+ L A
Sbjct: 274 QKRAAHKLVVLNKIDILWDGLESDAEVELLIQKQIKNTAHELGLDSKNIFAISAQKALVA 333
Query: 544 KLSVSSAV----GKDHSELSV 560
K+ A+ G +H E S+
Sbjct: 334 KIRKDEALLKRSGINHLENSL 354
>gi|333371076|ref|ZP_08463038.1| hypothetical protein HMPREF9374_0783, partial [Desmospora sp. 8437]
gi|332976520|gb|EGK13361.1| hypothetical protein HMPREF9374_0783 [Desmospora sp. 8437]
Length = 743
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-------------- 407
D F++ G +++GKS+++N L GK L +PT+ + +R
Sbjct: 42 DREFVIAFCGHFSAGKSTLLNGLYGKNLLPTSPIPTSANVVKVRAGENRVVLTLHSGERR 101
Query: 408 ----DLASEEQQR-CERHPDGQYICYLP-----SPILKEMIIVDTPGTNVILQRQQRLTE 457
D + ++ +R C+R G + L +P+ K + ++DTPG + Q TE
Sbjct: 102 LFRGDYSDDDLKRLCKR---GDEVIALDIYRKDAPLPKGVALLDTPGVDSTDDAHQAATE 158
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ ADL+ +V+ + +E + F++ K++ V+N+ D ++
Sbjct: 159 SALHLADLIFYVMDYNHVQSEVNLRFIKELSARGKRIWLVINQVDKHR 206
>gi|345888429|ref|ZP_08839516.1| hypothetical protein HMPREF0178_02290 [Bilophila sp. 4_1_30]
gi|345040717|gb|EGW44949.1| hypothetical protein HMPREF0178_02290 [Bilophila sp. 4_1_30]
Length = 871
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 158/402 (39%), Gaps = 97/402 (24%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKR--------------------YLKDGVVPTTNEIT 402
+PF +VIVGE GKSS+INA++G+ + D V +
Sbjct: 225 QPFKIVIVGERKRGKSSLINAIIGQELSPVRESTPETATVVEFKYAHAPDYSVRFLDSSQ 284
Query: 403 FLRFSDLASEEQQ-----RCERH-----PDGQYI---------CY--------------- 428
F R D EQ R H DG +I C+
Sbjct: 285 FARLEDYLENEQDNLLLTRKIEHIRKGVSDGTFIPGKLLSGITCWDDLSDYISLEGRFSG 344
Query: 429 --------LPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTES 479
LP L+ +++VDTPG N Q L+ E AD V+FV+ A P + S
Sbjct: 345 FVARVSVGLPLDTLRAGVVLVDTPGLNDTDQFHDYLSYEESLEADCVIFVMDARDPGSNS 404
Query: 480 EVVFLRYTQQWKKKV--VFVLNKSDLYQNAFEL----EEAISFVKENTMKLLNIENVTIY 533
E+ LR + + V + VL D +A L E+A + ++E +++ +
Sbjct: 405 ELSLLRKLARSGRTVSIIGVLTNIDRLNSAASLEVAREQARTVLREACRSSGHVKLAGVV 464
Query: 534 PVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMR 593
++ R +E + SA + S++S + S ++L LL +D GKE R
Sbjct: 465 ALNTRQAVEERCRGGSAFSETLSKVSRSVSG--CGELEQLLALLREIMD--RDAGKEAYR 520
Query: 594 LKL-ETPIRIA----ERL----------LSSCETLVMKDCQDAKQDLTLANEMIDSLKEY 638
K+ E RIA ERL L + E L M D AKQ L+ + SL++
Sbjct: 521 HKIAEAYSRIADSARERLRQHVQEYRESLPNPELLGMLDAH-AKQ---LSASALSSLEQA 576
Query: 639 VMKMESESISWRRKTLSLIDSTKSRVVKLIESTLQISNLDIV 680
+ + + K L D + + +K TL + +D V
Sbjct: 577 RQVVNAAA-----KDLDAWDESTEKALKKFHETLVLRLMDAV 613
>gi|427418437|ref|ZP_18908620.1| thiamine-phosphate diphosphorylase [Leptolyngbya sp. PCC 7375]
gi|425761150|gb|EKV02003.1| thiamine-phosphate diphosphorylase [Leptolyngbya sp. PCC 7375]
Length = 350
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 92 PHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR-ALFLIAER 150
PH L LD+++ A+ + IV +A E A +K++ +LF++ +R
Sbjct: 162 PHDHL-----LDVVESALKGGIDIVQYREKQADDDVRLELASKIKALCHQYDSLFIVNDR 216
Query: 151 VDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGA 210
VDIAAAV A GV L Q LP AR + LP+VGR+ T + EGA
Sbjct: 217 VDIAAAVGADGVHLGQQDLPMAAARRILGP-------LPIVGRST-TNSVEMARAIDEGA 268
Query: 211 DFL------VCCFGEGQKA---DVIENSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFV 261
D++ G+ A D I ++ N +P F + L +V+ +GA G
Sbjct: 269 DYIGVGPVYATPTKPGKAAAGYDYIRYAV-ENAPMPWFAIGGIDLTNVALVRDAGAPGVA 327
Query: 262 I 262
I
Sbjct: 328 I 328
>gi|325964549|ref|YP_004242455.1| hypothetical protein Asphe3_32130 [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470636|gb|ADX74321.1| hypothetical protein Asphe3_32130 [Arthrobacter phenanthrenivorans
Sphe3]
Length = 662
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 53/223 (23%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI-----TFLRFSDLASE---- 412
D +++VGE+ GKS +INAL+ V P ++I T +R+ D AS
Sbjct: 50 DPSIRVIVVGEFKQGKSKLINALVNA-----PVCPVDDDIATSVPTVVRYGDPASASILV 104
Query: 413 --------EQQRCERHPD----------------------GQYICYLPSPILKE-MIIVD 441
++ ER P +C LP +L + I+D
Sbjct: 105 PKADADAVDEGNVERQPINIADLAAFVSERGNPGNSKKLVAAEVC-LPRKLLTGGLTIID 163
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKS 501
+PG + T +P AD +L V A + TE E+ FLR + VV +L+K+
Sbjct: 164 SPGVGGMGSSHTLTTLTALPTADAMLLVSDASQEYTEPELRFLRQAMRITPSVVGILSKT 223
Query: 502 DLYQNAFELEEAISFVKENTMKLLNI-ENVTIYPVSARSTLEA 543
DLY + +EE + L + +++ +YPVS+ LEA
Sbjct: 224 DLYPDWRRVEEL------DRAHLAQVAQDIPLYPVSSDLRLEA 260
>gi|387927723|ref|ZP_10130402.1| Dynamin family protein [Bacillus methanolicus PB1]
gi|387589867|gb|EIJ82187.1| Dynamin family protein [Bacillus methanolicus PB1]
Length = 916
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI----------------------TFL 404
L I G +GKS+ IN++LG+ L PT++ I +F
Sbjct: 379 LFIAGTSGNGKSAFINSVLGENILTG---PTSSVILFKGHDESEIRKISDEELSAVSSFQ 435
Query: 405 RFSDLASEEQQRCERHPDGQYICY-LPSPILKE--MIIVDTPGTNVILQRQQRLTEE--- 458
F DL ++R + D I + LPSPIL+E + ++DTPG N + R+ E
Sbjct: 436 EFQDLV---ERRSNKSFDNAIIEFSLPSPILQENSIALIDTPGFN----ERNRIESEALK 488
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKK--VVFVLNKSDLYQNAFELEEAISF 516
++ AD +LFV+ A+ P TE E L +++ + F+LNK D + E + +
Sbjct: 489 YLHFADSLLFVLDANDPFTEREQEILMQIREYAPNLPIHFLLNKIDEIYDEHEAAKIVEE 548
Query: 517 VKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKL 576
+ NV Y RS + D +E N + +IN D++EK+
Sbjct: 549 TRSRVRAFFPQANVFAYSSQLRSRKQQ---------NDLAEFLKNFNR-QINEDDRIEKI 598
Query: 577 L 577
L
Sbjct: 599 L 599
>gi|377572241|ref|ZP_09801333.1| hypothetical protein GOTRE_170_00290 [Gordonia terrae NBRC 100016]
gi|377530581|dbj|GAB46498.1| hypothetical protein GOTRE_170_00290 [Gordonia terrae NBRC 100016]
Length = 464
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 46/199 (23%)
Query: 340 VIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
++ + PL + + L +Q+ EP + +VG +SGKS+++NAL+G R V T+
Sbjct: 14 LLDEVGPLSPDTAGLSALRAQLAEPLTVALVGRVSSGKSTLLNALVGDR------VAPTD 67
Query: 400 EITFLRFSDLASE-EQQRCE--------------------RHPD--GQYICYLPSPILKE 436
R + L +E QR E R P+ I + PS +L+E
Sbjct: 68 RAECTRVAALYTEGNPQRVEVIGLDGTVTELPGPMRGDLGRPPEEIDHAIVHTPSRLLRE 127
Query: 437 MI-IVDTPG-----------TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+VDTPG T + RQ RL R D++LF++ EV FL
Sbjct: 128 RFRVVDTPGLSGFTDTAEIATRRVFGRQGRLA-----RPDVILFLLDDAAGPKADEVAFL 182
Query: 485 RYTQQWKKKVVFVLNKSDL 503
+ + V++++DL
Sbjct: 183 AEAGASAQNTILVISQADL 201
>gi|407643057|ref|YP_006806816.1| hypothetical protein O3I_009405 [Nocardia brasiliensis ATCC 700358]
gi|407305941|gb|AFT99841.1| hypothetical protein O3I_009405 [Nocardia brasiliensis ATCC 700358]
Length = 601
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 359 SQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL---KDGVVPTTNE------ITFLRFSD 408
+++ +P + LV+VGE +G S+++N+L+G D VP E T +R D
Sbjct: 49 ARVSDPRVRLVVVGEPKNGMSTLVNSLVGASVSATDSDLSVPVIVEYGPEPTATLVRSVD 108
Query: 409 LASEEQQRCERHPDGQYICYL---------PSPILKEMIIV-DTPGTNVILQRQQRLTEE 458
+E Q P G I PSP+L + ++V D PGT T
Sbjct: 109 GRTERQSVDPLDP-GPAISAFGVIRAEFTQPSPLLADGVVVMDAPGTR---GAADNTTWS 164
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
+ AD VL+V +A LT ++ +L+ QQ V+ VLNK D + + S +
Sbjct: 165 MIAAADAVLYVGNAATELTVDQIAYLQRIQQICPTVICVLNKIDQFSH-------WSHTQ 217
Query: 519 ENTMKLLNIENV--TIYPVSARSTLEAKLS 546
+ +LL+ + + PVSA +A LS
Sbjct: 218 QRNRELLDAAGLGFAVAPVSAELHRQAGLS 247
>gi|452077665|gb|AGF93615.1| thiamine-phosphate diphosphorylase [uncultured organism]
Length = 217
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 105 IDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIAERVDIAAAVNASGVLL 164
+++AV V ++ + G+ +YE AC +++V +D +LF++ +R+D+A AV A GV L
Sbjct: 34 VEKAVDAGVKMIQYRDKSSEGRELYEEACKIRAVCED-SLFIVNDRLDVAMAVGADGVHL 92
Query: 165 SDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
LP VAR+ + D M ++G + L+ A A E AD++
Sbjct: 93 GQDDLPPQVARDVVGDDM-------IIGISTHDLEQAEKA--KEIADYI 132
>gi|427732228|ref|YP_007078465.1| small GTP-binding protein domain-containing protein [Nostoc sp. PCC
7524]
gi|427368147|gb|AFY50868.1| small GTP-binding protein domain protein [Nostoc sp. PCC 7524]
Length = 497
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 371 GEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
G GKSS++NAL+G+ + GV T + + S+ A E +R R
Sbjct: 98 GMVGRGKSSLLNALVGQSVFETGPLHGVTRTAQSVNW-TISEEAIGETERAFR------- 149
Query: 427 CYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
LPS ++ ++DTPG + I + + L E+ +ADL+LFVI+ D E E L
Sbjct: 150 VTLPSVGKSQVELIDTPGLDEIDGETRTALAEQIAKQADLILFVIAGDMTKVEHEA--LS 207
Query: 486 YTQQWKKKVVFVLNKSDLY 504
++ K ++ V NK D Y
Sbjct: 208 QLREAGKPIILVFNKVDQY 226
>gi|329924911|ref|ZP_08279858.1| dynamin family [Paenibacillus sp. HGF5]
gi|328940295|gb|EGG36624.1| dynamin family [Paenibacillus sp. HGF5]
Length = 637
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 428 YLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
Y P+ ++ +++VDTPG + + R +T ++ AD +++V + ++++ FL
Sbjct: 201 YYSCPMTEQGIVLVDTPGADSLHARHTGVTFNYIKNADAIVYVTYYNHAFSKADRQFLSQ 260
Query: 487 TQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
+ K K+ F++N +DL Q+ EL E + V+ N + + + I+PVS+ + L
Sbjct: 261 LGRVKDSFALDKMFFIVNAADLAQSEDELNEVVKHVRTN-LTASGVGSPHIFPVSSLAAL 319
Query: 542 EAK 544
++K
Sbjct: 320 DSK 322
>gi|145594200|ref|YP_001158497.1| dynamin family protein [Salinispora tropica CNB-440]
gi|145303537|gb|ABP54119.1| Dynamin family protein [Salinispora tropica CNB-440]
Length = 603
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGK-----------------RY--------LKDGVVPTTNEI 401
+V+VGE+ GKSS++NAL+G RY L++G PT I
Sbjct: 52 VVVVGEFKKGKSSLVNALVGTNLCPVNDGPATATPTQVRYGEHVTAVVLREGEPPTREPI 111
Query: 402 TFLRFSDLASEEQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFV 460
E P LP +L +++VDTPG + +
Sbjct: 112 ALEDIRVHVVETDAGSGSAPPSAVEVSLPRKLLAGGLVLVDTPGVGGLNSAHATASLAAT 171
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
A+ V+FV A + LT +EV FL ++ V+ V+ K+D Y
Sbjct: 172 SMANAVVFVTDASQELTRTEVDFLYQVREMCPTVICVMTKTDFY 215
>gi|406576234|ref|ZP_11051896.1| hypothetical protein B277_15794 [Janibacter hoylei PVAS-1]
gi|404554365|gb|EKA59905.1| hypothetical protein B277_15794 [Janibacter hoylei PVAS-1]
Length = 574
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 22/196 (11%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD---- 408
+I +S ID P L V+ G SGKS+++N++L + + GV+ PTT + D
Sbjct: 55 VIPRLSSIDAPLLAVVGGSTGSGKSTLVNSILRREVSRSGVLRPTTTSPVLIHHPDDVRW 114
Query: 409 ------LASEEQQRCERHPDGQ--YICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEF 459
L S + + D Q + SP L M ++D P + ++ + L +
Sbjct: 115 FRDARVLPSLARVTGDEGADPQPGTVRLTASPTLPPGMAVLDAPDIDSVVSANRDLAAQL 174
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
+ ADL LFV +A R + LR V VL++ D A + V+
Sbjct: 175 LSAADLWLFVTTAARYADDVPWRLLRQASDRGTAVAIVLDRVD--------RPAAAEVRT 226
Query: 520 NTMKLLNIENVTIYPV 535
+ +++L + + PV
Sbjct: 227 HLVEMLREQGLETAPV 242
>gi|19705079|ref|NP_602574.1| thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296329340|ref|ZP_06871841.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|24212481|sp|Q8RI59.1|THIE_FUSNN RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|19712999|gb|AAL93873.1| Thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153696|gb|EFG94513.1| thiamine-phosphate diphosphorylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 206
Score = 55.1 bits (131), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKD-RALFLIAERVDIAAA 156
G D I+E++ V IV L S K Y+ A +K + K+ LF+I +R+DI A
Sbjct: 19 GKDFYKCIEESIKGGVKIVQLREKNISTKDFYKKALKVKEICKNYEVLFIINDRLDITQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATARNIEEAEKAQLL-GADYIGSG 130
Query: 215 CCFGEGQK--ADVIE----NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K A +E + +VKIP+F + + +V G G V S+
Sbjct: 131 AIFGTSTKDNAKRLEMEDLKKIVNSVKIPVFAIGGININNVWMLKNIGLQG-VCSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 ----GILSEKDCKKAVEN 200
>gi|427720567|ref|YP_007068561.1| small GTP-binding protein [Calothrix sp. PCC 7507]
gi|427353003|gb|AFY35727.1| small GTP-binding protein [Calothrix sp. PCC 7507]
Length = 450
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ L A++++D + + G + GKSSV+NALLG + L+ G + N +T
Sbjct: 45 ELETLNSALNKLDSNVIKIAAFGLVSRGKSSVLNALLGDKILQTGPL---NGVT------ 95
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVL 467
+ R R G +L E+I DTPG + I + + + E V +ADL+L
Sbjct: 96 ----QWPRSVRWQPG-------DKVLIELI--DTPGLDEIEGEARAEMAREVVLQADLIL 142
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
F++S D +T +E L +Q +K ++ V NK DLY
Sbjct: 143 FIVSGD--ITRTEYQALLQLRQSQKPLILVFNKIDLY 177
>gi|296270523|ref|YP_003653155.1| AAA ATPase [Thermobispora bispora DSM 43833]
gi|296093310|gb|ADG89262.1| AAA ATPase [Thermobispora bispora DSM 43833]
Length = 687
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL--------------RFSDL 409
P L+V+ G +GKS+++N + GKR GV T I L S +
Sbjct: 194 PALIVVAGSTGAGKSTLVNTIAGKRVAVTGVRRPTTSIPVLVCHPDDHDWYARGELLSGV 253
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
E Q+ + PDG I + + + ++DTP + ++++ + + ADL +FV
Sbjct: 254 PKYEGQQADAGPDG-IILASSDQLPRGIALLDTPDIDSVVEQNHEIAHRMLDAADLWMFV 312
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
+A R LR ++ +++ V+++
Sbjct: 313 TTAARYADAPSWGLLRRAKERNARLIIVVSR 343
>gi|434404274|ref|YP_007147159.1| small GTP-binding protein domain protein [Cylindrospermum stagnale
PCC 7417]
gi|428258529|gb|AFZ24479.1| small GTP-binding protein domain protein [Cylindrospermum stagnale
PCC 7417]
Length = 451
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ L ++++D + + + G + GKS+V+NALLG++ L+ G + N +T
Sbjct: 45 EIEALNATLNKLDSNVIRIAVFGLVSRGKSAVLNALLGEKILQTGPL---NGVT------ 95
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVL 467
+ + P G+ + L +DTPG + I + ++ E +ADL+L
Sbjct: 96 ---QWPRSVRWQPGGKVLVEL----------IDTPGLDEIEGDARAQMAREVAQQADLIL 142
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
FV+S D +T +E L +Q +K ++ V NK DLY
Sbjct: 143 FVVSGD--ITRTEYQGLLELRQAQKPLILVFNKIDLY 177
>gi|350567744|ref|ZP_08936152.1| ABC superfamily ATP binding cassette transporter [Propionibacterium
avidum ATCC 25577]
gi|348662507|gb|EGY79170.1| ABC superfamily ATP binding cassette transporter [Propionibacterium
avidum ATCC 25577]
Length = 621
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRVVTRPGVIRPTTTSPVLVHHPDDAVWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + R + D + + P I K + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLVRSRVASN-DASSLQLVAEPGIPKGLAILDAPDIDSVVARNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q+ V V ++
Sbjct: 173 VTSAARYADAVPWDFLNEAQERHASVAVVCDR 204
>gi|283955114|ref|ZP_06372616.1| LOW QUALITY PROTEIN: GTP-binding protein [Campylobacter jejuni
subsp. jejuni 414]
gi|283793327|gb|EFC32094.1| LOW QUALITY PROTEIN: GTP-binding protein [Campylobacter jejuni
subsp. jejuni 414]
Length = 610
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------- 406
L + V +D+ + I+G+++SGKSS++N +LG+ L GVVP T + TFLR+
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 407 ------SDLAS--EE-----QQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
SD+ + EE QR E + P +L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEELPFYTDQRNEIKQAKSLHIFAPVALLEKITLVDTPGLN 163
>gi|154148763|ref|YP_001406424.1| GTP-binding protein [Campylobacter hominis ATCC BAA-381]
gi|153804772|gb|ABS51779.1| GTP-binding protein [Campylobacter hominis ATCC BAA-381]
Length = 601
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 20/121 (16%)
Query: 346 PLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR 405
P M ++L + + +EP + ++G+++SGKS+++N LL L GVVP T ++T+++
Sbjct: 40 PSMRLKAILSEFSALENEPLKIAVIGQFSSGKSTLLNTLLKSEILPTGVVPVTAKVTYIK 99
Query: 406 F--------------------SDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT 445
+ S+L + QR + Y + ILK + +DTPG
Sbjct: 100 YAPHEFLNVIYSDGRSEILGVSELGNFVDQRKDLQKIKSITIYSSNEILKYITFIDTPGL 159
Query: 446 N 446
N
Sbjct: 160 N 160
>gi|152984406|ref|YP_001351369.1| hypothetical protein PSPA7_6053 [Pseudomonas aeruginosa PA7]
gi|150959564|gb|ABR81589.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 570
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 369 IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----LASEEQQRCERHPD-- 422
+VG +++GKSS++NAL+GK L G+ P T T LR+S LA + ER P
Sbjct: 43 VVGAFSAGKSSLLNALMGKDILPVGIAPETELATELRYSSEPYLLAIKPDGEQERLPIDA 102
Query: 423 -----------GQYICYLPSPILKE---MIIVDTPGTNVILQRQQRLTEEFVPRA-DLVL 467
YL S LK +++VD PG L+ + ++PR V+
Sbjct: 103 LGTINRRSSEFSHLRLYLNSEALKALAPLVLVDMPGFGSSLENHNKAIAYYLPRGVHFVV 162
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
D +T+S + L + + F+L+K +L
Sbjct: 163 LTSVEDGNITQSMLRKLDELKTYNTDFTFMLSKCNL 198
>gi|423137897|ref|ZP_17125540.1| thiamine-phosphate pyrophosphorylase [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371958847|gb|EHO76548.1| thiamine-phosphate pyrophosphorylase [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 206
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+EA+ V IV L S K + A +K + K LF+I +R+DIA A
Sbjct: 19 GKDFYKCIEEAIKGGVKIVQLREKTLSTKDFFIKALKIKEICKSYGVLFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATARNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADV----IEN--SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + IE+ + +VKIP+F + + +V G G V S+
Sbjct: 131 AIFGTSTKDNAKKLEIEDLKKIVNSVKIPVFAIGGININNVWMLKNIGLQG-VCSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 ----GILSEKDCKKAVEN 200
>gi|359460836|ref|ZP_09249399.1| GTP-binding domain-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 491
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 18/146 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLASEEQQRCERHPD 422
+ + G + GKSS++NALLG+ GV + + ++ D + EE R
Sbjct: 84 IAVFGMVSRGKSSLLNALLGQSVFATGPVHGVTQQSQQASWFVDQD-SGEEAIRVSLQGV 142
Query: 423 GQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
GQ + ++DTPG + V + ++RL + +ADL+LFVI+ D +T+ E
Sbjct: 143 GQ----------SRIELIDTPGIDEVDGEVRERLARQIAQQADLILFVIAGD--MTKVEF 190
Query: 482 VFLRYTQQWKKKVVFVLNKSDLYQNA 507
L +Q K ++ V NK D Y A
Sbjct: 191 EALSELRQASKPILLVFNKVDQYPEA 216
>gi|381210107|ref|ZP_09917178.1| hypothetical protein LGrbi_09316 [Lentibacillus sp. Grbi]
Length = 1212
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 33/199 (16%)
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKR---YLKDGVVPTTNEI--TFLRFSDLA 410
D + + + +L I+ Y ++++ G+ YL+D T+E FL DL
Sbjct: 718 DQLHKTHQAYLTAILNGYEYSRAAI-----GQERTIYLEDFSAYVTDETIACFLESVDLY 772
Query: 411 SEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI 470
Y C L + + +VDTPG + I R + +++ AD +L+V
Sbjct: 773 --------------YDCSLTR---EGITLVDTPGADSINARHTNVAFDYIKYADAILYVT 815
Query: 471 SADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLL 525
+ + ++ FL + K K+ F++N SDL Q+A EL+ +++E + L
Sbjct: 816 YYNHAFSRADKDFLMQLGRVKDAFHLDKMFFIVNASDLAQDASELQMVQQYIEEQ-LTAL 874
Query: 526 NIENVTIYPVSARSTLEAK 544
I ++PVS++ +LE K
Sbjct: 875 GIRFPRLFPVSSKQSLEEK 893
>gi|298490381|ref|YP_003720558.1| small GTP-binding protein ['Nostoc azollae' 0708]
gi|298232299|gb|ADI63435.1| small GTP-binding protein ['Nostoc azollae' 0708]
Length = 484
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ---RCERHPDG 423
+ + G GKSS++NAL+G+ + G + EQ+ R G
Sbjct: 81 IAVFGMVGRGKSSLLNALVGQAVFETG-----------PLHGVTRAEQKVNWRISEEAIG 129
Query: 424 QYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
LP+ ++ ++DTPG + V + + L E+ +ADL+LFVIS D +T+ E V
Sbjct: 130 TLRVTLPATGQSQVELIDTPGLDEVDGETRAALAEQVAKQADLILFVISGD--MTKIEQV 187
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQNA 507
L ++ K ++ V NK D Y A
Sbjct: 188 ALSQLREVGKPMILVFNKVDQYPEA 212
>gi|392391122|ref|YP_006427725.1| dynamin family protein [Ornithobacterium rhinotracheale DSM 15997]
gi|390522200|gb|AFL97931.1| dynamin family protein [Ornithobacterium rhinotracheale DSM 15997]
Length = 610
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 347 LMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF 406
L+ E++ L + ++Q + + ++GE+++GK+++INAL+ + L+ + PTT+ I + F
Sbjct: 19 LILEINNLENKINQNNAELIFPLIGEFSAGKTTLINALIDNKKLETSITPTTSTIYEIHF 78
Query: 407 SDLASEEQ--------QRCERHPDGQYICYLPSPILK----------EMIIVDTPGTNVI 448
S+ + + E D + +P +K E IIVDTPG +
Sbjct: 79 GSNTSKAEIVLEDGSIKEIENIEDLNNDDLIDTPTIKIFDTSNKIPKETIIVDTPGLSSP 138
Query: 449 LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
Q+ + F+P AD + VI ++P T S + F+ + +K + ++ KSD
Sbjct: 139 TQKHRDNLMNFLPYADGMFLVIDINQPSTRSLMDFISTMKLSEKPIYVIITKSD 192
>gi|387771656|ref|ZP_10127814.1| hypothetical protein HMPREF1050_0285 [Haemophilus parahaemolyticus
HK385]
gi|386908516|gb|EIJ73209.1| hypothetical protein HMPREF1050_0285 [Haemophilus parahaemolyticus
HK385]
Length = 507
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 37/185 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+++ G YN+GKS++IN L GK +P T+++ +R+ G Y
Sbjct: 43 IMLYGAYNAGKSTLINVLSGKEVAPVADIPKTDKV----------------DRYSWGDY- 85
Query: 427 CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
I++DTPG N +Q + +T E + R ++LFVI D + +V +
Sbjct: 86 -----------ILLDTPGVNAPIQHED-VTLEQLSRCSVILFVIR-DGDMDSKDVYDRLF 132
Query: 487 TQQWKKKVVFVL------NKSDLYQNAFELEE-AISFVKENTMKLLNIENVTIYPVSARS 539
K K +F++ N+ D YQ A + + + F + + L + V I P++ R+
Sbjct: 133 DLLRKDKKIFIVLNNQLSNEEDKYQAAQHIRDLLVKFAPNHQVNLDKLGEVEILPMNLRT 192
Query: 540 TLEAK 544
L+ K
Sbjct: 193 ALKGK 197
>gi|345877260|ref|ZP_08829013.1| hypothetical protein Rifp1Sym_aq00230 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225727|gb|EGV52077.1| hypothetical protein Rifp1Sym_aq00230 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 671
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 426 ICYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P +L K + I+DTPG N L + LT +P A VLFV+ AD +T S++
Sbjct: 208 LISFPHELLNKGLTILDTPGLNA-LGTEPELTLNMLPSAQGVLFVLGADTGVTRSDMEIW 266
Query: 485 R-----YTQQWKKKVVFVLNKSDLY----QNAFELEEAISFVKENTMKLLNIENVTIYPV 535
+ + + ++ VLNK D ++ E+EEAI + KLL ++ ++PV
Sbjct: 267 QHHIKGFQSGRQHGLMVVLNKIDTLWDDLRDQHEVEEAIHLQRAEAAKLLGLKERAVFPV 326
Query: 536 SARSTLEAKL 545
SA+ L AK+
Sbjct: 327 SAQKGLLAKI 336
>gi|434397363|ref|YP_007131367.1| small GTP-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428268460|gb|AFZ34401.1| small GTP-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 454
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 33/157 (21%)
Query: 354 LIDAVSQIDEPFLLV-IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF---LRFSDL 409
L A+ ++D+ + + G + GKSSVINALLG+ L+ G P T+ LR++
Sbjct: 52 LKGALDRLDQTVIRISTFGLVSCGKSSVINALLGQEILETG--PIHGVTTWPKSLRWTP- 108
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQ-RLTEEFVPRADLVLF 468
P G+ ++ +DTPG + I Q+ ++ +E R+DL+LF
Sbjct: 109 -----------PSGKV----------QVEFIDTPGLDEIEGEQRTQMAQEVAQRSDLILF 147
Query: 469 VISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
V++ D TE + + LR +Q K ++ V NK DLY
Sbjct: 148 VVAGDITRTEYKALCQLRRSQ---KPLILVFNKVDLY 181
>gi|428317246|ref|YP_007115128.1| GTP-binding protein HSR1-related protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428240926|gb|AFZ06712.1| GTP-binding protein HSR1-related protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 482
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSSV+NALLG+ + G T + D+ + +R+ ++
Sbjct: 75 IAVFGMVGRGKSSVLNALLGQNVFETGPTHGVTRTTTIGQWDVG----EGMDRNLPDRF- 129
Query: 427 CYLPSPI---LKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
SP+ L ++ +VDTPG + V + ++ L +ADL+LFV++ D +T+ E
Sbjct: 130 ----SPVIYRLSQVELVDTPGIDEVDGETRELLARRVAQQADLILFVVAGD--ITKVEYA 183
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIY---PVSARS 539
L ++ K ++ V NK D Y +A L E +LL+ + + + P++AR+
Sbjct: 184 ALSQLREAGKPMLLVFNKIDQYPDADRLAIYHKIRDERVRELLSPDEIVMAAASPLTARA 243
>gi|282854754|ref|ZP_06264089.1| ATP/GTP-binding family protein [Propionibacterium acnes J139]
gi|386069845|ref|YP_005984741.1| putative ABC transporter [Propionibacterium acnes ATCC 11828]
gi|422467129|ref|ZP_16543683.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA4]
gi|422469202|ref|ZP_16545727.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA3]
gi|282582336|gb|EFB87718.1| ATP/GTP-binding family protein [Propionibacterium acnes J139]
gi|314982041|gb|EFT26134.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA3]
gi|315090806|gb|EFT62782.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA4]
gi|353454212|gb|AER04731.1| putative ABC transporter [Propionibacterium acnes ATCC 11828]
Length = 621
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
+ + R + S I + + I+D P + ++ R + L + + ADL +FV
Sbjct: 114 PTLVRSRVASNDASSLQLVAESRIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWIFV 173
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
SA R FL Q+ V V ++
Sbjct: 174 TSAARYADAVPWDFLSEAQERHASVAVVCDR 204
>gi|422458584|ref|ZP_16535235.1| ATP/GTP-binding family protein [Propionibacterium acnes HL050PA2]
gi|315104357|gb|EFT76333.1| ATP/GTP-binding family protein [Propionibacterium acnes HL050PA2]
Length = 621
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
+ + R + S I + + I+D P + ++ R + L + + ADL +FV
Sbjct: 114 PTLVRSRVASNDASSLQLVAESRIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWIFV 173
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
SA R FL Q+ V V ++
Sbjct: 174 TSAARYADAVPWDFLSEAQERHASVAVVCDR 204
>gi|166363285|ref|YP_001655558.1| small GTP-binding protein [Microcystis aeruginosa NIES-843]
gi|166085658|dbj|BAG00366.1| small GTP-binding protein [Microcystis aeruginosa NIES-843]
Length = 454
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A++++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALAKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLATGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L ++ KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRRAKKPIILVFNKIDLYPEA 184
>gi|229004461|ref|ZP_04162203.1| Reticulocyte binding protein [Bacillus mycoides Rock1-4]
gi|228756793|gb|EEM06096.1| Reticulocyte binding protein [Bacillus mycoides Rock1-4]
Length = 1234
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EI 401
EE L ID + Q P SGK + L R ++ G +N ++
Sbjct: 716 FEEALLQIDTILQYPSP----------SGKQKTTFSFL--RAVQKGYQAVSNHLGEQVQV 763
Query: 402 TFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
T FSD + E++ C + + Y C L + + +VDTPG + I R + +++
Sbjct: 764 TLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYI 820
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAIS 515
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE
Sbjct: 821 KNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEDELEMVKG 880
Query: 516 FVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGK 553
++ + ++ I N ++ +S+ LE K S A K
Sbjct: 881 YIADQLLQ-YGIRNPRLFAISSLCALEEKQGKSIAKEK 917
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 57 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGQDRVVVTVKSGEHYE 116
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 117 YDGAYSAEELKQLCKNGDEIIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 176
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 177 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVINQID 217
>gi|158337445|ref|YP_001518620.1| GTP-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158307686|gb|ABW29303.1| GTP-binding domain protein [Acaryochloris marina MBIC11017]
Length = 493
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 18/146 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLASEEQQRCERHPD 422
+ + G + GKSS++NALLG+ GV + + ++ D + EE R
Sbjct: 84 IAVFGMVSRGKSSLLNALLGQAVFATGPVHGVTQQSQQASWFVDQD-SGEEAIRVSLQGV 142
Query: 423 GQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
GQ + ++DTPG + V + ++RL + +ADL+LFVI+ D +T+ E
Sbjct: 143 GQ----------SRIELIDTPGIDEVDGEVRERLARQIAQQADLILFVIAGD--MTKVEF 190
Query: 482 VFLRYTQQWKKKVVFVLNKSDLYQNA 507
L +Q K ++ V NK D Y A
Sbjct: 191 EALSELRQASKPILLVFNKVDQYPEA 216
>gi|228996785|ref|ZP_04156420.1| Reticulocyte binding protein [Bacillus mycoides Rock3-17]
gi|228762962|gb|EEM11874.1| Reticulocyte binding protein [Bacillus mycoides Rock3-17]
Length = 1210
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EI 401
EE L ID + Q P SGK + L R ++ G +N ++
Sbjct: 692 FEEALLQIDTILQYPSP----------SGKQKTTFSFL--RAVQKGYQAVSNHLGEQVQV 739
Query: 402 TFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
T FSD + E++ C + + Y C L + + +VDTPG + I R + +++
Sbjct: 740 TLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYI 796
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAIS 515
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE
Sbjct: 797 KNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEDELEMVKG 856
Query: 516 FVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGK 553
++ + ++ I N ++ +S+ LE K S A K
Sbjct: 857 YIADQLLQ-YGIRNPRLFAISSLCALEEKQGKSIAKEK 893
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGQDRVVVTVKSGEHYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQLCKNGDEIIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVINQID 193
>gi|425464070|ref|ZP_18843392.1| Small GTP-binding protein [Microcystis aeruginosa PCC 9809]
gi|389833995|emb|CCI21020.1| Small GTP-binding protein [Microcystis aeruginosa PCC 9809]
Length = 454
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A++++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALAKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLATGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L ++ KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRRAKKPIILVFNKIDLYPEA 184
>gi|443669972|ref|ZP_21135120.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
gi|443417454|emb|CCQ13455.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
Length = 609
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 27/174 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDG-----VVPT--TNEITF---LRFSDLASE---- 412
+++VG GKS +N+LL G +PT +N +F L +D S+
Sbjct: 52 IIVVGPLKQGKSQFVNSLLNLTVCSVGDDETTAIPTVVSNAESFSAQLVLADPGSDPIRV 111
Query: 413 ------------EQQRCERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEF 459
E R + + +PSP+L + +++VDTPG T
Sbjct: 112 DVPAEEITTVTPESPRAQGREVLRLDIGVPSPLLADGLVLVDTPGVGGHGNPHAAGTLGL 171
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+P AD VL V A R TE E+ FLR Q V ++ K DLY + ++ EA
Sbjct: 172 IPSADAVLVVSDASREFTEPELSFLRQVQGLCPAVAVLITKIDLYPHWRQIVEA 225
>gi|433459290|ref|ZP_20417118.1| hypothetical protein D477_19704 [Arthrobacter crystallopoietes
BAB-32]
gi|432191357|gb|ELK48317.1| hypothetical protein D477_19704 [Arthrobacter crystallopoietes
BAB-32]
Length = 609
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 84/223 (37%), Gaps = 50/223 (22%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI-----TFLRFSDLAS---- 411
+D ++IVGE+ GKS ++NAL+ V P ++I T +R D AS
Sbjct: 35 LDPNVRVIIVGEFKQGKSKLVNALVNA-----PVCPVDDDIATSVPTVVRHGDRASATIM 89
Query: 412 ------------------------------EEQQRCERHPDGQYICYLPSPILKE-MIIV 440
E RH +LP +L + +V
Sbjct: 90 VPRQGSNNDDGEPELERRQVPIEDLAGYVSEHGNPGNRHKLAAAEVFLPRKLLSGGLSLV 149
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
D+PG + T +P AD +L V A + TE E+ FLR + V VL K
Sbjct: 150 DSPGVGGLNSAHSFTTLTALPTADAMLLVSDASQEYTEPEIRFLRQAMRICPNVACVLTK 209
Query: 501 SDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEA 543
+DLY ++ E E V ++PVSA L A
Sbjct: 210 TDLYPQWRQVAELDRAHLEKAAP-----GVGLFPVSAELRLHA 247
>gi|422390248|ref|ZP_16470344.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL103PA1]
gi|327328202|gb|EGE69971.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL103PA1]
Length = 621
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
+ + R + S I + + I+D P + ++ R + L + + ADL +FV
Sbjct: 114 PTLVRSRVASNDASSLQLVAESRIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWIFV 173
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
SA R FL Q+ V V ++
Sbjct: 174 TSAARYADAVPWDFLSEAQERHASVAVVCDR 204
>gi|153955534|ref|YP_001396299.1| thiamine-phosphate pyrophosphorylase [Clostridium kluyveri DSM 555]
gi|219855930|ref|YP_002473052.1| hypothetical protein CKR_2587 [Clostridium kluyveri NBRC 12016]
gi|146348392|gb|EDK34928.1| ThiE2 [Clostridium kluyveri DSM 555]
gi|219569654|dbj|BAH07638.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 203
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 95 VLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDI 153
VL G + +++A+ V +V L +AS + YE A LK + + + +I +R+DI
Sbjct: 15 VLRGKSLYEAVEQAILGGVTLVQLREKDASTREFYEQALELKKITETYNIPLIINDRLDI 74
Query: 154 AAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADF- 212
A AV+A GV L +P + ARN + + ++G +V ++ A A + GAD+
Sbjct: 75 AQAVDAEGVHLGQSDMPLVAARNILGKN-------KIIGISVGNVEEALEAEKN-GADYV 126
Query: 213 -LVCCFGEGQKADV-----IE--NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
+ F G K D+ IE S++ ++ IP + + + L +G G +
Sbjct: 127 GIGTIFFTGTKKDIDIPIGIEGLKSVYNSINIPAVAIGGINENNFREVLSTGIDGISV 184
>gi|422462851|ref|ZP_16539470.1| ATP/GTP-binding family protein [Propionibacterium acnes HL060PA1]
gi|422565253|ref|ZP_16640902.1| ATP/GTP-binding family protein [Propionibacterium acnes HL082PA2]
gi|314966129|gb|EFT10228.1| ATP/GTP-binding family protein [Propionibacterium acnes HL082PA2]
gi|315095020|gb|EFT66996.1| ATP/GTP-binding family protein [Propionibacterium acnes HL060PA1]
Length = 621
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
+ + R + S I + + I+D P + ++ R + L + + ADL +FV
Sbjct: 114 PTLVRSRVASNDASSLQLVAESRIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWIFV 173
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
SA R FL Q+ V V ++
Sbjct: 174 TSAARYADAVPWDFLSEAQERHASVAVVCDR 204
>gi|94309239|ref|YP_582449.1| putative GTPase [Cupriavidus metallidurans CH34]
gi|93353091|gb|ABF07180.1| Putative GTPase [Cupriavidus metallidurans CH34]
Length = 672
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 223 VINFPHPLLRQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLDLW 281
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK----ENTMKLLNIENVTIYPVSAR 538
R ++ + VLNK D + + I+ T + L IE +YPVSA+
Sbjct: 282 RSHVGAGHRRGCLAVLNKIDGLWDPLKSSSEIASEISRQVRTTAQTLGIEERRVYPVSAQ 341
Query: 539 STLEAKLS 546
L AK++
Sbjct: 342 KGLVAKVT 349
>gi|222823374|ref|YP_002574948.1| ATP/GTP-binding protein [Campylobacter lari RM2100]
gi|222538596|gb|ACM63697.1| conserved hypothetical protein, predicted ATP/GTP-binding protein
[Campylobacter lari RM2100]
Length = 605
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 20/100 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------------------- 407
+ I+G+++SGKS+++N +L K L GVVP T + TFLR++
Sbjct: 64 VAIIGQFSSGKSTLLNLILQKECLPTGVVPVTFKPTFLRYAKEYFLRVEYEDGSDEIVDI 123
Query: 408 -DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
+L+ QR E + P +LK++ ++DTPG N
Sbjct: 124 NELSKFSDQRNELKETKSLHLFAPIELLKDITLIDTPGLN 163
>gi|430809769|ref|ZP_19436884.1| putative GTPase [Cupriavidus sp. HMR-1]
gi|429497793|gb|EKZ96316.1| putative GTPase [Cupriavidus sp. HMR-1]
Length = 647
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++I+DTPG N I + LT +P A +V+FV++AD +T+S++
Sbjct: 198 VINFPHPLLRQGLVILDTPGLNAI-GTEPELTLRLIPDAHVVVFVLAADAGVTKSDLDLW 256
Query: 485 R--YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK----ENTMKLLNIENVTIYPVSAR 538
R ++ + VLNK D + + I+ T + L IE +YPVSA+
Sbjct: 257 RSHVGAGHRRGCLAVLNKIDGLWDPLKSSSEIASEISRQVRTTAQTLGIEERRVYPVSAQ 316
Query: 539 STLEAKLS 546
L AK++
Sbjct: 317 KGLVAKVT 324
>gi|357419023|ref|YP_004932015.1| thiamine-phosphate diphosphorylase [Thermovirga lienii DSM 17291]
gi|355396489|gb|AER65918.1| thiamine-phosphate diphosphorylase [Thermovirga lienii DSM 17291]
Length = 212
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 96 LAGGDALDLIDEAVAKFVG---IVVLNGGEASGKSVYEAACLLKSVVKDR-ALFLIAERV 151
L+ G L L ++A A G + L +A+ K +Y A + + + ALF++ +R+
Sbjct: 16 LSSGRGLPLEEQAKAALEGGATAIQLRCKDATSKELYRYALAFRHLADEYGALFIVNDRL 75
Query: 152 DIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGAD 211
DIA A A GV L LP VAR + ++G +T A A EGA
Sbjct: 76 DIALAAKADGVHLGKDDLPVRVARELAPEGF-------IIGATARTPQRAIEA-QKEGAS 127
Query: 212 FL--VCCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVIS 263
+L + K D + N++ V IP + + DV + +K+GA G +S
Sbjct: 128 YLGVGAIYPTKTKKDTVVIGLDGLNNIVEKVSIPCVAIGGITIKDVKEVIKTGACGVAVS 187
>gi|344212879|ref|YP_004797199.1| thiamine-phosphate pyrophosphorylase [Haloarcula hispanica ATCC
33960]
gi|343784234|gb|AEM58211.1| thiamine-phosphate pyrophosphorylase [Haloarcula hispanica ATCC
33960]
Length = 211
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG D++ +A+ VG+V L + + + YE L+++ ++ + F++ +RVDIA
Sbjct: 16 AGRTTADIVADAIDGGVGVVQLREKDRTARERYELGRELRALTREAGVTFVVNDRVDIAQ 75
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV- 214
A++A GV L D LP VAR + + L+GR+V T+ A A+++ V
Sbjct: 76 ALDADGVHLGDDDLPVPVARELLGED-------ALIGRSVSTVADAEAAAAAGADYLGVG 128
Query: 215 CCFGEGQKADVIEN----------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISL 264
F G K D+ ++ ++ V IP + + ++ +++GA G +
Sbjct: 129 AVFATGSKDDIDDDEYAIGTDRVAAIADAVDIPFVGIGGITTENATEVVEAGADGVAVIT 188
Query: 265 E 265
E
Sbjct: 189 E 189
>gi|340354741|ref|ZP_08677442.1| dynamin family protein [Sporosarcina newyorkensis 2681]
gi|339623140|gb|EGQ27646.1| dynamin family protein [Sporosarcina newyorkensis 2681]
Length = 1197
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 351 VSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLA 410
+S L +A ++ D+ + E S I A + + TT + F+
Sbjct: 695 ISTLEEAFAKTDDALKQPLENENLHIHKSFIQAFKKGYPVYTSALGTTLTVEREEFTKFV 754
Query: 411 SEEQQRC-ERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
++E++ C D Y C P+ + I +VDTPG + I R + E++ AD +LF
Sbjct: 755 AQEERSCFVESIDFFYDC----PLTRHGITLVDTPGADSINARHTDVAFEYIRNADAILF 810
Query: 469 VISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMK 523
V + ++ FL + K K+ F++N DL N E EE FV N ++
Sbjct: 811 VTYYNHAFARADREFLIQLGRVKDAFELDKMFFIVNAIDLASNEEESEEVKGFVA-NELQ 869
Query: 524 LLNIENVTIYPVSARSTLEAKLS 546
I N ++ +S+ LE KL+
Sbjct: 870 KFGIRNPRVHGISSLEALEGKLN 892
>gi|271967246|ref|YP_003341442.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270510421|gb|ACZ88699.1| hypothetical protein Sros_5964 [Streptosporangium roseum DSM 43021]
Length = 641
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 48/266 (18%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYL----------------------------KDG 393
DE +V+ G GKS ++N L+G L DG
Sbjct: 45 DECTDIVVAGAQKRGKSRLLNTLVGHPDLLPVDADVATNCFLSLRRGPALTAVVHRSTDG 104
Query: 394 VVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQ 453
P IT D AS +R L +P+L + ++DTPG + + +
Sbjct: 105 G-PVQTPITVESIPDYASMRGDAGKRRDVVSVDITLDAPLLDGLRLLDTPGVDSLTVGHR 163
Query: 454 RLTEEFVPRADLVLFVISA-DRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEE 512
++T + RAD +LF +SA D+P+ E+ FL + + + FVL K + N L+E
Sbjct: 164 QVTVAMLQRADALLFTLSAQDQPVLRHELEFLAEAAERVQAIAFVLTKVEDSANWQSLQE 223
Query: 513 AISFVKENTMKLLNIENVTIYPVSARST-----LEA-------KLSVSSAVGKDHSELSV 560
EN +L + AR+ LEA KL+ ++ +
Sbjct: 224 ------ENKARLRTFVTQAVAENPARAATLGPLLEAPWIPVSSKLAEAAEAKRREGRRER 277
Query: 561 NDSHWRINTFDKLEKLLYSFLDGSSS 586
D+ + D LE+ L F +G S
Sbjct: 278 ADTLRARSGMDVLERHLRGFAEGRES 303
>gi|228990688|ref|ZP_04150653.1| Reticulocyte binding protein [Bacillus pseudomycoides DSM 12442]
gi|228769214|gb|EEM17812.1| Reticulocyte binding protein [Bacillus pseudomycoides DSM 12442]
Length = 1234
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EI 401
EE L ID + Q P SGK + L R ++ G +N ++
Sbjct: 716 FEEALLQIDTILQYPSP----------SGKQKTTFSFL--RAVQRGYQAVSNHLGEQVQV 763
Query: 402 TFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
T FSD + E++ C + + Y C L + + +VDTPG + I R + +++
Sbjct: 764 TLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYI 820
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAIS 515
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE
Sbjct: 821 KNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEDELEMVKG 880
Query: 516 FVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGK 553
++ + ++ I N ++ +S+ LE K S A K
Sbjct: 881 YIADQLLQ-YGIRNPRLFAISSLCALEEKQGKSIAKEK 917
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 57 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGQDRVVVTVKSGEHYE 116
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 117 YDGAYSAEELKQLCKNGDEIIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 176
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 177 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVINQID 217
>gi|428215734|ref|YP_007088878.1| small GTP-binding protein domain-containing protein [Oscillatoria
acuminata PCC 6304]
gi|428004115|gb|AFY84958.1| small GTP-binding protein domain protein [Oscillatoria acuminata
PCC 6304]
Length = 510
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 26/172 (15%)
Query: 346 PLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLK----DGVVPTTNEI 401
P +E +S ++D + + + + G GKSS++NALLG+ + GV T+ +
Sbjct: 75 PEIEGLSTMLDKLERT--VVQIAVFGMVGRGKSSILNALLGQNVFETGPIHGVTRTSQGV 132
Query: 402 TFLRFSDLASEEQQRCERHP----DGQYICYLPSPILKEMI-IVDTPGTN-VILQRQQRL 455
+ R ER P +G S I + I ++DTPG + V Q ++ L
Sbjct: 133 NW------------RVERSPLDGGEGNITQLTLSGIGQSQIELIDTPGIDEVDGQTREVL 180
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
++ RADL+LF ++ D +T+ E L + K ++ + NK D Y A
Sbjct: 181 AQQVASRADLILFAVAGD--MTQVEYEALSQLRDAGKPMLLIFNKIDQYPEA 230
>gi|345864316|ref|ZP_08816518.1| hypothetical protein TevJSym_am00160 [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124512|gb|EGW54390.1| hypothetical protein TevJSym_am00160 [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 659
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 426 ICYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P +L K + I+DTPG N L + LT +P A VLFV+ AD +T S++
Sbjct: 196 LISFPHELLNKGLTILDTPGLNA-LGTEPELTLNMLPSAQGVLFVLGADTGVTRSDMEIW 254
Query: 485 R-----YTQQWKKKVVFVLNKSDLY----QNAFELEEAISFVKENTMKLLNIENVTIYPV 535
+ + + ++ VLNK D ++ E+EEAI + KLL ++ ++PV
Sbjct: 255 QHHIKGFQSGRQHGLMVVLNKIDTLWDDLRDQHEVEEAIHLQRAEAAKLLGLKERAVFPV 314
Query: 536 SARSTLEAKL 545
SA+ L AK+
Sbjct: 315 SAQKGLLAKI 324
>gi|162451895|ref|YP_001614262.1| hypothetical protein sce3622 [Sorangium cellulosum So ce56]
gi|161162477|emb|CAN93782.1| hypothetical protein sce3622 [Sorangium cellulosum So ce56]
Length = 901
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------LASEEQQ 415
+ P +VGE+N+GKS+ +NALLG+ GV+PTT + ++ ++ + Q
Sbjct: 449 ERPLRAAVVGEFNAGKSTFLNALLGEDVAPTGVLPTTATLHWVAWAPDPFARIVVRGGQD 508
Query: 416 RCERHPD---------------GQYICYLPSPILKEMIIVDTPGTNV-----ILQRQQRL 455
R H + Y P LK + I+DTPG N I + ++
Sbjct: 509 RVVPHAALKDTLRALAAAGDKVARVFIYAPIERLKRVEILDTPGFNAPDPDHIAEARRAF 568
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD-LYQNAFELEEAI 514
E V ++++ A + + ESE L V + NK+D L +A LE +
Sbjct: 569 DEAHV-----AIWLLDAPQAMKESERRVLSEISALGVPVQILANKADRLKPDA--LETVL 621
Query: 515 SFVKENTMKLLNIENVTIYPV--SARSTLEAKLS 546
+ V+ +++ I ++T P+ SAR +L+ +L
Sbjct: 622 AHVR-DSLAASAIASLT-PPIAFSARLSLKGRLG 653
>gi|260495511|ref|ZP_05815636.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 3_1_33]
gi|260196853|gb|EEW94375.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 3_1_33]
Length = 206
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G + I+E++ V IV L S K YE A +K + K+ LF+I +R+DI A
Sbjct: 19 GKNFYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDITQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATARNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + + +VKIP+F + + +V G G + S+
Sbjct: 131 AIFGTSTKDNAKKLEMEDLKKIVNSVKIPVFAIGGININNVWMLKNIGLQG-ICSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 ----GILSEKDCKKAVEN 200
>gi|434400913|ref|YP_007134917.1| GTP-binding protein HSR1-related protein [Stanieria cyanosphaera
PCC 7437]
gi|428272010|gb|AFZ37951.1| GTP-binding protein HSR1-related protein [Stanieria cyanosphaera
PCC 7437]
Length = 533
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 360 QIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCER 419
Q+++P + IVG+ +GKS+ INALLG+ + G V T + +LR+ + +S + ++
Sbjct: 41 QLEQPMRVAIVGKIKAGKSTAINALLGEALVVTGTVEATFNVNWLRYGEKSSLKVHFKDK 100
Query: 420 HP------------------DGQYI-------CYLPSPILKEMIIVDTPGTNVILQRQQR 454
P QY+ + P+PIL+ ++DTPG Q
Sbjct: 101 RPPETKSISELADLTKRSDRSHQYLLNIAYIEVFYPNPILQTFNLIDTPGLESYYQDDSE 160
Query: 455 LTEEFV 460
T +F+
Sbjct: 161 NTRQFL 166
>gi|423663449|ref|ZP_17638618.1| hypothetical protein IKM_03846 [Bacillus cereus VDM022]
gi|401295349|gb|EJS00973.1| hypothetical protein IKM_03846 [Bacillus cereus VDM022]
Length = 1219
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE I + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDIKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|354565748|ref|ZP_08984922.1| small GTP-binding protein [Fischerella sp. JSC-11]
gi|353548621|gb|EHC18066.1| small GTP-binding protein [Fischerella sp. JSC-11]
Length = 521
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK-DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+V+ G ++GK+S++NA+LG+ + D + TT G+
Sbjct: 134 VVVFGTGSAGKTSLVNAILGRMVGRVDAPMGTTTA----------------------GET 171
Query: 426 ICYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
C + ++++I DTPG + +++L E ADL+LFV+ D L SE
Sbjct: 172 YCMRLRGLERKILITDTPGILEAGIAGTEREQLARELATSADLLLFVV--DNDLRRSEYE 229
Query: 483 FLRYTQQWKKKVVFVLNKSDLY 504
LR + K+ + VLNK+DLY
Sbjct: 230 PLRALAEIGKRSLLVLNKTDLY 251
>gi|444304884|ref|ZP_21140673.1| hypothetical protein G205_03461 [Arthrobacter sp. SJCon]
gi|443482854|gb|ELT45760.1| hypothetical protein G205_03461 [Arthrobacter sp. SJCon]
Length = 648
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 135/334 (40%), Gaps = 70/334 (20%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI-----TFLRFSDLASE---- 412
D +++VGE+ GKS +INAL+ P ++I T +R+ D AS
Sbjct: 50 DPSIRVIVVGEFKQGKSKLINALVNA-----PACPVDDDIATSVPTVVRYGDPASASILV 104
Query: 413 --------EQQRCERHPD----------------------GQYICYLPSPILKE-MIIVD 441
++ ER P +C LP IL + ++D
Sbjct: 105 PKADNDGADEASMERQPIPLADLPAYVSEQGNPGNSKKLVAAEVC-LPRKILTGGLTVID 163
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKS 501
+PG + T +P AD +L V A + TE E+ FLR + VV VL+K+
Sbjct: 164 SPGVGGMGSSHTLTTLTALPTADAMLLVSDASQEYTEPELRFLRQAMRITPSVVGVLSKT 223
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIE-NVTIYPVSARSTLEAKLSVSSAVGKDHSELSV 560
DLY + +EE + L + ++ ++PVS+ LEA S + + S V
Sbjct: 224 DLYPDWRRVEET------DRAHLARVAPDIPLFPVSSDLRLEAARLQDSELNTE-SGFPV 276
Query: 561 NDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLE-----------TPIRIAERLLSS 609
+H R K ++L + + E +RL L+ TP IAE L+
Sbjct: 277 LITHLRNEIVGKAQRLQRRSVSQDLLSVTENLRLSLQSELEALENPEGTPRMIAELELAR 336
Query: 610 CETLVMKDCQDAKQDLTLANEMIDSLKEYVMKME 643
E ++ + A+ +TL D + + + ME
Sbjct: 337 TEADELRK-RSARWQITLN----DGISDLIADME 365
>gi|186685335|ref|YP_001868531.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
gi|186467787|gb|ACC83588.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 448
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 28/164 (17%)
Query: 344 ASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT 402
A L E+ L ++++D + + G + GKS+V+NALLG + L+ G + N +T
Sbjct: 39 AGLLKPELEALNSTLNKLDSNVIRIAAFGLVSRGKSAVLNALLGDKILQTGPL---NGVT 95
Query: 403 FLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVP 461
+ + P G+ + L +DTPG + I + + + E V
Sbjct: 96 ---------QWPRSVRWQPGGKVLVEL----------IDTPGLDEIEGESRADMAREVVH 136
Query: 462 RADLVLFVISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D TE + + LR +Q K ++ V NK DLY
Sbjct: 137 QADLILFVVSGDITRTEYQALLELRRSQ---KPLILVFNKIDLY 177
>gi|395006691|ref|ZP_10390495.1| sulfate adenyltransferase subunit 1-like GTPase [Acidovorax sp.
CF316]
gi|394315257|gb|EJE52068.1| sulfate adenyltransferase subunit 1-like GTPase [Acidovorax sp.
