Query 002442
Match_columns 921
No_of_seqs 410 out of 2058
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 00:04:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002442.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002442hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1066 Glucosidase II catalyt 100.0 7E-238 2E-242 1968.7 68.8 872 25-921 22-915 (915)
2 PLN02763 hydrolase, hydrolyzin 100.0 5E-146 1E-150 1318.3 65.8 604 218-869 66-681 (978)
3 KOG1065 Maltase glucoamylase a 100.0 2E-139 5E-144 1216.2 51.2 736 36-884 33-783 (805)
4 COG1501 Alpha-glucosidases, fa 100.0 7E-138 1E-142 1243.0 61.0 585 212-841 139-728 (772)
5 PRK10658 putative alpha-glucos 100.0 3E-133 6E-138 1195.7 67.3 651 43-778 7-665 (665)
6 PRK10426 alpha-glucosidase; Pr 100.0 6E-123 1E-127 1104.8 55.4 537 208-785 64-627 (635)
7 PF01055 Glyco_hydro_31: Glyco 100.0 2E-111 3E-116 980.9 38.2 440 337-781 1-441 (441)
8 cd06602 GH31_MGAM_SI_GAA This 100.0 1.9E-92 4.1E-97 790.2 31.3 334 356-712 1-339 (339)
9 cd06603 GH31_GANC_GANAB_alpha 100.0 5.4E-92 1.2E-96 788.4 31.4 339 356-694 1-339 (339)
10 cd06600 GH31_MGAM-like This fa 100.0 9.3E-90 2E-94 762.8 30.0 317 356-694 1-317 (317)
11 cd06604 GH31_glucosidase_II_Ma 100.0 2.1E-89 4.6E-94 767.8 31.1 335 356-694 1-339 (339)
12 cd06601 GH31_lyase_GLase GLase 100.0 2.4E-82 5.1E-87 703.5 25.0 292 356-677 1-332 (332)
13 cd06598 GH31_transferase_CtsZ 100.0 1.9E-79 4.1E-84 680.7 28.0 307 356-677 1-317 (317)
14 cd06593 GH31_xylosidase_YicI Y 100.0 4.4E-79 9.6E-84 676.7 27.7 306 356-679 1-308 (308)
15 cd06591 GH31_xylosidase_XylS X 100.0 1.2E-77 2.6E-82 666.8 27.8 305 356-669 1-318 (319)
16 cd06599 GH31_glycosidase_Aec37 100.0 6E-76 1.3E-80 652.7 25.4 302 356-670 1-317 (317)
17 cd06597 GH31_transferase_CtsY 100.0 1.1E-75 2.3E-80 655.1 25.4 298 356-666 1-331 (340)
18 cd06594 GH31_glucosidase_YihQ 100.0 2.1E-75 4.6E-80 647.2 25.7 298 356-668 1-315 (317)
19 cd06595 GH31_xylosidase_XylS-l 100.0 1.8E-71 3.9E-76 610.2 23.4 280 355-669 1-291 (292)
20 cd06589 GH31 The enzymes of gl 100.0 4.9E-67 1.1E-71 568.1 22.1 262 356-670 1-265 (265)
21 cd06592 GH31_glucosidase_KIAA1 100.0 9E-61 2E-65 528.1 21.3 280 359-670 12-303 (303)
22 cd06596 GH31_CPE1046 CPE1046 i 100.0 4.3E-47 9.3E-52 397.8 16.1 240 356-684 1-261 (261)
23 PF13802 Gal_mutarotas_2: Gala 99.5 2.6E-14 5.6E-19 123.0 6.8 68 225-302 1-68 (68)
24 PF02065 Melibiase: Melibiase; 98.9 1.6E-08 3.4E-13 115.6 13.2 293 342-684 14-340 (394)
25 COG3345 GalA Alpha-galactosida 98.0 6.7E-05 1.5E-09 86.1 14.4 301 337-683 260-589 (687)
26 PLN03231 putative alpha-galact 97.9 0.00022 4.8E-09 80.3 15.4 194 377-605 16-255 (357)
27 PLN02229 alpha-galactosidase 97.8 0.00032 7E-09 80.5 14.8 177 355-605 57-253 (427)
28 PLN02899 alpha-galactosidase 97.7 0.0011 2.4E-08 78.4 17.4 190 377-605 46-286 (633)
29 PLN02692 alpha-galactosidase 97.7 0.0014 3E-08 75.1 17.7 96 344-444 39-146 (412)
30 PLN02808 alpha-galactosidase 97.4 0.0051 1.1E-07 70.3 17.8 85 355-444 26-122 (386)
31 PF13200 DUF4015: Putative gly 91.0 1.3 2.7E-05 49.8 10.1 129 370-514 4-144 (316)
32 PLN02355 probable galactinol-- 90.8 0.58 1.3E-05 57.2 7.7 102 334-438 162-313 (758)
33 PF14871 GHL6: Hypothetical gl 89.5 1.1 2.4E-05 43.9 7.1 84 422-515 47-132 (132)
34 PLN02219 probable galactinol-- 86.7 2 4.2E-05 52.8 8.2 103 336-438 160-305 (775)
35 TIGR02456 treS_nterm trehalose 79.8 11 0.00023 45.8 10.9 99 411-515 66-198 (539)
36 PF02638 DUF187: Glycosyl hydr 77.8 13 0.00028 41.9 9.9 132 377-514 17-161 (311)
37 PRK10785 maltodextrin glucosid 75.7 19 0.00041 44.3 11.4 130 377-516 177-337 (598)
38 PLN02684 Probable galactinol-- 73.6 9.3 0.0002 47.1 7.8 102 336-438 163-304 (750)
39 PLN02711 Probable galactinol-- 66.0 13 0.00028 46.0 6.8 69 336-406 174-257 (777)
40 TIGR02403 trehalose_treC alpha 65.9 36 0.00078 41.4 10.7 132 377-516 25-195 (543)
41 PF02449 Glyco_hydro_42: Beta- 64.2 9.9 0.00022 43.7 5.3 126 378-520 9-140 (374)
42 TIGR01370 cysRS possible cyste 63.7 14 0.00031 41.5 6.2 101 394-515 64-168 (315)
43 TIGR01515 branching_enzym alph 59.1 32 0.0007 42.4 8.7 96 411-515 196-296 (613)
44 KOG1065 Maltase glucoamylase a 57.9 4.6 0.0001 50.0 1.2 160 552-723 473-633 (805)
45 PRK10933 trehalose-6-phosphate 56.7 51 0.0011 40.2 9.8 132 377-516 31-202 (551)
46 PLN00196 alpha-amylase; Provis 56.6 92 0.002 36.7 11.5 60 378-439 43-112 (428)
47 COG1649 Uncharacterized protei 54.2 46 0.001 38.9 8.3 118 376-498 61-192 (418)
48 PRK03705 glycogen debranching 54.0 19 0.00042 44.6 5.7 91 420-515 243-337 (658)
49 PRK10265 chaperone-modulator p 52.0 24 0.00053 32.8 4.7 45 627-679 19-63 (101)
50 PF00128 Alpha-amylase: Alpha 49.5 36 0.00078 37.0 6.5 127 381-515 6-169 (316)
51 cd06416 GH25_Lys1-like Lys-1 i 48.2 22 0.00048 36.9 4.2 72 368-441 58-132 (196)
52 TIGR02104 pulA_typeI pullulana 46.5 26 0.00057 43.1 5.2 89 420-515 230-320 (605)
53 TIGR02102 pullulan_Gpos pullul 38.9 40 0.00086 44.3 5.2 85 421-515 557-643 (1111)
54 PRK14510 putative bifunctional 38.5 44 0.00095 44.6 5.6 91 420-514 248-342 (1221)
55 PLN02784 alpha-amylase 38.4 1.2E+02 0.0026 38.8 8.9 58 379-439 521-588 (894)
56 PHA02530 pseT polynucleotide k 36.8 2.1E+02 0.0045 31.5 10.0 45 396-440 159-211 (300)
57 COG2342 Predicted extracellula 34.7 1.8E+02 0.0039 32.2 8.5 108 392-518 41-150 (300)
58 cd04883 ACT_AcuB C-terminal AC 34.5 1E+02 0.0022 25.8 5.6 56 380-436 14-69 (72)
59 COG1523 PulA Type II secretory 33.8 62 0.0014 40.4 5.6 91 420-516 266-361 (697)
60 PF05691 Raffinose_syn: Raffin 33.4 1.3E+02 0.0028 37.7 8.2 71 336-406 156-239 (747)
61 PF09196 DUF1953: Domain of un 33.0 94 0.002 25.7 4.6 50 717-773 13-62 (66)
62 TIGR02100 glgX_debranch glycog 32.4 73 0.0016 39.9 6.0 92 420-516 246-343 (688)
63 PRK15447 putative protease; Pr 28.8 2E+02 0.0043 32.2 8.1 107 379-496 15-130 (301)
64 PF03537 Glyco_hydro_114: Glyc 27.4 94 0.002 27.2 4.2 35 393-442 25-59 (74)
65 PF13591 MerR_2: MerR HTH fami 27.0 97 0.0021 27.8 4.3 44 627-679 12-55 (84)
66 KOG0470 1,4-alpha-glucan branc 26.7 60 0.0013 40.2 3.7 74 420-499 312-396 (757)
67 PRK06769 hypothetical protein; 26.5 89 0.0019 31.7 4.5 47 394-440 3-52 (173)
68 PF01373 Glyco_hydro_14: Glyco 25.4 1.7E+02 0.0037 34.0 6.9 91 380-479 17-125 (402)
69 PF07485 DUF1529: Domain of Un 24.9 1.3E+02 0.0028 29.2 5.0 71 358-430 35-118 (123)
70 PLN02447 1,4-alpha-glucan-bran 24.8 68 0.0015 40.5 3.8 108 382-498 254-376 (758)
71 smart00642 Aamy Alpha-amylase 24.6 1.8E+02 0.0038 29.6 6.2 62 377-441 17-92 (166)
72 PLN03244 alpha-amylase; Provis 23.0 1E+02 0.0022 39.0 4.7 81 410-496 430-515 (872)
73 TIGR02103 pullul_strch alpha-1 22.9 1.1E+02 0.0023 39.6 5.0 88 420-514 405-496 (898)
74 PLN02960 alpha-amylase 22.4 1.2E+02 0.0025 39.0 5.1 112 377-497 414-541 (897)
75 COG0366 AmyA Glycosidases [Car 22.4 4.1E+02 0.009 31.2 9.8 130 377-514 27-198 (505)
76 PRK14706 glycogen branching en 21.6 84 0.0018 39.0 3.7 24 421-444 219-243 (639)
77 PRK12313 glycogen branching en 21.6 1.2E+02 0.0027 37.5 5.3 87 421-516 222-311 (633)
78 KOG0471 Alpha-amylase [Carbohy 21.4 1.7E+02 0.0036 35.8 6.1 124 391-516 50-215 (545)
79 PF12138 Spherulin4: Spherulat 21.3 1.3E+02 0.0028 32.9 4.8 92 344-449 55-157 (253)
80 TIGR01668 YqeG_hyp_ppase HAD s 20.9 1.4E+02 0.0031 30.1 4.8 44 393-440 23-67 (170)
81 TIGR02402 trehalose_TreZ malto 20.3 1E+02 0.0022 37.5 4.0 80 420-515 161-245 (542)
No 1
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7e-238 Score=1968.68 Aligned_cols=872 Identities=53% Similarity=0.994 Sum_probs=805.6
Q ss_pred CceeeccCcccccCCccccccccCCCC--CCceEEeceeEEcCCCcEEEEEecCCCCCCCCcceEEEEEEEEECCEEEEE
Q 002442 25 PVLSWKKDEFRNCNQTPFCKRARSRNP--FSCSLIANQVTISDDGDISAKLVPKNHDDHHQINPLILSLSIYQDGIVRLK 102 (921)
Q Consensus 25 ~~~~v~~~~fktC~qs~FC~R~R~~~~--~~y~~~~~sv~~~~~~~~~a~l~~~~~~~~~~~~~l~l~v~~~~~~~~Rv~ 102 (921)
+..||+|++||||+|||||||+|.+++ ..|++.++|++.. +++++|.|+++ .....|.|+|+.++++++||+
T Consensus 22 ~l~av~r~~FKtCeQs~FCkR~R~i~~~~~~y~l~~~si~~~-~~~l~a~l~~~-----~~~~~l~~sl~~Lkd~~vR~~ 95 (915)
T KOG1066|consen 22 ALGAVDRDNFKTCEQSGFCKRHRAITPSLTGYELLADSITHY-EDVLTANLINK-----QNKVLLPLSLSGLKDSTVRFQ 95 (915)
T ss_pred hhhhccHhhcccccccchhhhhhhhcCCCCceeeecccceec-CCceEEeeeec-----CCCceeeEEEEEecCceEEEE
Confidence 345899999999999999999999984 3699999999988 89999999987 334589999999999999999
Q ss_pred EecCCCCCCCCCcccccccccCCcccccceecccccccccCCCCCeeEeeCCCEEEEEEecCcEEEEEEecCCeEEEEec
Q 002442 103 IDEDPTLNPRKQRFQVPDVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLN 182 (921)
Q Consensus 103 I~~~~~~~~~~~Ry~vp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~v~~~~~~~~~~~~n 182 (921)
|||++. +.++||++|++++.+++...++.++.. ++..+++..+.+++|+|+.+||+++|++ ++++++++|
T Consensus 96 IDE~~~--~~rkRy~~~~~lv~~~~~~~~~~~~~~------~t~~~~~~~~g~~~vvv~~~PF~v~~~~--~~~lv~svN 165 (915)
T KOG1066|consen 96 IDEKES--ALRKRYQVPDALVSEPEEVRISVSKND------ETATKIVGTNGKYKVVVTAKPFRVDFFE--DDELVVSVN 165 (915)
T ss_pred ECCccc--ccccccCCchhhcCcchheeEEeeecC------CcccEEEEecCCeEEEEEeCCeEEEEEe--CCcEEEEEc
Confidence 999743 689999999999887765555444331 1234566666779999999999999999 789999999
Q ss_pred cCCCccccc---cccc--c-----hhhhhhccccCCCCCCCcceEEEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCc
Q 002442 183 SNGLFDFEE---KNEG--E-----EWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESE 252 (921)
Q Consensus 183 ~~~l~~~e~---~~~~--~-----~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~ 252 (921)
.+++|+||. |.++ + .|+|.|++++|+||+||+||++|++|++..++||++||+++|.||+|+|. ++
T Consensus 166 ~~~~L~fE~~r~K~~~~~e~~~~g~WeE~Fk~~~DskP~Gp~SVglD~sF~~~~~vyGIPEHA~s~~Lk~T~g~----~e 241 (915)
T KOG1066|consen 166 ARGLLNFEHFRTKEEGPEETDENGFWEETFKTHHDSKPHGPESVGLDFSFVGSKNVYGIPEHADSLRLKDTSGG----SE 241 (915)
T ss_pred ccceeehhhccccccCccccccccchhhhhhcccCCCCCCCceeEEeEEecccceeecCcccccceEeeccCCC----CC
Confidence 999999993 3333 1 39999999999999999999999999999999999999999999999863 68
Q ss_pred ceeeeeccccccCCCCCCCCccceeEEEEeCCCCceEEEEEecCcceEEEEcCCCCCcc-cccccC----CcccccceEE
Q 002442 253 PYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAE-SGILLP----SKQKRIDTFW 327 (921)
Q Consensus 253 ~y~l~n~D~~~~~~~~~~~lYg~~Pf~~~~~~~~~~~Gvf~~ns~~~~vdi~~~~~~~~-~~~~~~----~~~~~~~~~~ 327 (921)
||||||+|+|+|+.+++|+||||||||++|++ .++.|+||.|+++|||||..+..+.. ++...+ .+.+.++++|
T Consensus 242 PYRLyNlDVFEYe~~spmalYGSIP~m~ah~~-~r~~g~fW~NAAeTWVDi~~~t~~~~~s~~~~~~~~s~~~p~~~thw 320 (915)
T KOG1066|consen 242 PYRLYNLDVFEYELNSPMALYGSIPFMLAHGP-NRDVGIFWLNAAETWVDIQSSTTDGLFSKMVDPVSGSQKVPQTDTHW 320 (915)
T ss_pred ceeEeecceEEEecCCcchheecccEEEecCC-CCceeeEEecchhheEEeeccccccccccccccCCCCCCCCCcccee
Confidence 99999999999999999999999999999996 68999999999999999987765422 222222 2234568999
Q ss_pred EeecCeEEEEEEeCCCHHHHHHHHHHccCCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCC
Q 002442 328 MSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG 407 (921)
Q Consensus 328 ~s~~G~lD~y~f~G~~p~~v~~~Y~~ltG~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~ 407 (921)
+||+|++|.|+|+||+|.+|++||++|||+|+|||.+|+|||||||||++|++|.+|.++|++++||+|+|||||+|+|+
T Consensus 321 ~SEsGiiDvFi~lGP~~~Dv~~qyaaLTG~~~LPplFsiGYHQcRWNY~DE~DV~~Vd~~FDehdiP~DviWLDIEhtdg 400 (915)
T KOG1066|consen 321 MSESGIIDVFIFLGPKPSDVFRQYAALTGTTPLPPLFSIGYHQCRWNYNDEEDVLTVDQGFDEHDIPYDVIWLDIEHTDG 400 (915)
T ss_pred eccCCcEEEEEEeCCChhHHHHHHHhhcCCCCCCchhhcchhhccccccchhhhhhhhcCccccCCccceEEEeeeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCCh
Q 002442 408 KKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNP 487 (921)
Q Consensus 408 ~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp 487 (921)
|+|||||+.+||+|++|+++|.++|+|+|+|+|||||.|++|.+++|++++||+||+.+|++|+||||||++.||||+||
T Consensus 401 KrYFTWDk~~FP~P~~Ml~kLa~kgRklV~IvDPHIKkD~~Y~v~ke~~~~gy~VKd~~G~DyeG~CWPG~S~yiDf~nP 480 (915)
T KOG1066|consen 401 KRYFTWDKHKFPNPKDMLKKLASKGRKLVTIVDPHIKKDDGYFVHKEAKDKGYYVKDRDGSDYEGWCWPGSSSYIDFINP 480 (915)
T ss_pred ceeEeeccccCCCHHHHHHHHHhcCCceEEEeCcccccCCCeEEhHHhhhCCeEEEecCCCcccccccCCCcccccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcccccccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCC
Q 002442 488 EIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKD 567 (921)
Q Consensus 488 ~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~ 567 (921)
++|+||++++.+++|.|++.+.++||||||||+|+|||+|||+|++|+||+|||++||+||++.++||++||++|.+|++
T Consensus 481 ~~r~wW~~~fafd~y~g~t~nl~iWNDMNEPSVFnGPEiTm~kDaiHyGg~EHRdVHNiYG~~~h~aT~dGl~~R~~g~~ 560 (915)
T KOG1066|consen 481 EARKWWKSQFAFDRYEGSTPNLFIWNDMNEPSVFNGPEITMPKDAIHYGGWEHRDVHNIYGLMVHMATFDGLIARSGGKE 560 (915)
T ss_pred HHHHHHhhhcccccccCCCCceEEeccCCCccccCCCccccchhhhhcCCeeechhhhhhceeeeehhhhhhhhhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CCeEEeccccCCCCcccceecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccc
Q 002442 568 RPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRA 647 (921)
Q Consensus 568 RpfilsRs~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~ 647 (921)
||||||||+|||||||||+|||||.++|+|||.||||+|++|++||||+|||||||+||||+||++||||.|||+||||.
T Consensus 561 RPFvLsRafFaGsQR~aAiWTGDN~A~W~HLkiSiPM~Lsl~iaG~~F~GADVgGFFgNPd~ELlvRWYQ~gaf~PFFRa 640 (915)
T KOG1066|consen 561 RPFVLSRAFFAGSQRTAAIWTGDNTADWDHLKISIPMVLSLGIAGMPFVGADVGGFFGNPDPELLVRWYQTGAFQPFFRA 640 (915)
T ss_pred CceEEEeccccCccceeeeeccCCccchhhheeecceeEecccccceecccccccccCCCCHHHHHHHHHhcccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCcccccccccCCCCccccccCceeeecCceeEe
Q 002442 648 HAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQ 727 (921)
Q Consensus 648 H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~~~~qfm~G~~lLVa 727 (921)
|+|++++|||||+|+|+.++++|+||+.||+|||||||+|++++.+|.|||||||+|||+|++++++|+|||+|+.|||.
T Consensus 641 HAHiDTkRREPWLf~e~~~~iiRdal~~RY~lLP~wYTlFye~~~tG~PvmrPl~~e~peD~~~f~iD~Q~~vgsgLLVk 720 (915)
T KOG1066|consen 641 HAHIDTKRREPWLFPEQTTQIIRDALRTRYALLPYWYTLFYEHHVTGVPVMRPLFMEFPEDEELFEIDDQFMVGSGLLVK 720 (915)
T ss_pred hccccccccCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchhHhhCccchhhhcccceEEEccccEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCceEEEEEcCCC--ceeeEeecceEEeCCeEEEEEeecCccceeccCCeeeeccCCCCCccccccCCCeEEEEEe
Q 002442 728 GVYEERAKHISVYLPGK--ESWYDIRTGARVKGGVTHKLEVSEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVAL 805 (921)
Q Consensus 728 PV~~~g~~~~~vylP~~--g~Wyd~~tg~~~~gg~~~~v~~pl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~ 805 (921)
||+++|+..++||||.+ ..|||+.+++.+.|++++.|+|||++||||+|||+|||++++.|+++++|++||+||+||+
T Consensus 721 PV~e~g~~~v~vylP~g~~evwyd~~s~~~~~g~g~~~vpapl~~iPv~qrGGtIip~~~r~RRss~lm~~DP~tL~IAl 800 (915)
T KOG1066|consen 721 PVTEKGTSEVQVYLPRGKGEVWYDWVSGQEYRGPGTVYVPAPLTSIPVFQRGGTIIPTKDRIRRSSELMKNDPITLFIAL 800 (915)
T ss_pred ecccCCcceeEEEcCCCCccEEEEcccCceecCCCcEEecCcccccceeeeCceecchHHHHHHhHHhhccCCeEEEEEe
Confidence 99999999999999932 3899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEEEeCCCCcccCCCeEEEEEEEEECCeEEEEEecCC--CCCCCCCCceeEEEEEEEecCC-CceEEEccCC
Q 002442 806 NSSQAAEGQLYVDDGKSFDFLEGAFIHRRFVFSNGQLKSINMAPA--AGKSRFSSECIIERIILLGHGG-SKSAVIEPAN 882 (921)
Q Consensus 806 ~~~~~A~g~lY~DDG~s~~y~~g~y~~~~f~~~~~~l~~~~~~~~--~~~~~~~~~~~i~~i~i~g~~~-~~~~~v~~~~ 882 (921)
+.++.|+|+||+|||+|++|++|+|.+++|+|+++.+++-.+... .+.+.+...++||||+|.|... |.++.+...+
T Consensus 801 ~~~~~A~G~lYlDDG~tf~Yq~G~~~~~~F~f~~~~~~~~~l~~~~l~p~~~~~~~~~IerIvI~G~~~~p~~~~i~~~~ 880 (915)
T KOG1066|consen 801 DSQGNANGELYLDDGETFNYQRGQYVHRRFSFSNNSLNSASLVNENLDPEGKYATKNWIERIVIRGAESSPKIALITRIG 880 (915)
T ss_pred CCCCcccceEEecCCcccccccccEEEEEEEeccCccccceecCCCCCcccccccccceEEEEEeccccCCcceEEeecC
Confidence 999999999999999999999999999999999996553333222 2368888999999999999986 6666666555
Q ss_pred ceeeEeecceeEEEeccccEEEEecCccccCCCeEEEeC
Q 002442 883 QKAEIELGPLQLQGRHGRTVLTVRNPGVRISDDWTIKIL 921 (921)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~l~I~~~~~~~~~~w~i~~~ 921 (921)
.+.+ ...++++.++.+|+|+||++.|.+||+|+|.
T Consensus 881 ~~~~----~~~~~~d~~~~~l~IrkPg~~v~~d~~v~i~ 915 (915)
T KOG1066|consen 881 SPVQ----SLEFSHDHDTKVLVIRKPGAFVTSDWKVHIE 915 (915)
T ss_pred CCch----hceecccCCCceEEEecCCceeeeeeEEEeC
Confidence 5432 2467888889999999999999999999974
No 2
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=5.3e-146 Score=1318.27 Aligned_cols=604 Identities=31% Similarity=0.611 Sum_probs=545.1
Q ss_pred EEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCcceeeeeccccccCCCCCCCCccceeEEEEeCCCCceEEEEEecCc
Q 002442 218 FDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAA 297 (921)
Q Consensus 218 ~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYg~~Pf~~~~~~~~~~~Gvf~~ns~ 297 (921)
+.++++.++++|||||++++|+++ |+.++|||+|.++|..+ ..+||++|||+++++.++.+||||++|++
T Consensus 66 ~~~~l~~~e~~YGlGE~~g~L~rr---------G~~~~lwN~D~~gy~~~-~~~LY~siPf~l~~~~~g~~yGVf~dns~ 135 (978)
T PLN02763 66 VTFELPSGTSFYGTGEVSGPLERT---------GKRVYTWNTDAWGYGQN-TTSLYQSHPWVFVVLPNGEALGVLADTTR 135 (978)
T ss_pred EEEEcCCCCeEEeCCccCCccccC---------CcEEEEEECCCCccCCC-CCcccccEeEEEEEecCCcEEEEEEeCCC
Confidence 344567789999999999998874 56899999999888644 46899999999998655679999999999
Q ss_pred ceEEEEcCCCCCcccccccCCcccccceEEEeecCeEEEEEE-eC--CCHHHHHHHHHHccCCCCCCccccccccccccC
Q 002442 298 EMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFF-VG--PGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWN 374 (921)
Q Consensus 298 ~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f-~G--~~p~~v~~~Y~~ltG~p~lpP~walG~~qsrw~ 374 (921)
.++||+..+ ....|.+++ |+|++ .| ++|++|+++|++|||+|+|||+||||||||||+
T Consensus 136 ~~~fDlg~~----------------~~~~f~a~~---~y~~i~~G~gptp~eVi~~Yt~LTGrp~mpP~WALGy~qSR~~ 196 (978)
T PLN02763 136 RCEIDLRKE----------------SIIRIIAPA---SYPVITFGPFPSPEALLTSLSHAIGTVFMPPKWALGYQQCRWS 196 (978)
T ss_pred cEEEEEcCC----------------ceEEEEecC---ceEEEEecCCCCHHHHHHHHHHHhCCCCCCchHHhheeeccCC
Confidence 999999632 124566653 67765 56 799999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCCChhhhHH
Q 002442 375 YRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNE 454 (921)
Q Consensus 375 Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~~ 454 (921)
|.++++|++++++||+++||||+||+|||||+++++||||+++||||++|+++||++|+|+|+|+||+|+.+++|.+|++
T Consensus 197 Y~sq~eV~eva~~fre~~IP~DvIwlDidYm~g~~~FTwD~~rFPdP~~mv~~Lh~~G~kvv~iidPgI~~d~gY~~y~e 276 (978)
T PLN02763 197 YESAKRVAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERFPDPKGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDS 276 (978)
T ss_pred CCCHHHHHHHHHHHHHcCCCceEEEEehhhhcCCCceeECcccCCCHHHHHHHHHHCCCEEEEEEcCCCccCCCCHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred HHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecCCCCCccCCCccccCCCccc
Q 002442 455 ATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALH 534 (921)
Q Consensus 455 ~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h 534 (921)
+.++++|||+++|++|.|.||||.++|||||||+|++||.++++. +.. .+++|||+|||||++|++.+.+||.++.|
T Consensus 277 g~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~--l~d-~GVDG~W~DmnEPa~f~~~~~t~P~~~~h 353 (978)
T PLN02763 277 GCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKD--FVS-NGVDGIWNDMNEPAVFKTVTKTMPETNIH 353 (978)
T ss_pred HhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHH--Hhc-CCCcEEEccCCCCccccCCcCCCCccccc
Confidence 999999999999999999999999999999999999999998763 222 57899999999999999888899999998
Q ss_pred CCc------ccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCccchhHHHhhHHHHHHH
Q 002442 535 LDR------VEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTL 608 (921)
Q Consensus 535 ~~g------~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~ 608 (921)
.++ ..|+++||+||+++++|++++++++. .++|||+||||+|+|+|||+++|+|||.++|++|+.+|+++|++
T Consensus 354 ~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~-~~kRPFilTRSgfaGsQRYaa~WtGDn~SsWe~L~~sI~~~Lnl 432 (978)
T PLN02763 354 RGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLAN-KNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEHLHMSIPMVLQL 432 (978)
T ss_pred cCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhC-CCCCcEEEEccccCcCCCCceEECCCccCCHHHHHHHHHHHHHH
Confidence 763 26999999999999999999998875 45899999999999999999999999999999999999999999
Q ss_pred hccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHHH
Q 002442 609 GLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFR 688 (921)
Q Consensus 609 ~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~ 688 (921)
||||+||||+|||||.|++++|||+||+|+|||+||||+|+..++.+||||.|++++++++|+++++||+|||||||+++
T Consensus 433 gLSGipf~G~DIGGF~G~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~fgeev~~i~R~ai~LRYrLLPYiYSL~~ 512 (978)
T PLN02763 433 GLSGQPLSGPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEECEEVCRLALKRRYRLLPHFYTLFY 512 (978)
T ss_pred HhcCCcccccccCCCCCCCCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCeecChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcccccccccCCCCccccccCceeeecCceeEeee-eccCceEEEEEcCCCceeeEeecceEEeCCeEEEEEee
Q 002442 689 EANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGV-YEERAKHISVYLPGKESWYDIRTGARVKGGVTHKLEVS 767 (921)
Q Consensus 689 ~a~~~G~Pi~RPL~~efP~D~~~~~~~~qfm~G~~lLVaPV-~~~g~~~~~vylP~~g~Wyd~~tg~~~~gg~~~~v~~p 767 (921)
+|+++|.||||||||+||+|++++++++|||+|++|||||| +++++++|+|||| +|.||||++++...
T Consensus 513 eA~~tG~PImRPL~~efP~D~~a~~iddQFM~G~~LLVAPVv~~~g~tsr~VYLP-~G~WyDf~t~~~~~---------- 581 (978)
T PLN02763 513 KAHTTGLPVMTPIFFADPKDPSLRKVENSFLLGPLLISASTLPDQGSDNLQHVLP-KGIWQRFDFDDSHP---------- 581 (978)
T ss_pred HHHhhCCceeeceecCCCCChHHhccCceEEEcCCeEEcceeccCCceEEEEECC-CCcEEecCCCCccc----------
Confidence 99999999999999999999999999999999999999998 5789999999999 78999999987421
Q ss_pred cCccceeccCCeeeeccCCCCCccccccCCCeEEEEEeCCCcceEEEEEEeCCCCcccCCCeEEEEEEEEECC--eEEEE
Q 002442 768 EESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSSQAAEGQLYVDDGKSFDFLEGAFIHRRFVFSNG--QLKSI 845 (921)
Q Consensus 768 l~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~~~A~g~lY~DDG~s~~y~~g~y~~~~f~~~~~--~l~~~ 845 (921)
+.+|||||+|+|||+++....+......++++|.|+++.+++|+|+||+|||+|++|++|+|..+.|+++.. .++..