CF316]
Length = 657
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I +P P+LK+ ++I+DTPG N + + LT +P+A V+F++SAD +T S++
Sbjct: 196 IINIPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFILSADTGVTRSDLSIW 254
Query: 485 R----YTQQWKKKVVFVLNKSDLYQNAFELEEAI--SFVKE-NT-MKLLNIENVTIYPVS 536
R + + + VLNK D ++ E I V++ NT ++L + + PVS
Sbjct: 255 REHLATSAESLDGRLVVLNKIDTLWDSLNSAEQIQAQMVRQVNTAAEMLGVSPDKVVPVS 314
Query: 537 ARSTLEAKLS 546
A+ L AK+S
Sbjct: 315 AQKGLVAKIS 324
>gi|372487709|ref|YP_005027274.1| dynamin family protein [Dechlorosoma suillum PS]
gi|359354262|gb|AEV25433.1| dynamin family protein [Dechlorosoma suillum PS]
Length = 651
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ P P+L++ ++I+DTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 196 VINFPHPLLQQGLVILDTPGLNAI-GAEPELTLSLLPNAHAVLFILAADTGVTQSDLAIW 254
Query: 485 R----YTQQWKKKVVFVLNKSD-LY---QNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
+ K+ + VLNK D L+ ++ E++ I+ ++ +L + ++PVS
Sbjct: 255 KDNIGAGGNRKRGRLAVLNKIDGLWDELKSEAEIQAEIARQADSCASILGLPQEQVFPVS 314
Query: 537 ARSTLEAKLSVSSAV 551
A+ L AK++ A+
Sbjct: 315 AQKALVAKINGDDAL 329
>gi|404213631|ref|YP_006667825.1| putative GTPases (dynamin-related) [Gordonia sp. KTR9]
gi|403644430|gb|AFR47670.1| putative GTPases (dynamin-related) [Gordonia sp. KTR9]
Length = 484
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 178/446 (39%), Gaps = 82/446 (18%)
Query: 326 LIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALL 385
L+E +V ++ + PL + + L +Q+ EP + +VG +SGKS+++NAL+
Sbjct: 20 LVEQRMTVRGRVEQLLDEVGPLSPDPAGLHALRAQLAEPLTVALVGRVSSGKSTLLNALV 79
Query: 386 GKRYLKDGVVPTTNEITFLRFSDLASE-EQQRCE---------------RHPDGQ----- 424
G R V T+ R + L +E QR E R G+
Sbjct: 80 GDR------VAPTDRAECTRVAALYTEGNPQRVEVIGLDGTVTELPGPMRGDLGRPAEEI 133
Query: 425 --YICYLPSPILKEMI-IVDTPG-----------TNVILQRQQRLTEEFVPRADLVLFVI 470
+ + PS +L+E ++DTPG T + RQ RL R D++LF++
Sbjct: 134 DHAVVHTPSRLLRERFRVIDTPGLSGFTDTAEIATRRVFGRQGRLA-----RPDVILFLL 188
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENV 530
EV FL + + V++++DL + +A + + I
Sbjct: 189 DDAAGPKADEVAFLADAGASAQNTILVISQADLIAADNPMLKAQEIARRVWRRFPAIAGA 248
Query: 531 TIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKE 590
+ A S L A+ V ++ +++S R + E L + LDG
Sbjct: 249 VV----AVSGLMAEAGVCGVTERETAQIS------RRGQLESWE--LLTILDGG------ 290
Query: 591 RMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLKEYVMK---MESESI 647
+ P I L E LV DA + +A + + E++ + ++ +
Sbjct: 291 -----MPAPPGIDVDELGRLEQLVGTYAMDAGGE--IARQGARAYCEWLHRVSGIDELRL 343
Query: 648 SWRRKTLSLIDSTKSRVV--KLIESTLQISNLDIVASYVFRGEKSAAMPSTSRIQHDIIG 705
+ R+ L++ D K+R V L ES + + D + E S P+ R++
Sbjct: 344 AIGRRFLAVGDILKARTVLAALRESAYRSARRDAFLEAIDEAETS---PALHRLREVTAL 400
Query: 706 PALLDTQ---KLLGEYTMWLQSKNAR 728
AL Q +L+GE + + S++ R
Sbjct: 401 EALARWQPDSELVGELNLVVASRDVR 426
>gi|419643644|ref|ZP_14175349.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|380620618|gb|EIB39489.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni ATCC 33560]
Length = 609
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +L L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|428300269|ref|YP_007138575.1| small GTP-binding protein [Calothrix sp. PCC 6303]
gi|428236813|gb|AFZ02603.1| small GTP-binding protein [Calothrix sp. PCC 6303]
Length = 482
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
G GKSS++NAL+GK+ + G + ++ + E ++ R P
Sbjct: 88 GMVGRGKSSLLNALVGKKVFETGALHGVTQVA--QSVSWVISETEKISR-------VTFP 138
Query: 431 SPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
+M ++DTPG + V + + L E +ADL+LFVIS D +T+ E L ++
Sbjct: 139 GLGKSQMELIDTPGLDEVDGETRAELAEHIAKQADLILFVISGD--MTKLEFEALSQLRE 196
Query: 490 WKKKVVFVLNKSDLYQNA 507
K ++ V NK D Y A
Sbjct: 197 VGKPILLVFNKVDQYPEA 214
>gi|425449086|ref|ZP_18828929.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
7941]
gi|389764544|emb|CCI09248.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
7941]
Length = 454
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLTTGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + ++P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWIPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L + KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRGAKKPIILVFNKIDLYPEA 184
>gi|334118351|ref|ZP_08492440.1| small GTP-binding protein [Microcoleus vaginatus FGP-2]
gi|333459358|gb|EGK87971.1| small GTP-binding protein [Microcoleus vaginatus FGP-2]
Length = 547
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S +NAL+G+ + G T E+ G+
Sbjct: 133 VVVFGTGSAGKTSAVNALVGRMAGQVGAPMGTTEV---------------------GETY 171
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
I +E+ I DTPG V ++ L + RADL+LFV+ D L +SE
Sbjct: 172 TLKLKGIDRELAITDTPGILEAGVAGTYREELARQLAARADLILFVLDGD--LRKSEYEP 229
Query: 484 LRYTQQWKKKVVFVLNKSDLY 504
LR + K+ + V NK DLY
Sbjct: 230 LRTLAEIGKRSIVVFNKVDLY 250
>gi|186684445|ref|YP_001867641.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
gi|186466897|gb|ACC82698.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 493
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 371 GEYNSGKSSVINALLGKRYLKDG---VVPTTNEITFLRFSDLASEEQQRCERHPDGQYIC 427
G GKSS++N+L+G+ + G V T + S+ A E +R R
Sbjct: 94 GMVGRGKSSLLNSLVGQTVFETGPLHGVTRTAQTVNWSISEEAIGETERALR-------V 146
Query: 428 YLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
LP ++ ++DTPG + V + L E+ +ADL+LFVIS D +T+ E L
Sbjct: 147 TLPGVGQSQVKLIDTPGLDEVDGATRAVLAEQIAKQADLILFVISGD--MTKLEYAALSQ 204
Query: 487 TQQWKKKVVFVLNKSDLYQNA 507
++ K ++ V NK D Y A
Sbjct: 205 LREAGKPIILVFNKVDQYPEA 225
>gi|428309443|ref|YP_007120420.1| small GTP-binding protein domain-containing protein [Microcoleus
sp. PCC 7113]
gi|428251055|gb|AFZ17014.1| small GTP-binding protein domain protein [Microcoleus sp. PCC 7113]
Length = 516
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 28/142 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+V+ G ++GK+S++NAL+G+ K G + TT E G+
Sbjct: 132 VVVFGTGSAGKTSLVNALIGRMVGKVGAPMGTTGE----------------------GET 169
Query: 426 ICYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ ++++I DTPG V+ ++++L E A+L+LFV+ D L +SE
Sbjct: 170 YSLKLKGLERQILITDTPGILEAGVVGTQREQLARELATEANLLLFVVDND--LRQSEYE 227
Query: 483 FLRYTQQWKKKVVFVLNKSDLY 504
LR + K+ + V NK+DLY
Sbjct: 228 PLRRLAEIGKRSILVFNKTDLY 249
>gi|419689065|ref|ZP_14217371.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1854]
gi|380664039|gb|EIB79654.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1854]
Length = 609
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 20/113 (17%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS------ 407
L + V +D+ + I+G+++SGKSS++N +L L GVVP T + TFLR++
Sbjct: 51 LKELVFSLDKNVNIAIIGQFSSGKSSLLNLILRCDCLPTGVVPVTFKPTFLRYAKEYFLR 110
Query: 408 --------------DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
LA QR E + P P+L+++ +VDTPG N
Sbjct: 111 VEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN 163
>gi|67921830|ref|ZP_00515347.1| Small GTP-binding protein domain [Crocosphaera watsonii WH 8501]
gi|67856422|gb|EAM51664.1| Small GTP-binding protein domain [Crocosphaera watsonii WH 8501]
Length = 447
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 24/135 (17%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
G + GKS+VINAL+G+ L+ G + + P Q +C+ P
Sbjct: 66 GLVSRGKSAVINALIGQNILESGPI-------------------HGVTKWP--QSVCWTP 104
Query: 431 SPILKEMIIVDTPGTNVILQRQQR-LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
++ +DTPG + I R++ ++ ADL+LFVIS D +T SE L ++
Sbjct: 105 PNGEVKVEFIDTPGLDEIDGREREIMSRNIADEADLILFVISED--ITRSEYEALLDLKK 162
Query: 490 WKKKVVFVLNKSDLY 504
K ++ V NK DLY
Sbjct: 163 ALKPIILVFNKIDLY 177
>gi|254414378|ref|ZP_05028145.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196179053|gb|EDX74050.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 695
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F L+++G+ GKS+ +NAL+G++ L V P T +T LR+
Sbjct: 70 FRLLVLGDLKRGKSTFLNALIGEKLLPADVNPCTALLTVLRYGTQKKVTVYFKGDKPPES 129
Query: 408 -DLAS---------EEQQRCERH-----PDGQY-ICYLPSPILKEMI-IVDTPGTNVILQ 450
D AS E +R E PD Y + P P+L++ I IVD+PG N
Sbjct: 130 LDFASFKQNYTIDPTEAKRLEAENSSAFPDVDYAVVEYPLPLLEKGIEIVDSPGLNDTET 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSD 502
R + L+ ++ +LFV A +P T E +L Y + V F++N D
Sbjct: 190 RNE-LSLNYIHNCHAILFVFRAMQPCTLEERRYLENYIKGRGLTVFFLINAWD 241
>gi|375097430|ref|ZP_09743695.1| thiamine-phosphate pyrophosphorylase [Saccharomonospora marina
XMU15]
gi|374658163|gb|EHR52996.1| thiamine-phosphate pyrophosphorylase [Saccharomonospora marina
XMU15]
Length = 225
Score = 53.9 bits (128), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 99 GDALDLIDEAVAKFVGIVVL----NGGEASGKSVYEAACLLKSVVKDRALFLIAERVDIA 154
GD + D A+A V I+ L +G +G+ + L ++ K AL + +R DIA
Sbjct: 29 GDLAEFADAALAGGVDIIQLRDKNDGTLEAGEEIEALEVLARACAKHGALLSVNDRADIA 88
Query: 155 AAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV 214
AV A + L LP VAR + D P++GR+ +L+ A A++ +G D+
Sbjct: 89 LAVQADVLHLGQDDLPVSVARRILGDD-------PVIGRSTHSLEEARLAATEDGVDYF- 140
Query: 215 CCFG 218
C G
Sbjct: 141 -CVG 143
>gi|421145569|ref|ZP_15605430.1| thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488029|gb|EJG08923.1| thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 206
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G + I+E++ V IV L S K YE A +K + K+ LF+I +R+DI A
Sbjct: 19 GKNFYKCIEESIKGGVKIVQLREKNISTKDFYEKALKVKEICKNYGVLFIINDRLDITQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATARNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + + +VKIP+F + + +V G G + S+
Sbjct: 131 AIFGTSTKDNAKKLEMEDLKKIVNSVKIPVFAIGGININNVWILKNIGLQG-ICSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 ----GILSEKDCKKAVEN 200
>gi|194364150|ref|YP_002026760.1| hypothetical protein Smal_0372 [Stenotrophomonas maltophilia
R551-3]
gi|194346954|gb|ACF50077.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
Length = 587
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 42/211 (19%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
L+ I+G +++GKSS+IN LG L G+ P T T LRFS R + D
Sbjct: 41 LLVPIIGAFSAGKSSLINTFLGADILPVGITPETELATELRFSRDPHVLAHRADGGSDRL 100
Query: 425 YI-----------------CYLPSPILKEM---IIVDTPGTNVILQRQQRLTEEFVPR-A 463
+ +L P L+ + ++VD PG L + ++PR A
Sbjct: 101 AVEDLLSIKPRASSYTHLELHLDDPRLEALYPQVLVDMPGFGSSLDSHNKAIAHYLPRGA 160
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMK 523
++ V D L ES + L ++ +L+K++L
Sbjct: 161 HFIVAVSVPDGTLAESTLRQLETMHTYEAGFSILLSKANLR------------------- 201
Query: 524 LLNIENVTIYPVSARSTLEAKLSVSSAVGKD 554
+ E V V+ R LE +L V+ A+ +D
Sbjct: 202 --SAEEVDAVEVAVREQLELRLGVAPAMARD 230
>gi|385804026|ref|YP_005840426.1| thiamine-phosphate synthase [Haloquadratum walsbyi C23]
gi|339729518|emb|CCC40781.1| thiamine-phosphate synthase [Haloquadratum walsbyi C23]
Length = 223
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG ++++ A+ + IV L E + + YE +++ + FL+ +RVD+AA
Sbjct: 17 AGRSTTEIVEAAIDGGIDIVQLREKETTARRRYEIGQTVRTQTAQAGVTFLVNDRVDLAA 76
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
AVNA GV L D LP AR + ++GR+V T AA A GAD+L
Sbjct: 77 AVNADGVHLGDDDLPVTAAREVLGQD-------AIIGRSVSTPAAAQRAEDI-GADYLGV 128
Query: 214 VCCFGEGQKADVIEN---------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
+ G K E+ ++ V IP+ + + ++ +++GA G +
Sbjct: 129 GAVYPTGTKDVTAESAEIGPKTVTAITDAVSIPVIGIGGITPSNTTEVIRAGADGVAV 186
>gi|254422124|ref|ZP_05035842.1| Dynamin family protein [Synechococcus sp. PCC 7335]
gi|196189613|gb|EDX84577.1| Dynamin family protein [Synechococcus sp. PCC 7335]
Length = 776
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 127/297 (42%), Gaps = 75/297 (25%)
Query: 310 KERVAGFVKFEDREKQL--IETERSVLLE---AIDVIKKASPLMEEVSLLIDAVSQIDEP 364
K A KF+ ++QL I T+ LL+ A D+ S L +EV L V +
Sbjct: 135 KPSYAKLKKFQGYQEQLSQIYTDLVQLLQVKGAYDIF--PSVLKDEVRSLAQKVQ--SQK 190
Query: 365 FLLVIVGEYNSGKSSVINALLGKR--------------------------YLKDGVVPTT 398
F L +VGE++ GKS+ +NALLG+ Y KDG T
Sbjct: 191 FRLAVVGEFSQGKSTFLNALLGEELQPVRAIPCSGALTVLKYGPVKRVVCYYKDG---TQ 247
Query: 399 NEITFLRFSDLAS--EEQQRCER---------------HPDGQYICYLPSPILKEMIIVD 441
+EI F ++ AS EE R HPD + +C ++ IVD
Sbjct: 248 SEIPFDQYQQQASIPEEAALGNRELKLAESNIDEIVLEHPDLE-LCR------HQVEIVD 300
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKK--------K 493
+PG N R +TE + D +F+ +A RP+T+ E L+ + +
Sbjct: 301 SPGLNEHPDRT-AVTERLLQDTDAAIFLANAQRPMTKGERDLLKGLKHRLQIEDSGAPAS 359
Query: 494 VVFVL-NKSDLYQNAFELEEAISFVK---ENTMKLLNIENVTIYPVSARSTLEAKLS 546
+FVL N DL ++ + + + VK N L E+ ++ VSARS LEA L+
Sbjct: 360 NLFVLVNFMDLLRSPEDKAQVQTLVKNVVHNPADPLVSEDNRVHFVSARSALEATLT 416
>gi|110668561|ref|YP_658372.1| thiamine-phosphate pyrophosphorylase [Haloquadratum walsbyi DSM
16790]
gi|121687215|sp|Q18GX9.1|THIE_HALWD RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|109626308|emb|CAJ52766.1| thiamine-phosphate synthase [Haloquadratum walsbyi DSM 16790]
Length = 223
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG ++++ A+ + IV L E + + YE +++ + FL+ +RVD+AA
Sbjct: 17 AGRSTTEIVEAAIDGGIDIVQLREKETTARRRYEIGQTVRTQTAQAGVTFLVNDRVDLAA 76
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL-- 213
AVNA GV L D LP AR + ++GR+V T AA A GAD+L
Sbjct: 77 AVNADGVHLGDDDLPVTAAREVLGQD-------AIIGRSVSTPAAAQRAEDI-GADYLGV 128
Query: 214 VCCFGEGQKADVIEN---------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
+ G K E+ ++ V IP+ + + ++ +++GA G +
Sbjct: 129 GAVYPTGTKDVTAESAEIGPKTVTAITDAVSIPVIGIGGITPSNTTEVIRAGADGVAV 186
>gi|357058222|ref|ZP_09119076.1| hypothetical protein HMPREF9334_00793 [Selenomonas infelix ATCC
43532]
gi|355374075|gb|EHG21376.1| hypothetical protein HMPREF9334_00793 [Selenomonas infelix ATCC
43532]
Length = 771
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 34/175 (19%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT---------------FLRF 406
D+ F + +VGE++SGKS+ INALLG+ L TT +T +R
Sbjct: 43 DDVFRIAVVGEFSSGKSTFINALLGRDVLSHASKETTAVLTQVVNVPPNDPRVGTGLVRH 102
Query: 407 SDLASEEQQR-----------CERHPDGQYICYLP--SPIL---KEMIIVDTPGTNVILQ 450
D +E++ R ERH Q I + +P+L + ++++DTPG N +
Sbjct: 103 KD-GTEQEIRMDELREYTTTVSERHAVAQEIASVDIYTPLLHAERPLMLIDTPGLNGVAS 161
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLY 504
T V A ++++ R LT+ ++ FLR Y ++ +FV N D +
Sbjct: 162 GHLDQTIRVVQEAHACIYLLQ-QRGLTKEDLAFLRNYLMPNQQNFIFVQNFIDAF 215
>gi|428320642|ref|YP_007118524.1| small GTP-binding protein [Oscillatoria nigro-viridis PCC 7112]
gi|428244322|gb|AFZ10108.1| small GTP-binding protein [Oscillatoria nigro-viridis PCC 7112]
Length = 547
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S +NAL+G+ + G T E+ G+
Sbjct: 133 VVVFGTGSAGKTSAVNALVGRMAGQVGAPMGTTEV---------------------GETY 171
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
I +E+ I DTPG V ++ L + RADL+LFV+ D L +SE
Sbjct: 172 TLKLKGIDRELAITDTPGILEAGVAGTYREELARQLAARADLILFVLDGD--LRKSEYEP 229
Query: 484 LRYTQQWKKKVVFVLNKSDLY 504
LR + K+ + V NK DLY
Sbjct: 230 LRTLAEIGKRSIVVFNKVDLY 250
>gi|357058220|ref|ZP_09119074.1| hypothetical protein HMPREF9334_00791 [Selenomonas infelix ATCC
43532]
gi|355374073|gb|EHG21374.1| hypothetical protein HMPREF9334_00791 [Selenomonas infelix ATCC
43532]
Length = 795
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQR------CE 418
+ + +G+Y++GKS +IN LLG+ L G V TT +T++R+ +EE R C
Sbjct: 38 YFVAFIGQYSAGKSYLINNLLGRELLPQGTVETTPLLTYIRY---GAEEMARLYYLDGCV 94
Query: 419 RHPDGQYIC---------------------YLPSPILKE-MIIVDTPGTNVILQRQQRLT 456
+C +L + IL++ +I++DTPG N +++ + L
Sbjct: 95 EEVSLAEVCQIIQSGSDCGRNLAAVEHMEVFLAAEILQQGLILLDTPGVNTLIEHHEHLL 154
Query: 457 EEFVPRADLVLFV 469
+ + A +++V
Sbjct: 155 MQSLALASSIIYV 167
>gi|322421976|ref|YP_004201199.1| tRNA modification GTPase TrmE [Geobacter sp. M18]
gi|320128363|gb|ADW15923.1| tRNA modification GTPase TrmE [Geobacter sp. M18]
Length = 455
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 32/172 (18%)
Query: 339 DVIKKASPLMEEVSLLIDAVSQ---IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV 395
DV+ K +P + E+ LI+ + + E +VI G+ N GKSS++N LL ++ V
Sbjct: 192 DVLGKVAPALAELDALIEGFDEGRVLREGVSVVIAGKPNVGKSSLLNTLLKEKRAIVTSV 251
Query: 396 PTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT----NVILQR 451
P T DL E I LP +L DT G + + Q
Sbjct: 252 PGTTR-------DLIEEVVN----------INGLPVKLL------DTAGIRESEDQVEQE 288
Query: 452 QQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
RL+ + +P+ADLVLFV+ P E + L K + V NKSDL
Sbjct: 289 GVRLSLDRIPKADLVLFVVDGSSPFGEEDASILLAI--GSKSCIVVRNKSDL 338
>gi|377810814|ref|YP_005043254.1| hypothetical protein BYI23_D002210 [Burkholderia sp. YI23]
gi|357940175|gb|AET93731.1| hypothetical protein BYI23_D002210 [Burkholderia sp. YI23]
Length = 503
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 25/155 (16%)
Query: 361 IDEPFLLVIVGEYNSGKSSVIN------ALLGKR----YLKDGVVPTTNEITFLRFSDLA 410
D+ LL++ G++N+GKSS N A GK YL DG + T E RF +
Sbjct: 94 FDDKVLLLVFGKFNAGKSSFCNLIADRFAAHGKAVEYFYLDDGHIVETPE----RFREGV 149
Query: 411 SEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI 470
+E R + + ++++VDTPG + + LT+ F AD VL++
Sbjct: 150 TETTARMQ-----------GVRLAGKLVLVDTPGLHSVTPENAELTQRFTDSADGVLWLT 198
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
S+ P E+ L K ++ V+ +SD+Y+
Sbjct: 199 SSTSPGQVQELDELGRELHRNKPLLPVVTRSDVYE 233
>gi|333912837|ref|YP_004486569.1| hypothetical protein DelCs14_1182 [Delftia sp. Cs1-4]
gi|333743037|gb|AEF88214.1| hypothetical protein DelCs14_1182 [Delftia sp. Cs1-4]
Length = 665
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 28/147 (19%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+FV++AD +T+S++
Sbjct: 196 LINMPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFVLAADTGVTKSDLAI- 253
Query: 485 RYTQQWKKKV----------------VFVLNKSDLYQN----AFELEEAISFVKENTMKL 524
W+ V + VLNK D + A +++ + ++ + ++
Sbjct: 254 -----WRDHVLPPDVASGQHALADSRLVVLNKIDTLWDSLSSASQVQAQLQRQRQESAQM 308
Query: 525 LNIENVTIYPVSARSTLEAKLSVSSAV 551
L + + PVSA+ L AK+S + A+
Sbjct: 309 LGLPMERVLPVSAQKGLVAKVSSNDAL 335
>gi|323703452|ref|ZP_08115099.1| thiamine-phosphate pyrophosphorylase [Desulfotomaculum nigrificans
DSM 574]
gi|323531542|gb|EGB21434.1| thiamine-phosphate pyrophosphorylase [Desulfotomaculum nigrificans
DSM 574]
Length = 216
Score = 53.5 bits (127), Expect = 5e-04, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAA 156
G D+I +A+ ++ L E GK + LL+ + ++ + F++ +RVD+A A
Sbjct: 21 GRSTEDVIRQAILGGATVIQLREKEYCGKELIRVGKLLRDMTREMGVTFIVNDRVDVAFA 80
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADF--LV 214
V+A GV L LP VAR + +VG + +D A+ + GAD+ L
Sbjct: 81 VDADGVHLGQDDLPIEVARQILGPD-------KIVGISAGNMDEVL-AAQARGADYVGLG 132
Query: 215 CCFGEGQKADVIE-------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGF-----VI 262
F G K+D E + T IP+ + + ++ +++GA+G V+
Sbjct: 133 PVFATGTKSDAGEAVGLDLVKQVCTRATIPVVGIGGIKANNAAQVIEAGAAGVSVITAVV 192
Query: 263 SLEDLS 268
S +D++
Sbjct: 193 SADDVT 198
>gi|254413955|ref|ZP_05027723.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196179091|gb|EDX74087.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 649
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 49/215 (22%)
Query: 337 AIDVIKKAS---PLMEEVSLLIDAVSQI-DEPFL-LVIVGEYNSGKSSVINALLGKRYLK 391
AI+VI + + E+ ID + Q +P+L L IVGE++SGKS++INALL LK
Sbjct: 26 AIEVIAHSDISESIRAELHQQIDRIQQRRQDPYLYLAIVGEFSSGKSTLINALLRDDLLK 85
Query: 392 DGVVPTTNEITFLRFSD---------------LASEEQQRCERHP-----DG----QYI- 426
+ T T LR D L +++ + P DG +I
Sbjct: 86 TSALVATTAATRLRHGDELIVETSFKGSRPGILKTKKNAKQITVPWLAGVDGIDTRHFIH 145
Query: 427 ----------------CYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFV-PRADLVLF 468
Y P+ L ++I+DTPGTN + +T + AD +
Sbjct: 146 VVTSQDEVAKEVASLTIYHPASFLANNIVIIDTPGTNATNPKHGAITRRIIESEADAAVV 205
Query: 469 VISADRPLTESEVVFLRYT-QQWKKKVVFVLNKSD 502
VI A PL+++ V FL + + + +FV+ K D
Sbjct: 206 VIPATTPLSQTLVNFLADSLHPFLHRCIFVVTKMD 240
>gi|434387670|ref|YP_007098281.1| small GTP-binding protein domain protein [Chamaesiphon minutus PCC
6605]
gi|428018660|gb|AFY94754.1| small GTP-binding protein domain protein [Chamaesiphon minutus PCC
6605]
Length = 469
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 297 NVKLLDTSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLME-EVSLLI 355
+V L DT F ++ E +Q +T R +L+E +D+ ++ +E E++ L
Sbjct: 9 SVNLTDTIAEF-------NTIQAERNYQQAQDTLRRILVE-LDLTQRERFGLESEIAELS 60
Query: 356 DAVSQIDEP-FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQ 414
D + ++D F + G GKSS++NAL+G+ + GV + E Q
Sbjct: 61 DMLRKLDRAVFQVAAFGMVGRGKSSLLNALIGQTVFEAGV-----------LHGVTKERQ 109
Query: 415 QRCERHPDGQYICYL----PSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFV 469
Q + Q L P+ + + + +DTPG + V ++Q L + + DL+LF+
Sbjct: 110 QVVWEVDNWQDEFDLDKDTPATLQEAIEFIDTPGIDEVDGNKRQLLAYDIARQVDLILFI 169
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
I+ D +TE E+ L + K ++ V NK DL+
Sbjct: 170 IAGD--ITELELQTLSQLRTAGKPMLLVFNKVDLF 202
>gi|229084678|ref|ZP_04216945.1| Reticulocyte binding protein [Bacillus cereus Rock3-44]
gi|228698634|gb|EEL51352.1| Reticulocyte binding protein [Bacillus cereus Rock3-44]
Length = 1209
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ +A+SQID ++ SGK + L R +
Sbjct: 671 KQALLEDMKAVYKL--FHYEIATFEEALSQID----TILKYPSPSGKQKTTFSFL--RAV 722
Query: 391 KDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G +N ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 723 QRGYQAVSNHLGEQVQVTLEAFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 779
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 780 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 839
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 840 NAADLAQSEDELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGPDRVVVTVKSGEHYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQLCKNGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVINQID 193
>gi|423408475|ref|ZP_17385624.1| hypothetical protein ICY_03160 [Bacillus cereus BAG2X1-3]
gi|401657565|gb|EJS75073.1| hypothetical protein ICY_03160 [Bacillus cereus BAG2X1-3]
Length = 1219
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A+SQID+ V+ SGK + L R +
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALSQIDK----VMKYPSPSGKQKTTFSFL--RAV 731
Query: 391 KDGV------VPTTNEITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G + E+T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 732 QKGYDAVSAHIGEQVEVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|358061143|ref|ZP_09147813.1| hypothetical protein SS7213T_12767 [Staphylococcus simiae CCM 7213]
gi|357256391|gb|EHJ06769.1| hypothetical protein SS7213T_12767 [Staphylococcus simiae CCM 7213]
Length = 1146
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 32/177 (18%)
Query: 354 LIDAVSQID-----EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
L+D ++Q+ + + L VG +++GKS++IN LL ++ L VPTT+ + +D
Sbjct: 25 LVDTINQVIKKVYLQQYTLSFVGHFSAGKSTLINLLLEQQILPSSPVPTTSNTAIVSVAD 84
Query: 409 LASEEQQRCERHPDGQY-----------------------ICYLPSPILKEMIIVDTPGT 445
+ P+ QY I + S + + DTPG
Sbjct: 85 ----NNEIIANLPNQQYTTLNSYDEVKAMNRQNVDVESVEINFQSSKFKQGFTLQDTPGV 140
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
+ + Q +TE+F+ +++V + + + + F+++ VVFV+N+ D
Sbjct: 141 DSNVSSHQTMTEQFMYTSNMVFYTVDYNHVQSALNFKFMKHMNDVGIPVVFVINQVD 197
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 429 LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ 488
L LK+ IIVD+ G + QR TE+ + +DL+L+V + T+++ F+ + +
Sbjct: 733 LSHEWLKDKIIVDSLGLHSNNQRHSNETEQILTSSDLILYVSYFNHSFTDNDKAFIEHMK 792
Query: 489 ---QWKKKVVF--VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEA 543
Q F ++N DL ++ E +A+ E+ + +N+++ IY VS+R L+
Sbjct: 793 NMNQLHDHQAFKMIINAVDLAESD-EDRQAVETYVEDALNQVNLQS-DIYSVSSRQALQG 850
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 325 QLIETERSVLLEAIDVIKKASPLMEEVSLLI-DAVSQIDEPFLLV-IVGEYNSGKSSVIN 382
Q+ + + + A++VI+ PL E+ I D + ++D+ + + + G +++GKSS+IN
Sbjct: 549 QVTTSNQQTISAALNVIQDV-PLFEQTKQDIADTLQRLDDKVVKIGVFGTFSAGKSSLIN 607
Query: 383 ALLGKRYLKDGVVPTTNEITFLRFSDLAS 411
ALLG L PTT T + + + +S
Sbjct: 608 ALLGDTILVSSPNPTTAATTEISYGNTSS 636
>gi|418055771|ref|ZP_12693825.1| GTP-binding protein engA [Hyphomicrobium denitrificans 1NES1]
gi|353210049|gb|EHB75451.1| GTP-binding protein engA [Hyphomicrobium denitrificans 1NES1]
Length = 469
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 30/204 (14%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
++ IVG N GKS++ N L G R SDL + R DG
Sbjct: 12 VVAIVGRPNVGKSTLFNRLTGTRAAL--------------VSDLPGLTRDRR----DGIA 53
Query: 426 ICYLPSPILKEMIIVDTPG-----TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
+ E+ ++DT G I R ++ TE+ + ADLVLFVI A +T ++
Sbjct: 54 EIFG-----TELRLIDTAGLEEARQGTIADRMRKQTEQAIAAADLVLFVIDARAGVTAAD 108
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR-- 538
F R +Q K VV V NK++ Q + +A S + + I ++A
Sbjct: 109 SSFARIARQSGKPVVLVANKAEGRQGTDGVLDAFSLGLGAPIAISAEHGEGIGDLAADIV 168
Query: 539 STLEAKLSVSSAVGKDHSELSVND 562
+ L K+ ++ G+DH V+D
Sbjct: 169 AALGLKIPKTAKKGRDHDAEPVDD 192
Score = 47.0 bits (110), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDG 423
P + IVG N+GKS+++NALLG+ + G P L +ASE + G
Sbjct: 202 PIRVAIVGRPNAGKSTLVNALLGEDRMITGPEPG------LTRDSVASELDYK------G 249
Query: 424 QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTE-----------EFVPRADLVLFVISA 472
Q I ++ DT G L+R+ ++TE + A++V+ +I A
Sbjct: 250 QSI-----------LLFDTAG----LRRKAKITETAEKLAASDAVRAIRFAEVVVLLIDA 294
Query: 473 DRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMK-LLNIENVT 531
+ P ++ + + +V +NK DL E ++ + +K+ + L + NV
Sbjct: 295 EHPFEHQDLTIGHRVTEEGRALVVAINKWDLIP---EKQKTLRDLKKTVAESLAQVPNVP 351
Query: 532 IYPVSARSTLEAKL-SVSSAVGKDHSELSVNDSHWRINTF 570
+ +SARS E+ L + SA+ K H+ + S ++N +
Sbjct: 352 VVAISARS--ESGLDQLMSAIIKTHATWNRRVSTPQLNRW 389
>gi|430743245|ref|YP_007202374.1| GTPase [Singulisphaera acidiphila DSM 18658]
gi|430014965|gb|AGA26679.1| GTPase [Singulisphaera acidiphila DSM 18658]
Length = 570
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 363 EPFLLV-IVGEYNSGKSSVINALLGKRYLKDG-VVPTTNEITFLRFSD--LASEEQQRCE 418
EP L V + G +GKS++INA G + + PTT + + L S ++
Sbjct: 53 EPVLTVALAGGTGAGKSTLINAFAGTVIAESSEIRPTTRHLQAYHHQEDSLGSLTEELAS 112
Query: 419 RHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTE 478
+ ++ + P L+ ++VDTP + + + + T+ + R+ LVL+V S +R L E
Sbjct: 113 K---ATFVAH-DRPELRHKMLVDTPDLDSFMVQHRATTKALLKRSGLVLYVFSPERYLEE 168
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
LR ++ +LNK D +A EL++ + ++ + L E++ I+ + AR
Sbjct: 169 RTWSILRTETEFSAAAA-ILNKVDRVGSAEELDQITADLRAH-FAALGHEDIRIFHLCAR 226
Query: 539 S 539
+
Sbjct: 227 A 227
>gi|291286554|ref|YP_003503370.1| hypothetical protein Dacet_0620 [Denitrovibrio acetiphilus DSM
12809]
gi|290883714|gb|ADD67414.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM
12809]
Length = 577
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 26/187 (13%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
I++ + +VG +++GKSS IN+ LGK YL + P T T LR+S E
Sbjct: 42 INKELTIPVVGAFSAGKSSFINSFLGKDYLSVNITPETAIATELRYSADEKIEAIASSGS 101
Query: 421 PDGQYICYLPSPILKE--------------------MIIVDTPGTNVILQRQQRLTEEFV 460
P I + S I K +I+VD PG N + R E++
Sbjct: 102 PTTYEITEMASVISKSEQFKFIRLYLNNANLKSIAPLILVDMPGLNSPMDLHNRAIIEYI 161
Query: 461 PRADLVLFVISADR-PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
+ L + S + LT S V L +++ K F L+K++L ++ E+EE +K+
Sbjct: 162 EKGVYYLVLTSIEEGTLTRSMVRQLLDIKEFGKDFSFFLSKTNL-RSEKEVEE----IKQ 216
Query: 520 NTMKLLN 526
N ++ +N
Sbjct: 217 NLLEQIN 223
>gi|319795624|ref|YP_004157264.1| hypothetical protein Varpa_4993 [Variovorax paradoxus EPS]
gi|315598087|gb|ADU39153.1| hypothetical protein Varpa_4993 [Variovorax paradoxus EPS]
Length = 655
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 22/135 (16%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+L++ ++I+DTPG N I + LT +P+A V+F++ A+ +T S++
Sbjct: 196 VLNMPHPLLEQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVFILGAETGVTRSDLSI- 253
Query: 485 RYTQQWKKKVV----------FVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
W++ ++ VLNK D ++ ++E I +++ +LL +
Sbjct: 254 -----WREHLITEDEGGDTRFVVLNKIDTMWDSLSTHAQIELQIERQRDSAARLLEVPLA 308
Query: 531 TIYPVSARSTLEAKL 545
+ PVSA+ L+AK+
Sbjct: 309 QVLPVSAQKGLQAKI 323
>gi|289522197|ref|ZP_06439051.1| thiamine-phosphate diphosphorylase [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289504033|gb|EFD25197.1| thiamine-phosphate diphosphorylase [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 210
Score = 53.5 bits (127), Expect = 6e-04, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 99 GDALDLIDEAVAKFVG---IVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIA 154
G + L D+A G + L G+ Y AA +K + K++ LF++ +R+D+A
Sbjct: 21 GRGVPLCDQARLAIQGGATAIQLRDKRMQGRDFYRAALAIKEICKEKGVLFIVNDRLDVA 80
Query: 155 AAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV 214
A GV L + LP A + ++G +V+T D A A +GAD+L
Sbjct: 81 LTAGADGVHLGQEDLPLEAAEKIAPEGF-------IIGISVRTPDQAIEA-ERKGADYLG 132
Query: 215 C--CFGEGQKADV----IE--NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGF-----V 261
FG K D IE + N K+P + + +V + L++GA G V
Sbjct: 133 VGDVFGTSSKPDAKTIGIEGLKEVCVNTKLPCVAIGGIGVHNVKQALQAGAVGVAVISAV 192
Query: 262 ISLEDLS 268
IS +D++
Sbjct: 193 ISQKDIA 199
>gi|160900860|ref|YP_001566442.1| hypothetical protein Daci_5428 [Delftia acidovorans SPH-1]
gi|160366444|gb|ABX38057.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
Length = 672
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 28/147 (19%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+FV++AD +T+S++
Sbjct: 203 LINMPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFVLAADTGVTKSDLAI- 260
Query: 485 RYTQQWKKKV----------------VFVLNKSDLYQN----AFELEEAISFVKENTMKL 524
W+ V + VLNK D + A +++ + ++ + ++
Sbjct: 261 -----WRDHVLPPDVASGQHALADSRLVVLNKIDTLWDSLSSASQVQAQLQRQRQESAQM 315
Query: 525 LNIENVTIYPVSARSTLEAKLSVSSAV 551
L + + PVSA+ L AK+S + A+
Sbjct: 316 LGLPMERVLPVSAQKGLVAKVSSNDAL 342
>gi|424850894|ref|ZP_18275291.1| hypothetical protein OPAG_07739 [Rhodococcus opacus PD630]
gi|356665559|gb|EHI45630.1| hypothetical protein OPAG_07739 [Rhodococcus opacus PD630]
Length = 614
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL 390
++L +A+DV K+ + L A +++ +P + +V+VG GKS +N+LL
Sbjct: 18 ALLEQALDVAKRFG-RGDLAQRLDSARTRVQDPRMRIVVVGPLKQGKSQFVNSLLNLTVC 76
Query: 391 KDGVVPTTNEITFLRFSDLASEE--------------------------QQRCERHPDGQ 424
G TT T ++ ++ AS E R E +
Sbjct: 77 SVGDDETTAIPTVVQNAETASAELILADPGADPIRVPLPLDELNGITPASPRAEGREVLR 136
Query: 425 YICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
LPSP+L + +++VDTPG T +P +D V + A + TE E+ F
Sbjct: 137 VEVNLPSPLLADGLVLVDTPGVGGAGNPHAASTLGLIPASDAVFVLSDASQEFTEPELGF 196
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+R V +++K+DLY + E+ EA
Sbjct: 197 IRQVTSLCPSVACLISKTDLYPHWREIVEA 226
>gi|419421750|ref|ZP_13961978.1| ABC transporter [Propionibacterium acnes PRP-38]
gi|422395256|ref|ZP_16475296.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL097PA1]
gi|327334127|gb|EGE75841.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL097PA1]
gi|379978241|gb|EIA11566.1| ABC transporter [Propionibacterium acnes PRP-38]
Length = 621
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + R + D + + P I + + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLVRSRVASN-DASSLQLVAEPDIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q+ + V ++
Sbjct: 173 VTSAARYADAVPWDFLNEAQERHASIAVVCDR 204
>gi|411118885|ref|ZP_11391265.1| small G protein, GTPase SAR1 [Oscillatoriales cyanobacterium
JSC-12]
gi|410710748|gb|EKQ68255.1| small G protein, GTPase SAR1 [Oscillatoriales cyanobacterium
JSC-12]
Length = 554
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NAL+G+ K G T E+ GQ
Sbjct: 129 VVVFGTGSAGKTSIVNALIGRMVGKVGAPMGTTEV---------------------GQTY 167
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
I +E++I DTPG V +++L + ADL+LFV+ D L +SE
Sbjct: 168 SLPLQGINREILITDTPGILEAGVAGTEREKLARKLATEADLLLFVLDND--LRQSEYEP 225
Query: 484 LRYTQQWKKKVVFVLNKSDLY 504
L + K+ + +LNK+DLY
Sbjct: 226 LVGLAKIGKRSLIILNKADLY 246
>gi|443320469|ref|ZP_21049567.1| dynamin family protein [Gloeocapsa sp. PCC 73106]
gi|442789819|gb|ELR99454.1| dynamin family protein [Gloeocapsa sp. PCC 73106]
Length = 562
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL----------RFSDLASEEQ 414
F L +VGE+N GKS++IN LLG+ + G + TT IT + RFS SE +
Sbjct: 75 FQLAMVGEFNRGKSTLINRLLGRSLVPVGKLSTTAIITSITAGVEESMKVRFSQEQSEVR 134
Query: 415 QRCERHPD-----GQYIC----YLPSPILKEMII--VDTPGTNVILQRQQRLTEEFVPRA 463
E + G+ + + +P L+ + I +DTPG + + L + + R
Sbjct: 135 SLQESSWNDLLETGEKVVRVELTIDNPWLRSLDINLIDTPGIGNLYEHHTSLVFDLLSRC 194
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKK--KVVFVLNKSDLYQNAFELE---EAISFVK 518
D + V+SA P E F++ + +++ V++ Y + F LE ++ ++
Sbjct: 195 DAAILVVSAMSPFGMVEETFIKQEMIARHIDRILIVVS----YLDTFTLENRARLLAHIR 250
Query: 519 ENTMKLLNIENVTIYPV 535
E +K+ + +TI P+
Sbjct: 251 ERVLKISD--KITILPL 265
>gi|443317039|ref|ZP_21046462.1| small GTP-binding protein domain protein [Leptolyngbya sp. PCC
6406]
gi|442783379|gb|ELR93296.1| small GTP-binding protein domain protein [Leptolyngbya sp. PCC
6406]
Length = 502
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 342 KKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNE 400
++ + L EVS L + ++++ + + + G GKSSV+N LLG G T+
Sbjct: 61 RETAELAPEVSRLTGLLDKLNQTVIHIAVFGLVGRGKSSVLNGLLGAEIFATG---PTHG 117
Query: 401 ITFLRFSDLASEEQQRCERH-PDGQYI--CYLPSPILKEMIIVDTPGTN-VILQRQQRLT 456
+T D+ + E P+GQ + L + ++DTPG + V ++RL
Sbjct: 118 VT----QDIGQAAWEISEETLPEGQSVWRVALQGQGRSRIELIDTPGLDEVHGAARERLA 173
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
++ DL+LFV++ D +T E L +Q K +V V NK D Y +
Sbjct: 174 QQIAREVDLILFVVAGD--ITRVEYDALVALRQASKPIVLVFNKVDQYPD 221
>gi|423397617|ref|ZP_17374818.1| hypothetical protein ICU_03311 [Bacillus cereus BAG2X1-1]
gi|401649663|gb|EJS67241.1| hypothetical protein ICU_03311 [Bacillus cereus BAG2X1-1]
Length = 1219
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A+SQID+ V+ SGK + L R +
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALSQIDK----VMKYPSPSGKQKTTFSFL--RAV 731
Query: 391 KDGV------VPTTNEITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G + E+T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 732 QKGYDAVSAHIGEQVEVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|288818131|ref|YP_003432479.1| thiamine monophosphate synthase [Hydrogenobacter thermophilus TK-6]
gi|384128895|ref|YP_005511508.1| thiamine monophosphate synthase [Hydrogenobacter thermophilus TK-6]
gi|288787531|dbj|BAI69278.1| thiamine monophosphate synthase [Hydrogenobacter thermophilus TK-6]
gi|308751732|gb|ADO45215.1| thiamine monophosphate synthase [Hydrogenobacter thermophilus TK-6]
Length = 185
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 22/182 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKD-RALFLIAERVDIAAA 156
G D + + + + V +V L S K Y+ A + + ++ AL LI ERVDIA A
Sbjct: 15 GEDFWESLRRVLERGVRMVQLREKALSAKEYYQKALEAREITREYSALLLINERVDIALA 74
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCC 216
V A GV L +GLP R KD +VG + L +A A EGADF+
Sbjct: 75 VGADGVHLPQEGLPPSCVRKIKKDL--------IVGFSAHDLKSALYA-QEEGADFITLS 125
Query: 217 --FGEGQKADV------IENSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
F + + + V IP++ + + K+GA G + +S
Sbjct: 126 PIFKTSSHPEREPLGLEVLKDISKRVSIPVYALGGITWEKIKLCYKNGAYG----IAGVS 181
Query: 269 LF 270
LF
Sbjct: 182 LF 183
>gi|227875438|ref|ZP_03993579.1| possible ABC superfamily ATP binding cassette transporter
[Mobiluncus mulieris ATCC 35243]
gi|227843992|gb|EEJ54160.1| possible ABC superfamily ATP binding cassette transporter
[Mobiluncus mulieris ATCC 35243]
Length = 555
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----------LA 410
+D P + V+VG GKS+++N+L+G PTT + D L
Sbjct: 50 LDAPLVAVLVGSTGVGKSTILNSLVGSVTETSAQRPTTLTPVLVHHPDDELWLAGDRILG 109
Query: 411 SEEQQRCE--------RHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVP 461
E+ R E RHPD + S L+ ++++DTP T+ + Q +T
Sbjct: 110 GFEKLRIEEGDDSPVGRHPDKPLMKMTTSTKLQPGIVLIDTPDTDSYQEANQHITSHLAE 169
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
DL +FV +A R + LR + + VLN+
Sbjct: 170 VGDLWIFVTTAQRYAEPQGLALLRAAAKRHAALGVVLNR 208
>gi|269977310|ref|ZP_06184283.1| ATP-binding protein [Mobiluncus mulieris 28-1]
gi|306818749|ref|ZP_07452471.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
mulieris ATCC 35239]
gi|307700983|ref|ZP_07638008.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
gi|269934613|gb|EEZ91174.1| ATP-binding protein [Mobiluncus mulieris 28-1]
gi|304648435|gb|EFM45738.1| ABC superfamily ATP binding cassette transporter [Mobiluncus
mulieris ATCC 35239]
gi|307613978|gb|EFN93222.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length = 555
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----------LA 410
+D P + V+VG GKS+++N+L+G PTT + D L
Sbjct: 50 LDAPLVAVLVGSTGVGKSTILNSLVGSVTETSAQRPTTLTPVLVHHPDDELWLAGDRILG 109
Query: 411 SEEQQRCE--------RHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVP 461
E+ R E RHPD + S L+ ++++DTP T+ + Q +T
Sbjct: 110 GFEKLRIEEGDDSPVGRHPDKPLMKMTTSTKLQPGIVLIDTPDTDSYQEANQHITSHLAE 169
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
DL +FV +A R + LR + + VLN+
Sbjct: 170 VGDLWIFVTTAQRYAEPQGLALLRAAAKRHAALGVVLNR 208
>gi|426407571|ref|YP_007027670.1| hypothetical protein PputUW4_00658 [Pseudomonas sp. UW4]
gi|426265788|gb|AFY17865.1| hypothetical protein PputUW4_00658 [Pseudomonas sp. UW4]
Length = 568
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Query: 369 IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----LASEEQQRCERHPD-- 422
++G +++GKSS++NAL+GK L G+ P T T LR+S LA + ER P
Sbjct: 43 VIGAFSAGKSSLLNALMGKDILPVGIAPETELATELRYSSEPYLLAIKPDGVQERLPVEA 102
Query: 423 -----------GQYICYLPSPILKE---MIIVDTPGTNVILQRQQRLTEEFVPRA-DLVL 467
YL S LK +++VD PG L+ + ++PR V+
Sbjct: 103 LNSINRRSSEFSHLRLYLDSEALKAIAPLVLVDMPGFGSSLENHNKAIAYYLPRGVHFVV 162
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
D +T+S + L + + F+L+K +L + A ++E+ +++ +
Sbjct: 163 LTSIEDGNITQSMLRKLDELKTYNTDFTFLLSKCNL-RAADQVEDVQAYIDD 213
>gi|119485227|ref|ZP_01619612.1| hypothetical protein L8106_07254 [Lyngbya sp. PCC 8106]
gi|119457455|gb|EAW38580.1| hypothetical protein L8106_07254 [Lyngbya sp. PCC 8106]
Length = 476
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG+ + G + + T + +++ Q + D +
Sbjct: 68 IAVFGMVGRGKSSILNALLGQNIFETGPIHGVTQATQAQSWHVSNPSIQTSDMGND--VV 125
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
Y S ++ ++DTPG + V + ++++ + RADL+LF+I+ D +T+ E L
Sbjct: 126 SYRIS----QVELIDTPGIDEVDGKTREKIAHQVAQRADLLLFIIAGD--ITQVEYEALS 179
Query: 486 YTQQWKKKVVFVLNKSDLYQNA 507
++ K ++ V NK D Y A
Sbjct: 180 QLREAGKPMLLVFNKVDQYPEA 201
>gi|193216042|ref|YP_001997241.1| hypothetical protein Ctha_2344 [Chloroherpeton thalassium ATCC
35110]
gi|193089519|gb|ACF14794.1| hypothetical protein Ctha_2344 [Chloroherpeton thalassium ATCC
35110]
Length = 687
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 68/237 (28%)
Query: 329 TERSV-LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGK 387
TER V L E S +E++ I A+ E F LV++GE GK+S+INALLG
Sbjct: 15 TERVVSLFEETCKALNMSETLEQIRPGIHALRA--EKFTLVVIGEIKKGKTSLINALLG- 71
Query: 388 RYLKDGVVPTTNEITF---------------------------LRFSDLASEEQ----QR 416
LK+ V+P ++++ RF +++S+E +R
Sbjct: 72 --LKN-VLPVSSDVATSTVFKVVYGPKRRNVVLLESGADKADATRFHEMSSDEMAKEFER 128
Query: 417 CERHP---------DGQYICY-------------------LPS-PILKEMIIVDTPGTNV 447
R D Y +P P+ K + I+DTPG
Sbjct: 129 LSRRKKTLIEKEVSDEDLFLYGAEDGNPGNEKGVDHIRIEIPCEPLRKGLEIIDTPGLGG 188
Query: 448 ILQRQQRLTEEFVPRADLVLFVI-SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+++ +T ++P A VLFV+ S P T+ E FL + +++FV K D+
Sbjct: 189 LMKAHADITWSYIPNAHAVLFVLESVQSPFTKDEQTFLSNIKNVTPRILFVQTKIDV 245
>gi|428211644|ref|YP_007084788.1| small G protein, GTPase SAR1 [Oscillatoria acuminata PCC 6304]
gi|428000025|gb|AFY80868.1| small G protein, GTPase SAR1 [Oscillatoria acuminata PCC 6304]
Length = 573
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+VI G +SGK+S+INALLG+ + T E+ + + Q ER
Sbjct: 134 VVIFGTGSSGKTSLINALLGRMVGRVDAPMGTTEV-----GETYRLQLQGLER------- 181
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
E++I DTPG V +++L ADL+LFV+ D LT SE
Sbjct: 182 ---------EIVITDTPGILEAGVAGTEREKLARSLATEADLLLFVVDND--LTRSEHQP 230
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVT 531
L Q K+ + VLNK DLY + E E ++ ++E ++ +V
Sbjct: 231 LEVLAQIGKRSIVVLNKIDLYPDE-EREYILAKLRERVTGFISAMDVV 277
>gi|386814714|ref|ZP_10101932.1| small GTP-binding protein [Thiothrix nivea DSM 5205]
gi|386419290|gb|EIJ33125.1| small GTP-binding protein [Thiothrix nivea DSM 5205]
Length = 448
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G + GKSS++NALLGK V+ + S Q+ + + D
Sbjct: 71 IAVFGRVSVGKSSLLNALLGKPVFSVSVL----------HGETRSVSMQQWQEYSDSG-- 118
Query: 427 CYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
+ ++DTPG N I + ++++ E R+DLVLFVI +D LT+ E L+
Sbjct: 119 ----------IFLIDTPGINEIDGESREKMAHEVANRSDLVLFVIDSD--LTDVEFQALK 166
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
+ + V+NK+D Y E + ++ T ++ EN+ A
Sbjct: 167 IVAAKHRPTLLVVNKADRYTED-EQRQLRGILRNRTQGIITPENIIFTTAQA 217
>gi|384105023|ref|ZP_10005958.1| hypothetical protein W59_26786 [Rhodococcus imtechensis RKJ300]
gi|383836873|gb|EID76275.1| hypothetical protein W59_26786 [Rhodococcus imtechensis RKJ300]
Length = 614
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL 390
++L +A+DV K+ + L A +++ +P + +V+VG GKS +N+LL
Sbjct: 18 ALLEQALDVAKRFG-RGDLAQRLDSARTRVQDPRMRIVVVGPLKQGKSQFVNSLLNLTVC 76
Query: 391 KDGVVPTTNEITFLRFSDLASEE--------------------------QQRCERHPDGQ 424
G TT T ++ ++ AS E R E +
Sbjct: 77 SVGDDETTAIPTVVQNAETASAELLLADPGADPIRVPLPLDELNGITPASPRAEGREVLR 136
Query: 425 YICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
+PSP+L + +++VDTPG T +P +D V + A + TE E+ F
Sbjct: 137 VEVNVPSPLLADGLVLVDTPGVGGAGNPHAASTLGLIPASDAVFVLSDASQEFTEPELGF 196
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+R V +++K+DLY++ E+ EA
Sbjct: 197 IRQVTSLCPSVACLISKTDLYRHWREIVEA 226
>gi|336419286|ref|ZP_08599552.1| thiamine-phosphate diphosphorylase [Fusobacterium sp. 11_3_2]
gi|336163977|gb|EGN66891.1| thiamine-phosphate diphosphorylase [Fusobacterium sp. 11_3_2]
Length = 206
Score = 53.1 bits (126), Expect = 7e-04, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAA 156
G D I+EA+ V IV L S K + A +K + K + F+I +R+DIA A
Sbjct: 19 GKDFYKCIEEAIKGGVKIVQLREKTLSTKDFFIKALKIKEICKSYGVVFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDIPIEKAREILKDKF-------LIGATARNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + + +VKIP+F + +VS G G + S+
Sbjct: 131 AIFGTSTKDNAKKLEMEDLKKIVNSVKIPVFAIGGINTNNVSMLKNIGLQG-ICSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS+ C N
Sbjct: 187 ----GILSEKDCKKAVEN 200
>gi|17231906|ref|NP_488454.1| hypothetical protein all4414 [Nostoc sp. PCC 7120]
gi|17133550|dbj|BAB76113.1| all4414 [Nostoc sp. PCC 7120]
Length = 693
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------FSDLASE-- 412
F L+++G+ GKS+ +NAL+G+ L V P T +T LR F+D S
Sbjct: 70 FRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGAEKKVTIHFNDGKSPQT 129
Query: 413 --------------------EQQRCERHPDGQY-ICYLPSPILKEMI-IVDTPGTNVILQ 450
EQ++ + PD Y + P +L++ I IVD+PG N
Sbjct: 130 LDFQSFKYKYTIDPAEAKKLEQEKKQAFPDVDYAVVEYPLTLLEKGIEIVDSPGLNDTEA 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSD 502
R + L+ +V +LFV+ A +P T E +L Y + V F++N D
Sbjct: 190 RNE-LSLGYVNNCHAILFVMRASQPCTLGERRYLENYIKGRGLSVFFLINAWD 241
>gi|427731262|ref|YP_007077499.1| small GTP-binding protein domain-containing protein [Nostoc sp. PCC
7524]
gi|427367181|gb|AFY49902.1| small GTP-binding protein domain protein [Nostoc sp. PCC 7524]
Length = 450
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 26/157 (16%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ L +S++D + + G + GKS+V+NALLG + L+ G + N +T
Sbjct: 45 ELEALTSTLSKLDSNVIRIAAFGLVSRGKSAVLNALLGNKILQTGPL---NGVT------ 95
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLVL 467
+ R R G ++ E+I DTPG + I + + ++ ++ +ADL+L
Sbjct: 96 ----QWPRSVRWQAG-------GKVIVELI--DTPGLDEIQGESRAQMAKDVARQADLIL 142
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
FV+S D +T +E L +Q +K ++ V NK DLY
Sbjct: 143 FVVSGD--ITRTEYQALLELRQSQKPLILVFNKIDLY 177
>gi|387929462|ref|ZP_10132139.1| putative GTPase [Bacillus methanolicus PB1]
gi|387586280|gb|EIJ78604.1| putative GTPase [Bacillus methanolicus PB1]
Length = 1223
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 427 CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL- 484
++ SP+ +E I +VDTPG + I R + ++ +D +LFV + ++++ FL
Sbjct: 790 VFIDSPLTREGITLVDTPGADSINARHTGVAFNYIKNSDAILFVTYYNHAFSKADREFLI 849
Query: 485 ---RYTQQWK-KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
R + ++ K+ F++N DL N E+ + +V++ ++ I ++PVS+
Sbjct: 850 QLGRVKETFELDKMFFIVNAIDLANNEEEMASVMEYVQDQLVQ-YGIRRPNLFPVSSLLA 908
Query: 541 LEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDG 583
L+ K L + RIN F EK YSF+ G
Sbjct: 909 LKEKT------------LQLETEESRINVF---EKAFYSFICG 936
>gi|158335863|ref|YP_001517037.1| dynamin-like protein [Acaryochloris marina MBIC11017]
gi|158306104|gb|ABW27721.1| bacterial dynamin-like protein [Acaryochloris marina MBIC11017]
Length = 689
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F LV++G+ GKS++INA+LG+R L V P T ++ L++
Sbjct: 73 FRLVVLGDLKRGKSTLINAILGERLLPSDVNPCTAILSVLKYGPQKQVTIYFRDDTPPQQ 132
Query: 408 -DLAS--------EEQQRCERHPDGQY-------ICYLPSPILKEMI-IVDTPGTNVILQ 450
D+A+ + + + D Q + P P+L + I IVDTPG N
Sbjct: 133 IDVATFKWKYTIDPSESKALQDKDEQAFPNVSHAVIEYPLPLLAKGIEIVDTPGLNDTEA 192
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR-YTQQWKKKVVFVLNKSDLYQNAFE 509
R + L ++ VLFV++ +P T E +LR + Q + F+LN D + +
Sbjct: 193 RNE-LVLNYLNDCHAVLFVLNTTQPCTLDERRYLRNFLQNRGLTIFFLLNAWDKVKTSLL 251
Query: 510 LEEAISFVKENTMKLLNIENVTIYP 534
E S + E KL + + P
Sbjct: 252 DPEDKSALTEAEAKLRQVFQTHLSP 276
>gi|124268418|ref|YP_001022422.1| hypothetical protein Mpe_A3234 [Methylibium petroleiphilum PM1]
gi|124261193|gb|ABM96187.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 675
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 413 EQQRCERHPDGQY-ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI 470
++Q C P ++ + LP P+LK ++++DTPG N I + LT +P A +FV+
Sbjct: 186 DEQGCVEVPAWRHALINLPHPLLKRGLVVLDTPGLNAI-GAEPELTVGLLPAAHATVFVL 244
Query: 471 SADRPLTESEVVFLR--YTQQWKKKVVFVLNKSDL----YQNAFELEEAISFVKENTMKL 524
SAD +T+S++ R Q + V VLNK D A E E I +
Sbjct: 245 SADTGVTKSDLAIWRDHLGVQGVSRYV-VLNKIDTLVDPLSTAEETEAQIERQCNDVAHT 303
Query: 525 LNIENVTIYPVSARSTLEAKLSVSSA 550
LN+ ++P+SA+ L A+++ A
Sbjct: 304 LNMPRERVFPLSAKQALAARVAGDEA 329
>gi|304404364|ref|ZP_07386025.1| Dynamin family protein [Paenibacillus curdlanolyticus YK9]
gi|304346171|gb|EFM12004.1| Dynamin family protein [Paenibacillus curdlanolyticus YK9]
Length = 665
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 437 MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL----RYTQQWK- 491
+++VDTPG + + R + ++ AD VLFV + ++++ FL R Q++
Sbjct: 239 IVLVDTPGADSVNARHTGVAFNYIKNADAVLFVTYYNHAFSQADRQFLMQLGRVKDQFEL 298
Query: 492 KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
K+ F++N +DL + EL+ + V +N ++ I +YPVS+ L+AK+
Sbjct: 299 DKMFFLVNAADLAASQEELDGVLKHVSDNLLQ-HGIRFPRLYPVSSLQALDAKM 351
>gi|428309659|ref|YP_007120636.1| dynamin family protein [Microcoleus sp. PCC 7113]
gi|428251271|gb|AFZ17230.1| dynamin family protein [Microcoleus sp. PCC 7113]
Length = 562
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 44/231 (19%)
Query: 353 LLIDAVS---QIDEP-FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
L DA+S I++P F + + G +N GKS+++NA+LG R L ++PTT +R+ +
Sbjct: 29 LYRDAISICDYIEDPIFRIAVFGPFNYGKSTLLNAILGNRTLPIDLIPTTGAAIHVRYGN 88
Query: 409 ------------------------LASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTP 443
A + QR R Y P L+ + ++D P
Sbjct: 89 ELHTRITFKDGTKISESGTEVLKQYAILDDQRRMRGDVTSVHVYCPHSFLQRNVELLDLP 148
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
GTN + Q L + + ADLV+ V+ A + +T E LR W K VVFV
Sbjct: 149 GTN-DREAQDDLVRDQLLTADLVIQVLDARKLMTLYERENLR---DWLLDRGIKTVVFVA 204
Query: 499 NKSDLY--QNAFELEEAISFVKENTMKLL--NIENVTIYPVSARSTLEAKL 545
N +L ++ ++ + FV E+ L NI N +Y V A L A+L
Sbjct: 205 NFLNLLEPEDQKQVYNRLLFVAESFRSELPNNISN--LYRVDALPALRARL 253
>gi|160939901|ref|ZP_02087248.1| hypothetical protein CLOBOL_04792 [Clostridium bolteae ATCC
BAA-613]
gi|158437335|gb|EDP15100.1| hypothetical protein CLOBOL_04792 [Clostridium bolteae ATCC
BAA-613]
Length = 470
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR---FSD----LASEEQQRC-- 417
LV+ ++GKS++INAL+GK + T + ++ F D LA+ E C
Sbjct: 203 LVVTANMSAGKSTLINALVGKSVARTSQEVCTGNVCYISNKAFEDNCISLATPELSLCAT 262
Query: 418 -ERHPDGQY------ICYLPS--PILKEMIIVDTPGTNVILQRQQ-RLTEEFVPRA--DL 465
E+ D + Y I I+DTPG N L + ++ + + + D
Sbjct: 263 QEKLNDFSWQGSIAIAAYFTGTEAINNSWCIIDTPGVNAALYKNHSKIARQVIKKQSYDR 322
Query: 466 VLFVISADRPLTESEVVFLRYTQQW--KKKVVFVLNKSDLYQNAFE-LEEAISFVKENTM 522
+L+VIS T++E+ L++ + + KVVF+LNK D Y++ + + E++ ++ +
Sbjct: 323 LLYVISPTNLGTDAEIRHLKWVSENVDQNKVVFILNKLDDYRSESDNISESMKALRNDLT 382
Query: 523 KLLNIENVTIYPVSA 537
K L I P+SA
Sbjct: 383 K-LGFTAPVICPISA 396
>gi|254410412|ref|ZP_05024191.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196182618|gb|EDX77603.1| Dynamin family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 555
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 55/269 (20%)
Query: 330 ERSVLLEAIDVIKKASPLM---EEVSLLIDAVSQID---EP-FLLVIVGEYNSGKSSVIN 382
E+ V E + ++ A L+ + L DA++ D P F + + G +N GKS+++N
Sbjct: 2 EQDVFRELANTLRSAIGLLDGEQNAQLRQDAIALCDYLENPIFRIAVFGPFNYGKSTLLN 61
Query: 383 ALLGKRYLKDGVVPTTNEITFLRFSD-------LASEEQ-----------------QRCE 418
ALLGKR L ++PTT + + + L++ +Q QR
Sbjct: 62 ALLGKRTLPIDLIPTTGAAIHIGYGNELHTRITLSNGQQISENGTDVLKQFAILDDQRRM 121
Query: 419 RHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLT 477
R + P P LK + ++D PGT+ + Q L + + ADL++ V+ + +T
Sbjct: 122 REDVTNVEVFCPHPFLKTGVELLDLPGTD-DRKAQDALVRDQLLSADLIVQVLDGRKLMT 180
Query: 478 ESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEA------ISFVKENTMKLL- 525
E LR W V+FV+N + N E +E + FV E+ L
Sbjct: 181 LGEREHLR---DWLLDRGINTVIFVVN----FLNLLEPDEQKQVYNRLLFVAESFRSQLP 233
Query: 526 -NIENVTIYPVSARSTLEAKLSVSSAVGK 553
NI N IY V A L +L +A +
Sbjct: 234 NNISN--IYRVDALPALRYRLKGDTAAAQ 260
>gi|452877574|ref|ZP_21954850.1| hypothetical protein G039_11094 [Pseudomonas aeruginosa VRFPA01]
gi|452185703|gb|EME12721.1| hypothetical protein G039_11094 [Pseudomonas aeruginosa VRFPA01]
Length = 568
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 369 IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----LASEEQQRCERHPD-- 422
++G +++GKSS++NAL+GK L G+ P T T LR+S LA + ER P
Sbjct: 43 VIGAFSAGKSSLLNALMGKDILPVGIAPETELATELRYSSEPYLLAIKPDGVQERLPVEA 102
Query: 423 -----------GQYICYLPSPILKE---MIIVDTPGTNVILQRQQRLTEEFVPRA-DLVL 467
YL S LK +++VD PG L+ + ++PR V+
Sbjct: 103 LSTINRRSSEFSHLRLYLDSEALKAIAPLVLVDMPGFGSSLENHNKAIAYYLPRGVHFVV 162
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
D +T+S + L + + F+L+K +L
Sbjct: 163 LTSIEDGNITQSMLRKLDELKTYNTDFTFLLSKCNL 198
>gi|224477797|ref|YP_002635403.1| hypothetical protein Sca_2315 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222422404|emb|CAL29218.1| hypothetical protein SCA_2315 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 321
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 20/159 (12%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKR-----------YLKDGVVPTTNEIT--FLRFSDLAS 411
F +V+ G GKS+ IN L+ + Y+K + E+T +L+ ++ +
Sbjct: 54 FKIVVTGNNGVGKSTFINTLVNQNILPIKPTKVLTYIKHSDLIHGFEVTKLYLKNKEIIT 113
Query: 412 EEQQRCERHPDG-----QYI-CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRAD 464
+ + R + +Y+ +L S LKE ++IVDTP + + Q+ + + A
Sbjct: 114 IDNDKLNRLSENDLSEVEYLEIFLDSNFLKEDVVIVDTPSIMTLSKVQEENIDTQIKEAA 173
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+F+ SAD +EV F++ +Q+ K +FV+NK DL
Sbjct: 174 AHIFLCSADHAGCTAEVDFIQDKEQYLNKTLFVVNKMDL 212
>gi|423600990|ref|ZP_17576990.1| hypothetical protein III_03792 [Bacillus cereus VD078]
gi|401231536|gb|EJR38039.1| hypothetical protein III_03792 [Bacillus cereus VD078]
Length = 1219
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|423594402|ref|ZP_17570433.1| hypothetical protein IIG_03270 [Bacillus cereus VD048]
gi|401224199|gb|EJR30757.1| hypothetical protein IIG_03270 [Bacillus cereus VD048]
Length = 1219
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|452976604|gb|EME76419.1| dynamin [Bacillus sonorensis L12]
Length = 1205
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 427 CYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
YL +P+ K + IVDTPG + I +R L +++ AD +L++ + ++ FLR
Sbjct: 775 VYLHTPVTNKGITIVDTPGASSINKRHTELAFQYMKNADALLYLTYYQHAFSRADRSFLR 834
Query: 486 YTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
K K+ F+LN +DL +A ELE +V+ K I++ IY VS++
Sbjct: 835 KLGLIKDAFGMDKMFFILNAADLAGSAEELESVEHYVRGELSK-EGIKHPHIYHVSSKQE 893
Query: 541 L 541
L
Sbjct: 894 L 894
>gi|448583370|ref|ZP_21646726.1| thiamine-phosphate pyrophosphorylase [Haloferax gibbonsii ATCC
33959]
gi|445729599|gb|ELZ81194.1| thiamine-phosphate pyrophosphorylase [Haloferax gibbonsii ATCC
33959]
Length = 214
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
G D++ AV V +V L AS + YE +++V D + L+ +RVDIAA
Sbjct: 17 GGRSTPDVVQAAVDGGVDVVQLREKHASARDRYEVGREVRAVTADAGVTLVVNDRVDIAA 76
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + D +VGR+V T+
Sbjct: 77 AIDADGVHLGDDDVPVSVAREQLGDD-------AIVGRSVSTV 112
>gi|229056698|ref|ZP_04196102.1| hypothetical protein bcere0026_8180 [Bacillus cereus AH603]
gi|228720634|gb|EEL72195.1| hypothetical protein bcere0026_8180 [Bacillus cereus AH603]
Length = 562
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 40/169 (23%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKR-----YLK-----------DGV------- 394
++Q ++ L V+ G N GKSS+ N + G Y K DGV
Sbjct: 75 INQFEKSVLFVVFGNVNVGKSSIGNFIAGSTKEVSDYYKQIPPFFVYDFADGVNSKEPVQ 134
Query: 395 VPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQR 454
+P + RF + A+EE + + + + + VD+PG + I +
Sbjct: 135 LPNS------RFKENATEETTTIQYYTLNEGLTW-----------VDSPGIHSINGENED 177
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
L + +V ADLVLFV+S+ P E V + +K ++ V+NKSD+
Sbjct: 178 LAKRYVEYADLVLFVMSSSSPAKYDEFVEMSRLMNKQKPMLVVINKSDV 226
>gi|193063717|ref|ZP_03044805.1| putative GTPase of unknown function subfamily [Escherichia coli
E22]
gi|260847115|ref|YP_003224893.1| hypothetical protein ECO103_5080 [Escherichia coli O103:H2 str.
12009]
gi|417176247|ref|ZP_12006043.1| hypothetical protein EC32608_5474 [Escherichia coli 3.2608]
gi|417184572|ref|ZP_12010169.1| hypothetical protein EC930624_5273 [Escherichia coli 93.0624]
gi|417253437|ref|ZP_12045196.1| hypothetical protein EC40967_5563 [Escherichia coli 4.0967]
gi|419292553|ref|ZP_13834631.1| GTPase family protein [Escherichia coli DEC11A]
gi|419309410|ref|ZP_13851292.1| GTPase family protein [Escherichia coli DEC11D]
gi|419872669|ref|ZP_14394695.1| hypothetical protein ECO9450_23009 [Escherichia coli O103:H2 str.
CVM9450]
gi|192930704|gb|EDV83310.1| putative GTPase of unknown function subfamily [Escherichia coli
E22]
gi|257762262|dbj|BAI33759.1| hypothetical protein ECO103_5080 [Escherichia coli O103:H2 str.
12009]
gi|378123324|gb|EHW84742.1| GTPase family protein [Escherichia coli DEC11A]
gi|378142848|gb|EHX04048.1| GTPase family protein [Escherichia coli DEC11D]
gi|386178939|gb|EIH56418.1| hypothetical protein EC32608_5474 [Escherichia coli 3.2608]
gi|386183409|gb|EIH66157.1| hypothetical protein EC930624_5273 [Escherichia coli 93.0624]
gi|386217368|gb|EII33857.1| hypothetical protein EC40967_5563 [Escherichia coli 4.0967]
gi|388333872|gb|EIL00483.1| hypothetical protein ECO9450_23009 [Escherichia coli O103:H2 str.
CVM9450]
Length = 291
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 48/206 (23%)
Query: 315 GFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYN 374
G FE L T R ++LE I + P++ I+G+
Sbjct: 6 GLQAFEQPLASLPCTLRQLILERIQNLTHYEPVIG-------------------IMGKSG 46
Query: 375 SGKSSVINALL-GKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPI 433
+GKSS+ N L G+ V T ++ LRF + R RH
Sbjct: 47 TGKSSLCNELFQGEVSPVSDVNACTRDV--LRF-------RLRSGRH------------- 84
Query: 434 LKEMIIVDTPGTNVILQRQQR---LTEEFVPRADLVLFVISAD-RPLTESEVVFLRYTQQ 489
++IVD PG +R L +P DLVL+VI AD R LT E +L Q
Sbjct: 85 --SLVIVDLPGVGENGRRDHEYRALYRRMLPELDLVLWVIKADDRALTLDEQFWLGVMQP 142
Query: 490 WKKKVVFVLNKSDLYQNAFELEEAIS 515
+++KV+FV+N++D + +E + S
Sbjct: 143 YRQKVLFVINQADKIEPCYEWDTLTS 168
>gi|448680734|ref|ZP_21691025.1| thiamine-phosphate pyrophosphorylase [Haloarcula argentinensis DSM
12282]
gi|445768602|gb|EMA19685.1| thiamine-phosphate pyrophosphorylase [Haloarcula argentinensis DSM
12282]
Length = 211
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 103 DLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNASG 161
+++ EA+ VG+V L + + + YE L+ + ++ + F++ +RVDIA A++A G
Sbjct: 22 EIVAEAIDGGVGVVQLREKDRTARERYELGLELRELTREAGVTFVVNDRVDIAQALDADG 81
Query: 162 VLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV-CCFGEG 220
V L D LP VAR + D L+GR+V T++ A A+++ V F G
Sbjct: 82 VHLGDDDLPVPVARELLGDD-------ALIGRSVSTVEDAREAAAAGADYLGVGAVFATG 134
Query: 221 QKADVIEN----------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
K D+ ++ ++ V IP + + ++ +++GA G +
Sbjct: 135 SKDDIDDDEYAVGTDRVAAIAEAVDIPFVGIGGITAENAAEVVEAGADGVAV 186
>gi|229166515|ref|ZP_04294268.1| Reticulocyte binding protein [Bacillus cereus AH621]
gi|228616919|gb|EEK73991.1| Reticulocyte binding protein [Bacillus cereus AH621]
Length = 1219
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|428309661|ref|YP_007120638.1| dynamin family protein [Microcoleus sp. PCC 7113]
gi|428251273|gb|AFZ17232.1| dynamin family protein [Microcoleus sp. PCC 7113]
Length = 693
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------------------ 406
F L+++G+ GKS+ +NAL+G+ L V P T +T LR+
Sbjct: 70 FRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTALLTVLRYGSEKKVTVYFNDGRSPEQ 129
Query: 407 --------------SDLASEEQQRCERHPDGQY-ICYLPSPILKEMI-IVDTPGTNVILQ 450
++ EQ++ + P Y + P P+L++ + IVD+PG N
Sbjct: 130 LDFKEFKYKYTIDPAEAKQLEQEKKQAFPGVDYAVVEYPLPLLEKGVEIVDSPGLNDTES 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSD 502
R + L+ ++ +LFV+ A +P T E +L Y + V F++N D
Sbjct: 190 RNE-LSLGYINNCHAILFVLRASQPCTLGERRYLENYIKGRGLTVFFLINAWD 241
>gi|423486786|ref|ZP_17463468.1| hypothetical protein IEU_01409 [Bacillus cereus BtB2-4]
gi|423492510|ref|ZP_17469154.1| hypothetical protein IEW_01408 [Bacillus cereus CER057]
gi|423500699|ref|ZP_17477316.1| hypothetical protein IEY_03926 [Bacillus cereus CER074]
gi|401154985|gb|EJQ62399.1| hypothetical protein IEY_03926 [Bacillus cereus CER074]
gi|401155994|gb|EJQ63401.1| hypothetical protein IEW_01408 [Bacillus cereus CER057]
gi|402438663|gb|EJV70672.1| hypothetical protein IEU_01409 [Bacillus cereus BtB2-4]
Length = 1219
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EITF 403
E++ L +A+++ID+ ++ SGK + L R ++ G N ++T
Sbjct: 697 EIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKGYEAVANHLGEQLQVTL 750
Query: 404 LRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
FSD + E++ C + + Y C L + + +VDTPG + I R + +++
Sbjct: 751 EEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYIKN 807
Query: 463 ADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFV 517
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE ++
Sbjct: 808 ADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEEELEMVKGYI 867
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
+ ++ I N ++ +S+ LE K
Sbjct: 868 ADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|257057424|ref|YP_003135256.1| thiamine-phosphate pyrophosphorylase [Saccharomonospora viridis DSM
43017]
gi|256587296|gb|ACU98429.1| thiamine-phosphate diphosphorylase [Saccharomonospora viridis DSM
43017]
Length = 225
Score = 52.8 bits (125), Expect = 8e-04, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 96 LAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAA-------CLLKSVVKDRALFLIA 148
L GD + +D A+A V IV L + +G + EAA L ++ + AL +
Sbjct: 26 LPHGDLAEFVDAALAGGVDIVQLR--DKTGGAPLEAAQEIEALEILAQACARHGALLAVN 83
Query: 149 ERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSE 208
+R D+A AV+A + L LP VAR + + P++GR+ +L+ A AS E
Sbjct: 84 DRADVALAVDADVLHLGQNDLPVSVARRIIGER-------PVIGRSTHSLEQARAASVEE 136
Query: 209 GADFLVCCFG 218
G D+ C G
Sbjct: 137 GVDYF--CVG 144
>gi|229160623|ref|ZP_04288617.1| Reticulocyte binding protein [Bacillus cereus R309803]
gi|228622822|gb|EEK79654.1| Reticulocyte binding protein [Bacillus cereus R309803]
Length = 1210
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A+SQI++ +I SGK + L R +
Sbjct: 671 KQALLEDMKAVYKL--FHYEITTLDEALSQIEK----IIKYPSPSGKQKTTFSFL--RAV 722
Query: 391 KDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G + ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 723 QKGYDAVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGIALVDTP 779
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 780 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 839
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 840 NAADLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYQDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + + S + + + R + E LL
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPHNEIGNLEALITSIMEEKEQYVRNGMERETEYLLGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ IAE ++ E L ++A ++ + NE I L+
Sbjct: 272 FSFILSENEKHLLKYEEELASPLSIAE-VVEKKEELTETKNREASKESHVRNEFIKGLQ 329
>gi|229010981|ref|ZP_04168176.1| Reticulocyte binding protein [Bacillus mycoides DSM 2048]
gi|228750287|gb|EEM00118.1| Reticulocyte binding protein [Bacillus mycoides DSM 2048]
Length = 1210
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 674 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 725
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 726 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 782
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 783 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 842
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 843 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 33 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 212
>gi|425472518|ref|ZP_18851359.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9701]
gi|389881384|emb|CCI38054.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9701]
Length = 454
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLTTGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L + KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRGAKKPIILVFNKIDLYPEA 184
>gi|404498400|ref|YP_006722506.1| tRNA modification GTPase TrmE [Geobacter metallireducens GS-15]
gi|418067087|ref|ZP_12704439.1| tRNA modification GTPase TrmE [Geobacter metallireducens RCH3]
gi|123570636|sp|Q39PQ9.1|MNME_GEOMG RecName: Full=tRNA modification GTPase MnmE
gi|78195998|gb|ABB33765.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter metallireducens GS-15]
gi|373559448|gb|EHP85745.1| tRNA modification GTPase TrmE [Geobacter metallireducens RCH3]
Length = 457
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 36/196 (18%)
Query: 313 VAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGE 372
V F+ F D E ++ V +EA ++AS +EE+ D + + ++I G+
Sbjct: 175 VEAFIDFPDDE---VDPASRVEIEA--KAREASGRIEELLEGFDEGRVLRDGVSVLIAGK 229
Query: 373 YNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPS 431
N GKSS++N LL KR + V TT +I EE P
Sbjct: 230 PNVGKSSLLNTLLQEKRAIVTSVPGTTRDII---------EEVVNVRGLP---------- 270
Query: 432 PILKEMIIVDTPGT----NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT 487
+ ++DT G +V+ Q RLT E +P+ADL+LFV+ RP + + + L
Sbjct: 271 -----LRMLDTAGIRETEDVVEQEGVRLTLEKIPQADLILFVLDGSRPFDDDDRMIL--A 323
Query: 488 QQWKKKVVFVLNKSDL 503
+++V+ V NKSDL
Sbjct: 324 ALAERRVIVVTNKSDL 339
>gi|423676614|ref|ZP_17651553.1| hypothetical protein IKS_04157 [Bacillus cereus VDM062]
gi|401307735|gb|EJS13160.1| hypothetical protein IKS_04157 [Bacillus cereus VDM062]
Length = 1219
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEEYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|229132481|ref|ZP_04261332.1| Reticulocyte binding protein [Bacillus cereus BDRD-ST196]
gi|423516329|ref|ZP_17492810.1| hypothetical protein IG7_01399 [Bacillus cereus HuA2-4]
gi|228650977|gb|EEL06961.1| Reticulocyte binding protein [Bacillus cereus BDRD-ST196]
gi|401165235|gb|EJQ72554.1| hypothetical protein IG7_01399 [Bacillus cereus HuA2-4]
Length = 1219
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|163939485|ref|YP_001644369.1| dynamin family protein [Bacillus weihenstephanensis KBAB4]
gi|163861682|gb|ABY42741.1| Dynamin family protein [Bacillus weihenstephanensis KBAB4]
Length = 1219
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|427727315|ref|YP_007073552.1| dynamin family protein [Nostoc sp. PCC 7524]
gi|427363234|gb|AFY45955.1| dynamin family protein [Nostoc sp. PCC 7524]
Length = 694
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------------------ 406
F L+++G+ GKS+ +NAL+G+ L V P T +T LR+
Sbjct: 70 FRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGLEKKVTIHFNDGKKPQT 129
Query: 407 --------------SDLASEEQQRCERHPDGQY-ICYLPSPILKEMI-IVDTPGTNVILQ 450
++ EQ++ + PD Y + P +L++ I IVD+PG N
Sbjct: 130 LDFQSFKYKYTIDPAEAKKLEQEKKQAFPDVDYAVVEYPLTLLEKGIEIVDSPGLNDTEA 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSD 502
R + L+ +V +LFV+ A +P T E +L Y + V F++N D
Sbjct: 190 RNE-LSLGYVNNCHAILFVMRASQPCTLGERRYLENYIKGRGLSVFFLINAWD 241
>gi|307150985|ref|YP_003886369.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
gi|306981213|gb|ADN13094.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
Length = 488
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 345 SPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF 403
S L +E+ L++ + ++++ + L G GKSSV+NALLG+ + G +
Sbjct: 60 SGLEQEIDHLVNLLDKLEQSVVQLAAFGMVGRGKSSVLNALLGQEIFQTGPLHGVT---- 115
Query: 404 LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPR 462
R D A+ + + E +P+ Q + S ++ ++DTPG + V + ++ L + +
Sbjct: 116 -RSIDSANWKLIQDETYPEVQRMIISGSGN-SQIQLIDTPGIDEVDGETREALARKIAKQ 173
Query: 463 ADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTM 522
DL+LF+++ D +T+ E L ++ K ++ V NK D Y A L E
Sbjct: 174 VDLILFIVAGD--ITKVEFQALSQLREAGKPMILVFNKIDQYPEADRLAIYEKIRDERVK 231
Query: 523 KLLNIENVTIY---PVSARSTLEA 543
+LL+ + + + P+ A++ EA
Sbjct: 232 ELLSPDEIVMVAACPLVAQAVREA 255
>gi|152975105|ref|YP_001374622.1| dynamin family protein [Bacillus cytotoxicus NVH 391-98]
gi|152023857|gb|ABS21627.1| Dynamin family protein [Bacillus cytotoxicus NVH 391-98]
Length = 1219
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E+S L +A+SQI+ +I SGK + L R +
Sbjct: 680 KQALLEDMKAVYKL--FHYEISTLEEALSQIE----TIIQYPSPSGKQKTTFSFL--RAV 731
Query: 391 KDGVVPTTNE------ITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G N+ +T F+D + E++ C + + Y C L + + +VDTP
Sbjct: 732 QRGYRAVFNQLGEQVQVTVAEFADYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL Q+ ELE ++ E ++ I N ++ +S+ L+ K
Sbjct: 849 NAADLAQSEEELEMVKGYIAEQLLQ-YGIRNPRLFAISSLCALKEK 893
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 132/300 (44%), Gaps = 27/300 (9%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT-----------------FL 404
+E ++ G +++GKS+++N L + L +PT+ +
Sbjct: 41 EEQLMIAFCGHFSAGKSTMMNYLYKAQLLPTSPIPTSANVVKIEKGLDRVIVTLKSGEHY 100
Query: 405 RFSDLASEEQ--QRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
+S + S E+ Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 101 EYSGVYSAEELKQLCKNGDEIIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTL 160
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKE 519
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 161 HLADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFAEYKQSVKQ 220
Query: 520 NTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYS 579
+ + +I+ I+ S R + S S + D H + + E LL
Sbjct: 221 SFLN-WDIQVDGIFYTSLRMMNHPHNEIQSLERLLFSIMKERDQHVKQGMERETEYLLQE 279
Query: 580 FLDGSSSTGKERMR---LKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+L + +++++ +L +P+ ++E + E L+ K + ++ + NE I L+
Sbjct: 280 YLSAILAENEKQLQPFEKELASPLSLSE-VKEKKEMLLEKKQRAIHKESDVRNEFIKGLQ 338
>gi|238794334|ref|ZP_04637946.1| Predicted GTPase (dynamin-related) [Yersinia intermedia ATCC 29909]
gi|238726328|gb|EEQ17870.1| Predicted GTPase (dynamin-related) [Yersinia intermedia ATCC 29909]
Length = 561
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 24/189 (12%)
Query: 339 DVIKKASPLMEEVSLLID--AVSQIDEP-FLLVIVGEYNSGKSSVINALLGKRYLKDGVV 395
+ ++K L++E + D ++Q++ LL ++G +++GKSS++N +G L G+
Sbjct: 10 EYLQKLGTLLQESQISWDRNLLAQVENTQLLLPVIGAFSAGKSSLLNMFMGAPVLPVGIA 69
Query: 396 PTTNEITFLRFSD---------------LASEE-QQRCERHPDGQYI-CYLPSPILKE-- 436
P T T L FS LA EE Q ++ + ++ Y+ SP L+
Sbjct: 70 PETELATELHFSKEPWLQAIRHDGSEDRLAPEELPQVNKKSAEYSHLRLYINSPALEAIA 129
Query: 437 -MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISA-DRPLTESEVVFLRYTQQWKKKV 494
+I+VD PG L+ + ++PR + V S D +T+S + L + ++
Sbjct: 130 PLILVDMPGYGSSLENHNKALSYYLPRGVHFIVVTSVEDGTVTQSMLRNLDNIKTYESDF 189
Query: 495 VFVLNKSDL 503
F+L+K++L
Sbjct: 190 SFILSKTNL 198
>gi|423667353|ref|ZP_17642382.1| hypothetical protein IKO_01050 [Bacillus cereus VDM034]
gi|401304104|gb|EJS09662.1| hypothetical protein IKO_01050 [Bacillus cereus VDM034]
Length = 1219
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EITF 403
E++ L +A+++ID+ ++ SGK + L R ++ G N ++T
Sbjct: 697 EIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKGYEAVANHLGEQLQVTL 750
Query: 404 LRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
FSD + E++ C + + Y C L + + +VDTPG + I R + +++
Sbjct: 751 EEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYIKN 807
Query: 463 ADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFV 517
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE ++
Sbjct: 808 ADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEEELEMVKGYI 867
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
+ ++ I N ++ +S+ LE K
Sbjct: 868 ADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNYLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|425437354|ref|ZP_18817772.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9432]
gi|389677669|emb|CCH93402.1| Genome sequencing data, contig C247 [Microcystis aeruginosa PCC
9432]
Length = 454
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 25/161 (15%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS 407
+++ L A+ ++DE + V G + GKSSV+NAL+G++ L G +
Sbjct: 47 QDLQSLKSALDKLDETVIRVAAFGLVSRGKSSVVNALVGQKVLTTGPL------------ 94
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLV 466
R P + + + P+ ++ ++DTPG + I + + + E ADL+
Sbjct: 95 -------HGVTRWP--RSVRWTPATGKIQIELIDTPGLDEIEGEARANMAREVAKSADLI 145
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
LF+++ D +T +E L + KK ++ V NK DLY A
Sbjct: 146 LFIVAGD--ITRTEYEALGELRGAKKPIILVFNKIDLYPEA 184
>gi|256846153|ref|ZP_05551611.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 3_1_36A2]
gi|256719712|gb|EEU33267.1| thiamine-phosphate pyrophosphorylase [Fusobacterium sp. 3_1_36A2]
Length = 206
Score = 52.8 bits (125), Expect = 9e-04, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+EA+ V I+ L S K + A +K + K LF+I +R+DI A
Sbjct: 19 GKDFYKCIEEAIKGGVKIIQLREKTLSTKDFFIKALKVKEICKSYGVLFIINDRLDITQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATAKNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADVIE------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + + +VKIP+F + + +V G G
Sbjct: 131 AIFGTSTKDNAKKLDMEDLKKIVNSVKIPVFAIGGININNVCMLKNIGLQGLCSV----- 185
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS++ C N
Sbjct: 186 ---SGILSEIDCKKAVEN 200
>gi|229058307|ref|ZP_04196692.1| Reticulocyte binding protein [Bacillus cereus AH603]
gi|228719981|gb|EEL71570.1| Reticulocyte binding protein [Bacillus cereus AH603]
Length = 1210
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 674 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 725
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 726 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 782
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 783 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 842
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 843 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 33 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 212
>gi|111022453|ref|YP_705425.1| hypothetical protein RHA1_ro05487 [Rhodococcus jostii RHA1]
gi|110821983|gb|ABG97267.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 614
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 28/210 (13%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL 390
+ LLE V+ K + L A +++ +P + +V+VG GKS +N+LL
Sbjct: 17 TALLEQALVVAKRFGRGDLAQRLDSARTRVQDPRMRIVVVGPLKQGKSQFVNSLLNLTVC 76
Query: 391 KDGVVPTTNEITFLRFSDLASEE--------------------------QQRCERHPDGQ 424
G TT T ++ +++AS E R E +
Sbjct: 77 SVGDDETTAIPTVVQNAEVASAELLLADPGADPIRVPLPLDELNGITPASPRAEGREVLR 136
Query: 425 YICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
+PSP+L + +++VDTPG T +P +D V + A + TE E+ F
Sbjct: 137 VEVNVPSPLLADGLVLVDTPGVGGAGNPHAASTLGLIPASDAVFVLSDASQEFTEPELGF 196
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+R V +++K+DLY + E+ EA
Sbjct: 197 IRQVTSLCPSVACLISKTDLYPHWREIVEA 226
>gi|398844237|ref|ZP_10601328.1| dynamin family protein [Pseudomonas sp. GM84]
gi|398254745|gb|EJN39811.1| dynamin family protein [Pseudomonas sp. GM84]
Length = 769
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 36/150 (24%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------- 406
L+DA++ + LV++GE++ GKSS++NALLG L + TT TF+R
Sbjct: 48 LLDALNA--DAIRLVVLGEFSRGKSSLVNALLGIELLPTALQATTAINTFIRMLPADRSE 105
Query: 407 -------------------SDLASEE--QQRCERHPDGQ----YI-CYLPSPIL-KEMII 439
DLA E + E H D + YI ++ P+L K +++
Sbjct: 106 RFIRIHFQDGRPVQEVPWSDDLALERWGTELDESHADVRQTLDYIEAFMDHPLLEKGLVL 165
Query: 440 VDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
VDTPG +++ + +T + + A + L+V
Sbjct: 166 VDTPGLETVIKHHEAITRKAIAEAHIALWV 195
>gi|392956023|ref|ZP_10321553.1| Dynamin family protein [Bacillus macauensis ZFHKF-1]
gi|391878265|gb|EIT86855.1| Dynamin family protein [Bacillus macauensis ZFHKF-1]
Length = 1214
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 397 TTNEITFLRFSDLASEEQQRCERHPDGQYI-CYLPSPILKEMIIVDTPGTNVILQRQQRL 455
TT ++ F ++E++ C Y C L + +VDTPG + I R +
Sbjct: 740 TTMVVSVADFQAFVAQEEKACFTESIAVYYDCALTR---MGVTLVDTPGADSINARHTNV 796
Query: 456 TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFEL 510
EF+ +D +L+V + + ++ FL + K K+ F++N +DL Q+ EL
Sbjct: 797 AFEFIKNSDAILYVTYYNHAFSAADREFLIQLGRVKDTFELDKMFFMINAADLAQDEAEL 856
Query: 511 EEAISFVKENTMKLLNIENVTIYPVSARSTL-------EAKLSVSSAVGKDHSE 557
EE S V N ++ I N ++P+S+ L EA +++ G++ +E
Sbjct: 857 EEVTSHVASN-LQQFGIRNPKLFPLSSYYALLAQQNNEEAHRKLTALYGEEENE 909
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 323 EKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDE-PFLLVIVGEYNSGKSSVI 381
EKQ +E E + L +A V+ A L L A S+I + F + + G +++GKSS
Sbjct: 577 EKQDVEQEATTLQKASSVLADAQLLPTIAEALQQASSRITQRSFTVSLFGAFSAGKSSFA 636
Query: 382 NALLGKRYLKDGVVPTTNEI 401
NAL+G++ L PTT I
Sbjct: 637 NALIGEKLLPVSPNPTTATI 656
>gi|423509489|ref|ZP_17486020.1| hypothetical protein IG3_00986 [Bacillus cereus HuA2-1]
gi|402456780|gb|EJV88553.1| hypothetical protein IG3_00986 [Bacillus cereus HuA2-1]
Length = 1219
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 350 EVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN------EITF 403
E++ L +A+++ID+ ++ SGK + L R ++ G N ++T
Sbjct: 697 EIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKGYEAVANHLGEQLQVTL 750
Query: 404 LRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
FSD + E++ C + + Y C L + + +VDTPG + I R + +++
Sbjct: 751 EEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQYIKN 807
Query: 463 ADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFV 517
AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE ++
Sbjct: 808 ADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEEELEMVKGYI 867
Query: 518 KENTMKLLNIENVTIYPVSARSTLEAK 544
+ ++ I N ++ +S+ LE K
Sbjct: 868 ADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|423366591|ref|ZP_17344024.1| hypothetical protein IC3_01693 [Bacillus cereus VD142]
gi|401087748|gb|EJP95950.1| hypothetical protein IC3_01693 [Bacillus cereus VD142]
Length = 1219
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A+++ID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTKIDQ----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
N ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVANHLGEQLQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R D
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|16332122|ref|NP_442850.1| hypothetical protein slr1462 [Synechocystis sp. PCC 6803]
gi|383323865|ref|YP_005384719.1| hypothetical protein SYNGTI_2957 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383327034|ref|YP_005387888.1| hypothetical protein SYNPCCP_2956 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492918|ref|YP_005410595.1| hypothetical protein SYNPCCN_2956 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384438186|ref|YP_005652911.1| hypothetical protein SYNGTS_2958 [Synechocystis sp. PCC 6803]
gi|451816274|ref|YP_007452726.1| hypothetical protein MYO_129870 [Synechocystis sp. PCC 6803]
gi|1653751|dbj|BAA18662.1| slr1462 [Synechocystis sp. PCC 6803]
gi|339275219|dbj|BAK51706.1| hypothetical protein SYNGTS_2958 [Synechocystis sp. PCC 6803]
gi|359273185|dbj|BAL30704.1| hypothetical protein SYNGTI_2957 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359276355|dbj|BAL33873.1| hypothetical protein SYNPCCN_2956 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279525|dbj|BAL37042.1| hypothetical protein SYNPCCP_2956 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960236|dbj|BAM53476.1| hypothetical protein BEST7613_4545 [Bacillus subtilis BEST7613]
gi|451782243|gb|AGF53212.1| hypothetical protein MYO_129870 [Synechocystis sp. PCC 6803]
Length = 561
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 32/144 (22%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
LV+ G ++GK+S++NALLG+ ++ V PT + +A E +Y
Sbjct: 132 LVVFGTGSAGKTSLVNALLGQ--IQGEVAPTMG-------TTIAGE-----------KYY 171
Query: 427 CYLPSPILKEMIIVDTPGTNVILQRQQRLTE------EFVPRADLVLFVISADRPLTESE 480
YL + +++ I DTPG IL+ R TE + ADL+LFV+ D L +SE
Sbjct: 172 LYLDG-VSRDLEITDTPG---ILEAGVRGTERETAARQLATEADLLLFVVDND--LRQSE 225
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLY 504
L+ + K+ + +LNK+DLY
Sbjct: 226 YEPLQALAKIGKRSLLILNKTDLY 249
>gi|336324985|ref|YP_004604951.1| hypothetical protein CRES_0424 [Corynebacterium resistens DSM
45100]
gi|336100967|gb|AEI08787.1| hypothetical protein CRES_0424 [Corynebacterium resistens DSM
45100]
Length = 479
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 332 SVLLEAIDVIKKASP-LMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
++L + I+ + K SP L EE L + VS+ P + +VG SGKS+++NAL +
Sbjct: 12 TLLRQTIEALGKGSPALAEEARELFEMVSR---PPRVAVVGRLKSGKSTLVNALTENKIA 68
Query: 391 KDGVVPTTNEITFLRFSDLASEE----QQRCERHP--DG------------QYI-CYLPS 431
+ T ++ R A E + ER P DG YI YLP+
Sbjct: 69 ATDALECTMTVSIYRNGAPARAEVRGHHGQVERIPLSDGPLTQLPMPLNEVDYIDQYLPN 128
Query: 432 PILKEMIIVDTPGTNVIL----QRQQRL-------TEEFVPRADLVLFVISADRPLTESE 480
L+ + ++DTPGT + R +R+ T AD V+F+ +D E E
Sbjct: 129 ARLERLTLIDTPGTATLTVENEARTKRVLVEGRKDTTRASSWADSVVFL--SDSTPREDE 186
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ L V VL+++D + AF + + + + ++ + +Y V S
Sbjct: 187 LELLSQLGMTPLTTVGVLSRADSFGAGAFGHNDPLDHARSHASRIASELGGAVYTVLPLS 246
Query: 540 TLEAKLS----VSSAVGKDHSELSVNDSHWRINTFDKLE 574
L A+ + V++AV +D + LS D R D LE
Sbjct: 247 GLMAESALTGRVNTAVARDLATLSELD---RDQVLDVLE 282
>gi|427720566|ref|YP_007068560.1| dynamin family protein [Calothrix sp. PCC 7507]
gi|427353002|gb|AFY35726.1| Dynamin family protein [Calothrix sp. PCC 7507]
Length = 692
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 38/170 (22%)
Query: 347 LMEEVSLLIDAVSQID-EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT---NEIT 402
L +++ L+ +S+I+ + F + +VGE+ GKS+ INALLGK L V+PTT N +T
Sbjct: 30 LQKQIQLIDRVISRIETDSFAIAVVGEFKRGKSTFINALLGKEILPADVLPTTATLNRVT 89
Query: 403 F-------LRFSDLASEEQQ---------------RCERHPDG--QYICYLPSPILKEMI 438
+ + F D EE++ CE + + Y P ++ +
Sbjct: 90 YGSEPFVKIIFED--DEEREIDINRLISFVTKLTPECEAVAATVKEAVIYYPVKYCRDHV 147
Query: 439 -IVDTPGTNVILQRQQRLTE---EFVPRADLVLFVISADRPLTESEVVFL 484
I+DTPG L + +T + R ++ + V SA P ESE F+
Sbjct: 148 EIIDTPG----LSDDETMTAVTLAVLERVEVAIMVTSALAPFAESEGNFI 193
>gi|334119287|ref|ZP_08493373.1| HSR1-like GTP-binding protein [Microcoleus vaginatus FGP-2]
gi|333458075|gb|EGK86694.1| HSR1-like GTP-binding protein [Microcoleus vaginatus FGP-2]
Length = 482
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSSV+NALLG+ + G T + D+ + E PD
Sbjct: 75 IAVFGMVGRGKSSVLNALLGQNVFETGPTHGVTRTTTIGQWDVG---EGIDENLPD---- 127
Query: 427 CYLPSPI---LKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
SP+ L ++ ++DTPG + V + ++ L +ADL+LFV++ D +T+ E
Sbjct: 128 --RLSPVIYRLSQVELIDTPGIDEVDGETRELLARRVAKQADLILFVVAGD--ITKVEYA 183
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIY---PVSARS 539
L ++ K ++ V NK D Y +A L + +LL+ + + + P++AR+
Sbjct: 184 ALSQLREAGKPMLLVFNKIDQYPDADRLAIYHKIRDDRVRELLSPDEIVMAAASPLTARA 243
>gi|147679252|ref|YP_001213467.1| tRNA modification GTPase TrmE [Pelotomaculum thermopropionicum SI]
gi|189036204|sp|A5CY46.1|MNME_PELTS RecName: Full=tRNA modification GTPase MnmE
gi|146275349|dbj|BAF61098.1| predicted GTPase [Pelotomaculum thermopropionicum SI]
Length = 459
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 339 DVIKKASPLMEEVSLLI---DAVSQIDEPFLLVIVGEYNSGKSSVINALLGK-RYLKDGV 394
D+++ L+EE+ ++ +A E VI+G N GKSS++NALL + R + +
Sbjct: 192 DILRSGEDLIEEIKEIVRRAEAGKIYREGISTVIIGRPNVGKSSLLNALLRENRAIVTDI 251
Query: 395 VPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQR 454
TT +I +YI P + I+DT G +R
Sbjct: 252 PGTTRDIIE--------------------EYINIRGIP----LKIIDTAGLRETGDAVER 287
Query: 455 L----TEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
+ E V +ADLVL V+ A R LTE + + + KKV+F++NK+D+ +
Sbjct: 288 IGVEKAREAVEQADLVLLVLDAARGLTEEDYAIIE--KVGGKKVIFIVNKADVREKKISS 345
Query: 511 EEA 513
E A
Sbjct: 346 EGA 348
>gi|441501912|ref|ZP_20983925.1| hypothetical protein C942_00108 [Photobacterium sp. AK15]
gi|441430351|gb|ELR67801.1| hypothetical protein C942_00108 [Photobacterium sp. AK15]
Length = 516
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 34/171 (19%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPD 422
EP + +VG+ ++GKSS+INA+ G + V+P+T+E+T RCE D
Sbjct: 282 EPLRIAVVGQVSAGKSSLINAISGNMVAEVQVLPSTDEVTV-----------HRCE--VD 328
Query: 423 GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV- 481
G + +L VD PG + L+ + L ++ +DL+ +V+ A++P + +V
Sbjct: 329 GIDLVHL----------VDLPGIDGSLKTAELLIDQMT-NSDLIFWVVKANQPARKLDVE 377
Query: 482 ------VFLRYTQQWKKK---VVFVLNKSDLYQNAFELEEAISFVKENTMK 523
F + + K+K ++ ++N+ D + E E V+ N+ K
Sbjct: 378 LRKQLDAFYQDEKHLKRKRPMILALVNQVDRLKPTEEWEPPYDIVQPNSAK 428
>gi|307154220|ref|YP_003889604.1| GTP-binding protein HSR1-like protein [Cyanothece sp. PCC 7822]
gi|306984448|gb|ADN16329.1| GTP-binding protein HSR1-related protein [Cyanothece sp. PCC 7822]
Length = 530
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 62/268 (23%)
Query: 327 IETERSVLL-EAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALL 385
+E E +LL AI+ L LL ++ +P + IVG +GKS+++NALL
Sbjct: 7 LENEVELLLTRAINSTANYPALENFHHLLKQCQDRLKQPMRIAIVGVIKAGKSTLMNALL 66
Query: 386 GKRYLKDGVVPTTNEITFLRFSD---LASEEQQRCERHP-----------------DGQY 425
G + + G V T I +LR+ + L + + +R P + QY
Sbjct: 67 GDKVVATGSVEATFNINWLRYGNQPSLKVHFKDQYQRPPETKSIEELTALTLRAKENSQY 126
Query: 426 I-------CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV---------------PRA 463
+ P +LK I+DTPG + + T+EF+ +A
Sbjct: 127 FLSIKYIEVFYPQEMLKIFNIIDTPGLKSFYEEDSKNTQEFLQLCGDELTQVTQEQAAQA 186
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVV---------FVLNKSDLYQNAFELEEAI 514
D VL++ S L +++ V + ++ +V L K D+Y + + + +
Sbjct: 187 DAVLYLFSQAIGLQDAQTV-----EAFQGPLVNNATPINAIGALTKVDMYASDPNITDPM 241
Query: 515 SFVKENTMKLLNIENV-----TIYPVSA 537
+ ++N+ +L+ V TIYP+
Sbjct: 242 AEGEKNSQRLMQNTQVNRLFYTIYPICG 269
>gi|425467076|ref|ZP_18846360.1| GTP-binding protein HSR1-related [Microcystis aeruginosa PCC 9809]
gi|389830248|emb|CCI27935.1| GTP-binding protein HSR1-related [Microcystis aeruginosa PCC 9809]
Length = 536
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 26/150 (17%)
Query: 337 AIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVP 396
A+D PL LL + ++ EP + IVG +GKS+++NALLG+ + G V
Sbjct: 28 ALDRTANLYPLKPFRRLLQQSHQRLQEPMRVAIVGLIKAGKSTLMNALLGQAVVATGSVE 87
Query: 397 TTNEITFLRFSDLAS------EEQQ---------------RCERHPDG----QYI-CYLP 430
T + +L++ + + EQQ R E H D +YI +
Sbjct: 88 ATFNVNWLKYGEKSGLLVHFKNEQQPPEEKSFSQLAALTLRPEEHQDYLLSIKYIEVFHA 147
Query: 431 SPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
+ ILK + I+DTPG N + T++F+
Sbjct: 148 NEILKTLNIIDTPGLNSTYEDDSENTKQFL 177
>gi|254423829|ref|ZP_05037547.1| GTPase, putative [Synechococcus sp. PCC 7335]
gi|196191318|gb|EDX86282.1| GTPase, putative [Synechococcus sp. PCC 7335]
Length = 502
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLK-DGVVPTTNEITFLRFSDLASEEQQRCERHPDG 423
F +V+ G ++GK++++NAL+G+ + + TT T R + A + D
Sbjct: 125 FQIVVFGLGSTGKTALVNALMGEIAGEVAATIGTTQAGTSYRIAIPAESAGNQLGNKKD- 183
Query: 424 QYICYLPSPILKEMIIVDTPG-TNVILQRQQRLTE--EFVPRADLVLFVISADRPLTESE 480
+E+++VDTPG Q + R E +ADL+LFV+ D L +E
Sbjct: 184 -----------RELLLVDTPGLLEFGEQGEARANEAKRLAAKADLLLFVV--DNDLHRAE 230
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENV 530
L + K+ + VLNKSD Y E E+ + + E T LLN E+V
Sbjct: 231 YEPLEMLMRMGKRSLLVLNKSDRYLPT-EKEQILQRLHERTHGLLNSEDV 279
>gi|323140513|ref|ZP_08075440.1| thiamine-phosphate diphosphorylase [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414965|gb|EFY05757.1| thiamine-phosphate diphosphorylase [Phascolarctobacterium
succinatutens YIT 12067]
Length = 211
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 96 LAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKD-RALFLIAERVDIA 154
L G +D + EA+ V +V AS +Y A LK++ +I +R+DIA
Sbjct: 18 LQGRTLIDCVREALEGGVTLVQYRAKTASSAEMYAEALQLKALCDSFNVPLIINDRLDIA 77
Query: 155 AAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV 214
AV A+GV L LP AR + + L+G + A A+ GAD+L
Sbjct: 78 MAVGAAGVHLGQDDLPCAAARKILGEDY-------LIGVSAHN-PAEAKAALQNGADYLG 129
Query: 215 C--CFGEGQKADV 225
C FG KADV
Sbjct: 130 CGAVFGTATKADV 142
>gi|421075034|ref|ZP_15536052.1| Dynamin family protein [Pelosinus fermentans JBW45]
gi|392526926|gb|EIW50034.1| Dynamin family protein [Pelosinus fermentans JBW45]
Length = 1220
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 402 TFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
T FSD + E++ C D Y C L K + +VDTPG + I R + +F+
Sbjct: 764 TITEFSDYVAIEEKSCFVEWIDLYYDCPLTR---KGITLVDTPGADSINARHTGVAFDFI 820
Query: 461 PRADLVLFVISADRPLTESEVVFL----RYTQQWK-KKVVFVLNKSDLYQNAFELEEAIS 515
+D +LFV + ++++ FL R ++ K+ F++N DL N E E
Sbjct: 821 KNSDAILFVTYYNHAFSKADREFLIQLGRVKDSFQLDKMFFMINAIDLADNEEEKETVTL 880
Query: 516 FVKENTMKLLNIENVTIYPVSARSTLEAK 544
+V E +K + N +YP+S+ L+ K
Sbjct: 881 YVHEQLIK-YGVRNPHLYPLSSLQALKEK 908
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------- 408
+E F + G +++GKS++IN L+G+ L +PT+ + ++ +
Sbjct: 46 NEEFAIAFCGHFSAGKSTIINRLVGENLLPSSPIPTSANLVKVKAGEEYVKVFFKKDKPR 105
Query: 409 --LASEEQQRCERH-PDGQYI-----CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
LA + + + + DG I + S + + +I+DTPG + + TE +
Sbjct: 106 LYLAPYDYEMVKNYCKDGDQIQAIEISHSDSQLPSQTVIMDTPGIDSADDAHRIATESAI 165
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
ADL+ +V+ + +E +F + + K+V V+N+ D + N
Sbjct: 166 HLADLIFYVMDYNHVQSELNFMFTKELTEAGKEVYLVINQVDKHSN 211
>gi|421178301|ref|ZP_15635916.1| hypothetical protein PAE2_0362 [Pseudomonas aeruginosa E2]
gi|404548631|gb|EKA57578.1| hypothetical protein PAE2_0362 [Pseudomonas aeruginosa E2]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|452944616|ref|YP_007500781.1| GTP-binding protein Era [Hydrogenobaculum sp. HO]
gi|452883034|gb|AGG15738.1| GTP-binding protein Era [Hydrogenobaculum sp. HO]
Length = 298
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 43/179 (24%)
Query: 369 IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICY 428
IVG+ N+GKSS++NA+LGK+ V T I + +L D Q
Sbjct: 8 IVGKPNAGKSSLLNAILGKKVSIVSNVAGTTRIRVMGVKNLE-----------DAQ---- 52
Query: 429 LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA--------DLVLFVISADRPLTESE 480
+I VDTPG ++R + L EE++ +A D++LFV+ A +TE +
Sbjct: 53 --------IIFVDTPG---FMKRPKDLMEEYMVKAAKESLEDVDVLLFVLDAKTGITEED 101
Query: 481 VVFLRYTQQ--WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
+ + ++ KK++ VLNK D + E+ + ++E + K+ +E I PVSA
Sbjct: 102 LNLFKILKRDYSDKKIIGVLNKID----SISKEQVLELIEEVS-KIFALEE--IVPVSA 153
>gi|421165253|ref|ZP_15623592.1| hypothetical protein PABE177_0415 [Pseudomonas aeruginosa ATCC
700888]
gi|404542471|gb|EKA51789.1| hypothetical protein PABE177_0415 [Pseudomonas aeruginosa ATCC
700888]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|222110043|ref|YP_002552307.1| hypothetical protein Dtpsy_0829 [Acidovorax ebreus TPSY]
gi|221729487|gb|ACM32307.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length = 660
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+F++ AD +T S++
Sbjct: 196 VINIPHPLLKQGLVILDTPGLNAV-GAEPELTINLIPQAHAVVFILGADTGVTRSDLTIW 254
Query: 485 R----YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVS 536
R + + VLNK D + +++ + ++ + +LL + + PVS
Sbjct: 255 RDHLGTAEDATDARLVVLNKIDTLWDTLSSPSQVQAQLERQRQTSAELLGVPLSHVVPVS 314
Query: 537 ARSTLEAKLS 546
A+ L AK++
Sbjct: 315 AQKGLVAKIN 324
>gi|420136968|ref|ZP_14644974.1| hypothetical protein PACIG1_0473 [Pseudomonas aeruginosa CIG1]
gi|421157394|ref|ZP_15616773.1| hypothetical protein PABE173_0402 [Pseudomonas aeruginosa ATCC
25324]
gi|403250273|gb|EJY63723.1| hypothetical protein PACIG1_0473 [Pseudomonas aeruginosa CIG1]
gi|404550655|gb|EKA59382.1| hypothetical protein PABE173_0402 [Pseudomonas aeruginosa ATCC
25324]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMDIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|423481555|ref|ZP_17458245.1| hypothetical protein IEQ_01333 [Bacillus cereus BAG6X1-2]
gi|401144763|gb|EJQ52290.1| hypothetical protein IEQ_01333 [Bacillus cereus BAG6X1-2]
Length = 1219
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 129/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE I+ S R + S S + + + R + E LL
Sbjct: 221 SFSNWDIEVDGIFYTSLRMMNHPYNEIQSLEALIFSIMKEKEQYVRKGMERETEYLLGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ ++E ++ E L A ++ + NE I L+
Sbjct: 281 FSFILSENEKHLMKYEEELTSPLSLSE-IVEKKEELTENKNSAASKESDVRNEFIKGLQ 338
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A++QID+ ++ SGK + L R +
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLEEALTQIDK----IMKYPSPSGKQKTTFSFL--RAV 731
Query: 391 KDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G + ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 732 QKGYEAVADHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|425462472|ref|ZP_18841946.1| GTP-binding protein HSR1-related [Microcystis aeruginosa PCC 9808]
gi|389824477|emb|CCI26532.1| GTP-binding protein HSR1-related [Microcystis aeruginosa PCC 9808]
Length = 536
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 26/150 (17%)
Query: 337 AIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVP 396
A+D PL LL + ++ EP + IVG +GKS+++NALLG+ + G V
Sbjct: 28 ALDRTANLYPLKPFRRLLQQSHQRLQEPMRVAIVGLIKAGKSTLMNALLGQAVVATGSVE 87
Query: 397 TTNEITFLRFSDLA------SEEQQ---------------RCERHPDG----QYI-CYLP 430
T + +L++ + + EQQ R E H D +YI +
Sbjct: 88 ATFNVNWLKYGEKSRLLVHFKNEQQPPEEKSFSQLAALTLRPEEHQDYLLSIKYIEVFHA 147
Query: 431 SPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
+ ILK + I+DTPG N + T++F+
Sbjct: 148 NEILKTLNIIDTPGLNSTYEDDSENTKQFL 177
>gi|298492203|ref|YP_003722380.1| small GTP-binding protein ['Nostoc azollae' 0708]
gi|298234121|gb|ADI65257.1| small GTP-binding protein ['Nostoc azollae' 0708]
Length = 462
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 26/157 (16%)
Query: 350 EVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ LI ++++D + + G + GKS+V+N+LLG++ L+ G + N +T
Sbjct: 51 EIETLIATLNKLDSNVVRIAAFGLVSRGKSAVLNSLLGEKILQTGPL---NGVT------ 101
Query: 409 LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVL 467
+ + P G+ + L +DTPG + I + + ++ + +ADL+L
Sbjct: 102 ---QWPRSVRWKPGGKVLVEL----------IDTPGLDEIEGESRAQMARDVARQADLIL 148
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
FV+S D +T +E L ++ +K ++ V NK DLY
Sbjct: 149 FVVSGD--ITRTEYQGLLELRKAQKPLILVFNKVDLY 183
>gi|34763550|ref|ZP_00144487.1| Thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886780|gb|EAA23916.1| Thiamin-phosphate pyrophosphorylase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 206
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 25/198 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+EA+ V I+ L S K + A +K + K LF+I +R+DI A
Sbjct: 19 GKDFYKCIEEAIKGGVKIIQLREKTLSTKDFFIKALKVKEICKSYGVLFIINDRLDITQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P AR +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAREILKDKF-------LIGATAKNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADV------IENSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDLS 268
FG K + + +VKIP+F + + +V G G + S+
Sbjct: 131 AIFGTSTKDNAKKLDMKDLKKIVNSVKIPVFAIGGININNVWMLKNIGLQG-ICSVS--- 186
Query: 269 LFNDGVLSQMFCANGTTN 286
G+LS++ C N
Sbjct: 187 ----GILSEIDCKKAVEN 200
>gi|75907573|ref|YP_321869.1| dynamin [Anabaena variabilis ATCC 29413]
gi|75701298|gb|ABA20974.1| Dynamin [Anabaena variabilis ATCC 29413]
Length = 693
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------FSDLASE-- 412
F L+++G+ GKS+ +NAL+G+ L V P T +T LR F+D S
Sbjct: 70 FRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGAEKKVTIYFNDGKSPQT 129
Query: 413 --------------------EQQRCERHPDGQY-ICYLPSPILKEMI-IVDTPGTNVILQ 450
EQ++ PD Y + P +L++ I IVD+PG N
Sbjct: 130 LDFPSFKYKYTIDPAEAKKLEQEKKSAFPDVDYAVVEYPLSLLEKGIEIVDSPGLNDTEA 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSD 502
R + L+ +V +LFV+ A +P T E +L Y + V F++N D
Sbjct: 190 RNE-LSLGYVNNCHAILFVMRASQPCTLGERRYLENYIKGRGLSVFFLINAWD 241
>gi|205373729|ref|ZP_03226532.1| dynamin family protein [Bacillus coahuilensis m4-4]
Length = 444
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 12/115 (10%)
Query: 435 KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK--- 491
K M +VDTPG + I R ++ +++ +D +LFV + P ++++ FL + K
Sbjct: 25 KGMTLVDTPGADSINSRHTDVSFDYIRNSDAILFVTYYNHPFSKADREFLIQLGRVKETL 84
Query: 492 --KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLL---NIENVTIYPVSARSTL 541
K + F+LN DL +N +E ++FVKE + L I++ +IY VS+R +L
Sbjct: 85 NNKSMFFILNAIDLAEN----DEELTFVKEYVARELVKFGIQSPSIYGVSSRESL 135
>gi|107099376|ref|ZP_01363294.1| hypothetical protein PaerPA_01000388 [Pseudomonas aeruginosa PACS2]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|416113888|ref|ZP_11593537.1| Putative ATP /GTP binding protein [Campylobacter concisus UNSWCD]
gi|384578374|gb|EIF07640.1| Putative ATP /GTP binding protein [Campylobacter concisus UNSWCD]
Length = 693
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 44/248 (17%)
Query: 339 DVIKKASPLMEEVSLL---IDAVSQIDEP-FLLVIVGEYNSGKSSVINALLGKRYLKDGV 394
++ KKAS L E + L + A + +E F + G NSGKS+++NALL K L
Sbjct: 140 EINKKASLLDSEKTFLEALVAAKKRSNETLFNIAASGVINSGKSTLLNALLNKSVLGASN 199
Query: 395 VPTTNEITFLRFS------------------------------DLASEEQQRCERHPDG- 423
VP T +T L++S D+ EE +
Sbjct: 200 VPETINLTILKYSKDSFARVNFYTLDELLALGIPSENLPSKSVDIGIEEIKNYTSSSSKT 259
Query: 424 -----QYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLT 477
Y +LK+ + I+DTPG + + ++++T F+ + DL+ +++A + T
Sbjct: 260 ANLVKSVELYDDLELLKDNVCIIDTPGIDDAVVLREQITTNFMKKCDLLAHLMNASQSAT 319
Query: 478 ESEVVFLRYTQQWKK--KVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPV 535
+ + +FL+ + ++ VL +D +A EL E +++ K+ + +N + + +
Sbjct: 320 QKDALFLKKCLENSHIVRLAVVLTHADEL-SAKELNETLNYTKKAIGEQINGVEIDYFAL 378
Query: 536 SARSTLEA 543
SA+S LE
Sbjct: 379 SAKSYLEG 386
>gi|121593322|ref|YP_985218.1| hypothetical protein Ajs_0900 [Acidovorax sp. JS42]
gi|120605402|gb|ABM41142.1| conserved hypothetical protein [Acidovorax sp. JS42]
Length = 660
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+F++ AD +T S++
Sbjct: 196 VINIPHPLLKQGLVILDTPGLNAV-GAEPELTINLIPQAHAVVFILGADTGVTRSDLTIW 254
Query: 485 R----YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVS 536
R + + VLNK D + +++ + ++ + +LL + + PVS
Sbjct: 255 RDHLGTAEDATDARLVVLNKIDTLWDTLSSPSQVQAQLERQRQTSAELLGVPLSHVVPVS 314
Query: 537 ARSTLEAKLS 546
A+ L AK++
Sbjct: 315 AQKGLVAKIN 324
>gi|443323313|ref|ZP_21052321.1| small G protein, GTPase SAR1 [Gloeocapsa sp. PCC 73106]
gi|442787051|gb|ELR96776.1| small G protein, GTPase SAR1 [Gloeocapsa sp. PCC 73106]
Length = 483
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
G GKSS++NALLG+ + G + +++ + L+ E + Q I L
Sbjct: 78 GMVGRGKSSILNALLGEPVFQTGALHGVTQVSTSKHWQLSQENLAESD-----QEIQKLT 132
Query: 431 SPILKE--MIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT 487
P L + + ++DTPG + V + ++ L + +ADL+L +I+ D LT+ E L
Sbjct: 133 IPGLGKSSVELIDTPGIDEVDGETREALARDIAKQADLILMIIAGD--LTKVEYQALCEL 190
Query: 488 QQWKKKVVFVLNKSDLYQNA 507
+++ K ++ V NK D Y A
Sbjct: 191 REFGKPILLVFNKIDQYPEA 210
>gi|15595588|ref|NP_249082.1| hypothetical protein PA0391 [Pseudomonas aeruginosa PAO1]
gi|418588382|ref|ZP_13152394.1| hypothetical protein O1O_26821 [Pseudomonas aeruginosa MPAO1/P1]
gi|418593460|ref|ZP_13157305.1| hypothetical protein O1Q_22418 [Pseudomonas aeruginosa MPAO1/P2]
gi|421515006|ref|ZP_15961692.1| hypothetical protein A161_02000 [Pseudomonas aeruginosa PAO579]
gi|9946244|gb|AAG03780.1|AE004476_10 hypothetical protein PA0391 [Pseudomonas aeruginosa PAO1]
gi|375040778|gb|EHS33510.1| hypothetical protein O1O_26821 [Pseudomonas aeruginosa MPAO1/P1]
gi|375047551|gb|EHS40095.1| hypothetical protein O1Q_22418 [Pseudomonas aeruginosa MPAO1/P2]
gi|404348734|gb|EJZ75071.1| hypothetical protein A161_02000 [Pseudomonas aeruginosa PAO579]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|218889132|ref|YP_002437996.1| hypothetical protein PLES_03881 [Pseudomonas aeruginosa LESB58]
gi|254237374|ref|ZP_04930697.1| hypothetical protein PACG_03448 [Pseudomonas aeruginosa C3719]
gi|254243490|ref|ZP_04936812.1| hypothetical protein PA2G_04306 [Pseudomonas aeruginosa 2192]
gi|386056459|ref|YP_005972981.1| hypothetical protein PAM18_0390 [Pseudomonas aeruginosa M18]
gi|421151456|ref|ZP_15611070.1| hypothetical protein PABE171_0413 [Pseudomonas aeruginosa ATCC
14886]
gi|126169305|gb|EAZ54816.1| hypothetical protein PACG_03448 [Pseudomonas aeruginosa C3719]
gi|126196868|gb|EAZ60931.1| hypothetical protein PA2G_04306 [Pseudomonas aeruginosa 2192]
gi|218769355|emb|CAW25115.1| hypothetical protein PLES_03881 [Pseudomonas aeruginosa LESB58]
gi|347302765|gb|AEO72879.1| hypothetical protein PAM18_0390 [Pseudomonas aeruginosa M18]
gi|404527360|gb|EKA37524.1| hypothetical protein PABE171_0413 [Pseudomonas aeruginosa ATCC
14886]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|414078071|ref|YP_006997389.1| GTP-binding protein [Anabaena sp. 90]
gi|413971487|gb|AFW95576.1| GTP-binding protein [Anabaena sp. 90]
Length = 486
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSDLASEEQQRCERHPDGQYICYL 429
G GKSS++NAL+G+ G + T + + +S SEE G L
Sbjct: 87 GMVGRGKSSLLNALVGQEVFITGPLHGVTRDAQTVNWS--ISEEAL-------GTLKATL 137
Query: 430 PSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ 488
PS ++ ++DTPG + V + + L E+ +ADL+LFVIS D +T+ E + L +
Sbjct: 138 PSNGQSQVELIDTPGLDEVDGETRAALAEQIAKQADLILFVISGD--MTKIEQIALSQLR 195
Query: 489 QWKKKVVFVLNKSDLY 504
+ K ++ V NK D Y
Sbjct: 196 EVGKPIILVFNKVDQY 211
>gi|398844238|ref|ZP_10601329.1| dynamin family protein [Pseudomonas sp. GM84]
gi|398254746|gb|EJN39812.1| dynamin family protein [Pseudomonas sp. GM84]
Length = 740
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 351 VSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF---- 406
V L V + P LV++G ++ GKSS++N LL L+ + TT TF+ +
Sbjct: 23 VEALAADVLHANTPLRLVLLGGFSVGKSSLLNMLLQAPLLQTALEETTALPTFIEYAAER 82
Query: 407 ---------SDLASEEQQRCE---RHPDGQYICY---LPSPILKEMIIVDTPGTNVILQR 451
S L ++ Q P+G +C LP P LK + I+D PG
Sbjct: 83 SMSLIGPDGSQLPLDDAQFAHVTTHAPEG-AVCAVLNLPQPWLKGVSIIDLPGLGSTSAH 141
Query: 452 QQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELE 511
+ T V AD VL+++S P + +++ L+ QQ K+V ++ D E+E
Sbjct: 142 HREYTLTQVRHADAVLYLLSPRGP-SAADMETLQIIQQAGKRVKVLVTHWD------EVE 194
Query: 512 EAIS 515
AI+
Sbjct: 195 AAIA 198
>gi|340054616|emb|CCC48916.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 892
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVP-TTNEITFLRFSDLASEEQQRCERHPDGQY 425
+V+VG+ +GKSS++NALLG++ K P TT +I+F + ++ EE QR + G
Sbjct: 240 IVLVGKACAGKSSLLNALLGQQVAKTSSTPHTTRKISF--YQSVSPEEMQRF-LNVKGNG 296
Query: 426 ICYLPSPILKEMIIVDTPGTNV-ILQRQQR-----LTEEF--VPRA-DLVLFVISADRPL 476
+ LP L ++ VD PG + + Q R LT+ + V R+ + VLF I +R L
Sbjct: 297 LVKLPGGGL-QLTFVDVPGFGIEGMSDQWRDKTIALTDAYLGVRRSVNTVLFCIDCERGL 355
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSD 502
T+ ++ + + + VL K D
Sbjct: 356 TKVDLRYFTWLENLHGVFFVVLTKCD 381
>gi|428215389|ref|YP_007088533.1| dynamin family protein [Oscillatoria acuminata PCC 6304]
gi|428003770|gb|AFY84613.1| dynamin family protein [Oscillatoria acuminata PCC 6304]
Length = 692
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 36/173 (20%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRF------------------ 406
F L+++G+ GKS+ +NAL+G+ L V P T +T LR+
Sbjct: 70 FRLLVLGDMKRGKSTFLNALIGENILPSDVNPCTALLTVLRYGPEKKVTVYFKDGKSPQT 129
Query: 407 --------------SDLASEEQQRCERHPDGQY-ICYLPSPILKEMI-IVDTPGTNVILQ 450
S+ EQ + + PD Y + P +L++ + IVD+PG N
Sbjct: 130 LDFKSFKQNYTIPPSEAKQLEQNQQQAFPDVDYAVLEYPLSLLQKGVEIVDSPGLNDTES 189
Query: 451 RQQRLTEEFVPRADLVLFVISADRPLTESEVVFL-RYTQQWKKKVVFVLNKSD 502
R + L+ ++ +LFV+ A +P T E +L Y + V F++N D
Sbjct: 190 RNE-LSLGYINNCHAILFVMRASQPCTLGERRYLENYIKGRGLSVFFLINAWD 241
>gi|421061426|ref|ZP_15523756.1| small GTP-binding protein, partial [Pelosinus fermentans B3]
gi|392449854|gb|EIW26941.1| small GTP-binding protein, partial [Pelosinus fermentans B3]
Length = 457
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
++E F + G +++GKS++IN L+G+ L +PT+ + ++ +
Sbjct: 45 VNEEFAIAFCGHFSAGKSTIINRLVGENLLPSSPIPTSANLVKVKAGEEYVKVFFKKGKP 104
Query: 409 ---LASEEQQRCERH-PDGQYI-----CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
LA + + + DG I + S + + +I+DTPG + + TE
Sbjct: 105 RLYLAPYDYNMVKNYCKDGDQIQSIEISHSDSQLPSQTVIMDTPGIDSADDAHRIATESA 164
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+ ADL+ +V+ + +E +F + + K+V V+N+ D + N
Sbjct: 165 IHLADLIFYVMDYNHVQSELNFMFTKELTEAGKEVYLVINQVDKHSN 211
>gi|392962567|ref|ZP_10328003.1| Dynamin family protein [Pelosinus fermentans DSM 17108]
gi|421053947|ref|ZP_15516918.1| Dynamin family protein [Pelosinus fermentans B4]
gi|421065289|ref|ZP_15527068.1| Dynamin family protein [Pelosinus fermentans A12]
gi|421073538|ref|ZP_15534609.1| Dynamin family protein [Pelosinus fermentans A11]
gi|392441149|gb|EIW18789.1| Dynamin family protein [Pelosinus fermentans B4]
gi|392444566|gb|EIW22001.1| Dynamin family protein [Pelosinus fermentans A11]
gi|392452410|gb|EIW29358.1| Dynamin family protein [Pelosinus fermentans DSM 17108]
gi|392459289|gb|EIW35713.1| Dynamin family protein [Pelosinus fermentans A12]
Length = 1218
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD------------ 408
++E F + G +++GKS++IN L+G+ L +PT+ + ++ +
Sbjct: 45 VNEEFAIAFCGHFSAGKSTIINRLVGENLLPSSPIPTSANLVKVKAGEEYVKVFFKKGKP 104
Query: 409 ---LASEEQQRCERH-PDGQYI-----CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
LA + + + DG I + S + + +I+DTPG + + TE
Sbjct: 105 RLYLAPYDYNMVKNYCKDGDQIQSIEISHSDSQLPSQTVIMDTPGIDSADDAHRIATESA 164
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+ ADL+ +V+ + +E +F + + K+V V+N+ D + N
Sbjct: 165 IHLADLIFYVMDYNHVQSELNFMFTKELTEAGKEVYLVINQVDKHSN 211
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 402 TFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEF 459
T FSD + E++ C D Y C P+ + I +VDTPG + I R + +F
Sbjct: 764 TVTEFSDYVAIEEKSCFVEWIDLYYDC----PLTRSGITLVDTPGADSINARHTGVAFDF 819
Query: 460 VPRADLVLFVISADRPLTESEVVFL----RYTQQWK-KKVVFVLNKSDLYQNAFELEEAI 514
+ +D +LFV + ++++ FL R ++ K+ F++N DL N + E
Sbjct: 820 IKNSDAILFVTYYNHAFSKADREFLIQLGRVKDSFQLDKMFFMINAIDLADNEEDKETVT 879
Query: 515 SFVKENTMKLLNIENVTIYPVSARSTLEAK 544
+V E +K + N +YP+S+ L+ K
Sbjct: 880 LYVHEQLIK-YGVRNPHLYPLSSLQALKEK 908
>gi|56963498|ref|YP_175229.1| thiamine-phosphate pyrophosphorylase [Bacillus clausii KSM-K16]
gi|81822134|sp|Q5WH87.1|THIE_BACSK RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|56909741|dbj|BAD64268.1| thiamine-phosphate pyrophosphorylase [Bacillus clausii KSM-K16]
Length = 209
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAA 156
G D +++++EA+ V I+ L +S K+V E A LK + D + F++ + +D+A A
Sbjct: 17 GRDVVEVMEEAIQGGVDIIQLRDKTSSKKAVLEKARRLKKLAADYGIPFIVNDHIDVALA 76
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVC- 215
V+ASGV + LP R + ++G + L+ A A + GAD++
Sbjct: 77 VDASGVHVGQDDLPLPEVRKLLGPD-------KIIGVSTHKLEEALEAEKN-GADYIGVG 128
Query: 216 -CFGEGQKADVIE-------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLEDL 267
F KADV++ + +V IP + +V + +++GA + E +
Sbjct: 129 PIFPTNSKADVVDPVTTAYIREVKEHVTIPFVAIGGIKRHNVREVIEAGAEAICVITEIV 188
Query: 268 SLFNDGVLSQMFCA 281
+ + SQ A
Sbjct: 189 AARDVKAASQALLA 202
>gi|389728863|ref|ZP_10189217.1| hypothetical protein UU5_04846 [Rhodanobacter sp. 115]
gi|388441265|gb|EIL97556.1| hypothetical protein UU5_04846 [Rhodanobacter sp. 115]
Length = 451
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 28/173 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G ++GKSS+ NALLG GV+ T D E DG
Sbjct: 76 VAVFGRVSAGKSSLANALLGHEAFAVGVLHGTTTQAAQATLD---------EAQHDG--- 123
Query: 427 CYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
++++DTPG N + + +++L + DLV+FV D LT E+ L+
Sbjct: 124 ----------LVLIDTPGINELDGEAREKLAFDVAEICDLVIFVCDGD--LTREELDALK 171
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
++ ++ LNK+D Y +A E + + +++ T LL ++V V+AR
Sbjct: 172 TLAATQRPLLLALNKADRY-SAAERVDLLDHLRQRTQGLLRAQDV--LAVAAR 221
>gi|116054121|ref|YP_788564.1| hypothetical protein PA14_05110 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296386889|ref|ZP_06876388.1| hypothetical protein PaerPAb_02097 [Pseudomonas aeruginosa PAb1]
gi|313111989|ref|ZP_07797776.1| hypothetical protein PA39016_004070011 [Pseudomonas aeruginosa
39016]
gi|355646683|ref|ZP_09054556.1| hypothetical protein HMPREF1030_03642 [Pseudomonas sp. 2_1_26]
gi|386068700|ref|YP_005984004.1| hypothetical protein NCGM2_5808 [Pseudomonas aeruginosa NCGM2.S1]
gi|392981803|ref|YP_006480390.1| hypothetical protein PADK2_01965 [Pseudomonas aeruginosa DK2]
gi|416857324|ref|ZP_11912655.1| hypothetical protein PA13_12390 [Pseudomonas aeruginosa 138244]
gi|416875945|ref|ZP_11918979.1| hypothetical protein PA15_12890 [Pseudomonas aeruginosa 152504]
gi|419755873|ref|ZP_14282225.1| hypothetical protein CF510_22954 [Pseudomonas aeruginosa
PADK2_CF510]
gi|421172112|ref|ZP_15629892.1| hypothetical protein PACI27_0369 [Pseudomonas aeruginosa CI27]
gi|424943194|ref|ZP_18358957.1| hypothetical protein NCGM1179_4383 [Pseudomonas aeruginosa
NCMG1179]
gi|451983841|ref|ZP_21932110.1| hypothetical protein PA18A_1216 [Pseudomonas aeruginosa 18A]
gi|115589342|gb|ABJ15357.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|310884278|gb|EFQ42872.1| hypothetical protein PA39016_004070011 [Pseudomonas aeruginosa
39016]
gi|334840790|gb|EGM19435.1| hypothetical protein PA13_12390 [Pseudomonas aeruginosa 138244]
gi|334841410|gb|EGM20040.1| hypothetical protein PA15_12890 [Pseudomonas aeruginosa 152504]
gi|346059640|dbj|GAA19523.1| hypothetical protein NCGM1179_4383 [Pseudomonas aeruginosa
NCMG1179]
gi|348037259|dbj|BAK92619.1| hypothetical protein NCGM2_5808 [Pseudomonas aeruginosa NCGM2.S1]
gi|354828403|gb|EHF12525.1| hypothetical protein HMPREF1030_03642 [Pseudomonas sp. 2_1_26]
gi|384397535|gb|EIE43946.1| hypothetical protein CF510_22954 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317308|gb|AFM62688.1| hypothetical protein PADK2_01965 [Pseudomonas aeruginosa DK2]
gi|404538339|gb|EKA47882.1| hypothetical protein PACI27_0369 [Pseudomonas aeruginosa CI27]
gi|451758493|emb|CCQ84633.1| hypothetical protein PA18A_1216 [Pseudomonas aeruginosa 18A]
gi|453045769|gb|EME93487.1| hypothetical protein H123_13215 [Pseudomonas aeruginosa PA21_ST175]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|53804290|ref|YP_113852.1| hypothetical protein MCA1394 [Methylococcus capsulatus str. Bath]
gi|53758051|gb|AAU92342.1| hypothetical protein MCA1394 [Methylococcus capsulatus str. Bath]
Length = 543
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQRCER 419
I P ++ G GKSS++N L G + GV PT+ E++ L + E R +R
Sbjct: 50 IHRPLVIGFFGGTGVGKSSLLNRLAGAAIARVGVERPTSREVS------LYAHESVRLDR 103
Query: 420 HP-----DGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
P D + + + L+ ++ +D P + + L ++P DL+++V+S +R
Sbjct: 104 FPPDLPLDRIRLAHHHNDTLRRLVWIDMPDIDSTETANRELALRWIPHIDLLIYVVSPER 163
Query: 475 PLTESEVVFL---RYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
+ L R T W FV+N+ D + + ++++ ++ +K +
Sbjct: 164 YRDDCGWAMLMEQRGTHAW----AFVMNQWD-HGDPVQIQDFLALLKNS 207
>gi|152983501|ref|YP_001345885.1| hypothetical protein PSPA7_0490 [Pseudomonas aeruginosa PA7]
gi|452879369|ref|ZP_21956480.1| hypothetical protein G039_23323 [Pseudomonas aeruginosa VRFPA01]
gi|150958659|gb|ABR80684.1| hypothetical protein PSPA7_0490 [Pseudomonas aeruginosa PA7]
gi|452184061|gb|EME11079.1| hypothetical protein G039_23323 [Pseudomonas aeruginosa VRFPA01]
Length = 655
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A +LF++SAD +T S++ ++ +Y Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAILFLLSADAGVTASDMEIWQKYIQP 258
Query: 490 WKK----KVVFVLNKSDLYQNAFE----LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
++ + VLNK D+ + ++ AI +++ T + L ++ + P+SA+ L
Sbjct: 259 LREDGHSSLFAVLNKIDVLWDDLSGERFVQNAIRLIQDGTARQLGLQRGDVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
AK+ A+
Sbjct: 319 LAKVRGEPAL 328
>gi|428305907|ref|YP_007142732.1| dynamin family protein [Crinalium epipsammum PCC 9333]
gi|428247442|gb|AFZ13222.1| Dynamin family protein [Crinalium epipsammum PCC 9333]
Length = 868
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS----------------- 407
F + +VGE++ GKS+++NALLG+ +P + +T L++
Sbjct: 264 FRIAVVGEFSKGKSTLLNALLGEEIQPVRDIPCSGTVTILKYGAQRRVICRYKDKNRLEE 323
Query: 408 DLASEEQQR----CERHPDGQYICYLPSPILKEMI--------------IVDTPGTNVIL 449
+++ E+ Q E G L + + E++ I+D+PG N +
Sbjct: 324 EISPEQYQEKASISEEAALGSAEDGLANSEIAEIVFEHPELELCRNGVEIIDSPGLNEVA 383
Query: 450 QRQQRLTEEFVPRADLVLFVISADRPLTESE-------VVFLRYT-QQWKKKVVFVLNKS 501
+R +TE+ + AD V+F+ SA LTE E L Y + K + V+N
Sbjct: 384 ERT-LVTEQVLKTADAVIFLTSAQNTLTEKERELLLYLKKELNYAPDEGAKNIFIVVNFF 442
Query: 502 DLY---QNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
DL ++ ++ + + + T ++N EN I+ +SA+STL+A L
Sbjct: 443 DLLRREESRKQVRQRVEKIVNGTNPIINGEN-RIHFISAQSTLDAIL 488
>gi|344942046|ref|ZP_08781334.1| hypothetical protein Mettu_2365 [Methylobacter tundripaludum SV96]
gi|344263238|gb|EGW23509.1| hypothetical protein Mettu_2365 [Methylobacter tundripaludum SV96]
Length = 642
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 29/146 (19%)
Query: 417 CERHPDGQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
C RH + P P+LKE + I+DTPG N L + LT +P A ++FV++AD
Sbjct: 191 CWRHA----LISFPHPLLKEGLSILDTPGLNA-LGTEPELTLSMLPNAQAIIFVLAADTG 245
Query: 476 LTESEVVFLRYTQQW-----------KKKVVFVLNKSDLYQNAFELEEAI-----SFVKE 519
+T+S++ + W K+ + V+NK D + E S +K
Sbjct: 246 VTKSDL------EMWHNHVCHNRGGSKQGLAVVMNKIDAMWDDLADENGYDDSIRSQIKT 299
Query: 520 NTMKLLNIENVTIYPVSARSTLEAKL 545
+ L ENV I+PVSA+ L AK+
Sbjct: 300 SATTLKVNENV-IFPVSAKQALLAKV 324
>gi|310642474|ref|YP_003947232.1| hypothetical protein [Paenibacillus polymyxa SC2]
gi|386041543|ref|YP_005960497.1| hypothetical protein PPM_2853 [Paenibacillus polymyxa M1]
gi|309247424|gb|ADO56991.1| hypothetical protein PPSC2_c3030 [Paenibacillus polymyxa SC2]
gi|343097581|emb|CCC85790.1| uncharacterized protein YpbR [Paenibacillus polymyxa M1]
Length = 1222
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 400 EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
++ ++ D + E++ C H D Y C L + +++VDTPG + + R +T
Sbjct: 763 QVNLEQYRDFVASERKSCFVEHIDLYYDCTLTR---QGIVLVDTPGADSVNARHTGVTFN 819
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKK-----KVVFVLNKSDLYQNAFELEEA 513
++ AD ++FV + T+ + FL + K+ + F++N SDL + EL
Sbjct: 820 YMKHADALVFVTYYNHAFTQGDRQFLNQLGRVKETLALNQTFFIVNASDLASSEDELYSV 879
Query: 514 ISFVKENTMKLLNIENVTIYPVSARSTLEA 543
V+E ++ I IY +S+ LEA
Sbjct: 880 TQHVQEQ-LQANGIRKPRIYSLSSMLALEA 908
>gi|39998554|ref|NP_954505.1| tRNA modification GTPase TrmE [Geobacter sulfurreducens PCA]
gi|409913904|ref|YP_006892369.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter sulfurreducens KN400]
gi|81700815|sp|Q746Q3.1|MNME_GEOSL RecName: Full=tRNA modification GTPase MnmE
gi|39985501|gb|AAR36855.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter sulfurreducens PCA]
gi|298507496|gb|ADI86219.1| tRNA (5-carboxymethylaminomethyl-U34) modification GTPase
[Geobacter sulfurreducens KN400]
Length = 456
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 341 IKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTN 399
++KA+ + E+ D + E ++I G+ N GKSS++N LL KR + V TT
Sbjct: 197 VRKAAETVGELIAGFDEGRVLREGVAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTR 256
Query: 400 EITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
+I EE I LP ++ I DT +++ + RLT E
Sbjct: 257 DII---------EEVVN---------IRGLPLRMIDTAGIRDTE--DIVEKEGVRLTLEK 296
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+P ADLVL VI RPL E + + L + K+++ V NK DL
Sbjct: 297 IPEADLVLLVIDGSRPLDEDDRMIL--SALAGKRLILVENKCDL 338
>gi|282902056|ref|ZP_06309953.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
gi|281193052|gb|EFA68052.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
Length = 452
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 344 ASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT 402
AS + ++ +L + ++D + + G + GKS+V+N+LLG++ L+ G + N +T
Sbjct: 45 ASLIKPQMEILNATLHKLDSNLIKIAAFGLVSRGKSAVLNSLLGEKILETGPL---NGVT 101
Query: 403 FLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVP 461
+ R R G +C + ++DTPG + I + + +
Sbjct: 102 ----------QWPRSLRWQSGTKVC---------VELIDTPGLDEINGEFRGEMARTVAQ 142
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D +T +E L +Q +K ++ V NK DLY
Sbjct: 143 QADLILFVVSGD--ITRTEYQALLELRQAQKPLILVFNKIDLY 183
>gi|301053206|ref|YP_003791417.1| GTPase, GTP1/OBG family [Bacillus cereus biovar anthracis str. CI]
gi|300375375|gb|ADK04279.1| possible GTPase, GTP1/OBG family [Bacillus cereus biovar anthracis
str. CI]
Length = 1219
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L I + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCAL---IRQGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|423435155|ref|ZP_17412136.1| hypothetical protein IE9_01336 [Bacillus cereus BAG4X12-1]
gi|401125393|gb|EJQ33153.1| hypothetical protein IE9_01336 [Bacillus cereus BAG4X12-1]
Length = 1219
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+D + + +L +P+ I+E + E K+ ++A ++ + NE I L+
Sbjct: 281 FSFIDSENEKALLKYEEELASPLSISEVVEKKKELTEAKN-REASKESHVRNEFIKGLQ 338
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|432333399|ref|ZP_19585181.1| hypothetical protein Rwratislav_01917 [Rhodococcus wratislaviensis
IFP 2016]
gi|430779676|gb|ELB94817.1| hypothetical protein Rwratislav_01917 [Rhodococcus wratislaviensis
IFP 2016]
Length = 614
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL 390
++L +A+DV K+ + L A +++ +P + +V+VG GKS +N+LL
Sbjct: 18 ALLEQALDVAKRFG-RGDLAQRLDSARTRVQDPRMRIVVVGPLKQGKSQFVNSLLNLTVC 76
Query: 391 KDGVVPTTNEITFLRFSDLASEE--------------------------QQRCERHPDGQ 424
G TT T ++ ++ AS E R E +
Sbjct: 77 SVGDDETTAIPTVVQNAETASAELLLADPGADPIRVPLPLDELNGITPASPRAEGREVLR 136
Query: 425 YICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
+PSP+L + +++VDTPG T +P +D V + A + TE E+ F
Sbjct: 137 VEVNVPSPLLADGLVLVDTPGVGGAGNPHAASTLGLIPASDAVFVLSDASQEFTEPELGF 196
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+R V +++K+DLY + E+ EA
Sbjct: 197 IRQVTSLCPSVACLISKTDLYPHWREIVEA 226
>gi|423544949|ref|ZP_17521307.1| hypothetical protein IGO_01384 [Bacillus cereus HuB5-5]
gi|401183124|gb|EJQ90241.1| hypothetical protein IGO_01384 [Bacillus cereus HuB5-5]
Length = 1219
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 129/301 (42%), Gaps = 31/301 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------------- 405
E ++ G +++GKS+++N L + L +PT+ + +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGLDRVVVTVKSGEQYE 101
Query: 406 ----FSDLASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
+S A E +Q C+ + G +I +PI + +++VDTPG + Q TE
Sbjct: 102 YDGAYS--AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATEST 159
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVK 518
+ AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK
Sbjct: 160 LHLADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVK 219
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL- 577
+ + +IE +Y S R + + S + + + R + E LL
Sbjct: 220 Q-SFSNWDIEVDGVYYTSLRMMNHPHNEIGNLESLISSIMEEKEQYVRTGMERETEYLLG 278
Query: 578 --YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSL 635
+SF+ + + +L +P+ I E ++ E L ++A ++ + NE I L
Sbjct: 279 EHFSFILSENEKDLLKYEEELASPLSILE-VVEKKEELTETKKREASKESHVKNEFIKGL 337
Query: 636 K 636
+
Sbjct: 338 Q 338
>gi|419963327|ref|ZP_14479303.1| hypothetical protein WSS_A14454 [Rhodococcus opacus M213]
gi|414571260|gb|EKT81977.1| hypothetical protein WSS_A14454 [Rhodococcus opacus M213]
Length = 614
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL 390
++L +A+DV K+ + L A +++ +P + +V+VG GKS +N+LL
Sbjct: 18 ALLEQALDVAKRFG-RGDLAQRLDSARTRVQDPRMRIVVVGPLKQGKSQFVNSLLNLTVC 76
Query: 391 KDGVVPTTNEITFLRFSDLASEE--------------------------QQRCERHPDGQ 424
G TT T ++ ++ AS E R E +
Sbjct: 77 SVGDDETTAIPTVVQNAETASAELLLADPGADPIRVPLPLDELNGITPASPRAEGREVLR 136
Query: 425 YICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
+PSP+L + +++VDTPG T +P +D V + A + TE E+ F
Sbjct: 137 VEVNVPSPLLADGLVLVDTPGVGGAGNPHAASTLGLIPASDAVFVLSDASQEFTEPELGF 196
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+R V +++K+DLY + E+ EA
Sbjct: 197 IRQVTSLCPSVACLISKTDLYPHWREIVEA 226
>gi|297584333|ref|YP_003700113.1| Dynamin family protein [Bacillus selenitireducens MLS10]
gi|297142790|gb|ADH99547.1| Dynamin family protein [Bacillus selenitireducens MLS10]