T Consensus 582 -~~pplfVR~GsIIPl~~~~~~~~e~~~~~~l~L~V~~~~~g~a~g~LYeDDG~s~~Ye~G~y~~~~f~~~~~~~~~~i~ 660 (978)
T PLN02763 582 -DLPLLYLQGGSIIPLGPPIQHVGEASLSDDLTLLIALDENGKAEGVLYEDDGDGFGYTKGDYLLTHYEAELVSSEVTVR 660 (978)
T ss_pred -CCccEEEeCCEEEEeccccccccccccCCceEEEEccCCCCcEEEEEEEcCCCcccccCCcEEEEEEEEEeCCCEEEEE
Confidence 345799999999999986655555556799999999999999999999999999999999999999999743 44433
Q ss_pred EecCCCCCCCCCCceeEEEEEEEe
Q 002442 846 NMAPAAGKSRFSSECIIERIILLG 869 (921)
Q Consensus 846 ~~~~~~~~~~~~~~~~i~~i~i~g 869 (921)
.. ...|.|....+--+|+++.
T Consensus 661 i~---~~~G~y~~~~r~~~v~l~~ 681 (978)
T PLN02763 661 VA---STEGSWKRPKRRLHVRLLL 681 (978)
T ss_pred Ec---ccCCCCCCccceEEEEEEC
Confidence 22 2357777665555666653
No 3
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-139 Score=1216.22 Aligned_cols=736 Identities=31% Similarity=0.574 Sum_probs=633.7
Q ss_pred ccCCcc-ccccccCCCC-------CCceEEeceeEEcCCCcEEEEEecC-C--CCCCCCcceEEEEEEEEECCEEEEEEe
Q 002442 36 NCNQTP-FCKRARSRNP-------FSCSLIANQVTISDDGDISAKLVPK-N--HDDHHQINPLILSLSIYQDGIVRLKID 104 (921)
Q Consensus 36 tC~qs~-FC~R~R~~~~-------~~y~~~~~sv~~~~~~~~~a~l~~~-~--~~~~~~~~~l~l~v~~~~~~~~Rv~I~ 104 (921)
.|+++. ||....+... ..|+|.+.++++. .++++|+|.+. + +.++.+...+.+++.+.+.+++|++|+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~g~gY~~~~~~~~-t~~~~a~l~~~~~~~~~~~~d~~~~~l~~~~~T~~r~~i~i~ 111 (805)
T KOG1065|consen 33 SCERRYKCPTSPYKIVLFPWCRFLIGYGYQAESMQVS-TSGQTAKLNNLDPSNPIYGTDIKSLLLTVSYETVERLHIKIT 111 (805)
T ss_pred hhhhceeecCCCcCcccceeEEeecCCceEEEecccc-cceEEEEeeccCCCcccccCCccceEeeeecccceeeEEeec
Confidence 377555 5555544211 2477888887776 55999999875 3 347899999999999999999999999
Q ss_pred cCCCCCCCCCcccccccccCCcccccceecccccccccCCCCCeeEeeCCCEEEEEEecCcEEEEEEecCCeEEEEeccC
Q 002442 105 EDPTLNPRKQRFQVPDVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLNSN 184 (921)
Q Consensus 105 ~~~~~~~~~~Ry~vp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~v~~~~~~~~~~~~n~~ 184 (921)
+ .+.+||++|...+.+... +. .+..+..+.+||++.+.|+++|++.+... -
T Consensus 112 d-----~~~~r~e~p~~~~~~~~~------~s-----------------~~~~~~~s~~pF~f~v~R~s~g~~lfdTs-~ 162 (805)
T KOG1065|consen 112 D-----LNNQRWEVPHVTIRRVEG------RS-----------------HNSPVSFSTGPFSFSVTRWSDGRVLFDTS-I 162 (805)
T ss_pred C-----cCCCceecccccccceec------cc-----------------cCCCcccccCCeEEEEEEecCCceeeecC-C
Confidence 8 589999999865443110 00 00116668899999999999988654432 2
Q ss_pred CCcccccccccchhhhhhccccCCCCCCCcceEEEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCcceeeeecccccc
Q 002442 185 GLFDFEEKNEGEEWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEY 264 (921)
Q Consensus 185 ~l~~~e~~~~~~~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~~ 264 (921)
+.+.|+ |||++.+. .+|+...+||+|||...--++.. ++++|.||++|...-
T Consensus 163 ~~liF~---------DQflqlsT-------------~LPs~~~iyG~gE~~~~~~~~~~------~~~t~~l~~rd~~p~ 214 (805)
T KOG1065|consen 163 GPLIFE---------DQFLQLST-------------YLPSENEIYGLGEHTHQSYRHDM------NNLTWTLFARDYSPN 214 (805)
T ss_pred Cceeee---------eeeeeeec-------------cCCCcccccccccccchhhhccc------CCceeeeeecccCCC
Confidence 334555 57765444 34544449999998654323333 367999999998752
Q ss_pred CCCCCCCCccceeEEEEeCCCCceEEEEEecCcceEEEEcCCCCCcccccccCCcccccceEEEeecCeEEEEEEeCCCH
Q 002442 265 LHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGP 344 (921)
Q Consensus 265 ~~~~~~~lYg~~Pf~~~~~~~~~~~Gvf~~ns~~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p 344 (921)
....+|||+|||||..+..+.++|||++||++|+|.+. +.+.+.|+++||++|+|+|+||+|
T Consensus 215 --~~~~NLYGshPfymcle~~~~~~GVflLnSNamEv~~~----------------p~p~L~YR~iGGilD~y~flGptP 276 (805)
T KOG1065|consen 215 --LPGVNLYGSHPFYLCLEDDSGAHGVFLLNSNAMEVTLR----------------PGPSLTYRTIGGILDFYVFLGPTP 276 (805)
T ss_pred --CCcccccccccceeEeeccCCCceEEEeccCCceEEec----------------cCCeeEEEeecceEEEEEecCCCh
Confidence 34568999999999998778889999999999999884 345689999999999999999999
Q ss_pred HHHHHHHHHccCCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHH
Q 002442 345 KDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEM 424 (921)
Q Consensus 345 ~~v~~~Y~~ltG~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m 424 (921)
+.|++||.+++|+|.|||+|+||||+|||+|.+.+++++|+++++++|||+|++|.|||||+++++||.|+.+||+.+++
T Consensus 277 e~vvqQy~q~iG~P~m~pYWslGf~~~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~ykDFTvd~~~fp~~~~f 356 (805)
T KOG1065|consen 277 EGVVQQYLQLIGRPAMPPYWSLGFQLCRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGYKDFTVDKVWFPDLKDF 356 (805)
T ss_pred HHHHHHHHHHhCCccCCchhhccceecccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhcccceeeccccCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCC-eeeeeeCCccccccCCChhHHHHHhhhccccccc
Q 002442 425 QRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRD-YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYV 503 (921)
Q Consensus 425 ~~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~-~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~ 503 (921)
++.||++|+|+|+|+||+|..+..|..|++|.+++++|++..|+. +.|.+|||.++||||+||++..||.++++ .++
T Consensus 357 v~~Lh~~G~kyvliidP~is~~~~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~~Ww~~~~~--~fh 434 (805)
T KOG1065|consen 357 VDDLHARGFKYVLIIDPFISTNSSYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVVEWWLDELK--RFH 434 (805)
T ss_pred HHHHHhCCCeEEEEeCCccccCccchhhhhhhhhceeeecccCchhhhcccCCCcccccccCCchHHHHHHHHHH--hhc
Confidence 999999999999999999999988999999999999999999998 99999999999999999999999999986 566
Q ss_pred CCcCcceEeecCCCCCccCCCccccCCCcccCCcc--cchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCC
Q 002442 504 GSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRV--EHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQ 581 (921)
Q Consensus 504 g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~--~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsq 581 (921)
...++||+|+||||+++|..|- ..+..+.+.. ..++.||+||+.++.|++.++.+.. ++|+|+++||+|+|++
T Consensus 435 ~~vp~dg~wiDmnE~snf~~pp---~~~~~~~~~~~~~tyd~~~lyg~~~aiat~~a~~~v~--~kr~~i~srsTf~g~g 509 (805)
T KOG1065|consen 435 DEVPFDGFWIDMNEPSNFPSPP---INPTLDNGDLYAKTYDTHNLYGYSEAIATHQALVDVP--GKRSFILSRSTFVGSG 509 (805)
T ss_pred ccCCccceEEECCCcccCCCCC---cccccccccccccchhhhhhHhHHHhhhhhccceecc--ccccccccccceeccc
Confidence 7788999999999999998532 1122222221 1278999999999999999998885 4999999999999999
Q ss_pred cccceecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCcccc
Q 002442 582 RYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLF 661 (921)
Q Consensus 582 ry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~ 661 (921)
||++||+|||.++|+.|+.+|++||.++++|+|++|+|||||.|.++||||.||+|+|||+||||+|+..+..+|||+.|
T Consensus 510 ~y~~hwlgdn~~~w~~L~~sI~gml~fnl~Gip~Vg~Dicgf~~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~ 589 (805)
T KOG1065|consen 510 RYAGHWLGDNTARWEDLQTSISGMLEFNLFGIPMVGSDICGFLGPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTW 589 (805)
T ss_pred ccceeecccccceehhccccchhhhcccccCCCccchhhhcCCCCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCcccccccccCCCCccccccCceeeecCceeEeeeeccCceEEEEEc
Q 002442 662 GERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYL 741 (921)
Q Consensus 662 ~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vyl 741 (921)
+. +.++.|+++-+||++|||+||++++||..|.||+||||++||+|++++.+++|||+|++||||||+++|+++|++||
T Consensus 590 ~s-v~~a~r~~~~~ry~~lP~lytl~~~A~~sG~pV~RPlf~~fP~D~~~~~v~~qFl~G~~llvaPvl~~g~~~v~~y~ 668 (805)
T KOG1065|consen 590 SS-VAEAARNALTLRYTLLPYLYTLFYRAHVSGEPVARPLFFEFPTDPATLIVSDQFLWGESLLVAPVLYQGATEVEAYL 668 (805)
T ss_pred HH-HHHHHHHhhhheeeehhhHHHhhhhhhhcCCcceeeeeeecCCChhhhcccceeEeccccccccchhcCceEEEEEc
Confidence 76 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEeecceEEeCCeE-EEEEeecCccceeccCCeeeeccCCCCCccccccCCCeEEEEEeCCCcceEEEEEEeCC
Q 002442 742 PGKESWYDIRTGARVKGGVT-HKLEVSEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSSQAAEGQLYVDDG 820 (921)
Q Consensus 742 P~~g~Wyd~~tg~~~~gg~~-~~v~~pl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~~~A~g~lY~DDG 820 (921)
| .|.|||.+++....+.++ ++..+|+++||+|+|+|.|||+|. +.|+||++.++ |+|+||+|||
T Consensus 669 P-~g~Wyd~~~~~~~~~~~~~~~~~~p~d~i~v~~r~g~ilp~q~-------------~~l~~a~~~~~-a~g~l~~ddg 733 (805)
T KOG1065|consen 669 P-QGVWYDGFDGSYRVGSKWMVTYAAPLDKIPVFLRGGYILPMQQ-------------FELLVALDENG-ASGELYWDDG 733 (805)
T ss_pred c-CceeeecCCcceEeeeecccccCCchhhccchhccCceeeecc-------------cceeeeeccCC-cceeeecCCC
Confidence 9 899999999998888876 467899999999999999999986 78999999999 9999999999
Q ss_pred CCcccCCCeEEEEEEEEECCeEEEEEecCCCCCCCCCCceeEEEEEEEecCCCceEEEccCCce
Q 002442 821 KSFDFLEGAFIHRRFVFSNGQLKSINMAPAAGKSRFSSECIIERIILLGHGGSKSAVIEPANQK 884 (921)
Q Consensus 821 ~s~~y~~g~y~~~~f~~~~~~l~~~~~~~~~~~~~~~~~~~i~~i~i~g~~~~~~~~v~~~~~~ 884 (921)
++.+ .++.+. |.++.+ +.+.+. .+.+... .+++|+|+| ++..++. .||+.
T Consensus 734 e~~~-~~~~~~---f~~~~~-~~~~~~-----~~~~~~~-~~~~v~ilg-~~~~~~~--~ng~~ 783 (805)
T KOG1065|consen 734 ETLE-AGGGYS---FSFSST-LLSNVK-----EGKYAES-TLDKVTILG-PNFSSFT--LNGSP 783 (805)
T ss_pred cchh-cCCCcE---EEEeee-eEEEee-----ccccccc-cceEEEEec-CCcceEE--ECCeE
Confidence 9999 777775 777666 333332 3445444 899999999 4444444 34443
No 4
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-138 Score=1243.00 Aligned_cols=585 Identities=40% Similarity=0.737 Sum_probs=545.7
Q ss_pred CCcceEEEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCcceeeeeccccccCCCCCCCCccceeEEEEeCCCCceEEE
Q 002442 212 GPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGF 291 (921)
Q Consensus 212 gp~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYg~~Pf~~~~~~~~~~~Gv 291 (921)
|++++...+.+...+++||+|||+.++... +++|++||.|+.++...+.+++|.+||||++.+ ++|+
T Consensus 139 ~~~~~~~~~~~~~~e~~yGlge~~~~l~~~---------~~~~~~wn~D~~~~~~~~~~~~y~~iPf~~s~~----gyg~ 205 (772)
T COG1501 139 GGGYVFLYFDLGGGEHVYGLGERAGGLGRN---------GQTYRLWNADAGTYTGGDYDNLYASIPFYLSSR----GYGL 205 (772)
T ss_pred CCccEEEEEEecCCceEeeccccccccccC---------cceEEeeecCCCcccccccccccccCCEEEEcc----ceEE
Confidence 567899999999999999999999998532 568999999999998888899999999999974 7999
Q ss_pred EEecCcceEEEEcCCCCCcccccccCCcccccceEEEeecCeEEEEEEeCCCHHHHHHHHHHccCCCCCCcccccc-ccc
Q 002442 292 FWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIA-YHQ 370 (921)
Q Consensus 292 f~~ns~~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p~~v~~~Y~~ltG~p~lpP~walG-~~q 370 (921)
||+|++.+.||++.. ......|.+++|.|||||+.|+++++|+++|++|||||+|||+|||| +|+
T Consensus 206 ~~~n~~~~~fd~~~~--------------~~~~~~~~~e~~~ldyyv~~G~~~~~vi~~yt~lTGkp~l~P~Wa~G~~~~ 271 (772)
T COG1501 206 FVDNSAYGSFDVGSE--------------EYSYVQFSVEGGQLDYYVIAGPTPKDVLEKYTDLTGKPPLPPKWALGWLWT 271 (772)
T ss_pred EEECCCceEEEcCCc--------------ceEEEEEEecCCcEEEEEEeCCCHHHHHHHHHHhhCCCCCCCceecCCCce
Confidence 999999999999742 23346778899999999999999999999999999999999999999 999
Q ss_pred cccCCCCHHHHHHHHHhcccCCCCceEEEeecc-ccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCCCh
Q 002442 371 CRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIE-HTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSY 449 (921)
Q Consensus 371 srw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid-~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~y 449 (921)
||+.|.+|++|.++++.+++++||||+||||++ ||+.+++|+||+.+||+|++|+++||++|+|+++||+|+|+.++
T Consensus 272 ~~~~~~~e~~v~~~i~~~~~~~IP~d~~~lD~~~~~~~~~~F~wd~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~d~-- 349 (772)
T COG1501 272 SRYTYYDEDEVLEFIDEMRERDIPLDVFVLDIDFWMDNWGDFTWDPDRFPDPKQMIAELHEKGIKLIVIINPYIKQDS-- 349 (772)
T ss_pred eccccccHHHHHHHHhhcccccCcceEEEEeehhhhccccceEECcccCCCHHHHHHHHHhcCceEEEEeccccccCC--
Confidence 999999999999999999999999999999998 99999999999999999999999999999999999999999987
Q ss_pred hhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhh-hcccccccCCcCcceEeecCCCCCccCCCcccc
Q 002442 450 WLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT-KFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTM 528 (921)
Q Consensus 450 ~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~-~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~ 528 (921)
++|++++++|||||+++|..+.+.+|||.++++|||||+||+||++ ..+ .....++++||+|||||+.|++.
T Consensus 350 ~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~---~l~d~Gv~g~W~D~nEp~~~~~~---- 422 (772)
T COG1501 350 PLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKK---NLLDLGVDGFWNDMNEPEPFDGD---- 422 (772)
T ss_pred chHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHh---HHHhcCccEEEccCCCCcccccc----
Confidence 7899999999999999999999999999999999999999999995 322 22336789999999999998764
Q ss_pred CCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCccchhHHHhhHHHHHHH
Q 002442 529 PRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTL 608 (921)
Q Consensus 529 ~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~ 608 (921)
.+++|..|+++||+|++++++|+|+|+++.. +++|||+||||+|+|+|||+++|+||+.++|++|+.||+++|++
T Consensus 423 ----~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~-~~~r~~~lsRsg~aG~Q~~~~~WsGD~~s~wd~l~~si~~~Ls~ 497 (772)
T COG1501 423 ----GFGNGIDHEEMHNLYPLLYAKAVYEALKELG-GNERPFILSRSGYAGSQRYAAHWSGDNRSSWDSLRESIPAGLSL 497 (772)
T ss_pred ----ccccccCHHHHhcchhHHHHHHHHHHHHhhc-CCCceEEEEecccccceeccceeCCccccchHHHHhhHHhhhch
Confidence 5778889999999999999999999999886 56999999999999999999999999999999999999999999
Q ss_pred hccCCCccccCCCCCCC--CCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHH
Q 002442 609 GLTGMSFSGADVGGFFG--NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTL 686 (921)
Q Consensus 609 ~l~G~p~~G~DigGF~g--~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~ 686 (921)
||+|+||||+|||||.| +|++|||+||+|+|+|+|+||.|++ ++++||||.|++++.+++|+++++||+|||||||+
T Consensus 498 ~~sGi~~wg~DiGGF~g~~~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~~~lR~~LlPYiYt~ 576 (772)
T COG1501 498 SLSGIPFWGHDIGGFTGGDDPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREYIQLRYRLLPYIYTL 576 (772)
T ss_pred hccCCccccccccccCCCCCCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHHHHHHHccchHHHHH
Confidence 99999999999999999 7899999999999999999999998 78999999999999999999999999999999999
Q ss_pred HHHHHHcCCcccccccccCCCCccccccCceeeecCceeEeeeeccCceEEEEEcCCCceeeEeecceEEeCCeEEEEEe
Q 002442 687 FREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVKGGVTHKLEV 766 (921)
Q Consensus 687 ~~~a~~~G~Pi~RPL~~efP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~tg~~~~gg~~~~v~~ 766 (921)
+.+|+++|.|||||||++||+|++++++++|||+|++||||||+++|+++|+|||| +|.|||||||+.++||+++++.|
T Consensus 577 ~~~a~~tG~P~mRplf~~fp~D~~~~~iddqym~G~~lLVAPV~~eg~~~r~vyLP-~g~W~d~~tg~~~~Gg~~i~~~a 655 (772)
T COG1501 577 AAEASETGLPMMRPLFLEFPEDETTYNLDDQYMFGDDLLVAPVVEEGQTSREVYLP-EGTWYDFWTGEEYEGGQTITVEA 655 (772)
T ss_pred HHHHhccCCcceehhheeCCCChhhhhcccceecccceEEeeccccCcceEEEECC-CceEEEccCCCEEeCCeeEEEec
Confidence 99999999999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred ecCccceeccCCeeeeccCCCCCccccccCCCeEEEEEeCCCcceEEEEEEeCCCCcccCCCeEEEEEEEEECCe
Q 002442 767 SEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSSQAAEGQLYVDDGKSFDFLEGAFIHRRFVFSNGQ 841 (921)
Q Consensus 767 pl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~~~A~g~lY~DDG~s~~y~~g~y~~~~f~~~~~~ 841 (921)
|+++||||||+|+|||++....+. .....++..+.|++..++ |++.+|.|||+++.|++|.|....++++...
T Consensus 656 pl~~iPvfvR~Gsiip~~~~~~~~-~~~~~~~~~~~v~~~~~~-~~~~~y~ddG~~~~~~~~~~~~~~~~~~~~~ 728 (772)
T COG1501 656 PLETIPVFVRAGSIIPLLENELYV-GESYVEDVAFDVFPGQDG-ASGELYDDDGESFAYEKGEYTDSKITVSNTK 728 (772)
T ss_pred CccCCceEEecCceeecccchhhc-cccccCCceEEEEeccCC-ceEEEEccCCeEEEEEeeeeecceEEEEccc
Confidence 999999999999999999865543 344455677777776666 9999999999999999999999999887654
No 5
>PRK10658 putative alpha-glucosidase; Provisional
Probab=100.00 E-value=2.9e-133 Score=1195.66 Aligned_cols=651 Identities=24% Similarity=0.426 Sum_probs=547.6
Q ss_pred cccccCCCCCCceEEeceeEEcCCCcEEEEEecC-CCCCCC--CcceEEEEEEEEECCEEEEEEecCCCCCCCCCccccc
Q 002442 43 CKRARSRNPFSCSLIANQVTISDDGDISAKLVPK-NHDDHH--QINPLILSLSIYQDGIVRLKIDEDPTLNPRKQRFQVP 119 (921)
Q Consensus 43 C~R~R~~~~~~y~~~~~sv~~~~~~~~~a~l~~~-~~~~~~--~~~~l~l~v~~~~~~~~Rv~I~~~~~~~~~~~Ry~vp 119 (921)
||..|.--...|...+..+++. +..+++..-.+ ...-|+ +...+.++|+...+++|||++..........+.|.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iirV~~~~~~~~~~~~~~~~~~ 85 (665)
T PRK10658 7 NWLIRPGLNLIHPVQVYDVEQQ-DNELVVYAPPRDVRERGDTLDTPLFTIRFSSPQEGVIGVRIEHFQGALDNGPHFPLN 85 (665)
T ss_pred eeecCCCccccChhheeEEEEc-CCEEEEEecceEcCCcccccCCCeEEEEEEeccCCeEEEEEECCCCccCCCCCceec
Confidence 4555544333454555555565 55555443211 111111 3346788899999999999998421100123455543
Q ss_pred ccccCCcccccceecccccccccCCCCCeeEeeCCCEEEEEEec-CcEEEEEEecCCeEEEEeccCCCcccccccccchh
Q 002442 120 DVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRHD-PFEVYVRYKGGNSRVLSLNSNGLFDFEEKNEGEEW 198 (921)
Q Consensus 120 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~-PF~i~v~~~~~~~~~~~~n~~~l~~~e~~~~~~~~ 198 (921)
.. ......+.+. +..+++.+.+++++|+++ ||+|+|++ +|++++....+++ .+...
T Consensus 86 ~~-----~~~~~~i~~~---------~~~~~i~s~~l~v~i~~~~~~~i~~~~--~g~~l~~~~~~~~-~~~~~------ 142 (665)
T PRK10658 86 IL-----QDVKVEIEET---------EDYAELKSGNLSARVSKGEFWSLDFLR--NGRRLTGSQLKSN-GYVQD------ 142 (665)
T ss_pred cC-----CCCceEEEEc---------CCEEEEEeCCEEEEEEcCCCeEEEEEE--CCeEEeeccCccc-ceeec------
Confidence 21 1111122211 245666778899999976 99999996 6665443222221 11100
Q ss_pred hhhhccccCCCCCCCcceEEEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCcceeeeeccccccCCCCCCCCccceeE
Q 002442 199 EERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPF 278 (921)
Q Consensus 199 ~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYg~~Pf 278 (921)
..|...+...+.+..+|++|||||+++.|+++ |+.++|||+|.. .+..++|++|||
T Consensus 143 -----------~~~~~~~~~~~~l~~~E~~yGlGE~~~~l~~~---------G~~~~~wn~D~~----~~~~~~Y~~iPf 198 (665)
T PRK10658 143 -----------NDGRNYMREQLDLGVGETVYGLGERFTAFVKN---------GQTVDIWNRDGG----TSSEQAYKNIPF 198 (665)
T ss_pred -----------CCCcEEEEEEEecCCCCeEECCCccCCccccC---------CcEEEEEECCCC----CCCccccccccE
Confidence 01112467777788899999999999998753 568999999963 234689999999
Q ss_pred EEEeCCCCceEEEEEecCcceEEEEcCCCCCcccccccCCcccccceEEEeecCeEEEEEEeCCCHHHHHHHHHHccCCC
Q 002442 279 MISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMP 358 (921)
Q Consensus 279 ~~~~~~~~~~~Gvf~~ns~~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p~~v~~~Y~~ltG~p 358 (921)
+++++ +|||||+|++.+.||++.+ ....+.+.+++|.||+||+.|++|++|+++|++|||+|
T Consensus 199 ~~s~~----gyGvf~dn~~~~~fd~g~~--------------~~~~~~~~~~g~~ldyy~~~G~tp~~v~~~Yt~LTGrp 260 (665)
T PRK10658 199 YLTNR----GYGVFVNHPQCVSFEVGSE--------------KVSKVQFSVEGEYLEYFVIDGPTPKEVLDRYTALTGRP 260 (665)
T ss_pred EEecC----cEEEEEcCCCceEEEEecC--------------ccceEEEEecCCcEEEEEEeCCCHHHHHHHHHHHhCCC
Confidence 99875 7999999999999999743 12346788899999999999999999999999999999
Q ss_pred CCCccccccccccc-cCC-CCHHHHHHHHHhcccCCCCceEEEeeccccCCC--cceeeCCCCCCChHHHHHHHHHcCCe
Q 002442 359 SMPPLFSIAYHQCR-WNY-RDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGK--KYFTWDRLSFPHPEEMQRKLATKGRH 434 (921)
Q Consensus 359 ~lpP~walG~~qsr-w~Y-~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~--~~Ftwd~~~FPdp~~m~~~L~~~G~k 434 (921)
+|||+||||||||| |.+ .++++|++++++|++++||||+||+|++||++. ++|+||+++||||++|+++||++|+|
T Consensus 261 ~lpP~WalG~w~s~~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~~w~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k 340 (665)
T PRK10658 261 ALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERDLPLHVFHFDCFWMKEFQWCDFEWDPRTFPDPEGMLKRLKAKGLK 340 (665)
T ss_pred CCCchhhhheeeecccccCCCHHHHHHHHHHHHHcCCCceEEEEchhhhcCCceeeeEEChhhCCCHHHHHHHHHHCCCE
Confidence 99999999999999 433 468899999999999999999999999999874 69999999999999999999999999
Q ss_pred EEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeec
Q 002442 435 MVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWND 514 (921)
Q Consensus 435 ~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~D 514 (921)
+++|++|+|+.+ +++|+||+++|+|||+++|+++.+.+|||.+++||||||+|++||.++++.. . ..++++||+|
T Consensus 341 ~~~~i~P~i~~~--s~~f~e~~~~gy~vk~~~G~~~~~~~W~g~~~~~Dftnp~ar~W~~~~~~~l--~-d~Gvdgfw~D 415 (665)
T PRK10658 341 ICVWINPYIAQK--SPLFKEGKEKGYLLKRPDGSVWQWDKWQPGMAIVDFTNPDACKWYADKLKGL--L-DMGVDCFKTD 415 (665)
T ss_pred EEEeccCCcCCC--chHHHHHHHCCeEEECCCCCEeeeeecCCCceeecCCCHHHHHHHHHHHHHH--H-hcCCcEEEec
Confidence 999999999864 5899999999999999999999999999999999999999999999988642 2 2468999999
Q ss_pred CCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCccc
Q 002442 515 MNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAE 594 (921)
Q Consensus 515 mnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s~ 594 (921)
|||+ +|.|+.|++|..|+++||+|++++++|+++++++.. +++|||+|+||+++|+|||+++|+|||.++
T Consensus 416 ~gE~---------~p~d~~~~~G~~~~~~hN~Y~~l~~ka~~e~l~~~~-~~~r~~i~tRs~~aGsQry~~~WsGD~~st 485 (665)
T PRK10658 416 FGER---------IPTDVVWFDGSDPQKMHNYYTYLYNKTVFDVLKETR-GEGEAVLFARSATVGGQQFPVHWGGDCYSN 485 (665)
T ss_pred CCce---------eeccceecCCCcHHHhcchhHHHHHHHHHHHHHHhc-CCCceEEEEecccCCCCCCCCEECCCCCCC
Confidence 9994 678999999999999999999999999999998875 568999999999999999999999999999
Q ss_pred hhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHH
Q 002442 595 WEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIH 674 (921)
Q Consensus 595 W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~ 674 (921)
|++|+.+|+++|++||||+||||+|||||.|+|++|||+||+|+|+|+|+||+|+.. ..||||.|++++.+++|++++
T Consensus 486 w~~l~~si~~~Ls~glsG~~~~g~DIGGF~g~~~~ELy~RW~Q~g~f~P~~R~Hg~~--~~~ePW~fg~e~~~i~r~~i~ 563 (665)
T PRK10658 486 YESMAESLRGGLSLGLSGFGFWSHDIGGFENTATADVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDEEAVDVVRFFTK 563 (665)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCccCCCCCCCCHHHHHHHHHhcccChhhcccCCC--CCcCCcccCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999864 469999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHcCCcccccccccCCCCccccccCceeeecCceeEeeeeccCceEEEEEcCCCceeeEeecce
Q 002442 675 VRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGA 754 (921)
Q Consensus 675 lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~tg~ 754 (921)
+||+|||||||++++||++|.||||||++|||+|++++++++|||+|++||||||+++++ +|+|||| +|.|||||||+
T Consensus 564 lRy~LlPYlYs~~~~a~~~G~PimRPL~~efP~D~~~~~~~~qfmlG~~lLVAPV~~~~~-~r~VYLP-~G~W~d~~tg~ 641 (665)
T PRK10658 564 LKCRLMPYLYREAAEAHERGTPMMRAMVLEFPDDPACDYLDRQYMLGDSLLVAPVFSEAG-DVEYYLP-EGRWTHLLTGE 641 (665)
T ss_pred HHHHHHHHHHHHHHHHHhhCCccccchhccCCCChHHhcCCCceEecCCeEEeEeecCCc-eEEEEcC-CCeEEEccCCc
Confidence 999999999999999999999999999999999999999999999999999999999996 7999999 78999999999
Q ss_pred EEeCCeEEEEEeecCccceeccCC
Q 002442 755 RVKGGVTHKLEVSEESVPAFQRPG 778 (921)
Q Consensus 755 ~~~gg~~~~v~~pl~~iPvfvR~G 778 (921)
.++||+++++++|+++||||||+|
T Consensus 642 ~~~Gg~~i~~~~~l~~iPvfvR~G 665 (665)
T PRK10658 642 EVEGGRWHKEQHDFLSLPLLVRPN 665 (665)
T ss_pred EEECCEEEEEeCCCccCCEEEcCC
Confidence 999999999999999999999998
No 6
>PRK10426 alpha-glucosidase; Provisional
Probab=100.00 E-value=6e-123 Score=1104.83 Aligned_cols=537 Identities=23% Similarity=0.379 Sum_probs=473.5
Q ss_pred CCCCCCcceEEEEEecCCCceeeCCCCCCCCCCCCCCC------CCCCC-CcceeeeeccccccCCCCCCCCccceeEEE
Q 002442 208 TRPYGPQSISFDVSFYDSDYVYGIPERATSFALKPTRG------PNVEE-SEPYRLFNLDVFEYLHDSPFGLYGSIPFMI 280 (921)
Q Consensus 208 ~~p~gp~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g------~~~~~-~~~y~l~n~D~~~~~~~~~~~lYg~~Pf~~ 280 (921)
..|..-..+.+.+.+..+|++|||||++..|++++.+- ++..+ .++|+.|+.|...+..++.+++|++|||||
T Consensus 64 ~~~~~~~~~~~~~~~~~~E~~yGlGE~~~~l~~rG~~~~~w~~d~~~g~~~~~~~~~~~d~~~~~gg~~~~tY~~iPf~i 143 (635)
T PRK10426 64 KIALTDNRIWLRLAADPDEHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTYFPQPTFV 143 (635)
T ss_pred eecccCcEEEEEEecCCCCeEECCCcCCChHhhCCCEEeeeecccccCcCccccccccccccccccCccccccceeCEEE
Confidence 44566678999999999999999999999999874320 00001 134455555555555556678999999999
Q ss_pred EeCCCCceEEEEEecCcceEEEEcCCCCCcccccccCCcccccceEEEeecCeEEEEEEeCCCHHHHHHHHHHccCCCCC
Q 002442 281 SHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSM 360 (921)
Q Consensus 281 ~~~~~~~~~Gvf~~ns~~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p~~v~~~Y~~ltG~p~l 360 (921)
+++ .+||||+|++.+.||+..+. . ..+...+|.+|+|||.|++|++|+++|++|||||+|
T Consensus 144 Ss~----~ygv~~dn~~~~~fd~~~~~--------------~--~~~~~~~~~~d~y~~~G~~~~~vi~~yt~ltGr~p~ 203 (635)
T PRK10426 144 SSQ----KYYCHVDNSAYMNFDFSAPE--------------Y--HELELWEDKATLRFECADTYISLLEKLTALFGRQPE 203 (635)
T ss_pred EcC----CEEEEEcCCCcEEEEecCCC--------------c--cEEEEEeCCeeEEEEeCCCHHHHHHHHHHhhCCCCC
Confidence 975 59999999999999996431 1 112234689999999999999999999999999999
Q ss_pred Cccccc-cccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCC------Cc---ceeeCCCCCCChHHHHHHHHH
Q 002442 361 PPLFSI-AYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG------KK---YFTWDRLSFPHPEEMQRKLAT 430 (921)
Q Consensus 361 pP~wal-G~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~------~~---~Ftwd~~~FPdp~~m~~~L~~ 430 (921)
||+||| |+|++.. .++++|++++++|++++||||+||+| ||++. ++ +|+||+++||||++|+++||+
T Consensus 204 ~P~Wal~G~~~g~~--~~~~~v~~v~~~~r~~~IP~d~i~ld-dw~~~~~~~~g~~~~~~~~~d~~~FPdp~~mi~~L~~ 280 (635)
T PRK10426 204 LPDWAYDGVTLGIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQ-DWSGIRMTSFGKRLMWNWKWDSERYPQLDSRIKQLNE 280 (635)
T ss_pred CChhhccCcccccc--CCHHHHHHHHHHHHHcCCCeeEEEEe-cccccccccccccccccceEChhhCCCHHHHHHHHHH
Confidence 999999 9997643 35789999999999999999999999 77532 22 479999999999999999999
Q ss_pred cCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcce
Q 002442 431 KGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLY 510 (921)
Q Consensus 431 ~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~ 510 (921)
+|+|+++|+||+|+. +|++|+||.++|+|||+.+|++|.+.+|||.+++||||||+|++||+++++.. +. ..++++
T Consensus 281 ~G~k~v~~i~P~v~~--~~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~-~~-~~Gvdg 356 (635)
T PRK10426 281 EGIQFLGYINPYLAS--DGDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKN-MI-GLGCSG 356 (635)
T ss_pred CCCEEEEEEcCccCC--CCHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHH-Hh-hcCCCE
Confidence 999999999999997 46899999999999999999999999999999999999999999999987521 22 256899
Q ss_pred EeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccc-eecC
Q 002442 511 IWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VWTG 589 (921)
Q Consensus 511 ~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~-~WtG 589 (921)
||+||||+ +|.|+.|++|..++++||+||++++++++|++++.. ..+|||+||||+|+|+|||++ +|+|
T Consensus 357 ~w~D~~E~---------~p~d~~~~~g~~~~~~hN~Y~~l~~~~~~e~~~~~~-~~~r~f~ltRsg~aGsQry~~~~WsG 426 (635)
T PRK10426 357 WMADFGEY---------LPTDAYLHNGVSAEIMHNAWPALWAKCNYEALEETG-KLGEILFFMRAGYTGSQKYSTLFWAG 426 (635)
T ss_pred EeeeCCCC---------CCCcceeeCCCCHHHhccHHHHHHHHHHHHHHHHhc-CCCCcEEEEccccCCcCCccccccCC
Confidence 99999994 688999999999999999999999999999998874 347999999999999999986 8999
Q ss_pred CCccchh---HHHhhHHHHHHHhccCCCccccCCCCCCC----CCCHhHHHHHhhcccccccccccCCCCCCCCCccccC
Q 002442 590 DNTAEWE---QLRVSVPMILTLGLTGMSFSGADVGGFFG----NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFG 662 (921)
Q Consensus 590 Dn~s~W~---~L~~si~~~L~~~l~G~p~~G~DigGF~g----~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~ 662 (921)
||.++|+ +|+.+|+++|++|+||+||+|+|||||.+ ++++|||+||+|+|||+|+||+|+.. .++|||.|+
T Consensus 427 D~~ssW~~~d~L~~~I~~~Ls~glsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~epw~f~ 504 (635)
T PRK10426 427 DQNVDWSLDDGLASVVPAALSLGMSGHGLHHSDIGGYTTLFGMKRTKELLLRWCEFSAFTPVMRTHEGN--RPGDNWQFD 504 (635)
T ss_pred CCCCcCcChhHHHHHHHHHHHHHhcCcCccccccCCCcCcCCCCCCHHHHHHHHHHhcCCceeecCCCC--CCCCCCCCC
Confidence 9999995 89999999999999999999999999974 58999999999999999999999753 679999996
Q ss_pred h--hHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCcccccccccCCCCccccccCceeeecCceeEeeeeccCceEEEEE
Q 002442 663 E--RNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVY 740 (921)
Q Consensus 663 ~--~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vy 740 (921)
+ ++.+.+++++++||+|+|||||++++|+++|.|||||||++||+|+.++++++|||+|++||||||+++|+++|+||
T Consensus 505 ~~~~~~~~~~~~~~lRy~LlPYlytl~~~a~~tG~Pi~RPL~~~fP~D~~~~~i~~qfm~G~~LLVAPV~~~g~~~r~VY 584 (635)
T PRK10426 505 SDAETIAHFARMTRVFTTLKPYLKELVAEAAKTGLPVMRPLFLHYEDDAATYTLKYQYLLGRDLLVAPVHEEGRTDWTVY 584 (635)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccCCCChHHhcCCcceEecCCeEEeeeccCCceEEEEE
Confidence 4 45677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeEeecceEEeCCeEEEEEeecCccceeccCCeeeeccC
Q 002442 741 LPGKESWYDIRTGARVKGGVTHKLEVSEESVPAFQRPGTIIPRRD 785 (921)
Q Consensus 741 lP~~g~Wyd~~tg~~~~gg~~~~v~~pl~~iPvfvR~GsIiP~~~ 785 (921)
|| +|.|||||||++++|| ++++++||++||||||+|+||+..-
T Consensus 585 LP-~g~W~d~~tg~~~~Gg-~i~v~apl~~iPvFvR~Gsi~~~~~ 627 (635)
T PRK10426 585 LP-EDKWVHLWTGEAFAGG-EITVEAPIGKPPVFYRAGSEWASLF 627 (635)
T ss_pred CC-CCcEEECCCCCEEECC-EEEEeCCCCCcCEEEECCeEhHHHh
Confidence 99 7999999999999999 9999999999999999999998753
No 7
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=100.00 E-value=1.6e-111 Score=980.87 Aligned_cols=440 Identities=43% Similarity=0.882 Sum_probs=399.3
Q ss_pred EEEeCCCHHHHHHHHHHccCCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCC
Q 002442 337 FFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRL 416 (921)
Q Consensus 337 y~f~G~~p~~v~~~Y~~ltG~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~ 416 (921)
|||.|++|++|+++|++|||||+|||+||||+|+|||+|.++++|+++++++++++||+|++|+|++|+.++++|+||++
T Consensus 1 y~~~G~~~~~v~~~y~~ltG~~~~pP~walG~~~~~~~~~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~~~f~~d~~ 80 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELTGRPPLPPRWALGFWQSRWGYYNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGYGDFTWDPE 80 (441)
T ss_dssp EEEEESSHHHHHHHHHHHHSSS----GGGGSEEEEESTBTSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTTBTT-B-TT
T ss_pred CEEeCcCHHHHHHHHHHHHCCCCCCchhhhceEeecCcCCCHHHHHHHHHHHHHcCCCccceeccccccccccccccccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHcCCeEEEEEcCCCCCCCC-hhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhh
Q 002442 417 SFPHPEEMQRKLATKGRHMVTIVDPHIKRDDS-YWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (921)
Q Consensus 417 ~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~-y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~ 495 (921)
+||||++|++.||++|+|+++|++|+|..++. |..|+++.++|++||+++|+++.+.+|||.+++|||+||++++||.+
T Consensus 81 ~FPd~~~~~~~l~~~G~~~~~~~~P~v~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~ 160 (441)
T PF01055_consen 81 RFPDPKQMIDELHDQGIKVVLWVHPFVSNDSPDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWWKE 160 (441)
T ss_dssp TTTTHHHHHHHHHHTT-EEEEEEESEEETTTTB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHHHH
T ss_pred cccchHHHHHhHhhCCcEEEEEeecccCCCCCcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHHHH
Confidence 99999999999999999999999999998876 88999999999999999999999999999999999999999999998
Q ss_pred hcccccccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEecc
Q 002442 496 KFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARA 575 (921)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs 575 (921)
+++. .....+++++|+|||||+.|. .+.++|.++.|.++..++++||+|++++++++++++++.. +++|||++|||
T Consensus 161 ~~~~--~~~~~Gvdg~w~D~~E~~~~~-~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~-~~~r~~~~sRs 236 (441)
T PF01055_consen 161 QLKE--LLDDYGVDGWWLDFGEPSSFD-SNNTLPEDAVHHDGYSGYEMHNLYGLLYAKATYEALREID-PNKRPFIFSRS 236 (441)
T ss_dssp HHHH--HHTTST-SEEEEESTTTBSST-TTBSBCTTEECTTECEHHHHGGGHHHHHHHHHHHHHHHHS-TTSC-EEEESS
T ss_pred HHHH--HHhccCCceEEeecCCccccc-ccccCcccceecCCCCchheeccccccchhhhhhhhhhcc-CCCCcceeecc
Confidence 8763 334458999999999999987 6778899999999999999999999999999999998864 56999999999
Q ss_pred ccCCCCcccceecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCC
Q 002442 576 FFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKR 655 (921)
Q Consensus 576 ~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~ 655 (921)
+++|+|||+++|+||+.++|++|+.+|+++|++|++|+||+|+|||||.+.+++|||+||+|+|+|+|+||+|+..+..+
T Consensus 237 ~~~G~qr~~~~w~GD~~s~w~~L~~~i~~~l~~~~~G~~~~g~DigG~~~~~~~eL~~RW~q~~~f~p~~r~h~~~~~~~ 316 (441)
T PF01055_consen 237 GWAGSQRYGGHWSGDNSSSWDGLRSSIPAMLNMGLSGYPFWGSDIGGFSGDPDEELYIRWYQFGAFSPLFRNHGNKPSNP 316 (441)
T ss_dssp EETTGGGTCEEEECSSBSSHHHHHHHHHHHHHHHCTT-SSEEEEET-SBSTSSHHHHHHHHHHHTTSSSEEEEESTTSSB
T ss_pred cCCCCCccceeecccccccHHHHHHHHHHHHHHhhhhcceecCcccccCCCCCHHHHHHHHHhhcCCcceeecCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777778
Q ss_pred CCccccChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCcccccccccCCCCccccccCceeeecCceeEeeeeccCce
Q 002442 656 REPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAK 735 (921)
Q Consensus 656 ~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~ 735 (921)
+|||.|++++.+++|+++++||+|+||+||++++|+++|.||||||+++||+|+.++++++|||+|++||||||+++|++
T Consensus 317 ~~Pw~~~~~~~~~~r~~~~lRy~L~PY~ys~~~~a~~~G~Pi~Rpl~~~~p~d~~~~~~~~q~m~G~~lLVaPV~~~g~~ 396 (441)
T PF01055_consen 317 REPWSFGDEAEDIFRRAIRLRYRLLPYIYSLAYEAHATGEPIMRPLFWEFPNDPNAYDIDDQFMFGDDLLVAPVLEPGAT 396 (441)
T ss_dssp -SGGGSSCTHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT--SEEEHHHHSTTSGGGGGTTSSEEETTTEEEE---STTSS
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHccCCCCcccccccCCCccHhHhhcCCccccCCCEEEEeeeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCceeeEeecceEEeCCeEEEEEeecCccceeccCCeee
Q 002442 736 HISVYLPGKESWYDIRTGARVKGGVTHKLEVSEESVPAFQRPGTII 781 (921)
Q Consensus 736 ~~~vylP~~g~Wyd~~tg~~~~gg~~~~v~~pl~~iPvfvR~GsIi 781 (921)
+|+|||| +|.|||++||++++||+++++++|++++|||||+|+||
T Consensus 397 ~~~vylP-~G~W~d~~tg~~~~gg~~~~~~~~l~~~P~fvr~Gsii 441 (441)
T PF01055_consen 397 SRTVYLP-EGTWYDFWTGEKYEGGQTITVEAPLDEIPVFVRAGSII 441 (441)
T ss_dssp EEEEEES-SSEEEETTTCCEEESSEEEEEE--TTSCEEEEETTEEE
T ss_pred ccEEECC-CCeEEECCCCCEEECCEEEEEeCCCCccCeEEECCEeC
Confidence 9999999 89999999999999999999999999999999999998
No 8
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=100.00 E-value=1.9e-92 Score=790.18 Aligned_cols=334 Identities=40% Similarity=0.805 Sum_probs=319.7
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCCh--HHHHHHHHHcCC
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHP--EEMQRKLATKGR 433 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp--~~m~~~L~~~G~ 433 (921)
|||+|||+||||||||||+|.++++|++++++|++++||||+||+|++|++++++|+||+++|||| ++|+++||++|+
T Consensus 1 G~p~lpP~walG~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~~mi~~L~~~G~ 80 (339)
T cd06602 1 GRPAMPPYWALGFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRDFTLDPVRFPGLKMPEFVDELHANGQ 80 (339)
T ss_pred CCCCCCchHHhhhHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccCccceecccccCCCccHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred eEEEEEcCCCCCC---CChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcce
Q 002442 434 HMVTIVDPHIKRD---DSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLY 510 (921)
Q Consensus 434 k~v~iidP~i~~~---~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~ 510 (921)
|+++|++|+|+.+ ..|.+|+||+++|+|||+.+|+++.+.+|||.+++||||||+|++||.++++. +....++++
T Consensus 81 k~~~~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~--~~~~~Gvdg 158 (339)
T cd06602 81 HYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKD--FHDQVPFDG 158 (339)
T ss_pred EEEEEEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHH--HHhcCCCcE
Confidence 9999999999986 47899999999999999999999999999999999999999999999998762 233357899
Q ss_pred EeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCC
Q 002442 511 IWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGD 590 (921)
Q Consensus 511 ~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGD 590 (921)
+|+|||||+.| +++||+|++++++++++++++. .++|||++|||+|+|+|||+++|+||
T Consensus 159 ~w~D~~Ep~~~-------------------~~~hN~y~~~~~~~~~~~~~~~--~~~r~~~~sRs~~~G~qry~~~w~GD 217 (339)
T cd06602 159 LWIDMNEPSNF-------------------YDVHNLYGLSEAIATYKALQSI--PGKRPFVISRSTFPGSGRYAGHWLGD 217 (339)
T ss_pred EEecCCCCchH-------------------hhhcchhhHHHHHHHHHHHHhc--CCCCCEEEEecCcccccccceeECCC
Confidence 99999999754 6799999999999999999887 45899999999999999999999999
Q ss_pred CccchhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHH
Q 002442 591 NTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIR 670 (921)
Q Consensus 591 n~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r 670 (921)
+.++|++|+.+|+++|++|++|+||+|+|||||.|++++|||+||+|+|+|+|+||+|+..+...+|||.|++++++++|
T Consensus 218 ~~s~W~~L~~~i~~~l~~~~sG~~~~~~DigGf~g~~~~EL~~RW~Q~~~f~P~~r~H~~~~~~~~ePw~~~~~~~~~~r 297 (339)
T cd06602 218 NASTWEDLRYSIIGMLEFNLFGIPMVGADICGFNGDTTEELCARWMQLGAFYPFSRNHNDIGAIPQEPYVWGPSVADAAR 297 (339)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCCHHHHHHHHHHHhhCceeeccCCCCCCCcCCccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHcCCcccccccccCCCCcccc
Q 002442 671 EAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTF 712 (921)
Q Consensus 671 ~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~ 712 (921)
++++|||+|+|||||++++|+++|.||||||+++||+|+++|
T Consensus 298 ~~~~lRy~L~PYlys~~~~a~~~G~Pi~RPl~~~~p~D~~~~ 339 (339)
T cd06602 298 KALNIRYSLLPYLYTLFYEAHTSGTTVVRPLFFEFPSDPNTY 339 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhccCCCCcccC
Confidence 999999999999999999999999999999999999999875
No 9
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=100.00 E-value=5.4e-92 Score=788.42 Aligned_cols=339 Identities=71% Similarity=1.368 Sum_probs=327.1
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeE
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~ 435 (921)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|++++++|+||+++||||++|+++||++|+|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~k~ 80 (339)
T cd06603 1 GRPPLPPLFSLGYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFPDPEKMQEKLASKGRKL 80 (339)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCceEeCcccCCCHHHHHHHHHHCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecC
Q 002442 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~Dm 515 (921)
++|++|+|+.++++++|++++++|+|||+.+|++|.+.+|||.+++||||||+|++||.++++...+.+..+++++|+||
T Consensus 81 ~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~ 160 (339)
T cd06603 81 VTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDM 160 (339)
T ss_pred EEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEecc
Confidence 99999999988778999999999999999999999999999999999999999999999998754444456789999999
Q ss_pred CCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCccch
Q 002442 516 NEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEW 595 (921)
Q Consensus 516 nEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s~W 595 (921)
|||++|++++.++|.|+.|.+|.+|+++||+|+++++++++++++++.++++|||++|||+|+|+|||+++|+||+.++|
T Consensus 161 ~Ep~~f~~~~~~~p~d~~~~~~~~~~~~hN~y~~~~~~a~~e~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W 240 (339)
T cd06603 161 NEPSVFNGPELTMPKDAIHYGGIEHREVHNIYGLYMHMATFDGLLKRSEGNKRPFVLTRSFFAGSQRYAAIWTGDNTATW 240 (339)
T ss_pred CCccccCCCCCcCCCcceecCCCcHHHHhhHhHHHHHHHHHHHHHHhhccCCceEEEEecccccccceeeeeCCCccCCH
Confidence 99999999999999999999999999999999999999999999988754689999999999999999999999999999
Q ss_pred hHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHH
Q 002442 596 EQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHV 675 (921)
Q Consensus 596 ~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~l 675 (921)
++|+.+|+++|++|++|+||||+|||||.|++++|||+||+|+|||+|+||+|+..++..||||.|++++++++|+++++
T Consensus 241 ~~L~~~i~~~L~~~l~G~~~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~l 320 (339)
T cd06603 241 EHLKISIPMLLSLNICGIPFCGADVGGFFGNPDEELLVRWYQAGAFYPFFRAHAHIDTKRREPWLFGEEYTSIIREAIRL 320 (339)
T ss_pred HHHHHHHHHHHHHhhcCccccCCccCCcCCCCCHHHHHHHHHHhhcCceeecCCCCCCCCCCCeecChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHcC
Q 002442 676 RYMFLPYFYTLFREANTTG 694 (921)
Q Consensus 676 Ry~LlPY~Yt~~~~a~~~G 694 (921)
||+|||||||++++||++|
T Consensus 321 Ry~LlPYlys~~~~a~~tG 339 (339)
T cd06603 321 RYALLPYWYTLFYEASVTG 339 (339)
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999998
No 10
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=100.00 E-value=9.3e-90 Score=762.81 Aligned_cols=317 Identities=42% Similarity=0.870 Sum_probs=304.5
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeE
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~ 435 (921)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|++++++|+||+++||||++|+++||++|+|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~i~~l~~~g~k~ 80 (317)
T cd06600 1 GKPALPPMWALGYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRLFTWDPYRFPEPKKLIDELHKRNVKL 80 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCceeechhcCCCHHHHHHHHHHCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecC
Q 002442 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~Dm 515 (921)
++|++|+|+.++.|+.|.++.++|+|||+.+|+++.|.+|||.+++||||||+|++||.++++. +....+++++|+||
T Consensus 81 ~~~~~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~--~~~~~gvdg~w~D~ 158 (317)
T cd06600 81 VTIVDPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSE--WLNSQGVDGIWLDM 158 (317)
T ss_pred EEEeeccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHH--HhhcCCCceEEeeC
Confidence 9999999998877899999999999999999999999999999999999999999999998863 23246799999999
Q ss_pred CCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCccch
Q 002442 516 NEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEW 595 (921)
Q Consensus 516 nEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s~W 595 (921)
|||+.| +++||+||+++++++++++++.. +++|||++|||+|+|+|||+++|+||+.++|
T Consensus 159 ~Ep~~~-------------------~~~hn~y~~~~~~a~~~~~~~~~-~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W 218 (317)
T cd06600 159 NEPSDF-------------------EKVHNLYGLYEAMATAEGFRTSH-PRNRIFILTRSGFAGSQKYAAIWTGDNTASW 218 (317)
T ss_pred CCCccH-------------------HHhcchhhHHHHHHHHHHHHHhc-CCCCceEEEeccccccCCccceECCcccccH
Confidence 999764 68999999999999999999876 4599999999999999999999999999999
Q ss_pred hHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHH
Q 002442 596 EQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHV 675 (921)
Q Consensus 596 ~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~l 675 (921)
++|+.+|+++|++|++|+||+|+|||||.|++++|||+||+|+|||+|+||+|+..+...||||.|++++.+++|+++++
T Consensus 219 ~~L~~~i~~~l~~gl~G~p~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~l 298 (317)
T cd06600 219 DDLKLSIPLVLGLSISGIPFVGCDIGGFQGDNSMELLVRWYQLGAFFPFYRSHKATDGKDTEPVFFPDYYKEKVREIVEL 298 (317)
T ss_pred HHHHHHHHHHHHHHhcCCCccCcccCCCCCCCCHHHHHHHHHHhhcCceeeccCCCCCCCCCCeecCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHcC
Q 002442 676 RYMFLPYFYTLFREANTTG 694 (921)
Q Consensus 676 Ry~LlPY~Yt~~~~a~~~G 694 (921)
||+|+|||||++++||++|
T Consensus 299 Ry~LlPYlytl~~~a~~~G 317 (317)
T cd06600 299 RYKLLPYLYTLFLRAHEKG 317 (317)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998
No 11
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=100.00 E-value=2.1e-89 Score=767.84 Aligned_cols=335 Identities=50% Similarity=0.987 Sum_probs=320.0
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeE
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~ 435 (921)
|||+|||+||||||||||+|.++++|+++++++++++||||+||+|++|++++++|+||+++||||++|+++||++|+|+
T Consensus 1 G~p~l~P~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~fPdp~~m~~~l~~~g~~~ 80 (339)
T cd06604 1 GRPPLPPKWALGYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRVFTWDKERFPDPKELIKELHEQGFKV 80 (339)
T ss_pred CCCCCCchHHHhHHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCceeeccccCCCHHHHHHHHHHCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecC
Q 002442 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~Dm 515 (921)
++|++|+|+.+++|++|+|++++|+|||+++|+++.+.||||.+++||||||+|++||.++++. +. ..+++++|+||
T Consensus 81 ~~~~~P~v~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~--~~-~~Gvdg~w~D~ 157 (339)
T cd06604 81 VTIIDPGVKVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKK--FV-DLGVDGIWNDM 157 (339)
T ss_pred EEEEeCceeCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHH--Hh-hCCCceEeecC
Confidence 9999999998878899999999999999999999999999999999999999999999998763 22 46789999999
Q ss_pred CCCCccCCCcc-ccCCCcccCCc---ccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCC
Q 002442 516 NEPSVFNGPEV-TMPRDALHLDR---VEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDN 591 (921)
Q Consensus 516 nEps~f~g~e~-t~~~d~~h~~g---~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn 591 (921)
|||++|..++. ++|.|+.|.++ .+|+++||+|++++++|+++++++..+ ++|||++|||+|+|+|||+++|+||+
T Consensus 158 ~Ep~~~~~~~~~~~p~~~~~~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~-~~r~~~~sRs~~~G~qry~~~W~GD~ 236 (339)
T cd06604 158 NEPAVFNTPGKTTMPRDAVHRLDGGGGTHEEVHNVYGLLMARATYEGLKKARP-NERPFILTRAGYAGIQRYAAVWTGDN 236 (339)
T ss_pred CCccccCCcccccCCccceeeCCCCCCcHhHhcchhhHHHHHHHHHHHHHhCC-CCCcEEEEecccccccccccccCCcc
Confidence 99999987654 58999998754 489999999999999999999998863 58999999999999999999999999
Q ss_pred ccchhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHH
Q 002442 592 TAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIRE 671 (921)
Q Consensus 592 ~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~ 671 (921)
.++|++|+.+|+++|++|++|+||+|+|||||.+++++|||+||+|+|||+|+||+|+..+..+||||.|++++.+++|+
T Consensus 237 ~ssW~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~EL~~RW~Q~g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~ 316 (339)
T cd06604 237 RSSWEHLRLSIPMLLNLGLSGVPFVGADIGGFGGDPSPELLVRWMQLGAFFPFFRNHSAKGTRDQEPWAFGEEVEEIARE 316 (339)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHHhccchhhccCCCCCCCCCCeecChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHcC
Q 002442 672 AIHVRYMFLPYFYTLFREANTTG 694 (921)
Q Consensus 672 ~i~lRy~LlPY~Yt~~~~a~~~G 694 (921)
++++||+|||||||++++||++|
T Consensus 317 ~~~lRy~LlPY~ysl~~~a~~tG 339 (339)
T cd06604 317 AIKLRYRLLPYLYTLFWEASETG 339 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999998
No 12
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=2.4e-82 Score=703.46 Aligned_cols=292 Identities=33% Similarity=0.696 Sum_probs=265.5
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeE
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~ 435 (921)
|+|+|||+||||||||||+|.++++|++|+++||+++||||+||+|||||+++++||||+++||||++|+++||++|+|+
T Consensus 1 G~p~mpP~WalG~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~Ft~d~~~FPdp~~mv~~L~~~G~kl 80 (332)
T cd06601 1 GRSKLKPRYALGFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRTFTTNGGGFPNPKEMFDNLHNKGLKC 80 (332)
T ss_pred CCCCCCchHHhhhhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCceeecCCCCCCHHHHHHHHHHCCCeE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecC
Q 002442 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~Dm 515 (921)
|+|++|+|+ .|.+|||.+++|||+||+|++||.++++... ..+++++|+||
T Consensus 81 v~~i~P~i~--------------------------~g~~~~~~~~~pDftnp~ar~wW~~~~~~l~---~~Gv~~~W~Dm 131 (332)
T cd06601 81 STNITPVIS--------------------------YGGGLGSPGLYPDLGRPDVREWWGNQYKYLF---DIGLEFVWQDM 131 (332)
T ss_pred EEEecCcee--------------------------cCccCCCCceeeCCCCHHHHHHHHHHHHHHH---hCCCceeecCC
Confidence 999999997 1346888899999999999999998875322 24688999999
Q ss_pred CCCCccCC--CccccCCCcccCC--------cccchhhchhhhhHHHHHhHHHHHhhcC-CCCCCeEEeccccCCCCccc
Q 002442 516 NEPSVFNG--PEVTMPRDALHLD--------RVEHRELHNAYGYYFHMATSDGLLKREN-GKDRPFVLARAFFAGSQRYG 584 (921)
Q Consensus 516 nEps~f~g--~e~t~~~d~~h~~--------g~~~~~~HN~Yg~~~~~at~~~l~~~~~-~~~RpfilsRs~f~Gsqry~ 584 (921)
|||++|++ ...++|.++.+.. +..|+++||+||+++++|+++++++... .++||||||||+|+|+|||+
T Consensus 132 nEp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~Y~~~~~~a~~e~~~~~~~~~~~RpfiltRS~~aGsqrY~ 211 (332)
T cd06601 132 TTPAIMPSYGDMKGFPPRLLVTDDSYENNVKRKPAIELWNLYSYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGMQRFA 211 (332)
T ss_pred CCcccccCCCccCCCCCcccccCCccccccCCchHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCcEEEEecCcCccCCcC
Confidence 99999974 3457887776543 3468999999999999999999977531 35899999999999999999
Q ss_pred ceecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCC----------CCHhHHHHHhhcccccccccccCCCC--
Q 002442 585 AVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN----------PDTELLVRWYQLGAYYPFFRAHAHHD-- 652 (921)
Q Consensus 585 ~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~----------~~~EL~~RW~Q~gaf~P~~R~H~~~~-- 652 (921)
++|+|||.|+|++|+.+|+++|++||+|+||||+|||||.|+ +++|||+||+|+|||+||||+|+...