Length = 1199
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 426 ICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I Y S + K+ I +VDTPG N I R + + + +D + F+ + ++++ F+
Sbjct: 763 IVYYDSDLTKQGITLVDTPGVNSIHSRHTKTALKQINHSDAIFFLTYYNHAFSKADQYFI 822
Query: 485 RYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ K+ F++N SDL + ELE VK ++ N ++ I +S++S
Sbjct: 823 EQLGEINASSSMDKLYFIINASDLASDDTELESVRQHVKSELIRTGN-KDAIISTLSSKS 881
Query: 540 TLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYS----FLDGSSSTGKERMRL 594
L AK++ + +DH + +S++R ++L++L + F + G+E + L
Sbjct: 882 GLYAKINKT----EDHHGFAEFESYFRKRMMNQLKRLSFDQTVFFFERYQEKGEEWLAL 936
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 360 QIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI-----------TFLRFSD 408
Q++ F + G +++GKS+++N L+G+ L VPT+ + FL S+
Sbjct: 29 QVNPGFEIAFCGHFSAGKSTLLNTLMGEELLPVSPVPTSANVIQIKNGETGLQVFLNHSE 88
Query: 409 LASEEQQRC------ERHPDGQYICYL----PSPILK-EMIIVDTPGTNVILQRQQRLTE 457
Q E +G I +L P P + + I+DTPG + Q +T
Sbjct: 89 EVEAFHQEIPWNKVREWGRNGADIHHLEVSFPLPWMSGDSGILDTPGVDSTDPEHQNVTI 148
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISF 516
+ + D+V++V+ + +E+ + FL+ +K ++ V+N+ D + + LEE S
Sbjct: 149 DQLYTTDMVVYVMDYNHVQSETNLTFLKQLTNERKPLLIVINQIDKHVEQELGLEEFRSS 208
Query: 517 VKE 519
VK+
Sbjct: 209 VKK 211
>gi|428215391|ref|YP_007088535.1| dynamin family protein [Oscillatoria acuminata PCC 6304]
gi|428003772|gb|AFY84615.1| dynamin family protein [Oscillatoria acuminata PCC 6304]
Length = 556
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 40/246 (16%)
Query: 341 IKKASPLMEEVSLLIDAVSQIDEP-FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
+ K+ PL ++ + +A ++ P F + + G +N GKS+++NALLG+R L ++PTT
Sbjct: 22 LDKSLPLYQDSLTICEA---LENPVFRIAVFGPFNYGKSTLLNALLGQRTLPIDLIPTTG 78
Query: 400 EITFLRFSDLASE------------------------EQQRCERHPDGQYICYLPSPILK 435
+R+ + S +Q R R+ + + P L+
Sbjct: 79 AAIHVRYGEELSAKITLNDGQVMTDRGTAILKQYAILDQDRRMRNDVAEVEVFCPHSFLQ 138
Query: 436 EMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK--- 491
+ +D PGTN + Q L + ADLV+ V+ A + +T E LR W
Sbjct: 139 IGVEFLDLPGTN-DREEQDNLVRTQLLTADLVVQVLDARKLMTLGERENLR---DWLLDR 194
Query: 492 --KKVVFVLNKSDLY--QNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSV 547
+ VVF +N +L + E+ + FV E+ L +Y V A L A+L
Sbjct: 195 GIETVVFAVNFMNLMDPDDQKEVSSRMRFVAESFRSNLPPGISNLYRVDALPALRARLKG 254
Query: 548 SSAVGK 553
+A +
Sbjct: 255 DAAAAQ 260
>gi|422575491|ref|ZP_16651032.1| ATP/GTP-binding family protein [Propionibacterium acnes HL001PA1]
gi|314923748|gb|EFS87579.1| ATP/GTP-binding family protein [Propionibacterium acnes HL001PA1]
Length = 621
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFV 469
+ + R + S I + + I+D P + ++ + L + + ADL +FV
Sbjct: 114 PTLVRSRVASNDASSLQLVAESRIPRGLAILDAPDIDSVVTHNRDLAAQLLQAADLWIFV 173
Query: 470 ISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
SA R FL Q+ V V ++
Sbjct: 174 TSAARYADAVPWDFLSEAQERHASVAVVCDR 204
>gi|296129196|ref|YP_003636446.1| hypothetical protein Cfla_1349 [Cellulomonas flavigena DSM 20109]
gi|296021011|gb|ADG74247.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
Length = 566
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 354 LIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRF---SDL 409
L+ ++++ P ++V+ G +GKS+++N+L+G+ GV+ PTT E + +DL
Sbjct: 80 LVPRLTELSAPAVVVVAGSTGAGKSTLVNSLVGREVTAAGVLRPTTREPVLVHHPLDTDL 139
Query: 410 ASEEQQRCERHP-----DGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
S HP D + +P + + I+D P + +L + + AD
Sbjct: 140 LSH-------HPVLDEVDAVAVDTVP----RGIAILDAPDLDSVLDSNRDTAHRLLEAAD 188
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
L LFV +A R LR + V VLN+
Sbjct: 189 LWLFVTTASRYGDALPWQVLRSAVERSTSVAMVLNR 224
>gi|423524527|ref|ZP_17501000.1| hypothetical protein IGC_03910 [Bacillus cereus HuA4-10]
gi|401170370|gb|EJQ77611.1| hypothetical protein IGC_03910 [Bacillus cereus HuA4-10]
Length = 1219
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 334 LLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG 393
LLE + + K E++ L +A++QID+ ++ SGK + L R ++ G
Sbjct: 683 LLEDMKAVYKM--FHYEIATLEEALTQIDK----IMKYPSPSGKQKTTFSFL--RAVQKG 734
Query: 394 VVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTN 446
+ ++T FSD + E++ C + + Y C L + + +VDTPG +
Sbjct: 735 YEAVADHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGAD 791
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
I R + +++ AD +LFV + + ++ FL + K K+ F++N +
Sbjct: 792 SINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAA 851
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL Q+ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 852 DLAQSEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E +L G +++GKS+++N L + L +PT+ N + R S+
Sbjct: 42 EQLMLAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSNRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ-NAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D ++ N EE VK++
Sbjct: 162 LADIIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKANELSFEEYRDSVKQS 221
>gi|424825536|ref|ZP_18250523.1| putative GTP-binding protein EngA [Chlamydophila abortus LLG]
gi|333410635|gb|EGK69622.1| putative GTP-binding protein EngA [Chlamydophila abortus LLG]
Length = 474
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL +R + D V TT + + +S H
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNVPGTTRDNIDILYS------------H 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTM 522
L + KK + ++NK DL ++ +E I ++ M
Sbjct: 312 KRILSLISKQKKPHIILVNKWDLIEDV-RMEHYIRDLRATDM 352
>gi|427417814|ref|ZP_18907997.1| small GTP-binding protein [Leptolyngbya sp. PCC 7375]
gi|425760527|gb|EKV01380.1| small GTP-binding protein [Leptolyngbya sp. PCC 7375]
Length = 474
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICY-- 428
G GKSS++NAL+G+ G + + D+AS + Q + +
Sbjct: 77 GMVGRGKSSLLNALIGQSIFITGPLHGVTQ-------DVASVDWQSVSKDSSIHRVSIGD 129
Query: 429 LPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT 487
+ ++DTPG + V +++Q L E ++DL+LFVISAD LT+ E L +
Sbjct: 130 KAGNTGASVELIDTPGIDEVGGEQRQLLAERVAQQSDLILFVISAD--LTQVEYDALGWL 187
Query: 488 QQWKKKVVFVLNKSDLYQNAFELEEAISFVKE 519
+ K ++ V NK+D Y LEE +K+
Sbjct: 188 RHAGKPILLVFNKADQY----SLEEQTLLLKK 215
>gi|334132956|ref|ZP_08506711.1| Conserved hypothetical protein, Putative GTPase [Methyloversatilis
universalis FAM5]
gi|333441866|gb|EGK69838.1| Conserved hypothetical protein, Putative GTPase [Methyloversatilis
universalis FAM5]
Length = 650
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 22/141 (15%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ LP P+L++ ++I+DTPG N I + LT +P A VLFV+ D +T+S++
Sbjct: 194 VINLPHPLLRQGLVILDTPGLNAI-GAEPELTLSLLPAAHAVLFVLGMDTGVTQSDLGV- 251
Query: 485 RYTQQWKKKV----------VFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
WK V + VLNK D + ++E I E+ L+I
Sbjct: 252 -----WKTHVTAAGGSRQGRIAVLNKMDSLWDGLRSEAQIEAEIQRQIESCAVTLDIPAS 306
Query: 531 TIYPVSARSTLEAKLSVSSAV 551
++PVSA+ L A++ A+
Sbjct: 307 RVFPVSAQKGLLARIQHDDAL 327
>gi|228926701|ref|ZP_04089769.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832814|gb|EEM78383.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 1210
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE I + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDIKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 193
>gi|229069222|ref|ZP_04202513.1| Reticulocyte binding protein [Bacillus cereus F65185]
gi|228713974|gb|EEL65858.1| Reticulocyte binding protein [Bacillus cereus F65185]
Length = 1210
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRTGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+D + + +L +P+ I+E + E K+ ++A ++ + NE I L+
Sbjct: 272 FSFIDSENEKALLKYEEELASPLSISEVVEKKKELTEAKN-REASKESHVRNEFIKGLQ 329
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
>gi|407455763|ref|YP_006734654.1| GTP-binding domain-containing protein [Chlamydia psittaci GR9]
gi|405782306|gb|AFS21055.1| small GTP-binding domain protein [Chlamydia psittaci GR9]
Length = 474
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL +R + D V TT + + +S H
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNVPGTTRDNIDILYS------------H 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTM 522
L + KK + ++NK DL + +E I ++ M
Sbjct: 312 KRILSLISKQKKPHIILVNKWDLIE-GVRMEHYIRDLRATDM 352
>gi|397735848|ref|ZP_10502534.1| hypothetical protein JVH1_7094 [Rhodococcus sp. JVH1]
gi|396928141|gb|EJI95364.1| hypothetical protein JVH1_7094 [Rhodococcus sp. JVH1]
Length = 614
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYL 390
+ LLE V+ K + L A +++ +P + +V+VG GKS +N+LL
Sbjct: 17 TALLEQALVVAKRFGRGDLAQRLDSARTRVQDPRMRIVVVGPLKQGKSQFVNSLLNLTVC 76
Query: 391 KDGVVPTTNEITFLRFSDLASEE--------------------------QQRCERHPDGQ 424
G TT T ++ ++ AS E R E +
Sbjct: 77 SVGDDETTAIPTVVQNAETASAELLLADPGADPIRVPLPLDELNGITPASPRAEGREVLR 136
Query: 425 YICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
+PSP+L + +++VDTPG T +P +D V + A + TE E+ F
Sbjct: 137 VEVNVPSPLLADGLVLVDTPGVGGAGNPHAASTLGLIPASDAVFVLSDASQEFTEPELGF 196
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
+R V +++K+DLY + E+ EA
Sbjct: 197 IRQVTSLCPSVACLISKTDLYPHWREIVEA 226
>gi|196033499|ref|ZP_03100911.1| conserved hypothetical protein [Bacillus cereus W]
gi|195993933|gb|EDX57889.1| conserved hypothetical protein [Bacillus cereus W]
Length = 1219
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE I + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDIKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|300869566|ref|ZP_07114147.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332434|emb|CBN59345.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 524
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 26/144 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S+INAL+G+ + G T E+ YI
Sbjct: 114 VVVFGTGSAGKTSLINALVGRMAGQVGAPMGTTEV--------------------GETYI 153
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
L + +E++I DTPG + +++ L + ADL+LFV+ D L +SE
Sbjct: 154 LKLKG-LDREILIADTPGILEAGIAGTQREELARQLATEADLLLFVLDND--LRKSEYEP 210
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNA 507
LR + K+ + V NK+DLY ++
Sbjct: 211 LRTLAEIGKRSLVVFNKTDLYPDS 234
>gi|209542554|ref|YP_002274783.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
gi|209530231|gb|ACI50168.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
Length = 297
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 40/181 (22%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ IVG N+GKS+++N + G + V P F L E Q
Sbjct: 7 FVAIVGAPNAGKSTLLNRMAGAKL--SIVSPKAQTTRFRVLGILMRGESQ---------- 54
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR-------ADLVLFVISADRPLTE 478
+++VDTPG I Q +++L V AD+ L ++ A R L+E
Sbjct: 55 -----------ILLVDTPG---IFQPRRKLDRAMVAAAWTGAEDADITLLLVDARRGLSE 100
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
S + Q +++V VLNK+DL +A+ + LL++E+V Y VSAR
Sbjct: 101 SVRAIVERLAQSRRRVWLVLNKTDLVDR-----QALLPLTAELSALLDVEHV--YMVSAR 153
Query: 539 S 539
S
Sbjct: 154 S 154
>gi|162147936|ref|YP_001602397.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
gi|161786513|emb|CAP56095.1| putative GTP-binding protein era homolog [Gluconacetobacter
diazotrophicus PAl 5]
Length = 305
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 40/181 (22%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ IVG N+GKS+++N + G + V P F L E Q
Sbjct: 15 FVAIVGAPNAGKSTLLNRMAGAKL--SIVSPKAQTTRFRVLGILMRGESQ---------- 62
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR-------ADLVLFVISADRPLTE 478
+++VDTPG I Q +++L V AD+ L ++ A R L+E
Sbjct: 63 -----------ILLVDTPG---IFQPRRKLDRAMVAAAWTGAEDADITLLLVDARRGLSE 108
Query: 479 SEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
S + Q +++V VLNK+DL +A+ + LL++E+V Y VSAR
Sbjct: 109 SVRAIVERLAQSRRRVWLVLNKTDLVDR-----QALLPLTAELSALLDVEHV--YMVSAR 161
Query: 539 S 539
S
Sbjct: 162 S 162
>gi|119511717|ref|ZP_01630821.1| Small GTP-binding protein domain protein [Nodularia spumigena
CCY9414]
gi|119463626|gb|EAW44559.1| Small GTP-binding protein domain protein [Nodularia spumigena
CCY9414]
Length = 449
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 25/135 (18%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
G + GKS+V+NALLG++ L+ G + N +T + + P G+
Sbjct: 67 GLVSRGKSAVLNALLGEKILQTGPL---NGVT---------QWPRSVRWQPGGK------ 108
Query: 431 SPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
+L E+I DTPG + I + ++ E +ADL+LFV+S D +T +E L ++
Sbjct: 109 --VLVELI--DTPGLDEIGGDTRAKMAREVTRQADLILFVVSGD--ITRTEYRGLLELRK 162
Query: 490 WKKKVVFVLNKSDLY 504
+K ++ V NK DLY
Sbjct: 163 AQKPLILVFNKIDLY 177
>gi|453066504|gb|EMF07433.1| GTPase family protein [Serratia marcescens VGH107]
Length = 291
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 51/251 (20%)
Query: 363 EPFLLVIVGEYNSGKSSVINALL-GKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP 421
EP ++ I+G+ GKSS+ NAL G+ V T ++ RF +
Sbjct: 36 EP-VIGIMGKTGVGKSSLCNALFQGEVTPVSDVAACTRDVLRFRFRN------------- 81
Query: 422 DGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLT---EEFVPRADLVLFVISAD-RPLT 477
G + ++IVD PG QR + T +P DLVL+VI AD R L+
Sbjct: 82 -GNH----------SLMIVDLPGVGESKQRDEEYTALYRRILPEMDLVLWVIKADDRALS 130
Query: 478 ESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
E + + ++++V+FV+N++D K N + P S
Sbjct: 131 VDEYFYHKVMLAYQRRVLFVVNQAD---------------KAAPCHQWNTTSNKPSP-SQ 174
Query: 538 RSTLEAKLSVSSAVGKDHSELSV--NDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLK 595
+ST+EAK S + H +SV + W ++ +E +++S D ++S ++ +
Sbjct: 175 QSTIEAKRSAVQQLFLPHHPVSVISAQTGWGLDAM--VETMMHSLPDRATSPLTTQLHGR 232
Query: 596 LET-PIRIAER 605
L T P++ R
Sbjct: 233 LCTEPVKKQAR 243
>gi|409991968|ref|ZP_11275187.1| small GTP-binding protein [Arthrospira platensis str. Paraca]
gi|409937162|gb|EKN78607.1| small GTP-binding protein [Arthrospira platensis str. Paraca]
Length = 465
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 21/142 (14%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP---DG 423
+ + G GKSS++NALLG+ G T+ IT + E P +G
Sbjct: 68 IAVFGMVGRGKSSILNALLGQTVFATG---PTHGIT------------RTTEAKPWQVEG 112
Query: 424 QYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ + S + ++ ++DTPG + V Q ++++ + +ADL+LFVI+ D +T+ E
Sbjct: 113 ENLTGAMSYRISQVELIDTPGIDEVDGQTREQMARQVAEKADLLLFVIAGD--ITQVEYQ 170
Query: 483 FLRYTQQWKKKVVFVLNKSDLY 504
L + + K ++ V NK D Y
Sbjct: 171 ALSWLRDAGKPMLLVFNKIDQY 192
>gi|297625997|ref|YP_003687760.1| ABC transporter [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921762|emb|CBL56320.1| ABC transporter [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 620
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 334 LLEAIDVIKKASPLMEEVS-LLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKD 392
L +A D ++A+ + +++ ++ ++ ID P L V+ G +GKS+++N+L+G+ +
Sbjct: 40 LADAPDRERQAAAMAAQLTDYVLPRLANIDAPLLAVVGGSTGAGKSTLVNSLIGRTVSRA 99
Query: 393 GVV-PTT-------NEITFLRFSD---LASEEQQRCERHPDGQYICYLPSPILKE-MIIV 440
GV+ PTT N F+D L + E Q + +P P L + + ++
Sbjct: 100 GVIRPTTRSPLLVHNPADAAWFTDDRILPGLVRTTVE-SVGAQSLQLVPEPTLPQGLALL 158
Query: 441 DTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
D P + ++ + L + + ADL LFV SA R +L + V V ++
Sbjct: 159 DAPDIDSVVADNRALAGQLLESADLWLFVTSAARYADAVPWSYLTRAAERGAAVAVVCDR 218
Query: 501 SDLYQNAFELEEAISFVKENTMKLLNIENVT---IYPVSARSTLEA 543
EA+ V + +L++ + + ++PV +TL+A
Sbjct: 219 VP--------PEAMREVPADLARLMSAQGLADAPLFPVP-ETTLDA 255
>gi|403737902|ref|ZP_10950630.1| hypothetical protein AUCHE_05_03100 [Austwickia chelonae NBRC
105200]
gi|403192014|dbj|GAB77400.1| hypothetical protein AUCHE_05_03100 [Austwickia chelonae NBRC
105200]
Length = 570
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 358 VSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSDLAS----- 411
++ ++ P L V+ G +GKS+++N+L K + GV+ PTT D S
Sbjct: 55 LADLEAPMLAVVGGSTGAGKSTLVNSLSRKPVTRTGVLRPTTRACVLAHHVDDGSWFEGP 114
Query: 412 ------EEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRAD 464
E + E H D + + +P L + + ++D P + +++ + L+ + + AD
Sbjct: 115 RVLPGLERVEGTEDHHDPRTLRLAQAPGLPQGVALLDAPDIDSVVEANRDLSRQMLAAAD 174
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKL 524
L +FV +A R LR V VLN+ E A+S V ++ L
Sbjct: 175 LWIFVTTATRYADAVPWELLRQAADHGPSVAIVLNR-------VPPESAVS-VGDHLSGL 226
Query: 525 LNIENVTIYPV 535
L E + PV
Sbjct: 227 LAREGLRSAPV 237
>gi|333922684|ref|YP_004496264.1| thiamine-phosphate pyrophosphorylase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333748245|gb|AEF93352.1| Thiamine-phosphate pyrophosphorylase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 216
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAA 156
G D+I +A+ ++ L E GK + LL+ + ++ + F++ +RVD+A A
Sbjct: 21 GRSTEDVIRQAILGGATVIQLREKEYCGKELIRVGKLLRDMTREMGVTFIVNDRVDVAFA 80
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADF--LV 214
V+A GV L LP VAR + +VG + +D A+ + GAD+ L
Sbjct: 81 VDADGVHLGQDDLPIEVARQILGPD-------KIVGISAGNMDEVL-AAQARGADYVGLG 132
Query: 215 CCFGEGQKADVIENSLFTNVK-------IPIFIMNASPLVDVSKFLKSGASGF-----VI 262
F G K+D E VK IP+ + + ++ +++GA+G V+
Sbjct: 133 PVFATGTKSDAGEAVGLDLVKQVCARATIPVVGIGGIKANNAAQVIEAGAAGVSVITAVV 192
Query: 263 SLEDLS 268
S +D++
Sbjct: 193 SADDVT 198
>gi|186686358|ref|YP_001869554.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
gi|186468810|gb|ACC84611.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 517
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NA++G+ + T ++ G+
Sbjct: 134 VVVFGTGSAGKTSLVNAIMGRMVGQVDAPMGTTQV---------------------GETY 172
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
C + ++++I DTPG V ++++ E ADL+LFV+ D L SE
Sbjct: 173 CLRLKGLERKILITDTPGILEAGVAGTEREQMARELATEADLLLFVV--DNDLRRSEYEP 230
Query: 484 LRYTQQWKKKVVFVLNKSDLYQN 506
LR + K+ + VLNK+DLY +
Sbjct: 231 LRGLAEIGKRSLLVLNKTDLYTD 253
>gi|160941470|ref|ZP_02088805.1| hypothetical protein CLOBOL_06361 [Clostridium bolteae ATCC
BAA-613]
gi|158435616|gb|EDP13383.1| hypothetical protein CLOBOL_06361 [Clostridium bolteae ATCC
BAA-613]
Length = 459
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 65/255 (25%)
Query: 346 PLMEEVSLLI---DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT 402
P++ EV L+ D + E VI+G+ N+GKSS++N LLG+ + +V
Sbjct: 201 PMIGEVRKLLLSADDGRVMSEGVKTVILGKPNAGKSSLMNVLLGE---ERAIV------- 250
Query: 403 FLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPR 462
+++A + E H YL L +VDT G R TE+ V +
Sbjct: 251 ----TEIAGTTRDTLEEH------IYLQGISLN---VVDTAGI--------RDTEDVVEK 289
Query: 463 ------------ADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFEL 510
ADL+++V+ RPL ES+ + + + +K + +LNKSDL +L
Sbjct: 290 IGVDRAMKAARDADLIIYVVDGSRPLDESDREIIEFIRD--RKTIVLLNKSDL-----DL 342
Query: 511 EEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGK--DHSELSVNDSHWRIN 568
E T +L I + PVSA+ +L + + K H +LS ND + N
Sbjct: 343 EVG-------TAELEQICGHKVLPVSAKEEQGIEL-LEQEIKKLFYHGDLSFNDQVYITN 394
Query: 569 TFDK--LEKLLYSFL 581
K LE+ L S L
Sbjct: 395 ARHKEALEQCLESLL 409
>gi|403382436|ref|ZP_10924493.1| thiamine-phosphate pyrophosphorylase [Paenibacillus sp. JC66]
Length = 209
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 94 QVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVV-KDRALFLIAERVD 152
Q G D +++++EA+ V I+ L S + + A L+ + K LF++ + +D
Sbjct: 13 QFHPGRDVIEVMEEAILGGVDIIQLRDKTGSKRDILHKARKLRELTRKHDVLFIVNDHID 72
Query: 153 IAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADF 212
IA A +A G+ L LP AR M + ++G + ++ A A+ EGAD+
Sbjct: 73 IALASDADGIHLGQDDLPLAEARKIMGNK--------IIGISTHAIEEA-RAAEREGADY 123
Query: 213 LVC--CFGEGQKADVIE-------NSLFTNVKIPIFIMNASPLVDVSKFLKSGAS 258
+ F K DV++ + ++IP + L +V + L +GA+
Sbjct: 124 IGVGPVFPTKSKLDVVDPVTTSYVREVAGEIRIPFVAIGGIKLHNVDQVLDAGAT 178
>gi|271501406|ref|YP_003334431.1| GTP-binding protein HSR1-like protein [Dickeya dadantii Ech586]
gi|270344961|gb|ACZ77726.1| GTP-binding protein HSR1-related protein [Dickeya dadantii Ech586]
Length = 291
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 33/176 (18%)
Query: 363 EPFLLVIVGEYNSGKSSVINALL-GKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP 421
EP ++ I+G+ +GKSS+ NAL G V T E LR S RH
Sbjct: 36 EP-VIGIIGKTGAGKSSLCNALFKGDVSAVSDVSACTREPLRLRIS---------VGRH- 84
Query: 422 DGQYICYLPSPILKEMIIVDTPGTNVILQRQQ---RLTEEFVPRADLVLFVISA-DRPLT 477
+ +VD PG L R + +L +E++PR DLVL+VI A DR L+
Sbjct: 85 --------------SLTLVDLPGVGESLTRDREYRQLYQEWLPRLDLVLWVIKADDRALS 130
Query: 478 ESEVVFLRYT-QQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTI 532
E + + + + KV+FV+N++D + E + + M+ LNI++ I
Sbjct: 131 IDEQFYRQVIGEAHRHKVLFVVNQADKIEPCHEWDSLTG--SPSAMQYLNIQSRLI 184
>gi|336235166|ref|YP_004587782.1| dynamin family protein [Geobacillus thermoglucosidasius C56-YS93]
gi|335362021|gb|AEH47701.1| Dynamin family protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 1228
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 342 KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI 401
KKA L+E+ + +E F + G +++GKSS+INALLG+ L +PT+ +
Sbjct: 34 KKAKQLLEKAA---------NEQFAIAFCGHFSAGKSSMINALLGEPLLPSSPIPTSANL 84
Query: 402 -----------TFLRFSDLASEE--------QQRCERHPDGQYI-----CYLPSPILKEM 437
F + A E +C+ DG I C + I +
Sbjct: 85 VKVKSGQESIRVFYKHEPPAEYEPPYDLELIHAQCK---DGDAIEFIEVCRQTASIPNGV 141
Query: 438 IIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
+I+DTPG + + TE + AD+V +++ + E F + + K + V
Sbjct: 142 VIMDTPGIDSTDDAHRLATESALHLADVVFYMMDYNHVQAELNFQFTKELTGYGKTLYLV 201
Query: 498 LNKSDLYQN 506
+N+ D +++
Sbjct: 202 INQIDKHRD 210
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 425 YICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
Y C L + + +VDTPG + I R + E++ AD +LFV + ++++ FL
Sbjct: 788 YDCALTR---RGITLVDTPGADSINARHTGVAFEYIKNADAILFVTYYNHAFSKADREFL 844
Query: 485 RYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ K K+ F++N +DL + EL + +V+E + I +Y +S+R
Sbjct: 845 IQLGRVKDTFALDKMFFIVNAADLAHSPEELNAVLEYVEEQ-LAQFGIRFPRLYALSSRF 903
Query: 540 TLEAK 544
L+ K
Sbjct: 904 ALDEK 908
>gi|374606795|ref|ZP_09679617.1| dynamin, partial [Paenibacillus dendritiformis C454]
gi|374387555|gb|EHQ59055.1| dynamin, partial [Paenibacillus dendritiformis C454]
Length = 604
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 33/190 (17%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP 421
D +L G +++GKS+VIN L G L +PT+ + +R+ +E +R
Sbjct: 52 DGTIILAFCGHFSAGKSTVINRLCGAELLPSSPIPTSANVVTVRYGKRRAEIMRR----- 106
Query: 422 DGQYICYLPSPI------------------------LKE-MIIVDTPGTNVILQRQQRLT 456
DG+ + PI LKE ++DTPG + + T
Sbjct: 107 DGEQASVVSVPIEQLAEVCRDGAAVERVYLYNEADWLKEGAALLDTPGVDSADPAHREAT 166
Query: 457 EEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISF 516
E + AD+V +V + +E F + K +++++N+ D ++ E E A
Sbjct: 167 EAAMHLADVVFYVTDYNHVQSEYNFAFAKEVADAGKPLIWIVNQIDKHR---EREIAFDV 223
Query: 517 VKENTMKLLN 526
+++ + L+
Sbjct: 224 YRDDVKRALD 233
>gi|301100502|ref|XP_002899341.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104258|gb|EEY62310.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 577
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 38/168 (22%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQR-------CER 419
++++G+Y+ GK+S I LLGK + V P E T RF + E++R C
Sbjct: 79 VLMIGQYSVGKTSFIEYLLGKPFPGQRVGP---EPTTDRFVAVMHGEEERTVPGNAACV- 134
Query: 420 HPDGQY---------------ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE------ 458
PD Y + LP+P+L ++ IVDTPG ++ +QR++
Sbjct: 135 SPDLPYGGLSMFGTAFLNKFEVAQLPAPLLSQLTIVDTPG--ILSGEKQRISRGYDFTQV 192
Query: 459 ---FVPRADLVLFVISADR-PLTESEVVFLRYTQQWKKKVVFVLNKSD 502
F R+DL+L + A + +++ + Q KV VLNK+D
Sbjct: 193 ARWFAERSDLILLLFDAHKLDISDEFQRVIEVLQGQSDKVRCVLNKAD 240
>gi|241762755|ref|ZP_04760819.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
gi|241368174|gb|EER62366.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
Length = 588
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 36/200 (18%)
Query: 303 TSNSFFGKERVAGFVKFEDREKQLIETERSVLLEAID----VIKKASPLMEEVSLLIDAV 358
T N + KE+ + K + + VL +A + ++ +A ++ E++ L A+
Sbjct: 7 TRNKLYLKEKGSNMTKAQQNYLDFLAAIERVLKKAGNDLPILLGEAGRVLPEIAGLQSAI 66
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE 418
Q + L+ +VG +++GKSS++NAL+G L + P T T LR+ + ++R E
Sbjct: 67 RQCE--LLVPVVGAFSAGKSSLLNALVGAELLPVAITPETAMPTELRYDN-----RERLE 119
Query: 419 -RHPDGQY----ICYLPS-----------------PILKE---MIIVDTPGTNVILQRQQ 453
DGQ + LPS P LK +++VD PG N L
Sbjct: 120 VVFLDGQTQEFPLGALPSLPSRAQEIELVRLYAERPALKALQPLVLVDMPGFNSPLDVHN 179
Query: 454 RLTEEFVPRADLVLFVISAD 473
R ++ + LFV+S +
Sbjct: 180 RAIAHYIGQGAHYLFVVSVE 199
>gi|111022436|ref|YP_705408.1| hypothetical protein RHA1_ro05470 [Rhodococcus jostii RHA1]
gi|110821966|gb|ABG97250.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 581
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTT----NEITFLRFSDLASEEQQRCERHPD 422
+V++G + G SSV AL+ D V +T +E + + +AS D
Sbjct: 63 VVVLGLTDKGVSSVAGALV------DADVSSTAQSRHEAVVVEYGPVAS----------D 106
Query: 423 GQYICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
LP +L E +++VD PG + + T VP AD VLFV A + TE E+
Sbjct: 107 SDSTVTLPHDLLAEGLVLVDAPGFSGHAPARAADTLALVPTADAVLFVSDASQEYTEPEI 166
Query: 482 VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIE-NVTIYPVS---- 536
L V+ V+NK D Y ++++A N L N + + + PVS
Sbjct: 167 ALLTQVHTLCPMVICVVNKIDFYPRWADIQKA------NRTHLQNADLPLPLLPVSALMH 220
Query: 537 --ARSTLEAKLSVSSAV 551
AR T + L V S +
Sbjct: 221 ADARETGDDALDVESGI 237
>gi|14521295|ref|NP_126770.1| thiamine-phosphate pyrophosphorylase [Pyrococcus abyssi GE5]
gi|13633984|sp|Q9UZQ5.1|THIE_PYRAB RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|5458513|emb|CAB50001.1| thiE thiamine phosphate pyrophosphorylase [Pyrococcus abyssi GE5]
gi|380741869|tpe|CCE70503.1| TPA: thiamine-phosphate pyrophosphorylase [Pyrococcus abyssi GE5]
Length = 207
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 122 EASGKSVYEAACLLKSVVKDR-ALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKD 180
+AS K +YE ++ + ++ ALF + +R+D+A AVNA GV L + +P VAR +
Sbjct: 41 DASTKEMYEVGKEIRRLTQEYDALFFVDDRIDVALAVNADGVQLGPEDMPIEVAREIAPN 100
Query: 181 SMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVC--CFGEGQKADV----IEN--SLFT 232
++G +V +L+ A A +GAD+L F K DV IE +
Sbjct: 101 L--------IIGASVYSLEEALEA-EKKGADYLGAGSVFPTKTKRDVRVIRIEGLREIVE 151
Query: 233 NVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
V IP+ + + +V + L +G G +
Sbjct: 152 AVSIPVVAIGGINVENVKQVLSAGVDGIAV 181
>gi|282895943|ref|ZP_06303983.1| Small GTP-binding protein domain protein [Raphidiopsis brookii D9]
gi|281199188|gb|EFA74057.1| Small GTP-binding protein domain protein [Raphidiopsis brookii D9]
Length = 457
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 344 ASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT 402
AS + ++ +L + ++D + + G + GKS+V+N+LLG++ L+ G + N +T
Sbjct: 45 ASLIKPQIEILNATLHKLDSNLIKIAAFGLVSRGKSAVLNSLLGEKILETGPL---NGVT 101
Query: 403 FLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVP 461
+ R R G +C + ++DTPG + I + + +
Sbjct: 102 ----------QWPRSLRWQPGIKVC---------VELIDTPGLDEINGEIRGEMARTVAQ 142
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D +T +E L +Q +K ++ V NK DLY
Sbjct: 143 KADLILFVVSGD--ITRTEYQALLELRQAQKPLILVFNKIDLY 183
>gi|227509479|ref|ZP_03939528.1| thiamine-phosphate diphosphorylase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191022|gb|EEI71089.1| thiamine-phosphate diphosphorylase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 210
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 81 IKVPNVVLQL-EPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVV 139
+KV N L L H L D L ID A V ++ L S + +YE A +K +
Sbjct: 1 MKVTNRPLYLVTDHTNLNDEDFLQQIDLACESGVSLLQLREKNRSSRDIYEWAVKVKDIA 60
Query: 140 -KDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
+ R +I +R+DIA AV+A+GV L LP +AR + + ++G +TL
Sbjct: 61 DRHRVPLMIDDRLDIAQAVDAAGVHLGQSDLPVEIARRILGNK-------KIIGATTKTL 113
Query: 199 DAAFNASSSEGADFL 213
A + +GAD+L
Sbjct: 114 KQA-KLAEEQGADYL 127
>gi|220913825|ref|YP_002489134.1| hypothetical protein Achl_3084 [Arthrobacter chlorophenolicus A6]
gi|219860703|gb|ACL41045.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
Length = 627
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 51/282 (18%)
Query: 357 AVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEI-----TFLRFSDLA 410
A ++ +P + VIV GE+ GKS +INAL+ V P ++I T +R + A
Sbjct: 43 AAGRLRDPSVRVIVVGEFKQGKSKLINALVNA-----PVCPVDDDIATSVPTVVRHGEPA 97
Query: 411 SE------------EQQRCERHPD-----GQYI----------------CYLPSPILKE- 436
S E+ ER P Y+ YLP IL
Sbjct: 98 SAAILVPKADSDGGEEGSVERQPIPIEDIAAYVSEQGNPGNSKKLVAAEVYLPRKILTGG 157
Query: 437 MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVF 496
+ ++D+PG + T +P AD +L V A + TE E+ FLR + VV
Sbjct: 158 LTVIDSPGVGGMGSSHTLTTLTALPTADAMLLVSDASQEYTEPELRFLRQAMRITPSVVG 217
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHS 556
VL+K+DLY + + + + + +T+ ++ ++PVS+ LEA + A S
Sbjct: 218 VLSKTDLYPDWRRVAD-MDRSRLDTVA----PDIPLFPVSSDLRLEAS-RLQDAELNSES 271
Query: 557 ELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRLKLET 598
H R K E+L + + E +RL L++
Sbjct: 272 GFPALVRHLRSEIVGKSERLQRRHVSQDLLSVTENLRLSLQS 313
>gi|423719729|ref|ZP_17693911.1| dynamin family protein [Geobacillus thermoglucosidans TNO-09.020]
gi|383367473|gb|EID44752.1| dynamin family protein [Geobacillus thermoglucosidans TNO-09.020]
Length = 1228
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 342 KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI 401
KKA L+E+ + +E F + G +++GKSS+INALLG+ L +PT+ +
Sbjct: 34 KKAKQLLEKAA---------NEQFAIAFCGHFSAGKSSMINALLGEPLLPSSPIPTSANL 84
Query: 402 -----------TFLRFSDLASEE--------QQRCERHPDGQYI-----CYLPSPILKEM 437
F + A E +C+ DG I C + I +
Sbjct: 85 VKVKSGQESIRVFYKHEPPAEYEPPYDLELIHAQCK---DGDAIEFIEVCRQTASIPNGV 141
Query: 438 IIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
+I+DTPG + + TE + AD+V +++ + E F + + K + V
Sbjct: 142 VIMDTPGIDSTDDAHRLATESALHLADVVFYMMDYNHVQAELNFQFTKELTGYGKTLYLV 201
Query: 498 LNKSDLYQN 506
+N+ D +++
Sbjct: 202 INQIDKHRD 210
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 425 YICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
Y C L + + +VDTPG + I R + E++ AD +LFV + ++++ FL
Sbjct: 788 YDCALTR---RGITLVDTPGADSINARHTGVAFEYIKNADAILFVTYYNHAFSKADREFL 844
Query: 485 RYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ K K+ F++N +DL + EL + +V+E + I +Y +S+R
Sbjct: 845 IQLGRVKDTFALDKMFFIVNAADLAHSPEELNAVLEYVEEQ-LAQFGIRFPRLYALSSRF 903
Query: 540 TLEAK 544
L+ K
Sbjct: 904 ALDEK 908
>gi|198431349|ref|XP_002124357.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 460
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 31/173 (17%)
Query: 357 AVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD-------- 408
V QI +++ +G +++GK+S+IN L L+ G PTT+E T + +
Sbjct: 96 TVGQIQSKPIILFLGPWSTGKTSMINYFLDTDILRVGAEPTTSEFTVVGYETSIKNTEGA 155
Query: 409 -LASEEQQR---CERHPDGQYICY----LPSPILKEMIIVDTPGTNVILQRQQ------- 453
L S++ + E++ G + LP P+LK++ VDTPG +I R+Q
Sbjct: 156 VLVSDKMKEFSPLEKYGQGFIEKFGGIGLPHPLLKKVTFVDTPG--IIENRKQQERGYPF 213
Query: 454 -RLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKK---VVFVLNKSD 502
++ + F+ A L+ V + SE+ L QQ K K + +LNK+D
Sbjct: 214 NKVMQWFIDHAALIFVVFDPTKLDVGSELETL--FQQLKGKESQIRIILNKAD 264
>gi|291566708|dbj|BAI88980.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 475
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 21/142 (14%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP---DG 423
+ + G GKSS++NALLG+ G T+ IT + E P +G
Sbjct: 78 IAVFGMVGRGKSSILNALLGQTVFATG---PTHGIT------------RTTEAKPWQVEG 122
Query: 424 QYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ + S + ++ ++DTPG + V Q ++++ + +ADL+LFVI+ D +T+ E
Sbjct: 123 ENLTGAMSYRISQVELIDTPGIDEVDGQTREQMARQVAEKADLLLFVIAGD--ITQVEYQ 180
Query: 483 FLRYTQQWKKKVVFVLNKSDLY 504
L + + K ++ V NK D Y
Sbjct: 181 ALSWLRDAGKPMLLVFNKIDQY 202
>gi|407937694|ref|YP_006853335.1| hypothetical protein C380_04900 [Acidovorax sp. KKS102]
gi|407895488|gb|AFU44697.1| hypothetical protein C380_04900 [Acidovorax sp. KKS102]
Length = 653
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I +P P+LK+ ++I+DTPG N + + LT +P+A V+F++SAD +T S++
Sbjct: 196 IINIPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFILSADTGVTRSDLSIW 254
Query: 485 R----YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE----NTMKLLNIENVTIYPVS 536
R + + + + VLNK D + + + E + ++L + + PVS
Sbjct: 255 REHLAISPESVEARLVVLNKIDTLWDTLNTADQVQSQMERQCATSAEMLGVSLDRVVPVS 314
Query: 537 ARSTLEAKLS 546
A+ L AK++
Sbjct: 315 AQKGLVAKIT 324
>gi|373457152|ref|ZP_09548919.1| tRNA modification GTPase mnmE [Caldithrix abyssi DSM 13497]
gi|371718816|gb|EHO40587.1| tRNA modification GTPase mnmE [Caldithrix abyssi DSM 13497]
Length = 457
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 33/144 (22%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
++I G+ N GKSS++NALL K + +P T D +E
Sbjct: 226 VLITGKPNVGKSSLMNALLEKDRVLVSDIPGTTR-------DFVHDE------------- 265
Query: 427 CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA-------DLVLFVISADRPLTES 479
YL + ++K +DT G + +L +E + RA DL+LF+ A +PL +
Sbjct: 266 IYLENVLVK---FIDTAGIRI---SDDKLEKEGIKRAEKLFSDVDLILFLFDASQPLDDE 319
Query: 480 EVVFLRYTQQWKKKVVFVLNKSDL 503
+ ++ + +K+KV+FV NK DL
Sbjct: 320 DFYLIKKLKDFKEKVIFVGNKIDL 343
>gi|222095298|ref|YP_002529358.1| reticulocyte binding protein [Bacillus cereus Q1]
gi|221239356|gb|ACM12066.1| reticulocyte binding protein [Bacillus cereus Q1]
Length = 1219
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 137/302 (45%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + L
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEY--LM 277
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+ +SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 278 REHFSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCTLTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|119512965|ref|ZP_01632026.1| Small GTP-binding protein domain protein [Nodularia spumigena
CCY9414]
gi|119462378|gb|EAW43354.1| Small GTP-binding protein domain protein [Nodularia spumigena
CCY9414]
Length = 517
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NA++G+ + T ++ G+
Sbjct: 134 VVVFGTGSAGKTSLVNAIMGRMVGQVNAPMGTTQV---------------------GETY 172
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
C + ++++I DTPG V +++L E ADL+LFV+ D L SE
Sbjct: 173 CLRLKGLERKILITDTPGILEAGVEGTEREQLARELATSADLLLFVV--DNDLRRSEYEP 230
Query: 484 LRYTQQWKKKVVFVLNKSDLYQN 506
LR + K+ + VLNK+DLY +
Sbjct: 231 LRSLAEIGKRSLLVLNKTDLYTD 253
>gi|433645216|ref|YP_007290218.1| dynamin family protein [Mycobacterium smegmatis JS623]
gi|433294993|gb|AGB20813.1| dynamin family protein [Mycobacterium smegmatis JS623]
Length = 619
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 333 VLLEAIDVIKKASPLMEE---VSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKR 388
V++E ID K + + E V + A +I +P + +VI G+ GKS ++N+LL
Sbjct: 12 VIVELIDHTSKIAEIQERGDLVERMAKAKVRISDPQIRVVIAGQLKQGKSQLLNSLLNVP 71
Query: 389 YLKDGVVPTTNEITFLRFSDLASEE---------------------QQRCERHP--DGQY 425
+ G TT T + + + A+ + + RHP G+
Sbjct: 72 VSRVGDDETTVVATMVSYGEQATAKLMVASVDGAEPEAIEIPIADIKNDLRRHPAAGGRQ 131
Query: 426 ICYLP----SPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
+ + SP+LK ++ VDTPG Q T +P AD ++ V + TE E
Sbjct: 132 VLRVAVTANSPLLKGGLVFVDTPGVGGHGQPHLSATLGLLPDADAMMMVSDTSQEFTEPE 191
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLY 504
+ F+R + V K+DLY
Sbjct: 192 MTFIRQAFEICPVATIVATKTDLY 215
>gi|429122868|ref|ZP_19183401.1| hypothetical protein A966_01020 [Brachyspira hampsonii 30446]
gi|426281323|gb|EKV58322.1| hypothetical protein A966_01020 [Brachyspira hampsonii 30446]
Length = 798
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 47/228 (20%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE-- 418
I + F L ++ +SGKS+++NA LG+ + + T I +R D C
Sbjct: 134 IGKEFELAVIATMSSGKSTLLNAFLGRELMPSKNLACTATIARIRDVDGMEGTSVICRDA 193
Query: 419 ------------------RHPDGQYICYLPS----PILK----EMIIVDTPG-TNVILQR 451
D + + Y+ P + E++++DTPG N +R
Sbjct: 194 DENIIIDEVSNVTVNDMSEFNDNEKVSYIDIKTDIPFVSSHNLELVLLDTPGPNNSRDER 253
Query: 452 QQRLTEEFVPRAD-LVLFVISADRPLTESEVVFL--------RYTQQWKKKVVFVLNKSD 502
+ T + + AD LVL+V++A + T + + L + +Q K + +FV+NK D
Sbjct: 254 HKEKTYKVINEADPLVLYVLNATQLSTNDDNLLLSSVSKAMEKAGKQAKDRFLFVVNKLD 313
Query: 503 LYQNAFELE--EAISFVKENTMKLL---NIENVTIYPVSARSTLEAKL 545
F+LE E+I V + + L I N IY VSAR+ L A+L
Sbjct: 314 ----TFDLEAGESIKKVYNDVVSYLKSHGIVNPNIYLVSARTALTARL 357
>gi|206974821|ref|ZP_03235736.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|423371649|ref|ZP_17348989.1| hypothetical protein IC5_00705 [Bacillus cereus AND1407]
gi|206746840|gb|EDZ58232.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|401101360|gb|EJQ09350.1| hypothetical protein IC5_00705 [Bacillus cereus AND1407]
Length = 1219
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 137/302 (45%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + L
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEY--LM 277
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+ +SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 278 REHFSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCTLTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|304406875|ref|ZP_07388529.1| Dynamin family protein [Paenibacillus curdlanolyticus YK9]
gi|304343862|gb|EFM09702.1| Dynamin family protein [Paenibacillus curdlanolyticus YK9]
Length = 533
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS--------------- 411
+ G +++GKS+++N L G + L +PT+ + +R + AS
Sbjct: 49 VAFCGHFSAGKSTLVNRLCGAKLLPSSPIPTSANVVSIRGGERASVTIDQVREDGSLETI 108
Query: 412 ----EEQQRCERHP-DG-QYICY---LPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVP 461
E + R+ DG +Y+ P+ +L ++I++DTPG + ++ TE +
Sbjct: 109 ELPTSELENLNRYCIDGAKYMTVDIVYPAEVLGDDIILLDTPGIDSTDDAHKQATESALH 168
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
AD+V +V+ + +E F + + W K + ++N+ D ++
Sbjct: 169 LADVVFYVMDYNHVQSEINFTFAKELKDWGKPLYLIVNQIDKHR 212
>gi|241764079|ref|ZP_04762117.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
gi|241366610|gb|EER61091.1| conserved hypothetical protein [Acidovorax delafieldii 2AN]
Length = 668
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 22/136 (16%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+F++ AD +T S++
Sbjct: 211 VINIPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFILGADTGVTRSDLAI- 268
Query: 485 RYTQQWKKKV----------VFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
W++ + + VLNK D + E+ ++ + + +L +
Sbjct: 269 -----WREHLATSPDSLDARLVVLNKIDTLWDTLNSPQEIAAQMTRQRTTSADMLGVPLA 323
Query: 531 TIYPVSARSTLEAKLS 546
+ PVSA+ L AK++
Sbjct: 324 QVVPVSAQKGLVAKIT 339
>gi|217959153|ref|YP_002337701.1| hypothetical protein BCAH187_A1741 [Bacillus cereus AH187]
gi|229138366|ref|ZP_04266960.1| Reticulocyte binding protein [Bacillus cereus BDRD-ST26]
gi|423353847|ref|ZP_17331473.1| hypothetical protein IAU_01922 [Bacillus cereus IS075]
gi|423569413|ref|ZP_17545659.1| hypothetical protein II7_02635 [Bacillus cereus MSX-A12]
gi|217067363|gb|ACJ81613.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228645131|gb|EEL01369.1| Reticulocyte binding protein [Bacillus cereus BDRD-ST26]
gi|401088422|gb|EJP96610.1| hypothetical protein IAU_01922 [Bacillus cereus IS075]
gi|401206668|gb|EJR13455.1| hypothetical protein II7_02635 [Bacillus cereus MSX-A12]
Length = 1219
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 137/302 (45%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + L
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEY--LM 277
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+ +SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 278 REHFSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCTLTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|312110720|ref|YP_003989036.1| Dynamin family protein [Geobacillus sp. Y4.1MC1]
gi|311215821|gb|ADP74425.1| Dynamin family protein [Geobacillus sp. Y4.1MC1]
Length = 1228
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 36/189 (19%)
Query: 342 KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEI 401
KKA L+E+ + +E F + G +++GKSS+INALLG+ L +PT+ +
Sbjct: 34 KKAKQLLEKAA---------NEQFAIAFCGHFSAGKSSMINALLGEPLLPSSPIPTSANL 84
Query: 402 -----------TFLRFSDLASEE--------QQRCERHPDGQYI-----CYLPSPILKEM 437
F + A E +C+ DG I C + I +
Sbjct: 85 VKVKSGQESIRVFYKHEPPAEYEPPYDLELIHAQCK---DGDAIEFIEVCRQTASIPNGV 141
Query: 438 IIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFV 497
+I+DTPG + + TE + AD+V +++ + E F + + K + V
Sbjct: 142 VIMDTPGIDSTDDAHRLATESALHLADVVFYMMDYNHVQAELNFQFTKELTGYGKTLYLV 201
Query: 498 LNKSDLYQN 506
+N+ D +++
Sbjct: 202 INQIDKHRD 210
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 425 YICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
Y C L + + +VDTPG + I R + E++ AD +LFV + ++++ FL
Sbjct: 788 YDCALTR---RGITLVDTPGADSINARHTGVAFEYIKNADAILFVTYYNHAFSKADREFL 844
Query: 485 RYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ K K+ F++N +DL + EL + +V+E + I +Y +S+R
Sbjct: 845 IQLGRVKDTFALDKMFFIVNAADLAHSPEELNAVLEYVEEQ-LAQFGIRFPRLYALSSRF 903
Query: 540 TLEAK 544
L+ K
Sbjct: 904 ALDEK 908
>gi|62185493|ref|YP_220278.1| GTP-binding protein EngA [Chlamydophila abortus S26/3]
gi|81312359|sp|Q5L4W4.1|DER_CHLAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|62148560|emb|CAH64331.1| putative GTP-binding protein [Chlamydophila abortus S26/3]
Length = 474
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL +R + D V TT + + +S H
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNVPGTTRDNIDILYS------------H 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTM 522
L + KK + ++NK DL + +E I ++ M
Sbjct: 312 KRILSLISKQKKPHIILVNKWDLIE-GVRMEHYIRDLRATDM 352
>gi|257094299|ref|YP_003167940.1| hypothetical protein CAP2UW1_2729 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046823|gb|ACV36011.1| conserved hypothetical protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 651
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 22/136 (16%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I P P+L++ ++I+DTPG N I + LT +P A VLF+++AD +T+S++
Sbjct: 194 IINFPHPLLEQGLVILDTPGLNAI-GTEPELTLSLLPNAHAVLFILAADTGVTQSDLTV- 251
Query: 485 RYTQQW----------KKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
W KK + VLNK D + E+ I+ + L++
Sbjct: 252 -----WQEHIGAPGGRKKGRIVVLNKIDSLWDELKSPAEVAAEIARQVDTCAWTLDLPAA 306
Query: 531 TIYPVSARSTLEAKLS 546
I+PVSA+ L AK++
Sbjct: 307 QIFPVSAQKALVAKIN 322
>gi|407458501|ref|YP_006736806.1| GTP-binding domain-containing protein [Chlamydia psittaci
WS/RT/E30]
gi|405784916|gb|AFS23662.1| small GTP-binding domain protein [Chlamydia psittaci WS/RT/E30]
Length = 474
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL + R + D + TT + + +S +
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNIPGTTRDNIDILYS------------Y 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ L + KK + ++NK DL Q
Sbjct: 312 KLILSLISKQKKPHIILVNKWDLIQ 336
>gi|398802323|ref|ZP_10561537.1| dynamin family protein [Polaromonas sp. CF318]
gi|398100224|gb|EJL90464.1| dynamin family protein [Polaromonas sp. CF318]
Length = 659
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ + P+LK+ ++I+DTPG N I + LT +P+A V+F+++AD +T+S++
Sbjct: 194 LINIAHPLLKQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVFILAADTGVTKSDLSI- 251
Query: 485 RYTQQWKKKVV----------FVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
W++ ++ VLNK D +A +++ I + + ++L +
Sbjct: 252 -----WREHLITEGDGSDARLVVLNKIDTLWDALSTPEQVKAQIDRQRATSAEILGLPET 306
Query: 531 TIYPVSARSTLEAKLS 546
+ PVSA+ L AK++
Sbjct: 307 QVIPVSAQKGLVAKVT 322
>gi|407649224|ref|YP_006812983.1| putative isoniazid inductible gene protein iniA [Nocardia
brasiliensis ATCC 700358]
gi|407312108|gb|AFU06009.1| putative isoniazid inductible gene protein iniA [Nocardia
brasiliensis ATCC 700358]
Length = 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 33/214 (15%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLG---- 386
+VL E I +A+ + V L A ++ +P +IV G+ + GKS +NALL
Sbjct: 17 AVLGETI-AAARAAGRTDLVGTLEVAADRVRDPRRRIIVAGQLDQGKSRFVNALLNLDIC 75
Query: 387 ----------KRYLKDGVVPTTNEITFLRFSDLASEEQQ----------RCERHP--DGQ 424
L G P + D E + R P G+
Sbjct: 76 PVGDDVTTTFTTVLAHGPAPRAELVLAAPGGDAGGPETRVAVPIDEIGGLAARSPLAHGR 135
Query: 425 YICYL----PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTES 479
I L P+P+L + +++VDTPG VP AD VL + A LTE
Sbjct: 136 RILRLELEVPNPLLADGIVLVDTPGVGGHGSSYAASVLGMVPAADAVLVLSDASTELTEP 195
Query: 480 EVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
E+ FLR ++ V ++ K+DLY + ++ +A
Sbjct: 196 ELAFLRQVRELCPTVALLVTKTDLYPHWRQVYQA 229
>gi|389573991|ref|ZP_10164060.1| hypothetical protein BAME_26290 [Bacillus sp. M 2-6]
gi|388426180|gb|EIL83996.1| hypothetical protein BAME_26290 [Bacillus sp. M 2-6]
Length = 1197
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 427 CYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
YL +P+ K + IVDTPG + + +R + +++ AD +L++ ++++ FLR
Sbjct: 764 VYLSTPLTDKGLTIVDTPGASSMNKRHTEIAFQYMKDADALLYLTYYQHSFSKADRSFLR 823
Query: 486 YTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
K K+ F++N +DL ++ ELE +V+ K I N ++ VS++
Sbjct: 824 KLGLVKDSFSMDKMFFIINAADLAKDQAELETVFDYVRSELTK-EGIRNPNLHHVSSKEE 882
Query: 541 LEAK 544
+E K
Sbjct: 883 IEGK 886
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 27/248 (10%)
Query: 360 QIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL--------------R 405
+ +E + G Y++GKSS++N LL L +PT+ + + R
Sbjct: 40 EAEEEVYIAFTGHYSAGKSSLVNHLLHDHILPTSPIPTSANLVVVRKGVSEVQLHTSDGR 99
Query: 406 FSDL-ASEEQQRCERH-PDGQYICYLP-----SPILKEMIIVDTPGTNVILQRQQRLTEE 458
F+ + S +++ +R DG+ I + S + +++ ++DTPG +
Sbjct: 100 FAKMGGSYDKEAVQRFCKDGEQIEMVEISGDYSGLEEKVALIDTPGIDSTDHAHFLSAAS 159
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK 518
+ +AD + +V+ + +E + F+R ++ + F++N+ D + E E K
Sbjct: 160 ILHQADALFYVVHYNHVHSEENIRFIRSIKEKVPNLYFIVNQVDRHD---EQETTFEDYK 216
Query: 519 ENTMKLL---NIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEK 575
+ +++L IE +Y S K + V K ++ + R T K+E
Sbjct: 217 KQIVEMLLKEGIEEEHLYFTSVTDEAHPKNEMIRLVKKLQELQTMPKASLRAYTEQKIEH 276
Query: 576 LLYSFLDG 583
+L +D
Sbjct: 277 VLKEHMDS 284
>gi|119487772|ref|ZP_01621281.1| hypothetical protein L8106_29860 [Lyngbya sp. PCC 8106]
gi|119455605|gb|EAW36742.1| hypothetical protein L8106_29860 [Lyngbya sp. PCC 8106]
Length = 472
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 21/172 (12%)
Query: 347 LMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR 405
L ++ +L +++ ++D+ + + + G + GKS+V+NALLG+ L+ G + N +T
Sbjct: 43 LKTQLDILAESLDKLDQGLIRIAVFGLVSRGKSAVLNALLGEHILQTGPL---NGVT--- 96
Query: 406 FSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRAD 464
+ R R + I E+I DTPG + V Q + + E +AD
Sbjct: 97 -------QWPRSVRWTVPSRYDHQQDSIPVELI--DTPGLDEVGGQVRGEMAREVTRQAD 147
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISF 516
L+LFV+S D LT +E L ++ K ++ V NK DLY + ++AI F
Sbjct: 148 LILFVVSGD--LTRTEYEGLCELRRSTKPLIVVFNKVDLYTDTE--QQAIYF 195
>gi|311068715|ref|YP_003973638.1| GTP-binding protein [Bacillus atrophaeus 1942]
gi|310869232|gb|ADP32707.1| putative GTP-binding protein [Bacillus atrophaeus 1942]
Length = 1194
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 427 CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
Y SP+ ++ I IVDTPG + + +R L +++ AD ++ ++ + FLR
Sbjct: 760 VYYTSPLTEKGITIVDTPGASSLNKRHTELAFQYIKDADAFFYMTYYQHSFSKGDKSFLR 819
Query: 486 YTQQWKK-----KVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
K+ K+ FV+N +DL +N ELE +V K I+ +Y VS++
Sbjct: 820 KLGLVKESLSMDKMFFVINAADLAENERELETVTDYVGSELAK-EGIQQPQLYSVSSKDE 878
Query: 541 LEAK 544
L+ K
Sbjct: 879 LQGK 882
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 47/263 (17%)
Query: 312 RVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDE-PFLLVIV 370
R A VK DR+ Q+ + + D++ S L ++ + +++E F L +
Sbjct: 560 RRAQPVKSRDRDFQM-QDHIQRFYQLSDLLGGFSMLSKQTEAFRGRIKRLEERQFTLALF 618
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTT---NEITFLRFSDLASEEQQRCERHPDGQYIC 427
G ++SGKSS NAL+G+R L PTT N++T + ++H +
Sbjct: 619 GGFSSGKSSFANALVGERVLPSSPTPTTATINKVT----------KPINGKKHKTADVVF 668
Query: 428 YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV------ 481
I+ E+ V G N+ Q+ + L+E+ L + L E ++
Sbjct: 669 KTEDDIITEL--VQLTGINISEQKGKSLSEK--------LQTMMKKGRLQEDQIRTAGNF 718
Query: 482 --VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIY---PVS 536
+ Y Q ++++V + L+E +V E T + ++ VT+Y P++
Sbjct: 719 LNAYRNYEQHIREQIVLTI----------PLDELKPYVAEETTACI-VKAVTVYYTSPLT 767
Query: 537 ARSTLEAKLSVSSAVGKDHSELS 559
+ +S++ K H+EL+
Sbjct: 768 EKGITIVDTPGASSLNKRHTELA 790
>gi|158421703|ref|YP_001522995.1| thiamine-phosphate pyrophosphorylase [Azorhizobium caulinodans ORS
571]
gi|158328592|dbj|BAF86077.1| thiamine monophosphate synthase [Azorhizobium caulinodans ORS 571]
Length = 238
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 102 LDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNAS 160
L+ ++EAVA V +V L EA G+++ E A L +++ + + +I +RVD+AAAV A
Sbjct: 50 LETVEEAVAGGVTLVQLRDPEAKGRALAEEARALIGLLRPKGIPLIINDRVDVAAAVGAE 109
Query: 161 GVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVC--CFG 218
GV L L AR + ++G +V +L+ +AS+ D++ C
Sbjct: 110 GVHLGQDDLDPAAARAILGPD-------AIIGLSVGSLE-ELSASNLGPVDYVGCGPINA 161
Query: 219 EGQKADV-----IENSLF--TNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
G K D IE F +++ +P+ + D +++GA+G +
Sbjct: 162 TGTKGDAGGAIGIEGFAFLRSHIALPMVGIGGLKAEDAEAVMQAGANGIAV 212
>gi|88807391|ref|ZP_01122903.1| possible GTPase [Synechococcus sp. WH 7805]
gi|88788605|gb|EAR19760.1| possible GTPase [Synechococcus sp. WH 7805]
Length = 438
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 27/141 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NAL+G+ S +A++ C R Q
Sbjct: 52 IAVFGRVGVGKSSLVNALVGQ-------------------SLMATDVAHGCTRQ---QQS 89
Query: 427 CYLPSPI--LKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
P+P+ L+ + +VDTPG + V + RL ADLVL V+ D +T+ E+
Sbjct: 90 TPWPTPVPGLQAVDLVDTPGIDEVNGPARARLAGRVALNADLVLLVLDGD--ITQVELDA 147
Query: 484 LRYTQQWKKKVVFVLNKSDLY 504
L Q K V+ VLN+SD +
Sbjct: 148 LTVLQNKGKPVITVLNRSDCW 168
>gi|456012319|gb|EMF46025.1| GTP-binding protein Era [Planococcus halocryophilus Or1]
Length = 336
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 37/182 (20%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
+++ L+ ++GE N+GKSS IN ++G+ + +TN +
Sbjct: 27 LEQELLISLIGEVNAGKSSTINKIIGEN------IASTNPMP------------------ 62
Query: 421 PDGQYICYLPSPI--LKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI-SADRPLT 477
G+ + P I L+ + +DTPG N + T EFV ++D+VLF + +A +
Sbjct: 63 --GETVSVDPYNIRGLENIKFMDTPGLNDPNDENPKKTLEFVQKSDVVLFFLNAAGTVFS 120
Query: 478 ESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
ESE ++ K ++ VLNK D A ++ + F+K +T + P+S+
Sbjct: 121 ESEKEKFNEIEKHNKDILIVLNKIDA---AEDVPSIVKFIKGHTA-----NKYKVIPISS 172
Query: 538 RS 539
++
Sbjct: 173 KT 174
>gi|419820646|ref|ZP_14344255.1| putative GTP-binding protein [Bacillus atrophaeus C89]
gi|388475120|gb|EIM11834.1| putative GTP-binding protein [Bacillus atrophaeus C89]
Length = 1194
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 427 CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
Y SP+ ++ I IVDTPG + + +R L +++ AD ++ ++ + FLR
Sbjct: 760 VYYTSPLTEKGITIVDTPGASSLNKRHTELAFQYIKDADAFFYMTYYQHSFSKGDKSFLR 819
Query: 486 YTQQWKK-----KVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
K+ K+ FV+N +DL +N ELE +V K I+ +Y VS++
Sbjct: 820 KLGLVKESLSMDKMFFVINAADLAENERELETVTDYVGSELAK-EGIQQPQLYSVSSKDE 878
Query: 541 LEAK 544
L+ K
Sbjct: 879 LQGK 882
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 47/263 (17%)
Query: 312 RVAGFVKFEDREKQLIETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDE-PFLLVIV 370
R A VK DR+ Q+ + + D++ S L ++ + +++E F L +
Sbjct: 560 RRAQPVKSRDRDFQM-QDHIQRFYQLSDLLGGFSMLSKQTEAFRGRIKRLEERQFTLALF 618
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTT---NEITFLRFSDLASEEQQRCERHPDGQYIC 427
G ++SGKSS NAL+G+R L PTT N++T + ++H +
Sbjct: 619 GGFSSGKSSFANALVGERVLPSSPTPTTATINKVT----------KPINGKKHKTADVVF 668
Query: 428 YLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV------ 481
I+ E+ V G N+ Q+ + L+E+ L + L E ++
Sbjct: 669 KTEDDIITEL--VQLTGINISEQKGKSLSEK--------LQTMMKKGRLQEDQIRTAGNF 718
Query: 482 --VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIY---PVS 536
+ Y Q ++++V + L+E +V E T + ++ VT+Y P++
Sbjct: 719 LNAYRNYEQHIREQIVLTI----------PLDELKPYVAEETTACI-VKAVTVYYTSPLT 767
Query: 537 ARSTLEAKLSVSSAVGKDHSELS 559
+ +S++ K H+EL+
Sbjct: 768 EKGITIVDTPGASSLNKRHTELA 790
>gi|365162369|ref|ZP_09358499.1| hypothetical protein HMPREF1014_03962 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363618682|gb|EHL70026.1| hypothetical protein HMPREF1014_03962 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 1219
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQS 221
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+IE +Y S R + S S + + + R + E L+
Sbjct: 222 FFN-WDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +PI I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPISISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVKVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|359766131|ref|ZP_09269950.1| hypothetical protein GOPIP_031_04050 [Gordonia polyisoprenivorans
NBRC 16320]
gi|359316767|dbj|GAB22783.1| hypothetical protein GOPIP_031_04050 [Gordonia polyisoprenivorans
NBRC 16320]
Length = 638
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 339 DVIKKASPLMEEV------SLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLK 391
D+I +A+ L + + L A +++ +P L +V+VG GKS +NALL
Sbjct: 45 DLIARAATLAAQTQRDDLTARLQGAHARLSDPRLRIVVVGNLKQGKSQFVNALLNLGVCA 104
Query: 392 DG-----VVPT----------------TNEITFLRFSDLASEEQQRCERHPDGQYICYL- 429
G VPT T++ + F ++ S H G+ + L
Sbjct: 105 VGDDESTAVPTLISHAEQPAAHLVVAGTDQPIPIPFDEVTSVTPTSA--HTQGREVMRLE 162
Query: 430 ---PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
P P+L + ++++DTPG T V AD V V A + T E+ FLR
Sbjct: 163 ITAPGPLLADGLVVIDTPGVGGHGHPYAATTLGMVAAADAVFMVTDASQEFTAPEMAFLR 222
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEA 513
V +L K+DLY + + +A
Sbjct: 223 QVVDLCPTVACLLTKTDLYPHWRRIADA 250
>gi|415885902|ref|ZP_11547725.1| TPR repeat-containing protein [Bacillus methanolicus MGA3]
gi|387588555|gb|EIJ80876.1| TPR repeat-containing protein [Bacillus methanolicus MGA3]
Length = 916
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 34/163 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITF--------LRFSDLA-------S 411
L + G +GKS+ IN++LG+ L PT++ I F + SD
Sbjct: 379 LFVAGSSGNGKSAFINSVLGENIL---TAPTSSVIVFKGHDETEIRKISDTVLTAVSSFH 435
Query: 412 EEQQRCERHPDGQYI-----CYLPSPILKE--MIIVDTPGTNVILQRQQRLTEE---FVP 461
E Q+ ER + + LPSPIL+E + ++DTPG N + R+ E ++
Sbjct: 436 EFQELVERRQNKAFDNAIFEFSLPSPILQENRLALIDTPGFN----GRNRIESEALKYLH 491
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKK--VVFVLNKSD 502
AD +LFV+ A+ P TE E L +++ + F++NK D
Sbjct: 492 FADSLLFVLDANDPFTEKEQEILMQIREYAPNLPIHFLINKID 534
>gi|365963300|ref|YP_004944866.1| ABC transporter [Propionibacterium acnes TypeIA2 P.acn31]
gi|365739981|gb|AEW84183.1| ABC transporter [Propionibacterium acnes TypeIA2 P.acn31]
Length = 621
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + + + D + + P I + + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLVRSQVASN-DASSLQLVAEPDIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q+ + V ++
Sbjct: 173 VTSAARYADAVPWDFLNEAQERHASIAVVCDR 204
>gi|389797807|ref|ZP_10200846.1| hypothetical protein UUC_08813 [Rhodanobacter sp. 116-2]
gi|388446645|gb|EIM02669.1| hypothetical protein UUC_08813 [Rhodanobacter sp. 116-2]
Length = 452
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G ++GKS++ NALLG+ GV+ T ++ E DG
Sbjct: 76 VAVFGRVSTGKSALGNALLGRDAFTVGVLHGTTT---------GADHAVLDEAQHDG--- 123
Query: 427 CYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
++++DTPG N + + +++L + +DLV+FV D LT E+ L+
Sbjct: 124 ----------LVLIDTPGINELDGEAREKLAFDVAEVSDLVVFVGDGD--LTREELDALK 171
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
++ ++ LNK+D Y A EL + ++ +++ L+ E+V V+AR + +L
Sbjct: 172 TLAATQRPLLLALNKADRY-GADELADLLAHLRQRVAGLVRAEDV--LAVAARPAPQ-RL 227
Query: 546 SVSSAVGKDH 555
A G +H
Sbjct: 228 VEVDARGHEH 237
>gi|389793245|ref|ZP_10196418.1| hypothetical protein UU9_03607 [Rhodanobacter fulvus Jip2]
gi|388434813|gb|EIL91743.1| hypothetical protein UU9_03607 [Rhodanobacter fulvus Jip2]
Length = 454
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 30/167 (17%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC--ERHPDGQ 424
+ + G ++GKS++ NALLG+ GV+ T +E Q E DG
Sbjct: 78 IAVFGRVSAGKSALGNALLGRPAFPVGVLHGTT-----------TEAGQATLDEAQHDG- 125
Query: 425 YICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
++++DTPG N + + ++RL + ADLV+FV D LT E+
Sbjct: 126 ------------LVLIDTPGINELDGEARERLAFDVAEIADLVVFVCDGD--LTRQELDA 171
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENV 530
L+ ++ ++ LNK+D Y A EL + +++ L+ ++V
Sbjct: 172 LKTLAATQRPLLLALNKADRY-GADELTALLDHLRQRVAGLVRPDDV 217
>gi|402834205|ref|ZP_10882809.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
gi|402278784|gb|EJU27839.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
Length = 442
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH---PDG 423
+ ++G N GKSS++NALLG+ + SD+A + + H D
Sbjct: 179 IAVIGRPNVGKSSLVNALLGEERVI--------------VSDVAGTTRDAIDTHFMAEDT 224
Query: 424 QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
++I + + ++ +D P + R R V RAD+VL V+ A +TE +
Sbjct: 225 KFIL-IDTAGMRRKGKIDAPIERYSVMRALRA----VDRADVVLVVLDATAGITEQDKKI 279
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFE 509
Y + K VV ++NK D+Y+N E
Sbjct: 280 AGYAHESGKAVVLIVNKWDIYENKDE 305
>gi|411116460|ref|ZP_11388947.1| small GTP-binding protein [Oscillatoriales cyanobacterium JSC-12]
gi|410712563|gb|EKQ70064.1| small GTP-binding protein [Oscillatoriales cyanobacterium JSC-12]
Length = 494
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 17/242 (7%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG+ + G + L E +R
Sbjct: 81 IAVFGMVGRGKSSLLNALLGETVFETGPIHGVTRSRQTANWRLKHESVVGSDR---SLTR 137
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
LP + ++DTPG + V + ++ + + +ADL+LF+I+ D +T+ E L
Sbjct: 138 VTLPGAGDSHIELIDTPGIDEVNGEAREAMARQIAQQADLILFIIAGD--MTKVEYQALS 195
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKL 545
+Q K ++ V NK D Y +A L E +LL+ + + + +A S L AK
Sbjct: 196 ELRQASKPIILVFNKIDQYPDADRLTIYRKIRDERVKELLSPDEIVM---AAASPLVAK- 251
Query: 546 SVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLD--GSSSTGKERMRLKLETPIRIA 603
+V G+ ++LS + D+L+ + LD G S M + R+
Sbjct: 252 AVRRPDGRVAAQLSAGEPQ-----VDELKLKILEILDREGKSLVAINSMLFADDVNERLV 306
Query: 604 ER 605
ER
Sbjct: 307 ER 308
>gi|226364963|ref|YP_002782745.1| hypothetical protein ROP_55530 [Rhodococcus opacus B4]
gi|226243452|dbj|BAH53800.1| hypothetical protein [Rhodococcus opacus B4]
Length = 614
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 28/188 (14%)
Query: 354 LIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE 412
L A +++ +P + +V+VG GKS +N+LL G TT T ++ ++ AS
Sbjct: 39 LDSARTRVQDPRMRIVVVGPLKQGKSQFVNSLLNLTVCSVGDDETTAIPTVVQNAETASA 98
Query: 413 EQQRCERHPD----------------------GQYI----CYLPSPILKE-MIIVDTPGT 445
E + D G+ + +PSP+L + +++VDTPG
Sbjct: 99 ELVLADPGADPIRVPLPLDELNGITPASPRAGGREVLRVEVNVPSPLLADGLVLVDTPGV 158
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
T +P +D V + A + TE E+ F+R V +++K+DLY
Sbjct: 159 GGAGNPHAASTLGLIPASDAVFVLSDASQEFTEPELGFIRQVTSLCPSVACLISKTDLYP 218
Query: 506 NAFELEEA 513
+ E+ EA
Sbjct: 219 HWREIVEA 226
>gi|29840678|ref|NP_829784.1| GTP-binding protein EngA [Chlamydophila caviae GPIC]
gi|33301057|sp|Q821L7.1|DER_CHLCV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|29835028|gb|AAP05662.1| GTP-binding protein [Chlamydophila caviae GPIC]
Length = 474
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFS 407
EE + S D+P + ++G N GKSS+IN LL +R + D V TT + + +S
Sbjct: 196 EEEEIPFSTTSAPDKPLKIALIGRPNVGKSSIINGLLNEERCIIDNVPGTTRDNVDILYS 255
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
H D Y+ ++ + L++M V N I TE+ + RAD+ L
Sbjct: 256 ------------HNDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADVCL 298
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
VI A L+ + L + KK + ++NK DL +
Sbjct: 299 LVIDAQHHLSSYDKRILSLISKHKKPHIILVNKWDLIE 336
>gi|440680035|ref|YP_007154830.1| small GTP-binding protein [Anabaena cylindrica PCC 7122]
gi|428677154|gb|AFZ55920.1| small GTP-binding protein [Anabaena cylindrica PCC 7122]
Length = 458
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 344 ASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEIT 402
AS + E+ L ++++D + + G + GKS+V+N+LLG++ L+ G + N +T
Sbjct: 39 ASLVKPEIEALTATLNKLDSNVIRIAAFGLVSRGKSAVLNSLLGEKILQTGPL---NGVT 95
Query: 403 FLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVP 461
+ + P G+ + L +DTPG + I + + ++ +
Sbjct: 96 ---------QWPRSIRWKPGGKVLVEL----------IDTPGLDEIEGESRAQMARDVAR 136
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+ADL+LFV+S D +T E L +Q +K ++ V NK DLY
Sbjct: 137 QADLILFVVSGD--ITRIEYQGLLELRQAQKPLILVFNKIDLY 177
>gi|386390474|ref|ZP_10075263.1| hypothetical protein HMPREF1054_0637 [Haemophilus
paraphrohaemolyticus HK411]
gi|385693199|gb|EIG23854.1| hypothetical protein HMPREF1054_0637 [Haemophilus
paraphrohaemolyticus HK411]
Length = 507
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 37/185 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+++ G YN+GKS+++N L GK +P T+++ +R+P G Y
Sbjct: 43 IMLYGAYNAGKSTLVNVLSGKEVAPVADIPKTDKV----------------DRYPWGDY- 85
Query: 427 CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
+++DTPG N +Q + +T + + R ++LFVI D + +V +
Sbjct: 86 -----------VLLDTPGVNAPIQHED-VTLKQLTRCSVILFVIR-DGDMDSKDVYERLF 132
Query: 487 TQQWKKKVVFVL------NKSDLYQNAFELEEAIS-FVKENTMKLLNIENVTIYPVSARS 539
K K +F++ N D YQ + + ++ F + + L + V I P++ R+
Sbjct: 133 DLLRKDKKIFIVLNNQLSNAEDKYQATQHIRDLLAKFAPNHQINLDKLGEVEILPMNLRT 192
Query: 540 TLEAK 544
L+ +
Sbjct: 193 ALKGR 197
>gi|419589524|ref|ZP_14125315.1| tRNA modification GTPase TrmE [Campylobacter coli 317/04]
gi|380567164|gb|EIA89703.1| tRNA modification GTPase TrmE [Campylobacter coli 317/04]
Length = 442
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSEILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + IVDT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIVDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILAIFDNSRKKNEEDENIFKLLSQSDKKIFYLLNKSDL 334
>gi|282899420|ref|ZP_06307387.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
gi|281195684|gb|EFA70614.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
Length = 483
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ---RCERHPDGQYIC 427
G GKSS++NAL+G+ + G + EQ+ + G +
Sbjct: 86 GMVGRGKSSLLNALVGQPIFETG-----------PLHGVTRAEQKVNWTISQEAMGTFKA 134
Query: 428 YLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
SP ++++VDTPG + V + + L ++ +ADL+LFVI+ D +T+ E V L
Sbjct: 135 TFLSPDQSQVVLVDTPGLDEVDGETRAALAQKVAKQADLILFVIAGD--MTKIEQVALSQ 192
Query: 487 TQQWKKKVVFVLNKSDLY 504
+ K ++ V NK D Y
Sbjct: 193 LRTVGKPIILVFNKIDQY 210
>gi|50843107|ref|YP_056334.1| ABC transporter [Propionibacterium acnes KPA171202]
gi|335052165|ref|ZP_08545058.1| hypothetical protein HMPREF9947_0264 [Propionibacterium sp.