T Consensus 212 ~~WsGDn~stW~~L~~si~~~L~~~lsGip~~g~DIGGF~g~~~~~~~~~~~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~ 291 (332)
T cd06601 212 GLWTGDNSSSWDFLQINIAQVLNLGMSGLPIAGSDIGGFTSYDGENSIQRTWCNPELLIRWYQAGFLLPWFRNHYDRKIR 291 (332)
T ss_pred ceeCCCcccCHHHHHHHHHHHHHhhhcCCCccCCccCCcCCCCcccccccCCCCHHHHHHHHHHhcCCceeccCCCCccC
Confidence 999999999999999999999999999999999999999987 58999999999999999999998754
Q ss_pred CCCCCc-----------------cccChhHHHHHHHHHHHHH
Q 002442 653 TKRREP-----------------WLFGERNTQLIREAIHVRY 677 (921)
Q Consensus 653 ~~~~eP-----------------w~~~~~~~~~~r~~i~lRy 677 (921)
+++||| |.+ +++++++|++|++||
T Consensus 292 ~~~~ep~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~i~~Ry 332 (332)
T cd06601 292 QKFQEPAKYFQEPYAHLIDYEQLYLY-ENVPEICRKYVELRY 332 (332)
T ss_pred cccCCccccccccccccccccccccc-HHHHHHHHHHHHhcC
Confidence 678888 555 889999999999998
No 13
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.9e-79 Score=680.71 Aligned_cols=307 Identities=31% Similarity=0.601 Sum_probs=284.1
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccC------CCcceeeCCCCCCChHHHHHHHH
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTD------GKKYFTWDRLSFPHPEEMQRKLA 429 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~------~~~~Ftwd~~~FPdp~~m~~~L~ 429 (921)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|+. ..++||||+++||||++|+++||
T Consensus 1 G~~~l~P~wa~G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~ 80 (317)
T cd06598 1 GRQPLPPRWALGNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLA 80 (317)
T ss_pred CCCCCCchHHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999986 34589999999999999999999
Q ss_pred HcCCeEEEEEcCCCCCCCChhhhHHHHHcCce-eecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCc
Q 002442 430 TKGRHMVTIVDPHIKRDDSYWLHNEATEKGYY-VKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPS 508 (921)
Q Consensus 430 ~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~-vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~ 508 (921)
++|+|+++|++|+|+.++ +.|+|+.++|++ ++..+|+++.+.+|||.+++||||||+|++||.++++.. -..++
T Consensus 81 ~~G~k~~~~v~P~v~~~~--~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~---~~~Gv 155 (317)
T cd06598 81 KKGVKTIVITEPFVLKNS--KNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKL---IDQGV 155 (317)
T ss_pred HcCCcEEEEEcCcccCCc--hhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHh---hhCCc
Confidence 999999999999999765 689999999995 555667889999999999999999999999999988643 23578
Q ss_pred ceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccc-ee
Q 002442 509 LYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VW 587 (921)
Q Consensus 509 ~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~-~W 587 (921)
+++|+|||||+.| |.+..|.+| .+.++||+|+++++++++++++++. .++|||+++||+|+|+|||++ +|
T Consensus 156 dg~w~D~~Ep~~~-------~~~~~~~~g-~~~~~hN~y~~~~~~~~~e~~~~~~-~~~r~~~~~Rs~~~Gsqry~~~~W 226 (317)
T cd06598 156 TGWWGDLGEPEVH-------PPDMCHHKG-KAAEVHNIYGHLWAKSIYEGYQQNY-PNERPFILMRAGFAGSQRYGVIPW 226 (317)
T ss_pred cEEEecCCCcccc-------CCccccCCC-cHhHHhhHHHHHHHHHHHHHHHHhc-CCCCeEEEEecCcCccccCcCCcc
Confidence 9999999999875 456667665 6899999999999999999998875 458999999999999999985 89
Q ss_pred cCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCC--CCHhHHHHHhhcccccccccccCCCCCCCCCccccChhH
Q 002442 588 TGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN--PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERN 665 (921)
Q Consensus 588 tGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~--~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~ 665 (921)
+||+.++|++|+.+|+++|++|++|+||+|+|||||.++ +++|||+||+|+|||+|+||+|++.+ .++|||.|++++
T Consensus 227 sGD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~~~EL~~RW~q~g~f~P~~R~H~~~~-~~~ePw~~~~~~ 305 (317)
T cd06598 227 SGDVGRTWDGLKSQPNAALQMSMSGIDYYHSDIGGFAGGDELDPELYTRWFQYGAFDPPFRPHAQNA-IPPEPVFYSIGT 305 (317)
T ss_pred CCCCcCCHHHHHHHHHHHHhhhccCCcccCCCcCCcCCCCCCCHHHHHHHHHhccCCcccccCCCCC-CCCCCCcCChHH
Confidence 999999999999999999999999999999999999998 99999999999999999999999875 468999999999
Q ss_pred HHHHHHHHHHHH
Q 002442 666 TQLIREAIHVRY 677 (921)
Q Consensus 666 ~~~~r~~i~lRy 677 (921)
++++|++|++||
T Consensus 306 ~~~~r~~~~lRY 317 (317)
T cd06598 306 KNINRENIRLRY 317 (317)
T ss_pred HHHHHHHHHhhC
Confidence 999999999998
No 14
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=4.4e-79 Score=676.70 Aligned_cols=306 Identities=31% Similarity=0.555 Sum_probs=290.4
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCc--ceeeCCCCCCChHHHHHHHHHcCC
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKK--YFTWDRLSFPHPEEMQRKLATKGR 433 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~--~Ftwd~~~FPdp~~m~~~L~~~G~ 433 (921)
|+|+|||+||||||||||+|.++++|+++++++++++||||+||+|++|+++++ +|+||+++||||++|+++||++|+
T Consensus 1 G~~~l~P~wa~G~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~~~~i~~l~~~G~ 80 (308)
T cd06593 1 GRPALPPAWSFGLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDPEGMLSRLKEKGF 80 (308)
T ss_pred CCCCCCchHHHHHHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999998877 999999999999999999999999
Q ss_pred eEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEee
Q 002442 434 HMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWN 513 (921)
Q Consensus 434 k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~ 513 (921)
|+++|++|+|..++ ++|++++++|+|||+.+|+++.+.+|||.+++||||||+|++||.++++. +.. .+++++|+
T Consensus 81 ~~~~~~~P~i~~~~--~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~--~~~-~Gid~~~~ 155 (308)
T cd06593 81 KVCLWINPYIAQKS--PLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKP--LLD-MGVDCFKT 155 (308)
T ss_pred eEEEEecCCCCCCc--hhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHH--HHH-hCCcEEec
Confidence 99999999998765 68999999999999999999999999999999999999999999999863 222 46899999
Q ss_pred cCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCcc
Q 002442 514 DMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTA 593 (921)
Q Consensus 514 DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s 593 (921)
||||+ +|.|+.+++|..++++||+|+++++++++|++++.. +++|||++|||+|+|+|||+++|+||+.+
T Consensus 156 D~~e~---------~p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~~~~-~~~r~~~~~Rs~~~Gsqry~~~w~GD~~s 225 (308)
T cd06593 156 DFGER---------IPTDVVYYDGSDGEKMHNYYALLYNKAVYEATKEVK-GEGEAVVWARSAWAGSQKYPVHWGGDCES 225 (308)
T ss_pred CCCCC---------CCccccccCCCCcceeeeHHHHHHHHHHHHHHHHhc-CCCCeEEEEcCCccccccCCCEECCCccc
Confidence 99996 577888888889999999999999999999998886 55799999999999999999999999999
Q ss_pred chhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHH
Q 002442 594 EWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAI 673 (921)
Q Consensus 594 ~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i 673 (921)
+|++|+.+|+++|++|++|+||+|+|||||.+++++|||+||+|+|||+|+||+|+.. .||||.|++++++++|+++
T Consensus 226 ~w~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~EL~~RW~q~gaf~P~~r~h~~~---~~~Pw~~~~~~~~~~r~~~ 302 (308)
T cd06593 226 TFEGMAESLRGGLSLGLSGFGFWSHDIGGFEGTPPPDLYKRWAQFGLLSSHSRLHGSG---YREPWEYGEEAVDVVRKFA 302 (308)
T ss_pred CHHHHHHHHHHHHhccccCCceecCccCCcCCCCCHHHHHHHHHhCcCCcccccCCCC---CCCCcccChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999864 7999999999999999999
Q ss_pred HHHHhh
Q 002442 674 HVRYMF 679 (921)
Q Consensus 674 ~lRy~L 679 (921)
++||+|
T Consensus 303 ~lRy~L 308 (308)
T cd06593 303 KLKYRL 308 (308)
T ss_pred HHHhcC
Confidence 999997
No 15
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=1.2e-77 Score=666.83 Aligned_cols=305 Identities=28% Similarity=0.472 Sum_probs=275.7
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCc--ceeeCCCCCCChHHHHHHHHHcCC
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKK--YFTWDRLSFPHPEEMQRKLATKGR 433 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~--~Ftwd~~~FPdp~~m~~~L~~~G~ 433 (921)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|+.+.+ +||||+++||||++|+++||++|+
T Consensus 1 G~~~m~P~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~ 80 (319)
T cd06591 1 GKAPMMPKWAYGFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNA 80 (319)
T ss_pred CCCCCCchHHHHHHHhcccCCCHHHHHHHHHHHHHhCCCccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999888 999999999999999999999999
Q ss_pred eEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEee
Q 002442 434 HMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWN 513 (921)
Q Consensus 434 k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~ 513 (921)
|+++|++|+|+.+ +..|++++++|+|||+.+|+.+. .||||.+++||||||+|++||.++++. ..-..+++++|+
T Consensus 81 kv~~~i~P~v~~~--~~~y~e~~~~g~~v~~~~g~~~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~--~~~~~Gvdg~w~ 155 (319)
T cd06591 81 ELMISIWPTFGPE--TENYKEMDEKGYLIKTDRGPRVT-MQFGGNTRFYDATNPEAREYYWKQLKK--NYYDKGVDAWWL 155 (319)
T ss_pred EEEEEecCCcCCC--ChhHHHHHHCCEEEEcCCCCeee-eeCCCCccccCCCCHHHHHHHHHHHHH--HhhcCCCcEEEe
Confidence 9999999999865 47899999999999999999876 899999999999999999999887652 122367899999
Q ss_pred cCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccc-eecCCCc
Q 002442 514 DMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VWTGDNT 592 (921)
Q Consensus 514 DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~-~WtGDn~ 592 (921)
|||||+.|...+. ..+..+. ..+++++||+|+++++++++++++++. +++|||+++||+|+|+|||++ +|+||+.
T Consensus 156 D~~Ep~~~~~~~~--~~~~~~~-~~~~~~~hN~y~~~~~~~~~e~~~~~~-~~~r~f~~sRs~~~Gsqry~~~~W~GD~~ 231 (319)
T cd06591 156 DAAEPEYSVYDFG--LDNYRYH-LGPGLEVGNAYPLMHAKGIYEGQRAAG-DEKRVVILTRSAWAGSQRYGALVWSGDID 231 (319)
T ss_pred cCCCCCccCCccc--ccCcccC-CCCchhhhhhhHHHHHHHHHHHHHHhC-CCCCceEEEeccccccccccCceeCCCcc
Confidence 9999998864321 1222222 237899999999999999999998875 359999999999999999985 8999999
Q ss_pred cchhHHHhhHHHHHHHhccCCCccccCCCCCCCCCC---------HhHHHHHhhcccccccccccCCCCCC-CCCccccC
Q 002442 593 AEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPD---------TELLVRWYQLGAYYPFFRAHAHHDTK-RREPWLFG 662 (921)
Q Consensus 593 s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~---------~EL~~RW~Q~gaf~P~~R~H~~~~~~-~~ePw~~~ 662 (921)
|+|++|+.+|+++|++|++|+||+|+|||||.|+++ +|||+||+|+|||+|+||+|+..+.. .+|||.|+
T Consensus 232 s~w~~L~~~i~~~l~~glsG~~~~g~DiGGF~~~~~~~~~~~~~~~EL~~RW~q~gaf~P~~R~H~~~~~~~~~ePw~~g 311 (319)
T cd06591 232 SSWETLRRQIAAGLNMGLSGIPWWTTDIGGFFVGNPPAGLDDPEYRELYVRWFQFGAFCPVMRSHGTREPREINEFWSYG 311 (319)
T ss_pred ccHHHHHHHHHHHHHHhhcCCccccCCcCCcCCCCccccccCCccHHHHHHHHHHhcCccccccCCCCCCCCCCcCcCCC
Confidence 999999999999999999999999999999998876 89999999999999999999987653 58999999
Q ss_pred hhHHHHH
Q 002442 663 ERNTQLI 669 (921)
Q Consensus 663 ~~~~~~~ 669 (921)
+++++++
T Consensus 312 ~e~~~~~ 318 (319)
T cd06591 312 EEVYDIL 318 (319)
T ss_pred hHHHHhh
Confidence 9988875
No 16
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=6e-76 Score=652.72 Aligned_cols=302 Identities=32% Similarity=0.585 Sum_probs=269.9
Q ss_pred CCCCCCccccccccccccCCCC-----HHHHHHHHHhcccCCCCceEEEeeccccCC----CcceeeCCCCCCChHHHHH
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRD-----EEDVEQVDSKFDEHDIPYDVLWLDIEHTDG----KKYFTWDRLSFPHPEEMQR 426 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~-----~~~v~~v~~~~~~~~IP~D~iwlDid~~~~----~~~Ftwd~~~FPdp~~m~~ 426 (921)
|+|+|||+||||||||||+|.+ |++|++++++|++++||||+||||++|+++ +++|+||+++||||++|++
T Consensus 1 G~~~mpP~walG~~~sr~~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~~~f~~d~~~FPdp~~mi~ 80 (317)
T cd06599 1 GKPAMVPRWSLGYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYVFNWNKDRFPDPAAFVA 80 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCceeeeecCcccCCCHHHHHH
Confidence 8999999999999999999988 999999999999999999999999999965 4579999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCC-CeeeeeeCCccccccCCChhHHHHHhhhcccccccCC
Q 002442 427 KLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKR-DYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGS 505 (921)
Q Consensus 427 ~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~-~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~ 505 (921)
+||++|+|+++|++|+|..++ +.|+|+.++|+|||+.+|+ ++.+.+|||.+++||||||+|++||.++++.... .
T Consensus 81 ~L~~~g~k~~~~i~P~i~~~~--~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~--~ 156 (317)
T cd06599 81 KFHERGIRLAPNIKPGLLQDH--PRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALL--D 156 (317)
T ss_pred HHHHCCCEEEEEeCCcccCCC--HHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHh--c
Confidence 999999999999999998764 7899999999999999887 5889999999999999999999999998742211 2
Q ss_pred cCcceEeecCCCCCccCCCccccCCCcccC-C--cccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCc
Q 002442 506 TPSLYIWNDMNEPSVFNGPEVTMPRDALHL-D--RVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQR 582 (921)
Q Consensus 506 ~~~~~~W~DmnEps~f~g~e~t~~~d~~h~-~--g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqr 582 (921)
.+++++|+|||||+.+ +.++.+. + +..+.++||+|++++++|+++++++.. +++|||+|+||+|+|+||
T Consensus 157 ~Gvdg~w~D~~E~~~~-------~~~~~~~~~g~~~~~~~~~n~y~~l~~~a~~~~~~~~~-~~~r~f~ltRs~~~G~qr 228 (317)
T cd06599 157 LGIDSTWNDNNEYEIW-------DDDAVCDGFGKPGTIGELRPVQPNLMARASHEAQAEHY-PNRRPYIVSRSGFAGIQR 228 (317)
T ss_pred CCCcEEEecCCCCccC-------CCcceecCCCCccchhhcccchHHHHHHHHHHHHHHhC-CCCCcEEEEcCCcccccC
Confidence 5789999999999854 2344332 2 234567999999999999999998775 458999999999999999
Q ss_pred ccceecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCC-CCHhHHHHHhhcccccccccccCCCC-CCCCCccc
Q 002442 583 YGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN-PDTELLVRWYQLGAYYPFFRAHAHHD-TKRREPWL 660 (921)
Q Consensus 583 y~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~-~~~EL~~RW~Q~gaf~P~~R~H~~~~-~~~~ePw~ 660 (921)
|+++|+||+.++|++|+.+|+++|++|++|+||+|+|||||.++ +++|||+||+|+|||+|+||+|+..+ ..+||||.
T Consensus 229 y~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIGGF~~~~~~~ELy~RW~Q~g~F~P~~R~H~~~~~~~~~ePw~ 308 (317)
T cd06599 229 YAQTWSGDNRTSWKTLRYNIAMGLGMGLSGVANIGHDIGGFAGPAPEPELFVRWVQNGIFQPRFCIHSWNTDNTVTEPWM 308 (317)
T ss_pred CcCeeCCCcccCHHHHHHHHHHHHhhhccCCcccccccCccCCCCCCHHHHHHHHHHccCCHhhhcccCCCCCCCcCCee
Confidence 99999999999999999999999999999999999999999986 89999999999999999999998764 46799999
Q ss_pred cChhHHHHHH
Q 002442 661 FGERNTQLIR 670 (921)
Q Consensus 661 ~~~~~~~~~r 670 (921)
|++ .++++|
T Consensus 309 f~~-~~~~~~ 317 (317)
T cd06599 309 YPE-VTDYIR 317 (317)
T ss_pred ccc-chhhcC
Confidence 975 455543
No 17
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.1e-75 Score=655.09 Aligned_cols=298 Identities=27% Similarity=0.425 Sum_probs=266.5
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEee-------------cccc--CCCcceeeC------
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLD-------------IEHT--DGKKYFTWD------ 414 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlD-------------id~~--~~~~~Ftwd------ 414 (921)
|||+|||+||||||||||+|.++++|++++++|++++||||+|||| |+|| ++++.|+|+
T Consensus 1 G~p~lpP~walG~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~ 80 (340)
T cd06597 1 GKPELLPKWAFGLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPV 80 (340)
T ss_pred CCCCCCchHHhhhhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccCc
Confidence 8999999999999999999999999999999999999999999886 7776 455555554
Q ss_pred CCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCC-----ChhhhHHHHHcCceeecCCCCCeee-eeeCCccccccCCChh
Q 002442 415 RLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDD-----SYWLHNEATEKGYYVKDATKRDYDG-WCWPGSSSYLDMLNPE 488 (921)
Q Consensus 415 ~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~-----~y~~~~~~~~~~~~vk~~~g~~~~g-~~WpG~~~~~Dftnp~ 488 (921)
+++||||++|+++||++|+|+++|++|+|+.+. .+..|.+++++|+|||+.+|+++.+ .+|||.+++||||||+
T Consensus 81 ~~~FPdp~~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftnp~ 160 (340)
T cd06597 81 EGRWPNPKGMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNPE 160 (340)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCCHH
Confidence 368999999999999999999999999998642 1235789999999999999998764 6899999999999999
Q ss_pred HHHHHhhhcccccccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCC
Q 002442 489 IRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDR 568 (921)
Q Consensus 489 a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~R 568 (921)
|++||.++++. +....+++++|+|||||. .+.++.|++|.+++++||+||+++++++++++++. ++|
T Consensus 161 a~~Ww~~~~~~--~~~~~Gidg~w~D~~E~~--------~~~~~~~~~g~~~~~~hN~y~~~~~~~~~e~~~~~---~~r 227 (340)
T cd06597 161 AAQWWMEKRRY--LVDELGIDGFKTDGGEHV--------WGRDLHFRDGRRGDEMRNTYPNHYVRAYNDFLRRA---KKD 227 (340)
T ss_pred HHHHHHHHHHH--HHHhcCCcEEEecCCCcc--------CCCCceecCCCcHHHhhcccHHHHHHHHHHHHHhc---cCC
Confidence 99999998763 222357899999999974 24466778888999999999999999999987665 389
Q ss_pred CeEEeccccCCCCcccceecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCC-CCHhHHHHHhhcccccccccc
Q 002442 569 PFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN-PDTELLVRWYQLGAYYPFFRA 647 (921)
Q Consensus 569 pfilsRs~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~-~~~EL~~RW~Q~gaf~P~~R~ 647 (921)
|||||||+|+|+|||+++|+|||.|+|++|+.+|+++|++||+|+||+|+|||||.|+ |++|||+||+|+|||+|+||+
T Consensus 228 ~filtRs~~~Gsqry~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIgGF~g~~~~~EL~~RW~Q~g~F~P~~R~ 307 (340)
T cd06597 228 GVTFSRAGYTGAQAHGIFWAGDENSTFGAFRWSVFAGLSASASGIPYWGWDLAGFTGDVPTAELYVRSTAMAAFVPIMQY 307 (340)
T ss_pred cEEEEecccCccCCCcceecCCCCCCHHHHHHHHHHHHHHhhcCCCcCCCccCCcCCCCCCHHHHHHHHHHhhcchhhhh
Confidence 9999999999999999999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred cCCCCC-----CCCCccccChhHH
Q 002442 648 HAHHDT-----KRREPWLFGERNT 666 (921)
Q Consensus 648 H~~~~~-----~~~ePw~~~~~~~ 666 (921)
|+..+. .+||||.|++++.
T Consensus 308 H~~~~~~~~~~~~~epw~~~~~~~ 331 (340)
T cd06597 308 HSEFNGHSSPNEDRTPWNIAERTG 331 (340)
T ss_pred ccCCCCCCcCcCCccCCcccCcCC
Confidence 998764 5899999988653
No 18
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=100.00 E-value=2.1e-75 Score=647.16 Aligned_cols=298 Identities=23% Similarity=0.405 Sum_probs=272.7
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccC------CC---cceeeCCCCCCChHHHHH
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTD------GK---KYFTWDRLSFPHPEEMQR 426 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~------~~---~~Ftwd~~~FPdp~~m~~ 426 (921)
|+++|||+||||+||||+.+ ++++|+++++++++++||||+|||| +||+ ++ ++||||+++||||++|++
T Consensus 1 G~~p~~P~wa~G~~~~~~~~-s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g~~~~~~f~~d~~~FPdp~~mi~ 78 (317)
T cd06594 1 GRQPELPDWAYGGAILGLQG-GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFGDRLWWNWEWDPERYPGLDELIE 78 (317)
T ss_pred CCCCCCchhhhCcEEeeeeC-CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccccceeeeeeEEChhhCCCHHHHHH
Confidence 89999999999999999865 9999999999999999999999999 7765 22 368999999999999999
Q ss_pred HHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCc
Q 002442 427 KLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGST 506 (921)
Q Consensus 427 ~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~ 506 (921)
+||++|+|+|+|++|+|+.+... .|+++.++|+|||+++|+++.+.+|||.+++||||||+|++||.++++.. .-..
T Consensus 79 ~Lh~~G~~~~~~i~P~v~~~~~~-~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~--~~~~ 155 (317)
T cd06594 79 ELKARGIRVLTYINPYLADDGPL-YYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEM--LLDL 155 (317)
T ss_pred HHHHCCCEEEEEecCceecCCch-hHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHH--hhhc
Confidence 99999999999999999986532 37999999999999999999999999999999999999999999998632 1235
Q ss_pred CcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccc-
Q 002442 507 PSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA- 585 (921)
Q Consensus 507 ~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~- 585 (921)
+++++|+||||+ +|.|+.+++|.+++++||+|++++++++++++++.. +++||||||||+|+|+|||++
T Consensus 156 Gvdg~w~D~~E~---------~p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~~~~~~-~~~r~fvltRs~~~Gsqry~~~ 225 (317)
T cd06594 156 GLSGWMADFGEY---------LPFDAVLHSGEDAATMHNRYPELWAKLNREAVEEAG-KTGDILFFMRSGFTGSQKYSTL 225 (317)
T ss_pred CCcEEEecCCCC---------CCCcceecCCCCHHHHhhHHHHHHHHHHHHHHHHhc-cCCCeEEEEccccccccccccc
Confidence 789999999995 467778888889999999999999999999998875 458999999999999999985
Q ss_pred eecCCCccchh---HHHhhHHHHHHHhccCCCccccCCCCCCC----CCCHhHHHHHhhcccccccccccCCCCCCCCCc
Q 002442 586 VWTGDNTAEWE---QLRVSVPMILTLGLTGMSFSGADVGGFFG----NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREP 658 (921)
Q Consensus 586 ~WtGDn~s~W~---~L~~si~~~L~~~l~G~p~~G~DigGF~g----~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~eP 658 (921)
+|+|||.++|+ +|+.+|+++|++||+|+||+|+|||||.+ +|++|||+||+|+|||+|+||+|+...++.++|
T Consensus 226 ~WsGD~~s~W~~~~~L~~~i~~~L~~~lsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~ 305 (317)
T cd06594 226 FWAGDQMVSWDAHDGLKSVVPGALSSGLSGYALHHSDIGGYTSLNGYVRTEELLLRWAEMAAFTPVMRTHEGNRPDDNWQ 305 (317)
T ss_pred ccCCCCCCCCcCcccHHHHHHHHhhccccCCCcccCccCCCcCCCCCCCCHHHHHHHHHHhccccceecCCCCCCCCCcc
Confidence 89999999998 79999999999999999999999999975 589999999999999999999999999999999
Q ss_pred cccChhHHHH
Q 002442 659 WLFGERNTQL 668 (921)
Q Consensus 659 w~~~~~~~~~ 668 (921)
|.+++++.++
T Consensus 306 ~~~~~~~~~~ 315 (317)
T cd06594 306 FYSDDETLRH 315 (317)
T ss_pred cccChHHHHh
Confidence 9999877654
No 19
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.8e-71 Score=610.17 Aligned_cols=280 Identities=23% Similarity=0.400 Sum_probs=235.2
Q ss_pred cCCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccC---------CCcceeeCCCCCCChHHHH
Q 002442 355 TGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTD---------GKKYFTWDRLSFPHPEEMQ 425 (921)
Q Consensus 355 tG~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~---------~~~~Ftwd~~~FPdp~~m~ 425 (921)
||+|+|||+||||||||||.|.++++|++|+++||+++||||+||+|+||+. ++++||||+++||||++|+
T Consensus 1 TG~~~~~P~walG~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi 80 (292)
T cd06595 1 AGKIPLLPRYAFGNWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLL 80 (292)
T ss_pred CCCCCCCchHHHHhHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHH
Confidence 8999999999999999999999999999999999999999999999999964 5678999999999999999
Q ss_pred HHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCC
Q 002442 426 RKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGS 505 (921)
Q Consensus 426 ~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~ 505 (921)
++||++|+|+|+|++|+|+.+..+..|++..+ +..++... +....+|||||++++||.+.+... .-.
T Consensus 81 ~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~~~-~~~~~~~~----------~~~~~~D~tnp~a~~~w~~~~~~~--~~~ 147 (292)
T cd06595 81 QDLHDRGLKVTLNLHPADGIRAHEDQYPEMAK-ALGVDPAT----------EGPILFDLTNPKFMDAYFDNVHRP--LEK 147 (292)
T ss_pred HHHHHCCCEEEEEeCCCcccCCCcHHHHHHHH-hcCCCccc----------CCeEEecCCCHHHHHHHHHHHHHH--HHh
Confidence 99999999999999999987766677876332 22222211 122478999999999987765421 223
Q ss_pred cCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccc
Q 002442 506 TPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA 585 (921)
Q Consensus 506 ~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~ 585 (921)
.+++++|+|||||+.|.. .+..+...||. ..+++..+ .++||||||||+|+|+|||++
T Consensus 148 ~Gidg~W~D~~E~~~~~~------------~~~~~~~~~~~-------~~y~~~~~---~~~r~f~lsRs~~~G~qry~~ 205 (292)
T cd06595 148 QGVDFWWLDWQQGNRTRT------------PGLDPLWWLNH-------VHYLDSAR---NGRRPLIFSRWAGLGSHRYPI 205 (292)
T ss_pred cCCcEEEecCCCCccccc------------CCcchHHHHHH-------HHHHHhhc---cCCCcEEEEeecccCCCcCCC
Confidence 578999999999987621 11112223332 34444432 348999999999999999999
Q ss_pred eecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCC-CCCHhHHHHHhhcccccccccccCCCCC-CCCCccccCh
Q 002442 586 VWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFG-NPDTELLVRWYQLGAYYPFFRAHAHHDT-KRREPWLFGE 663 (921)
Q Consensus 586 ~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g-~~~~EL~~RW~Q~gaf~P~~R~H~~~~~-~~~ePw~~~~ 663 (921)
+|+|||.|+|++|+.+|+++|++|++|+||||+|||||.| ++++|||+||+|+|||+|+||+|++.+. .+||||.|++
T Consensus 206 ~WsGD~~s~W~~l~~~i~~~l~~~~sG~p~~g~DiGGF~~~~~~~ELy~RW~Q~gaf~P~~R~H~~~~~~~~~ePW~~g~ 285 (292)
T cd06595 206 GFSGDTIISWASLAFQPYFTATASNIGYGYWSHDIGGHMLGVTDPELYTRWIQFGVFSPILRLHSTKNPFNEKEPWLYEE 285 (292)
T ss_pred ccCCCcccCHHHHHHHHHHHHHHHhcCCCcCCCccCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCCCCccCcccCc
Confidence 9999999999999999999999999999999999999999 7999999999999999999999998765 5899999999
Q ss_pred hHHHHH
Q 002442 664 RNTQLI 669 (921)
Q Consensus 664 ~~~~~~ 669 (921)
++++++
T Consensus 286 ~~~~~~ 291 (292)
T cd06595 286 EASKIM 291 (292)
T ss_pred HHHHhh
Confidence 888765
No 20
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=100.00 E-value=4.9e-67 Score=568.08 Aligned_cols=262 Identities=41% Similarity=0.782 Sum_probs=241.7
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcce--eeCCCCCCChHHHHHHHHHcCC
Q 002442 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYF--TWDRLSFPHPEEMQRKLATKGR 433 (921)
Q Consensus 356 G~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~F--twd~~~FPdp~~m~~~L~~~G~ 433 (921)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|+.++++| +||+++||||++|+++||++|+
T Consensus 1 G~p~~~P~wa~G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f~~~~d~~~Fpdp~~~i~~l~~~g~ 80 (265)
T cd06589 1 GKPALPPKWAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDFTFDWDAGKFPNPKSMIDELHDNGV 80 (265)
T ss_pred CCCCCCcHHHHHHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCceeeeecChhhCCCHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred eEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEee
Q 002442 434 HMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWN 513 (921)
Q Consensus 434 k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~ 513 (921)
|+++|++|+| ++||.++++.. ....+++++|+
T Consensus 81 ~~~~~~~P~v----------------------------------------------~~w~~~~~~~~--~~~~Gvdg~w~ 112 (265)
T cd06589 81 KLVLWIDPYI----------------------------------------------REWWAEVVKKL--LVSLGVDGFWT 112 (265)
T ss_pred EEEEEeChhH----------------------------------------------HHHHHHHHHHh--hccCCCCEEec
Confidence 9999999988 89999988632 23467999999
Q ss_pred cCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCcc
Q 002442 514 DMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTA 593 (921)
Q Consensus 514 DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s 593 (921)
|||||+.+++.+.+.+ .. ++..++++||+|++++++++++++++.. +++|||++|||+++|+|||+++|+||+.+
T Consensus 113 D~~E~~~~~~~~~~~~--~~--~~~~~~~~hn~y~~~~~~~~~~~~~~~~-~~~r~~~~sRs~~~Gsqry~~~W~GD~~s 187 (265)
T cd06589 113 DMGEPSPGDGNIFTGG--VV--GRVKHEEMHNAYPLLYAEATYEALRKNS-KNKRPFILSRSGYAGSQRYAGMWSGDNTS 187 (265)
T ss_pred cCCCCCcCCCccccCC--cC--CCccHHHHcchhHHHHHHHHHHHHHHhc-CCCCeEEEEcCCcccccCcCceeCCcccC
Confidence 9999998865432211 11 3468999999999999999999999886 45899999999999999999999999999
Q ss_pred chhHHHhhHHHHHHHhccCCCccccCCCCCCC-CCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHH
Q 002442 594 EWEQLRVSVPMILTLGLTGMSFSGADVGGFFG-NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIR 670 (921)
Q Consensus 594 ~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g-~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r 670 (921)
+|++|+.+|+++|++|++|+||+|+|||||.+ ++++|||+||+|+|+|+|+||+|+......+|||.|++++++++|
T Consensus 188 tW~~l~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~epw~~~~~~~~~~r 265 (265)
T cd06589 188 TWGYLRSQIPAGLTMSMSGIPFVGSDIGGFTGGDPSAELYVRWFQFGAFTPIMRFHSWNSPKDTEPWAFDEEVTAIIR 265 (265)
T ss_pred CHHHHHHHHHHHHhhhccCCcccCCCcCCCCCCCCCHHHHHHHHHHhcCCcceecCCCCCCCCcCCCCcCHHHHHhhC
Confidence 99999999999999999999999999999999 899999999999999999999999998889999999999888765
No 21
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=9e-61 Score=528.08 Aligned_cols=280 Identities=24% Similarity=0.347 Sum_probs=250.0
Q ss_pred CCCccccccccccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEE
Q 002442 359 SMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTI 438 (921)
Q Consensus 359 ~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~i 438 (921)
..+|.|...+ +...+.++++|+++++++++++||||+||+|++|+++.++|+||+++||||++|+++||++|+|+++|
T Consensus 12 ~~~p~W~~W~--~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g~f~~d~~~FPdp~~mi~~l~~~G~k~~l~ 89 (303)
T cd06592 12 FRSPIWSTWA--RYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYGDFDFDPTKFPDPKGMIDQLHDLGFRVTLW 89 (303)
T ss_pred hCCCccCChh--hhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCCccccChhhCCCHHHHHHHHHHCCCeEEEE
Confidence 5789999744 34678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCChhhhHHHHHcCceeecCCC-CCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecCCC
Q 002442 439 VDPHIKRDDSYWLHNEATEKGYYVKDATK-RDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNE 517 (921)
Q Consensus 439 idP~i~~~~~y~~~~~~~~~~~~vk~~~g-~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnE 517 (921)
++|+|+.++ +.|+++.++|+|||+++| .++.+.+|||.+++||||||+|++||.++++.. ....+++++|+||||
T Consensus 90 i~P~i~~~s--~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~--~~~~Gvdg~w~D~~E 165 (303)
T cd06592 90 VHPFINTDS--ENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSL--QEKYGIDSFKFDAGE 165 (303)
T ss_pred ECCeeCCCC--HHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHH--HHHhCCcEEEeCCCC
Confidence 999999765 789999999999999998 578899999999999999999999999988632 223578999999999
Q ss_pred CCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCccchhH
Q 002442 518 PSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQ 597 (921)
Q Consensus 518 ps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s~W~~ 597 (921)
|+. +|.++.+. .+...||.|...++++.++ .+||+++||+|+|+|+++++|+||+.++|++
T Consensus 166 ~~~-------~p~~~~~~---~~~~~~n~y~~~~~~~~~~---------~~~~~~~Rsg~~g~~~~~~~w~GD~~s~W~~ 226 (303)
T cd06592 166 ASY-------LPQDYVTE---DPLLNPDEYTRLYAEMVAE---------FGDLIEVRAGWRSQGLPLFVRMMDKDSSWGG 226 (303)
T ss_pred ccc-------CCcccccC---CcccCHHHHHHHHHHHHHh---------hccceEEEeeeecCCCCeeEEcCCCCCCCCC
Confidence 973 46666665 3567899999888776532 2489999999999998889999999999998
Q ss_pred H---HhhHHHHHHHhccCCCccccC-CCCCCC-------CCCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHH
Q 002442 598 L---RVSVPMILTLGLTGMSFSGAD-VGGFFG-------NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNT 666 (921)
Q Consensus 598 L---~~si~~~L~~~l~G~p~~G~D-igGF~g-------~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~ 666 (921)
| +.+|+++|++|++|+||||+| ||||.+ .+++|||+||+|+|||+|+||+| +|||.|+++++
T Consensus 227 ~~gl~~~i~~~L~~~lsG~~~w~~D~iGGf~~~~~~~~~~~~~EL~~RW~q~g~f~P~~R~h-------~~PW~~~~e~~ 299 (303)
T cd06592 227 DNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYGGNSDDELPDKELYIRWLQLSAFLPVMQFS-------IAPWQYDDEVV 299 (303)
T ss_pred CcCHHHHHHHHHHhhccCCcccCCCccCCccccccccCCCCCHHHHHHHHHHHHhChhhhcc-------cCCccCCHHHH
Confidence 7 999999999999999999999 799975 47999999999999999999999 69999999988
Q ss_pred HHHH
Q 002442 667 QLIR 670 (921)
Q Consensus 667 ~~~r 670 (921)
+++|
T Consensus 300 ~~~~ 303 (303)
T cd06592 300 EIAK 303 (303)
T ss_pred HhhC
Confidence 8765
No 22
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=4.3e-47 Score=397.76 Aligned_cols=240 Identities=25% Similarity=0.508 Sum_probs=192.5
Q ss_pred CCCCCCccccccc-cc-c----ccCC---------------CCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeC
Q 002442 356 GMPSMPPLFSIAY-HQ-C----RWNY---------------RDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWD 414 (921)
Q Consensus 356 G~p~lpP~walG~-~q-s----rw~Y---------------~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd 414 (921)
|+|.|||+|||++ |. | -|.+ ..+.++++|+++|+++++|+.-|.-+..|-.++
T Consensus 1 g~p~~~p~~a~~~g~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y------ 74 (261)
T cd06596 1 GRPFLLPEYALYLGDADCYNRDYWRKVPEGTSDGGLNGEKESTTDDARKVADKYKENDMPLGWMLPNDGYGCGY------ 74 (261)
T ss_pred CCCccchHHHHhccchhhhccCccccCCCccccccCCCCcccchhhHHHHHHHHHhcCCCceeeccCCCCcchH------
Confidence 8999999999865 22 2 2333 224678999999999999999887776665443
Q ss_pred CCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHh
Q 002442 415 RLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWG 494 (921)
Q Consensus 415 ~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~ 494 (921)
-+.+++++.++++|++.-+|..-.+. ..-+| |
T Consensus 75 ----~~l~~~~~~~~~~g~~~glwt~~~l~-----~~~~e-------v-------------------------------- 106 (261)
T cd06596 75 ----ENLKEVVDYLHANGVETGLWTQSGLR-----DIAKE-------V-------------------------------- 106 (261)
T ss_pred ----HHHHHHHHHHHHcCCccccccccchh-----hhhhh-------h--------------------------------
Confidence 57899999999999999888431110 00000 0
Q ss_pred hhcccccccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEec
Q 002442 495 TKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLAR 574 (921)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsR 574 (921)
+..+.-....| ..+.+ . +=.|++.+++++++++++. +++|||||||
T Consensus 107 ---------~~~g~~~~k~D-----------------v~w~g--~----gy~~~l~~~ka~yeg~~~~--~~~RpfiltR 152 (261)
T cd06596 107 ---------GAAGVRARKTD-----------------VAWVG--A----GYSFALNGVKAAADGIESN--SNARPFIVTV 152 (261)
T ss_pred ---------ccCCceEEecc-----------------chhhc--c----chhHHHHHHHHHHHHHHhC--CCCCCEEEEe
Confidence 00000001111 11111 0 1146788999999999887 4599999999
Q ss_pred cccCCCCcccceecCCCccchhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHhHHHHHhhcccccccccccCCCCCC
Q 002442 575 AFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTK 654 (921)
Q Consensus 575 s~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~ 654 (921)
|+|+|+|||+++|+|||.++|++|+.+|+++|++||+|+||||+|||||+|+ ++|||+||+|+|||+|+||+|+..++.
T Consensus 153 sg~aGsQRy~~~WsGD~~stWe~Lr~sI~~~L~~gLsG~p~~G~DIGGF~g~-~~EL~vRW~Q~gaF~P~~R~h~~~~~~ 231 (261)
T cd06596 153 DGWAGTQRYAGIWTGDQSGSWEYIRFHIPTYIGSGLSGQPNTTSDVDGIFGG-SPETYTRDLQWKAFTPVLMTMSGWAAN 231 (261)
T ss_pred cCccccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhcCCCcCccccCcCCCC-CHHHHHHHHHHHHhhhhhhhccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999998899
Q ss_pred CCCccccChhHHHHHHHHHHHHHhhhHHHH
Q 002442 655 RREPWLFGERNTQLIREAIHVRYMFLPYFY 684 (921)
Q Consensus 655 ~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Y 684 (921)
+||||.|++++++++|++|++||+||||||
T Consensus 232 ~rEPW~fge~~~~i~R~~l~LRY~LlPYiY 261 (261)
T cd06596 232 DKQPWVFGEPYTSINRDYLKLKMRLMPYIY 261 (261)
T ss_pred CCCCeeCCHHHHHHHHHHHHHHHHhhCccC
Confidence 999999999999999999999999999998
No 23
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A ....
Probab=99.51 E-value=2.6e-14 Score=123.03 Aligned_cols=68 Identities=37% Similarity=0.633 Sum_probs=49.9
Q ss_pred CCceeeCCCCCCCCCCCCCCCCCCCCCcceeeeeccccccCCCCCCCCccceeEEEEeCCCCceEEEEEecCcceEEE
Q 002442 225 SDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQID 302 (921)
Q Consensus 225 ~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYg~~Pf~~~~~~~~~~~Gvf~~ns~~~~vd 302 (921)
+|++||||||+++|+++ +++|++||+|.+.+...+..+||++|||+|+++. +.++||||+|++.++||
T Consensus 1 de~~yGlGE~~~~l~~~---------g~~~~~~n~D~~~~~~~~~~~lY~siPf~~~~~s-~~~yGvf~dn~~~~~~D 68 (68)
T PF13802_consen 1 DERFYGLGERFGPLNRR---------GKRYRLWNTDAFGYNGPSSDPLYKSIPFFIAHRS-GKGYGVFFDNPSRTFFD 68 (68)
T ss_dssp T-EEEEESS-SS-SS-T---------TEEEEE-B---TSS-GTTBS-BSEEEEEEEEEEC-TCEEEEEEE-SS-EEEE
T ss_pred CCcEEcccccCCCcccC---------CcEEEEEECcCCCcCCCcCccccccEeEEEEeCC-CCEEEEEEeCCCceEEC
Confidence 47999999999999875 5799999999999886777899999999998773 68999999999999987
No 24
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=98.87 E-value=1.6e-08 Score=115.58 Aligned_cols=293 Identities=20% Similarity=0.224 Sum_probs=159.0
Q ss_pred CCHHHHHHHHHHcc----CC----CCCCcccccccccccc----CCCCHHHHHHHHHhcccCCCCceEEEeeccccC---
Q 002442 342 PGPKDVVRQYTSVT----GM----PSMPPLFSIAYHQCRW----NYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTD--- 406 (921)
Q Consensus 342 ~~p~~v~~~Y~~lt----G~----p~lpP~walG~~qsrw----~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~--- 406 (921)
....++.++|+++. -+ ..-|| .|| |.| ..-+++.+++.++.+.+.| ++.+.+|..|..
T Consensus 14 ~gl~~~s~~~h~~~r~~~~~~~~~~~~~p---v~~--nsW~~~~~d~~e~~i~~~a~~~~~~G--~e~fviDDGW~~~r~ 86 (394)
T PF02065_consen 14 QGLNGMSQRFHRFVRRHLLRPPWRDKPPP---VGW--NSWEAYYFDITEEKILELADAAAELG--YEYFVIDDGWFGGRD 86 (394)
T ss_dssp BHHHHHHHHHHHHHHHHTSTTTTTTSS-----EEE--ESHHHHTTG--HHHHHHHHHHHHHHT---SEEEE-SSSBCTES
T ss_pred CCHHHHHHHHHHHHHHhcCCCccCCCCCc---eEE--EcccccCcCCCHHHHHHHHHHHHHhC--CEEEEEcCccccccC
Confidence 35677777777762 22 12233 232 334 2347889999999997766 589999999863
Q ss_pred ----CCcceeeCCCCCCC-hHHHHHHHHHcCCeEEEEEcCCCC-CCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccc
Q 002442 407 ----GKKYFTWDRLSFPH-PEEMQRKLATKGRHMVTIVDPHIK-RDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSS 480 (921)
Q Consensus 407 ----~~~~Ftwd~~~FPd-p~~m~~~L~~~G~k~v~iidP~i~-~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~ 480 (921)
+..++..|+++||+ .+.+++.+|++|+|+.+|+.|.+- .++ .+|++- -+++++.++.....+ .+..
T Consensus 87 ~d~~~~GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~~~S--~l~~~h--Pdw~l~~~~~~~~~~----r~~~ 158 (394)
T PF02065_consen 87 DDNAGLGDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVSPDS--DLYREH--PDWVLRDPGRPPTLG----RNQY 158 (394)
T ss_dssp TTTSTTSBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEESSS--CHCCSS--BGGBTCCTTSE-ECB----TTBE
T ss_pred CCcccCCceeEChhhhCCcHHHHHHHHHHCCCeEEEEeccccccchh--HHHHhC--ccceeecCCCCCcCc----ccce
Confidence 34678999999999 899999999999999999999864 333 344332 245666544333222 2345
Q ss_pred cccCCChhHHHHHhhhcccccccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHH
Q 002442 481 YLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLL 560 (921)
Q Consensus 481 ~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~ 560 (921)
.+|+++|++++|..+.+. ......+++++..|||....- +.+..+ +...|+.+..+|. ..+.|+
T Consensus 159 vLD~~~pev~~~l~~~i~--~ll~~~gidYiK~D~n~~~~~-------~~~~~~-~~~~~~~~~~~y~------l~~~L~ 222 (394)
T PF02065_consen 159 VLDLSNPEVRDYLFEVID--RLLREWGIDYIKWDFNRDITE-------AGSPSL-PEGYHRYVLGLYR------LLDRLR 222 (394)
T ss_dssp EB-TTSHHHHHHHHHHHH--HHHHHTT-SEEEEE-TS-TTS--------SSTTS--GHHHHHHHHHHH------HHHHHH
T ss_pred EEcCCCHHHHHHHHHHHH--HHHHhcCCCEEEeccccCCCC-------CCCCCc-hHHHHHHHHHHHH------HHHHHH
Confidence 799999999999998875 222345789999999974211 111100 0111222222222 245565
Q ss_pred hhcCCCCCCeEEeccccCCCCcc--------cceecCCCccchhHHHhhHHHHHHHhccCCCcc--cc---CCCCCCCCC
Q 002442 561 KRENGKDRPFVLARAFFAGSQRY--------GAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFS--GA---DVGGFFGNP 627 (921)
Q Consensus 561 ~~~~~~~RpfilsRs~f~Gsqry--------~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~--G~---DigGF~g~~ 627 (921)
++.+ . |+--+.-.|-+|. ...|+-|+...++.++.+. ..++ .+|-. |+ ++-.-....
T Consensus 223 ~~~P---~--v~iE~CssGG~R~D~g~l~~~~~~w~SD~tda~~R~~iq~--g~s~---~~p~~~~~~hv~~~p~~~~~r 292 (394)
T PF02065_consen 223 ARFP---D--VLIENCSSGGGRFDPGMLYYTPQSWTSDNTDALERLRIQY--GTSL---FYPPEYMGAHVSASPNHQTGR 292 (394)
T ss_dssp HHTT---T--SEEEE-BTTBTTTSHHHHCCSSEEESBST-SHHHHHHHHH--HHCT---TSSGGGEEEEEEHSS-TTTHH
T ss_pred HhCC---C--cEEEeccCCCCccccchheeccccccCCccchHHHhhhhc--cccc---ccCHHHhCCeEEeccccccCC
Confidence 5542 1 3333333454443 3479999998888665543 2222 23311 11 111100011
Q ss_pred CHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHH
Q 002442 628 DTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFY 684 (921)
Q Consensus 628 ~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Y 684 (921)
...|-.|=. .+.|-. +-. .-.+-...++-.+.+++.|.+=.+..|.+-
T Consensus 293 ~~~l~~r~~-~a~~g~-~g~-------e~dl~~ls~~e~~~~~~~ia~YK~~r~li~ 340 (394)
T PF02065_consen 293 TTPLEFRAH-VAMFGR-LGL-------ELDLTKLSEEELAAVKEQIAFYKSIRPLIQ 340 (394)
T ss_dssp HGGHHHHHH-HHTCSE-EEE-------ESTGCGS-HHHHHHHHHHHHHHHHCHHHHH
T ss_pred cccceechh-hhhcCC-cee-------ccCcccCCHHHHHHHHHHHHHHHhHHHHhc
Confidence 123444432 222211 111 123344566677888999888777777655
No 25
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=98.03 E-value=6.7e-05 Score=86.13 Aligned_cols=301 Identities=16% Similarity=0.182 Sum_probs=178.8
Q ss_pred EEEeCCCHHHHHHHHHHccCCCCCCccccc---cccccccC--C--CCHHHHHHHHHhcccCCCCceEEEeeccccCC--
Q 002442 337 FFFVGPGPKDVVRQYTSVTGMPSMPPLFSI---AYHQCRWN--Y--RDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG-- 407 (921)
Q Consensus 337 y~f~G~~p~~v~~~Y~~ltG~p~lpP~wal---G~~qsrw~--Y--~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~-- 407 (921)
.+..++....+.+.|++++++--+|--|+= --+.|.|. | .+++++.+.++..+ +++++.+.||..|..+
T Consensus 260 v~~edqgl~~lsq~y~~~v~~~i~~~~~~~kprPi~~nsWea~Yfd~t~e~ile~vk~ak--k~gvE~FvlDDGwfg~rn 337 (687)
T COG3345 260 VVLEDQGLNGLSQKYAELVRMEIVPRPRVKKPRPIGWNSWEAYYFDFTEEEILENVKEAK--KFGVELFVLDDGWFGGRN 337 (687)
T ss_pred EEEcCCCcchHHHHHHHHHHhhcCcccccCCCCcceeeceeeeeecCCHHHHHHHHHHHh--hcCeEEEEEccccccccC
Confidence 344577899999999999998666522220 13447774 3 36788888888765 4558999999999733
Q ss_pred -----CcceeeCCCCCCC-hHHHHHHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCcccc
Q 002442 408 -----KKYFTWDRLSFPH-PEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSY 481 (921)
Q Consensus 408 -----~~~Ftwd~~~FPd-p~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~ 481 (921)
-+||-.|.++||. .++|++.++++|.+.-+|+-|.+-..+ -.+|++- -+++|| .+|.+.... -+...
T Consensus 338 dd~~slGDWlv~seKfPsgiE~li~~I~e~Gl~fGIWlePemvs~d-SdlfrqH--PDWvvk-~~G~p~~~~---Rnqyv 410 (687)
T COG3345 338 DDLKSLGDWLVNSEKFPSGIEELIEAIAENGLIFGIWLEPEMVSED-SDLFRQH--PDWVVK-VNGYPLMAG---RNQYV 410 (687)
T ss_pred cchhhhhceecchhhccccHHHHHHHHHHcCCccceeecchhcccc-hHHHhhC--CCeEEe-cCCcccccc---ccchh
Confidence 2467779999999 899999999999999999999875432 2677764 578888 678763211 12345
Q ss_pred ccCCChhHHHHHhhhcccccccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHh
Q 002442 482 LDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLK 561 (921)
Q Consensus 482 ~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~ 561 (921)
+|+.||.+...-.+..... .....++++.-|||-- .| -+ ++..++...... |-+ |+-+..
T Consensus 411 l~~s~p~vv~~l~~~l~ql--l~~~~v~ylkwdmnr~-l~------kl-g~~~~~~l~qqr----y~l------y~l~~~ 470 (687)
T COG3345 411 LWLSNPIVVLDLSEDLVQL--LLFHLVSYLKWDMNRE-LF------KL-GFLFWGALPQQR----YQL------YRLFDQ 470 (687)
T ss_pred hhccChHHHHHhhhHHHHH--HHhhhHHHHHHHhCcc-ee------ec-CCCCCccccchH----HHH------HHHHHH
Confidence 6777777666554433211 1112345666788841 11 11 111111111111 211 221222
Q ss_pred hcCCCCCCeEEeccccCCCCcc-------c-ceecCCCccchhHHHhhHHHHHHHhcc-CCC--ccccCCCCCCCCCCHh
Q 002442 562 RENGKDRPFVLARAFFAGSQRY-------G-AVWTGDNTAEWEQLRVSVPMILTLGLT-GMS--FSGADVGGFFGNPDTE 630 (921)
Q Consensus 562 ~~~~~~RpfilsRs~f~Gsqry-------~-~~WtGDn~s~W~~L~~si~~~L~~~l~-G~p--~~G~DigGF~g~~~~E 630 (921)
. ..+-|-|+--|+-.|..|+ + ..|+-|+...=+-|+.+ -+.+ =+| ++|+-|++ +| -
T Consensus 471 l--~~k~~~i~FeScasGg~r~d~gml~~~~~~w~Sd~~dAi~r~~iq------rg~s~~~P~~~mGaHi~~---~p--~ 537 (687)
T COG3345 471 L--NLKFPHILFESCASGGERIDKGMLEYSPQLWCSDLTDAIGRLDIQ------RGGSYTYPPESMGAHISA---VP--N 537 (687)
T ss_pred h--hhcCCCchhhhhcccccccchHHhhhcccccCCCCcchhhhcccc------ccCcccCChHHhhhhccC---CC--c
Confidence 2 1255667777777776654 3 37998886544443321 1111 245 67777776 23 2
Q ss_pred HHHHHhhccccc---ccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHH
Q 002442 631 LLVRWYQLGAYY---PFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYF 683 (921)
Q Consensus 631 L~~RW~Q~gaf~---P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~ 683 (921)
--+|||---.+- -+|++-+ -.-+|-...++-++.+.+.+.+...|-|-+
T Consensus 538 h~~~rm~~l~~rg~~a~~g~~g----~elD~~~lsdeek~~~akqialyke~r~vl 589 (687)
T COG3345 538 HQARRMTSLETRGLVAHFGFWG----YELDCTILSDEEKDLTAKQIALYKELRPVL 589 (687)
T ss_pred HHHhhhhhhhhhhHHHHhhhhc----cCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345777544432 3333322 124455556677888888888876666644
No 26
>PLN03231 putative alpha-galactosidase; Provisional
Probab=97.89 E-value=0.00022 Score=80.26 Aligned_cols=194 Identities=15% Similarity=0.116 Sum_probs=116.7
Q ss_pred CHHHHHHHHH----hcccCCCCceEEEeecccc--------------------CCCcceeeCCCCCCC------hHHHHH
Q 002442 377 DEEDVEQVDS----KFDEHDIPYDVLWLDIEHT--------------------DGKKYFTWDRLSFPH------PEEMQR 426 (921)
Q Consensus 377 ~~~~v~~v~~----~~~~~~IP~D~iwlDid~~--------------------~~~~~Ftwd~~~FPd------p~~m~~ 426 (921)
+|++|++.++ +++++|. +-|.+|..|+ |....+..|+++||+ .+.+.+
T Consensus 16 ~E~~i~~~Ad~v~~gL~~~GY--~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rFPs~~~~~G~k~lAD 93 (357)
T PLN03231 16 SEEQFLENAKIVSETLKPHGY--EYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRWPSTTGGKGFAPIAA 93 (357)
T ss_pred CHHHHHHHHHHHHcchHHhCC--EEEEECCcccccccccccccccccccccccCCCCCcccCcccCCCCccccCcHHHHH
Confidence 6888877665 4455554 7778887775 334557889999996 899999
Q ss_pred HHHHcCCeEEEEEcCCCCCCC---ChhhhHHHHHcCcee--ecCCCCCeeeeeeC-CccccccCCChhHHHHHhhhcccc
Q 002442 427 KLATKGRHMVTIVDPHIKRDD---SYWLHNEATEKGYYV--KDATKRDYDGWCWP-GSSSYLDMLNPEIRTWWGTKFSYE 500 (921)
Q Consensus 427 ~L~~~G~k~v~iidP~i~~~~---~y~~~~~~~~~~~~v--k~~~g~~~~g~~Wp-G~~~~~Dftnp~a~~Ww~~~~~~~ 500 (921)
.+|++|+|+-+.++|++.+.. ++++.-.--..|+.. +|. ..+-....|. +.-..+|..+|.+++|+....+.
T Consensus 94 yvHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs~g~~~~a~Di-a~~~~~c~~~~~~~~~v~~~~~gaq~y~~~~a~~- 171 (357)
T PLN03231 94 KVHALGLKLGIHVMRGISTTAVKKKTPILGAFKSNGHAWNAKDI-ALMDQACPWMQQCFVGVNTSSEGGKLFIQSLYDQ- 171 (357)
T ss_pred HHHhCCcceEEEecCCccchhcccCCccCCCCcccccccchhhh-ccccccccccccccccccccchhHHHHHHHHHHH-
Confidence 999999999999999987532 111100000001110 000 0000112232 22347899999999999887642
Q ss_pred cccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCC-
Q 002442 501 NYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAG- 579 (921)
Q Consensus 501 ~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~G- 579 (921)
| ...++|++..|-..+. . + .+ ...|. +..++|.+. .||+++|=+-..+
T Consensus 172 -f-A~WGVDylK~D~c~~~-----~-----~-~~---------~~~y~-----~m~~AL~~t----GRpIv~Slc~g~~~ 220 (357)
T PLN03231 172 -Y-ASWGIDFIKHDCVFGA-----E-----N-PQ---------LDEIL-----TVSKAIRNS----GRPMIYSLSPGDGA 220 (357)
T ss_pred -H-HHhCCCEEeecccCCC-----C-----c-cc---------HHHHH-----HHHHHHHHh----CCCeEEEecCCCCC
Confidence 2 2468999999954211 0 0 00 01232 233555543 5999998764111
Q ss_pred -------CCccccee--cCCCccchhHHHhhHHHH
Q 002442 580 -------SQRYGAVW--TGDNTAEWEQLRVSVPMI 605 (921)
Q Consensus 580 -------sqry~~~W--tGDn~s~W~~L~~si~~~ 605 (921)
.+.++..| +||...+|+.+...+...
T Consensus 221 ~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~ 255 (357)
T PLN03231 221 TPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVA 255 (357)
T ss_pred CchhhhhhhhhcCcccccCCcccchhhHHHHHHHH
Confidence 12344567 799999999887666544
No 27
>PLN02229 alpha-galactosidase
Probab=97.79 E-value=0.00032 Score=80.47 Aligned_cols=177 Identities=18% Similarity=0.244 Sum_probs=112.3
Q ss_pred cCCCCCCccccccccccccCC----CCHHHHHHHHHhcccCCCC---ceEEEeeccccC----CCcceeeCCCCCCC-hH
Q 002442 355 TGMPSMPPLFSIAYHQCRWNY----RDEEDVEQVDSKFDEHDIP---YDVLWLDIEHTD----GKKYFTWDRLSFPH-PE 422 (921)
Q Consensus 355 tG~p~lpP~walG~~qsrw~Y----~~~~~v~~v~~~~~~~~IP---~D~iwlDid~~~----~~~~Ftwd~~~FPd-p~ 422 (921)
.|....|| +|+ +.|+. -+|+.+++.++.+.+.|+. ++-|.+|..|+. ....+..|+++||+ .+
T Consensus 57 ngla~tPp---mGW--nSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G~l~~d~~rFP~G~k 131 (427)
T PLN02229 57 NGLARTPQ---MGW--NSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKTFPSGIK 131 (427)
T ss_pred CCccCCCC---ceE--EchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCCCEEEChhhcCCcHH
Confidence 55566777 455 34542 3788899988887554443 688999998863 34568999999997 89
Q ss_pred HHHHHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccc
Q 002442 423 EMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENY 502 (921)
Q Consensus 423 ~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~ 502 (921)
.+.+.+|++|+|+-++.|+++.+-.+| ||. .++....|+. |
T Consensus 132 ~ladyiH~~GlKfGIy~d~G~~TC~~~--------------------------pGS---~g~e~~DA~~-----f----- 172 (427)
T PLN02229 132 LLADYVHSKGLKLGIYSDAGVFTCQVR--------------------------PGS---LFHEVDDADI-----F----- 172 (427)
T ss_pred HHHHHHHHCCCceEEeccCCCcccCCC--------------------------CCC---ccHHHHHHHH-----H-----
Confidence 999999999999999999988743321 333 1222222221 1
Q ss_pred cCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEeccccCCC--
Q 002442 503 VGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS-- 580 (921)
Q Consensus 503 ~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f~Gs-- 580 (921)
...++|++..|-.-.. + .+....|+. ..++|.+. .||+++|=+.+.-.
T Consensus 173 -A~WGVDylK~D~C~~~-----------------~---~~~~~~y~~-----m~~AL~~t----GRpI~~SlC~WG~~~p 222 (427)
T PLN02229 173 -ASWGVDYLKYDNCYNL-----------------G---IKPIERYPP-----MRDALNAT----GRSIFYSLCEWGVDDP 222 (427)
T ss_pred -HHcCCCEEEecCCCCC-----------------C---cchhHHHHH-----HHHHHHhh----CCCcEEEecCCCCCCH
Confidence 1257888888865210 0 011123432 23445433 59999885443111
Q ss_pred ----Cccccee--cCCCccchhHHHhhHHHH
Q 002442 581 ----QRYGAVW--TGDNTAEWEQLRVSVPMI 605 (921)
Q Consensus 581 ----qry~~~W--tGDn~s~W~~L~~si~~~ 605 (921)
+.++..| +||...+|+.+...+...