409-HC1]
gi|335053000|ref|ZP_08545856.1| hypothetical protein HMPREF9948_2239 [Propionibacterium sp.
434-HC2]
gi|342213020|ref|ZP_08705745.1| dynamin domain protein [Propionibacterium sp. CC003-HC2]
gi|365965541|ref|YP_004947106.1| ABC transporter [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974475|ref|YP_004956034.1| ABC transporter [Propionibacterium acnes TypeIA2 P.acn33]
gi|387504012|ref|YP_005945241.1| putative ABC transporter [Propionibacterium acnes 6609]
gi|422427573|ref|ZP_16504489.1| ATP/GTP-binding family protein [Propionibacterium acnes HL087PA1]
gi|422432461|ref|ZP_16509330.1| ATP/GTP-binding family protein [Propionibacterium acnes HL059PA2]
gi|422434374|ref|ZP_16511234.1| ATP/GTP-binding family protein [Propionibacterium acnes HL083PA2]
gi|422438820|ref|ZP_16515658.1| ATP/GTP-binding family protein [Propionibacterium acnes HL092PA1]
gi|422444137|ref|ZP_16520932.1| ATP/GTP-binding family protein [Propionibacterium acnes HL002PA1]
gi|422447165|ref|ZP_16523903.1| ATP/GTP-binding family protein [Propionibacterium acnes HL027PA1]
gi|422451217|ref|ZP_16527920.1| ATP/GTP-binding family protein [Propionibacterium acnes HL030PA2]
gi|422453371|ref|ZP_16530067.1| ATP/GTP-binding family protein [Propionibacterium acnes HL087PA3]
gi|422456008|ref|ZP_16532676.1| ATP/GTP-binding family protein [Propionibacterium acnes HL030PA1]
gi|422492087|ref|ZP_16568397.1| ATP/GTP-binding family protein [Propionibacterium acnes HL086PA1]
gi|422495366|ref|ZP_16571655.1| ATP/GTP-binding family protein [Propionibacterium acnes HL025PA1]
gi|422499561|ref|ZP_16575825.1| ATP/GTP-binding family protein [Propionibacterium acnes HL063PA2]
gi|422509833|ref|ZP_16585984.1| ATP/GTP-binding family protein [Propionibacterium acnes HL059PA1]
gi|422516682|ref|ZP_16592790.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA2]
gi|422522822|ref|ZP_16598843.1| ATP/GTP-binding family protein [Propionibacterium acnes HL053PA2]
gi|422530400|ref|ZP_16606359.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA1]
gi|422540145|ref|ZP_16616014.1| ATP/GTP-binding family protein [Propionibacterium acnes HL013PA1]
gi|422542143|ref|ZP_16617995.1| ATP/GTP-binding family protein [Propionibacterium acnes HL037PA1]
gi|422544619|ref|ZP_16620457.1| ATP/GTP-binding family protein [Propionibacterium acnes HL082PA1]
gi|422547037|ref|ZP_16622859.1| ATP/GTP-binding family protein [Propionibacterium acnes HL050PA3]
gi|422548703|ref|ZP_16624515.1| ATP/GTP-binding family protein [Propionibacterium acnes HL050PA1]
gi|422557037|ref|ZP_16632782.1| ATP/GTP-binding family protein [Propionibacterium acnes HL025PA2]
gi|422564024|ref|ZP_16639696.1| ATP/GTP-binding family protein [Propionibacterium acnes HL046PA1]
gi|422571086|ref|ZP_16646679.1| ATP/GTP-binding family protein [Propionibacterium acnes HL067PA1]
gi|422579326|ref|ZP_16654848.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA4]
gi|50840709|gb|AAT83376.1| putative ABC transporter [Propionibacterium acnes KPA171202]
gi|313763470|gb|EFS34834.1| ATP/GTP-binding family protein [Propionibacterium acnes HL013PA1]
gi|313793860|gb|EFS41884.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA1]
gi|313801252|gb|EFS42503.1| ATP/GTP-binding family protein [Propionibacterium acnes HL110PA2]
gi|313813516|gb|EFS51230.1| ATP/GTP-binding family protein [Propionibacterium acnes HL025PA1]
gi|313816651|gb|EFS54365.1| ATP/GTP-binding family protein [Propionibacterium acnes HL059PA1]
gi|313829521|gb|EFS67235.1| ATP/GTP-binding family protein [Propionibacterium acnes HL063PA2]
gi|313840026|gb|EFS77740.1| ATP/GTP-binding family protein [Propionibacterium acnes HL086PA1]
gi|314914832|gb|EFS78663.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA4]
gi|314919416|gb|EFS83247.1| ATP/GTP-binding family protein [Propionibacterium acnes HL050PA1]
gi|314920677|gb|EFS84508.1| ATP/GTP-binding family protein [Propionibacterium acnes HL050PA3]
gi|314930557|gb|EFS94388.1| ATP/GTP-binding family protein [Propionibacterium acnes HL067PA1]
gi|314954489|gb|EFS98895.1| ATP/GTP-binding family protein [Propionibacterium acnes HL027PA1]
gi|314957578|gb|EFT01681.1| ATP/GTP-binding family protein [Propionibacterium acnes HL002PA1]
gi|314963785|gb|EFT07885.1| ATP/GTP-binding family protein [Propionibacterium acnes HL082PA1]
gi|314968389|gb|EFT12487.1| ATP/GTP-binding family protein [Propionibacterium acnes HL037PA1]
gi|315079634|gb|EFT51627.1| ATP/GTP-binding family protein [Propionibacterium acnes HL053PA2]
gi|315099096|gb|EFT71072.1| ATP/GTP-binding family protein [Propionibacterium acnes HL059PA2]
gi|315100420|gb|EFT72396.1| ATP/GTP-binding family protein [Propionibacterium acnes HL046PA1]
gi|315106887|gb|EFT78863.1| ATP/GTP-binding family protein [Propionibacterium acnes HL030PA1]
gi|315109120|gb|EFT81096.1| ATP/GTP-binding family protein [Propionibacterium acnes HL030PA2]
gi|327452114|gb|EGE98768.1| ATP/GTP-binding family protein [Propionibacterium acnes HL092PA1]
gi|327454849|gb|EGF01504.1| ATP/GTP-binding family protein [Propionibacterium acnes HL087PA3]
gi|327457866|gb|EGF04521.1| ATP/GTP-binding family protein [Propionibacterium acnes HL083PA2]
gi|328755320|gb|EGF68936.1| ATP/GTP-binding family protein [Propionibacterium acnes HL087PA1]
gi|328758199|gb|EGF71815.1| ATP/GTP-binding family protein [Propionibacterium acnes HL025PA2]
gi|333764563|gb|EGL41955.1| hypothetical protein HMPREF9947_0264 [Propionibacterium sp.
409-HC1]
gi|333768361|gb|EGL45553.1| hypothetical protein HMPREF9948_2239 [Propionibacterium sp.
434-HC2]
gi|335278057|gb|AEH29962.1| putative ABC transporter [Propionibacterium acnes 6609]
gi|340768564|gb|EGR91089.1| dynamin domain protein [Propionibacterium sp. CC003-HC2]
gi|365742222|gb|AEW81916.1| ABC transporter [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744474|gb|AEW79671.1| ABC transporter [Propionibacterium acnes TypeIA2 P.acn33]
Length = 621
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + + + D + + P I + + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLVRSQVASN-DASSLQLVAEPDIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q+ + V ++
Sbjct: 173 VTSAARYADAVPWDFLNEAQERHASIAVVCDR 204
>gi|406936516|gb|EKD70218.1| hypothetical protein ACD_46C00599G0007 [uncultured bacterium]
Length = 295
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 29/147 (19%)
Query: 369 IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICY 428
I+G N GKS+++N+LLG++ P T L + PD Q
Sbjct: 11 IIGRPNVGKSTLLNSLLGEKISITSPKPQTTRWQILGIKNF-----------PDAQ---- 55
Query: 429 LPSPILKEMIIVDTPGTNVILQR-----QQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
+I +DTPG + +R R+ + AD+++F+I A E E+V
Sbjct: 56 --------IIFIDTPGMHTGEKRAMNRYMNRIANSVLLDADVIIFMIDATNFRHEDEMVL 107
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFEL 510
+ QQ +K V+ +NK DL +N E+
Sbjct: 108 AKL-QQVEKPVILAINKIDLLENKAEI 133
>gi|260887150|ref|ZP_05898413.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|330839080|ref|YP_004413660.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|260863212|gb|EEX77712.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|329746844|gb|AEC00201.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
Length = 442
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH---PDG 423
+ ++G N GKSS++NALLG+ + SD+A + + H D
Sbjct: 179 IAVIGRPNVGKSSLVNALLGEERVI--------------VSDVAGTTRDAIDTHFMAEDT 224
Query: 424 QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
++I + + ++ +D P + R R V RAD+VL V+ A +TE +
Sbjct: 225 KFIL-IDTAGMRRKGKIDAPIERYSVMRALRA----VDRADVVLVVLDATAGITEQDKKI 279
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFE 509
Y + K VV ++NK D+Y+N E
Sbjct: 280 AGYAHESGKAVVLIVNKWDIYENKDE 305
>gi|303229593|ref|ZP_07316381.1| hypothetical protein HMPREF9684_1815 [Veillonella atypica
ACS-134-V-Col7a]
gi|302515718|gb|EFL57672.1| hypothetical protein HMPREF9684_1815 [Veillonella atypica
ACS-134-V-Col7a]
Length = 569
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR---FSDLASEEQQ-------- 415
++I +SGKS++INA++G + + + TN I + DL + +
Sbjct: 313 IIITANMSSGKSTLINAIIGNKIAQSALEACTNNIIQYHNRVWDDLPLYDYRINQDSIVN 372
Query: 416 --RCERHPDGQYI--CYLPSPILKEMI-IVDTPGTNVILQRQQR-LTEEFVPR--ADLVL 467
+C + + + Y S K I ++DTPG N L + +T F+ DL++
Sbjct: 373 NLKCNSPVNNKTVRNIYFRSVYNKTYINLIDTPGVNNSLDLSHKDMTLRFITNESYDLLV 432
Query: 468 FVISADRPLTESEVVFLRYTQQW--KKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLL 525
+V+ + T E+ +L + K KV+FVLNK D+ L E+I ++ + + L
Sbjct: 433 YVLDCGKLGTNEELSYLSWIANNVDKNKVIFVLNKVDILTKEDNLSESIRKLQFD-LNAL 491
Query: 526 NIENVTIYPVSARSTLEAKL 545
++ +YP+ A L KL
Sbjct: 492 GFQSAKVYPIMAYPALLFKL 511
>gi|414079036|ref|YP_006998353.1| HSR1-related GTP-binding protein [Anabaena sp. 90]
gi|413973159|gb|AFW97246.1| HSR1-related GTP-binding protein [Anabaena sp. 90]
Length = 524
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 353 LLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLAS- 411
LL Q+ +P + IVG +GKS+++NALLG+ + G V T + FLR+ D S
Sbjct: 33 LLQRCQQQLHQPMRVAIVGLIKAGKSTMMNALLGEEVVATGNVEATFNVNFLRYGDRPSL 92
Query: 412 -------------------EEQQRCERHPDG----QYI-CYLPSPILKEMIIVDTPG 444
+ R + H D +YI PSPIL+ ++DTPG
Sbjct: 93 LVHFKNGRSPEPKPFTELADLTLRADTHRDYLLSIKYIEVIYPSPILESFNLIDTPG 149
>gi|30019719|ref|NP_831350.1| GTPase (dynamin-related) [Bacillus cereus ATCC 14579]
gi|229126984|ref|ZP_04255992.1| Reticulocyte binding protein [Bacillus cereus BDRD-Cer4]
gi|29895264|gb|AAP08551.1| putative GTPases (dynamin-related) [Bacillus cereus ATCC 14579]
gi|228656465|gb|EEL12295.1| Reticulocyte binding protein [Bacillus cereus BDRD-Cer4]
Length = 1219
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTIMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|389852359|ref|YP_006354593.1| thiamine-phosphate pyrophosphorylase [Pyrococcus sp. ST04]
gi|388249665|gb|AFK22518.1| thiamine-phosphate pyrophosphorylase [Pyrococcus sp. ST04]
Length = 207
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 123 ASGKSVYEAACLLKSVVKDR-ALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDS 181
A K +YE ++ + + ALF + +R+D+A AV+A GV L + +P VA+ +
Sbjct: 42 APTKEMYEVGKEIRRLTTEYGALFFVDDRIDVALAVDADGVQLGPEDMPIKVAKEIAPNL 101
Query: 182 MSESVVLPLVGRNVQTLDAAFNASSSEGADFLVC--CFGEGQKADV----IEN--SLFTN 233
+VG +V +L+ A A EGAD+L F K DV I+ + N
Sbjct: 102 --------IVGASVYSLEEAVRA-EKEGADYLGAGSVFPTKTKKDVKVIGIKGLRRIVEN 152
Query: 234 VKIPIFIMNASPLVDVSKFLKSGASGFVI 262
VKIP+ + + + + L++G +G +
Sbjct: 153 VKIPVVAIGGINIENAREVLRTGVAGIAV 181
>gi|434404266|ref|YP_007147151.1| small GTP-binding protein domain protein [Cylindrospermum stagnale
PCC 7417]
gi|428258521|gb|AFZ24471.1| small GTP-binding protein domain protein [Cylindrospermum stagnale
PCC 7417]
Length = 517
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 26/144 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NA++G+ + T ++ G+
Sbjct: 134 VVVFGTGSAGKTSLVNAIMGRMVGQVDAPMGTTQV---------------------GETY 172
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
C + ++++I DTPG V +++L ADL+LFV+ D L SE
Sbjct: 173 CLRLKGLERKILITDTPGILEAGVAGTEREQLARALATEADLLLFVVDND--LRRSEYEP 230
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNA 507
LR + K+ + VLNK+DLY A
Sbjct: 231 LRGLAEIGKRSLLVLNKTDLYTEA 254
>gi|319945398|ref|ZP_08019658.1| hypothetical protein HMPREF0551_2507 [Lautropia mirabilis ATCC
51599]
gi|319741184|gb|EFV93611.1| hypothetical protein HMPREF0551_2507 [Lautropia mirabilis ATCC
51599]
Length = 716
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 426 ICYLPSPILK-EMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I +P P+L+ ++I+DTPG N I + LT +P A VLFV++AD +T S++
Sbjct: 205 IVNIPHPLLELGLVIIDTPGLNAI-GAEPELTLNVIPNAHAVLFVLAADAGVTRSDIDVW 263
Query: 485 R--YTQQWKKKVVFVLNKSD-LY-------QNAFELEEAISFVKENTMKLLNIENVTIYP 534
+ ++ + VLNK D L+ +N E+ + V L++ +YP
Sbjct: 264 QSNISKAHRTGRFVVLNKIDGLWDELRSDAENDLEIARQVVSVS----NFLDLPTARVYP 319
Query: 535 VSARSTLEAKLSVSSAV 551
VSA+ L AK+ + A+
Sbjct: 320 VSAQKGLVAKIQGNQAL 336
>gi|282897288|ref|ZP_06305290.1| Small GTP-binding protein domain protein [Raphidiopsis brookii D9]
gi|281197940|gb|EFA72834.1| Small GTP-binding protein domain protein [Raphidiopsis brookii D9]
Length = 483
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ---RCERHPDGQYIC 427
G GKSS++NAL+G+ + G + EQ+ + G +
Sbjct: 86 GMVGRGKSSLLNALVGQPIFETG-----------PLHGVTRAEQKVNWTISQEAMGTFKA 134
Query: 428 YLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
SP ++++VDTPG + V + + L + +ADL+LFVI+ D +T+ E V L
Sbjct: 135 TFLSPDQSQIVLVDTPGLDEVDGETRAALAQRVAKQADLILFVIAGD--MTKIEQVALSQ 192
Query: 487 TQQWKKKVVFVLNKSDLY 504
+ K ++ V NK D Y
Sbjct: 193 LRTVGKPIILVFNKIDQY 210
>gi|419623403|ref|ZP_14156531.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23218]
gi|419630064|ref|ZP_14162770.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
60004]
gi|419632264|ref|ZP_14164818.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23264]
gi|419637549|ref|ZP_14169712.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 9879]
gi|419639130|ref|ZP_14171167.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
86605]
gi|419664518|ref|ZP_14194656.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-4]
gi|419684446|ref|ZP_14213045.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1577]
gi|424849178|ref|ZP_18273643.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
D2600]
gi|356487547|gb|EHI17491.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
D2600]
gi|380600925|gb|EIB21248.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23218]
gi|380606365|gb|EIB26280.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
60004]
gi|380609170|gb|EIB28864.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23264]
gi|380615153|gb|EIB34434.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 9879]
gi|380617131|gb|EIB36313.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
86605]
gi|380640786|gb|EIB58228.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-4]
gi|380667024|gb|EIB82507.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1577]
Length = 442
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDGKIFELLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|337280983|ref|YP_004620455.1| hypothetical protein Rta_33230 [Ramlibacter tataouinensis TTB310]
gi|334732060|gb|AEG94436.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 652
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 76/136 (55%), Gaps = 12/136 (8%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ + P+LK+ ++I+DTPG N I + LT +P+A V+F+++AD +T+S++
Sbjct: 196 LINIAHPLLKQGLVILDTPGLNAI-GAEPELTVNLIPQAHAVVFILAADTGVTKSDLAIW 254
Query: 485 R-----YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPV 535
R +++ ++V VLNK D ++ +++ I + + ++L + + PV
Sbjct: 255 REHLIAESEETDSRLV-VLNKIDTMWDSLSSSAQVQAQIERQRATSAEILGLPVEQVIPV 313
Query: 536 SARSTLEAKLSVSSAV 551
SA+ L AK+S +A+
Sbjct: 314 SAQKGLVAKVSDDAAL 329
>gi|423423744|ref|ZP_17400775.1| hypothetical protein IE5_01433 [Bacillus cereus BAG3X2-2]
gi|401114572|gb|EJQ22430.1| hypothetical protein IE5_01433 [Bacillus cereus BAG3X2-2]
Length = 1219
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K EV+ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEVATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|229023133|ref|ZP_04179645.1| Reticulocyte binding protein [Bacillus cereus AH1272]
gi|228738168|gb|EEL88652.1| Reticulocyte binding protein [Bacillus cereus AH1272]
Length = 956
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A++QID+ ++ SGK + L R +
Sbjct: 671 KQALLEDVKAVYKL--FHYEITTLDEALTQIDK----IMKYPSPSGKQKTTFSFL--RAV 722
Query: 391 KDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 723 QKGYEAVAAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 779
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 780 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 839
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 840 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N EE VK++
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEEYRESVKQS 212
>gi|284030153|ref|YP_003380084.1| AAA ATPase [Kribbella flavida DSM 17836]
gi|283809446|gb|ADB31285.1| AAA ATPase [Kribbella flavida DSM 17836]
Length = 1046
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 360 QIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD---------- 408
Q++ P L V+ G +GKS+++N+L+G+ + GV+ PTT + D
Sbjct: 532 QLEAPVLAVVGGSTGAGKSTLVNSLIGQVVSEPGVLRPTTRSPVLIHNPDDAEWFAGDRV 591
Query: 409 ---LASEEQQRCERHPD-GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
+A R D GQ I + + I+D P + +++ + L + + AD
Sbjct: 592 LPGMARSSGDRPGGTEDPGQIRLVAADTIPRGLAILDAPDIDSVVEANRDLATQLLAAAD 651
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKS 501
L LFV +A R FL+ V VL+++
Sbjct: 652 LWLFVTTAARYADAVPWEFLQSASDRSTAVAVVLDRA 688
>gi|218438310|ref|YP_002376639.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
gi|218171038|gb|ACK69771.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
Length = 529
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NAL+G+ G V T T + GQ
Sbjct: 135 VVVFGTGSAGKTSLVNALIGEMV---GNVEATMGTTQI------------------GQTY 173
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
I +E++I DTPG + +++L + ADL+LFVI D L +SE
Sbjct: 174 RLKLKGITREILITDTPGILEAGIAGTEREKLARQLATEADLLLFVI--DNDLRQSEYDP 231
Query: 484 LRYTQQWKKKVVFVLNKSDLYQN 506
LR + K+ + + NK+DLY +
Sbjct: 232 LRMLVEIGKRSLLIFNKTDLYTD 254
>gi|226364948|ref|YP_002782730.1| hypothetical protein ROP_55380 [Rhodococcus opacus B4]
gi|226243437|dbj|BAH53785.1| hypothetical protein [Rhodococcus opacus B4]
Length = 568
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V++G + G SSV AL+ + +E + + +A PD
Sbjct: 50 VVVLGLTDKGVSSVAGALVDADV--SAAARSRHEPVVVEYGPVA----------PDPDST 97
Query: 427 CYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
LP +L E +++VD PG + + T VP AD VLFV A + TE EV L
Sbjct: 98 VTLPHDLLAEGLVLVDAPGFSGHAPARAADTLALVPTADAVLFVSDASQEYTEPEVALLT 157
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIE-NVTIYPVSA 537
+ V+ V+NK D Y ++++A N L N + + + PVSA
Sbjct: 158 QVYKLCPMVICVVNKIDFYPRWADIQKA------NRTHLQNADLALPLLPVSA 204
>gi|118581876|ref|YP_903126.1| thiamine-phosphate pyrophosphorylase [Pelobacter propionicus DSM
2379]
gi|118504586|gb|ABL01069.1| thiamine-phosphate diphosphorylase [Pelobacter propionicus DSM
2379]
Length = 223
Score = 51.2 bits (121), Expect = 0.003, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR-ALFLIAERVDIAA 155
AG LD++ A+ VG V L + + E A L+ + + A LI RVD+
Sbjct: 28 AGRPLLDVVAAALRGGVGAVQLREKDLPDNELLELARDLRRLTHEHHARLLINRRVDVCQ 87
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVC 215
AV A GV L +GL + AR + D PL+G + ++ A A +S GADF+
Sbjct: 88 AVGADGVQLGIEGLSIVEARRLLGDG-------PLIGYSAHAVEEARRAEAS-GADFVTL 139
Query: 216 C----------FGEGQKADVIENSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
FGE D + + + IP+F + +++ + +GA G +
Sbjct: 140 SPVYHTPSKAPFGEPLGPDRLGEAC-GALGIPVFALGGIKGSTIARVMAAGAHGVAL 195
>gi|417933262|ref|ZP_12576591.1| dynamin domain protein [Propionibacterium acnes SK182B-JCVI]
gi|340772567|gb|EGR95070.1| dynamin domain protein [Propionibacterium acnes SK182B-JCVI]
Length = 620
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G+ + GV+ PTT + L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGRMVTQPGVIRPTTTSPVLVHHPADAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + R + D + + P I + + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLARSRVASN-DASSLQLVAEPGIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q V V ++
Sbjct: 173 VTSAARYADAVPWDFLNEAQNRHASVAVVCDR 204
>gi|239624142|ref|ZP_04667173.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520528|gb|EEQ60394.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 459
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 48/180 (26%)
Query: 339 DVIKKASPLMEEVSLLI---DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV 395
+++ + P++EEV L+ D + E VI+G+ N+GKSS++N LLG+ + +V
Sbjct: 194 ELLARLDPMVEEVKRLLASADDGRVMTEGVKTVILGKPNAGKSSLMNVLLGE---ERAIV 250
Query: 396 PTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRL 455
+++A + E H YL L +VDT G R
Sbjct: 251 -----------TEIAGTTRDTLEEH------IYLQGISLN---VVDTAGI--------RD 282
Query: 456 TEEFVPR------------ADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
TE+ V + ADL++FV+ RPL ES+ + + + +K + +LNKSDL
Sbjct: 283 TEDVVEKIGVDRARRAAGDADLIIFVVDGSRPLDESDREIMDFIR--GRKSIILLNKSDL 340
>gi|222823559|ref|YP_002575133.1| tRNA modification GTPase TrmE [Campylobacter lari RM2100]
gi|222538781|gb|ACM63882.1| tRNA modification GTPase, TrmE [Campylobacter lari RM2100]
Length = 442
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 32/192 (16%)
Query: 338 IDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPT 397
I + +K S L+ ++ + + + E F + I+G+ N+GKSS++N+LL +V
Sbjct: 188 ITMCEKNSKLLRDIVDISLSKKGLIEGFKVAIIGKPNAGKSSLLNSLLA---FDRAIV-- 242
Query: 398 TNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT----NVILQRQQ 453
SD+A + R E + S ++K I+DT G + I +
Sbjct: 243 ---------SDIAGTTRDRIEESLK------IGSHLIK---IIDTAGIRNADDEIEKIGV 284
Query: 454 RLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEA 513
L+ E + AD+++ V + E + L+ + KK+++VLNKSDL FE E +
Sbjct: 285 HLSYESIKEADIIIVVFDGSKEFEEEDERILQALKDCDKKIIYVLNKSDL-TTKFEHEIS 343
Query: 514 ISFVK----ENT 521
S ++ ENT
Sbjct: 344 TSCIRICAQENT 355
>gi|260219874|emb|CBA26843.1| hypothetical protein Csp_G38660 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 653
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 22/136 (16%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ + P+LK+ ++I+DTPG N I + LT +P+A V+F++ AD +T+S++
Sbjct: 196 LINIAHPLLKQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVFMLGADTGVTKSDLSI- 253
Query: 485 RYTQQWKKKVV----------FVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
W++ ++ VLNK D +A +++ I + NT +L I
Sbjct: 254 -----WREHLITESTDPDARLVVLNKIDTLWDALSTPAQIQTQIDRQRSNTADILGIPKE 308
Query: 531 TIYPVSARSTLEAKLS 546
+ VSA+ L AK++
Sbjct: 309 RVIAVSAQKGLVAKVT 324
>gi|167628812|ref|YP_001679311.1| dynamin family protein [Heliobacterium modesticaldum Ice1]
gi|167591552|gb|ABZ83300.1| dynamin family protein [Heliobacterium modesticaldum Ice1]
Length = 1353
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 406 FSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
F D + E++ C + Y C L + + +++VDTPG + I R + +++ +AD
Sbjct: 799 FQDYVASEEKACFVEWIELYYRCPLTA---RGVMLVDTPGADSINARHTGVAFDYIKKAD 855
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKE 519
+LFV + + ++ FL + K K+ F++N +DL ++A EL E V E
Sbjct: 856 AILFVTYFNSAFSHADRDFLFQLGRVKDSFGLDKMFFLINAADLARSAGELAEVQRHVAE 915
Query: 520 NTMKLLNIENVTIYPVSARSTLEAKL 545
+ I +Y VS+++ L A+L
Sbjct: 916 R-ITACGISKPRLYTVSSQTALLARL 940
>gi|154336447|ref|XP_001564459.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061494|emb|CAM38523.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 544
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDG 423
PF+ +G +++GKSS IN LL YL G P T++ T + + + + + R G
Sbjct: 70 PFV-TFLGPFSAGKSSFINYLLQGDYLLTGPQPVTDKFTVVMYGERSQQIPGRVLMADSG 128
Query: 424 QYICYL----------------PSPILKEMIIVDTPGT-----NVILQRQQ--RLTEEFV 460
Q L P P+L+ + VDTPG + +R + FV
Sbjct: 129 QPFRGLSQFGDAFAEFFAGVLAPHPLLRSVSFVDTPGVLEAAGDAHFRRYDYIEVCRWFV 188
Query: 461 PRADLVLFVISADRPLTESEV--VFLRYTQQWKKKVVFVLNKSD 502
++DLV F+ + +E+ VF + + + K+ V+NK+D
Sbjct: 189 EKSDLVFFLFDPTKLDAGAELRQVFGKALRHHESKIRIVMNKAD 232
>gi|392413158|ref|YP_006449765.1| putative GTPase [Desulfomonile tiedjei DSM 6799]
gi|390626294|gb|AFM27501.1| putative GTPase [Desulfomonile tiedjei DSM 6799]
Length = 577
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 347 LMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDG-VVPTTNEITFLR 405
L+E+ L + + E + I+G GKS++INAL GK+ + P T+ R
Sbjct: 33 LLEKTEKLREKAEKPGEALYVGILGGTGVGKSTLINALAGKQISQSSDRRPYTDRAVVYR 92
Query: 406 FSDLAS--EEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA 463
+ A +E R PD + S ++++I++D P + +R + + E+ +P
Sbjct: 93 HRNTARGLDEIAGLVRDPDALH----DSESVRDLILLDLPDFDSTEERNRIVVEKILPFL 148
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
D ++V++ ++ + FL T ++ F+LNKSD
Sbjct: 149 DAAIWVVTPEKYADSAFYRFLNRTVIHRENFTFILNKSD 187
>gi|229090634|ref|ZP_04221867.1| Reticulocyte binding protein [Bacillus cereus Rock3-42]
gi|228692576|gb|EEL46302.1| Reticulocyte binding protein [Bacillus cereus Rock3-42]
Length = 1219
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGIALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQS 221
>gi|220910499|ref|YP_002485810.1| small GTP-binding protein [Cyanothece sp. PCC 7425]
gi|219867110|gb|ACL47449.1| small GTP-binding protein [Cyanothece sp. PCC 7425]
Length = 566
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 41/156 (26%)
Query: 367 LVIVGEYNSGKSSVINALLGK----------------RYLKDGVVPTTN-EITFLRFSDL 409
+ + G GKSS++NALLG+ R L G+ P T + + LR S L
Sbjct: 158 IAVFGMVGRGKSSLLNALLGRDIFVTGPIHGVTRNSDRALWAGIDPLTGKQQSGLRIS-L 216
Query: 410 ASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLF 468
Q R E ++DTPG + V +++++L + +ADL+LF
Sbjct: 217 QGVGQSRIE--------------------LIDTPGIDEVDGEKREQLARQVAKQADLILF 256
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
VIS D +T+ E L +Q K ++ V NK D Y
Sbjct: 257 VISGD--MTKVEHRALTELRQASKPILLVFNKIDQY 290
>gi|325660826|ref|ZP_08149454.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472900|gb|EGC76110.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae bacterium
4_1_37FAA]
Length = 217
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 102 LDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNAS 160
L ++EA V +V L EA GK E A L+K + + +I +RVD+A A +A+
Sbjct: 26 LRTVEEACKGGVTLVQLREKEAGGKEYLEKAILVKKITDRYGVPLIIDDRVDVAIACDAA 85
Query: 161 GVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
GV + LP VAR + +VG +T++AA A EGAD+L
Sbjct: 86 GVHVGASDLPVAVARKLLGPE-------KIVGATAKTVEAAKKA-WEEGADYL 130
>gi|416397117|ref|ZP_11686564.1| Small GTP-binding protein domain [Crocosphaera watsonii WH 0003]
gi|357262826|gb|EHJ11908.1| Small GTP-binding protein domain [Crocosphaera watsonii WH 0003]
Length = 447
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 26/136 (19%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
G + GKS+VINAL+G+ L+ G + + P Q +C+ P
Sbjct: 66 GLVSRGKSAVINALIGQNILESGPI-------------------HGVTKWP--QSVCWTP 104
Query: 431 SPILKEMIIVDTPGTNVI--LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ 488
++ +DTPG + I ++R + ++ ADL+LFVIS D +T SE L +
Sbjct: 105 PNGEVKVEFIDTPGLDEIDGIER-EIMSRNIADEADLILFVISED--ITRSEYEALLDLK 161
Query: 489 QWKKKVVFVLNKSDLY 504
+ K ++ V NK DLY
Sbjct: 162 KALKPIILVFNKIDLY 177
>gi|428224150|ref|YP_007108247.1| small GTP-binding protein [Geitlerinema sp. PCC 7407]
gi|427984051|gb|AFY65195.1| small GTP-binding protein [Geitlerinema sp. PCC 7407]
Length = 470
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 28/159 (17%)
Query: 350 EVSLLIDAVSQIDEPFLLVIV-GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD 408
E+ LL + ++++++ + + G + GKS+++NAL+G++ + G + N +T S
Sbjct: 51 ELDLLQNLLTKLEQGLVRIAAFGLVSRGKSALLNALMGQKVFETGPL---NGVTQWPRS- 106
Query: 409 LASEEQQRCERHPDGQYICYLPSPILK-EMIIVDTPGTN-VILQRQQRLTEEFVPRADLV 466
+ +LPS K ++ ++DTPG + V + + + E +ADL+
Sbjct: 107 -----------------VRWLPSGGSKIQVELIDTPGLDEVAGETRAEMAREITRQADLI 149
Query: 467 LFVISADRPLTESEVVF-LRYTQQWKKKVVFVLNKSDLY 504
LFV+S D TE + LR Q K ++ V NK DLY
Sbjct: 150 LFVVSGDITRTEYRALCDLRAAQ---KPIILVFNKVDLY 185
>gi|344942118|ref|ZP_08781406.1| GTP-binding protein HSR1-like protein [Methylobacter tundripaludum
SV96]
gi|344263310|gb|EGW23581.1| GTP-binding protein HSR1-like protein [Methylobacter tundripaludum
SV96]
Length = 505
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 26/119 (21%)
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ 415
+A Q EP L++VG+ +SGKSS+INAL G+ +G++PTT EIT
Sbjct: 265 EAHDQSIEPLRLLVVGQVSSGKSSLINALFGEIKSAEGLLPTTAEITPYLL--------- 315
Query: 416 RCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQ--QRLTEEFVPRADLVLFVISA 472
ER DG L++ II+D+ G ++ Q + L +E+ + D++L V +A
Sbjct: 316 --ER--DG----------LQQAIILDSAGYGGLMHDQAPEALMQEWT-KVDVILMVCNA 359
>gi|300121403|emb|CBK21783.2| unnamed protein product [Blastocystis hominis]
Length = 449
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC-------- 417
++ ++G ++SGKS+ IN + G GV PT + T + D S + R
Sbjct: 3 VVFLLGNHSSGKSTFINYITGAEVQHTGVAPTDDSFTVIVPGDETSTKDGRTLVDDPDFG 62
Query: 418 ---ERHPDGQYICYLPSPI-----LKEMIIVDTPGT----NVILQRQQ---------RLT 456
+H ++ +L + K++I+VD+PG ++ L + +T
Sbjct: 63 FGGLQHFGLSFLSHLSMKVRNDIRTKDIILVDSPGMIDNPSLGLTKNSSHDRGYDFMSVT 122
Query: 457 EEFVPRADLVLFVISADRPLTESEVV--FLRYTQQWKKKVVFVLNKSDLYQNAFELEEAI 514
+ F +AD++LF D+P T E + + Q K+ +LNK D + + A
Sbjct: 123 KWFADKADVILFFFDPDKPGTTGETLQALTQALQGQDAKLRIILNKVDQFSKVHDFGRAY 182
Query: 515 SFVKENTMKLL 525
+ N K++
Sbjct: 183 GALAWNLAKVI 193
>gi|428308862|ref|YP_007119839.1| small GTP-binding protein domain-containing protein [Microcoleus
sp. PCC 7113]
gi|428250474|gb|AFZ16433.1| small GTP-binding protein domain protein [Microcoleus sp. PCC 7113]
Length = 487
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI--CY 428
G GKSSV+NALLG + G + R S A+ + + +GQ I
Sbjct: 80 GMVGRGKSSVLNALLGTPVFETGALHGVT-----RSSHTANWQLSQEAVGDNGQDILRVA 134
Query: 429 LPSPILKEMI-IVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRY 486
LPS I + ++DTPG + V + ++ L + + DL+LF+I+ D +T+ E L
Sbjct: 135 LPSSIGNSQVQLIDTPGIDEVDGETREALAHQVARQVDLILFMIAGD--MTKVEFDALSQ 192
Query: 487 TQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
+ K ++ V NK D Y A E E +LL+ E + + S
Sbjct: 193 LRNVGKPMLLVFNKIDQYPEADRQEIYRKIRDERVKQLLSPEEIVMVAAS 242
>gi|300022385|ref|YP_003754996.1| ribosome-associated GTPase EngA [Hyphomicrobium denitrificans ATCC
51888]
gi|299524206|gb|ADJ22675.1| ribosome-associated GTPase EngA [Hyphomicrobium denitrificans ATCC
51888]
Length = 460
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 45/206 (21%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDG 423
P + IVG N+GKS+++NALLG+ + G P L +ASE + G
Sbjct: 193 PIRVAIVGRPNAGKSTLVNALLGEDRMITGPEPG------LTRDSVASELSYK------G 240
Query: 424 QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTE-----------EFVPRADLVLFVISA 472
Q I ++ DT G L+R+ ++TE + A++V+ +I A
Sbjct: 241 QSI-----------LLFDTAG----LRRKAKITETAEKLAASDAVRSIRFAEVVVLLIDA 285
Query: 473 DRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMK-LLNIENVT 531
+RP ++ + + +V +NK DL E ++A+ +K+ + L + NV+
Sbjct: 286 ERPFEHQDLTIGHRVTEEGRALVVAINKWDLIP---EKQKALRELKKTVAESLAQVPNVS 342
Query: 532 IYPVSARSTLEAKL-SVSSAVGKDHS 556
+ +SARS E+ L + SA+ K H+
Sbjct: 343 VVAISARS--ESGLDQLMSAIIKTHA 366
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
++ IVG N GKS++ N L G R SDL + R + D
Sbjct: 1 MVAIVGRPNVGKSTLFNRLTGTRAAL--------------VSDLPGLTRDRRDGVTDLFG 46
Query: 426 ICYLPSPILKEMIIVDTPG-----TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
+ + ++DT G I R ++ TE+ + ADLVLFVI A +T ++
Sbjct: 47 V---------NLRLIDTAGLEEARQGSIADRMRKQTEQAIEAADLVLFVIDARAGVTGAD 97
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISF 516
F R +Q K VV V NK++ + + +A S
Sbjct: 98 TSFARIARQSGKPVVLVANKAEGRKGTDGVLDAFSL 133
>gi|448600731|ref|ZP_21656110.1| thiamine-phosphate pyrophosphorylase [Haloferax alexandrinus JCM
10717]
gi|445734744|gb|ELZ86300.1| thiamine-phosphate pyrophosphorylase [Haloferax alexandrinus JCM
10717]
Length = 210
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
G D++ AV + +V L AS + YE L++V D + L+ +RVDIAA
Sbjct: 13 GGRSTPDVVRAAVDGGIDVVQLREKHASARDRYEVGRELRAVTADAGVPLVVNDRVDIAA 72
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + + +VGR+V T+
Sbjct: 73 AIDADGVHLGDDDVPVSVAREQLGEG-------AIVGRSVSTV 108
>gi|428205620|ref|YP_007089973.1| small GTP-binding protein [Chroococcidiopsis thermalis PCC 7203]
gi|428007541|gb|AFY86104.1| small GTP-binding protein [Chroococcidiopsis thermalis PCC 7203]
Length = 478
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG++ + G + T ++ E +R Y+
Sbjct: 75 IAVFGMVGRGKSSLLNALLGQQVFETGPLHGVTRSTQKAQWEVTEETIGAGDR-----YV 129
Query: 427 CY-LPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ LPS ++ ++DTPG + V + + L + RADL+LF I+ D +T+ E L
Sbjct: 130 KFTLPSSGDSQVELIDTPGLDEVDGETRAALAAQIANRADLILFAIAGD--MTQVEHKAL 187
Query: 485 RYTQQWKKKVVFVLNKSDLYQNA 507
+ K ++ V NK D Y A
Sbjct: 188 SQLRDVGKPILLVFNKIDQYPQA 210
>gi|75907766|ref|YP_322062.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75701491|gb|ABA21167.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 517
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 28/151 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NA++G+ K T ++ G+
Sbjct: 134 VVVFGTGSAGKTSLVNAIMGRMVGKVDAPMGTTQV---------------------GETY 172
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
C + ++++I DTPG V +++L ADL+LFV+ D L SE
Sbjct: 173 CLRLKGLERKILITDTPGILEAGVAGTEREQLARALATEADLLLFVV--DNDLRRSEYEP 230
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAI 514
L+ + K+ + VLNK+DLY + E +EAI
Sbjct: 231 LKSLAEIGKRSLLVLNKTDLYTD--EDKEAI 259
>gi|224476564|ref|YP_002634170.1| hypothetical protein Sca_1077 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421171|emb|CAL27985.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 1148
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD----LASEEQQRCERH 420
F L VG +++GKS++IN LL + L VPTT+ + SD +A+ E Q+ +
Sbjct: 41 FTLTFVGHFSAGKSTLINLLLEQEILPSSPVPTTSNTAIVSVSDESEIIANLEGQKYTKL 100
Query: 421 PDGQYICYL---------------PSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADL 465
D + + L + K + DTPG + + Q TE+F+ +++
Sbjct: 101 SDYEEVKQLNRQNGDVESVEIKFDSNKFNKGFTLQDTPGVDSNVSLHQASTEQFMFTSNI 160
Query: 466 VLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
V + + + + F++ VVFV+N+ D
Sbjct: 161 VFYTVDYNHVQSAMNFQFMKRLNHAGIPVVFVINQID 197
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 332 SVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLV-IVGEYNSGKSSVINALLGKRYL 390
SV+ + ID+I+ + L A+ ++D+ + + + G +++GKSS+INALLG YL
Sbjct: 559 SVIKQGIDIIEPVPLFQQTKDDLNAAIERMDQQIVKIGVFGTFSAGKSSLINALLGDNYL 618
Query: 391 KDGVVPTTNEITFLRFSD-----LASEEQ 414
PTT T L + D L EEQ
Sbjct: 619 VSSPNPTTAATTELSYGDSIAITLKKEEQ 647
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 429 LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ 488
LP LK IIVD+ G QR TE+ + +DL+L+V + T+++ F+ Y +
Sbjct: 736 LPIDWLKNKIIVDSLGLYSNNQRHSNETEKILTSSDLILYVSYFNHSFTDNDKAFIEYMK 795
Query: 489 ---QWKKKVVF--VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
Q + F ++N DL ++ +LE +V + ++ +N+ IY VS+R +L
Sbjct: 796 EMNQLNENQTFKMIINAVDLAESQSDLEAVEDYVSD-ALEQVNMP-ADIYSVSSRRSL 851
>gi|121603813|ref|YP_981142.1| hypothetical protein Pnap_0904 [Polaromonas naphthalenivorans CJ2]
gi|120592782|gb|ABM36221.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
Length = 658
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ + P+LK+ ++I+DTPG N I + LT +P+A V+F+++AD +T+S++
Sbjct: 194 LINIAHPLLKQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVFILAADTGVTKSDLSIW 252
Query: 485 R----YTQQWKKKVVFVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENVTIYPVS 536
R + + VLNK D +A E++ I + + ++L + + PVS
Sbjct: 253 REHLASGGEGSDTRLVVLNKIDTLWDALSTPEEVQAQIDRQRATSAEILGLPLSQVIPVS 312
Query: 537 ARSTLEAKLS 546
A+ L AK++
Sbjct: 313 AQKGLVAKVT 322
>gi|383808740|ref|ZP_09964276.1| dynamin family protein [Rothia aeria F0474]
gi|383448485|gb|EID51446.1| dynamin family protein [Rothia aeria F0474]
Length = 591
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------- 408
+D P +V+ G +GKS+++N+LLG+ + G + PTT + L ++
Sbjct: 53 LDAPLTVVVGGSTGAGKSTLVNSLLGEPLTRAGAIRPTTRQPVLLHRAEDAPYLGSEHYL 112
Query: 409 --------LASEEQQRCERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEF 459
A E + H + + L + + I ++D P + + ++ +RL ++
Sbjct: 113 PSMRHHSVAAGETVPGADAHTEADVLVTLQTQTVPPGIALIDAPDIDSVSEQNRRLAKDL 172
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
+ ADL LFV +A+R L + V +LN+
Sbjct: 173 LSAADLWLFVTTANRYADAVPWELLHRAAERNITVAVILNR 213
>gi|319789901|ref|YP_004151534.1| dynamin family protein [Thermovibrio ammonificans HB-1]
gi|317114403|gb|ADU96893.1| dynamin family protein [Thermovibrio ammonificans HB-1]
Length = 677
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 64/190 (33%)
Query: 359 SQID-EPFLLVIVGEYNSGKSSVINALLGKR-YLKDGVVPTTNEITFLRF---------- 406
S++D E F + G+ +GKS+++NAL+ ++ L + P T ++T +++
Sbjct: 35 SELDREEFTVSFCGQIKAGKSTLLNALIFRKPVLPSKITPHTAKLTLIKYGEKLKFKVNF 94
Query: 407 -SDLASEEQQRCER----------------------HPD--------------------- 422
S +E Q+ E+ +PD
Sbjct: 95 YSQKEWKELQKVEKDGEKYFDKYLKEEVNKRITKGIYPDSVLGTSKEIRELKELNKFVGA 154
Query: 423 -GQYI-------CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
G+Y Y P+PILKE+ IVDTPGTN + T++++ ++ V++V+ A +
Sbjct: 155 DGEYTPFVKEITIYYPNPILKELTIVDTPGTNDPNPLRSEETKKWIKNSNAVVYVVYAGQ 214
Query: 475 PLTESEVVFL 484
+E ++ F+
Sbjct: 215 AFSEPDIEFI 224
>gi|189030330|sp|A8IGE6.2|THIE_AZOC5 RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
Length = 212
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 102 LDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNAS 160
L+ ++EAVA V +V L EA G+++ E A L +++ + + +I +RVD+AAAV A
Sbjct: 24 LETVEEAVAGGVTLVQLRDPEAKGRALAEEARALIGLLRPKGIPLIINDRVDVAAAVGAE 83
Query: 161 GVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVC--CFG 218
GV L L AR + ++G +V +L+ +AS+ D++ C
Sbjct: 84 GVHLGQDDLDPAAARAILGPD-------AIIGLSVGSLE-ELSASNLGPVDYVGCGPINA 135
Query: 219 EGQKADV-----IENSLF--TNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
G K D IE F +++ +P+ + D +++GA+G +
Sbjct: 136 TGTKGDAGGAIGIEGFAFLRSHIALPMVGIGGLKAEDAEAVMQAGANGIAV 186
>gi|221068912|ref|ZP_03545017.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
gi|220713935|gb|EED69303.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
Length = 665
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 30/143 (20%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+FV+ AD +T+S++
Sbjct: 196 LINMPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFVLGADTGVTKSDLAI- 253
Query: 485 RYTQQWKKKV------------------VFVLNKSDLYQNAF----ELEEAISFVKENTM 522
W+ V + VLNK D ++ +++ + ++++
Sbjct: 254 -----WRDHVLPAGAGKVGDDEALAASRLVVLNKVDTLWDSLSSGAQVQAQLRRQQQDSA 308
Query: 523 KLLNIENVTIYPVSARSTLEAKL 545
+LL + + PVSA+ L AK+
Sbjct: 309 QLLGVALERVLPVSAQKGLVAKV 331
>gi|65318935|ref|ZP_00391894.1| COG0699: Predicted GTPases (dynamin-related) [Bacillus anthracis
str. A2012]
Length = 1219
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|299531518|ref|ZP_07044924.1| hypothetical protein CTS44_12033 [Comamonas testosteroni S44]
gi|298720481|gb|EFI61432.1| hypothetical protein CTS44_12033 [Comamonas testosteroni S44]
Length = 665
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 36/159 (22%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+FV+ AD +T+S++
Sbjct: 196 LINMPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFVLGADTGVTKSDLAI- 253
Query: 485 RYTQQWKKKV------------------VFVLNKSDLYQNAF----ELEEAISFVKENTM 522
W+ V + VLNK D ++ +++ + ++++
Sbjct: 254 -----WRDHVLPAGAGKAGGDDALAASRLVVLNKVDTLWDSLSSGAQVQAQLRRQQQDSA 308
Query: 523 KLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVN 561
+LL + + P+SA+ L AK VG++ S L +
Sbjct: 309 QLLGVALERVLPISAQKGLVAK------VGRNDSLLQAS 341
>gi|229144273|ref|ZP_04272687.1| Reticulocyte binding protein [Bacillus cereus BDRD-ST24]
gi|228639281|gb|EEK95697.1| Reticulocyte binding protein [Bacillus cereus BDRD-ST24]
Length = 1210
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCVLTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMDHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 272 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESYVRNEFIKGLQ 329
>gi|448606091|ref|ZP_21658670.1| thiamine-phosphate pyrophosphorylase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445739508|gb|ELZ91015.1| thiamine-phosphate pyrophosphorylase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 210
Score = 50.8 bits (120), Expect = 0.003, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
AG D++ AV V +V L AS + Y +++V D + L+ +RVDIAA
Sbjct: 13 AGRSTPDVVRAAVDGGVDVVQLREKHASARDRYAVGREVRAVTADAGVPLVVNDRVDIAA 72
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + D +VGR+V T+
Sbjct: 73 AIDADGVHLGDDDVPVSVAREQLGDD-------AIVGRSVSTV 108
>gi|406974899|gb|EKD97836.1| hypothetical protein ACD_23C00716G0001 [uncultured bacterium]
Length = 653
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
I +P P+LK+ ++I+DTPG N + + LT +P+A V+F++SAD +T S++
Sbjct: 196 IINIPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFILSADTGVTRSDLSI- 253
Query: 485 RYTQQWKKKV----------VFVLNKSD-LYQNAFELEEAISFVKENTMK---LLNIENV 530
W++ + + VLNK D L+ +E ++ + M +L +
Sbjct: 254 -----WREHLATSVDSLDARLVVLNKIDTLWDTLNSPDEILAQMNRQCMTSADMLGVPLQ 308
Query: 531 TIYPVSARSTLEAKLS 546
+ PVSA+ L AK++
Sbjct: 309 QVVPVSAQKGLVAKIT 324
>gi|264676955|ref|YP_003276861.1| hypothetical protein CtCNB1_0819 [Comamonas testosteroni CNB-2]
gi|262207467|gb|ACY31565.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 665
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 36/159 (22%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+FV+ AD +T+S++
Sbjct: 196 LINMPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFVLGADTGVTKSDLAI- 253
Query: 485 RYTQQWKKKV------------------VFVLNKSDLYQNAF----ELEEAISFVKENTM 522
W+ V + VLNK D ++ +++ + ++++
Sbjct: 254 -----WRDHVLPAGAGKAGGDDALAASRLVVLNKVDTLWDSLSSGAQVQAQLRRQQQDSA 308
Query: 523 KLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVN 561
+LL + + P+SA+ L AK VG++ S L +
Sbjct: 309 QLLGVALERVLPISAQKGLVAK------VGRNDSLLQAS 341
>gi|157692707|ref|YP_001487169.1| hypothetical protein BPUM_1939 [Bacillus pumilus SAFR-032]
gi|157681465|gb|ABV62609.1| hypothetical protein BPUM_1939 [Bacillus pumilus SAFR-032]
Length = 1199
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 427 CYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
YL +P+ K + IVDTPG + + +R + +++ AD +L++ ++++ FLR
Sbjct: 766 VYLSTPLTDKGLTIVDTPGASSMNKRHTEIAFQYMKDADALLYLTYYQHSFSKADRSFLR 825
Query: 486 YTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
K K+ F++N +DL ++ EL+ +VK N + I N ++ VS++
Sbjct: 826 KLGLVKDSFSMDKMFFIINAADLAKDQAELDTVFDYVK-NELTKEGIRNPNLHHVSSKEE 884
Query: 541 LEAK 544
++ K
Sbjct: 885 IDGK 888
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL--------------RFS 407
+E + G Y++GKSS++N LL L +PT+ + + RF+
Sbjct: 42 EEEVYIAFTGHYSAGKSSLVNHLLHDHILPTSPIPTSANLVIVRKGESEVQLHTSDGRFA 101
Query: 408 DLA-SEEQQRCERH-PDGQYICYLP-----SPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
++ S +++ +R DG+ I + + + + ++DTPG + +
Sbjct: 102 KMSGSYDKEAVQRFCKDGEQIEMVEISGDYRGLEENVALIDTPGIDSTDHAHFLSAASIL 161
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLN---KSDLYQNAFE 509
+AD + +V+ + +E + F+R ++ + F++N + D ++ AFE
Sbjct: 162 HQADALFYVVHYNHVHSEENIRFIRSIKEKVPNLYFIVNQVDRHDEHETAFE 213
>gi|121612630|ref|YP_001000638.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005565|ref|ZP_02271323.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
81-176]
gi|419618019|ref|ZP_14151578.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
129-258]
gi|166200472|sp|A1VZU7.1|MNME_CAMJJ RecName: Full=tRNA modification GTPase MnmE
gi|87248887|gb|EAQ71850.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
81-176]
gi|380595851|gb|EIB16570.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
129-258]
Length = 442
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EENFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|218902782|ref|YP_002450616.1| hypothetical protein BCAH820_1665 [Bacillus cereus AH820]
gi|218539702|gb|ACK92100.1| conserved hypothetical protein [Bacillus cereus AH820]
Length = 1219
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|148240343|ref|YP_001225730.1| GTPase [Synechococcus sp. WH 7803]
gi|147848882|emb|CAK24433.1| GTPase [Synechococcus sp. WH 7803]
Length = 438
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NAL+G+ S +A++ C R Q
Sbjct: 52 IAVFGRVGVGKSSLVNALVGQ-------------------SLMATDVAHGCTRQ---QQS 89
Query: 427 CYLPSPI--LKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
P P+ L+ + +VDTPG + V + RL ADLVL V+ D +T+ E+
Sbjct: 90 TPWPKPVPGLQGVDLVDTPGIDEVDGPARARLAGRVAMNADLVLLVLDGD--ITQIELDA 147
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMK 523
L Q K V+ VLN+SD + A EL ++ +K K
Sbjct: 148 LATLQTKGKPVLTVLNRSDCW-PAEELAPLLASIKRRLPK 186
>gi|17231279|ref|NP_487827.1| hypothetical protein all3787 [Nostoc sp. PCC 7120]
gi|17132921|dbj|BAB75486.1| all3787 [Nostoc sp. PCC 7120]
Length = 516
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 28/151 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NA++G+ K T ++ G+
Sbjct: 134 VVVFGTGSAGKTSLVNAIMGRMVGKVDAPMGTTQV---------------------GETY 172
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
C + ++++I DTPG V +++L ADL+LFV+ D L SE
Sbjct: 173 CLRLKGLERKILITDTPGILEAGVAGTEREQLARALATEADLLLFVV--DNDLRRSEYEP 230
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAI 514
L+ + K+ + VLNK+DLY + E +EAI
Sbjct: 231 LKSLAEIGKRSLLVLNKTDLYTD--EDKEAI 259
>gi|428779620|ref|YP_007171406.1| small GTP-binding protein domain-containing protein
[Dactylococcopsis salina PCC 8305]
gi|428693899|gb|AFZ50049.1| small GTP-binding protein domain protein [Dactylococcopsis salina
PCC 8305]
Length = 484
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 324 KQLIETERSVLLEAIDVIKK-ASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVI 381
KQ ++ RS L++ ID+ ++ S L E++ L + ++++ + + G GKSSV+
Sbjct: 36 KQAQDSLRS-LVQQIDLTEEEQSGLESEINYLTAMLDKLEQSVVQIAAFGMVGRGKSSVL 94
Query: 382 NALLGKRYLK----DGVVPTTNEITF-LRFSDLASEEQQRCERHPDGQYICYLPSPILKE 436
NALLG+ + GV T + L L + EQ LPS
Sbjct: 95 NALLGENVFQTGPLHGVTRTIGSANWELTEESLGNSEQDVLR--------VSLPSHQQAS 146
Query: 437 MIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVV 495
+ +VDTPG + V + ++ + + +ADL+LF+I+ D +T+ E L ++ K ++
Sbjct: 147 VQLVDTPGIDEVDGETRELMAHQIAKQADLILFIIAGD--ITKVEYNALSRLREVGKPML 204
Query: 496 FVLNKSDLY 504
V NK D Y
Sbjct: 205 LVFNKIDQY 213
>gi|57093883|ref|XP_538591.1| PREDICTED: interferon-inducible GTPase 1-like [Canis lupus
familiaris]
gi|401871030|tpe|CBY66024.1| TPA: interferon-gamma-inducible GTPase IFGGB2 protein [Canis lupus
familiaris]
Length = 441
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 35/204 (17%)
Query: 347 LMEEVSLLIDAVSQIDE-PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN-EITFL 404
L S + DA+ ID P + + GE +GKSS INAL G + ++G PT E TFL
Sbjct: 52 LQSAFSAINDALRDIDNAPLNIAVTGESGTGKSSFINALRGMGHDEEGAAPTGPVETTFL 111
Query: 405 RFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRAD 464
R + +HP + + D PG + Q E+ V R
Sbjct: 112 R----------KAYKHPKFPNVTFW-----------DLPGIGTTSFQPQDYLEKMVFREY 150
Query: 465 LVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK--SDLYQ------NAFELEEAISF 516
+I A R ++V ++ KK FV +K SDLY F +E +
Sbjct: 151 DFFIIICATR-FKINDVQLATAIKKMKKNFYFVRSKVDSDLYNLKRIKPREFNKDEILQK 209
Query: 517 VKENTMKLL---NIENVTIYPVSA 537
++ + +K L N+ + ++ VS+
Sbjct: 210 IRNDCVKHLMEANMSDAQVFLVSS 233
>gi|381151812|ref|ZP_09863681.1| putative GTPase [Methylomicrobium album BG8]
gi|380883784|gb|EIC29661.1| putative GTPase [Methylomicrobium album BG8]
Length = 540
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERH-P 421
P L+ +G GKSS++N L GK + G+ PT+ E+T +A RH P
Sbjct: 52 PLLVAFMGGTGVGKSSLLNRLAGKAIARTGIERPTSREVTLYHHRSVAL-------RHLP 104
Query: 422 DGQYICYLPSP-----ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPL 476
+ I + + + +I +D P + I Q + L E++P D++++V+S +R
Sbjct: 105 EHLPIASVKTAPHDDEAKRHIIWIDMPDFDSIDQANRHLVLEWLPHIDVLIYVVSPERYR 164
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSD 502
E L + + +FVLN+ D
Sbjct: 165 DEKAWRLL-LAEGARHAWLFVLNQWD 189
>gi|325265091|ref|ZP_08131818.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
gi|324029781|gb|EGB91069.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
Length = 442
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 40/148 (27%)
Query: 367 LVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ IVG+ N GKSS+IN LLG+ R + V TT + E DG
Sbjct: 180 IAIVGKPNVGKSSIINKLLGENRVIVSDVAGTTRDAI-------------DTEILHDG-- 224
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF-----------VPRADLVLFVISADR 474
KE I +DT G L+R+ R+ EE V RAD+VL VI A+
Sbjct: 225 ---------KEYIFIDTAG----LRRKSRIKEELERYSIIRTVTAVERADVVLIVIDAEE 271
Query: 475 PLTESEVVFLRYTQQWKKKVVFVLNKSD 502
+TE + + K ++ V+NK D
Sbjct: 272 GVTEQDAKIAGIAHERGKGIIIVVNKWD 299
>gi|47566036|ref|ZP_00237074.1| reticulocyte binding protein [Bacillus cereus G9241]
gi|47556953|gb|EAL15283.1| reticulocyte binding protein [Bacillus cereus G9241]
Length = 1219
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 42/235 (17%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDE---------------PFLLVIVGEYNS 375
+ LLE + + K E++ L +A++QID+ FL + Y++
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDKVMKYPSPTGKQKTTFSFLRAVQKGYDT 737
Query: 376 GKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPIL 434
++A LG+R ++T FSD + E++ C + + Y C L
Sbjct: 738 -----VSAHLGERV----------QVTLEEFSDYVANEEKSCFVEYMELYYDCALTR--- 779
Query: 435 KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK--- 491
+ + +VDTPG + I R + +++ AD +LFV + + ++ FL + K
Sbjct: 780 QGVALVDTPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTF 839
Query: 492 --KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
K+ F++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 840 ALDKMFFLINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEYLMGE 279
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 280 H--FSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
>gi|86150688|ref|ZP_01068909.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596778|ref|ZP_01100015.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562575|ref|YP_002344354.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
NCTC 11168 = ATCC 700819]
gi|317511995|ref|ZP_07969251.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
305]
gi|384448208|ref|YP_005656259.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
IA3902]
gi|403055698|ref|YP_006633103.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
NCTC 11168-BN148]
gi|407942351|ref|YP_006857993.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
PT14]
gi|415730771|ref|ZP_11473202.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|419650627|ref|ZP_14181841.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|419658646|ref|ZP_14189259.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-1]
gi|419662218|ref|ZP_14192524.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-831]
gi|419676027|ref|ZP_14205275.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
110-21]
gi|419676638|ref|ZP_14205805.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
87330]
gi|419680755|ref|ZP_14209609.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
140-16]
gi|419691022|ref|ZP_14219207.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1893]
gi|419691587|ref|ZP_14219702.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1928]
gi|14195292|sp|Q9PNX9.1|MNME_CAMJE RecName: Full=tRNA modification GTPase MnmE
gi|85838869|gb|EAQ56137.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88191619|gb|EAQ95591.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360281|emb|CAL35076.1| putative tRNA modification GTPase [Campylobacter jejuni subsp.