T Consensus 223 ~~w~~~~~n~WR~s~DI~d~W~sv~~i~~~~ 253 (427)
T PLN02229 223 ALWAGKVGNSWRTTDDINDTWASMTTIADLN 253 (427)
T ss_pred HHHHHhhcCeeeccCCcccccccHHHHHHHH
Confidence 2455677 799999999887766543
No 28
>PLN02899 alpha-galactosidase
Probab=97.70 E-value=0.0011 Score=78.36 Aligned_cols=190 Identities=16% Similarity=0.173 Sum_probs=113.0
Q ss_pred CHHHHHHHHH----hcccCCCCceEEEeeccccC-----------------CCcceeeCCCCCCC------hHHHHHHHH
Q 002442 377 DEEDVEQVDS----KFDEHDIPYDVLWLDIEHTD-----------------GKKYFTWDRLSFPH------PEEMQRKLA 429 (921)
Q Consensus 377 ~~~~v~~v~~----~~~~~~IP~D~iwlDid~~~-----------------~~~~Ftwd~~~FPd------p~~m~~~L~ 429 (921)
+|+++++.++ +++++| ++-|.+|..|+. ....+.+|++|||+ .+.+.+.+|
T Consensus 46 ~E~~i~~~Ad~vs~GLk~~G--Y~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~GrLvPDp~RFPSs~~g~GmK~LADYVH 123 (633)
T PLN02899 46 SEEEFLQNAEIVSQRLLPFG--YEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEKVH 123 (633)
T ss_pred CHHHHHHHHHHHHcchHhhC--CeEEEEccccccccccccccccccccccCCCCCCccCcccCCCCccCCCcHHHHHHHH
Confidence 6777776655 444444 467788888853 23457899999995 899999999
Q ss_pred HcCCeEEEEEcCCCCCCC---Chhh--------hHHHHHcCceeecCCCCCeeeeee-CCccccccCCChhHHHHHhhhc
Q 002442 430 TKGRHMVTIVDPHIKRDD---SYWL--------HNEATEKGYYVKDATKRDYDGWCW-PGSSSYLDMLNPEIRTWWGTKF 497 (921)
Q Consensus 430 ~~G~k~v~iidP~i~~~~---~y~~--------~~~~~~~~~~vk~~~g~~~~g~~W-pG~~~~~Dftnp~a~~Ww~~~~ 497 (921)
++|.|+-+.+++++.+.. +.++ |.+ .-.++..+|- +.+-.-.-| |..---+|...+.+++|....+
T Consensus 124 skGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~-s~~~~~a~DI-a~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla 201 (633)
T PLN02899 124 AMGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEE-SGRQWRAKDI-ALKERACAWMSHGFMSVNTKLGAGKAFLRSLY 201 (633)
T ss_pred hCCcceEEEecCCCcccccccCCccccccccccccc-cccccchhhc-cccccccccCCCCcccccccccchhhhhHHHH
Confidence 999999999999986421 1111 110 0011222221 000000112 1111247888899999987765
Q ss_pred ccccccCCcCcceEeecCCCCCccCCCccccCCCcccCCcccchhhchhhhhHHHHHhHHHHHhhcCCCCCCeEEecccc
Q 002442 498 SYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFF 577 (921)
Q Consensus 498 ~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRs~f 577 (921)
+. | ...++|++..|-.-+ +..+. .-| .+..++|.+. .||+++|=|-
T Consensus 202 ~t--f-AsWGVDyLKyD~c~~------------~~~~~---------~ey-----~~ms~AL~aT----GRPIvySLsp- 247 (633)
T PLN02899 202 DQ--Y-AEWGVDFVKHDCVFG------------DDFDL---------EEI-----TYVSEVLKEL----DRPIVYSLSP- 247 (633)
T ss_pred HH--H-HHhCCCEEEEcCCCC------------CCCCh---------HHH-----HHHHHHHHHh----CCCeEEEecC-
Confidence 42 2 247899999994311 00010 112 2234566543 6999998873
Q ss_pred CCCC----------ccccee--cCCCccchhHHHhhHHHH
Q 002442 578 AGSQ----------RYGAVW--TGDNTAEWEQLRVSVPMI 605 (921)
Q Consensus 578 ~Gsq----------ry~~~W--tGDn~s~W~~L~~si~~~ 605 (921)
|.+ .++.+| +||...+|+.+...+...
T Consensus 248 -G~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~ 286 (633)
T PLN02899 248 -GTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVS 286 (633)
T ss_pred -CcccchhhhhhhhccCccceecCCcccchHHHHHHHHHH
Confidence 332 344567 699999999887765443
No 29
>PLN02692 alpha-galactosidase
Probab=97.69 E-value=0.0014 Score=75.07 Aligned_cols=96 Identities=18% Similarity=0.343 Sum_probs=72.7
Q ss_pred HHHHHHHHHHccCCCCCCccccccccccccC-C---CCHHHHHHHHHhcccCCC---CceEEEeecccc----CCCccee
Q 002442 344 PKDVVRQYTSVTGMPSMPPLFSIAYHQCRWN-Y---RDEEDVEQVDSKFDEHDI---PYDVLWLDIEHT----DGKKYFT 412 (921)
Q Consensus 344 p~~v~~~Y~~ltG~p~lpP~walG~~qsrw~-Y---~~~~~v~~v~~~~~~~~I---P~D~iwlDid~~----~~~~~Ft 412 (921)
-.++.+....--|....|| +|| |.|+ | -+++.+++.++.+.+.|+ .++-|.+|..|. +....+.
T Consensus 39 ~~~~~~~~~~~ngla~tPp---mGW--nSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G~~~ 113 (412)
T PLN02692 39 DSEILRRNLLANGLGITPP---MGW--NSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLV 113 (412)
T ss_pred hhhhhhhhcccCcCcCCCc---ceE--EchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCCCee
Confidence 3455555555567777787 455 4454 2 378889998887765544 478899998886 4456689
Q ss_pred eCCCCCCC-hHHHHHHHHHcCCeEEEEEcCCCC
Q 002442 413 WDRLSFPH-PEEMQRKLATKGRHMVTIVDPHIK 444 (921)
Q Consensus 413 wd~~~FPd-p~~m~~~L~~~G~k~v~iidP~i~ 444 (921)
.|+++||+ .+.+.+.+|++|+|+-++.|++..
T Consensus 114 ~d~~kFP~G~k~ladyiH~~GLKfGIy~d~G~~ 146 (412)
T PLN02692 114 PKKSTFPSGIKALADYVHSKGLKLGIYSDAGYF 146 (412)
T ss_pred eChhhcCCcHHHHHHHHHHCCCceEEEecCCcc
Confidence 99999998 899999999999999999988653
No 30
>PLN02808 alpha-galactosidase
Probab=97.44 E-value=0.0051 Score=70.26 Aligned_cols=85 Identities=16% Similarity=0.306 Sum_probs=66.9
Q ss_pred cCCCCCCccccccccccccC-C---CCHHHHHHHHHhcccCCCC---ceEEEeeccccC----CCcceeeCCCCCCC-hH
Q 002442 355 TGMPSMPPLFSIAYHQCRWN-Y---RDEEDVEQVDSKFDEHDIP---YDVLWLDIEHTD----GKKYFTWDRLSFPH-PE 422 (921)
Q Consensus 355 tG~p~lpP~walG~~qsrw~-Y---~~~~~v~~v~~~~~~~~IP---~D~iwlDid~~~----~~~~Ftwd~~~FPd-p~ 422 (921)
.|..+.|| +|| +.|+ | -+++.+++.++.|.+.|+. ++-|.+|..|.. ....+..|+++||+ .+
T Consensus 26 ngla~tPp---mGW--nsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~G~~ 100 (386)
T PLN02808 26 NGLGLTPQ---MGW--NSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPSGIK 100 (386)
T ss_pred CcccCCCc---ceE--EchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCccHH
Confidence 45566777 465 3343 2 3788999999988665555 899999988864 45679999999998 89
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC
Q 002442 423 EMQRKLATKGRHMVTIVDPHIK 444 (921)
Q Consensus 423 ~m~~~L~~~G~k~v~iidP~i~ 444 (921)
.+.+.+|++|+|+-++.|++..
T Consensus 101 ~lad~iH~~GlkfGiy~~~G~~ 122 (386)
T PLN02808 101 ALADYVHSKGLKLGIYSDAGTL 122 (386)
T ss_pred HHHHHHHHCCCceEEEecCCcc
Confidence 9999999999999999988643
No 31
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=91.03 E-value=1.3 Score=49.76 Aligned_cols=129 Identities=15% Similarity=0.188 Sum_probs=81.5
Q ss_pred ccccCCCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeC-----------CCCC-CChHHHHHHHHHcCCeEEE
Q 002442 370 QCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWD-----------RLSF-PHPEEMQRKLATKGRHMVT 437 (921)
Q Consensus 370 qsrw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd-----------~~~F-Pdp~~m~~~L~~~G~k~v~ 437 (921)
.+.|.-.+.+.+.++++.+++.++ .++.+|+--.+| ..+++ ...+ .|+++|++.||++|+.++.
T Consensus 4 lt~~~a~~~~~~~~~~~~i~~t~l--NavVIDvKdd~G--~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IA 79 (316)
T PF13200_consen 4 LTAYSAGSPERLDKLLDLIKRTEL--NAVVIDVKDDDG--NITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIA 79 (316)
T ss_pred echhhcCCHHHHHHHHHHHHhcCC--ceEEEEEecCCc--eEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEE
Confidence 344555677778888988888887 677778753333 33332 1233 7999999999999998877
Q ss_pred EEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeec
Q 002442 438 IVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWND 514 (921)
Q Consensus 438 iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~D 514 (921)
.|--+ + |+ ...+. ..++.+++.+|+.+... .| ..|+|-++++++++-.+..+..- ..|++.|-+|
T Consensus 80 RIv~F-k-D~---~la~~-~pe~av~~~~G~~w~d~--~~-~~WvnP~~~evw~Y~i~IA~Eaa---~~GFdEIqfD 144 (316)
T PF13200_consen 80 RIVVF-K-DP---VLAEA-HPEWAVKTKDGSVWRDN--EG-EAWVNPYSKEVWDYNIDIAKEAA---KLGFDEIQFD 144 (316)
T ss_pred EEEEe-c-Ch---HHhhh-ChhhEEECCCCCcccCC--CC-CccCCCCCHHHHHHHHHHHHHHH---HcCCCEEEee
Confidence 66322 1 21 11222 34567788888764321 23 56999999999998876543211 1345555554
No 32
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=90.83 E-value=0.58 Score=57.23 Aligned_cols=102 Identities=17% Similarity=0.265 Sum_probs=71.4
Q ss_pred EEEEEEeCCCHHHHHHHHHHccCCC----------CCCc-cccccccccccC--C--CCHHHHHHHHHhcccCCCCceEE
Q 002442 334 VDTFFFVGPGPKDVVRQYTSVTGMP----------SMPP-LFSIAYHQCRWN--Y--RDEEDVEQVDSKFDEHDIPYDVL 398 (921)
Q Consensus 334 lD~y~f~G~~p~~v~~~Y~~ltG~p----------~lpP-~walG~~qsrw~--Y--~~~~~v~~v~~~~~~~~IP~D~i 398 (921)
-=+|+-.|.+|.++++++.+.+=+- .+|. .=-||| |.|+ | -+++.|++.++.+.+.++|..-+
T Consensus 162 ~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GW--CTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~v 239 (758)
T PLN02355 162 HLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGW--CTWDAFYTNVTAEGVKQGLESLEKGGVTPKFV 239 (758)
T ss_pred eEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeE--EehhHhhccCCHHHHHHHHHHHHhCCCCccEE
Confidence 3456668999999999998763322 3443 222565 9997 3 25788999999999999999999
Q ss_pred EeeccccCCC---c-----------------ceeeCCCCCC--------------ChHHHHHHHHH-cCCeEEEE
Q 002442 399 WLDIEHTDGK---K-----------------YFTWDRLSFP--------------HPEEMQRKLAT-KGRHMVTI 438 (921)
Q Consensus 399 wlDid~~~~~---~-----------------~Ftwd~~~FP--------------dp~~m~~~L~~-~G~k~v~i 438 (921)
-+|..|..-. + .|+=|+ +|| ..+.+++.+++ .|+|.|-.
T Consensus 240 iIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~-KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~V 313 (758)
T PLN02355 240 IIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENH-KFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYV 313 (758)
T ss_pred EEeccccccccccccccccccccchhhhhhccccccc-cccccccccccccCCCCcHHHHHHHHHhhcCCcEEEE
Confidence 9998886410 0 123233 566 55778888886 78887754
No 33
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=89.49 E-value=1.1 Score=43.89 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCCCCCeeee--eeCCccccccCCChhHHHHHhhhccc
Q 002442 422 EEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGW--CWPGSSSYLDMLNPEIRTWWGTKFSY 499 (921)
Q Consensus 422 ~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~--~WpG~~~~~Dftnp~a~~Ww~~~~~~ 499 (921)
.+|++..|+.|+|++..++... +. ..++ .--++++++++|++..+. -.|| -....+. ..-++.-..+++.
T Consensus 47 ge~v~a~h~~Girv~ay~~~~~--d~--~~~~--~HPeW~~~~~~G~~~~~~~~~~~~-~~~~c~n-s~Y~e~~~~~i~E 118 (132)
T PF14871_consen 47 GEQVEACHERGIRVPAYFDFSW--DE--DAAE--RHPEWFVRDADGRPMRGERFGYPG-WYTCCLN-SPYREFLLEQIRE 118 (132)
T ss_pred HHHHHHHHHCCCEEEEEEeeec--Ch--HHHH--hCCceeeECCCCCCcCCCCcCCCC-ceecCCC-ccHHHHHHHHHHH
Confidence 7899999999999999999863 22 2232 345899999999852111 1112 1112222 2233444444321
Q ss_pred ccccCCcCcceEeecC
Q 002442 500 ENYVGSTPSLYIWNDM 515 (921)
Q Consensus 500 ~~~~g~~~~~~~W~Dm 515 (921)
.....+.||+|+||
T Consensus 119 --i~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 119 --ILDRYDVDGIFFDI 132 (132)
T ss_pred --HHHcCCCCEEEecC
Confidence 11224689999997
No 34
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=86.74 E-value=2 Score=52.81 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=71.1
Q ss_pred EEEEeCCCHHHHHHHHHHccCC-----C----CCCccccccccccccC--CC--CHHHHHHHHHhcccCCCCceEEEeec
Q 002442 336 TFFFVGPGPKDVVRQYTSVTGM-----P----SMPPLFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWLDI 402 (921)
Q Consensus 336 ~y~f~G~~p~~v~~~Y~~ltG~-----p----~lpP~walG~~qsrw~--Y~--~~~~v~~v~~~~~~~~IP~D~iwlDi 402 (921)
+|+-.|.+|.++++++.+.+-+ . .-.|.|-=|+=.|.|+ |. +++.|++.++.+.+.++|...+-+|.
T Consensus 160 v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDD 239 (775)
T PLN02219 160 VYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDD 239 (775)
T ss_pred EEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEcc
Confidence 4456799999999999887521 0 1245555445459996 33 57889999999999999999999998
Q ss_pred cccCCCc--------------------ceeeCCC--------CCC-ChHHHHHHHHH-cCCeEEEE
Q 002442 403 EHTDGKK--------------------YFTWDRL--------SFP-HPEEMQRKLAT-KGRHMVTI 438 (921)
Q Consensus 403 d~~~~~~--------------------~Ftwd~~--------~FP-dp~~m~~~L~~-~G~k~v~i 438 (921)
.|++-.. .|+=|++ .|| ..+.+++++++ .|+|.|-.
T Consensus 240 GwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~V 305 (775)
T PLN02219 240 GWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYV 305 (775)
T ss_pred CccccccccccccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEE
Confidence 8863111 1222221 355 45788989985 78887744
No 35
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=79.84 E-value=11 Score=45.81 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=57.5
Q ss_pred eeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcC-CCCCCCChhhhHHHHH------cCceeecCCCCCeee--------
Q 002442 411 FTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATE------KGYYVKDATKRDYDG-------- 472 (921)
Q Consensus 411 Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP-~i~~~~~y~~~~~~~~------~~~~vk~~~g~~~~g-------- 472 (921)
|..|+ +|-+ .++|++.+|++|+|+++=+-+ |+..+ .+.|+++.+ .++|+....+..+.+
T Consensus 66 ~~vd~-~~Gt~~df~~Lv~~ah~~Gi~vilD~V~NH~s~~--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (539)
T TIGR02456 66 RAILP-EFGTIDDFKDFVDEAHARGMRVIIDLVLNHTSDQ--HPWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDT 142 (539)
T ss_pred cccCh-hhCCHHHHHHHHHHHHHCCCEEEEEeccCcCCCC--CHHHHHHhhCCCCCCCceEEecCCCccccccccccccc
Confidence 34454 4544 467999999999998874433 44433 245665543 366765433332221
Q ss_pred --eeeC---C-----------ccccccCCChhHHHHHhhhcccccccCCcCcceEeecC
Q 002442 473 --WCWP---G-----------SSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 473 --~~Wp---G-----------~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~Dm 515 (921)
..|. + ...-+|+.||++++...+.++.. .. .++|||=+|+
T Consensus 143 ~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~vr~~l~~~~~~w--~~-~GvDGfRlDa 198 (539)
T TIGR02456 143 EKSNWTFDPVAKQYYWHRFFSHQPDLNYDNPAVHDAVHDVMRFW--LD-LGVDGFRLDA 198 (539)
T ss_pred CCCCccccCCcCeeEEecccCCCCccCCCCHHHHHHHHHHHHHH--HH-cCCCEEEEec
Confidence 1121 1 11247788999998877765432 22 3678888886
No 36
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=77.76 E-value=13 Score=41.88 Aligned_cols=132 Identities=11% Similarity=0.116 Sum_probs=75.3
Q ss_pred CHHHHHHHHHhcccCCCCceEEEeecccc----CCCcceeeC------CC---CCCChHHHHHHHHHcCCeEEEEEcCCC
Q 002442 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHT----DGKKYFTWD------RL---SFPHPEEMQRKLATKGRHMVTIVDPHI 443 (921)
Q Consensus 377 ~~~~v~~v~~~~~~~~IP~D~iwlDid~~----~~~~~Ftwd------~~---~FPdp~~m~~~L~~~G~k~v~iidP~i 443 (921)
+.+++.++++.+++.+ +-+|+++.-.. .......|. +. .|--++.|+++-|++|+++-.|+...+
T Consensus 17 ~~~~~~~~l~~l~~~~--~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~ 94 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAG--FNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGF 94 (311)
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeec
Confidence 6788999999999999 57777775431 111122221 11 132247899999999999999995444
Q ss_pred CCCCChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeec
Q 002442 444 KRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWND 514 (921)
Q Consensus 444 ~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~D 514 (921)
.....-...+.. ...+.++..|....-..=.|...|+|..+|++|++-.+.+... .....+|||=+|
T Consensus 95 ~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Ei--v~~YdvDGIhlD 161 (311)
T PF02638_consen 95 NAPDVSHILKKH--PEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEI--VKNYDVDGIHLD 161 (311)
T ss_pred CCCchhhhhhcC--chhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHH--HhcCCCCeEEec
Confidence 332111111111 1122323333221100001456799999999999998876521 112346777666
No 37
>PRK10785 maltodextrin glucosidase; Provisional
Probab=75.68 E-value=19 Score=44.31 Aligned_cols=130 Identities=13% Similarity=0.077 Sum_probs=74.3
Q ss_pred CHHHHHHHHHhcccCCCCceEEEeeccc--cCCCc-----ceeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcC-CCCC
Q 002442 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEH--TDGKK-----YFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIKR 445 (921)
Q Consensus 377 ~~~~v~~v~~~~~~~~IP~D~iwlDid~--~~~~~-----~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP-~i~~ 445 (921)
+.+-|.+-++.+++.|| ++|||--=+ ....+ ++..|+ +|.+ .++|++.+|++|+|+|+=+-+ |...
T Consensus 177 Dl~GI~~kLdYL~~LGv--~~I~L~Pif~s~s~hgYd~~Dy~~iDp-~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~ 253 (598)
T PRK10785 177 DLDGISEKLPYLKKLGV--TALYLNPIFTAPSVHKYDTEDYRHVDP-QLGGDAALLRLRHATQQRGMRLVLDGVFNHTGD 253 (598)
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCC
Confidence 45556666666666555 889986321 11122 345555 4554 568999999999998875443 4433
Q ss_pred CCChhhhHHHH-------------HcCceeecCCCCCeeeeeeCCccccc--cCCChhHHHHHhh----hcccccccCC-
Q 002442 446 DDSYWLHNEAT-------------EKGYYVKDATKRDYDGWCWPGSSSYL--DMLNPEIRTWWGT----KFSYENYVGS- 505 (921)
Q Consensus 446 ~~~y~~~~~~~-------------~~~~~vk~~~g~~~~g~~WpG~~~~~--Dftnp~a~~Ww~~----~~~~~~~~g~- 505 (921)
+. +.|++.. ..++|..+.+|. + .+|-|....| |+.||+++++..+ .+++ +...
T Consensus 254 ~~--~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~-~--~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~--Wl~~~ 326 (598)
T PRK10785 254 SH--PWFDRHNRGTGGACHHPDSPWRDWYSFSDDGR-A--LDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRH--WLKAP 326 (598)
T ss_pred CC--HHHHHhhccccccccCCCCCcceeeEECCCCC-c--CCcCCCCcCccccCCCHHHHHHHHhhhhHHHHH--hhcCC
Confidence 32 3344332 124555544442 2 3576765555 4679999988764 2321 1211
Q ss_pred cCcceEeecCC
Q 002442 506 TPSLYIWNDMN 516 (921)
Q Consensus 506 ~~~~~~W~Dmn 516 (921)
.++|||=+|.-
T Consensus 327 ~giDG~RlDva 337 (598)
T PRK10785 327 YNIDGWRLDVV 337 (598)
T ss_pred CCCcEEEEecH
Confidence 36788777754
No 38
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=73.63 E-value=9.3 Score=47.09 Aligned_cols=102 Identities=15% Similarity=0.222 Sum_probs=69.5
Q ss_pred EEEEeCCCHHHHHHHHHHccCCC---------CCCccccccccccccC--CC--CHHHHHHHHHhcccCCCCceEEEeec
Q 002442 336 TFFFVGPGPKDVVRQYTSVTGMP---------SMPPLFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWLDI 402 (921)
Q Consensus 336 ~y~f~G~~p~~v~~~Y~~ltG~p---------~lpP~walG~~qsrw~--Y~--~~~~v~~v~~~~~~~~IP~D~iwlDi 402 (921)
+|+-.|.+|-+++++=.+..-+. .-+|.|-=|+=.|.|+ |. +++.|++.++.+.+.++|..-+-+|.
T Consensus 163 ~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDD 242 (750)
T PLN02684 163 LFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDD 242 (750)
T ss_pred EEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 46678999999988764432111 1244454444459996 33 57889999999999999999999998
Q ss_pred cccCCCc-----------------c--eeeCCCCCC-------ChHHHHHHHH-HcCCeEEEE
Q 002442 403 EHTDGKK-----------------Y--FTWDRLSFP-------HPEEMQRKLA-TKGRHMVTI 438 (921)
Q Consensus 403 d~~~~~~-----------------~--Ftwd~~~FP-------dp~~m~~~L~-~~G~k~v~i 438 (921)
.|.+-.. . |.=+ .+|| ..+.+++.|+ +.|+|.|-.
T Consensus 243 GwQs~~~d~~~~~~~~~~~q~~~rL~~f~en-~KF~~~~~p~~Glk~~V~~iK~~~~vk~V~V 304 (750)
T PLN02684 243 GWQSVGGDPTVEAGDEKKEQPLLRLTGIKEN-EKFKKKDDPNVGIKNIVNIAKEKHGLKYVYV 304 (750)
T ss_pred ccccccccccccccccccchhhhhhccCccc-cccccccCCCccHHHHHHHHHhhcCCcEEEE
Confidence 8863211 1 2222 4565 5678899987 578887744
No 39
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=65.97 E-value=13 Score=45.97 Aligned_cols=69 Identities=17% Similarity=0.374 Sum_probs=50.9
Q ss_pred EEEEeCCCHHHHHHHHHHc----cCC------CCCCc-cccccccccccC--CC--CHHHHHHHHHhcccCCCCceEEEe
Q 002442 336 TFFFVGPGPKDVVRQYTSV----TGM------PSMPP-LFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWL 400 (921)
Q Consensus 336 ~y~f~G~~p~~v~~~Y~~l----tG~------p~lpP-~walG~~qsrw~--Y~--~~~~v~~v~~~~~~~~IP~D~iwl 400 (921)
+|+-.|.+|-+++++=.+. +|. -.+|. +=-||| |.|+ |. +++.|++-++.+.+.|||..-+.+
T Consensus 174 ~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGW--CTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vII 251 (777)
T PLN02711 174 LYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGW--CTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLI 251 (777)
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceE--EehhHhcccCCHHHHHHHHHHHHhCCCCccEEEE
Confidence 4666899999998875544 222 12442 344565 9996 43 578899999999999999999999
Q ss_pred eccccC
Q 002442 401 DIEHTD 406 (921)
Q Consensus 401 Did~~~ 406 (921)
|..|.+
T Consensus 252 DDGWQs 257 (777)
T PLN02711 252 DDGWQS 257 (777)
T ss_pred cCCccc
Confidence 988864
No 40
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=65.91 E-value=36 Score=41.38 Aligned_cols=132 Identities=15% Similarity=0.216 Sum_probs=70.0
Q ss_pred CHHHHHHHHHhcccCCCCceEEEeeccccC-----CC---cceeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcC-CCC
Q 002442 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHTD-----GK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIK 444 (921)
Q Consensus 377 ~~~~v~~v~~~~~~~~IP~D~iwlDid~~~-----~~---~~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP-~i~ 444 (921)
+...+.+-++.+++.|| ++|||--=+.. ++ .++..|+ +|-+ .++|++.+|++|+|+++=+-| |..
T Consensus 25 ~~~gi~~~l~yl~~lG~--~~i~l~Pi~~~~~~~~gY~~~d~~~id~-~~Gt~~~~~~lv~~ah~~gi~vilD~v~NH~~ 101 (543)
T TIGR02403 25 DLRGIIEKLDYLKKLGV--DYIWLNPFYVSPQKDNGYDVSDYYAINP-LFGTMADFEELVSEAKKRNIKIMLDMVFNHTS 101 (543)
T ss_pred CHHHHHHhHHHHHHcCC--CEEEECCcccCCCCCCCCCccccCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 33444444555555443 66776532211 11 1244555 3544 568999999999998875544 444
Q ss_pred CCCChhhhHHHHH-----cCceeec-CCCCC-------eeeeeeCCc--------------cccccCCChhHHHHHhhhc
Q 002442 445 RDDSYWLHNEATE-----KGYYVKD-ATKRD-------YDGWCWPGS--------------SSYLDMLNPEIRTWWGTKF 497 (921)
Q Consensus 445 ~~~~y~~~~~~~~-----~~~~vk~-~~g~~-------~~g~~WpG~--------------~~~~Dftnp~a~~Ww~~~~ 497 (921)
.+ .+.++++.+ +++|+-. ..|.+ +.+..|.+. ..-+|+.||++++.-.+.+
T Consensus 102 ~~--~~~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v~~~i~~~~ 179 (543)
T TIGR02403 102 TE--HEWFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQADLNWENPEVREELKDVV 179 (543)
T ss_pred cc--hHHHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCCccCCCCHHHHHHHHHHH
Confidence 32 244555542 3455432 22221 112223321 1236778999998776665
Q ss_pred ccccccCCcCcceEeecCC
Q 002442 498 SYENYVGSTPSLYIWNDMN 516 (921)
Q Consensus 498 ~~~~~~g~~~~~~~W~Dmn 516 (921)
++-. . .++|||=+|.-
T Consensus 180 ~~W~--~-~giDGfRlDa~ 195 (543)
T TIGR02403 180 NFWR--D-KGVDGFRLDVI 195 (543)
T ss_pred HHHH--H-cCCCEEEEeee
Confidence 4321 1 36788878854
No 41
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=64.24 E-value=9.9 Score=43.71 Aligned_cols=126 Identities=18% Similarity=0.103 Sum_probs=69.7
Q ss_pred HHHHHHHHHhcccCCCCceEE-Eee---ccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCCChhhhH
Q 002442 378 EEDVEQVDSKFDEHDIPYDVL-WLD---IEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHN 453 (921)
Q Consensus 378 ~~~v~~v~~~~~~~~IP~D~i-wlD---id~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~ 453 (921)
.+++++.++.|++.||-+=.| .+. ++=..|+-+|+| .+.+++.++++|+|+++.+-.+- .+.+-
T Consensus 9 ~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~~-------lD~~l~~a~~~Gi~viL~~~~~~-----~P~Wl 76 (374)
T PF02449_consen 9 EEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFSW-------LDRVLDLAAKHGIKVILGTPTAA-----PPAWL 76 (374)
T ss_dssp CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---HH-------HHHHHHHHHCTT-EEEEEECTTT-----S-HHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecHH-------HHHHHHHHHhccCeEEEEecccc-----cccch
Confidence 467889999999999976664 223 333345444444 78999999999999988764221 12221
Q ss_pred HHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhccc--ccccCCcCcceEeecCCCCCc
Q 002442 454 EATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSY--ENYVGSTPSLYIWNDMNEPSV 520 (921)
Q Consensus 454 ~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~--~~~~g~~~~~~~W~DmnEps~ 520 (921)
.-.--+....+.+|... -.|.....++.+|..++.....++. ..+.+.-.+.++-+| |||..
T Consensus 77 ~~~~Pe~~~~~~~g~~~----~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~-NE~~~ 140 (374)
T PF02449_consen 77 YDKYPEILPVDADGRRR----GFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQID-NEPGY 140 (374)
T ss_dssp HCCSGCCC-B-TTTSBE----ECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEC-CSTTC
T ss_pred hhhcccccccCCCCCcC----ccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEec-cccCc
Confidence 11112445556667643 2344556788999988877665431 123332233444444 78765
No 42
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=63.65 E-value=14 Score=41.49 Aligned_cols=101 Identities=13% Similarity=0.225 Sum_probs=59.3
Q ss_pred CceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCCChhhh-HHHH---HcCceeecCCCCC
Q 002442 394 PYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLH-NEAT---EKGYYVKDATKRD 469 (921)
Q Consensus 394 P~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~-~~~~---~~~~~vk~~~g~~ 469 (921)
++|.+.+|.++... +...|. ++-++.||+.|.+++..+.-+-- ..|+.| ++.. ...++ |..
T Consensus 64 ~~d~vVID~~~~g~------~~~~fs--~~~i~~Lk~~g~~viaYlSvGe~--E~~R~y~~~~~~~~~~~~l-----~~~ 128 (315)
T TIGR01370 64 PFELVVIDYSKDGT------EDGTYS--PEEIVRAAAAGRWPIAYLSIGAA--EDYRFYWQKGWKVNAPAWL-----GNE 128 (315)
T ss_pred CCCEEEEccccccC------cccCCC--HHHHHHHHhCCcEEEEEEEchhc--cccchhhhhhhhcCCHHHh-----CCC
Confidence 58888888665311 111232 35677899999999988764322 233333 2211 11122 222
Q ss_pred eeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecC
Q 002442 470 YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 470 ~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~Dm 515 (921)
.. -|||+ .++|+.+|+-++...+.+..... .|++|+.+|.
T Consensus 129 n~--~W~g~-~~vd~~~~~W~~il~~rl~~l~~---kGfDGvfLD~ 168 (315)
T TIGR01370 129 DP--DWPGN-YDVKYWDPEWKAIAFSYLDRVIA---QGFDGVYLDL 168 (315)
T ss_pred CC--CCCCc-eeEecccHHHHHHHHHHHHHHHH---cCCCeEeecc
Confidence 22 39986 79999999977777776543222 3578888775
No 43
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=59.10 E-value=32 Score=42.43 Aligned_cols=96 Identities=20% Similarity=0.240 Sum_probs=51.3
Q ss_pred eeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcC-CCCCCCChhhhHHHHHcC-ceeecCCCCCeeeeeeCCccccccCC
Q 002442 411 FTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATEKG-YYVKDATKRDYDGWCWPGSSSYLDML 485 (921)
Q Consensus 411 Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP-~i~~~~~y~~~~~~~~~~-~~vk~~~g~~~~g~~WpG~~~~~Dft 485 (921)
|..++ +|.. .++||+.+|++|+++|+-+-+ |...+... +..-.... |+..+..... ...| | ..-+|+.
T Consensus 196 ~~~~~-~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~--~~~~~~~~~y~~~~~~~~~--~~~w-~-~~~~~~~ 268 (613)
T TIGR01515 196 YAPTS-RFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHG--LAEFDGTPLYEHKDPRDGE--HWDW-G-TLIFDYG 268 (613)
T ss_pred ccccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccch--hhccCCCcceeccCCccCc--CCCC-C-CceecCC
Confidence 44433 6664 568999999999999986654 44433211 11000001 1222211100 1123 2 3467999
Q ss_pred ChhHHHHHhhhcccccccCCcCcceEeecC
Q 002442 486 NPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 486 np~a~~Ww~~~~~~~~~~g~~~~~~~W~Dm 515 (921)
||++|++..+.+.+ +....++|||=+|+
T Consensus 269 ~~~Vr~~l~~~~~~--W~~ey~iDG~R~D~ 296 (613)
T TIGR01515 269 RPEVRNFLVANALY--WAEFYHIDGLRVDA 296 (613)
T ss_pred CHHHHHHHHHHHHH--HHHHhCCcEEEEcC
Confidence 99999987776542 12223567777775
No 44
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=57.94 E-value=4.6 Score=50.05 Aligned_cols=160 Identities=5% Similarity=-0.238 Sum_probs=104.8
Q ss_pred HHHhHHHHHhhcCCCCCCeEEeccccCCCCcccceecCCCcc-chhHHHhhHHHHHHHhccCCCccccCCCCCCCCCCHh
Q 002442 552 HMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTA-EWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTE 630 (921)
Q Consensus 552 ~~at~~~l~~~~~~~~RpfilsRs~f~Gsqry~~~WtGDn~s-~W~~L~~si~~~L~~~l~G~p~~G~DigGF~g~~~~E 630 (921)
..+.+...+... ..++.+-++ +.....++.+.+|.+++.+ -|.+ -.++.- ..+..+..++...+++|.-....++
T Consensus 473 ~~~lyg~~~aia-t~~a~~~v~-~kr~~i~srsTf~g~g~y~~hwlg-dn~~~w-~~L~~sI~gml~fnl~Gip~Vg~Di 548 (805)
T KOG1065|consen 473 THNLYGYSEAIA-THQALVDVP-GKRSFILSRSTFVGSGRYAGHWLG-DNTARW-EDLQTSISGMLEFNLFGIPMVGSDI 548 (805)
T ss_pred hhhhHhHHHhhh-hhccceecc-ccccccccccceecccccceeecc-ccccee-hhccccchhhhcccccCCCccchhh
Confidence 344555555543 446665555 8888999999998776655 4543 333333 5666666667888899987766667
Q ss_pred HHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCcccccccccCCCCcc
Q 002442 631 LLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDES 710 (921)
Q Consensus 631 L~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~ 710 (921)
++ ++|...|..++|-.....-..+..+ .......|..+..|++ +.+++.......+.++-+++.++||....
T Consensus 549 cg----f~~~~~eELc~RW~q~gaF~Pf~R~-hn~~~~~~qe~~~~~s---v~~a~r~~~~~ry~~lP~lytl~~~A~~s 620 (805)
T KOG1065|consen 549 CG----FLGPPTEELCLRWLQLGAFYPFSRN-HNSPGEPRQEPYTWSS---VAEAARNALTLRYTLLPYLYTLFYRAHVS 620 (805)
T ss_pred hc----CCCCCCHHHHHHHHHhccCCchhhc-cCCCCCcccChhhHHH---HHHHHHHhhhheeeehhhHHHhhhhhhhc
Confidence 66 8999999888885443322333222 2233344455556666 78888888888999999999999987765
Q ss_pred ccccCceeeecCc
Q 002442 711 TFTNDEAFMVGNA 723 (921)
Q Consensus 711 ~~~~~~qfm~G~~ 723 (921)
-..+..+.|++-.
T Consensus 621 G~pV~RPlf~~fP 633 (805)
T KOG1065|consen 621 GEPVARPLFFEFP 633 (805)
T ss_pred CCcceeeeeeecC
Confidence 5555555555543
No 45
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=56.66 E-value=51 Score=40.18 Aligned_cols=132 Identities=17% Similarity=0.294 Sum_probs=67.1
Q ss_pred CHHHHHHHHHhcccCCCCceEEEeecccc-----CCC---cceeeCCCCCC---ChHHHHHHHHHcCCeEEEEEcC-CCC
Q 002442 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHT-----DGK---KYFTWDRLSFP---HPEEMQRKLATKGRHMVTIVDP-HIK 444 (921)
Q Consensus 377 ~~~~v~~v~~~~~~~~IP~D~iwlDid~~-----~~~---~~Ftwd~~~FP---dp~~m~~~L~~~G~k~v~iidP-~i~ 444 (921)
+-..+.+-++.+++.|| ++|||--=+. .|+ .++..|+ +|- +.++|++.+|++|+|+++=+-+ |..
T Consensus 31 dl~gi~~~ldyl~~lGv--~~i~l~P~~~~~~~~~gY~~~d~~~id~-~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH~s 107 (551)
T PRK10933 31 DLRGVTQRLDYLQKLGV--DAIWLTPFYVSPQVDNGYDVANYTAIDP-TYGTLDDFDELVAQAKSRGIRIILDMVFNHTS 107 (551)
T ss_pred CHHHHHHhhHHHHhCCC--CEEEECCCCCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCCcc
Confidence 33444455555555554 6777642111 011 1233443 344 3578999999999998875443 333
Q ss_pred CCCChhhhHHHHH-----cCceeecCC--CC---C----eee--eeeCC------------ccccccCCChhHHHHHhhh
Q 002442 445 RDDSYWLHNEATE-----KGYYVKDAT--KR---D----YDG--WCWPG------------SSSYLDMLNPEIRTWWGTK 496 (921)
Q Consensus 445 ~~~~y~~~~~~~~-----~~~~vk~~~--g~---~----~~g--~~WpG------------~~~~~Dftnp~a~~Ww~~~ 496 (921)
.+ .+.|+++.+ .++|+.... +. . +.+ |-|.. ...-+|+.||++++...+.
T Consensus 108 ~~--~~wf~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdLn~~np~V~~~l~~~ 185 (551)
T PRK10933 108 TQ--HAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKV 185 (551)
T ss_pred Cc--hhHHHhhcCCCCCCcCceEecCCCCCCCCCcccccCCCccccccCCCCceEeecccccCCccCCCCHHHHHHHHHH
Confidence 22 234554421 245553210 00 0 111 11211 1224677899999877776
Q ss_pred cccccccCCcCcceEeecCC
Q 002442 497 FSYENYVGSTPSLYIWNDMN 516 (921)
Q Consensus 497 ~~~~~~~g~~~~~~~W~Dmn 516 (921)
+++.. ..++|||=+|.-
T Consensus 186 ~~~W~---~~GvDGfRlDa~ 202 (551)
T PRK10933 186 CEFWA---DRGVDGLRLDVV 202 (551)
T ss_pred HHHHH---HCCCcEEEEcch
Confidence 55321 146778777754
No 46
>PLN00196 alpha-amylase; Provisional
Probab=56.59 E-value=92 Score=36.73 Aligned_cols=60 Identities=12% Similarity=0.221 Sum_probs=40.7
Q ss_pred HHHHHHHHHhcccCCCCceEEEeeccc--cC--CC---cceeeCCCCCCC---hHHHHHHHHHcCCeEEEEE
Q 002442 378 EEDVEQVDSKFDEHDIPYDVLWLDIEH--TD--GK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIV 439 (921)
Q Consensus 378 ~~~v~~v~~~~~~~~IP~D~iwlDid~--~~--~~---~~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~ii 439 (921)
-..+.+-+..+++.|| ++|||---. .. |+ .+|..|+.+|-+ .++|++.+|++|+|+++=+
T Consensus 43 ~~~i~~kldyL~~LGv--taIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 43 YNFLMGKVDDIAAAGI--THVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred HHHHHHHHHHHHHcCC--CEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3456666777777776 899997321 11 22 235566667874 5679999999999988743
No 47
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.16 E-value=46 Score=38.88 Aligned_cols=118 Identities=9% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHhcccCCCCce--EEEeeccccCCCcceee--C-------CCCCCChHHHHHHHHHcCCeEEEEEcCCCC
Q 002442 376 RDEEDVEQVDSKFDEHDIPYD--VLWLDIEHTDGKKYFTW--D-------RLSFPHPEEMQRKLATKGRHMVTIVDPHIK 444 (921)
Q Consensus 376 ~~~~~v~~v~~~~~~~~IP~D--~iwlDid~~~~~~~Ftw--d-------~~~FPdp~~m~~~L~~~G~k~v~iidP~i~ 444 (921)
.++.++.+.++++++.|+--= .+|.+=+-..-....-| + ...|--.+.|+++-|++|+++..|+.|+..
T Consensus 61 ~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~DpLa~~I~~AHkr~l~v~aWf~~~~~ 140 (418)
T COG1649 61 FQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDPLAFVIAEAHKRGLEVHAWFNPYRM 140 (418)
T ss_pred ccHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCChHHHHHHHHHhcCCeeeechhhccc
Confidence 467888899999998888542 33444221111111111 1 112323468999999999999999999886
Q ss_pred CCCChhhhHHHH-HcCceeecCCCCCeeeeeeCC--ccccccCCChhHHHHHhhhcc
Q 002442 445 RDDSYWLHNEAT-EKGYYVKDATKRDYDGWCWPG--SSSYLDMLNPEIRTWWGTKFS 498 (921)
Q Consensus 445 ~~~~y~~~~~~~-~~~~~vk~~~g~~~~g~~WpG--~~~~~Dftnp~a~~Ww~~~~~ 498 (921)
.... -.... .......+..|..+.-. +| .-.|+|-.+|++++|..+.+.
T Consensus 141 a~~~---s~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~ldPg~Pevq~~i~~lv~ 192 (418)
T COG1649 141 APPT---SPLTKRHPHWLTTKRPGWVYVRH--QGWGKRVWLDPGIPEVQDFITSLVV 192 (418)
T ss_pred CCCC---ChhHhhCCCCcccCCCCeEEEec--CCceeeeEeCCCChHHHHHHHHHHH
Confidence 4321 11121 12233333344433210 12 578999999999999998764
No 48
>PRK03705 glycogen debranching enzyme; Provisional
Probab=54.01 E-value=19 Score=44.64 Aligned_cols=91 Identities=16% Similarity=0.249 Sum_probs=51.8
Q ss_pred ChHHHHHHHHHcCCeEEEEEcC-CCCCC---CChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhh
Q 002442 420 HPEEMQRKLATKGRHMVTIVDP-HIKRD---DSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~iidP-~i~~~---~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~ 495 (921)
+.++||+.+|++|+++|+=+-. |.... ..+..++......||-.+.+|. |. .|.|-..-+++.||.++++..+
T Consensus 243 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~-~~--~~~g~g~~ln~~~p~Vr~~iid 319 (658)
T PRK03705 243 EFRDAVKALHKAGIEVILDVVFNHSAELDLDGPTLSLRGIDNRSYYWIREDGD-YH--NWTGCGNTLNLSHPAVVDWAID 319 (658)
T ss_pred HHHHHHHHHHHCCCEEEEEEcccCccCcCCCCcchhcccCCCccceEECCCCC-cC--CCCCccCcccCCCHHHHHHHHH
Confidence 4688999999999998874432 33221 1111111112234555555554 22 3444444678889999987776
Q ss_pred hcccccccCCcCcceEeecC
Q 002442 496 KFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~Dm 515 (921)
.+++ +....++|||=+|.
T Consensus 320 ~l~~--W~~e~gVDGFRfD~ 337 (658)
T PRK03705 320 CLRY--WVETCHVDGFRFDL 337 (658)
T ss_pred HHHH--HHHHhCCCEEEEEc
Confidence 6543 12223567777773
No 49
>PRK10265 chaperone-modulator protein CbpM; Provisional
Probab=52.03 E-value=24 Score=32.84 Aligned_cols=45 Identities=20% Similarity=0.349 Sum_probs=36.8
Q ss_pred CCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhh
Q 002442 627 PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMF 679 (921)
Q Consensus 627 ~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~L 679 (921)
-+++++.+|.++|..-|--. ..+-|.|.+.....++++.++|+.|
T Consensus 19 i~~~~l~eLve~GlIep~~~--------~~~~~~F~~~~l~r~~~a~rL~~dl 63 (101)
T PRK10265 19 VSEEELNEIVGLGVIEPREI--------QETTWVFDDHAAIVVQRAVRLRHEL 63 (101)
T ss_pred cCHHHHHHHHHCCCeecCCC--------CcccceECHHHHHHHHHHHHHHHHc
Confidence 57999999999999998321 2356999887889999999999864
No 50
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=49.54 E-value=36 Score=37.00 Aligned_cols=127 Identities=17% Similarity=0.216 Sum_probs=67.7
Q ss_pred HHHHHHhcccCCCCceEEEeeccc-----cCCC---cceeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcC-CCCCCCC
Q 002442 381 VEQVDSKFDEHDIPYDVLWLDIEH-----TDGK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIKRDDS 448 (921)
Q Consensus 381 v~~v~~~~~~~~IP~D~iwlDid~-----~~~~---~~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP-~i~~~~~ 448 (921)
+.+-++.+++.|| ++|||--=+ -.|+ -++..|+ +|-+ .++|++.+|++|+|+|+=+-+ |...+.
T Consensus 6 i~~kLdyl~~lGv--~~I~l~Pi~~~~~~~~gY~~~d~~~vd~-~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~~- 81 (316)
T PF00128_consen 6 IIDKLDYLKDLGV--NAIWLSPIFESPNGYHGYDPSDYYAVDP-RFGTMEDFKELVDAAHKRGIKVILDVVPNHTSDDH- 81 (316)
T ss_dssp HHHTHHHHHHHTE--SEEEESS-EESSSSTTTTSESEEEEEST-TTBHHHHHHHHHHHHHHTTCEEEEEEETSEEETTS-
T ss_pred HHHhhHHHHHcCC--Cceecccccccccccccccceeeecccc-ccchhhhhhhhhhccccccceEEEeeecccccccc-
Confidence 3333445555454 778875211 1121 1245565 5554 468999999999999986655 454433
Q ss_pred hhhhHHHHH------cCceeecC-----C--------CCCeeeeeeC----C--ccccccCCChhHHHHHhhhccccccc
Q 002442 449 YWLHNEATE------KGYYVKDA-----T--------KRDYDGWCWP----G--SSSYLDMLNPEIRTWWGTKFSYENYV 503 (921)
Q Consensus 449 y~~~~~~~~------~~~~vk~~-----~--------g~~~~g~~Wp----G--~~~~~Dftnp~a~~Ww~~~~~~~~~~ 503 (921)
..+++..+ .++++..+ . +..+....|. . ...-+|+.||++++...+.+++..-.
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~i~~~~~~w~~~ 160 (316)
T PF00128_consen 82 -PWFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYSYFGGSNWEYDDWGDEYQFWSDLPDLNYENPEVREYIIDVLKFWIEE 160 (316)
T ss_dssp -HHHHHHHTHTTSTTGTTBEEESBTSTTSSTBBCSTTTSSEESCHHTHCHSSSTTSEEBETTSHHHHHHHHHHHHHHHHT
T ss_pred -ccccccccccccccccceeecccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhcccccchhhc
Confidence 33443332 34555321 1 1122221111 1 12346788999999888865532212
Q ss_pred CCcCcceEeecC
Q 002442 504 GSTPSLYIWNDM 515 (921)
Q Consensus 504 g~~~~~~~W~Dm 515 (921)
++|||=+|+
T Consensus 161 ---giDGfR~D~ 169 (316)
T PF00128_consen 161 ---GIDGFRLDA 169 (316)
T ss_dssp ---TESEEEETT
T ss_pred ---eEeEEEEcc
Confidence 267776665
No 51
>cd06416 GH25_Lys1-like Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans.
Probab=48.17 E-value=22 Score=36.94 Aligned_cols=72 Identities=18% Similarity=0.221 Sum_probs=47.2
Q ss_pred ccccccC--CCCHHHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCC-CChHHHHHHHHHcCCeEEEEEcC
Q 002442 368 YHQCRWN--YRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSF-PHPEEMQRKLATKGRHMVTIVDP 441 (921)
Q Consensus 368 ~~qsrw~--Y~~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~F-Pdp~~m~~~L~~~G~k~v~iidP 441 (921)
||-++-. ...++++...++.++..++..+.+|+|++...+. ++-+...- .-.+++++.+++.|.+.++...+
T Consensus 58 Yhf~~~~~~~~~~~Qa~~f~~~~~~~~~~~~~i~lDiE~~~~~--~~~~~~~~~~~~~~f~~~~~~~G~~~~iYt~~ 132 (196)
T cd06416 58 YFFPCINCCGSAAGQVQTFLQYLKANGIKYGTVWIDIEQNPCQ--WSSDVASNCQFLQELVSAAKALGLKVGIYSSQ 132 (196)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhCCCceeEEEEEEecCCCC--CcCCHHHHHHHHHHHHHHHHHhCCeEEEEcCc
Confidence 6766544 4456788888888887777778899999976321 11111100 01356778888889998887765
No 52
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=46.54 E-value=26 Score=43.10 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=49.8
Q ss_pred ChHHHHHHHHHcCCeEEEEEcC-CCCCCCChhhhHHHHHcCceee-cCCCCCeeeeeeCCccccccCCChhHHHHHhhhc
Q 002442 420 HPEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATEKGYYVK-DATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKF 497 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~iidP-~i~~~~~y~~~~~~~~~~~~vk-~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~ 497 (921)
+.++||+.+|++|+++|+=+-+ |..... ...|+... .++|.+ +.+|....+ .|-..-+++.||+++++..+.+
T Consensus 230 efk~lV~~~H~~Gi~VilDvV~NH~~~~~-~~~f~~~~-~~~~~~~~~~g~~~~~---~g~~~~~~~~~~~v~~~i~~~~ 304 (605)
T TIGR02104 230 ELKQMIQALHENGIRVIMDVVYNHTYSRE-ESPFEKTV-PGYYYRYNEDGTLSNG---TGVGNDTASEREMMRKFIVDSV 304 (605)
T ss_pred HHHHHHHHHHHCCCEEEEEEEcCCccCCC-CCcccCCC-CCeeEEECCCCCccCC---CcccCCcccCCHHHHHHHHHHH
Confidence 4689999999999998875443 443211 12333222 244443 444542211 2222346788999998877655
Q ss_pred ccccccCCcCcceEeecC
Q 002442 498 SYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 498 ~~~~~~g~~~~~~~W~Dm 515 (921)
++ +....++|||=+|.
T Consensus 305 ~~--W~~e~~iDGfR~D~ 320 (605)
T TIGR02104 305 LY--WVKEYNIDGFRFDL 320 (605)
T ss_pred HH--HHHHcCCCEEEEec
Confidence 42 12223567776664
No 53
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=38.88 E-value=40 Score=44.29 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=50.3
Q ss_pred hHHHHHHHHHcCCeEEEEEcC-CCCCCCChhhhHHHHHcCcee-ecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcc
Q 002442 421 PEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATEKGYYV-KDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFS 498 (921)
Q Consensus 421 p~~m~~~L~~~G~k~v~iidP-~i~~~~~y~~~~~~~~~~~~v-k~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~ 498 (921)
.++||+.||++|+++|+=+-+ |.... ..|+.. ..+||- .+.+|..... |.|. -++..+|.+|++..+.+.
T Consensus 557 fK~LV~alH~~GI~VILDVVyNHt~~~---~~f~~~-~p~Yy~~~~~~G~~~~~--~~g~--~l~~e~~~vrk~iiDsl~ 628 (1111)
T TIGR02102 557 FKNLINEIHKRGMGVILDVVYNHTAKV---YIFEDL-EPNYYHFMDADGTPRTS--FGGG--RLGTTHEMSRRILVDSIK 628 (1111)
T ss_pred HHHHHHHHHHCCCEEEEeccccccccc---cccccc-CCCceEeeCCCCCcccc--cCCC--CCCcCCHHHHHHHHHHHH
Confidence 679999999999998874432 33322 233332 234543 4556665433 3232 477889998887666554
Q ss_pred cccccCCcCcceEeecC
Q 002442 499 YENYVGSTPSLYIWNDM 515 (921)
Q Consensus 499 ~~~~~g~~~~~~~W~Dm 515 (921)
+ +....++|||=+|+
T Consensus 629 y--Wv~ey~VDGFRfDl 643 (1111)
T TIGR02102 629 Y--LVDEFKVDGFRFDM 643 (1111)
T ss_pred H--HHHhcCCcEEEEec
Confidence 2 22224567777774
No 54
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=38.47 E-value=44 Score=44.62 Aligned_cols=91 Identities=12% Similarity=0.062 Sum_probs=50.0
Q ss_pred ChHHHHHHHHHcCCeEEEEEcC-CCCCCCChhhh--HHHHH-cCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhh
Q 002442 420 HPEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLH--NEATE-KGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~iidP-~i~~~~~y~~~--~~~~~-~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~ 495 (921)
+.++||+.+|++|+++|+=+-+ |...+..+.+. ..+.+ ..||-.+. +.+..-.+|-|-...+|+.+|.++++-.+
T Consensus 248 efk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~~~yy~~~~-~~~~~y~~~~G~gn~~n~~~p~v~~~i~d 326 (1221)
T PRK14510 248 EFAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDNSPYYRLEP-GNPKEYENWWGCGNLPNLERPFILRLPMD 326 (1221)
T ss_pred HHHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCCCCceEecC-CCCCcccCCCCCCCccccCCHHHHHHHHH
Confidence 4689999999999998875433 33322211100 01111 22333222 22111123556666899999999887766
Q ss_pred hcccccccCCcCcceEeec
Q 002442 496 KFSYENYVGSTPSLYIWND 514 (921)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~D 514 (921)
.+++ +.. .++|||=+|
T Consensus 327 ~lr~--Wv~-~gVDGfRfD 342 (1221)
T PRK14510 327 VLRS--WAK-RGVDGFRLD 342 (1221)
T ss_pred HHHH--HHH-hCCCEEEEe
Confidence 6543 122 456777666
No 55
>PLN02784 alpha-amylase
Probab=38.37 E-value=1.2e+02 Score=38.77 Aligned_cols=58 Identities=9% Similarity=0.295 Sum_probs=38.1
Q ss_pred HHHHHHHHhcccCCCCceEEEeeccc--c--CCC---cceeeCCCCCCC---hHHHHHHHHHcCCeEEEEE
Q 002442 379 EDVEQVDSKFDEHDIPYDVLWLDIEH--T--DGK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIV 439 (921)
Q Consensus 379 ~~v~~v~~~~~~~~IP~D~iwlDid~--~--~~~---~~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~ii 439 (921)
..+.+-++.+.+.|| ++|||---+ . .|+ .+|..|+ +|-. .+.|++.+|++|+++++=+
T Consensus 521 ~~I~ekldyL~~LG~--taIWLpP~~~s~s~~GY~p~D~y~lds-~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 521 MELGEKAAELSSLGF--TVVWLPPPTESVSPEGYMPKDLYNLNS-RYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred HHHHHHHHHHHHhCC--CEEEeCCCCCCCCCCCcCcccccccCc-CcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 356666777777776 899986421 1 122 2355553 6764 5689999999999987643
No 56
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=36.84 E-value=2.1e+02 Score=31.51 Aligned_cols=45 Identities=18% Similarity=0.426 Sum_probs=32.9
Q ss_pred eEEEeecccc----CCCcceeeC----CCCCCChHHHHHHHHHcCCeEEEEEc
Q 002442 396 DVLWLDIEHT----DGKKYFTWD----RLSFPHPEEMQRKLATKGRHMVTIVD 440 (921)
Q Consensus 396 D~iwlDid~~----~~~~~Ftwd----~~~FPdp~~m~~~L~~~G~k~v~iid 440 (921)
.++.+|+|-+ ...+.+.|. ...+|+-.++++.|+++|+++++...
T Consensus 159 ~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~ 211 (300)
T PHA02530 159 KAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSG 211 (300)
T ss_pred CEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeC
Confidence 5777888754 233445664 45688888999999999999887653
No 57
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=34.74 E-value=1.8e+02 Score=32.16 Aligned_cols=108 Identities=17% Similarity=0.208 Sum_probs=60.9
Q ss_pred CCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCCCCCCCChhhhHHHHHcCceeecCC--CCC
Q 002442 392 DIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDAT--KRD 469 (921)
Q Consensus 392 ~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~--g~~ 469 (921)
.-|.|.+.+|-.|.. +..=|-.++=++.+++.|+++|..++=+ ...+|..| -++....+.++ |.
T Consensus 41 ~~~f~llVVDps~~g--------~~~~~~~~eelr~~~~gg~~pIAYlsIg--~ae~yR~Y---wd~~w~~~~p~wLg~- 106 (300)
T COG2342 41 NSPFDLLVVDPSYCG--------PFNTPWTIEELRTKADGGVKPIAYLSIG--EAESYRFY---WDKYWLTGRPDWLGE- 106 (300)
T ss_pred cCCCcEEEEeccccC--------CCCCcCcHHHHHHHhcCCeeEEEEEech--hhhhhhhH---hhhhhhcCCcccccC-
Confidence 458899999865432 1112334566777888898888887643 33456554 23333333222 11
Q ss_pred eeeeeeCCccccccCCChhHHHHHhhhcccccccCCcCcceEeecCCCC
Q 002442 470 YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEP 518 (921)
Q Consensus 470 ~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEp 518 (921)
.-.-|||+ ..+-|=.|+=++-+.+.++.... .+++|+-+|-=++
T Consensus 107 -edP~W~Gn-y~VkYW~~eWkdii~~~l~rL~d---~GfdGvyLD~VD~ 150 (300)
T COG2342 107 -EDPEWPGN-YAVKYWEPEWKDIIRSYLDRLID---QGFDGVYLDVVDA 150 (300)
T ss_pred -CCCCCCCC-ceeeccCHHHHHHHHHHHHHHHH---ccCceEEEeeech
Confidence 11239996 34556667766666655543222 3577777776543
No 58
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=34.48 E-value=1e+02 Score=25.85 Aligned_cols=56 Identities=9% Similarity=0.243 Sum_probs=38.7
Q ss_pred HHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEE
Q 002442 380 DVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMV 436 (921)
Q Consensus 380 ~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v 436 (921)
.+.++.+-+.++++-++.+...-.-..+.....+.-+. .++++..+.|.++|++++
T Consensus 14 ~l~~i~~~l~~~~inI~~i~~~~~~~~~~~~v~i~v~~-~~~~~~~~~L~~~G~~v~ 69 (72)
T cd04883 14 QLADIAAIFKDRGVNIVSVLVYPSKEEDNKILVFRVQT-MNPRPIIEDLRRAGYEVL 69 (72)
T ss_pred HHHHHHHHHHHcCCCEEEEEEeccCCCCeEEEEEEEec-CCHHHHHHHHHHCCCeee
Confidence 56778888999999999887543222344444443333 566799999999998753
No 59
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=33.76 E-value=62 Score=40.37 Aligned_cols=91 Identities=16% Similarity=0.177 Sum_probs=56.9
Q ss_pred ChHHHHHHHHHcCCeEEEEE-cCCCCCC---CChhhhHHHHHcC-ceeecCCCCCeeeeeeCCccccccCCChhHHHHHh
Q 002442 420 HPEEMQRKLATKGRHMVTIV-DPHIKRD---DSYWLHNEATEKG-YYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWG 494 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~ii-dP~i~~~---~~y~~~~~~~~~~-~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~ 494 (921)
..+.||+.||+.|+.+|+=| =.|..-. ..-..+ +++..+ ||-.+++|.... |.|-+.-+.-.+|-+|+|--
T Consensus 266 EfK~mV~~lHkaGI~VILDVVfNHTae~~~~g~t~~f-~~id~~~Yyr~~~dg~~~N---~TGcGNtln~~hpmvrk~iv 341 (697)
T COG1523 266 EFKDMVKALHKAGIEVILDVVFNHTAEGNELGPTLSF-RGIDPNYYYRLDPDGYYSN---GTGCGNTLNTEHPMVRKLIV 341 (697)
T ss_pred HHHHHHHHHHHcCCEEEEEEeccCcccccCcCccccc-ccCCcCceEEECCCCCeec---CCccCcccccCChHHHHHHH
Confidence 45789999999999988733 2343210 000122 344555 666677765322 44555678888999999888
Q ss_pred hhcccccccCCcCcceEeecCC
Q 002442 495 TKFSYENYVGSTPSLYIWNDMN 516 (921)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~Dmn 516 (921)
+.+++ +.....+|||=.||.
T Consensus 342 DsLrY--Wv~e~hVDGFRFDLa 361 (697)
T COG1523 342 DSLRY--WVEEYHVDGFRFDLA 361 (697)
T ss_pred HHHHH--HHHHhCCCceeecch
Confidence 77664 233345677777765
No 60
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=33.38 E-value=1.3e+02 Score=37.74 Aligned_cols=71 Identities=20% Similarity=0.353 Sum_probs=50.3
Q ss_pred EEEEeCCCHHHHHHHHHHcc------CC---CCCCccccccccccccC--CC--CHHHHHHHHHhcccCCCCceEEEeec
Q 002442 336 TFFFVGPGPKDVVRQYTSVT------GM---PSMPPLFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWLDI 402 (921)
Q Consensus 336 ~y~f~G~~p~~v~~~Y~~lt------G~---p~lpP~walG~~qsrw~--Y~--~~~~v~~v~~~~~~~~IP~D~iwlDi 402 (921)
+|+-.|.+|-+++++=.+.. .+ ..-.|.|-=|+=.|.|+ |. +++.|++.++.+.+.|||.--+.+|.
T Consensus 156 l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDD 235 (747)
T PF05691_consen 156 LYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDD 235 (747)
T ss_pred EEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 45557889999888754432 11 12345454444459996 33 57789999999999999999999998
Q ss_pred cccC
Q 002442 403 EHTD 406 (921)
Q Consensus 403 d~~~ 406 (921)
.|++
T Consensus 236 GWQ~ 239 (747)
T PF05691_consen 236 GWQS 239 (747)
T ss_pred chhc
Confidence 8863
No 61
>PF09196 DUF1953: Domain of unknown function (DUF1953); InterPro: IPR015279 This domain is found in the Archaeal protein maltooligosyl trehalose synthase produced by Sulfolobus spp. Its function has not, as yet, been defined. ; PDB: 3HJE_A 1IV8_A.