jejuni NCTC 11168 = ATCC 700819]
gi|284926189|gb|ADC28541.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315927915|gb|EFV07238.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315928514|gb|EFV07818.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
305]
gi|380628229|gb|EIB46554.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|380633126|gb|EIB51132.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-1]
gi|380638644|gb|EIB56183.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-831]
gi|380650913|gb|EIB67513.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
110-21]
gi|380655842|gb|EIB72138.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
87330]
gi|380659749|gb|EIB75716.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
140-16]
gi|380667873|gb|EIB83275.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1893]
gi|380671985|gb|EIB87173.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1928]
gi|401781350|emb|CCK67053.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
NCTC 11168-BN148]
gi|407906189|gb|AFU43018.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
PT14]
Length = 442
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EENFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|229121212|ref|ZP_04250449.1| Reticulocyte binding protein [Bacillus cereus 95/8201]
gi|228662331|gb|EEL17934.1| Reticulocyte binding protein [Bacillus cereus 95/8201]
Length = 1219
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|339496006|ref|YP_004716299.1| GTPase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|386022691|ref|YP_005940716.1| GTPase [Pseudomonas stutzeri DSM 4166]
gi|327482664|gb|AEA85974.1| GTPase [Pseudomonas stutzeri DSM 4166]
gi|338803378|gb|AEJ07210.1| GTPase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 655
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A ++F++SAD +T S++ ++ ++ +Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAIVFLLSADTGVTASDMQIWQQHIRQ 258
Query: 490 W----KKKVVFVLNKSDLYQN-----AFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
+ + VLNK D+ + AF + AI ++E T + L I+ + P+SA+
Sbjct: 259 LDEDTQNSLFAVLNKIDVLWDDVAGEAF-VHNAIEQIRETTAQQLGIDAADVLPLSAKQA 317
Query: 541 LEAKLSVSSAV 551
L AK+ A+
Sbjct: 318 LMAKIRGDQAL 328
>gi|228900251|ref|ZP_04064482.1| Reticulocyte binding protein [Bacillus thuringiensis IBL 4222]
gi|228859420|gb|EEN03849.1| Reticulocyte binding protein [Bacillus thuringiensis IBL 4222]
Length = 1210
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 212 SFSNWDIEVDGVYYTSLR 229
>gi|448568966|ref|ZP_21638378.1| thiamine-phosphate pyrophosphorylase [Haloferax lucentense DSM
14919]
gi|445725116|gb|ELZ76741.1| thiamine-phosphate pyrophosphorylase [Haloferax lucentense DSM
14919]
Length = 210
Score = 50.8 bits (120), Expect = 0.004, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
G D++ AV + +V L AS + YE L++V D + L+ +RVDIAA
Sbjct: 13 GGRSTPDVVRAAVDGGIDVVQLREKHASARDRYEVGRELRAVTADAGVPLVVNDRVDIAA 72
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + + +VGR+V T+
Sbjct: 73 AIDADGVHLGDDDVPVSVAREQLGEG-------AIVGRSVSTV 108
>gi|448290790|ref|ZP_21481935.1| thiamine-phosphate pyrophosphorylase [Haloferax volcanii DS2]
gi|445577843|gb|ELY32263.1| thiamine-phosphate pyrophosphorylase [Haloferax volcanii DS2]
Length = 210
Score = 50.8 bits (120), Expect = 0.004, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
G D++ AV + +V L AS + YE L++V D + L+ +RVDIAA
Sbjct: 13 GGRSTPDVVRAAVDGGIDVVQLREKHASARDRYEVGRELRAVTADAGVPLVVNDRVDIAA 72
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + + +VGR+V T+
Sbjct: 73 AIDADGVHLGDDDVPVSVAREQLGEG-------AIVGRSVSTV 108
>gi|423111756|ref|ZP_17099450.1| small GTP-binding protein domain [Klebsiella oxytoca 10-5243]
gi|376375854|gb|EHS88639.1| small GTP-binding protein domain [Klebsiella oxytoca 10-5243]
Length = 291
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 29/152 (19%)
Query: 369 IVGEYNSGKSSVINALL-GKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYIC 427
I+G+ +GKSS+ N L G+ V T ++ LRF + RH
Sbjct: 41 IMGKSGAGKSSLCNELFRGEVSPVSDVNACTRDV--LRFRLCSG-------RH------- 84
Query: 428 YLPSPILKEMIIVDTPGTNVILQRQQR---LTEEFVPRADLVLFVISAD-RPLTESEVVF 483
++IVD PG +R L +P DLVL+VI AD R LT E +
Sbjct: 85 --------SLVIVDLPGVGENGRRDHEYRALYRRMLPELDLVLWVIKADDRALTLDEQFW 136
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
L Q +++KV+FV+N++D + +E + S
Sbjct: 137 LGVMQPYRQKVLFVINQADKIEPCYEWDTLTS 168
>gi|283954515|ref|ZP_06372034.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
414]
gi|283793919|gb|EFC32669.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
414]
Length = 442
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + I+G+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIIGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ I Q L+++ + AD++L V A R E + + + KK+ ++LNK+DL +
Sbjct: 277 DTIEQIGVALSKKSLEDADIILAVFDASRKEDEEDKKIFKLLENIDKKIFWILNKTDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
+ FE + +F+K + K
Sbjct: 336 SIFENTQNKNFIKLSAQK 353
>gi|228920381|ref|ZP_04083727.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423579862|ref|ZP_17555973.1| hypothetical protein IIA_01377 [Bacillus cereus VD014]
gi|228839303|gb|EEM84598.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401217317|gb|EJR24011.1| hypothetical protein IIA_01377 [Bacillus cereus VD014]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 129/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQCVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|228914246|ref|ZP_04077862.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228945270|ref|ZP_04107626.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228814505|gb|EEM60770.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228845450|gb|EEM90485.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 1210
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 193
>gi|419622828|ref|ZP_14156047.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23216]
gi|380598390|gb|EIB18801.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23216]
Length = 442
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSRKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDKKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|365900599|ref|ZP_09438469.1| hypothetical protein BRAO3843_570067 [Bradyrhizobium sp. STM 3843]
gi|365418716|emb|CCE11011.1| hypothetical protein BRAS3843_570067 [Bradyrhizobium sp. STM 3843]
Length = 881
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 23/155 (14%)
Query: 365 FLLVIVGEYNSGKSSVINALLG----KRYLKDGVVPTTNEITFLRFSDLAS------EEQ 414
F + +VG ++SGKSS IN++L +R + + PT IT + A E
Sbjct: 70 FYVGLVGHFSSGKSSTINSILNIWGSERERETDLNPTDTTITLITNEGNAKSLLGVIREG 129
Query: 415 QRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADR 474
RH + + +L++++I DTPG+ Q + + +F+P D++LF SA
Sbjct: 130 HVTIRHES------VDNDLLQKIVIADTPGSGDT-QFVEEVARDFLPICDVILFFFSATS 182
Query: 475 PLTESEVVFLRYTQQWKK----KVVFVLNKSDLYQ 505
PL ++++ L T+ KK + FV+ ++D ++
Sbjct: 183 PLDKTDLPLL--TEIHKKLRFIPIRFVVTRADEFR 215
>gi|376003287|ref|ZP_09781100.1| putative GTPase [Arthrospira sp. PCC 8005]
gi|375328317|emb|CCE16853.1| putative GTPase [Arthrospira sp. PCC 8005]
Length = 465
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 15/139 (10%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG+ G T+ IT R ++ ++ Q +P G
Sbjct: 68 IAVFGMVGRGKSSILNALLGQTVFATG---PTHGIT--RTTE--AKPWQVEGENPTGAM- 119
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
S + ++ ++DTPG + V Q ++++ + +ADL+LFVI+ D +T+ E L
Sbjct: 120 ----SYRISQVELIDTPGIDEVDGQTREQMARQVAEKADLLLFVIAGD--ITQVEYQALS 173
Query: 486 YTQQWKKKVVFVLNKSDLY 504
+ + K ++ V NK D Y
Sbjct: 174 WLRDAGKPMLLVFNKIDQY 192
>gi|196039111|ref|ZP_03106418.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|196030256|gb|EDX68856.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|165869449|ref|ZP_02214108.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|227815581|ref|YP_002815590.1| hypothetical protein BAMEG_2998 [Bacillus anthracis str. CDC 684]
gi|254755156|ref|ZP_05207190.1| hypothetical protein BantV_22022 [Bacillus anthracis str. Vollum]
gi|164714889|gb|EDR20407.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|227003655|gb|ACP13398.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|146284281|ref|YP_001174434.1| GTPase [Pseudomonas stutzeri A1501]
gi|145572486|gb|ABP81592.1| predicted GTPase [Pseudomonas stutzeri A1501]
Length = 653
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 13/131 (9%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A ++F++SAD +T S++ ++ ++ +Q
Sbjct: 198 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAIVFLLSADTGVTASDMQIWQQHIRQ 256
Query: 490 W----KKKVVFVLNKSDLYQN-----AFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
+ + VLNK D+ + AF + AI ++E T + L I+ + P+SA+
Sbjct: 257 LDEDTQNSLFAVLNKIDVLWDDVAGEAF-VHNAIEQIRETTAQQLGIDAADVLPLSAKQA 315
Query: 541 LEAKLSVSSAV 551
L AK+ A+
Sbjct: 316 LMAKIRGDQAL 326
>gi|419652480|ref|ZP_14183556.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-894]
gi|380629274|gb|EIB47544.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-894]
Length = 442
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I I ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTICEENSKILKEIYTLSQSKKGLIEGFKITIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ I Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DTIEQIGVALSKKSLEDADIILAVFDASRVQDKEDGKIFELLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|418422448|ref|ZP_12995621.1| isoniazid inducible protein IniC [Mycobacterium abscessus subsp.
bolletii BD]
gi|363996364|gb|EHM17581.1| isoniazid inducible protein IniC [Mycobacterium abscessus subsp.
bolletii BD]
Length = 497
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGK--------------RYLKDGVVPTTNEITF- 403
+++DEP + I G N+GKS+++NAL+G+ + + G P F
Sbjct: 39 ARLDEPIRVAIAGTLNAGKSTLVNALVGEDIAPTDATEATRIVAWFRHGAAPRVTANLFS 98
Query: 404 -------LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNV----ILQRQ 452
+R S E R + P+P L E+ ++DTPGT+ + +R
Sbjct: 99 GVRQDIPIRREGGLSFELDRLDPASVADLDVNWPAPELNEITLIDTPGTSSLSTDVSERS 158
Query: 453 QRLT--EEFVPRADLVLFVISADRPLTESEVVFL 484
L E+ VPR D V+F++ R L +++ L
Sbjct: 159 LALLVPEDGVPRVDAVIFLL---RSLNAADIGLL 189
>gi|292656787|ref|YP_003536684.1| thiamine-phosphate pyrophosphorylase [Haloferax volcanii DS2]
gi|291371619|gb|ADE03846.1| thiamine-phosphate pyrophosphorylase [Haloferax volcanii DS2]
Length = 214
Score = 50.8 bits (120), Expect = 0.004, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
G D++ AV + +V L AS + YE L++V D + L+ +RVDIAA
Sbjct: 17 GGRSTPDVVRAAVDGGIDVVQLREKHASARDRYEVGRELRAVTADAGVPLVVNDRVDIAA 76
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + + +VGR+V T+
Sbjct: 77 AIDADGVHLGDDDVPVSVAREQLGEG-------AIVGRSVSTV 112
>gi|148926123|ref|ZP_01809809.1| putative thiophene and furan oxidation protein [Campylobacter
jejuni subsp. jejuni CG8486]
gi|419648480|ref|ZP_14179819.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 9217]
gi|145845602|gb|EDK22694.1| putative thiophene and furan oxidation protein [Campylobacter
jejuni subsp. jejuni CG8486]
gi|380626309|gb|EIB44786.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 9217]
Length = 442
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|30261667|ref|NP_844044.1| hypothetical protein BA_1595 [Bacillus anthracis str. Ames]
gi|49184496|ref|YP_027748.1| hypothetical protein BAS1479 [Bacillus anthracis str. Sterne]
gi|50196928|ref|YP_052622.1| hypothetical protein GBAA_1595 [Bacillus anthracis str. 'Ames
Ancestor']
gi|167633418|ref|ZP_02391743.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167639051|ref|ZP_02397324.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686152|ref|ZP_02877374.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706400|ref|ZP_02896860.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650521|ref|ZP_02933488.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568599|ref|ZP_03021504.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|229602773|ref|YP_002866074.1| hypothetical protein BAA_1664 [Bacillus anthracis str. A0248]
gi|254683157|ref|ZP_05147018.1| hypothetical protein BantC_04795 [Bacillus anthracis str.
CNEVA-9066]
gi|254723745|ref|ZP_05185531.1| hypothetical protein BantA1_14943 [Bacillus anthracis str. A1055]
gi|254734505|ref|ZP_05192217.1| hypothetical protein BantWNA_04960 [Bacillus anthracis str. Western
North America USA6153]
gi|254740918|ref|ZP_05198606.1| hypothetical protein BantKB_07817 [Bacillus anthracis str. Kruger
B]
gi|254759693|ref|ZP_05211717.1| hypothetical protein BantA9_15386 [Bacillus anthracis str.
Australia 94]
gi|386735375|ref|YP_006208556.1| GTPase, GTP1/OBG family [Bacillus anthracis str. H9401]
gi|421508328|ref|ZP_15955242.1| GTPase, GTP1/OBG family protein [Bacillus anthracis str. UR-1]
gi|421638679|ref|ZP_16079274.1| GTPase, GTP1/OBG family protein [Bacillus anthracis str. BF1]
gi|30255895|gb|AAP25530.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|49178423|gb|AAT53799.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|50082990|gb|AAT70130.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|167512841|gb|EDR88214.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167531456|gb|EDR94134.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170128498|gb|EDS97365.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669849|gb|EDT20590.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083665|gb|EDT68725.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190560199|gb|EDV14179.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|229267181|gb|ACQ48818.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|384385227|gb|AFH82888.1| GTPase, GTP1/OBG family [Bacillus anthracis str. H9401]
gi|401821578|gb|EJT20734.1| GTPase, GTP1/OBG family protein [Bacillus anthracis str. UR-1]
gi|403394206|gb|EJY91447.1| GTPase, GTP1/OBG family protein [Bacillus anthracis str. BF1]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|87306807|ref|ZP_01088953.1| probable GTP-binding protein [Blastopirellula marina DSM 3645]
gi|87290180|gb|EAQ82068.1| probable GTP-binding protein [Blastopirellula marina DSM 3645]
Length = 473
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 360 QIDEPFL-LVIVGEYNSGKSSVINALL-GKRYLKDGVVPTTNEITFLRFSDLASEEQQRC 417
Q EP + + +VG N GKS+ +N L +R + V TT + +RF
Sbjct: 172 QTGEPEMKIAVVGRRNVGKSTFVNTLARAERMIVSEVAGTTRDSVDIRFE---------- 221
Query: 418 ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLT 477
DG+ + +P L+ + V T+V R E + RAD+VL A + ++
Sbjct: 222 ---LDGKSFTAIDTPGLRRRVSV---KTDVDFYSTHR-AERSIRRADVVLMFFDASQQIS 274
Query: 478 ESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
+ + + Y + K VVFV+NK DLY + + +++ + N+ PV+
Sbjct: 275 KVDKQLIAYIAENYKPVVFVVNKWDLYHDKMPTDRWATYLHD------TFRNIPYAPVA 327
>gi|49480974|ref|YP_035785.1| GTP1/OBG family GTPase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|49332530|gb|AAT63176.1| possible GTPases, GTP1/OBG family [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
AD++ +++ + +E + F++ +Q K V V+N+ D
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQID 202
>gi|15605436|ref|NP_220222.1| GTP-binding protein EngA [Chlamydia trachomatis D/UW-3/CX]
gi|255311532|ref|ZP_05354102.1| GTP-binding protein EngA [Chlamydia trachomatis 6276]
gi|255317833|ref|ZP_05359079.1| GTP-binding protein EngA [Chlamydia trachomatis 6276s]
gi|255349095|ref|ZP_05381102.1| GTP-binding protein EngA [Chlamydia trachomatis 70]
gi|255503632|ref|ZP_05382022.1| GTP-binding protein EngA [Chlamydia trachomatis 70s]
gi|255507311|ref|ZP_05382950.1| GTP-binding protein EngA [Chlamydia trachomatis D(s)2923]
gi|339625449|ref|YP_004716928.1| ribosome-associated GTPase EngA [Chlamydia trachomatis L2c]
gi|385240242|ref|YP_005808084.1| GTP-binding protein EngA [Chlamydia trachomatis G/9768]
gi|385241168|ref|YP_005809009.1| GTP-binding protein EngA [Chlamydia trachomatis G/11222]
gi|385242093|ref|YP_005809933.1| GTP-binding protein EngA [Chlamydia trachomatis E/11023]
gi|385243020|ref|YP_005810859.1| GTP-binding protein EngA [Chlamydia trachomatis G/9301]
gi|385243911|ref|YP_005811757.1| GTP-binding protein [Chlamydia trachomatis D-EC]
gi|385244791|ref|YP_005812635.1| GTP-binding protein [Chlamydia trachomatis D-LC]
gi|385245703|ref|YP_005814526.1| GTP-binding protein EngA [Chlamydia trachomatis E/150]
gi|385246628|ref|YP_005815450.1| GTP-binding protein EngA [Chlamydia trachomatis G/11074]
gi|386263059|ref|YP_005816338.1| GTP-binding protein [Chlamydia trachomatis Sweden2]
gi|389858398|ref|YP_006360640.1| GTP-binding protein [Chlamydia trachomatis F/SW4]
gi|389859274|ref|YP_006361515.1| GTP-binding protein [Chlamydia trachomatis E/SW3]
gi|389860150|ref|YP_006362390.1| GTP-binding protein [Chlamydia trachomatis F/SW5]
gi|8134429|sp|O84709.1|DER_CHLTR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|3329158|gb|AAC68298.1| GTPase/GTP-binding protein [Chlamydia trachomatis D/UW-3/CX]
gi|289525747|emb|CBJ15228.1| GTP-binding protein [Chlamydia trachomatis Sweden2]
gi|296435319|gb|ADH17497.1| GTP-binding protein EngA [Chlamydia trachomatis E/150]
gi|296436247|gb|ADH18421.1| GTP-binding protein EngA [Chlamydia trachomatis G/9768]
gi|296437176|gb|ADH19346.1| GTP-binding protein EngA [Chlamydia trachomatis G/11222]
gi|296438107|gb|ADH20268.1| GTP-binding protein EngA [Chlamydia trachomatis G/11074]
gi|296439036|gb|ADH21189.1| GTP-binding protein EngA [Chlamydia trachomatis E/11023]
gi|297140608|gb|ADH97366.1| GTP-binding protein EngA [Chlamydia trachomatis G/9301]
gi|297748834|gb|ADI51380.1| GTP-binding protein [Chlamydia trachomatis D-EC]
gi|297749714|gb|ADI52392.1| GTP-binding protein [Chlamydia trachomatis D-LC]
gi|339460955|gb|AEJ77458.1| ribosome-associated GTPase EngA [Chlamydia trachomatis L2c]
gi|380249470|emb|CCE14766.1| GTP-binding protein [Chlamydia trachomatis F/SW5]
gi|380250345|emb|CCE13877.1| GTP-binding protein [Chlamydia trachomatis F/SW4]
gi|380251223|emb|CCE12988.1| GTP-binding protein [Chlamydia trachomatis E/SW3]
gi|440525631|emb|CCP50882.1| GTP-binding protein Der [Chlamydia trachomatis K/SotonK1]
gi|440527415|emb|CCP52899.1| GTP-binding protein Der [Chlamydia trachomatis D/SotonD1]
gi|440528307|emb|CCP53791.1| GTP-binding protein Der [Chlamydia trachomatis D/SotonD5]
gi|440529198|emb|CCP54682.1| GTP-binding protein Der [Chlamydia trachomatis D/SotonD6]
gi|440530088|emb|CCP55572.1| GTP-binding protein Der [Chlamydia trachomatis E/SotonE4]
gi|440530988|emb|CCP56472.1| GTP-binding protein Der [Chlamydia trachomatis E/SotonE8]
gi|440531879|emb|CCP57389.1| GTP-binding protein Der [Chlamydia trachomatis F/SotonF3]
gi|440532772|emb|CCP58282.1| GTP-binding protein Der [Chlamydia trachomatis G/SotonG1]
gi|440533666|emb|CCP59176.1| GTP-binding protein Der [Chlamydia trachomatis Ia/SotonIa1]
gi|440534560|emb|CCP60070.1| GTP-binding protein Der [Chlamydia trachomatis Ia/SotonIa3]
gi|440535455|emb|CCP60965.1| GTP-binding protein Der [Chlamydia trachomatis E/Bour]
Length = 490
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 38/169 (22%)
Query: 349 EEVSLLIDAVSQ------IDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEI 401
EE S L + V+Q +D P + ++G N GKSS+INALL +R + D TT
Sbjct: 205 EEASFLEELVAQTATPAPVDRPLKVALIGHPNVGKSSIINALLKEERCITDNSPGTTR-- 262
Query: 402 TFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPG-------TNVILQRQQR 454
D + Y + KE + +DT G N +
Sbjct: 263 --------------------DNIDVAYTHNN--KEYVFIDTAGLRKTKSIKNSVEWMSSS 300
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
TE+ + R D+ L VI A + L+ + L ++KK V ++NK DL
Sbjct: 301 RTEKAISRTDICLLVIDATQQLSYQDKRILSMIARYKKPHVILVNKWDL 349
>gi|428300833|ref|YP_007139139.1| small GTP-binding protein [Calothrix sp. PCC 6303]
gi|428237377|gb|AFZ03167.1| small GTP-binding protein [Calothrix sp. PCC 6303]
Length = 459
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLP 430
G + GKS+V+NAL G++ L+ G P + R S ++ E
Sbjct: 68 GLVSRGKSAVLNALCGQKTLQTG--PLNGVTQYPRSIRWHSSDKVEVE------------ 113
Query: 431 SPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
++DTPG + I + + ++ + +ADL+LFV+S D +T +E L+ ++
Sbjct: 114 --------LIDTPGLDEIAGEYRDKMARDVANQADLILFVVSGD--ITNTEYQALKDLRK 163
Query: 490 WKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPV 535
K ++ V NK DLY + + IS +N ++ L+ EN P+
Sbjct: 164 SHKPLILVFNKIDLYPDT----DRISI--QNNLQRLSAENTLDEPL 203
>gi|423067019|ref|ZP_17055809.1| small GTP-binding protein [Arthrospira platensis C1]
gi|406711305|gb|EKD06506.1| small GTP-binding protein [Arthrospira platensis C1]
Length = 468
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 15/139 (10%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG+ G T+ IT R ++ ++ Q +P G
Sbjct: 71 IAVFGMVGRGKSSILNALLGQTVFATG---PTHGIT--RTTE--AKPWQVEGENPTGAM- 122
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
S + ++ ++DTPG + V Q ++++ + +ADL+LFVI+ D +T+ E L
Sbjct: 123 ----SYRISQVELIDTPGIDEVDGQTREQMARQVAEKADLLLFVIAGD--ITQVEYQALS 176
Query: 486 YTQQWKKKVVFVLNKSDLY 504
+ + K ++ V NK D Y
Sbjct: 177 WLRDAGKPMLLVFNKIDQY 195
>gi|423654449|ref|ZP_17629748.1| hypothetical protein IKG_01437 [Bacillus cereus VD200]
gi|401295960|gb|EJS01583.1| hypothetical protein IKG_01437 [Bacillus cereus VD200]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESYVRNEFIKGLQ 338
>gi|423637679|ref|ZP_17613332.1| hypothetical protein IK7_04088 [Bacillus cereus VD156]
gi|401273622|gb|EJR79607.1| hypothetical protein IK7_04088 [Bacillus cereus VD156]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDVPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQCVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|166032899|ref|ZP_02235728.1| hypothetical protein DORFOR_02620 [Dorea formicigenerans ATCC
27755]
gi|166027256|gb|EDR46013.1| tRNA modification GTPase TrmE [Dorea formicigenerans ATCC 27755]
Length = 470
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 31/148 (20%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFSDLASEEQQRCER 419
I E VIVG+ N+GKSS++N LLG +R + + TT ++ E
Sbjct: 219 IKEGIKTVIVGKPNAGKSSLLNVLLGEERAIVTEIAGTTRDV---------------LEE 263
Query: 420 HPDGQYICYLPSPILKEMIIVDTPGT----NVILQRQQRLTEEFVPRADLVLFVISADRP 475
H + Q I + IVDT G +V+ + +E ADL+++VI A P
Sbjct: 264 HMNLQGIS---------LNIVDTAGIRDTEDVVEKIGVDRAKENAKDADLIMYVIDASAP 314
Query: 476 LTESEVVFLRYTQQWKKKVVFVLNKSDL 503
L E++ +R + +K + +LNK+DL
Sbjct: 315 LDENDDDIMRMI--YGRKAIILLNKADL 340
>gi|410671874|ref|YP_006924245.1| thiamine-phosphate pyrophosphorylase [Methanolobus psychrophilus
R15]
gi|409171002|gb|AFV24877.1| thiamine-phosphate pyrophosphorylase [Methanolobus psychrophilus
R15]
Length = 220
Score = 50.8 bits (120), Expect = 0.004, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 96 LAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIAERVDIAA 155
L+ L + AV IV + S K + + A L+K + + +A+FL+ +R+D+A
Sbjct: 24 LSKKGTLSDVSNAVEAGCRIVQYREKDRSTKEMVKEAFLIKEICEGKAIFLVNDRIDVAM 83
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADF--L 213
AV+A G+ + +P +AR + + ++G V L A A +GAD+ L
Sbjct: 84 AVDADGIHIGQDDMPIAIARQLLGND-------KIIGLTVHNLREALKA-EQDGADYVGL 135
Query: 214 VCCFGEGQKADVIEN-------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLED 266
F K D E + + IPI + + ++ GA V
Sbjct: 136 SPIFDTSTKKDAGEGIGPESIRGVKNALNIPIVAIGGINKQNCMSVVRGGADSLV----- 190
Query: 267 LSLFNDGVLSQMFCANGTTNEKTD 290
+S + C++ E TD
Sbjct: 191 -------AISAIVCSDDVNKETTD 207
>gi|423530476|ref|ZP_17506921.1| hypothetical protein IGE_04028 [Bacillus cereus HuB1-1]
gi|402446991|gb|EJV78849.1| hypothetical protein IGE_04028 [Bacillus cereus HuB1-1]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVREGMERETEHLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLTYEEELASPLLISE-IVEKKEELTETKHREASKESHVRNEFIKGLQ 338
>gi|434374609|ref|YP_006609253.1| hypothetical protein BTF1_05560 [Bacillus thuringiensis HD-789]
gi|401873166|gb|AFQ25333.1| hypothetical protein BTF1_05560 [Bacillus thuringiensis HD-789]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|229178077|ref|ZP_04305449.1| Reticulocyte binding protein [Bacillus cereus 172560W]
gi|423414645|ref|ZP_17391765.1| hypothetical protein IE1_03949 [Bacillus cereus BAG3O-2]
gi|423429573|ref|ZP_17406577.1| hypothetical protein IE7_01389 [Bacillus cereus BAG4O-1]
gi|228605565|gb|EEK63014.1| Reticulocyte binding protein [Bacillus cereus 172560W]
gi|401097565|gb|EJQ05587.1| hypothetical protein IE1_03949 [Bacillus cereus BAG3O-2]
gi|401121879|gb|EJQ29668.1| hypothetical protein IE7_01389 [Bacillus cereus BAG4O-1]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|218896601|ref|YP_002445012.1| hypothetical protein BCG9842_B3715 [Bacillus cereus G9842]
gi|218540615|gb|ACK93009.1| conserved hypothetical protein [Bacillus cereus G9842]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 132/299 (44%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPQNEIGSLETLITSIMKEKEQYVRDGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E + E +KD ++A ++ + NE I L+
Sbjct: 281 FSFILSENEKALLTYEEELASPLSISEIVEKKEELTEIKD-REASKESHVRNEFIKGLQ 338
>gi|76789443|ref|YP_328529.1| GTP-binding protein EngA [Chlamydia trachomatis A/HAR-13]
gi|237803133|ref|YP_002888327.1| GTP-binding protein EngA [Chlamydia trachomatis B/Jali20/OT]
gi|237805054|ref|YP_002889208.1| GTP-binding protein EngA [Chlamydia trachomatis B/TZ1A828/OT]
gi|376282713|ref|YP_005156539.1| GTP-binding protein [Chlamydia trachomatis A2497]
gi|385270430|ref|YP_005813590.1| GTP-binding protein [Chlamydia trachomatis A2497]
gi|123606653|sp|Q3KKZ1.1|DER_CHLTA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|76167973|gb|AAX50981.1| GTP-binding protein [Chlamydia trachomatis A/HAR-13]
gi|231273354|emb|CAX10269.1| GTP-binding protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274367|emb|CAX11162.1| GTP-binding protein [Chlamydia trachomatis B/Jali20/OT]
gi|347975570|gb|AEP35591.1| GTP-binding protein [Chlamydia trachomatis A2497]
gi|371908743|emb|CAX09375.1| GTP-binding protein [Chlamydia trachomatis A2497]
gi|438690641|emb|CCP49898.1| GTP-binding protein Der [Chlamydia trachomatis A/7249]
gi|438691726|emb|CCP49000.1| GTP-binding protein Der [Chlamydia trachomatis A/5291]
gi|438693099|emb|CCP48101.1| GTP-binding protein Der [Chlamydia trachomatis A/363]
Length = 490
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 38/169 (22%)
Query: 349 EEVSLLIDAVSQ------IDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEI 401
EE S L + V+Q +D P + ++G N GKSS+INALL +R + D TT
Sbjct: 205 EEASFLEELVAQTATPAPVDRPLKVALIGHPNVGKSSIINALLKEERCITDNSPGTTR-- 262
Query: 402 TFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPG-------TNVILQRQQR 454
D + Y + KE + +DT G N +
Sbjct: 263 --------------------DNIDVAYTHNN--KEYVFIDTAGLRKTKSIKNSVEWMSSS 300
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
TE+ + R D+ L VI A + L+ + L ++KK V ++NK DL
Sbjct: 301 RTEKAISRTDICLLVIDATQQLSYQDKRILSMIARYKKPHVILVNKWDL 349
>gi|423383064|ref|ZP_17360320.1| hypothetical protein ICE_00810 [Bacillus cereus BAG1X1-2]
gi|401643924|gb|EJS61618.1| hypothetical protein ICE_00810 [Bacillus cereus BAG1X1-2]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVREGMERETEHLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLTYEEELASPLLISE-IVEKKEELTETKHREASKESHVRNEFIKGLQ 338
>gi|414584362|ref|ZP_11441502.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-1215]
gi|420881521|ref|ZP_15344888.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0304]
gi|420886062|ref|ZP_15349422.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0421]
gi|420891190|ref|ZP_15354537.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0422]
gi|420897125|ref|ZP_15360464.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0708]
gi|420901022|ref|ZP_15364353.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0817]
gi|420905940|ref|ZP_15369258.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-1212]
gi|420974617|ref|ZP_15437808.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0921]
gi|392078450|gb|EIU04277.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0422]
gi|392081825|gb|EIU07651.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0421]
gi|392086430|gb|EIU12255.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0304]
gi|392096437|gb|EIU22232.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0708]
gi|392098383|gb|EIU24177.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0817]
gi|392103844|gb|EIU29630.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-1212]
gi|392119514|gb|EIU45282.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-1215]
gi|392162500|gb|EIU88190.1| isoniazid inducible protein IniC [Mycobacterium abscessus 5S-0921]
Length = 497
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGK--------------RYLKDGVVPTTNEITF- 403
+++DEP + I G N+GKS+++NAL+G+ + + G P F
Sbjct: 39 ARLDEPIRVAIAGTLNAGKSTLVNALVGEDIAPTDATEATRIVAWFRHGAAPRVTANLFS 98
Query: 404 -------LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNV----ILQRQ 452
+R S E R + P+P L E+ ++DTPGT+ + +R
Sbjct: 99 GVRQDIPIRREGGLSFELDRLDPASVADLDVNWPAPELNEITLIDTPGTSSLSTDVSERS 158
Query: 453 QRLT--EEFVPRADLVLFVISADRPLTESEVVFL 484
L E+ VPR D V+F++ R L +++ L
Sbjct: 159 LALLVPEDGVPRVDAVIFLL---RSLNAADIGLL 189
>gi|415885243|ref|ZP_11547171.1| putative GTPase [Bacillus methanolicus MGA3]
gi|387590912|gb|EIJ83231.1| putative GTPase [Bacillus methanolicus MGA3]
Length = 1221
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 427 CYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL- 484
++ P+ + I +VDTPG + I R + ++ +D +LFV + ++++ FL
Sbjct: 788 VFIDCPLTRAGITLVDTPGADSINARHTGVAFNYIKNSDAILFVTYYNHAFSKADREFLI 847
Query: 485 ---RYTQQWK-KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
R + ++ K+ F++N DL N E+ + +V++ ++ I ++PVS+
Sbjct: 848 QLGRVKETFELDKMFFIVNAIDLASNEEEMASVMEYVQDQLLQ-YGIRQPNLFPVSSLLA 906
Query: 541 LEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDG 583
L+ K + +L +S RIN F EK YSF+ G
Sbjct: 907 LKEK----------NDQLETEES--RINDF---EKAFYSFISG 934
>gi|229109125|ref|ZP_04238725.1| Reticulocyte binding protein [Bacillus cereus Rock1-15]
gi|228674403|gb|EEL29647.1| Reticulocyte binding protein [Bacillus cereus Rock1-15]
Length = 1210
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 272 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 329
>gi|229115118|ref|ZP_04244528.1| Reticulocyte binding protein [Bacillus cereus Rock1-3]
gi|423380525|ref|ZP_17357809.1| hypothetical protein IC9_03878 [Bacillus cereus BAG1O-2]
gi|228668258|gb|EEL23690.1| Reticulocyte binding protein [Bacillus cereus Rock1-3]
gi|401631277|gb|EJS49074.1| hypothetical protein IC9_03878 [Bacillus cereus BAG1O-2]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------------- 405
E ++ G +++GKS+++N L + L +PT+ + +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGLDRVVVTVKSGEQYE 101
Query: 406 ----FSDLASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
+S A E +Q C+ + G +I +PI + +++VDTPG + Q TE
Sbjct: 102 YDGAYS--AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATEST 159
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVK 518
+ AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK
Sbjct: 160 LHLADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVK 219
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL- 577
+ + +IE +Y S R + S S + + + R + E L+
Sbjct: 220 Q-SFSNWDIEVDGVYYTSLRMMNHQHNEIGSLETLITSIMKEKEQYVREGMERETEYLMG 278
Query: 578 --YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSL 635
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L
Sbjct: 279 EHFSFIVSENEKALLTYEEELASPLSISE-IVEKKEELTETKHREASKESHVRNEFIKGL 337
Query: 636 K 636
+
Sbjct: 338 Q 338
>gi|229183865|ref|ZP_04311082.1| Reticulocyte binding protein [Bacillus cereus BGSC 6E1]
gi|228599714|gb|EEK57317.1| Reticulocyte binding protein [Bacillus cereus BGSC 6E1]
Length = 1210
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 212 SFSNWDIEVDGVYYTSLR 229
>gi|448626434|ref|ZP_21671213.1| thiamine-phosphate pyrophosphorylase [Haloarcula vallismortis ATCC
29715]
gi|445760046|gb|EMA11310.1| thiamine-phosphate pyrophosphorylase [Haloarcula vallismortis ATCC
29715]
Length = 211
Score = 50.8 bits (120), Expect = 0.004, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG +++ +A+ +G+V L + + + Y+ L+ + ++ + F++ +RVDIA
Sbjct: 16 AGRTTDEIVADAIDGGIGVVQLREKDQTARERYKLGQELRELTREAGVTFVVNDRVDIAQ 75
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLV- 214
A++A GV L D LP VAR + D L+GR+V T++ A A+++ V
Sbjct: 76 ALDADGVHLGDDDLPVPVARELLGDD-------ALIGRSVSTVEDAEAAAAAGADYLGVG 128
Query: 215 CCFGEGQKADVIEN----------SLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
F G K D+ ++ ++ V IP + + ++ + +GA G +
Sbjct: 129 AVFATGSKDDIDDDEYAVGTDRVAAIAEAVDIPFVGIGGITAQNATEVISAGADGVAV 186
>gi|52143780|ref|YP_083048.1| GTP1/OBG family GTPase [Bacillus cereus E33L]
gi|51977249|gb|AAU18799.1| possible GTPases, GTP1/OBG family [Bacillus cereus E33L]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|33865040|ref|NP_896599.1| GTPase [Synechococcus sp. WH 8102]
gi|33638724|emb|CAE07019.1| possible GTPase [Synechococcus sp. WH 8102]
Length = 431
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 34/238 (14%)
Query: 321 DREKQLIETERSVLLEAIDVIKKASPLME-EVSLLIDAVSQIDEPFL-LVIVGEYNSGKS 378
+R +QL++ R + + + ++ L+ E++LL + +++ L L + G GKS
Sbjct: 13 ERCRQLLQRWR----QDLRLTRREQGLLRGELTLLDRQLQRLEHKVLRLAVFGRVGVGKS 68
Query: 379 SVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPI--LKE 436
S+INAL+G+R L+ +D+A +R Q P + L+
Sbjct: 69 SLINALVGQRLLE---------------TDVAHGSTRR-------QQAVTWPLKLDGLQR 106
Query: 437 MIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVV 495
+ ++DTPG + I + RL DLVL VI +D LT + L Q K V
Sbjct: 107 VELIDTPGIDEIDAAGRTRLATRVAMGVDLVLLVIDSD--LTRCDRDALETLQASGKPVR 164
Query: 496 FVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGK 553
VLN+SD + +L E + ++ L + V P R + ++ S+A +
Sbjct: 165 LVLNRSDRWPEE-QLPELLDSIRSRLPSDLPLTAVAAAPRQPRLDADGRVRSSAAPAR 221
>gi|423564033|ref|ZP_17540309.1| hypothetical protein II5_03437 [Bacillus cereus MSX-A1]
gi|401197800|gb|EJR04726.1| hypothetical protein II5_03437 [Bacillus cereus MSX-A1]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPQNEIGSLETLITSIMKEKEQYVRDGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFILSENEKALLTYEEELASPLSISE-IVEKKEELTEIKHREASKESHVRNEFIKGLQ 338
>gi|423446192|ref|ZP_17423071.1| hypothetical protein IEC_00800 [Bacillus cereus BAG5O-1]
gi|423538711|ref|ZP_17515102.1| hypothetical protein IGK_00803 [Bacillus cereus HuB4-10]
gi|401132272|gb|EJQ39914.1| hypothetical protein IEC_00800 [Bacillus cereus BAG5O-1]
gi|401177295|gb|EJQ84487.1| hypothetical protein IGK_00803 [Bacillus cereus HuB4-10]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------------- 405
E ++ G +++GKS+++N L + L +PT+ + +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGLDRVVVTVKSGEQYE 101
Query: 406 ----FSDLASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
+S A E +Q C+ + G +I +PI + +++VDTPG + Q TE
Sbjct: 102 YDGAYS--AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATEST 159
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVK 518
+ AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK
Sbjct: 160 LHLADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVK 219
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL- 577
+ + +IE +Y S R + S S + + + R + E L+
Sbjct: 220 Q-SFSNWDIEVDGVYYTSLRMMNHQHNEIGSLETLITSIMKEKEQYVREGMERETEYLMG 278
Query: 578 --YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSL 635
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L
Sbjct: 279 EHFSFIVSENEKALLTYEEELASPLSISE-IVEKKEELTETKHREASKESHVRNEFIKGL 337
Query: 636 K 636
+
Sbjct: 338 Q 338
>gi|419606736|ref|ZP_14141092.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 9860]
gi|380586604|gb|EIB07891.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 9860]
Length = 442
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL 334
>gi|333983970|ref|YP_004513180.1| hypothetical protein [Methylomonas methanica MC09]
gi|333808011|gb|AEG00681.1| hypothetical protein Metme_2277 [Methylomonas methanica MC09]
Length = 524
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGV-VPTTNEITFLRFSDLASEEQQRCERHP- 421
P ++ +G GKSS++N L G+ K G+ PT+ E+T L + QQ P
Sbjct: 54 PLIVAFIGGTGVGKSSLLNRLAGQAVAKAGIERPTSREVTLYHHRSL--QLQQLPANLPL 111
Query: 422 DGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
D + +P ++ +D P + I + L E++P D++L+V+S +R +++
Sbjct: 112 DKTKLALHDNPQNSHIVWIDMPDFDSIELANKTLVLEWLPHIDVLLYVVSPER-YRDNKA 170
Query: 482 VFLRYTQQWKKKVVFVLNKSD 502
L + K +FV+N+ D
Sbjct: 171 WQLLKAEGGKHAWLFVMNQWD 191
>gi|196046659|ref|ZP_03113883.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225863534|ref|YP_002748912.1| hypothetical protein BCA_1632 [Bacillus cereus 03BB102]
gi|196022592|gb|EDX61275.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225788920|gb|ACO29137.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 1219
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSTHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|352080035|ref|ZP_08951104.1| GTP-binding protein HSR1-related protein [Rhodanobacter sp. 2APBS1]
gi|351684744|gb|EHA67813.1| GTP-binding protein HSR1-related protein [Rhodanobacter sp. 2APBS1]
Length = 452
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 28/173 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G ++GKS++ NALLG+ GV+ T D E DG
Sbjct: 76 VAVFGRVSTGKSALGNALLGRDAFTVGVLHGTTTDADHAVLD---------EAQHDG--- 123
Query: 427 CYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
++++DTPG N + + +++L + +DLV+FV D LT E+ L+
Sbjct: 124 ----------LVLIDTPGINELDGEAREKLAFDVAEVSDLVVFVGDGD--LTREELDALK 171
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSAR 538
++ ++ LNK+D Y A EL + ++ +++ L+ E+V V+AR
Sbjct: 172 TLAATQRPLLLALNKADRY-GADELADLLAHLRQRVAGLVRAEDV--LAVAAR 221
>gi|331085445|ref|ZP_08334530.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407683|gb|EGG87181.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 217
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 102 LDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNAS 160
L ++EA V +V L EA GK E A L+K + + +I +RVD+A A +A+
Sbjct: 26 LRTVEEACKGGVTLVQLREKEAGGKEYLEKAILVKKITDRYGVPLIIDDRVDVAIACDAA 85
Query: 161 GVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
GV + LP VAR + ++G +T++AA A EGAD+L
Sbjct: 86 GVHVGASDLPVAVARKLLGPE-------KIIGATAKTVEAAKKA-WEEGADYL 130
>gi|229096163|ref|ZP_04227136.1| Reticulocyte binding protein [Bacillus cereus Rock3-29]
gi|423443556|ref|ZP_17420462.1| hypothetical protein IEA_03886 [Bacillus cereus BAG4X2-1]
gi|423536044|ref|ZP_17512462.1| hypothetical protein IGI_03876 [Bacillus cereus HuB2-9]
gi|228687123|gb|EEL41028.1| Reticulocyte binding protein [Bacillus cereus Rock3-29]
gi|402412642|gb|EJV44995.1| hypothetical protein IEA_03886 [Bacillus cereus BAG4X2-1]
gi|402461469|gb|EJV93182.1| hypothetical protein IGI_03876 [Bacillus cereus HuB2-9]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------------- 405
E ++ G +++GKS+++N L + L +PT+ + +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGLDRVVVTVKSGEQYE 101
Query: 406 ----FSDLASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
+S A E +Q C+ + G +I +PI + +++VDTPG + Q TE
Sbjct: 102 YDGAYS--AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATEST 159
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVK 518
+ AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK
Sbjct: 160 LHLADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVK 219
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL- 577
+ + +IE +Y S R + S S + + + R + E L+
Sbjct: 220 Q-SFSNWDIEVDGVYYTSLRMMNHQHNEIGSLETLITSIMKEKEQYVREGMERETEYLMG 278
Query: 578 --YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSL 635
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L
Sbjct: 279 EHFSFIVSENEKALLTYEEELASPLSISE-IVEKKEELTETKHREASKESHVRNEFIKGL 337
Query: 636 K 636
+
Sbjct: 338 Q 338
>gi|169631360|ref|YP_001705009.1| isoniazid inductible gene protein IniC [Mycobacterium abscessus
ATCC 19977]
gi|419712381|ref|ZP_14239841.1| isoniazid inducible protein IniC [Mycobacterium abscessus M93]
gi|419713134|ref|ZP_14240563.1| isoniazid inducible gene protein IniC [Mycobacterium abscessus M94]
gi|420865825|ref|ZP_15329214.1| isoniazid inducible protein IniC [Mycobacterium abscessus 4S-0303]
gi|420870620|ref|ZP_15334002.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0726-RA]
gi|420875063|ref|ZP_15338439.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0726-RB]
gi|420911933|ref|ZP_15375245.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0125-R]
gi|420918392|ref|ZP_15381695.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0125-S]
gi|420923555|ref|ZP_15386851.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0728-S]
gi|420929216|ref|ZP_15392495.1| isoniazid inducible protein IniC [Mycobacterium abscessus 6G-1108]
gi|420968906|ref|ZP_15432109.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0810-R]
gi|420979554|ref|ZP_15442731.1| isoniazid inducible protein IniC [Mycobacterium abscessus 6G-0212]
gi|420984939|ref|ZP_15448106.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0728-R]
gi|420988793|ref|ZP_15451949.1| isoniazid inducible protein IniC [Mycobacterium abscessus 4S-0206]
gi|421009474|ref|ZP_15472583.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0119-R]
gi|421015111|ref|ZP_15478186.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0122-R]
gi|421020208|ref|ZP_15483264.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0122-S]
gi|421026077|ref|ZP_15489120.1| isoniazid inducible protein IniC [Mycobacterium abscessus 3A-0731]
gi|421031356|ref|ZP_15494386.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0930-R]
gi|421036504|ref|ZP_15499521.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0930-S]
gi|421040412|ref|ZP_15503420.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0116-R]
gi|421045418|ref|ZP_15508418.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0116-S]
gi|169243327|emb|CAM64355.1| Isoniazid inductible gene protein IniC [Mycobacterium abscessus]
gi|382937636|gb|EIC61981.1| isoniazid inducible protein IniC [Mycobacterium abscessus M93]
gi|382947187|gb|EIC71468.1| isoniazid inducible gene protein IniC [Mycobacterium abscessus M94]
gi|392064541|gb|EIT90390.1| isoniazid inducible protein IniC [Mycobacterium abscessus 4S-0303]
gi|392066538|gb|EIT92386.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0726-RB]
gi|392070090|gb|EIT95937.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0726-RA]
gi|392111283|gb|EIU37053.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0125-S]
gi|392113927|gb|EIU39696.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0125-R]
gi|392126204|gb|EIU51955.1| isoniazid inducible protein IniC [Mycobacterium abscessus 6G-1108]
gi|392128208|gb|EIU53958.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0728-S]
gi|392163832|gb|EIU89521.1| isoniazid inducible protein IniC [Mycobacterium abscessus 6G-0212]
gi|392169935|gb|EIU95613.1| isoniazid inducible protein IniC [Mycobacterium abscessus
6G-0728-R]
gi|392183072|gb|EIV08723.1| isoniazid inducible protein IniC [Mycobacterium abscessus 4S-0206]
gi|392195080|gb|EIV20699.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0119-R]
gi|392198183|gb|EIV23797.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0122-R]
gi|392205931|gb|EIV31514.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0122-S]
gi|392209600|gb|EIV35172.1| isoniazid inducible protein IniC [Mycobacterium abscessus 3A-0731]
gi|392219238|gb|EIV44763.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0930-R]
gi|392220356|gb|EIV45880.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0930-S]
gi|392221340|gb|EIV46863.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0116-R]
gi|392234871|gb|EIV60369.1| isoniazid inducible protein IniC [Mycobacterium abscessus
4S-0116-S]
gi|392244562|gb|EIV70040.1| isoniazid inducible protein IniC [Mycobacterium abscessus
3A-0810-R]
Length = 497
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 359 SQIDEPFLLVIVGEYNSGKSSVINALLGK--------------RYLKDGVVPTTNEITF- 403
+++DEP + I G N+GKS+++NAL+G+ + + G P F
Sbjct: 39 ARLDEPIRVAIAGTLNAGKSTLVNALVGEDIAPTDATEATRIVAWFRHGAAPRVTANLFS 98
Query: 404 -------LRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNV----ILQRQ 452
+R S E R + P+P L E+ ++DTPGT+ + +R
Sbjct: 99 GVRQDIPIRREGGLSFELDRLDPASVADLDVNWPAPELNEITLIDTPGTSSLSTDVSERS 158
Query: 453 QRLT--EEFVPRADLVLFVISADRPLTESEVVFL 484
L E+ VPR D V+F++ R L +++ L
Sbjct: 159 LALLVPEDGVPRVDAVIFLL---RSLNAADIGLL 189
>gi|28211401|ref|NP_782345.1| thiamin-phosphate pyrophosphorylase [Clostridium tetani E88]
gi|28203842|gb|AAO36282.1| thiamin-phosphate pyrophosphorylase [Clostridium tetani E88]
Length = 222
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 95 VLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDI 153
+L G D +++EA+ +V L S K YE A +K + + +I +RVDI
Sbjct: 31 ILKGRDLKKVLEEAILGGTTLVQLREKNVSSKEFYEIAKDIKVITDKYNIPLIINDRVDI 90
Query: 154 AAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
A AVNA G+ + + LPA + R + + ++G + T++ A A +GAD+L
Sbjct: 91 ALAVNAEGIHIGQKDLPANIVRKIIGED-------KILGVSANTIEDALKA-QRDGADYL 142
Query: 214 --VCCFGEGQKADVIENSLFT------NVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
F K D S+ T V IPI + +V K ++ G +
Sbjct: 143 GVGAIFPTNSKKDAESTSIETLKEIKNAVNIPIVAIGGINENNVQKLKETNIDGIAV 199
>gi|86150742|ref|ZP_01068958.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124454|ref|YP_004066458.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|419645144|ref|ZP_14176705.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 9081]
gi|419655022|ref|ZP_14185886.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-988]
gi|419683509|ref|ZP_14212203.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1213]
gi|419698325|ref|ZP_14226040.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23211]
gi|85841912|gb|EAQ59158.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018176|gb|ADT66269.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|380620859|gb|EIB39710.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 9081]
gi|380637741|gb|EIB55352.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-988]
gi|380658513|gb|EIB74524.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1213]
gi|380675321|gb|EIB90229.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23211]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|423643287|ref|ZP_17618905.1| hypothetical protein IK9_03232 [Bacillus cereus VD166]
gi|401275291|gb|EJR81258.1| hypothetical protein IK9_03232 [Bacillus cereus VD166]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESYVRNEFIKGLQ 338
>gi|402561339|ref|YP_006604063.1| hypothetical protein BTG_12880 [Bacillus thuringiensis HD-771]
gi|423361629|ref|ZP_17339131.1| hypothetical protein IC1_03608 [Bacillus cereus VD022]
gi|401079440|gb|EJP87738.1| hypothetical protein IC1_03608 [Bacillus cereus VD022]
gi|401789991|gb|AFQ16030.1| hypothetical protein BTG_12880 [Bacillus thuringiensis HD-771]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPQNEIGSLETLITSIMKEKEQYVRDGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFILSENEKALLTYEEELASPLSISE-IVEKKEELTEIKHREASKESHVRNEFIKGLQ 338
>gi|427720565|ref|YP_007068559.1| dynamin family protein [Calothrix sp. PCC 7507]
gi|427353001|gb|AFY35725.1| Dynamin family protein [Calothrix sp. PCC 7507]
Length = 680
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 48/296 (16%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVP---TTNEITF-------LRFSDLAS 411
++ F + +VGE+ GKS+ INALLG+ L + P T N +T+ + F D
Sbjct: 56 NKTFWVAVVGEFKRGKSTFINALLGQEILPSDIEPCSATLNRVTYSLNSYVEVEFKD-GR 114
Query: 412 EEQQRCER--------HPDG--------QYICYLPSPILKEMI-IVDTPGTNVILQRQQR 454
+E+ E+ P+ + + Y P+ K + I+DTPG N
Sbjct: 115 KEKVEIEKLSEYVTKLTPESEATAANVKEAVVYYPANYCKNNVDIIDTPGLNDD-PSMTG 173
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFL--RYTQQWKKKVVFVLNKSDLYQNAFELEE 512
+T +P+ D + VI A P++E E FL + +V+FV+ D + E+
Sbjct: 174 VTLSVLPKVDAAILVIMAQSPVSEVERDFLENKLLTNDLGRVIFVVTGIDRCNRPGDAEK 233
Query: 513 AIS--------FVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSH 564
++ +V E + E+ Y V + + K+ SA ++ + +D
Sbjct: 234 VVAGVQRRIEEYVLERAAQQWG-EDSAEYEVYRKKIGKPKVFGLSAYQALEAKNNHDDEL 292
Query: 565 WRINTFDKLEKLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQD 620
+ F + EK L FL KER ++L+ P+ A + SS E L + Q+
Sbjct: 293 LAKSRFVEFEKALEEFL------VKERGAIELQVPLNRA--IASSGEILSTINIQE 340
>gi|423647596|ref|ZP_17623166.1| hypothetical protein IKA_01383 [Bacillus cereus VD169]
gi|401285550|gb|EJR91389.1| hypothetical protein IKA_01383 [Bacillus cereus VD169]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|423625345|ref|ZP_17601123.1| hypothetical protein IK3_03943 [Bacillus cereus VD148]
gi|401255025|gb|EJR61250.1| hypothetical protein IK3_03943 [Bacillus cereus VD148]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 130/301 (43%), Gaps = 31/301 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------------- 405
E ++ G +++GKS+++N L + L +PT+ + +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGLDRVVVTVKSGEQYE 101
Query: 406 ----FSDLASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
+S A E +Q C+ + G +I +PI + +++VDTPG + Q TE
Sbjct: 102 YDGAYS--AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATEST 159
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVK 518
+ AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK
Sbjct: 160 LHLADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVK 219
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL- 577
+ + +IE +Y S R + S S + + + R + E L+
Sbjct: 220 Q-SFSNWDIEVDGVYYTSLRMMNHQHNEIGSLETLITSIMKEKEQYVREGMERETEYLMG 278
Query: 578 --YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSL 635
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L
Sbjct: 279 EHFSFIVSENEKALLTYEEELASPLSISE-IVEKKEELTETKHREASKESHVRNEFIKGL 337
Query: 636 K 636
+
Sbjct: 338 Q 338
>gi|166154045|ref|YP_001654163.1| GTP-binding protein EngA [Chlamydia trachomatis 434/Bu]
gi|166154920|ref|YP_001653175.1| GTP-binding protein Der [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335246|ref|ZP_07223490.1| GTP-binding protein EngA [Chlamydia trachomatis L2tet1]
gi|238687413|sp|B0BAF8.1|DER_CHLTB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238687426|sp|B0B8S9.1|DER_CHLT2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|165930033|emb|CAP03516.1| GTP-binding protein [Chlamydia trachomatis 434/Bu]
gi|165930908|emb|CAP06470.1| GTP-binding protein [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|440526518|emb|CCP52002.1| GTP-binding protein Der [Chlamydia trachomatis L2b/8200/07]
gi|440536342|emb|CCP61855.1| GTP-binding protein Der [Chlamydia trachomatis L2b/795]
gi|440537236|emb|CCP62750.1| GTP-binding protein Der [Chlamydia trachomatis L1/440/LN]
gi|440538125|emb|CCP63639.1| GTP-binding protein Der [Chlamydia trachomatis L1/1322/p2]
gi|440539015|emb|CCP64529.1| GTP-binding protein Der [Chlamydia trachomatis L1/115]
gi|440539904|emb|CCP65418.1| GTP-binding protein Der [Chlamydia trachomatis L1/224]
gi|440540795|emb|CCP66309.1| GTP-binding protein Der [Chlamydia trachomatis L2/25667R]
gi|440541683|emb|CCP67197.1| GTP-binding protein Der [Chlamydia trachomatis L3/404/LN]
gi|440542571|emb|CCP68085.1| GTP-binding protein Der [Chlamydia trachomatis L2b/UCH-2]
gi|440543462|emb|CCP68976.1| GTP-binding protein Der [Chlamydia trachomatis L2b/Canada2]
gi|440544353|emb|CCP69867.1| GTP-binding protein Der [Chlamydia trachomatis L2b/LST]
gi|440545243|emb|CCP70757.1| GTP-binding protein Der [Chlamydia trachomatis L2b/Ams1]
gi|440546133|emb|CCP71647.1| GTP-binding protein Der [Chlamydia trachomatis L2b/CV204]
gi|440914395|emb|CCP90812.1| GTP-binding protein Der [Chlamydia trachomatis L2b/Ams2]
gi|440915285|emb|CCP91702.1| GTP-binding protein Der [Chlamydia trachomatis L2b/Ams3]
gi|440916177|emb|CCP92594.1| GTP-binding protein Der [Chlamydia trachomatis L2b/Canada1]
gi|440917070|emb|CCP93487.1| GTP-binding protein Der [Chlamydia trachomatis L2b/Ams4]
gi|440917961|emb|CCP94378.1| GTP-binding protein Der [Chlamydia trachomatis L2b/Ams5]
Length = 490
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 38/169 (22%)
Query: 349 EEVSLLIDAVSQ------IDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEI 401
EE S L + V+Q +D P + ++G N GKSS+INALL +R + D TT
Sbjct: 205 EEASFLEELVAQTATPAPVDRPLKVALIGHPNVGKSSIINALLKEERCITDNSPGTTR-- 262
Query: 402 TFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPG-------TNVILQRQQR 454
D + Y + KE + +DT G N +
Sbjct: 263 --------------------DNIDVAYTHNN--KEYVFIDTAGLRKTKSIKNSVEWMSSS 300
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
TE+ + R D+ L VI A + L+ + L ++KK V ++NK DL
Sbjct: 301 RTEKAISRTDICLLVIDATQQLSYQDKRILSMIARYKKPHVILVNKWDL 349
>gi|346309529|ref|ZP_08851614.1| tRNA modification GTPase TrmE [Dorea formicigenerans 4_6_53AFAA]
gi|345898734|gb|EGX68596.1| tRNA modification GTPase TrmE [Dorea formicigenerans 4_6_53AFAA]
Length = 470
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 31/148 (20%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFSDLASEEQQRCER 419
I E VIVG+ N+GKSS++N LLG +R + + TT ++ E
Sbjct: 219 IKEGIKTVIVGKPNAGKSSLLNVLLGEERAIVTEIAGTTRDV---------------LEE 263
Query: 420 HPDGQYICYLPSPILKEMIIVDTPGT----NVILQRQQRLTEEFVPRADLVLFVISADRP 475
H + Q I + IVDT G +V+ + +E ADL+++VI A P
Sbjct: 264 HMNLQGIS---------LNIVDTAGIRDTEDVVEKIGVDRAKENAKDADLIMYVIDASAP 314
Query: 476 LTESEVVFLRYTQQWKKKVVFVLNKSDL 503
L E++ +R + +K + +LNK+DL
Sbjct: 315 LDENDDDIMRMI--YGRKAIILLNKADL 340
>gi|228957945|ref|ZP_04119684.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|423629471|ref|ZP_17605219.1| hypothetical protein IK5_02322 [Bacillus cereus VD154]
gi|228801739|gb|EEM48617.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401267338|gb|EJR73398.1| hypothetical protein IK5_02322 [Bacillus cereus VD154]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 129/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++ ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREVSKESYVRNEFIKGLQ 338
>gi|205356679|ref|ZP_03223440.1| putative thiophene and furan oxidation protein [Campylobacter
jejuni subsp. jejuni CG8421]
gi|419620293|ref|ZP_14153736.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
51494]
gi|419633728|ref|ZP_14166155.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23269]
gi|419646148|ref|ZP_14177623.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
53161]
gi|419659630|ref|ZP_14190153.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-979]
gi|419670970|ref|ZP_14200649.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-14]
gi|419672773|ref|ZP_14202260.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
51037]
gi|419678284|ref|ZP_14207345.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
87459]
gi|205345417|gb|EDZ32059.1| putative thiophene and furan oxidation protein [Campylobacter
jejuni subsp. jejuni CG8421]
gi|380600730|gb|EIB21057.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
51494]
gi|380611252|gb|EIB30808.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23269]
gi|380624147|gb|EIB42812.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
53161]
gi|380639001|gb|EIB56517.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-979]
gi|380649976|gb|EIB66641.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-14]
gi|380655037|gb|EIB71370.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
51037]
gi|380661068|gb|EIB76989.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
87459]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|206970783|ref|ZP_03231735.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206734419|gb|EDZ51589.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|423610098|ref|ZP_17585959.1| hypothetical protein IIM_00813 [Bacillus cereus VD107]
gi|401249415|gb|EJR55721.1| hypothetical protein IIM_00813 [Bacillus cereus VD107]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 400 EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEE 458
++T FSD + E++ C + + Y C L + + +VDTPG + I R + +
Sbjct: 747 QVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTPGADSINARHTDVAFQ 803
Query: 459 FVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEA 513
++ AD +LFV + + ++ FL + K K+ F++N +DL Q+ ELE
Sbjct: 804 YIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLINAADLAQSEEELEMV 863
Query: 514 ISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++ + ++ I N ++ +S+ LE K
Sbjct: 864 KGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + R SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIERGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQS 221
>gi|419539366|ref|ZP_14078699.1| tRNA modification GTPase TrmE [Campylobacter coli 90-3]
gi|419540815|ref|ZP_14080046.1| tRNA modification GTPase TrmE [Campylobacter coli Z163]
gi|419614763|ref|ZP_14148534.1| tRNA modification GTPase TrmE [Campylobacter coli H56]
gi|419616673|ref|ZP_14150316.1| tRNA modification GTPase TrmE [Campylobacter coli Z156]
gi|380515205|gb|EIA41383.1| tRNA modification GTPase TrmE [Campylobacter coli 90-3]
gi|380515961|gb|EIA42105.1| tRNA modification GTPase TrmE [Campylobacter coli Z163]
gi|380592329|gb|EIB13235.1| tRNA modification GTPase TrmE [Campylobacter coli H56]
gi|380595254|gb|EIB16000.1| tRNA modification GTPase TrmE [Campylobacter coli Z156]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILTIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL 334
>gi|228907305|ref|ZP_04071164.1| Reticulocyte binding protein [Bacillus thuringiensis IBL 200]
gi|228852359|gb|EEM97154.1| Reticulocyte binding protein [Bacillus thuringiensis IBL 200]
Length = 1210
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVREGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 272 FSFILSENEKALLTYEEELASPLSISE-IVEKKEELTETKHREASKESHVRNEFIKGLQ 329
>gi|427725011|ref|YP_007072288.1| thiamine-phosphate diphosphorylase [Leptolyngbya sp. PCC 7376]
gi|427356731|gb|AFY39454.1| thiamine-phosphate diphosphorylase [Leptolyngbya sp. PCC 7376]
Length = 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 92 PHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDR--ALFLIAE 149
PH+ L G +++EA+ V IV + + Y A +K + DR ALFL+ +
Sbjct: 155 PHENLLG-----VVEEALQGGVHIVQYRDKHKNDEERYANALAMKKLC-DRYGALFLVND 208
Query: 150 RVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGR---NVQTLDAAFNASS 206
RVDIAAAV+A GV L LP AR + +VGR N + +D A
Sbjct: 209 RVDIAAAVDADGVHLGQTDLPIATAREILGAG-------KIVGRSTTNPEEMDKAL---- 257
Query: 207 SEGADFL 213
EGAD++
Sbjct: 258 KEGADYV 264
>gi|365092324|ref|ZP_09329472.1| hypothetical protein KYG_11989 [Acidovorax sp. NO-1]
gi|363415448|gb|EHL22575.1| hypothetical protein KYG_11989 [Acidovorax sp. NO-1]
Length = 653
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+F++SAD +T S++
Sbjct: 196 LINIPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFILSADTGVTRSDLSIW 254
Query: 485 R----YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE----NTMKLLNIENVTIYPVS 536
R + + VLNK D + E + E + ++L + + PVS
Sbjct: 255 REHLAISADSMDARLVVLNKIDTLWDTLNSAEQVHAQMERQCSTSAEMLGVPLERVVPVS 314
Query: 537 ARSTLEAKLS 546
A+ L AK++
Sbjct: 315 AQKGLVAKIT 324
>gi|57167879|ref|ZP_00367019.1| tRNA modification GTPase TrmE [Campylobacter coli RM2228]
gi|305432095|ref|ZP_07401262.1| tRNA modification GTPase TrmE [Campylobacter coli JV20]
gi|419544912|ref|ZP_14083852.1| tRNA modification GTPase TrmE [Campylobacter coli 2553]
gi|419548431|ref|ZP_14087055.1| tRNA modification GTPase TrmE [Campylobacter coli 2685]
gi|419551315|ref|ZP_14089770.1| tRNA modification GTPase TrmE [Campylobacter coli 2688]
gi|419556153|ref|ZP_14094145.1| tRNA modification GTPase TrmE [Campylobacter coli 84-2]
gi|419557823|ref|ZP_14095720.1| tRNA modification GTPase TrmE [Campylobacter coli 80352]
gi|419561386|ref|ZP_14098997.1| tRNA modification GTPase TrmE [Campylobacter coli 86119]
gi|419563409|ref|ZP_14100856.1| tRNA modification GTPase TrmE [Campylobacter coli 1091]
gi|419566992|ref|ZP_14104233.1| tRNA modification GTPase TrmE [Campylobacter coli 1148]
gi|419567880|ref|ZP_14105031.1| tRNA modification GTPase TrmE [Campylobacter coli 1417]
gi|419573959|ref|ZP_14110740.1| tRNA modification GTPase TrmE [Campylobacter coli 1891]
gi|419577726|ref|ZP_14114271.1| tRNA modification GTPase TrmE [Campylobacter coli 59-2]
gi|419582012|ref|ZP_14118286.1| tRNA modification GTPase TrmE [Campylobacter coli 1957]
gi|419591601|ref|ZP_14126946.1| tRNA modification GTPase TrmE [Campylobacter coli 37/05]
gi|419592910|ref|ZP_14128149.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 9854]
gi|419595813|ref|ZP_14130905.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23336]
gi|419596950|ref|ZP_14131942.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23341]
gi|419598706|ref|ZP_14133583.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23342]
gi|419601127|ref|ZP_14135854.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23344]
gi|419605472|ref|ZP_14139907.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 9853]
gi|419610010|ref|ZP_14144084.1| tRNA modification GTPase TrmE [Campylobacter coli H8]
gi|419613131|ref|ZP_14146987.1| tRNA modification GTPase TrmE [Campylobacter coli H9]
gi|57021001|gb|EAL57665.1| tRNA modification GTPase TrmE [Campylobacter coli RM2228]
gi|304445179|gb|EFM37825.1| tRNA modification GTPase TrmE [Campylobacter coli JV20]
gi|380524617|gb|EIA50217.1| tRNA modification GTPase TrmE [Campylobacter coli 2553]
gi|380527446|gb|EIA52826.1| tRNA modification GTPase TrmE [Campylobacter coli 2685]
gi|380528690|gb|EIA53927.1| tRNA modification GTPase TrmE [Campylobacter coli 2688]
gi|380535096|gb|EIA59830.1| tRNA modification GTPase TrmE [Campylobacter coli 84-2]
gi|380535692|gb|EIA60379.1| tRNA modification GTPase TrmE [Campylobacter coli 86119]
gi|380538189|gb|EIA62701.1| tRNA modification GTPase TrmE [Campylobacter coli 1091]
gi|380541117|gb|EIA65396.1| tRNA modification GTPase TrmE [Campylobacter coli 80352]
gi|380544886|gb|EIA68890.1| tRNA modification GTPase TrmE [Campylobacter coli 1148]
gi|380547083|gb|EIA71013.1| tRNA modification GTPase TrmE [Campylobacter coli 1417]
gi|380550473|gb|EIA74131.1| tRNA modification GTPase TrmE [Campylobacter coli 1891]
gi|380556588|gb|EIA79834.1| tRNA modification GTPase TrmE [Campylobacter coli 59-2]
gi|380557267|gb|EIA80485.1| tRNA modification GTPase TrmE [Campylobacter coli 1957]
gi|380567876|gb|EIA90370.1| tRNA modification GTPase TrmE [Campylobacter coli 37/05]
gi|380571584|gb|EIA93962.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 9854]
gi|380572836|gb|EIA95014.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23336]
gi|380574688|gb|EIA96783.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23341]
gi|380576931|gb|EIA98976.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23342]
gi|380578119|gb|EIA99995.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 9853]
gi|380582161|gb|EIB03848.1| tRNA modification GTPase TrmE [Campylobacter coli LMG 23344]
gi|380588557|gb|EIB09669.1| tRNA modification GTPase TrmE [Campylobacter coli H9]
gi|380591062|gb|EIB12059.1| tRNA modification GTPase TrmE [Campylobacter coli H8]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL 334
>gi|419667019|ref|ZP_14197003.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-10]
gi|380646731|gb|EIB63682.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-10]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|422481210|ref|ZP_16557610.1| ATP/GTP-binding family protein [Propionibacterium acnes HL036PA1]
gi|313822037|gb|EFS59751.1| ATP/GTP-binding family protein [Propionibacterium acnes HL036PA1]
Length = 621
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGHMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + + + D + + P I + + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLVRSQVASN-DASSLQLVAEPDIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q+ + V ++
Sbjct: 173 VTSAARYADAVPWDFLNEAQERHASIAVVCDR 204
>gi|41018339|sp|Q893R0.2|THIE_CLOTE RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
Length = 209
Score = 50.4 bits (119), Expect = 0.004, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 95 VLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDI 153
+L G D +++EA+ +V L S K YE A +K + + +I +RVDI
Sbjct: 18 ILKGRDLKKVLEEAILGGTTLVQLREKNVSSKEFYEIAKDIKVITDKYNIPLIINDRVDI 77
Query: 154 AAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
A AVNA G+ + + LPA + R + + ++G + T++ A A +GAD+L
Sbjct: 78 ALAVNAEGIHIGQKDLPANIVRKIIGED-------KILGVSANTIEDALKA-QRDGADYL 129
Query: 214 --VCCFGEGQKADVIENSLFT------NVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
F K D S+ T V IPI + +V K ++ G +
Sbjct: 130 GVGAIFPTNSKKDAESTSIETLKEIKNAVNIPIVAIGGINENNVQKLKETNIDGIAV 186
>gi|419585904|ref|ZP_14121942.1| tRNA modification GTPase TrmE [Campylobacter coli 202/04]
gi|380561248|gb|EIA84196.1| tRNA modification GTPase TrmE [Campylobacter coli 202/04]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL 334
>gi|419537411|ref|ZP_14076854.1| tRNA modification GTPase TrmE [Campylobacter coli 111-3]
gi|419564817|ref|ZP_14102185.1| tRNA modification GTPase TrmE [Campylobacter coli 1098]
gi|419576123|ref|ZP_14112789.1| tRNA modification GTPase TrmE [Campylobacter coli 1909]
gi|419579970|ref|ZP_14116356.1| tRNA modification GTPase TrmE [Campylobacter coli 1948]
gi|419583660|ref|ZP_14119833.1| tRNA modification GTPase TrmE [Campylobacter coli 1961]
gi|419603609|ref|ZP_14138147.1| tRNA modification GTPase TrmE [Campylobacter coli 151-9]
gi|380514791|gb|EIA40994.1| tRNA modification GTPase TrmE [Campylobacter coli 111-3]
gi|380541280|gb|EIA65551.1| tRNA modification GTPase TrmE [Campylobacter coli 1098]
gi|380551725|gb|EIA75306.1| tRNA modification GTPase TrmE [Campylobacter coli 1909]
gi|380555794|gb|EIA79085.1| tRNA modification GTPase TrmE [Campylobacter coli 1948]
gi|380562374|gb|EIA85245.1| tRNA modification GTPase TrmE [Campylobacter coli 1961]
gi|380578284|gb|EIB00142.1| tRNA modification GTPase TrmE [Campylobacter coli 151-9]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL 334
>gi|427402303|ref|ZP_18893375.1| hypothetical protein HMPREF9710_02971 [Massilia timonae CCUG 45783]
gi|425718836|gb|EKU81779.1| hypothetical protein HMPREF9710_02971 [Massilia timonae CCUG 45783]
Length = 767
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 42/193 (21%)
Query: 348 MEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL--- 404
+EE+ L D ++I + I G +++GKS +N LLG L +G+ PTT T L
Sbjct: 89 VEELVLFPDLANKI----TVGIGGGFSAGKSRFLNTLLGMSMLPEGLGPTTAIPTCLSDG 144
Query: 405 -----------RFSDLASEEQQRCERHPDGQY---------ICYL--------PSPILKE 436
R + EE Q D QY + +L P+
Sbjct: 145 GPAVRARNMMNRMVPVNEEELQALAHGFDRQYRAGDGDTFGLAHLIKLLVIQQPAMRWNN 204
Query: 437 MIIVDTPGTNVILQRQQRLTEEFVPR-----ADLVLFVISA-DRPLTESEVVFLRYTQQW 490
++++DTPG + LT+E + R AD V+++++A + L ++ FLR Q
Sbjct: 205 LVLMDTPGYDKPEGETHSLTDEEIARQHLRQADHVVWLVNAGNGTLRSDDIRFLRSLQH- 263
Query: 491 KKKVVFVLNKSDL 503
+ V FVL ++DL
Sbjct: 264 PRPVYFVLTQADL 276
>gi|57237784|ref|YP_179032.1| tRNA modification GTPase TrmE [Campylobacter jejuni RM1221]
gi|419696310|ref|ZP_14224173.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23210]
gi|424846385|ref|ZP_18270980.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
NW]
gi|81353660|sp|Q5HUK3.1|MNME_CAMJR RecName: Full=tRNA modification GTPase MnmE
gi|57166588|gb|AAW35367.1| tRNA modification GTPase TrmE [Campylobacter jejuni RM1221]
gi|356486028|gb|EHI16014.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
NW]
gi|380674730|gb|EIB89654.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23210]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|419653644|ref|ZP_14184610.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-872]
gi|419665999|ref|ZP_14196050.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-7]
gi|419686146|ref|ZP_14214585.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1798]
gi|380632310|gb|EIB50408.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
2008-872]
gi|380642095|gb|EIB59383.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1997-7]
gi|380665228|gb|EIB80805.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
1798]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|419626129|ref|ZP_14159127.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23223]
gi|380603743|gb|EIB23810.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23223]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+VI Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|228938780|ref|ZP_04101382.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971663|ref|ZP_04132285.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978272|ref|ZP_04138649.1| Reticulocyte binding protein [Bacillus thuringiensis Bt407]
gi|384185577|ref|YP_005571473.1| putative GTPase (dynamin-related) [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410673870|ref|YP_006926241.1| putative GTPase [Bacillus thuringiensis Bt407]
gi|452197895|ref|YP_007477976.1| protein YpbR [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781289|gb|EEM29490.1| Reticulocyte binding protein [Bacillus thuringiensis Bt407]
gi|228788076|gb|EEM36033.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820903|gb|EEM66926.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326939286|gb|AEA15182.1| putative GTPase (dynamin-related) [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409172999|gb|AFV17304.1| putative GTPase [Bacillus thuringiensis Bt407]
gi|452103288|gb|AGG00228.1| protein YpbR [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVREGMERETEHLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLTYEEELASPLLISE-IVEKKEELTETKHREASKESHVRNEFIKGLQ 338
>gi|229078852|ref|ZP_04211405.1| Reticulocyte binding protein [Bacillus cereus Rock4-2]
gi|228704534|gb|EEL56967.1| Reticulocyte binding protein [Bacillus cereus Rock4-2]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + + TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHRLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + RI + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRIGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|423587949|ref|ZP_17564036.1| hypothetical protein IIE_03361 [Bacillus cereus VD045]
gi|401227686|gb|EJR34215.1| hypothetical protein IIE_03361 [Bacillus cereus VD045]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
>gi|419952590|ref|ZP_14468737.1| GTPase [Pseudomonas stutzeri TS44]
gi|387970635|gb|EIK54913.1| GTPase [Pseudomonas stutzeri TS44]
Length = 655
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A VLF++SAD +T S++ ++ R+ Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAVLFMLSADAGVTASDMDIWRRHVCQ 258
Query: 490 W----KKKVVFVLNKSDLYQN--AFE--LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
+ + VLNK D+ + A E + EAI ++ +T + L I++ + P+SA+ L
Sbjct: 259 LDSDTRGNLFAVLNKIDVLWDDPAGEEFVSEAIRQMRASTAQQLGIDSAQVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
K+ A+
Sbjct: 319 LGKVRGDQAL 328
>gi|433463689|ref|ZP_20421232.1| hypothetical protein D479_18824 [Halobacillus sp. BAB-2008]
gi|432187201|gb|ELK44524.1| hypothetical protein D479_18824 [Halobacillus sp. BAB-2008]
Length = 1196
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 327 IETERSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG 386
++ E+ ++ + D+ ++ E + LL + V Q L+ + + S + A +
Sbjct: 677 VKNEKEMMEDLADIRRRMGLQRETLDLLYEEVKQKGTQSDLL-----DQKQLSFLEAFMQ 731
Query: 387 KRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTN 446
+ + T E F F+ ++E++ C + + Y + + +VDTPG +
Sbjct: 732 GYHEMREYLGTRMEAPFDEFTSYVADEKKSC--FIESMELFYDCAWTKAGITLVDTPGAD 789
Query: 447 VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKS 501
+ R ++ +++ AD VLFV + P ++++ FL + K K+ F+LN +
Sbjct: 790 SVNARHTDVSFKYIKDADAVLFVTYYNHPFSQADQSFLTQLGRVKDSFAMDKMFFLLNAA 849
Query: 502 DLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
DL + EL++ ++KE + I +Y VS+ L+ K
Sbjct: 850 DLAASEEELQQVEMYMKEQLLG-FQIRKPRLYSVSSLLALKEK 891
>gi|91787194|ref|YP_548146.1| hypothetical protein Bpro_1298 [Polaromonas sp. JS666]
gi|91696419|gb|ABE43248.1| conserved hypothetical protein [Polaromonas sp. JS666]
Length = 659
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ + P+LK+ ++I+DTPG N I + LT +P+A V+F+++AD +T+S++
Sbjct: 194 LINIAHPLLKQGLVILDTPGLNAI-GAEPELTVSLIPQAHAVVFILAADTGVTKSDLSI- 251
Query: 485 RYTQQWKKKVV----------FVLNKSDLYQNAF----ELEEAISFVKENTMKLLNIENV 530
W++ ++ VLNK D +A +++ I + + ++L +
Sbjct: 252 -----WREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEILGLPES 306
Query: 531 TIYPVSARSTLEAKLSVSSAV 551
+ PVSA+ L AK++ A+
Sbjct: 307 QVIPVSAQKGLLAKVTGDKAL 327
>gi|229043417|ref|ZP_04191133.1| Reticulocyte binding protein [Bacillus cereus AH676]
gi|228725925|gb|EEL77166.1| Reticulocyte binding protein [Bacillus cereus AH676]
Length = 1210
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 272 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESYVRNEFIKGLQ 329
>gi|229016925|ref|ZP_04173852.1| Reticulocyte binding protein [Bacillus cereus AH1273]
gi|423392031|ref|ZP_17369257.1| hypothetical protein ICG_03879 [Bacillus cereus BAG1X1-3]
gi|228744386|gb|EEL94461.1| Reticulocyte binding protein [Bacillus cereus AH1273]
gi|401637864|gb|EJS55617.1| hypothetical protein ICG_03879 [Bacillus cereus BAG1X1-3]
Length = 1219
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A++QID+ ++ SGK + L R +
Sbjct: 680 KQALLEDVKAVYKL--FHYEITTLDEALTQIDK----IMKYPSPSGKQKTTFSFL--RAV 731
Query: 391 KDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 732 QKGYEAVAAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEEYRESVKQS 221
>gi|194016730|ref|ZP_03055343.1| conserved protein YpbR [Bacillus pumilus ATCC 7061]
gi|194011336|gb|EDW20905.1| conserved protein YpbR [Bacillus pumilus ATCC 7061]
Length = 1199
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 427 CYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
YL +P+ K + IVDTPG + + +R + +++ AD +L++ ++++ FLR
Sbjct: 766 VYLSTPLTDKGLTIVDTPGASSMNKRHTEIAFQYMKDADALLYLTYYQHSFSKADRSFLR 825
Query: 486 YTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
K K+ F++N +DL ++ EL+ +VK N + I N ++ VS++
Sbjct: 826 KLGLVKDSFSMDKMFFIINAADLAKDQAELDTVFDYVK-NELTKEGIRNPNLHHVSSKEE 884
Query: 541 LEA 543
+E
Sbjct: 885 IEG 887
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFL--------------RFS 407
+E + G Y++GKSS++N LL L +PT+ + + RF+
Sbjct: 42 EEEVYIAFTGHYSAGKSSLVNHLLHDHILPTSPIPTSANLVVVRKGESEVQLHTSDGRFA 101
Query: 408 DLA-SEEQQRCERH-PDGQYICYLPSP-----ILKEMIIVDTPGTNVILQRQQRLTEEFV 460
++ S +++ +R DG+ I + + +++ ++DTPG + +
Sbjct: 102 KMSGSYDKEAVQRFCKDGEQIEMVEISGDYIGLEEKVALIDTPGIDSTDHAHFLSAASIL 161
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLN---KSDLYQNAFE 509
+AD + +V+ + +E + F+R ++ + F++N + D ++ AFE
Sbjct: 162 HQADALFYVVHYNHVHSEENIRFIRSIKEKVPNLYFIVNQVDRHDEHETAFE 213
>gi|389580883|ref|ZP_10170910.1| dynamin family protein [Desulfobacter postgatei 2ac9]
gi|389402518|gb|EIM64740.1| dynamin family protein [Desulfobacter postgatei 2ac9]
Length = 542
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 35/172 (20%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE-EQQRCERHPDGQ 424
+++++G Y+SGKSS+IN LG + G PT + T L + D E E + DG+
Sbjct: 87 MVLVIGNYSSGKSSLINEFLGAKIQDTGQAPTDDSFTVLTYDDSVPETEGIQVVEQRDGK 146
Query: 425 YICYLP------------------------SPILKEMIIVDTPGTNVILQRQQR------ 454
+ P SP LK + I+DTPG + R
Sbjct: 147 SLLNDPEYPFSTLRKHGQRFAAHFQLKRINSPFLKNLAIIDTPGMLDSISEMDRGYDYQE 206
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVV-FLRYT---QQWKKKVVFVLNKSD 502
+ + +A LVL + A + T E +R T + +++FVLN+ D
Sbjct: 207 VLGDLAQKAGLVLVLFDAHKAGTVREAYKSIRETLTAHTSEDRIIFVLNRID 258
>gi|419543081|ref|ZP_14082178.1| tRNA modification GTPase TrmE [Campylobacter coli 2548]
gi|419553437|ref|ZP_14091680.1| tRNA modification GTPase TrmE [Campylobacter coli 2692]
gi|380521098|gb|EIA46846.1| tRNA modification GTPase TrmE [Campylobacter coli 2548]
gi|380528774|gb|EIA53999.1| tRNA modification GTPase TrmE [Campylobacter coli 2692]
Length = 442
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQSDKKIFYLLNKSDL 334
>gi|389776737|ref|ZP_10194133.1| hypothetical protein UU7_09425 [Rhodanobacter spathiphylli B39]
gi|388436329|gb|EIL93197.1| hypothetical protein UU7_09425 [Rhodanobacter spathiphylli B39]
Length = 454
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 26/165 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G ++GKS++ NALLG+ GV+ T +D +E E DG
Sbjct: 78 VAVFGRVSAGKSALGNALLGREAFAVGVLHGTT-------TD--AEHAMLDEAQHDG--- 125
Query: 427 CYLPSPILKEMIIVDTPGTNVI-LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
++++DTPG N + + +++L E +DLV+FV D LT E+ L+
Sbjct: 126 ----------LVLIDTPGINELDGEAREKLAFEVAEVSDLVIFVCDGD--LTREELDALK 173
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENV 530
++ ++ LNK+D Y EL+ + ++ L+ E+V
Sbjct: 174 SLAATQRPLLLALNKADRYGR-DELDGLLEHLRLRVAGLVRAEDV 217
>gi|320163526|gb|EFW40425.1| transmembrane GTPase Marf [Capsaspora owczarzaki ATCC 30864]
Length = 888
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 51/252 (20%)
Query: 335 LEAIDVIKKASPLMEEVSLLIDAVSQIDEPF-----LLVIVGEYNSGKSSVINALLGKRY 389
+EA D +K+ +E+ + VS I + F +V VG+ ++GKS+V+NA+L R
Sbjct: 87 IEADDFMKE----QKEIGVFSSQVSSISKLFERDHMKVVFVGQTSNGKSTVVNAMLYNRI 142
Query: 390 LKDGVVPTTNEITFLRFSD---------LASEEQQRCE-------RHPDGQY------IC 427
L G+ TTN + SD L+SE+Q HP+G
Sbjct: 143 LPSGIGHTTNCFVSVSGSDANTPYIIDSLSSEQQPISNVLQLANALHPEGSLNQSGLIRV 202
Query: 428 YLPSPILK----EMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE-VV 482
+ P+ + ++ ++D+PG ++ Q + +++ AD+ + V +A+ L +E
Sbjct: 203 FWPTTKCRLLGDDVDLIDSPGLDLSNDINQWI-DDYCMDADVFVLVANAEATLKVAERAF 261
Query: 483 FLRYTQQWKKKVVFVL-NKSDLYQNAFE----------LEEAISFVKENTMKLLNIENV- 530
F + ++ K VF+L N+ D N + LE A F+ + +K+++ +
Sbjct: 262 FFKVNEKLSKPNVFILNNRWDASDNEIDDSPERVREQHLEYASKFLADE-LKVVSRSKIL 320
Query: 531 -TIYPVSARSTL 541
++ VSAR TL
Sbjct: 321 DRVFFVSARETL 332
>gi|379059117|ref|ZP_09849643.1| hypothetical protein SproM1_13650 [Serinicoccus profundi MCCC
1A05965]
Length = 566
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 14/154 (9%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLR-------FSD---- 408
+D P L V+ G +GKS+++N+++G+ + G++ PTT + F+D
Sbjct: 56 LDAPLLAVVGGSTGAGKSTLVNSVVGEEVSRAGILRPTTRASVLVHHPQDAAWFTDTRVL 115
Query: 409 --LASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLV 466
LA E G + + ++D P + ++Q ++L+++ + ADL
Sbjct: 116 PGLARIGGDAAEVEDPGAVRLVASEALPSGLALLDAPDIDSVVQANRQLSKQLLSAADLW 175
Query: 467 LFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
LFV +A R LR + V VLN+
Sbjct: 176 LFVTTAARYADAVPWGLLREASERGTSVAIVLNR 209
>gi|228964650|ref|ZP_04125758.1| Reticulocyte binding protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228795081|gb|EEM42579.1| Reticulocyte binding protein [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 1210
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPQNEIGSLETLITSIMKEKEQYVRDGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 272 FSFILSENEKALLTYEEELASPLSISE-IVEKKEELTEIKHREASKESHVRNEFIKGLQ 329
>gi|229189751|ref|ZP_04316765.1| Reticulocyte binding protein [Bacillus cereus ATCC 10876]
gi|228593800|gb|EEK51605.1| Reticulocyte binding protein [Bacillus cereus ATCC 10876]
Length = 1210
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFSLDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKDYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPHNEIGSLETLITSIMKEKEQYVRNGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 272 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 329
>gi|351730203|ref|ZP_08947894.1| hypothetical protein AradN_10540 [Acidovorax radicis N35]
Length = 653
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+F++SAD +T S++
Sbjct: 196 LINIPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFILSADTGVTRSDLSIW 254
Query: 485 R----YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKE----NTMKLLNIENVTIYPVS 536
R + + VLNK D + E + E + ++L + + PVS
Sbjct: 255 REHLAISADSMDARLVVLNKIDTLWDTLNSAEQVQAQMERQCRTSAEMLGVPLDRVVPVS 314
Query: 537 ARSTLEAKLS 546
A+ L AK++
Sbjct: 315 AQKGLVAKIT 324
>gi|218231058|ref|YP_002366353.1| hypothetical protein BCB4264_A1630 [Bacillus cereus B4264]
gi|229149871|ref|ZP_04278099.1| Reticulocyte binding protein [Bacillus cereus m1550]
gi|218159015|gb|ACK59007.1| conserved hypothetical protein [Bacillus cereus B4264]
gi|228633552|gb|EEK90153.1| Reticulocyte binding protein [Bacillus cereus m1550]
Length = 1219
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIFSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ + +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDK------IMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|37519972|ref|NP_923349.1| thiamine-phosphate pyrophosphorylase [Gloeobacter violaceus PCC
7421]
gi|35210964|dbj|BAC88344.1| thiE [Gloeobacter violaceus PCC 7421]
Length = 366
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 74 GGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAAC 133
GG R + + L PH L +++++ A+A + +V L EA ++V + A
Sbjct: 158 GGDLRTRLAAARLYLVTSPHPEL-----IEIVEHALAVGLPLVQLREKEAPARAVLDIAL 212
Query: 134 LLKSV-VKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVG 192
L+ V ++ ALF++ +RVD+A A A GV L + LP AR M + L+G
Sbjct: 213 RLRDVTLRHGALFIVNDRVDLALACGADGVHLGQEDLPLARARALMGPRL-------LIG 265
Query: 193 RNVQTLDAAFNASSSEGADFL 213
++ A + ++GAD+L
Sbjct: 266 QSTHA-PAEAQQAVADGADYL 285
>gi|289426422|ref|ZP_06428165.1| ATP/GTP-binding family protein [Propionibacterium acnes SK187]
gi|289428758|ref|ZP_06430441.1| ATP/GTP-binding family protein [Propionibacterium acnes J165]
gi|295131159|ref|YP_003581822.1| ATP/GTP-binding family protein [Propionibacterium acnes SK137]
gi|354607626|ref|ZP_09025594.1| hypothetical protein HMPREF1003_02161 [Propionibacterium sp.
5_U_42AFAA]
gi|386024577|ref|YP_005942882.1| putative ABC transporter [Propionibacterium acnes 266]
gi|407936029|ref|YP_006851671.1| ABC transporter [Propionibacterium acnes C1]
gi|417930221|ref|ZP_12573600.1| dynamin domain protein [Propionibacterium acnes SK182]
gi|422385433|ref|ZP_16465565.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL096PA3]
gi|422387921|ref|ZP_16468032.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL096PA2]
gi|422393842|ref|ZP_16473892.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL099PA1]
gi|422425417|ref|ZP_16502351.1| ATP/GTP-binding family protein [Propionibacterium acnes HL043PA1]
gi|422430476|ref|ZP_16507356.1| ATP/GTP-binding family protein [Propionibacterium acnes HL072PA2]
gi|422449503|ref|ZP_16526227.1| ATP/GTP-binding family protein [Propionibacterium acnes HL036PA3]
gi|422462510|ref|ZP_16539132.1| ATP/GTP-binding family protein [Propionibacterium acnes HL038PA1]
gi|422474267|ref|ZP_16550736.1| ATP/GTP-binding family protein [Propionibacterium acnes HL056PA1]
gi|422477157|ref|ZP_16553590.1| ATP/GTP-binding family protein [Propionibacterium acnes HL007PA1]
gi|422480123|ref|ZP_16556527.1| ATP/GTP-binding family protein [Propionibacterium acnes HL063PA1]
gi|422486168|ref|ZP_16562525.1| ATP/GTP-binding family protein [Propionibacterium acnes HL043PA2]
gi|422487283|ref|ZP_16563615.1| ATP/GTP-binding family protein [Propionibacterium acnes HL013PA2]
gi|422491252|ref|ZP_16567566.1| ATP/GTP-binding family protein [Propionibacterium acnes HL020PA1]
gi|422496935|ref|ZP_16573212.1| ATP/GTP-binding family protein [Propionibacterium acnes HL002PA3]
gi|422503126|ref|ZP_16579367.1| ATP/GTP-binding family protein [Propionibacterium acnes HL027PA2]
gi|422505591|ref|ZP_16581821.1| ATP/GTP-binding family protein [Propionibacterium acnes HL036PA2]
gi|422507096|ref|ZP_16583314.1| ATP/GTP-binding family protein [Propionibacterium acnes HL046PA2]
gi|422513008|ref|ZP_16589135.1| ATP/GTP-binding family protein [Propionibacterium acnes HL087PA2]
gi|422517176|ref|ZP_16593276.1| ATP/GTP-binding family protein [Propionibacterium acnes HL074PA1]
gi|422521352|ref|ZP_16597384.1| ATP/GTP-binding family protein [Propionibacterium acnes HL045PA1]
gi|422525575|ref|ZP_16601576.1| ATP/GTP-binding family protein [Propionibacterium acnes HL083PA1]
gi|422528790|ref|ZP_16604765.1| ATP/GTP-binding family protein [Propionibacterium acnes HL053PA1]
gi|422533584|ref|ZP_16609515.1| ATP/GTP-binding family protein [Propionibacterium acnes HL072PA1]
gi|422536583|ref|ZP_16612486.1| ATP/GTP-binding family protein [Propionibacterium acnes HL078PA1]
gi|422551298|ref|ZP_16627093.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA3]
gi|422555660|ref|ZP_16631428.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA2]
gi|422560475|ref|ZP_16636165.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA1]
gi|422566942|ref|ZP_16642570.1| ATP/GTP-binding family protein [Propionibacterium acnes HL002PA2]
gi|289153150|gb|EFD01868.1| ATP/GTP-binding family protein [Propionibacterium acnes SK187]
gi|289158156|gb|EFD06376.1| ATP/GTP-binding family protein [Propionibacterium acnes J165]
gi|291376149|gb|ADE00004.1| ATP/GTP-binding family protein [Propionibacterium acnes SK137]
gi|313773623|gb|EFS39589.1| ATP/GTP-binding family protein [Propionibacterium acnes HL074PA1]
gi|313808069|gb|EFS46550.1| ATP/GTP-binding family protein [Propionibacterium acnes HL087PA2]
gi|313811459|gb|EFS49173.1| ATP/GTP-binding family protein [Propionibacterium acnes HL083PA1]
gi|313819639|gb|EFS57353.1| ATP/GTP-binding family protein [Propionibacterium acnes HL046PA2]
gi|313823727|gb|EFS61441.1| ATP/GTP-binding family protein [Propionibacterium acnes HL036PA2]
gi|313826049|gb|EFS63763.1| ATP/GTP-binding family protein [Propionibacterium acnes HL063PA1]
gi|313831199|gb|EFS68913.1| ATP/GTP-binding family protein [Propionibacterium acnes HL007PA1]
gi|313834222|gb|EFS71936.1| ATP/GTP-binding family protein [Propionibacterium acnes HL056PA1]
gi|314924780|gb|EFS88611.1| ATP/GTP-binding family protein [Propionibacterium acnes HL036PA3]
gi|314961979|gb|EFT06080.1| ATP/GTP-binding family protein [Propionibacterium acnes HL002PA2]
gi|314974076|gb|EFT18172.1| ATP/GTP-binding family protein [Propionibacterium acnes HL053PA1]
gi|314976635|gb|EFT20730.1| ATP/GTP-binding family protein [Propionibacterium acnes HL045PA1]
gi|314978915|gb|EFT23009.1| ATP/GTP-binding family protein [Propionibacterium acnes HL072PA2]
gi|314984298|gb|EFT28390.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA1]
gi|314986644|gb|EFT30736.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA2]
gi|314991000|gb|EFT35091.1| ATP/GTP-binding family protein [Propionibacterium acnes HL005PA3]
gi|315081135|gb|EFT53111.1| ATP/GTP-binding family protein [Propionibacterium acnes HL078PA1]
gi|315083653|gb|EFT55629.1| ATP/GTP-binding family protein [Propionibacterium acnes HL027PA2]
gi|315087022|gb|EFT58998.1| ATP/GTP-binding family protein [Propionibacterium acnes HL002PA3]
gi|315089197|gb|EFT61173.1| ATP/GTP-binding family protein [Propionibacterium acnes HL072PA1]
gi|315095420|gb|EFT67396.1| ATP/GTP-binding family protein [Propionibacterium acnes HL038PA1]
gi|327328521|gb|EGE70283.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL096PA2]
gi|327329614|gb|EGE71370.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL096PA3]
gi|327444308|gb|EGE90962.1| ATP/GTP-binding family protein [Propionibacterium acnes HL043PA2]
gi|327444810|gb|EGE91464.1| ATP/GTP-binding family protein [Propionibacterium acnes HL043PA1]
gi|327446298|gb|EGE92952.1| ATP/GTP-binding family protein [Propionibacterium acnes HL013PA2]
gi|328752443|gb|EGF66059.1| ATP/GTP-binding family protein [Propionibacterium acnes HL020PA1]
gi|328759956|gb|EGF73540.1| putative ATP/GTP-binding protein [Propionibacterium acnes HL099PA1]
gi|332676035|gb|AEE72851.1| putative ABC transporter [Propionibacterium acnes 266]
gi|340772348|gb|EGR94852.1| dynamin domain protein [Propionibacterium acnes SK182]
gi|353556172|gb|EHC25543.1| hypothetical protein HMPREF1003_02161 [Propionibacterium sp.
5_U_42AFAA]
gi|407904610|gb|AFU41440.1| putative ABC transporter [Propionibacterium acnes C1]
gi|456738737|gb|EMF63304.1| ABC transporter [Propionibacterium acnes FZ1/2/0]
Length = 621
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFLRFSD----------L 409
ID P L V+ G +GKS+++N+L+G + GV+ PTT + D L
Sbjct: 54 IDAPLLAVVGGSTGAGKSTLVNSLVGHMVTQPGVIRPTTTSPVLVHHPDDAFWFDGDRVL 113
Query: 410 ASEEQQRCERHPDGQYICYLPSP-ILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + + + D + + P I + + I+D P + ++ R + L + + ADL +F
Sbjct: 114 PTLVRSQVASN-DASSLQLVAEPDIPRGLAILDAPDIDSVVTRNRDLAAQLLQAADLWVF 172
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
V SA R FL Q+ + V ++
Sbjct: 173 VTSAARYADAVPWDFLNEAQERHASIAVVCDR 204
>gi|254430338|ref|ZP_05044041.1| GTP-binding protein [Cyanobium sp. PCC 7001]
gi|197624791|gb|EDY37350.1| GTP-binding protein [Cyanobium sp. PCC 7001]
Length = 443
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG+ A++ C RH
Sbjct: 51 VAVFGRVGVGKSSLLNALLGEEV-------------------FATDVAHGCTRHQRAAA- 90
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
+ P L+ +VDTPGT+ + + RL ADLVL V+ AD ESE + +
Sbjct: 91 WHQPLAGLQGAELVDTPGTDEIAAASRARLAGRVALGADLVLMVLDADLSRVESEALEVL 150
Query: 486 YTQQWKKKVVFVLNKSDLY 504
K ++ VLN+SD +
Sbjct: 151 LAS--GKPLLLVLNRSDCW 167
>gi|374851375|dbj|BAL54337.1| thiamine-phosphate pyrophosphorylase [uncultured Aquificae
bacterium]
Length = 154
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 124 SGKSVYEAACLLKSVVKD-RALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSM 182
S K Y+ A + + ++ AL LI ERVDIA AV A GV L GLP R KD
Sbjct: 10 SAKEYYQKALKAREITREYSALLLINERVDIALAVGADGVHLPQNGLPPSAVRRLKKDL- 68
Query: 183 SESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
+VG + L +A A EGADF+
Sbjct: 69 -------IVGFSAHDLKSALYA-QEEGADFI 91
>gi|407979405|ref|ZP_11160220.1| hypothetical protein BA1_09376 [Bacillus sp. HYC-10]
gi|407413902|gb|EKF35576.1| hypothetical protein BA1_09376 [Bacillus sp. HYC-10]
Length = 1197
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 427 CYLPSPIL-KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
YL +P+ K + IVDTPG + + +R + +++ AD +L++ ++++ FLR
Sbjct: 764 VYLSTPLTDKGLTIVDTPGASSMNKRHTEIAFQYMKDADALLYLTYYQHSFSKADRSFLR 823
Query: 486 YTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
K K+ F++N +DL ++ ELE +V+ N + I + ++ VS++
Sbjct: 824 KLGLVKDSFSMDKMFFIINAADLAKDQAELETVFDYVR-NELTKEGIRHPNLHHVSSKEE 882
Query: 541 LEAK 544
+E K
Sbjct: 883 IEGK 886
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--------------FS 407
+E + G Y++GKSS++N LL L +PT+ + +R F+
Sbjct: 42 EEEVYIAFTGHYSAGKSSLVNYLLHDHILPTSPIPTSANLVVVRKGVSEVKLHTSDGRFA 101
Query: 408 DLA-SEEQQRCERH-PDGQYICYLP-----SPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
++ S ++ +R DG+ I + + +++ ++DTPG + +
Sbjct: 102 KMSGSYDKDAVQRFCKDGEQIEMVEISGNYKGLEEKVALIDTPGIDSTDHAHFLSAASIL 161
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
+AD + +V+ + +E + F+R ++ + F++N+ D +
Sbjct: 162 HQADALFYVVHYNHVHSEENIRFIRSIKEKVPNLYFIVNQVDRH 205
>gi|296502244|ref|YP_003663944.1| GTPase [Bacillus thuringiensis BMB171]
gi|296323296|gb|ADH06224.1| putative GTPase (dynamin-related) [Bacillus thuringiensis BMB171]
Length = 1219
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIRSLEALITSIMKEKEQYVRTGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFIVSENEKALLKYEEELASPLSISE-VVEKKEELTEAKNREASKESHVRNEFIKGLQ 338
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E+ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIVTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|423606610|ref|ZP_17582503.1| hypothetical protein IIK_03191 [Bacillus cereus VD102]
gi|401241435|gb|EJR47823.1| hypothetical protein IIK_03191 [Bacillus cereus VD102]
Length = 1237
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A++QID+ V+ +GK + L R +
Sbjct: 698 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK----VMKNPSPTGKQKTTFSFL--RAV 749
Query: 391 KDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G + ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 750 QKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 806
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 807 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 866
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 867 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 911
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 60 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 119
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 120 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 179
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 180 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYSDSVKQ- 238
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 239 SFSNWDIEVDGVYYTSLRMMNHPHNEIENIETLITSIMKE-KEQYVRDGMVRETEYLMGE 297
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 298 H--FSFIVSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 354
Query: 635 LK 636
L+
Sbjct: 355 LQ 356
>gi|419547633|ref|ZP_14086327.1| tRNA modification GTPase TrmE [Campylobacter coli 2680]
gi|380520224|gb|EIA46113.1| tRNA modification GTPase TrmE [Campylobacter coli 2680]
Length = 442
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L ++ + E F + IVG+ N GKSS++NALL KR
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSESKKGLIEGFKIAIVGKPNVGKSSLLNALLSYKRA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
+ I Q L+++ + AD++L + R E + + Q KK+ ++LNKSDL
Sbjct: 277 DEIEQIGIELSKKSIEDADIILAIFDNSRKKDEEDENIFKLLSQNDKKIFYLLNKSDL 334
>gi|291533878|emb|CBL06991.1| ribosome-associated GTPase EngA [Megamonas hypermegale ART12/1]
Length = 401
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ ++G N GKSS++NALLG+ R + V TT + +F D +
Sbjct: 138 IAVIGRPNVGKSSLVNALLGQERVIVSDVAGTTRDAIDTKFDD-------------GNTH 184
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
+ + ++ +D P + R R V RAD+VL VISA +TE +
Sbjct: 185 FTLIDTAGMRRKGKIDMPIERYSVMRSLRA----VDRADVVLMVISAPEGVTEQDKKIAG 240
Query: 486 YTQQWKKKVVFVLNKSDLYQ 505
Y + K + V+NK DL +
Sbjct: 241 YAHESGKGCIIVVNKWDLIE 260
>gi|448499017|ref|ZP_21611179.1| thiamine-phosphate pyrophosphorylase [Halorubrum coriense DSM
10284]
gi|445697770|gb|ELZ49829.1| thiamine-phosphate pyrophosphorylase [Halorubrum coriense DSM
10284]
Length = 210
Score = 50.4 bits (119), Expect = 0.005, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAA 155
AG +++ A+ V +V L S + YE ++ + A+ L+ +R+D+AA
Sbjct: 18 AGRSTAEVVAAALDGGVDVVQLRDKGVSDRERYETGLRVRELTAAAAVPLLVNDRIDLAA 77
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
A++A GV L LP VAR D + ES V VG + T+D A A ++ GAD+L
Sbjct: 78 AIDADGVHLGQSDLPVAVAR----DRLGESAV---VGVSASTVDQAREAEAA-GADYL 127
>gi|384179603|ref|YP_005565365.1| reticulocyte binding protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324325687|gb|ADY20947.1| reticulocyte binding protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 1219
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + + S + + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIGNLETLITSIMKEKEQYVRAGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 VSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKGLQ 338
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ EL+ ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELKMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|41018273|sp|Q7NNK8.2|THIE_GLOVI RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
Length = 341
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 74 GGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAAC 133
GG R + + L PH L +++++ A+A + +V L EA ++V + A
Sbjct: 133 GGDLRTRLAAARLYLVTSPHPEL-----IEIVEHALAVGLPLVQLREKEAPARAVLDIAL 187
Query: 134 LLKSV-VKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVG 192
L+ V ++ ALF++ +RVD+A A A GV L + LP AR M + L+G
Sbjct: 188 RLRDVTLRHGALFIVNDRVDLALACGADGVHLGQEDLPLARARALMGPRL-------LIG 240
Query: 193 RNVQTLDAAFNASSSEGADFL 213
++ A + ++GAD+L
Sbjct: 241 QSTHA-PAEAQQAVADGADYL 260
>gi|393200955|ref|YP_006462797.1| GTPase [Solibacillus silvestris StLB046]
gi|327440286|dbj|BAK16651.1| predicted GTPase [Solibacillus silvestris StLB046]
Length = 605
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 33/156 (21%)
Query: 356 DAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLA----- 410
DA SQ P +L I G+ GK++VIN+L+G+ L+D T TFL++SD
Sbjct: 51 DADSQ---PIVLFI-GKERVGKTTVINSLIGRNLLEDRPSEPTRTNTFLKYSDEEYIKAV 106
Query: 411 ---------------------SEEQQRCERHPDGQYI-CYLPSPILKEMIIVDTPGTNVI 448
SE Q +H D Y+ Y+ +LK++ IVD+
Sbjct: 107 FLNGMEVIFDIANLSLFTISNSESAQIIRKHLD--YLEVYITCELLKKVTIVDSVALETG 164
Query: 449 LQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ + R+D V +V+ A P TE+EV F+
Sbjct: 165 ANNTAYFSPALLQRSDEVFWVLQAGSPATEAEVNFI 200
>gi|421619608|ref|ZP_16060560.1| GTPase [Pseudomonas stutzeri KOS6]
gi|409778398|gb|EKN58099.1| GTPase [Pseudomonas stutzeri KOS6]
Length = 656
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A ++F++SAD +T S++ ++ ++ +Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAIVFLLSADTGVTASDMQIWQQHIRQ 258
Query: 490 W----KKKVVFVLNKSDLYQN-----AFELEEAISFVKENTMKLLNIENVTIYPVSARST 540
+ + VLNK D+ + AF + AI ++ +T + L I++ + P+SA+
Sbjct: 259 LGDDTRNNLFAVLNKIDVLWDDVAGEAF-VRNAIEQIRTSTAQQLGIDSADVLPLSAKQA 317
Query: 541 LEAKLSVSSAV 551
L AK+ A+
Sbjct: 318 LMAKIRGDQAL 328
>gi|423460451|ref|ZP_17437248.1| hypothetical protein IEI_03591 [Bacillus cereus BAG5X2-1]
gi|401140504|gb|EJQ48060.1| hypothetical protein IEI_03591 [Bacillus cereus BAG5X2-1]
Length = 1219
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHTHNEIGSLETLITSIMKEKVQYVRDGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFILSENEKALLKYEEELASPLSISE-IVEKKEELTETKQREASKESHVRNEFIKGLQ 338
>gi|384443310|ref|YP_005659562.1| GTPase and tRNA-U34 5-formylation enzyme TrmE [Campylobacter jejuni
subsp. jejuni S3]
gi|315058397|gb|ADT72726.1| GTPase and tRNA-U34 5-formylation enzyme TrmE [Campylobacter jejuni
subsp. jejuni S3]
Length = 442
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 31/196 (15%)
Query: 334 LLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRYLK 391
LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R +
Sbjct: 183 LLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERAIV 242
Query: 392 DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT----NV 447
+ TT + EE + H + I+DT G +V
Sbjct: 243 SDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESKDV 278
Query: 448 ILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNA 507
I Q L+++ + AD++L V A R + + KK+ ++LNKSDL +N
Sbjct: 279 IEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL-ENV 337
Query: 508 FELEEAISFVKENTMK 523
F+ + +F+K + K
Sbjct: 338 FKNTQNKNFIKLSAQK 353
>gi|229029351|ref|ZP_04185438.1| Reticulocyte binding protein [Bacillus cereus AH1271]
gi|228731965|gb|EEL82860.1| Reticulocyte binding protein [Bacillus cereus AH1271]
Length = 1210
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKLFHF--EITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDTVSAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 212 SFSNWDIEVDGVYYTSLR 229
>gi|406592818|ref|YP_006739998.1| GTP-binding domain-containing protein [Chlamydia psittaci CP3]
gi|405788690|gb|AFS27433.1| small GTP-binding domain protein [Chlamydia psittaci CP3]
Length = 474
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL + R + D + TT + + +S +
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNIPGTTRDNIDILYS------------Y 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQ 505
L + KK + ++NK DL Q
Sbjct: 312 KRILSLISKQKKPHIILVNKWDLIQ 336
>gi|300117403|ref|ZP_07055193.1| hypothetical protein BCSJ1_00700 [Bacillus cereus SJ1]
gi|298725238|gb|EFI65890.1| hypothetical protein BCSJ1_00700 [Bacillus cereus SJ1]
Length = 630
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|423420381|ref|ZP_17397470.1| hypothetical protein IE3_03853 [Bacillus cereus BAG3X2-1]
gi|401102290|gb|EJQ10277.1| hypothetical protein IE3_03853 [Bacillus cereus BAG3X2-1]
Length = 1219
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYL 390
+ LLE + + K E++ L +A++QID+ ++ SGK + L R +
Sbjct: 680 KQALLEDVKAVYKL--FHYEITTLDEALTQIDK----IMKYPSPSGKQKTTFSFL--RAV 731
Query: 391 KDGV------VPTTNEITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
+ G + ++T FSD + E++ C + + Y C L + + +VDTP
Sbjct: 732 QKGYEVVAAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPDGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N EE VK++
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEEYRESVKQS 221
>gi|284928710|ref|YP_003421232.1| small GTP-binding protein domain protein [cyanobacterium UCYN-A]
gi|284809169|gb|ADB94874.1| small GTP-binding protein domain protein [cyanobacterium UCYN-A]
Length = 437
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ I G + GKS+++NAL+G+ SE + P
Sbjct: 53 IAIFGLVSRGKSAIVNALVGQNIFN-------------------SEPINGTTKWPKS--F 91
Query: 427 CYLPSPILKEMIIVDTPGTNVILQRQQR-LTEEFVPRADLVLFVISADRPLTESEVVFLR 485
+ PS + +DTPG + I Q+ +++E +DL+LFVIS D + E E L
Sbjct: 92 RWFPSDTKVILEFIDTPGLDEIDGIQKSIMSQEVAEESDLILFVISED--IIEVEYKALI 149
Query: 486 YTQQWKKKVVFVLNKSDLYQNAF------ELEEAISFVKENTMKLLNIENVTIYPVSARS 539
Y ++ K ++ V NK DLY L+E +K L+NI+++ + S RS
Sbjct: 150 YLKKLLKPIILVFNKIDLYPKKTCLDIYKHLQEFSKNIKNEEALLINIQDILLVAASPRS 209
Query: 540 TLEAKLSVSSAVGKDHSELSV 560
+ V S G+ EL V
Sbjct: 210 I---PVKVRSFDGQIREELEV 227
>gi|289581481|ref|YP_003479947.1| thiamine-phosphate pyrophosphorylase [Natrialba magadii ATCC 43099]
gi|448283103|ref|ZP_21474382.1| thiamine-phosphate pyrophosphorylase [Natrialba magadii ATCC 43099]
gi|289531034|gb|ADD05385.1| thiamine-phosphate pyrophosphorylase [Natrialba magadii ATCC 43099]
gi|445574811|gb|ELY29299.1| thiamine-phosphate pyrophosphorylase [Natrialba magadii ATCC 43099]
Length = 221
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 95 VLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDI 153
V AG L++++ A+A V +V L + + YE L+ + + + LI +RVDI
Sbjct: 16 VSAGRSTLEIVEAAIAGGVDVVQLREKDTDTRFRYELGRELRELTAEAGVGLIVNDRVDI 75
Query: 154 AAAVNASGVLLSDQGLPAIVARNTM-KDSMSESVVLPLVGRNVQTLDAAFNASSSEGADF 212
A A++A GV + LP VAR+ + DS +VG + T+DAA A ++GAD+
Sbjct: 76 AQAIDADGVHVGQSDLPVSVARDLLGPDS--------IVGCSTGTVDAAEQA-EADGADY 126
Query: 213 L 213
+
Sbjct: 127 V 127
>gi|329943260|ref|ZP_08292034.1| small GTP-binding domain protein [Chlamydophila psittaci Cal10]
gi|332287839|ref|YP_004422740.1| ribosome-associated GTPase [Chlamydophila psittaci 6BC]
gi|384451006|ref|YP_005663606.1| GTP-binding protein engA [Chlamydophila psittaci 6BC]
gi|384451993|ref|YP_005664591.1| ribosome-associated GTPase [Chlamydophila psittaci 01DC11]
gi|384452967|ref|YP_005665564.1| ribosome-associated GTPase [Chlamydophila psittaci 08DC60]
gi|384453946|ref|YP_005666542.1| ribosome-associated GTPase [Chlamydophila psittaci C19/98]
gi|384454925|ref|YP_005667520.1| ribosome-associated GTPase [Chlamydophila psittaci 02DC15]
gi|392377068|ref|YP_004064846.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|407454495|ref|YP_006733603.1| GTP-binding domain-containing protein [Chlamydia psittaci 84/55]
gi|407461116|ref|YP_006738891.1| GTP-binding domain-containing protein [Chlamydia psittaci WC]
gi|449071567|ref|YP_007438647.1| GTP-binding protein EngA [Chlamydophila psittaci Mat116]
gi|313848411|emb|CBY17415.1| putative GTP-binding protein [Chlamydophila psittaci RD1]
gi|325506575|gb|ADZ18213.1| ribosome-associated GTPase [Chlamydophila psittaci 6BC]
gi|328814807|gb|EGF84797.1| small GTP-binding domain protein [Chlamydophila psittaci Cal10]
gi|328915100|gb|AEB55933.1| GTP-binding protein engA [Chlamydophila psittaci 6BC]
gi|334692727|gb|AEG85946.1| ribosome-associated GTPase [Chlamydophila psittaci C19/98]
gi|334693703|gb|AEG86921.1| ribosome-associated GTPase [Chlamydophila psittaci 01DC11]
gi|334694682|gb|AEG87899.1| ribosome-associated GTPase [Chlamydophila psittaci 02DC15]
gi|334695656|gb|AEG88872.1| ribosome-associated GTPase [Chlamydophila psittaci 08DC60]
gi|405781254|gb|AFS20004.1| small GTP-binding domain protein [Chlamydia psittaci 84/55]
gi|405786836|gb|AFS25580.1| small GTP-binding domain protein [Chlamydia psittaci WC]
gi|449040075|gb|AGE75499.1| GTP-binding protein EngA [Chlamydophila psittaci Mat116]
Length = 474
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL + R + D + TT + + +S +
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNIPGTTRDNIDILYS------------Y 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQ 505
L + KK + ++NK DL Q
Sbjct: 312 KRILSLISKQKKPHIILVNKWDLIQ 336
>gi|296132245|ref|YP_003639492.1| phosphomethylpyrimidine kinase [Thermincola potens JR]
gi|296030823|gb|ADG81591.1| phosphomethylpyrimidine kinase [Thermincola potens JR]
Length = 492
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Query: 103 DLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVK-DRALFLIAERVDIAAAVNASG 161
+++ +A+A GI+ L + + + + E L+ + + + ALF++ +R+D+A AV+A G
Sbjct: 306 EVVSQALAGGAGIIQLREKKWTTRQLVEVGRELQRLARENNALFIVNDRIDVALAVDADG 365
Query: 162 VLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFLVCCFGEGQ 221
V L +P +AR + M ++G + +T++ A A EGAD++ FG
Sbjct: 366 VHLGQDDMPVRMARRVIGPDM-------ILGISAETVEEALTA-EKEGADYI--GFGPVF 415
Query: 222 KADVIENS-------LFTNVK----IPIFIMNASPLVDVSKFLKSGASGF-----VISLE 265
D ++ L VK IP++ + L + ++ L +G G V+ +
Sbjct: 416 HTDTKPDAGTARGLELLAQVKKAVSIPVYGIGGIKLDNAAEVLSAGVDGVAVITAVVGAD 475
Query: 266 DLSL 269
D++L
Sbjct: 476 DITL 479
>gi|296124365|ref|YP_003632143.1| GTP-binding protein HSR1-like protein [Planctomyces limnophilus DSM
3776]
gi|296016705|gb|ADG69944.1| GTP-binding protein HSR1-related protein [Planctomyces limnophilus
DSM 3776]
Length = 840
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 54/269 (20%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
L +VG+ +GKSS+INA+L ++ V+P T+ + +Y
Sbjct: 590 LAVVGQVKAGKSSLINAILRQQAAFVDVLPATSGV---------------------AEYH 628
Query: 427 CYLPSPILKEMIIVDTPG-TNVILQ-RQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
C LP E++++DTPG T+ L RQ E +A++VL V++A+ P + +V +
Sbjct: 629 CLLPMSA-GEVVLLDTPGYTDATLSPRQFAAILEAARQAEVVLLVMAANNPAKDPDVQLM 687
Query: 485 RYTQQWKKK--------VVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
Q++ ++ +V V++K DL + E F LN + VS
Sbjct: 688 HRLQEYFQQHPQERPPLLVGVISKVDLLRPTLEWSPPYQF--------LNPAATSAKEVS 739
Query: 537 ARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLYSFLDGSSSTGKERMRL-K 595
R ++ V HS + HW + +LE + G+ T + +
Sbjct: 740 VREVVQYHQEVF------HSTI----RHW-VPVATRLEARTTTLESGTPETPNRLYGIDE 788
Query: 596 LETPIRIAERLLSSCETLVMKDCQDAKQD 624
P+ IA+ L + L++ + A+QD
Sbjct: 789 YLIPLLIAQ--LPEAQGLLLLNAHHARQD 815
>gi|448622973|ref|ZP_21669622.1| thiamine-phosphate pyrophosphorylase [Haloferax denitrificans ATCC
35960]
gi|445753481|gb|EMA04898.1| thiamine-phosphate pyrophosphorylase [Haloferax denitrificans ATCC
35960]
Length = 214
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
AG D++ AV V +V L AS + Y +++V D + L+ +RVDIAA
Sbjct: 17 AGRSTPDVVRAAVDGGVDVVQLREKHASARDRYAVGREVRAVTADAGVPLVVNDRVDIAA 76
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + D +VGR+V T+
Sbjct: 77 AIDADGVHLGDDDVPVSVAREQLGDD-------AVVGRSVSTV 112
>gi|427721151|ref|YP_007069145.1| small GTP-binding protein [Calothrix sp. PCC 7507]
gi|427353587|gb|AFY36311.1| small GTP-binding protein [Calothrix sp. PCC 7507]
Length = 524
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 26/143 (18%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+V+ G ++GK+S++NA++G+ + T ++ G+
Sbjct: 134 VVVFGTGSAGKTSLVNAVMGRMVGQVDAPMGTTQV---------------------GETY 172
Query: 427 CYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVF 483
C + ++++I DTPG V +++L ADL+LFV+ D L SE
Sbjct: 173 CLRLKGLERKILITDTPGILEAGVAGTEREQLARALATEADLLLFVV--DNDLRRSEYEP 230
Query: 484 LRYTQQWKKKVVFVLNKSDLYQN 506
LR + K+ + VLNK+DLY +
Sbjct: 231 LRGLAEIGKRSLLVLNKTDLYTD 253
>gi|399523858|ref|ZP_10764459.1| 50S ribosome-binding GTPase [Atopobium sp. ICM58]
gi|398375120|gb|EJN52584.1| 50S ribosome-binding GTPase [Atopobium sp. ICM58]
Length = 550
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 353 LLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVV-PTTNEITFL-----RF 406
L++ + D P L+V+ G SGKS+++N+LL + + G V PTT + R
Sbjct: 41 LVLPRLEDADAPLLVVVGGSTGSGKSTLVNSLLDRNVSRSGAVRPTTRRPVVVCSPAARA 100
Query: 407 SDLASEEQQRCERHPDG------QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFV 460
++ R +H G + + + I+D P + + + +RL E +
Sbjct: 101 WFMSDRVLPRLAKHEGGAGTSLDAVTVTVDDMMWPSIGILDAPDIDSVEEGNRRLASELL 160
Query: 461 PRADLVLFVISADRPLTESEVVFLRYTQQWKK---KVVFVLNK 500
ADL +FV SA R ++ V R+ ++ + +V VLN+
Sbjct: 161 DGADLWIFVTSAAR---YADAVAWRHLEEAAERGLRVAIVLNR 200
>gi|378716137|ref|YP_005281026.1| putative isoniazid inducible protein IniA [Gordonia
polyisoprenivorans VH2]
gi|375750840|gb|AFA71660.1| putative isoniazid inducible protein IniA [Gordonia
polyisoprenivorans VH2]
Length = 638
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 35/208 (16%)
Query: 339 DVIKKASPLMEEV------SLLIDAVSQIDEPFL-LVIVGEYNSGKSSVINALLGKRYLK 391
D+I +A+ L + + L A +++ +P L +V+VG GKS +NALL
Sbjct: 45 DLIARAATLAAQTQRDDLTARLQGAHARLSDPRLRIVVVGNLKQGKSQFVNALLNLGVCA 104
Query: 392 DG-----VVPT----------------TNEITFLRFSDLASEEQQRCERHPDGQYICYL- 429
G VPT T++ + F ++ S H G+ + L
Sbjct: 105 VGDDESTAVPTLISHAEQPAAHLVVAGTDQPIPIPFDEVTSVTPTSA--HTQGREVMRLE 162
Query: 430 ---PSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
P P+L + ++++DTPG T V AD V V A + T E+ FLR
Sbjct: 163 ITAPGPLLADGLVVIDTPGVGGHGHPYAATTLGMVAAADAVFMVTDASQEFTAPEMAFLR 222
Query: 486 YTQQWKKKVVFVLNKSDLYQNAFELEEA 513
V + K+DLY + + +A
Sbjct: 223 QVVDLCPTVACLFTKTDLYPHWRRIADA 250
>gi|326391003|ref|ZP_08212552.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter
ethanolicus JW 200]
gi|392940430|ref|ZP_10306074.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter
siderophilus SR4]
gi|325992948|gb|EGD51391.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter
ethanolicus JW 200]
gi|392292180|gb|EIW00624.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter
siderophilus SR4]
Length = 213
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 100 DALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVK-DRALFLIAERVDIAAAVN 158
D D ++ A+ ++ L + S + YE A +K V K +R +I +RVDIA AV+
Sbjct: 18 DIADAVELAIKGGATVIQLREKDISSREFYEIALKVKEVTKRNRIPLIINDRVDIALAVD 77
Query: 159 ASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
A GV + + LPA V R + +VG + +T++ A A +GAD+L
Sbjct: 78 ADGVHVGQEDLPADVVRKVIGHD-------KIVGVSARTVEEALKA-QRDGADYL 124
>gi|407457180|ref|YP_006735753.1| GTP-binding domain-containing protein [Chlamydia psittaci VS225]
gi|405784441|gb|AFS23188.1| small GTP-binding domain protein [Chlamydia psittaci VS225]
Length = 474
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL + R + D + TT + + +S +
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNIPGTTRDNIDILYS------------Y 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQ 505
L + KK + ++NK DL Q
Sbjct: 312 KRILSLISKQKKPHIILVNKWDLIQ 336
>gi|154505327|ref|ZP_02042065.1| hypothetical protein RUMGNA_02842 [Ruminococcus gnavus ATCC 29149]
gi|336432254|ref|ZP_08612090.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794370|gb|EDN76790.1| ribosome biogenesis GTPase Der [Ruminococcus gnavus ATCC 29149]
gi|336019194|gb|EGN48925.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_58FAA]
Length = 450
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 44/155 (28%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCE--- 418
DE + IVG+ N GKSS++N LLG+ N + SD+A + +
Sbjct: 183 DERPKIAIVGKPNVGKSSIVNKLLGE-----------NRVIV---SDIAGTTRDAIDTAI 228
Query: 419 RHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF-----------VPRADLVL 467
+H D +YI +DT G L+R+ ++ EE V RAD+VL
Sbjct: 229 KHEDREYI------------FIDTAG----LRRKNKIKEELERFSIIRTVTAVERADVVL 272
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSD 502
VI A +TE + + K V+ V+NK D
Sbjct: 273 MVIDATEGVTEQDAKIAGIAHERGKGVIIVVNKWD 307
>gi|89897898|ref|YP_515008.1| GTP-binding protein EngA [Chlamydophila felis Fe/C-56]
gi|123483923|sp|Q256C5.1|DER_CHLFF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89331270|dbj|BAE80863.1| GTP-binding GTPase [Chlamydophila felis Fe/C-56]
Length = 475
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 349 EEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRYLKDGVVPTTNEITFLRFS 407
EE +L D+P + ++G N GKSS+IN LL +R + D + TT + + +S
Sbjct: 197 EEEEILFSKPPASDKPLKIALIGRPNVGKSSIINGLLNEERCIIDNIPGTTRDNVDILYS 256
Query: 408 DLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVL 467
H D Y+ ++ + L++M V N I TE+ + RAD+ L
Sbjct: 257 ------------HNDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICL 299
Query: 468 FVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL 503
VI A L+ + L + KK + + NK DL
Sbjct: 300 LVIDATHCLSSYDKRILSLISKHKKPHIILANKWDL 335
>gi|118477119|ref|YP_894270.1| GTP1/OBG family GTPase [Bacillus thuringiensis str. Al Hakam]
gi|376265514|ref|YP_005118226.1| hypothetical protein bcf_07955 [Bacillus cereus F837/76]
gi|118416344|gb|ABK84763.1| possible GTPase, GTP1/OBG family [Bacillus thuringiensis str. Al
Hakam]
gi|364511314|gb|AEW54713.1| Hypothetical protein bcf_07955 [Bacillus cereus F837/76]
Length = 1219
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + SD
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGSDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
>gi|229172309|ref|ZP_04299871.1| Reticulocyte binding protein [Bacillus cereus MM3]
gi|228611166|gb|EEK68426.1| Reticulocyte binding protein [Bacillus cereus MM3]
Length = 1219
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + R + E L+
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHTHNEIGSLETLITSIMKEKVQYVRDGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I L+
Sbjct: 281 FSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEAKQREASKESHVRNEFIKGLQ 338
>gi|406946302|gb|EKD77553.1| hypothetical protein ACD_42C00297G0003 [uncultured bacterium]
Length = 296
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 35/182 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ I+G+ N GKS+++N +LGK+ P T T R S + + E
Sbjct: 8 VAIIGKPNVGKSTLMNTILGKKISITSRKPQT---TRHRISGIKTTESS----------- 53
Query: 427 CYLPSPILKEMIIVDTPGTNVILQRQ-----QRLTEEFVPRADLVLFVISADRPLTESEV 481
+MI VDTPG + +++ R+ + D++LF+I A R +
Sbjct: 54 ---------QMIFVDTPGLHQEQKKEINRVMNRVARTVLGEVDVILFLIEAMR-WDNDDA 103
Query: 482 VFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
LR + K V+ V+NK D +N EL + F+ EN K E I PVSA++ L
Sbjct: 104 SVLRQLKSTKLPVILVINKIDEIKNKMEL---LPFI-ENLSK--QFEFKKIVPVSAKTGL 157
Query: 542 EA 543
+
Sbjct: 158 QV 159
>gi|428775888|ref|YP_007167675.1| GTP-binding protein HSR1-like protein [Halothece sp. PCC 7418]
gi|428690167|gb|AFZ43461.1| GTP-binding protein HSR1-related protein [Halothece sp. PCC 7418]
Length = 485
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 9/187 (4%)
Query: 324 KQLIETERSVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFL-LVIVGEYNSGKSSVI 381
KQ ++ RS L++ ID+ ++ S L E++ L + ++++ + + G GKSSV+
Sbjct: 36 KQAQDSLRS-LVQQIDLTAEEKSGLESEINYLTAMLDKLEQSVVQIAAFGMVGRGKSSVL 94
Query: 382 NALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVD 441
NALLG+ + G P + ++ E+ D + LPS + ++D
Sbjct: 95 NALLGENVFQTG--PLHGVTRTIGSANWELTEESLGNSDQDILRVS-LPSRQQASIQLID 151
Query: 442 TPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNK 500
TPG + V + ++ + + +ADL+LF+I+ D +T+ E L ++ K ++ V NK
Sbjct: 152 TPGIDEVDGETRELMAHQIAKQADLILFIIAGD--ITKVEYNALSRLREVGKPMLLVFNK 209
Query: 501 SDLYQNA 507
D Y A
Sbjct: 210 IDQYPEA 216
>gi|418529119|ref|ZP_13095059.1| hypothetical protein CTATCC11996_05503 [Comamonas testosteroni ATCC
11996]
gi|371453545|gb|EHN66557.1| hypothetical protein CTATCC11996_05503 [Comamonas testosteroni ATCC
11996]
Length = 665
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 36/159 (22%)
Query: 426 ICYLPSPILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ +P P+LK+ ++I+DTPG N + + LT +P+A V+FV+ AD +T+S++
Sbjct: 196 LINMPHPLLKQGLVILDTPGLNAV-GAEPELTVNLIPQAHAVVFVLGADTGVTKSDLAI- 253
Query: 485 RYTQQWKKKV------------------VFVLNKSDLYQNAF----ELEEAISFVKENTM 522
W+ V + VLNK D ++ ++ + ++++
Sbjct: 254 -----WRDHVLPAGAGKVGDDDALAASRLVVLNKVDTLWDSLSSGAQVHAQLRRQQQDSA 308
Query: 523 KLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVN 561
+LL + + P+SA+ L AK VG++ S L +
Sbjct: 309 QLLGVALERVLPISAQKGLVAK------VGRNDSLLQAS 341
>gi|448546164|ref|ZP_21626416.1| thiamine-phosphate pyrophosphorylase [Haloferax sp. ATCC BAA-646]
gi|448548163|ref|ZP_21627507.1| thiamine-phosphate pyrophosphorylase [Haloferax sp. ATCC BAA-645]
gi|448557268|ref|ZP_21632621.1| thiamine-phosphate pyrophosphorylase [Haloferax sp. ATCC BAA-644]
gi|445703007|gb|ELZ54943.1| thiamine-phosphate pyrophosphorylase [Haloferax sp. ATCC BAA-646]
gi|445714570|gb|ELZ66330.1| thiamine-phosphate pyrophosphorylase [Haloferax sp. ATCC BAA-644]
gi|445714865|gb|ELZ66623.1| thiamine-phosphate pyrophosphorylase [Haloferax sp. ATCC BAA-645]
Length = 210
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 97 AGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAA 155
G D++ AV V +V L AS + YE +++V D + L+ +RVDIAA
Sbjct: 13 GGRSTPDVVRAAVDGGVDVVQLREKHASARDRYEVGREVRAVTADAGVPLVVNDRVDIAA 72
Query: 156 AVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTL 198
A++A GV L D +P VAR + + +VGR+V T+
Sbjct: 73 AIDADGVHLGDDDVPVSVAREQLGEG-------AIVGRSVSTV 108
>gi|22298833|ref|NP_682080.1| hypothetical protein tlr1290 [Thermosynechococcus elongatus BP-1]
gi|22295014|dbj|BAC08842.1| tlr1290 [Thermosynechococcus elongatus BP-1]
Length = 462
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
+ + G GKSS++NALLG+ Y G + + EE + + Q
Sbjct: 75 IAVFGMVGRGKSSLLNALLGEPYFATGPIHGVTQ-----------EEASALWQISEAQR- 122
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
+PI ++DTPG + V +++L + +ADL+LFVI+ D LT E L
Sbjct: 123 ---GNPIR----LIDTPGLDEVNGAAREQLARQVAAQADLILFVIAGD--LTRLEYQALS 173
Query: 486 YTQQWKKKVVFVLNKSDLYQNA 507
+Q K ++ V NK D Y A
Sbjct: 174 ELRQAGKPMILVFNKVDQYPEA 195
>gi|423504736|ref|ZP_17481327.1| hypothetical protein IG1_02301 [Bacillus cereus HD73]
gi|449088461|ref|YP_007420902.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|402455258|gb|EJV87041.1| hypothetical protein IG1_02301 [Bacillus cereus HD73]
gi|449022218|gb|AGE77381.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 1219
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEIATLDEALAQIDN------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 221 SFSNWDIEVDEVYYTSLRMMNHPHNEIGSLETLITSIMKEKERYVREGMERETEYLMGEH 280
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E + E + K ++A ++ + NE I L+
Sbjct: 281 FSFILSENEKALLKYEKELASPLSISEIVEKKAELMETKR-REASKESHVRNEFIKGLQ 338
>gi|409395773|ref|ZP_11246834.1| GTPase [Pseudomonas sp. Chol1]
gi|409119710|gb|EKM96086.1| GTPase [Pseudomonas sp. Chol1]
Length = 655
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Query: 432 PILKE-MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV-VFLRYTQQ 489
P+L++ + I+DTPG N L + LT +P A VLF++SAD +T S++ ++ R+ Q
Sbjct: 200 PLLRQGLRILDTPGLNA-LGSEPELTLSMLPNAQAVLFMLSADAGVTASDMDIWRRHVCQ 258
Query: 490 W----KKKVVFVLNKSDLYQN--AFE--LEEAISFVKENTMKLLNIENVTIYPVSARSTL 541
+ + VLNK D+ + A E + EAI ++ +T + L I++ + P+SA+ L
Sbjct: 259 LDSDTRGNLFAVLNKIDVLWDDPAGEEFVSEAIRQMRASTAQQLGIDSAQVLPLSAKQAL 318
Query: 542 EAKLSVSSAV 551
K+ A+
Sbjct: 319 LGKVRGDQAL 328
>gi|406594619|ref|YP_006742088.1| GTP-binding domain-containing protein [Chlamydia psittaci MN]
gi|410858851|ref|YP_006974791.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
gi|405783051|gb|AFS21799.1| small GTP-binding domain protein [Chlamydia psittaci MN]
gi|410811746|emb|CCO02401.1| putative GTP-binding protein [Chlamydia psittaci 01DC12]
Length = 474
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
D+P + ++G N GKSS+INALL + R + D + TT + + +S +
Sbjct: 209 DKPLKIALIGRPNVGKSSIINALLNEERCIIDNIPGTTRDNIDILYS------------Y 256
Query: 421 PDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
D Y+ ++ + L++M V N I TE+ + RAD+ L VI A L+ +
Sbjct: 257 NDRSYL-FIDTAGLRKMKSV----KNSIEWISSSRTEKAIARADICLLVIDATHHLSSYD 311
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQ 505
L + KK + ++NK DL Q
Sbjct: 312 KRILSLISKQKKPHIILVNKWDLIQ 336
>gi|423618183|ref|ZP_17594017.1| hypothetical protein IIO_03509 [Bacillus cereus VD115]
gi|401253914|gb|EJR60150.1| hypothetical protein IIO_03509 [Bacillus cereus VD115]
Length = 1219
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALL---GK 387
+ LLE + + K E++ L +A++QID+ V+ SGK + L K
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK----VMKYPLPSGKQKTTFSFLRAVQK 733
Query: 388 RYLKDGVVPTTNE---ITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVDTP 443
Y D V E +T F+D + E++ C + + Y C L + + +VDTP
Sbjct: 734 GY--DAVSAHLGEQVQVTLEEFADYVANEEKSCFVEYMELYYDCALTR---QGVALVDTP 788
Query: 444 GTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVL 498
G + I R + +++ AD +LFV + + ++ FL + K K+ F++
Sbjct: 789 GADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFFLI 848
Query: 499 NKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 849 NAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----------------- 405
E ++ G +++GKS+++N L ++ L +PT+ + +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKEQLLPTSPIPTSANVVKIEKGLDRVVVTVKSGEQYE 101
Query: 406 ----FSDLASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
+S A E +Q C+ + G +I +PI + +++VDTPG + Q TE
Sbjct: 102 YDGAYS--AEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATEST 159
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVK- 518
+ AD++ +++ + +E + F++ +Q K V V+N+ D ++ E +SFV
Sbjct: 160 LHLADIIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHK-----ENELSFVNY 214
Query: 519 ----ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ + +IE +Y S R + + S + + + R + E
Sbjct: 215 KDSVKQSFSNWDIEVDGVYYTSLRMMNHPHNEIGNLESLISSIMEEKEQYVRTGMERETE 274
Query: 575 KLL---YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEM 631
LL +SF+ + + +L +P+ I E ++ E L ++A ++ + NE
Sbjct: 275 YLLGEHFSFILSENEKDLLKYEEELASPLSILE-VVEKKEELTETKKREASKESHVKNEF 333
Query: 632 IDSLK 636
I L+
Sbjct: 334 IKGLQ 338
>gi|229195873|ref|ZP_04322632.1| Reticulocyte binding protein [Bacillus cereus m1293]
gi|228587646|gb|EEK45705.1| Reticulocyte binding protein [Bacillus cereus m1293]
Length = 1210
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYSDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 212 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMVRETEYLMGE 270
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 271 H--FSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 327
Query: 635 LK 636
L+
Sbjct: 328 LQ 329
>gi|15893786|ref|NP_347135.1| thiamine monophosphate syntase [Clostridium acetobutylicum ATCC
824]
gi|337735709|ref|YP_004635156.1| thiamine monophosphate syntase [Clostridium acetobutylicum DSM
1731]
gi|384457220|ref|YP_005669640.1| Thiamine monophosphate syntase [Clostridium acetobutylicum EA 2018]
gi|24212505|sp|Q97LQ9.1|THIE_CLOAB RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|15023356|gb|AAK78475.1|AE007564_3 Thiamine monophosphate syntase [Clostridium acetobutylicum ATCC
824]
gi|325507909|gb|ADZ19545.1| Thiamine monophosphate syntase [Clostridium acetobutylicum EA 2018]
gi|336293198|gb|AEI34332.1| thiamine monophosphate syntase [Clostridium acetobutylicum DSM
1731]
Length = 211
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 18/181 (9%)
Query: 93 HQVLAGGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERV 151
+VL D I+EA+ V +V L E S YE+A LK + + + +I +R+
Sbjct: 14 RKVLKERDLYKSIEEAIKGGVTLVQLREKEMSTLDFYESALKLKKITETYKIPLIINDRI 73
Query: 152 DIAAAVNASGVLLSDQGLPAIVARNTM-KDSMSESVVLPLVGRNVQTLDAAFNASSSE-- 208
DIA A+NA GV + +P I AR + KD ++G + +++ A A +
Sbjct: 74 DIALAINADGVHIGQSDMPLIKARELLGKD--------KIIGVSAHSIEEALEAERNGAT 125
Query: 209 ----GADFLVCCFGEGQKADVIE-NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGF-VI 262
GA + G+ Q + E ++ +VKIP+ + + +K +++G G VI
Sbjct: 126 YLGVGAIYNTSTKGDAQAVSLEELKNIKNSVKIPVVGIGGINEENANKVIETGVDGISVI 185
Query: 263 S 263
S
Sbjct: 186 S 186
>gi|406944339|gb|EKD76134.1| hypothetical protein ACD_43C00215G0001, partial [uncultured
bacterium]
Length = 364
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 57/197 (28%)
Query: 364 PFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDG 423
P + I+G+ N GKSS+ N ++G+ D V+ SDL R P+
Sbjct: 92 PIQVAIIGQPNVGKSSLFNRIIGE----DRVI----------ISDLP-----HTTRDPND 132
Query: 424 QYICYLPSPILKEMIIVDTPGTNVILQRQQRL---------------TEEFVPRADLVLF 468
+ Y + + ++DT G L+RQ RL T+E + +AD+V+
Sbjct: 133 TIVEYQG----RHINLIDTAG----LRRQNRLGHGTDKTIELLSTRGTKESIRKADVVVL 184
Query: 469 VISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDL---------------YQNAFELEEA 513
VI A R + + + Y Q+ +K V V NK DL YQ FE +
Sbjct: 185 VIEAQRKIVHQDKALISYLQKLRKSFVLVANKWDLIPDKSPTTINDFIKYYQFHFEFADH 244
Query: 514 ISFVKENTMKLLNIENV 530
I + +T+ I +V
Sbjct: 245 IPTIFTSTVDHQRIMSV 261
>gi|138895066|ref|YP_001125519.1| GTPase [Geobacillus thermodenitrificans NG80-2]
gi|134266579|gb|ABO66774.1| Putative GTPases (dynamin-related) [Geobacillus thermodenitrificans
NG80-2]
Length = 1242
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 426 ICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ Y P+ ++ + +VDTPG + + R + ++ AD +LFV + ++++ FL
Sbjct: 796 VLYADCPLTRQGVTLVDTPGVDSLNARHTGVAFHYMKHADALLFVTYYNHAFSKADREFL 855
Query: 485 RYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ K K+ F++N +DL Q+ EL+ I+++ + + I +Y +S+R
Sbjct: 856 LQLGRVKDAFALDKMFFIINAADLAQSKEELDAVIAYMNDELAR-FGIRFPRLYALSSRM 914
Query: 540 TLEAKLSVS-SAVG 552
L K+ V SA G
Sbjct: 915 ALAEKMGVEPSARG 928
>gi|209917480|ref|YP_002291564.1| hypothetical protein ECSE_0289 [Escherichia coli SE11]
gi|209910739|dbj|BAG75813.1| conserved hypothetical protein [Escherichia coli SE11]
Length = 291
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 29/152 (19%)
Query: 369 IVGEYNSGKSSVINALL-GKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYIC 427
I+G+ +GKSS+ N L G+ V T ++ LRF + R RH
Sbjct: 41 IMGKSGTGKSSLCNELFRGEVSRVSDVNACTRDV--LRF-------RLRSGRH------- 84
Query: 428 YLPSPILKEMIIVDTPGTNVILQRQQR---LTEEFVPRADLVLFVISAD-RPLTESEVVF 483
++IVD PG +R Q L +P DLVL+VI AD R LT E +
Sbjct: 85 --------SLVIVDLPGVGENGRRDQEYRALYRRILPELDLVLWVIKADDRALTVDEQSW 136
Query: 484 LRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
Q +++KV+FV+N++D + E + S
Sbjct: 137 HGVMQPYRQKVLFVINQADKIEPCHEWDTLTS 168
>gi|434396771|ref|YP_007130775.1| GTP-binding protein HSR1-related protein [Stanieria cyanosphaera
PCC 7437]
gi|428267868|gb|AFZ33809.1| GTP-binding protein HSR1-related protein [Stanieria cyanosphaera
PCC 7437]
Length = 486
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 371 GEYNSGKSSVINALLGKRYLKDG-VVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYL 429
G GKSSV+NALLG+ G + TN+I + L E+ E + +
Sbjct: 78 GMVGRGKSSVLNALLGQEIFTAGPLHGVTNKINSANW-QLTPEKLGNTEENLQ---TLTI 133
Query: 430 PSPILKEMI-IVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYT 487
+ I K I ++DTPG + V + ++ L + + DL+LFVI+ D LT+ E L
Sbjct: 134 STGIGKSKIQLIDTPGIDEVNGEVREALACDLAKQVDLILFVIAGD--LTQVEYNALSRL 191
Query: 488 QQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIY---PVSARSTLEA- 543
++ K ++ V NK D Y A L E +LL+ E + + P+ A++ +A
Sbjct: 192 REAGKPILLVFNKIDQYPEADRLAIYHKIRDERVKQLLSPEEIVMVAASPLQAQAIRQAD 251
Query: 544 -KLSVSSAVGK 553
KL V G+
Sbjct: 252 GKLKVQRQRGQ 262
>gi|71422100|ref|XP_812028.1| sarcoplasmic reticulum glycoprotein [Trypanosoma cruzi strain CL
Brener]
gi|70876759|gb|EAN90177.1| sarcoplasmic reticulum glycoprotein, putative [Trypanosoma cruzi]
Length = 533
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD---------LASEE 413
+PF+ G ++SGKS+ IN LL YL G PTT E T + + + LAS +
Sbjct: 60 KPFV-TFFGPWSSGKSTFINHLLQDNYLWTGPQPTTAEFTVVLYGEEVGPVSGHVLASAK 118
Query: 414 QQRCERHPD------GQYICY-LPSPILKEMIIVDTPG----TNVILQRQ---QRLTEEF 459
+ + G++ Y +P +LK + ++DTPG I +RQ +++ F
Sbjct: 119 NLPFKGLTEFGESFLGKFQGYRVPHELLKRVTLIDTPGILESVKDIRERQFDYVKVSRWF 178
Query: 460 VPRADLVLFVISADR--PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
R+DL+ + + E +++F + + KV VLNK+D N EL +
Sbjct: 179 AERSDLIFILFDPSKLDAGIELKMMFKHAFRGMEGKVRIVLNKADSI-NTQELMRVYGSI 237
Query: 518 KENTMKLLN 526
N L+N
Sbjct: 238 FWNLSNLIN 246
>gi|228952049|ref|ZP_04114144.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228807581|gb|EEM54105.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 1210
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID V +Y S GK + L R
Sbjct: 671 KQALLEDMKAVYKL--FHYEIATLDEALAQIDN------VMKYPSPTGKQKTTFSFL--R 720
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 721 AVQKGYDAVSTYLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 777
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 778 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 837
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 838 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 884
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 130/299 (43%), Gaps = 27/299 (9%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 33 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 92
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 93 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 152
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E VK+
Sbjct: 153 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFENYKDSVKQ- 211
Query: 521 TMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLL--- 577
+ +IE +Y S R + S S + + + R + E L+
Sbjct: 212 SFSNWDIEVDEVYYTSLRMMNHPHNEIGSLETLITSIMKEKERYVREGMERETEYLMGEH 271
Query: 578 YSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDSLK 636
+SF+ + + +L +P+ I+E + E + K ++A ++ + NE I L+
Sbjct: 272 FSFILSENEKALLKYEKELASPLSISEIVEKKAELMETKR-REASKESHVRNEFIKGLQ 329
>gi|357056596|ref|ZP_09117635.1| tRNA modification GTPase TrmE [Clostridium clostridioforme
2_1_49FAA]
gi|355379961|gb|EHG27108.1| tRNA modification GTPase TrmE [Clostridium clostridioforme
2_1_49FAA]
Length = 459
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 117/273 (42%), Gaps = 74/273 (27%)
Query: 336 EAIDVIKKASPLMEEVSLLIDAVSQI-----DEPFL-----LVIVGEYNSGKSSVINALL 385
E I + S LM+ ++ +ID ++ D F+ VI+G+ N+GKSS++N LL
Sbjct: 184 EHISLDGYGSQLMDALAPMIDEARKLLLSADDGRFMSEGVKTVILGKPNAGKSSLMNVLL 243
Query: 386 G-KRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPG 444
G +R + V TT + E H YL L +VDT G
Sbjct: 244 GEERAIVTEVAGTTRDT---------------LEEH------IYLQGISLN---VVDTAG 279
Query: 445 TNVILQRQQRLTEEFVPR------------ADLVLFVISADRPLTESEVVFLRYTQQWKK 492
R TE+ V + ADL+++V+ RPL ES+ + + + +
Sbjct: 280 I--------RDTEDVVEKIGVDRALKAARDADLIIYVVDGSRPLDESDREIMDFIR--GR 329
Query: 493 KVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVG 552
K + +LNKSDL +LE T +L + + PVSA+ +L + +
Sbjct: 330 KTIVLLNKSDL-----DLEVG-------TEELEQLCGHKVIPVSAKEEQGIEL-LEQEIK 376
Query: 553 K--DHSELSVNDSHWRINTFDK--LEKLLYSFL 581
K H +LS ND + N K LE+ L S L
Sbjct: 377 KLFYHGDLSFNDQVYITNARHKEALEQCLESLL 409
>gi|196248358|ref|ZP_03147059.1| Dynamin family protein [Geobacillus sp. G11MC16]
gi|196212083|gb|EDY06841.1| Dynamin family protein [Geobacillus sp. G11MC16]
Length = 1242
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 426 ICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ Y P+ ++ + +VDTPG + + R + ++ AD +LFV + ++++ FL
Sbjct: 796 VLYADCPLTRQGVTLVDTPGVDSLNARHTGVAFHYMKHADALLFVTYYNHAFSKADREFL 855
Query: 485 RYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARS 539
+ K K+ F++N +DL Q+ EL+ I+++ + + I +Y +S+R
Sbjct: 856 LQLGRVKDAFALDKMFFIINAADLAQSKEELDAVIAYMNDELAR-FGIRFPRLYALSSRM 914
Query: 540 TLEAKLSVS-SAVG 552
L K+ V SA G
Sbjct: 915 ALAEKMGVEPSARG 928
>gi|124023639|ref|YP_001017946.1| thiamine-phosphate pyrophosphorylase [Prochlorococcus marinus str.
MIT 9303]
gi|166228780|sp|A2CB21.1|THIE_PROM3 RecName: Full=Thiamine-phosphate synthase; Short=TP synthase;
Short=TPS; AltName: Full=Thiamine-phosphate
pyrophosphorylase; Short=TMP pyrophosphorylase;
Short=TMP-PPase
gi|123963925|gb|ABM78681.1| Thiamine monophosphate synthase (TMP) [Prochlorococcus marinus str.
MIT 9303]
Length = 353
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 74 GGYKRPEIKVPNVVLQLEPHQVLAGGDALDLIDEAVAKFVGIVVLNGGEASG-KSVYEAA 132
G +R +++ ++ L LA D + A+ + +V EAS + + +A
Sbjct: 142 GKKRRQQLQACHLCLITTSQSDLANNDLFRTVSAALVAGIDMVQYRNKEASDLQRLTQAK 201
Query: 133 CLLKSVVKDRALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVG 192
L K ALF++ +R+D+A AV+A GV L LP VAR + L+G
Sbjct: 202 ELASLCRKHGALFIVNDRIDLALAVDADGVHLGQDDLPTDVARGLIGSER-------LLG 254
Query: 193 RNVQTLDAAFNASSSEGADFL 213
R+ Q L A + +EG D+L
Sbjct: 255 RSTQFL-AQLQKAEAEGCDYL 274
>gi|423576614|ref|ZP_17552733.1| hypothetical protein II9_03835 [Bacillus cereus MSX-D12]
gi|401207610|gb|EJR14389.1| hypothetical protein II9_03835 [Bacillus cereus MSX-D12]
Length = 1219
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYSDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMKHPHNEIENLETLITSIMKE-KEQYVRDGMVRETEYLMGE 279
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 280 H--FSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
>gi|375084641|ref|ZP_09731501.1| ribosome-associated GTPase EngA [Megamonas funiformis YIT 11815]
gi|374567888|gb|EHR39086.1| ribosome-associated GTPase EngA [Megamonas funiformis YIT 11815]
Length = 444
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ ++G N GKSS++NALLG+ R + V TT + +F D +
Sbjct: 181 IAVIGRPNVGKSSLVNALLGQERVIVSDVAGTTRDAIDTKFDD-------------GNTH 227
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
+ + ++ +D P + R R V RAD+VL VISA +TE +
Sbjct: 228 FTLIDTAGMRRKGKIDMPIERYSVMRSLRA----VDRADVVLMVISAPEGVTEQDKKIAG 283
Query: 486 YTQQWKKKVVFVLNKSDLYQ 505
Y + K + V+NK DL +
Sbjct: 284 YAHESGKGCIIVVNKWDLIE 303
>gi|228984750|ref|ZP_04144922.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228774948|gb|EEM23342.1| Reticulocyte binding protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 1219
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVKIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEYLMGE 279
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 280 H--FSFILSENEKSLLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
>gi|428299767|ref|YP_007138073.1| small GTP-binding protein [Calothrix sp. PCC 6303]
gi|428236311|gb|AFZ02101.1| small GTP-binding protein [Calothrix sp. PCC 6303]
Length = 516
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK-DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+V+ G ++GK+S++NA++G+ + D + TT G+
Sbjct: 133 VVVFGTGSAGKTSLVNAVMGRMVGRVDAPMGTTTV----------------------GET 170
Query: 426 ICYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
C + ++++I DTPG V +++L E A+L+LFV+ D L SE
Sbjct: 171 YCLRLKGLERKILITDTPGILEAGVAGTEREQLARELATEANLLLFVV--DNDLRRSEYE 228
Query: 483 FLRYTQQWKKKVVFVLNKSDLY 504
L+ Q K+ + VLNK+DLY
Sbjct: 229 PLQSLAQIGKRSLLVLNKTDLY 250
>gi|282163806|ref|YP_003356191.1| thiamine-phosphate pyrophosphorylase [Methanocella paludicola
SANAE]
gi|282156120|dbj|BAI61208.1| thiamine-phosphate pyrophosphorylase [Methanocella paludicola
SANAE]
Length = 215
Score = 50.1 bits (118), Expect = 0.007, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 102 LDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAAVNAS 160
+++ A+A ++ L SG+ + E A ++++ K+ LF++ +R+DIA A A
Sbjct: 21 VEIARRAIAGGADVIQLRDKSMSGEELMECAVQIRTLTKEAGVLFIVNDRLDIAIASKAD 80
Query: 161 GVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL----VCC 216
GV L + +P +AR ++G + TL+ A A +GAD++ +C
Sbjct: 81 GVHLGQEDIPVKLARPLAPPGF-------IIGVSAGTLEEALQA-ERDGADYIGLGPICH 132
Query: 217 FGEGQKAD-VIENSLFTNVK----IPIFIMNASPLVDVSKFLKSGASGF-----VISLED 266
G + A V L T VK IP+ ++ + + + +GA G V+S +D
Sbjct: 133 TGSKKDAGPVCGFGLITGVKKHVSIPVIVIGGIGPDNAKESISAGADGLAVISAVVSQDD 192
Query: 267 LS 268
++
Sbjct: 193 VT 194
>gi|71664956|ref|XP_819453.1| sarcoplasmic reticulum glycoprotein [Trypanosoma cruzi strain CL
Brener]
gi|70884755|gb|EAN97602.1| sarcoplasmic reticulum glycoprotein, putative [Trypanosoma cruzi]
Length = 610
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD---------LASEE 413
+PF+ G ++SGKS+ IN LL YL G PTT E T + + + LAS +
Sbjct: 136 KPFV-TFFGPWSSGKSTFINHLLQDNYLWTGPQPTTAEFTVVLYGEEVGPVSGHVLASAK 194
Query: 414 QQRCERHPD------GQYICY-LPSPILKEMIIVDTPG----TNVILQRQ---QRLTEEF 459
+ + G++ Y +P +LK + ++DTPG I +RQ +++ F
Sbjct: 195 NLPFKGLTEFGESFLGKFQGYRVPHELLKRVTLIDTPGILESVKDIRERQFDYVKVSRWF 254
Query: 460 VPRADLVLFVISADR--PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
R+DL+ + + E +++F + + KV VLNK+D N EL +
Sbjct: 255 AERSDLIFILFDPSKLDAGIELKMMFKHAFRGMEGKVRIVLNKADSI-NTQELMRVYGSI 313
Query: 518 KENTMKLLN 526
N L+N
Sbjct: 314 FWNLSNLIN 322
>gi|331702513|ref|YP_004399472.1| thiamine-phosphate pyrophosphorylase [Lactobacillus buchneri NRRL
B-30929]
gi|329129856|gb|AEB74409.1| Thiamine-phosphate pyrophosphorylase [Lactobacillus buchneri NRRL
B-30929]
Length = 210
Score = 50.1 bits (118), Expect = 0.007, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 105 IDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVV-KDRALFLIAERVDIAAAVNASGVL 163
I+ V VG+V L E S + ++E A +K++ + + +I +R+DIA AV+A+GV
Sbjct: 26 IEAGVQNGVGLVQLRQKEGSSREIFELALKVKAITDRYKIPLIIDDRLDIAQAVDAAGVH 85
Query: 164 LSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
L LP +AR + ++G +TL A A+ GAD+L
Sbjct: 86 LGQSDLPVDIARRILGPK-------KIIGATAKTLKQA-KAAEEMGADYL 127
>gi|427728796|ref|YP_007075033.1| small GTP-binding protein domain-containing protein [Nostoc sp. PCC
7524]
gi|427364715|gb|AFY47436.1| small GTP-binding protein domain protein [Nostoc sp. PCC 7524]
Length = 517
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 28/144 (19%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLK-DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+V+ G ++GK+S++NA++G+ + D + TT G+
Sbjct: 134 VVVFGTGSAGKTSLVNAIMGRMVGRVDAPMGTTTA----------------------GET 171
Query: 426 ICYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
C + ++++I DTPG V +++L ADL+LFV+ D L SE
Sbjct: 172 YCLRLKGLERKILITDTPGILEAGVAGTEREQLARALATEADLLLFVV--DNDLRRSEYE 229
Query: 483 FLRYTQQWKKKVVFVLNKSDLYQN 506
L+ + K+ + VLNK+DLY +
Sbjct: 230 PLKGLAEIGKRSLLVLNKTDLYTD 253
>gi|229155238|ref|ZP_04283349.1| Reticulocyte binding protein [Bacillus cereus ATCC 4342]
gi|228628163|gb|EEK84879.1| Reticulocyte binding protein [Bacillus cereus ATCC 4342]
Length = 1219
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEYLMGE 279
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 280 H--FSFILSENEKSLLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKD 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
>gi|294784717|ref|ZP_06750005.1| thiamine-phosphate diphosphorylase [Fusobacterium sp. 3_1_27]
gi|294486431|gb|EFG33793.1| thiamine-phosphate diphosphorylase [Fusobacterium sp. 3_1_27]
Length = 206
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 17/151 (11%)
Query: 98 GGDALDLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRA-LFLIAERVDIAAA 156
G D I+EA+ V IV L S K + A +K + K LF+I +R+DIA A
Sbjct: 19 GKDFYKCIEEAIKGGVKIVQLREKTLSTKDFFIKALKVKEICKSYGVLFIINDRLDIAQA 78
Query: 157 VNASGVLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--V 214
V A GV L +P A+ +KD L+G + ++ A A GAD++
Sbjct: 79 VEADGVHLGQSDMPIEKAKEILKDKF-------LIGVTAKNIEEAKKAELL-GADYIGSG 130
Query: 215 CCFGEGQKADV------IENSLFTNVKIPIF 239
FG K + + ++KIP+F
Sbjct: 131 AIFGTSTKDNAKKLDMKDLKKIVNSIKIPVF 161
>gi|170078662|ref|YP_001735300.1| GTP binding protein [Synechococcus sp. PCC 7002]
gi|169886331|gb|ACB00045.1| GTP binding protein [Synechococcus sp. PCC 7002]
Length = 471
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 371 GEYNSGKSSVINALLGKRYLKDGVV-PTTNEIT----FLRFSDLASEEQQRCERHPDGQY 425
G GKSSV+NALLGK + G + T +I L+ +A+ E QR +GQ
Sbjct: 74 GLVGRGKSSVLNALLGKEVFQTGALHGVTTDIQQVPWTLQTEAIANSEIQRATFFREGQ- 132
Query: 426 ICYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
+ ++DTPG + V + +++L + + DL+LFVI+ D E E L
Sbjct: 133 ---------GRLELIDTPGIDEVNGETREQLAKLIAKQMDLLLFVIAGDMSRVEFEA--L 181
Query: 485 RYTQQWKKKVVFVLNKSDLY 504
+ K ++ V NK D Y
Sbjct: 182 SQLRDVGKPMILVFNKVDQY 201
>gi|312114399|ref|YP_004011995.1| GTP-binding protein HSR1-like protein [Rhodomicrobium vannielii
ATCC 17100]
gi|311219528|gb|ADP70896.1| GTP-binding protein HSR1-related protein [Rhodomicrobium vannielii
ATCC 17100]
Length = 519
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 25/120 (20%)
Query: 357 AVSQID-EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQ 415
A S+++ EP L+I G+ N+GKSS++NALL + V+P TN T + E +
Sbjct: 274 AASKVEAEPLRLLIGGQVNAGKSSLVNALLAEIRAGSDVLPLTNGFT--------AYELK 325
Query: 416 RCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRP 475
R +G + + +++D+PG + Q Q L EE ADL+L+V SA RP
Sbjct: 326 R-----EG----------VPQALLLDSPGLDSPDQPLQALVEE-AANADLILWVASAVRP 369
>gi|255657633|ref|ZP_05403042.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-23m63]
Length = 459
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 35/188 (18%)
Query: 343 KASPLMEEVSLLIDAVSQ---IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
K L +E+ L D + E VIVG+ N GKSS++N++LG+ +P T
Sbjct: 197 KTDELKKEIKKLYDTAESGKILREGLKTVIVGKPNVGKSSLLNSILGENRAIVTDIPGTT 256
Query: 400 EITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPG---TNVILQR--QQR 454
F ++ +P + IVDT G T+ I+++ +R
Sbjct: 257 RDVIEEFVNIKG-----------------IP------LKIVDTAGIRDTDDIVEKIGVER 293
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAI 514
E F ADL++ V+ A R L+E ++ L + K+ + +LNK+DL Q E E+ +
Sbjct: 294 SKESFTS-ADLIVMVLDASRKLSEEDIEILEKLKD--KQTIVLLNKNDLKQE-IEEEKIL 349
Query: 515 SFVKENTM 522
+V+ N++
Sbjct: 350 KYVENNSI 357
>gi|423403817|ref|ZP_17380990.1| hypothetical protein ICW_04215 [Bacillus cereus BAG2X1-2]
gi|423475553|ref|ZP_17452268.1| hypothetical protein IEO_01011 [Bacillus cereus BAG6X1-1]
gi|401647961|gb|EJS65564.1| hypothetical protein ICW_04215 [Bacillus cereus BAG2X1-2]
gi|402435423|gb|EJV67457.1| hypothetical protein IEO_01011 [Bacillus cereus BAG6X1-1]
Length = 1219
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLEEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTT-NEITFLRFSDL------------ 409
E ++ G +++GKS+++N L + L +PT+ N + + D
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGMDRVVVTVKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N E+ VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFEDYKDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR 538
+ +IE +Y S R
Sbjct: 221 SFSNWDIEVDGVYYTSLR 238
>gi|15559199|gb|AAL02149.1| unknown [Acinetobacter lwoffii K24]
Length = 399
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 25/154 (16%)
Query: 361 IDEPFLLVIVGEYNSGKSSVIN------ALLGK--RYLK--DGVVPTTNEITFLRFSDLA 410
+D+ LL++ G++N+GKSS N AL G+ RY G + T+ RF++
Sbjct: 94 LDDTVLLLVFGKFNAGKSSFCNFLAERLALHGRAVRYFHVDAGRLVETDG----RFAEGT 149
Query: 411 SEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI 470
+E R + G ++ +++++DTPG + + LT+ F AD +L++
Sbjct: 150 TETTARLQ----GVHLG-------DKLVLLDTPGLHSVTPENAALTQRFTDSADAILWLT 198
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY 504
S+ P E+ L K ++ V+ +SDLY
Sbjct: 199 SSTSPGQVQELDELGRELHRNKPLLPVITRSDLY 232
>gi|406027995|ref|YP_006726827.1| thiamine-phosphate pyrophosphorylase [Lactobacillus buchneri CD034]
gi|405126484|gb|AFS01245.1| thiamine-phosphate pyrophosphorylase [Lactobacillus buchneri CD034]
Length = 221
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 105 IDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVV-KDRALFLIAERVDIAAAVNASGVL 163
I+ V VG+V L E S + ++E A +K++ + + +I +R+DIA AV+A+GV
Sbjct: 37 IEAGVQNGVGLVQLRQKEGSSREIFELALKVKAITDRYKIPLIIDDRLDIAQAVDAAGVH 96
Query: 164 LSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL 213
L LP +AR + ++G +TL A A+ GAD+L
Sbjct: 97 LGQSDLPVDIARRILGPK-------KIIGATAKTLKQA-KAAEEMGADYL 138
>gi|268611990|ref|ZP_06145717.1| GTP-binding protein [Ruminococcus flavefaciens FD-1]
Length = 297
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 31/156 (19%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNE--ITFLRFSDLASEEQQRCERHPDG 423
+ I G N+GKSS++NA++G++ P T IT +R D D
Sbjct: 6 FVTIAGRTNAGKSSLLNAIVGEKIASVSSKPQTTRTRITGIRNID-------------DV 52
Query: 424 QYICYLPSPILKEMIIVDTPG----TNVILQRQQRLTEEFVPRADLVLFVISADRPLTES 479
Q + + DTPG N + + E V D V+FV+ + + +
Sbjct: 53 QLVFF------------DTPGLHKPVNKLSEHMLNTVRESVSDIDAVVFVMDCTKKINQQ 100
Query: 480 EVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAIS 515
E+ L+ K V+ VLNK DL +N EL I+
Sbjct: 101 ELDLLKSMNSSKMPVILVLNKIDLLKNKDELAPVIA 136
>gi|448237793|ref|YP_007401851.1| putative GTP-binding protein [Geobacillus sp. GHH01]
gi|445206635|gb|AGE22100.1| putative GTP-binding protein [Geobacillus sp. GHH01]
Length = 1306
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 424 QYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ + Y P+ ++ + +VDTPG + + R + ++ AD +LFV + ++++
Sbjct: 858 EVVLYADCPLTRQGVTLVDTPGVDSLNARHTGVAFHYMKHADALLFVTYYNHAFSKADRE 917
Query: 483 FLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
FL + K K+ FV+N +DL Q+ ELE IS++ + I +Y +S+
Sbjct: 918 FLLQLGRVKDTFALDKMFFVINAADLAQSKEELEAVISYMN-GELARFGIRFPRLYALSS 976
Query: 538 RSTLEAK 544
R L K
Sbjct: 977 RLALAEK 983
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----FSDLASEEQQRCERH 420
++ G +++GKSS+INALLG+ L +PT+ + ++ + + + E
Sbjct: 106 LIVAFCGHFSAGKSSLINALLGEPMLPSSPIPTSANLVKVKAGPDYVRVFFHRDEPVEYE 165
Query: 421 P------------DGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA 463
P DG+ I ++ I + I+DTPG + + TE + A
Sbjct: 166 PPYDPDLIRAQCRDGETIEWIEISRTTDAIPPGVAILDTPGIDSTDDAHRLATESALHLA 225
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
D+V +V+ + E F + K V ++N+ D +++
Sbjct: 226 DVVFYVMDYNHVQAELNFQFTKQLTDEGKTVYLIINQIDKHRD 268
>gi|407846982|gb|EKG02904.1| sarcoplasmic reticulum glycoprotein, putative,sarcalumenin
precursor, putative [Trypanosoma cruzi]
Length = 526
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD---------LASEE 413
+PF+ G ++SGKS+ IN LL YL G PTT E T + + + LAS +
Sbjct: 60 KPFV-TFFGPWSSGKSTFINHLLQDNYLWTGPQPTTAEFTVVLYGEEVGPVSGHVLASAK 118
Query: 414 QQRCERHPD------GQYICY-LPSPILKEMIIVDTPG----TNVILQRQ---QRLTEEF 459
+ + G++ Y +P +LK + ++DTPG I +RQ +++ F
Sbjct: 119 NLPFKGLTEFGESFLGKFQGYRVPHELLKRVTLIDTPGILESVKDIRERQFDYVKVSRWF 178
Query: 460 VPRADLVLFVISADR--PLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFV 517
R+DL+ + + E +++F + + KV VLNK+D N EL +
Sbjct: 179 AERSDLIFILFDPSKLDAGIELKMMFKHAFRGMEGKVRIVLNKADSI-NTQELMRVYGSI 237
Query: 518 KENTMKLLN 526
N L+N
Sbjct: 238 FWNLSNLIN 246
>gi|420157694|ref|ZP_14664523.1| thiamine-phosphate diphosphorylase [Clostridium sp. MSTE9]
gi|394755745|gb|EJF38933.1| thiamine-phosphate diphosphorylase [Clostridium sp. MSTE9]
Length = 215
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Query: 105 IDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRAL-FLIAERVDIAAAVNASGVL 163
+++A+ + +V L +AS Y A +K + + + +I +RVDIA AV+A+GV
Sbjct: 27 VEQAIKGGITLVQLREKDASSLDFYRTALGVKRMTDAKGIPLIINDRVDIALAVDAAGVH 86
Query: 164 LSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--VCCFGEGQ 221
+ + LPA R + + L+G +V T++ A A +GAD+L F G
Sbjct: 87 VGQEDLPAKTVRAILGED-------KLLGVSVSTVEEALQA-ERDGADYLGVGAMFATGT 138
Query: 222 KADVIENSL------FTNVKIPIFIMNASPLVDVSKFLKSGASGFVI 262
K D S+ + V IPI ++ + F SG G +
Sbjct: 139 KTDAQLVSMEELRKIRSAVSIPIVVIGGINAKTIPLFRGSGIDGVAV 185
>gi|373856564|ref|ZP_09599308.1| Dynamin family protein [Bacillus sp. 1NLA3E]
gi|372453543|gb|EHP27010.1| Dynamin family protein [Bacillus sp. 1NLA3E]
Length = 1231
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 406 FSDLASEEQQRC-ERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRA 463
F D + E++ C D Y C P+ +E I +VDTPG + I R + E++ +
Sbjct: 777 FRDFVALEEKSCLVDWIDVYYDC----PLTREGITLVDTPGADSINARHTNVAFEYIKSS 832
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVK 518
D +LFV + ++++ FL + K K+ F++N DL + E+ I +VK
Sbjct: 833 DAILFVTYYNHAFSKADREFLIQLGRVKDTFELDKMFFIINAIDLANSEEEMSTVIEYVK 892
Query: 519 ENTMKLLNIENVTIYPVSARSTLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLEKLLY 578
E + I ++ +S+ ++ KL L+ N+S RI F E Y
Sbjct: 893 EQLIG-YGIRKPNMFAISSLLAIQEKL----------QHLTTNES--RIKLF---ENAFY 936
Query: 579 SFLDG 583
F+ G
Sbjct: 937 HFISG 941
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 360 QIDEP-FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSD---------- 408
++DE F + G +++GKS++IN L+G L +PT+ + ++ +
Sbjct: 50 KLDEKEFSIAFCGHFSAGKSTMINKLVGDNLLPSSPIPTSANLVKVKAGEEYAKVFFKQG 109
Query: 409 -----LASEEQQRCERH-PDGQYI-----CYLPSPILKEMIIVDTPGTNVILQRQQRLTE 457
LA + ++ + + DG I + + + +II+DTPG + + TE
Sbjct: 110 KPRLYLAPYDYEKVKTYCKDGDEIEAVEISHKNASLPNHVIIMDTPGIDSTDDAHRIATE 169
Query: 458 EFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
+ ADL+ +V+ + +E +F + Q K++ V+N+ D +++
Sbjct: 170 SALHLADLIFYVMDYNHVQSEVNFLFTKELTQAGKQLCLVINQIDKHRD 218
>gi|296452686|ref|ZP_06894377.1| tRNA modification GTPase TrmE [Clostridium difficile NAP08]
gi|296880062|ref|ZP_06904031.1| tRNA modification GTPase TrmE [Clostridium difficile NAP07]
gi|296258468|gb|EFH05372.1| tRNA modification GTPase TrmE [Clostridium difficile NAP08]
gi|296428929|gb|EFH14807.1| tRNA modification GTPase TrmE [Clostridium difficile NAP07]
Length = 462
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 35/188 (18%)
Query: 343 KASPLMEEVSLLIDAVSQ---IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTN 399
K L +E+ L D + E VIVG+ N GKSS++N++LG+ +P T
Sbjct: 200 KTDELKKEIKKLYDTAESGKILREGLKTVIVGKPNVGKSSLLNSILGENRAIVTDIPGTT 259
Query: 400 EITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPG---TNVILQR--QQR 454
F ++ +P + IVDT G T+ I+++ +R
Sbjct: 260 RDVIEEFVNIKG-----------------IP------LKIVDTAGIRDTDDIVEKIGVER 296
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAI 514
E F ADL++ V+ A R L+E ++ L + K+ + +LNK+DL Q E E+ +
Sbjct: 297 SKESFTS-ADLIVMVLDASRKLSEEDIEILEKLKD--KQTIVLLNKNDLKQE-IEEEKIL 352
Query: 515 SFVKENTM 522
+V+ N++
Sbjct: 353 KYVENNSI 360
>gi|389756649|ref|ZP_10191509.1| hypothetical protein UU5_17107 [Rhodanobacter sp. 115]
gi|388431353|gb|EIL88428.1| hypothetical protein UU5_17107 [Rhodanobacter sp. 115]
Length = 586
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 369 IVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFS-----------------DLAS 411
++G +++GKSS++NA+L + L G+ P T T LR+ DL +
Sbjct: 45 VIGGFSAGKSSLLNAMLNRELLPVGITPETELATELRYGEDEHLLAWRFDGTSERMDLGA 104
Query: 412 EEQQRCERHPDGQYICYLPSPILK---EMIIVDTPGTNVILQRQQRLTEEFVPRADLVLF 468
+ + + ++ + LK E+++VD PG + ++PR +
Sbjct: 105 INKLKAKASEFTHLQAFVANVFLKQRPEIVLVDMPGFGSSFANHDKAAAYYLPRGAHFIV 164
Query: 469 VIS-ADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNI 527
V S D LT S L + FV++K++L + A +++ + +K+ +I
Sbjct: 165 VTSIEDGNLTGSMTRHLSAIHDLGRSFSFVVSKTNL-RTASDVDAVVGVIKDQIHTAFDI 223
Query: 528 E 528
+
Sbjct: 224 Q 224
>gi|311030368|ref|ZP_07708458.1| Dynamin family protein [Bacillus sp. m3-13]
Length = 1227
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 397 TTNEITFLRFSDLASEEQQRCERHPDGQYI-CYLPSPILKE-MIIVDTPGTNVILQRQQR 454
T ++T F ++E++ C ++I + P ++ + +VDTPG + I R
Sbjct: 763 TLQQVTLDEFEAYVAQEEKSC----FVEWIEVFYDCPFTRQGLTLVDTPGADSINARHTD 818
Query: 455 LTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVFVLNKSDLYQNAFE 509
++ +++ AD +LFV ++++ FL + K K+ F++N +DL N E
Sbjct: 819 VSFDYIKNADAILFVTYYQHAFSKADREFLIQLGRVKDAFAMDKMFFLVNAADLANNEEE 878
Query: 510 LEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
LE +V E+ + I + +YPVS+ L+ K
Sbjct: 879 LELVCDYV-EDQLTAYGIRHPRLYPVSSLLALKEK 912
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 34/195 (17%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPTT---------NEITFLRFSDLASEE---- 413
+ G +++GKSS IN +L + L +PT+ E+ + F + S E
Sbjct: 57 IAFCGHFSAGKSSFINEILEEAILPASPIPTSANVVQIKNGEELAHVHFFEGESLEILPP 116
Query: 414 ------QQRCERHPDGQYICY------LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
+ C+ + + Y LPS +M+I+DTPG + + TE +
Sbjct: 117 VSFEHVKAYCKNGDQVEAVEYQYPFEKLPS----DMVILDTPGVDSTDDAHRISTESALH 172
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENT 521
AD++ +V+ + +E + F++ Q +KK+ ++N+ D ++ EE I F N
Sbjct: 173 LADVIFYVMDYNHVQSEVNLKFIKELQDKEKKIYLIVNQIDKHR-----EEEIPFATYNE 227
Query: 522 MKLLNIENVTIYPVS 536
+ + + I P S
Sbjct: 228 RIMESFGDWGIIPAS 242
>gi|294498224|ref|YP_003561924.1| putative GTPase [Bacillus megaterium QM B1551]
gi|294348161|gb|ADE68490.1| putative GTPase [Bacillus megaterium QM B1551]
Length = 1205
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 27/187 (14%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASE---EQQRC 417
++ F++ G +++GKSS+IN L+G+ L +PT+ + ++ D + +QR
Sbjct: 45 VNGEFVVAFCGHFSAGKSSMINELMGQAILPASPIPTSANLVSVKAGDEHATVYYRKQRP 104
Query: 418 ERHP-------------DGQ-----YICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF 459
R+ DG ++ I K ++++DTPG + + TE
Sbjct: 105 VRYEAPYEYEQIKQFAVDGDEVESIHLSIDTDAIPKSVVVMDTPGIDSTDDAHRVSTESA 164
Query: 460 VPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ------NAFELEEA 513
+ AD++ +V+ + E + F + Q+ K + ++N+ D +Q AF+
Sbjct: 165 LHLADVIFYVMDYNHVQAELNLQFAKQLQEANKTLYLIVNQIDKHQEDQLTFQAFKESVE 224
Query: 514 ISFVKEN 520
SF+K N
Sbjct: 225 TSFLKWN 231
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 437 MIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK----- 491
+ +VDTPG + I R + E++ AD +LFV + ++++ FL + K
Sbjct: 784 ITLVDTPGADSINARHTGVAFEYIKNADAILFVTYYNHAFSKADREFLIQLGRVKDVFAL 843
Query: 492 KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLE 542
K+ F++N +DL + EL+ ++VKE ++ I +YPVS+ L+
Sbjct: 844 DKMFFLVNAADLASSDTELQLVQTYVKEQ-LEQYGIRFPRLYPVSSLQALQ 893
>gi|421060375|ref|ZP_15522861.1| Dynamin family protein, partial [Pelosinus fermentans B3]
gi|392457244|gb|EIW33939.1| Dynamin family protein, partial [Pelosinus fermentans B3]
Length = 775
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 402 TFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEF 459
T FSD + E++ C D Y C P+ + I +VDTPG + I R + +F
Sbjct: 321 TVTEFSDYVAIEEKSCFVEWIDLYYDC----PLTRSGITLVDTPGADSINARHTGVAFDF 376
Query: 460 VPRADLVLFVISADRPLTESEVVFL----RYTQQWK-KKVVFVLNKSDLYQNAFELEEAI 514
+ +D +LFV + ++++ FL R ++ K+ F++N DL N + E
Sbjct: 377 IKNSDAILFVTYYNHAFSKADREFLIQLGRVKDSFQLDKMFFMINAIDLADNEEDKETVT 436
Query: 515 SFVKENTMKLLNIENVTIYPVSARSTLEAK 544
+V E +K + N +YP+S+ L+ K
Sbjct: 437 LYVHEQLIK-YGVRNPHLYPLSSLQALKEK 465
>gi|42780775|ref|NP_978022.1| hypothetical protein BCE_1701 [Bacillus cereus ATCC 10987]
gi|42736695|gb|AAS40630.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 1219
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLDEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEYLMGE 279
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 280 H--FSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
>gi|402552948|ref|YP_006594219.1| hypothetical protein BCK_00520 [Bacillus cereus FRI-35]
gi|401794158|gb|AFQ08017.1| hypothetical protein BCK_00520 [Bacillus cereus FRI-35]
Length = 1219
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 680 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 729
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 730 AVQKGYDTVSAHLGEQVQVTLDEFSDYVANEEKSCFVEYMELYYDCALTR---QGVALVD 786
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 787 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 846
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 847 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 893
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 363 EPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR--FSDL----------- 409
E ++ G +++GKS+++N L + L +PT+ + + F +
Sbjct: 42 EQLMIAFCGHFSAGKSTMMNHLYKAQLLPTSPIPTSANVVKIEKGFDRVVVTIKSGEQYE 101
Query: 410 ------ASEEQQRCERHPD--GQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVP 461
A E +Q C+ + G +I +PI + +++VDTPG + Q TE +
Sbjct: 102 YDGAYSAEELKQICKDGDEVIGVHIYRNDAPIPEGVMLVDTPGIDSTDDAHQLATESTLH 161
Query: 462 RADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLY-QNAFELEEAISFVKEN 520
AD++ +++ + +E + F++ +Q K V V+N+ D + +N + VK+
Sbjct: 162 LADVIFYMMDYNHVQSEVNLQFVKELKQRNKTVYLVVNQIDKHKENELSFADYRDSVKQ- 220
Query: 521 TMKLLNIENVTIYPVSAR------STLEAKLSVSSAVGKDHSELSVNDSHWRINTFDKLE 574
+ +IE +Y S R + +E ++ +++ K+ E V D R + E
Sbjct: 221 SFSNWDIEVDGVYYTSLRMMNHPHNEIENLETLITSIMKE-KEQYVRDGMERETEYLMGE 279
Query: 575 KLLYSFLDGSSSTGKERMRLKLETPIRIAERLLSSCETLVMKDCQDAKQDLTLANEMIDS 634
+SF+ + + +L +P+ I+E ++ E L ++A ++ + NE I
Sbjct: 280 H--FSFILSENEKALLKYEEELASPLSISE-IVEKKEELTEMKHREANKESQMRNEFIKG 336
Query: 635 LK 636
L+
Sbjct: 337 LQ 338
>gi|323490387|ref|ZP_08095602.1| hypothetical protein GPDM_13581 [Planococcus donghaensis MPA1U2]
gi|323396057|gb|EGA88888.1| hypothetical protein GPDM_13581 [Planococcus donghaensis MPA1U2]
Length = 337
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 37/182 (20%)
Query: 361 IDEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERH 420
+++ L+ ++GE N+GKS+ +N ++G+ D+AS
Sbjct: 28 LEQELLISLIGEVNAGKSTTVNKIIGE--------------------DIASTNPM----- 62
Query: 421 PDGQYICYLPSPI--LKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVI-SADRPLT 477
G+ + P I L+ + +DTPG N + T EFV ++D+VLF + +A +
Sbjct: 63 -PGETVSVDPYNIRGLENIKFMDTPGLNDPNDENPKKTLEFVQKSDVVLFFLNAAGTVFS 121
Query: 478 ESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
ESE ++ K ++ VLNK D A ++ + F+K +T + P+S+
Sbjct: 122 ESEKEKFNEIEKHNKDILIVLNKIDA---AEDVPSIVKFIKRHTA-----SKYKVIPISS 173
Query: 538 RS 539
++
Sbjct: 174 KT 175
>gi|257052539|ref|YP_003130372.1| thiamine-phosphate pyrophosphorylase [Halorhabdus utahensis DSM
12940]
gi|256691302|gb|ACV11639.1| thiamine-phosphate pyrophosphorylase [Halorhabdus utahensis DSM
12940]
Length = 211
Score = 49.7 bits (117), Expect = 0.008, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 21/176 (11%)
Query: 103 DLIDEAVAKFVGIVVLNGGEASGKSVYEAACLLKSVVKDRALFLIA-ERVDIAAAVNASG 161
++++ A+ V +V L + + + YE ++ ++ + LI +RVD+A A+ A G
Sbjct: 22 EIVEAAIEGGVDVVQLREKDVNARERYEMGREVREHTREAGVPLIVNDRVDLALALEADG 81
Query: 162 VLLSDQGLPAIVARNTMKDSMSESVVLPLVGRNVQTLDAAFNASSSEGADFL--VCCFGE 219
V L D+ LP VAR + + ++GR+V +D A A ++ GAD+L F
Sbjct: 82 VHLGDEDLPVAVARELLGED-------AIIGRSVSFVDDAREAETA-GADYLGVGAIFPT 133
Query: 220 GQKADVIE----------NSLFTNVKIPIFIMNASPLVDVSKFLKSGASGFVISLE 265
G K D+ + ++ V IP+ + + + +GA+G + E
Sbjct: 134 GSKDDIDDAEYAIGIDRVAAIVDAVDIPVVGIGGVTAENADSVIDAGAAGVAVITE 189
>gi|319892435|ref|YP_004149310.1| hypothetical protein SPSINT_1146 [Staphylococcus pseudintermedius
HKU10-03]
gi|317162131|gb|ADV05674.1| hypothetical protein SPSINT_1146 [Staphylococcus pseudintermedius
HKU10-03]
Length = 1151
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 26/193 (13%)
Query: 336 EAIDVIKKASPLME--EVSLLIDAVSQIDEP-----FLLVIVGEYNSGKSSVINALLGKR 388
E +D++ K +E + S I ++Q+ + + + VG +++GKS+VIN L+G+
Sbjct: 5 EQLDILYKLKKEVEKSDHSAFIHTINQMIKKVYLNHYTMTFVGHFSAGKSTVINRLIGQD 64
Query: 389 YLKDGVVPTTNEITFL---------------RFSDLAS----EEQQRCERHPDGQYICYL 429
L VPTT+ + +++ L S ++ R H + I
Sbjct: 65 ILPSSPVPTTSNTALVTIAEAPGITANIEGQKYTQLNSYDDVKQMNRENFHVESIDIRIQ 124
Query: 430 PSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQ 489
K DTPG + +Q TE+F+ +++V + + + + F++ +
Sbjct: 125 SDAFHKGFTFQDTPGVDSNVQSHNMQTEQFLYTSNIVFYTVDYNHVQSALNFQFMKRLNR 184
Query: 490 WKKKVVFVLNKSD 502
VVFV+N+ D
Sbjct: 185 AGIPVVFVINQID 197
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 9/119 (7%)
Query: 429 LPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQ 488
LP LK+ +IVD+ G + QR TE+ + +DL+L+V + T+++ F+ + +
Sbjct: 735 LPLDWLKDKVIVDSLGLHSNNQRHTNETEKILTTSDLILYVSYFNHAFTDNDKAFIEHMK 794
Query: 489 ---QWKKKVVF--VLNKSDLYQNAFELEEAISFVKENTMKL-LNIENVTIYPVSARSTL 541
Q K++ F V+N +DL +N + +V + M++ + E I+ VS+R+ L
Sbjct: 795 NINQLKEQQAFKMVINATDLAENEVDKRAVRDYVADALMQVQMQPE---IFSVSSRAAL 850
>gi|319766610|ref|YP_004132111.1| dynamin family protein [Geobacillus sp. Y412MC52]
gi|317111476|gb|ADU93968.1| Dynamin family protein [Geobacillus sp. Y412MC52]
Length = 1306
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 424 QYICYLPSPILKEMI-IVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVV 482
+ + Y P+ ++ + +VDTPG + + R + ++ AD +LFV + ++++
Sbjct: 858 EVVLYADCPLTRQGVTLVDTPGVDSLNARHTGVAFHYMKHADALLFVTYYNHAFSKADRE 917
Query: 483 FLRYTQQWK-----KKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSA 537
FL + K K+ FV+N +DL Q+ ELE IS++ + I +Y +S+
Sbjct: 918 FLLQLGRVKDTFALDKMFFVINAADLAQSKEELEAVISYMN-GELARFGIRFPRLYALSS 976
Query: 538 RSTLEAK 544
R L K
Sbjct: 977 RLALAEK 983
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLR----FSDLASEEQQRCERH 420
++ G +++GKSS+INALLG+ L +PT+ + ++ + + + E
Sbjct: 106 LIVAFCGHFSAGKSSLINALLGEPMLPSSPIPTSANLVKVKAGPDYVRVFFHRDEPVEYE 165
Query: 421 P------------DGQYICYL-----PSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA 463
P DG+ I ++ I + I+DTPG + + TE + A
Sbjct: 166 PPYDPDLIRAQCRDGETIEWIEISRTTDAIPPGVAILDTPGIDSTDDAHRLATESALHLA 225
Query: 464 DLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQN 506
D+V +V+ + E F + K V ++N+ D +++
Sbjct: 226 DVVFYVMDYNHVQAELNFQFTKQLTDEGKTVYLIINQIDKHRD 268
>gi|284048574|ref|YP_003398913.1| ribosome-associated GTPase EngA [Acidaminococcus fermentans DSM
20731]
gi|283952795|gb|ADB47598.1| ribosome-associated GTPase EngA [Acidaminococcus fermentans DSM
20731]
Length = 443
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ I+G N GKSS+ N ++G+ R + V TT + D+ E+ DGQ
Sbjct: 180 VAIIGRPNVGKSSIFNDIIGQTRSIVSDVAGTTRDAI-----DVPVEK--------DGQT 226
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
++ + ++ +D P + R R V R+D+VL V++A +TE +
Sbjct: 227 YLFIDTAGMRRKGKIDEPIEKYSIIRTLRA----VDRSDVVLLVLNAVEGITEQDKKIAG 282
Query: 486 YTQQWKKKVVFVLNKSDLYQN 506
Y + K +V V+NK DLY N
Sbjct: 283 YAHEAGKGIVIVVNKWDLYPN 303
>gi|91202872|emb|CAJ72511.1| similar to thiamin phosphate synthase [Candidatus Kuenenia
stuttgartiensis]
Length = 219
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 126 KSVYEAACLLKSVVKD-RALFLIAERVDIAAAVNASGVLLSDQGLPAIVARNTMKDSMSE 184
K +Y AC L+++ A +I +RVDI A NA GV L Q +P RN +
Sbjct: 52 KDIYSLACELRTITHGLNASLIINDRVDIVLAANADGVHLGWQSMPVSRVRNLIGFER-- 109
Query: 185 SVVLPLVGRNVQTLDAAFNASSSEGADFLVC--CFGEGQKADVIENS-------LFTNVK 235
++G + + A A S GAD++ F K V+E + L ++
Sbjct: 110 -----IIGISAHNMQEALQARDS-GADYITYGPIFKTPSKEGVVEPTGTESLRKLKEKIR 163
Query: 236 IPIFIMNASPLVDVSKFLKSGASGFVI 262
IP+ + + + ++SGA+G +
Sbjct: 164 IPVIALGGITVDNAESVMESGANGIAV 190
>gi|150016018|ref|YP_001308272.1| GTP-binding protein EngA [Clostridium beijerinckii NCIMB 8052]
gi|189037141|sp|A6LSI6.1|DER_CLOB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149902483|gb|ABR33316.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052]
Length = 438
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 38/155 (24%)
Query: 362 DEPFLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHP 421
DE + ++G+ N GKSS+IN LLG+ + +P T + S L +EE +
Sbjct: 174 DEYIRIAMIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDSI--DSHLETEEGK------ 225
Query: 422 DGQYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEF-----------VPRADLVLFVI 470
I+VDT G L+R+ ++ EE + RAD+ + +I
Sbjct: 226 ---------------FILVDTAG----LRRKSKVKEEIERYSVIRTYAAIERADVCILMI 266
Query: 471 SADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
A +TE + + Y + +K ++ ++NK DL +
Sbjct: 267 DATEGITEQDEKIIGYAHELRKAIMVIVNKWDLVE 301
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
++ IVG N GKS++ N L GKR +V T +T R + + ++
Sbjct: 5 IVAIVGRPNVGKSTLFNKLAGKRI---SIVQDTPGVT-------------RDRVYAEAEW 48
Query: 426 ICYLPSPILKEMIIVDTPG-----TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESE 480
+ Y ++DT G ++I+++ +R + AD+++F++ LT ++
Sbjct: 49 LRY-------NFTMIDTGGIEPENNDIIIKQMRRQANIAIETADVIIFIVDGKEGLTAAD 101
Query: 481 VVFLRYTQQWKKKVVFVLNKSDLYQ---NAFEL 510
++ KK VV V+NK D + NA+E
Sbjct: 102 NEVATMLRKSKKPVVLVVNKVDNLKDENNAYEF 134
>gi|311032128|ref|ZP_07710218.1| hypothetical protein Bm3-1_16589 [Bacillus sp. m3-13]
Length = 681
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVPT----------TNEITFLRFSDLASEEQQR 416
LV+ G +GK+S IN+++G++ L D VP NEI+ S L
Sbjct: 380 LVVTGTVQNGKTSFINSIIGEKLLGDETVPVFVSSNGDIAEMNEISTTGTSALGD----- 434
Query: 417 CERHPDGQYI-CYLPSPIL--KEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISAD 473
H G I PS L +E ++ TP +V T +++P +D +L+++ A
Sbjct: 435 ISEHKAGSIIDLKWPSQFLEDEEYSLISTPEFSVDAIDNNE-TMKYIPLSDGLLYILDAQ 493
Query: 474 RPLTESEVVFLRYTQQWKKK--VVFVLNKSDLYQNAFELEEAISFVKE 519
P TE E+ L ++ + V FV+NK D AF EA V+E
Sbjct: 494 TPFTEDELKVLVKIKERAPEVPVHFVINKMD---TAFHEAEAAQIVEE 538
>gi|375283649|ref|YP_005104087.1| hypothetical protein BCN_1554 [Bacillus cereus NC7401]
gi|358352175|dbj|BAL17347.1| conserved hypothetical protein [Bacillus cereus NC7401]
Length = 1082
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 331 RSVLLEAIDVIKKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNS--GKSSVINALLGKR 388
+ LLE + + K E++ L +A++QID+ V +Y S GK + L R
Sbjct: 543 KQALLEDMKAVYKL--FHYEITTLDEALAQIDK------VMKYPSPTGKQKTTFSFL--R 592
Query: 389 YLKDGVVPTTN------EITFLRFSDLASEEQQRC-ERHPDGQYICYLPSPILKEMIIVD 441
++ G + ++T FSD + E++ C + + Y C L + + +VD
Sbjct: 593 AVQKGYDTVSAHLGEKVQVTLEEFSDYVANEEKSCFVEYMELYYDCTLTR---QGVALVD 649
Query: 442 TPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWK-----KKVVF 496
TPG + I R + +++ AD +LFV + + ++ FL + K K+ F
Sbjct: 650 TPGADSINARHTDVAFQYIKNADAILFVTYYNHVFSRADREFLIQLGRVKDTFALDKMFF 709
Query: 497 VLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVSARSTLEAK 544
++N +DL ++ ELE ++ + ++ I N ++ +S+ LE K
Sbjct: 710 LINAADLAESEEELEMVKGYIADQLLQ-YGIRNPRLFAISSLCALEEK 756
>gi|383753798|ref|YP_005432701.1| putative GTP-binding protein Era [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365850|dbj|BAL82678.1| putative GTP-binding protein Era [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 299
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 44/185 (23%)
Query: 366 LLVIVGEYNSGKSSVINALLGKRY--LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDG 423
+ ++G N GKS++IN L+G++ + D T N I
Sbjct: 9 FIAVIGRPNVGKSTLINTLIGQKIAIMSDKPQTTRNRI---------------------- 46
Query: 424 QYICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRA-------DLVLFVISADRPL 476
+C L P +++ +DTPG I + + +L E V A D + FV+ A +
Sbjct: 47 --LCILTQPD-AQIVFLDTPG---IHKPKHKLGEYMVKAAEGTLREVDAIFFVVDATEKM 100
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKENTMKLLNIENVTIYPVS 536
E L Q K+ V+ V+NK DL E E+A+ + T K E + P+S
Sbjct: 101 GPGEHYILERLQATKRPVILVVNKLDL----IEREQALPIISNYTSKY---EFAGVVPIS 153
Query: 537 ARSTL 541
A+ +
Sbjct: 154 AKEEM 158
>gi|407861134|gb|EKG07605.1| hypothetical protein TCSYLVIO_001268 [Trypanosoma cruzi]
Length = 906
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVP-TTNEITFLRFSDLASEEQQRCERHPDGQY 425
+V+VG+ +GKSS++NALLG+ K P TT +I+F + ++ EE QR + G
Sbjct: 242 IVLVGKACAGKSSLLNALLGQTLAKTSSTPNTTRQISF--YQSVSPEEMQRY-LNVKGNG 298
Query: 426 ICYLPSPILKEMIIVDTPGTNV------ILQRQQRLTEEF--VPRA-DLVLFVISADRPL 476
+ LP + ++ VD PG + + LT+ + V R+ + VLF I +R L
Sbjct: 299 LVKLPGGGV-QLTFVDVPGFGIEGMSDHWRDKAIALTDAYLGVRRSVNTVLFCIDCERGL 357
Query: 477 TESEVVFLRYTQQWKKKVVFVLNKSD 502
T+ ++ + + + VL K D
Sbjct: 358 TKVDLRYFNWLENLHGVFFIVLTKCD 383
>gi|154148056|ref|YP_001406361.1| dynamin family protein [Campylobacter hominis ATCC BAA-381]
gi|153804065|gb|ABS51072.1| dynamin family protein [Campylobacter hominis ATCC BAA-381]
Length = 655
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 427 CYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR- 485
Y P+ ILK +++VDTPGTN + ++T +++ R D ++ A R ES++ F+
Sbjct: 170 IYYPAEILKSLVVVDTPGTNDPNIFRSKITLDWIKRCDAAIYATYAGRAFDESDIKFINE 229
Query: 486 --YTQQWKKKVVFVLNKSDLYQNAFELEEAISFVKEN 520
+ + K++V +NK D+ +N E +E + K+N
Sbjct: 230 YLLSLENSKRIV-AINKIDVLRNFDEAKELLENNKKN 265
>gi|419626878|ref|ZP_14159797.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23263]
gi|380607715|gb|EIB27566.1| tRNA modification GTPase TrmE [Campylobacter jejuni subsp. jejuni
LMG 23263]
Length = 442
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 31/198 (15%)
Query: 332 SVLLEAIDVI-KKASPLMEEVSLLIDAVSQIDEPFLLVIVGEYNSGKSSVINALLG-KRY 389
S LLE I + ++ S +++E+ L + + E F + IVG+ N GKSS++NALL +R
Sbjct: 181 SDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERA 240
Query: 390 LKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYICYLPSPILKEMIIVDTPGT---- 445
+ + TT + EE + H + I+DT G
Sbjct: 241 IVSDIAGTTRDTI---------EESFKLGTHL---------------LRIIDTAGIRESK 276
Query: 446 NVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLRYTQQWKKKVVFVLNKSDLYQ 505
+ I Q L+++ + AD++L V A R + + KK+ ++LNKSDL +
Sbjct: 277 DAIEQIGVALSKKSLEDADIILAVFDASRVQDKEDGKIFELLANTDKKIFWILNKSDL-E 335
Query: 506 NAFELEEAISFVKENTMK 523
N F+ + +F+K + K
Sbjct: 336 NVFKNTQNKNFIKLSAQK 353
>gi|428307656|ref|YP_007144481.1| GTP-binding protein HSR1-like protein [Crinalium epipsammum PCC
9333]
gi|428249191|gb|AFZ14971.1| GTP-binding protein HSR1-related protein [Crinalium epipsammum PCC
9333]
Length = 519
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 26/143 (18%)
Query: 365 FLLVIVGEYNSGKSSVINALLGKRYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQ 424
L+V+ G ++GK+S++N L+G+ K T E+ G+
Sbjct: 128 LLVVVFGTGSAGKTSLVNGLIGRMVGKVDAPMGTTEV---------------------GE 166
Query: 425 YICYLPSPILKEMIIVDTPG---TNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEV 481
+ ++++I DTPG V +++L + ADL+LFV+ D L +SE
Sbjct: 167 TYTLKLKGLNRQILITDTPGILEAGVAGTEREQLARQLATEADLLLFVVDND--LRQSEY 224
Query: 482 VFLRYTQQWKKKVVFVLNKSDLY 504
L+ + K+ + +LNK+DLY
Sbjct: 225 NPLKALAEIGKRSLLILNKTDLY 247
>gi|284929161|ref|YP_003421683.1| small GTP-binding protein domain protein [cyanobacterium UCYN-A]
gi|284809620|gb|ADB95325.1| small GTP-binding protein domain protein [cyanobacterium UCYN-A]
Length = 472
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 367 LVIVGEYNSGKSSVINALLGKRYLKDGVVP-TTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ I G GKSS++N+LLGK K G + T I + L +++
Sbjct: 76 IAIFGMVGKGKSSILNSLLGKEAFKTGALHGITKTIATANWKLLKNKDS----------- 124
Query: 426 ICYLPSPILKEMIIVDTPGTNVIL-QRQQRLTEEFVPRADLVLFVISADRPLTESEVVFL 484
YL + ++DTPG + I + ++ ++ + +ADL+LF I+ D + + E L
Sbjct: 125 -IYLSGSKYHRIQLIDTPGLDEINGKNRETISYKVAEKADLILFAITED--MVKKEFDAL 181
Query: 485 RYTQQWKKKVVFVLNKSDLYQNAFELE 511
Q+ K V+ V NK D Y LE
Sbjct: 182 YTLQELGKPVIIVFNKIDQYSELDRLE 208
>gi|440682108|ref|YP_007156903.1| small GTP-binding protein [Anabaena cylindrica PCC 7122]
gi|428679227|gb|AFZ57993.1| small GTP-binding protein [Anabaena cylindrica PCC 7122]
Length = 485
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 15/142 (10%)
Query: 371 GEYNSGKSSVINALLGKRYLK----DGVVPTTNEITFLRFSDLASEEQQRCERHPDGQYI 426
G GKSS++NAL+G+ + GV T ++ + R ++ ++++ R
Sbjct: 85 GMVGRGKSSLLNALVGESVFETGPLHGVTRTEQKVNW-RITEETIGKKEKALR------- 136
Query: 427 CYLPSPILKEMIIVDTPGTN-VILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
L + ++ ++DTPG + V + + L E+ +ADL+LFVI+AD +T+ E L
Sbjct: 137 VTLGTSSQSQVELIDTPGLDEVDGETRAVLAEQIAKQADLILFVITAD--ITKMEHEALS 194
Query: 486 YTQQWKKKVVFVLNKSDLYQNA 507
++ K ++ V NK D Y A
Sbjct: 195 QLREAGKPIILVFNKVDQYPEA 216
>gi|260881015|ref|ZP_05403389.2| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544]
gi|260850181|gb|EEX70188.1| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544]
Length = 445
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 367 LVIVGEYNSGKSSVINALLGK-RYLKDGVVPTTNEITFLRFSDLASEEQQRCERHPDGQY 425
+ ++G N GKSS++NA+LG+ R + V TT + F+ DG
Sbjct: 181 IAVIGRPNVGKSSIVNAILGEERVIVSDVPGTTRDAIDTHFTK-------------DGTK 227
Query: 426 ICYLPSPILKEMIIVDTPGTNVILQRQQRLTEEFVPRADLVLFVISADRPLTESEVVFLR 485
+ + ++ +D P + R R + RAD+VL +I+A +TE +
Sbjct: 228 FTLIDTAGMRRRGKIDEPVERYSVMRSLRAID----RADVVLMMINAFEGITEQDKKIAG 283
Query: 486 YTQQWKKKVVFVLNKSDLY 504
Y + K VV V+NK D+Y
Sbjct: 284 YAHESGKGVVIVVNKWDIY 302
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,445,645,797
Number of Sequences: 23463169
Number of extensions: 569506599
Number of successful extensions: 2046926
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 5281
Number of HSP's that attempted gapping in prelim test: 2038220
Number of HSP's gapped (non-prelim): 10688
length of query: 921
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 769
effective length of database: 8,792,793,679
effective search space: 6761658339151
effective search space used: 6761658339151
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)