Probab=32.96 E-value=94 Score=25.73 Aligned_cols=50 Identities=20% Similarity=0.290 Sum_probs=35.8
Q ss_pred eeeecCceeEeeeeccCceEEEEEcCCCceeeEeecceEEeCCeEEEEEeecCccce
Q 002442 717 AFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVKGGVTHKLEVSEESVPA 773 (921)
Q Consensus 717 qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~tg~~~~gg~~~~v~~pl~~iPv 773 (921)
-||-|+.+||. |-++|...++.-+-.++.+-|.-|++.+.+. +..+++|.
T Consensus 13 gf~r~~kilvi-iktkgs~n~~~~~e~~~~ytdv~t~e~i~~~------v~i~~lp~ 62 (66)
T PF09196_consen 13 GFIRFNKILVI-IKTKGSVNYKYKIEEGAIYTDVITGEEIKKE------VQINELPR 62 (66)
T ss_dssp EEEETTTEEEE-EES-TTSSCEEEEECCEEEEETTTTEEEECE------EEE-SS-E
T ss_pred eEEecCEEEEE-EecccccceeeeeccCcEEEeeecChheeee------Eeecccch
Confidence 59999999996 4455666777777767899999999888763 23466664
No 62
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=32.45 E-value=73 Score=39.93 Aligned_cols=92 Identities=16% Similarity=0.197 Sum_probs=50.7
Q ss_pred ChHHHHHHHHHcCCeEEEEEcC-CCCCCCCh---hhhHHHHH-cCceeecCCCC-CeeeeeeCCccccccCCChhHHHHH
Q 002442 420 HPEEMQRKLATKGRHMVTIVDP-HIKRDDSY---WLHNEATE-KGYYVKDATKR-DYDGWCWPGSSSYLDMLNPEIRTWW 493 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~iidP-~i~~~~~y---~~~~~~~~-~~~~vk~~~g~-~~~g~~WpG~~~~~Dftnp~a~~Ww 493 (921)
+.++||+.+|++|+++|+=+-+ |....... ..++ +.. ..||-.+.+.. .|. .|-|-..-+|+.+|.++++.
T Consensus 246 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~-~~d~~~yy~~~~~~~~~~~--~~~g~gn~ln~~~p~vr~~i 322 (688)
T TIGR02100 246 EFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFR-GIDNASYYRLQPDDKRYYI--NDTGTGNTLNLSHPRVLQMV 322 (688)
T ss_pred HHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCccccc-CCCCCcceEecCCCCceec--CCCCccccccCCCHHHHHHH
Confidence 4689999999999998875433 33221110 0111 111 23343333311 122 23333346899999999987
Q ss_pred hhhcccccccCCcCcceEeecCC
Q 002442 494 GTKFSYENYVGSTPSLYIWNDMN 516 (921)
Q Consensus 494 ~~~~~~~~~~g~~~~~~~W~Dmn 516 (921)
.+.+.+ +....++|||=+|.-
T Consensus 323 ~d~l~~--W~~e~gIDGfR~D~a 343 (688)
T TIGR02100 323 MDSLRY--WVTEMHVDGFRFDLA 343 (688)
T ss_pred HHHHHH--HHHHcCCcEEEEech
Confidence 776543 222345788777753
No 63
>PRK15447 putative protease; Provisional
Probab=28.79 E-value=2e+02 Score=32.18 Aligned_cols=107 Identities=14% Similarity=0.118 Sum_probs=61.1
Q ss_pred HHHHHHHHhcccCCCCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCCC-CCCCChhhhHHHHH
Q 002442 379 EDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHI-KRDDSYWLHNEATE 457 (921)
Q Consensus 379 ~~v~~v~~~~~~~~IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~i-~~~~~y~~~~~~~~ 457 (921)
..++.......+.| +|+|++..+....+..|+ ..+.++.++.+|+.|.++.+- -|.| ..+.......+..+
T Consensus 15 ~~~~~~~~~~~~~g--aDaVY~g~~~~~~R~~f~-----~~~l~e~v~~~~~~gkkvyva-~p~i~~~~~e~~~l~~~l~ 86 (301)
T PRK15447 15 ETVRDFYQRAADSP--VDIVYLGETVCSKRRELK-----VGDWLELAERLAAAGKEVVLS-TLALVEAPSELKELRRLVE 86 (301)
T ss_pred CCHHHHHHHHHcCC--CCEEEECCccCCCccCCC-----HHHHHHHHHHHHHcCCEEEEE-ecccccCHHHHHHHHHHHh
Confidence 34566666666666 899999854332222232 235678999999999997764 4565 33444444555555
Q ss_pred cCc---eeecCCCCC-eeeeeeCCcc----ccccCCChhHHHHHhhh
Q 002442 458 KGY---YVKDATKRD-YDGWCWPGSS----SYLDMLNPEIRTWWGTK 496 (921)
Q Consensus 458 ~~~---~vk~~~g~~-~~g~~WpG~~----~~~Dftnp~a~~Ww~~~ 496 (921)
.+. .|.|. |.. +... .|.. ..+.-+|..+.++|.+.
T Consensus 87 ~~~~~v~v~d~-g~l~~~~e--~~~~l~~d~~lni~N~~a~~~l~~~ 130 (301)
T PRK15447 87 NGEFLVEANDL-GAVRLLAE--RGLPFVAGPALNCYNAATLALLARL 130 (301)
T ss_pred cCCCEEEEeCH-HHHHHHHh--cCCCEEEecccccCCHHHHHHHHHc
Confidence 542 22221 110 0000 1221 23455899999999875
No 64
>PF03537 Glyco_hydro_114: Glycoside-hydrolase family GH114; InterPro: IPR004352 Eighty-one archaeal-like genes, ranging in size from 4-20kb, are clustered in 15 regions of the Thermotoga maritima genome []. Conservation of gene order between T. maritima and Archaea in many of these regions suggests that lateral gene transfer may have occurred between thermophilic Eubacteria and Archaea []. One of the T. maritima sequences (hypothetical protein TM1410) shares similarity with Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1477 and with hypothetical protein DR0705 from Deinococcus radiodurans. The sequences are characterised by relatively variable N- and C-terminal domains, and a more conserved central domain. They share no similarity with any other known, functionally or structurally characterised proteins. ; PDB: 2AAM_F.
Probab=27.45 E-value=94 Score=27.19 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=23.0
Q ss_pred CCceEEEeeccccCCCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCC
Q 002442 393 IPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPH 442 (921)
Q Consensus 393 IP~D~iwlDid~~~~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~ 442 (921)
-++|++.+|... .+++-|+.||++|.+++..++-+
T Consensus 25 ~~~~v~~iD~~~---------------~~~~~I~~L~~~G~~vicY~s~G 59 (74)
T PF03537_consen 25 PDVDVVVIDLFD---------------FSKEEIARLKAQGKKVICYFSIG 59 (74)
T ss_dssp SS-SEEEE-SBS-----------------HHHHHHHHHTT-EEEEEEESS
T ss_pred CCCCEEEECCcc---------------CCHHHHHHHHHCCCEEEEEEeCc
Confidence 566777666432 45789999999999999988643
No 65
>PF13591 MerR_2: MerR HTH family regulatory protein
Probab=26.98 E-value=97 Score=27.75 Aligned_cols=44 Identities=20% Similarity=0.298 Sum_probs=35.3
Q ss_pred CCHhHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhh
Q 002442 627 PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMF 679 (921)
Q Consensus 627 ~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~L 679 (921)
-+++.+.+|.+.|..-|.-.. .+ |.|+......++++.++|+-|
T Consensus 12 i~~~~l~~lve~Gli~p~~~~--------~~-~~f~~~~l~rl~~~~rL~~Dl 55 (84)
T PF13591_consen 12 IEPEFLRELVEEGLIEPEGEE--------EE-WYFSEEDLARLRRIRRLHRDL 55 (84)
T ss_pred cCHHHHHHHHHCCCeeecCCC--------Ce-eeECHHHHHHHHHHHHHHHHc
Confidence 468899999999999995322 23 558888888999999999865
No 66
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=26.72 E-value=60 Score=40.16 Aligned_cols=74 Identities=15% Similarity=0.325 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHcCCeEEE-EEcCCCCCCC--ChhhhHHHHH-cCceeecCCCCCeeeeeeCCccccccCCChhHHH----
Q 002442 420 HPEEMQRKLATKGRHMVT-IVDPHIKRDD--SYWLHNEATE-KGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRT---- 491 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~-iidP~i~~~~--~y~~~~~~~~-~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~---- 491 (921)
+.+.||+++|..|+-+++ +|.-|...++ ++..| ++.+ ..||-+++.|- -|-+.+...+..+|.++.
T Consensus 312 efK~lVd~aHs~GI~VlLDVV~sHaa~n~~d~l~~f-dGid~~~Yf~~~~r~~-----h~~~~~r~fn~~~~~V~rflL~ 385 (757)
T KOG0470|consen 312 EFKELVDKAHSLGIEVLLDVVHSHAAKNSKDGLNMF-DGIDNSVYFHSGPRGY-----HNSWCSRLFNYNHPVVLRFLLS 385 (757)
T ss_pred HHHHHHHHHhhCCcEEehhhhhhhcccCcCCcchhc-cCcCCceEEEeCCccc-----ccccccccccCCCHHHHHHHHH
Confidence 568999999999998776 4455554432 33343 3555 45555555322 233345688889998875
Q ss_pred ---HHhhhccc
Q 002442 492 ---WWGTKFSY 499 (921)
Q Consensus 492 ---Ww~~~~~~ 499 (921)
||-..++.
T Consensus 386 nLr~WVtEY~v 396 (757)
T KOG0470|consen 386 NLRWWVTEYHV 396 (757)
T ss_pred HHHHHHHheec
Confidence 77666543
No 67
>PRK06769 hypothetical protein; Validated
Probab=26.49 E-value=89 Score=31.70 Aligned_cols=47 Identities=15% Similarity=0.296 Sum_probs=33.8
Q ss_pred CceEEEeeccccC-CCcceee--CCCCCCChHHHHHHHHHcCCeEEEEEc
Q 002442 394 PYDVLWLDIEHTD-GKKYFTW--DRLSFPHPEEMQRKLATKGRHMVTIVD 440 (921)
Q Consensus 394 P~D~iwlDid~~~-~~~~Ftw--d~~~FPdp~~m~~~L~~~G~k~v~iid 440 (921)
|+-++.+|-|-+= +.+++.. +-..||+.+++++.|+++|+++.+..+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn 52 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTN 52 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEEC
Confidence 5678889987653 2222121 234689999999999999999988754
No 68
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=25.40 E-value=1.7e+02 Score=34.05 Aligned_cols=91 Identities=14% Similarity=0.276 Sum_probs=55.9
Q ss_pred HHHHHHHhcccCCCCceEEEeecccc--C--CCcceeeCCCCCCChHHHHHHHHHcCCeEEEEEcCC-----------CC
Q 002442 380 DVEQVDSKFDEHDIPYDVLWLDIEHT--D--GKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPH-----------IK 444 (921)
Q Consensus 380 ~v~~v~~~~~~~~IP~D~iwlDid~~--~--~~~~Ftwd~~~FPdp~~m~~~L~~~G~k~v~iidP~-----------i~ 444 (921)
.++.-++.+++.| +|+|-+|+=|- + +-+-|.|. .-+++++-+++.|.|+.+++.=| |.
T Consensus 17 ~~~~~L~~LK~~G--V~GVmvdvWWGiVE~~~p~~ydWs-----~Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~~Ip 89 (402)
T PF01373_consen 17 ALEAQLRALKSAG--VDGVMVDVWWGIVEGEGPQQYDWS-----GYRELFEMVRDAGLKLQVVMSFHQCGGNVGDDCNIP 89 (402)
T ss_dssp HHHHHHHHHHHTT--EEEEEEEEEHHHHTGSSTTB---H-----HHHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSSEB-
T ss_pred HHHHHHHHHHHcC--CcEEEEEeEeeeeccCCCCccCcH-----HHHHHHHHHHHcCCeEEEEEeeecCCCCCCCccCCc
Confidence 5666677777776 68888887652 2 22345554 35788999999999999998433 22
Q ss_pred CCCChhhhHHHHHcCceeecCCCCC---eeeeeeCCcc
Q 002442 445 RDDSYWLHNEATEKGYYVKDATKRD---YDGWCWPGSS 479 (921)
Q Consensus 445 ~~~~y~~~~~~~~~~~~vk~~~g~~---~~g~~WpG~~ 479 (921)
.. --+.+.+.+.++|.+|..|.. +...++.|.+
T Consensus 90 LP--~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~grt 125 (402)
T PF01373_consen 90 LP--SWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGRT 125 (402)
T ss_dssp S---HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTBC
T ss_pred CC--HHHHhccccCCcEEECCCCCcCcceeecccCCch
Confidence 21 136777888899999999983 4443444543
No 69
>PF07485 DUF1529: Domain of Unknown Function (DUF1259); InterPro: IPR011094 This family is the lppY/lpqO homologue family. They are related to 'probable conserved lipoproteins' LppY and LpqO from Mycobacterium bovis.
Probab=24.92 E-value=1.3e+02 Score=29.21 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=44.1
Q ss_pred CCCCccccccccccccCCC------------CHHHHHHHHHhcccCCCCceEEEeeccccCCC-cceeeCCCCCCChHHH
Q 002442 358 PSMPPLFSIAYHQCRWNYR------------DEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGK-KYFTWDRLSFPHPEEM 424 (921)
Q Consensus 358 p~lpP~walG~~qsrw~Y~------------~~~~v~~v~~~~~~~~IP~D~iwlDid~~~~~-~~Ftwd~~~FPdp~~m 424 (921)
-.++|.++++-|.+--... .++||..|++.++++||.+.+++.-+=+.+-. -|..|. .--||..|
T Consensus 35 ~~~~~~~~l~~~~aF~~~~~G~A~~~Gd~vll~~EV~pvi~aL~~~GI~vtAlHNH~l~e~Prl~ymH~~--~~gdp~~l 112 (123)
T PF07485_consen 35 RRLPPPMGLTSWIAFEPDGDGKAMVMGDFVLLEDEVNPVISALRKNGIEVTALHNHWLFEQPRLFYMHIW--GVGDPAKL 112 (123)
T ss_pred EEcCCccccceeEEEEECCCCcEEEeecEEecHHHHHHHHHHHHHCCceEEEEecccccCCCCEEEEEEE--ecCCHHHH
Confidence 3456656666555433332 27899999999999999999998542221111 122222 22378888
Q ss_pred HHHHHH
Q 002442 425 QRKLAT 430 (921)
Q Consensus 425 ~~~L~~ 430 (921)
.+.+++
T Consensus 113 A~~vr~ 118 (123)
T PF07485_consen 113 ARKVRA 118 (123)
T ss_pred HHHHHH
Confidence 887765
No 70
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=24.81 E-value=68 Score=40.45 Aligned_cols=108 Identities=17% Similarity=0.290 Sum_probs=55.6
Q ss_pred HHHHHhcccCCCCceEEEeec--ccc--C--C---CcceeeCCCCCCCh---HHHHHHHHHcCCeEEEEEcC-CCCCCC-
Q 002442 382 EQVDSKFDEHDIPYDVLWLDI--EHT--D--G---KKYFTWDRLSFPHP---EEMQRKLATKGRHMVTIVDP-HIKRDD- 447 (921)
Q Consensus 382 ~~v~~~~~~~~IP~D~iwlDi--d~~--~--~---~~~Ftwd~~~FPdp---~~m~~~L~~~G~k~v~iidP-~i~~~~- 447 (921)
.+++..+++.|+ ++|||=- ++. . | ..+|..++ +|.+| ++||+.+|++|+++++=+-| |...+.
T Consensus 254 ~~~L~ylk~LG~--t~I~LmPi~e~~~~~~wGY~~~~~fa~~~-~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~ 330 (758)
T PLN02447 254 DDVLPRIKALGY--NAVQLMAIQEHAYYGSFGYHVTNFFAVSS-RSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTL 330 (758)
T ss_pred HHHHHHHHHcCC--CEEEECCccccCCCCCCCcCcccCccccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccccccccc
Confidence 345566666565 5665531 111 1 1 12344443 56554 67999999999999885544 444321
Q ss_pred -ChhhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhcc
Q 002442 448 -SYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFS 498 (921)
Q Consensus 448 -~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~~ 498 (921)
+...|+ +....||-.+..|.. ..| | +..+|+.+++++++..+.++
T Consensus 331 ~gl~~fD-g~~~~Yf~~~~~g~~---~~w-~-~~~~N~~~~eVr~fLl~~~~ 376 (758)
T PLN02447 331 DGLNGFD-GTDGSYFHSGPRGYH---WLW-D-SRLFNYGNWEVLRFLLSNLR 376 (758)
T ss_pred ccccccC-CCCccccccCCCCCc---CcC-C-CceecCCCHHHHHHHHHHHH
Confidence 111121 111233332222211 224 2 34689999999886655443
No 71
>smart00642 Aamy Alpha-amylase domain.
Probab=24.60 E-value=1.8e+02 Score=29.55 Aligned_cols=62 Identities=16% Similarity=0.234 Sum_probs=36.8
Q ss_pred CHHHHHHHHHhcccCCCCceEEEeeccccC--------CC---cceeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcC
Q 002442 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHTD--------GK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP 441 (921)
Q Consensus 377 ~~~~v~~v~~~~~~~~IP~D~iwlDid~~~--------~~---~~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP 441 (921)
+-+.+.+-+..+++.|+ ++|||--=+.. ++ .++..|+ +|-+ .++|++.+|++|+++++=+-|
T Consensus 17 ~~~gi~~~l~yl~~lG~--~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~-~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 17 DLQGIIEKLDYLKDLGV--TAIWLSPIFESPQGYPSYHGYDISDYKQIDP-RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHCCC--CEEEECcceeCCCCCCCCCCcCccccCCCCc-ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 44556555566777664 88888532211 11 1123333 4443 467999999999998875443
No 72
>PLN03244 alpha-amylase; Provisional
Probab=23.00 E-value=1e+02 Score=38.98 Aligned_cols=81 Identities=10% Similarity=0.192 Sum_probs=43.8
Q ss_pred ceeeCCCCCCCh---HHHHHHHHHcCCeEEEEEcC-CCCCCCChhhhH-HHHHcCceeecCCCCCeeeeeeCCccccccC
Q 002442 410 YFTWDRLSFPHP---EEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHN-EATEKGYYVKDATKRDYDGWCWPGSSSYLDM 484 (921)
Q Consensus 410 ~Ftwd~~~FPdp---~~m~~~L~~~G~k~v~iidP-~i~~~~~y~~~~-~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Df 484 (921)
+|..++ +|-.| +.||+.+|++|++|++=+-| |...+....+.. ++...-||-.+..|. ...| |. ...|+
T Consensus 430 fFApss-RYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDGt~~~Yf~~~~~g~---~~~W-Gs-~~fny 503 (872)
T PLN03244 430 FFAASS-RYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDGSNDCYFHTGKRGH---HKHW-GT-RMFKY 503 (872)
T ss_pred ccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCCCccceeccCCCCc---cCCC-CC-ceecC
Confidence 344443 56555 57899999999999885444 454432111111 111112333222221 1245 43 56799
Q ss_pred CChhHHHHHhhh
Q 002442 485 LNPEIRTWWGTK 496 (921)
Q Consensus 485 tnp~a~~Ww~~~ 496 (921)
.+|+++++-.+.
T Consensus 504 g~~EVr~FLLsn 515 (872)
T PLN03244 504 GDLDVLHFLISN 515 (872)
T ss_pred CCHHHHHHHHHH
Confidence 999998754443
No 73
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=22.89 E-value=1.1e+02 Score=39.63 Aligned_cols=88 Identities=14% Similarity=0.072 Sum_probs=47.9
Q ss_pred ChHHHHHHHHHcCCeEEEEEc-CCCCCCCC--hhhhHHHHHcCceeec-CCCCCeeeeeeCCccccccCCChhHHHHHhh
Q 002442 420 HPEEMQRKLATKGRHMVTIVD-PHIKRDDS--YWLHNEATEKGYYVKD-ATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~iid-P~i~~~~~--y~~~~~~~~~~~~vk~-~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~ 495 (921)
+.++||+.||++|+++|+=+- -|...... -.+++. ...+||.+. .+|....+.||. -.+..||.++++..+
T Consensus 405 Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~-~~P~YY~r~~~~G~~~n~~~~~----d~a~e~~~Vrk~iiD 479 (898)
T TIGR02103 405 EFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDK-IVPGYYHRLNEDGGVENSTCCS----NTATEHRMMAKLIVD 479 (898)
T ss_pred HHHHHHHHHHHCCCEEEEEeecccccccCccCcccccc-cCcHhhEeeCCCCCeecCCCCc----CCCCCCHHHHHHHHH
Confidence 467899999999999887432 33332110 012221 123566653 344432333442 236788988887666
Q ss_pred hcccccccCCcCcceEeec
Q 002442 496 KFSYENYVGSTPSLYIWND 514 (921)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~D 514 (921)
.+.+ +....++|||=+|
T Consensus 480 sl~~--W~~ey~VDGFRfD 496 (898)
T TIGR02103 480 SLVV--WAKDYKVDGFRFD 496 (898)
T ss_pred HHHH--HHHHcCCCEEEEe
Confidence 5542 1112356777666
No 74
>PLN02960 alpha-amylase
Probab=22.45 E-value=1.2e+02 Score=38.96 Aligned_cols=112 Identities=13% Similarity=0.240 Sum_probs=59.5
Q ss_pred CHHHHH-HHHHhcccCCCCceEEEee-c-ccc----CC---CcceeeCCCCCCCh---HHHHHHHHHcCCeEEEEEc-CC
Q 002442 377 DEEDVE-QVDSKFDEHDIPYDVLWLD-I-EHT----DG---KKYFTWDRLSFPHP---EEMQRKLATKGRHMVTIVD-PH 442 (921)
Q Consensus 377 ~~~~v~-~v~~~~~~~~IP~D~iwlD-i-d~~----~~---~~~Ftwd~~~FPdp---~~m~~~L~~~G~k~v~iid-P~ 442 (921)
+-.++. +++..+++.|| ++|||= + ++. -| ..+|..++ +|-.| +.||+.+|++|+++|+=+- -|
T Consensus 414 tf~~~~e~~LdYLk~LGv--t~IeLmPv~e~~~~~swGY~~~~yfa~~~-~yGtp~dfk~LVd~aH~~GI~VILDvV~NH 490 (897)
T PLN02960 414 SFKEFTQKVLPHVKKAGY--NAIQLIGVQEHKDYSSVGYKVTNFFAVSS-RFGTPDDFKRLVDEAHGLGLLVFLDIVHSY 490 (897)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 334443 56777887777 677763 1 111 11 12344443 55554 5789999999999988544 35
Q ss_pred CCCCCCh--hhhHHHHHcCceeecCCCCCeeeeeeCCccccccCCChhHHHHHhhhc
Q 002442 443 IKRDDSY--WLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKF 497 (921)
Q Consensus 443 i~~~~~y--~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~ 497 (921)
...+... ..|+ +....||-.+..|. ...| | +..+||.+|+++++..+.+
T Consensus 491 ~~~d~~~~L~~FD-G~~~~Yf~~~~~g~---~~~W-G-~~~fNy~~~eVr~fLlsna 541 (897)
T PLN02960 491 AAADEMVGLSLFD-GSNDCYFHSGKRGH---HKRW-G-TRMFKYGDHEVLHFLLSNL 541 (897)
T ss_pred cCCccccchhhcC-CCccceeecCCCCc---cCCC-C-CcccCCCCHHHHHHHHHHH
Confidence 5444211 1121 11111332222221 1235 3 3468999999998655443
No 75
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=22.40 E-value=4.1e+02 Score=31.22 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=67.8
Q ss_pred CHHHHHHHHHhcccCCCCceEEEeecccc---CCCc-----ceeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcC-CCC
Q 002442 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHT---DGKK-----YFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIK 444 (921)
Q Consensus 377 ~~~~v~~v~~~~~~~~IP~D~iwlDid~~---~~~~-----~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP-~i~ 444 (921)
+-.-+.+-++-+++.|| |+||+---+. ...+ +...|+ .|.. .+++++.+|++|+|+++=+-. |..
T Consensus 27 dl~Gi~~~LdYl~~LGv--~aiwl~Pi~~s~~~~~gY~~~Dy~~id~-~~Gt~~d~~~li~~~H~~gi~vi~D~V~NH~s 103 (505)
T COG0366 27 DLKGITEKLDYLKELGV--DAIWLSPIFESPQADHGYDVSDYTKVDP-HFGTEEDFKELVEEAHKRGIKVILDLVFNHTS 103 (505)
T ss_pred cHHhHHHhhhHHHHhCC--CEEEeCCCCCCCccCCCccccchhhcCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccCcCC
Confidence 44445555566666665 9999863221 1111 233444 5654 467899999999998875432 222
Q ss_pred CCCChhhhHHHHHc-------CceeecC-------CC---CCeeeeeeC----C--------ccc-cccCCChhHHHHHh
Q 002442 445 RDDSYWLHNEATEK-------GYYVKDA-------TK---RDYDGWCWP----G--------SSS-YLDMLNPEIRTWWG 494 (921)
Q Consensus 445 ~~~~y~~~~~~~~~-------~~~vk~~-------~g---~~~~g~~Wp----G--------~~~-~~Dftnp~a~~Ww~ 494 (921)
. ....+.++... ++|+-.. .. ..+.+.-|. + ... -+++.||+++++..
T Consensus 104 ~--~~~~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~ 181 (505)
T COG0366 104 D--EHPWFKEARSSKPNPKRSDYYIWRDPDPDGTPPNNWFSVFGGDAWTWGNTGEYYLHLFSSEQPDLNWENPEVREELL 181 (505)
T ss_pred C--ccHHHHHHhcCCCCcccCCCceEccCcccCCCCCcchhhcCCCCCCcCCCCceEEEecCCCCCCcCCCCHHHHHHHH
Confidence 2 22445554421 4555210 00 012222231 1 112 27889999999988
Q ss_pred hhcccccccCCcCcceEeec
Q 002442 495 TKFSYENYVGSTPSLYIWND 514 (921)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~D 514 (921)
+.+++... .++|||=+|
T Consensus 182 ~~~~~W~~---~gvDGfRlD 198 (505)
T COG0366 182 DVVKFWLD---KGVDGFRLD 198 (505)
T ss_pred HHHHHHHH---cCCCeEEec
Confidence 75543222 345665555
No 76
>PRK14706 glycogen branching enzyme; Provisional
Probab=21.61 E-value=84 Score=39.04 Aligned_cols=24 Identities=17% Similarity=0.111 Sum_probs=18.4
Q ss_pred hHHHHHHHHHcCCeEEEEEcC-CCC
Q 002442 421 PEEMQRKLATKGRHMVTIVDP-HIK 444 (921)
Q Consensus 421 p~~m~~~L~~~G~k~v~iidP-~i~ 444 (921)
.+.||+.+|++|+++++=+-| |..
T Consensus 219 ~~~lv~~~H~~gi~VilD~v~nH~~ 243 (639)
T PRK14706 219 FKYLVNHLHGLGIGVILDWVPGHFP 243 (639)
T ss_pred HHHHHHHHHHCCCEEEEEecccccC
Confidence 468999999999998875544 443
No 77
>PRK12313 glycogen branching enzyme; Provisional
Probab=21.60 E-value=1.2e+02 Score=37.51 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=45.5
Q ss_pred hHHHHHHHHHcCCeEEEEEcC-CCCCCCCh-hhhHHHHHcCce-eecCCCCCeeeeeeCCccccccCCChhHHHHHhhhc
Q 002442 421 PEEMQRKLATKGRHMVTIVDP-HIKRDDSY-WLHNEATEKGYY-VKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKF 497 (921)
Q Consensus 421 p~~m~~~L~~~G~k~v~iidP-~i~~~~~y-~~~~~~~~~~~~-vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~Ww~~~~ 497 (921)
.++||+.+|++|+++|+=+-| |...+... ..|+ ...+| ..++.. .+. ..|. +.-+|+.||++++...+.+
T Consensus 222 ~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~~~~---~~~~~~~~~~~~-~~~-~~w~--~~~~n~~~~~vr~~l~~~~ 294 (633)
T PRK12313 222 FMYLVDALHQNGIGVILDWVPGHFPKDDDGLAYFD---GTPLYEYQDPRR-AEN-PDWG--ALNFDLGKNEVRSFLISSA 294 (633)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCcccccccC---CCcceeecCCCC-CcC-CCCC--CcccCCCCHHHHHHHHHHH
Confidence 468999999999998885544 44333210 0010 00011 111110 010 1232 2357899999998776654
Q ss_pred ccccccCCcCcceEeecCC
Q 002442 498 SYENYVGSTPSLYIWNDMN 516 (921)
Q Consensus 498 ~~~~~~g~~~~~~~W~Dmn 516 (921)
.+ +....++|||=+|+-
T Consensus 295 ~~--W~~~~~iDG~R~D~~ 311 (633)
T PRK12313 295 LF--WLDEYHLDGLRVDAV 311 (633)
T ss_pred HH--HHHHhCCcEEEEcCh
Confidence 42 122235677777753
No 78
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism]
Probab=21.36 E-value=1.7e+02 Score=35.75 Aligned_cols=124 Identities=13% Similarity=0.163 Sum_probs=65.6
Q ss_pred CCCCceEEEeeccc-------cCCCcceeeCCCCCCC---hHHHHHHHHHcCCeEEEEEcCCCCCCC-Ch---hhhHHHH
Q 002442 391 HDIPYDVLWLDIEH-------TDGKKYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDPHIKRDD-SY---WLHNEAT 456 (921)
Q Consensus 391 ~~IP~D~iwlDid~-------~~~~~~Ftwd~~~FPd---p~~m~~~L~~~G~k~v~iidP~i~~~~-~y---~~~~~~~ 456 (921)
.++.++++|+---+ ...-.++++=..+|.. .+++++.+|+.|+++|+-+=|.-..+. .+ ....+..
T Consensus 50 ~~lG~taiWisP~~~s~~~~~GY~~~d~~~l~p~fGt~edf~~Li~~~h~~gi~ii~D~viNh~~~~~~wf~~~~~~~~~ 129 (545)
T KOG0471|consen 50 KELGFTAIWLSPFTKSSKPDFGYDASDLEQLRPRFGTEEDFKELILAMHKLGIKIIADLVINHRSDEVEWFKASPTSKTG 129 (545)
T ss_pred HhcCCceEEeCCCcCCCHHHhccCccchhhhcccccHHHHHHHHHHHHhhcceEEEEeeccccCCccccccccCcccccc
Confidence 46778999986432 2223344443357775 467899999999998876543222110 00 0011111
Q ss_pred HcCceeecCCC-----C---------CeeeeeeCC----------c----cccccCCChhHHHHHhhhcccccccCCcCc
Q 002442 457 EKGYYVKDATK-----R---------DYDGWCWPG----------S----SSYLDMLNPEIRTWWGTKFSYENYVGSTPS 508 (921)
Q Consensus 457 ~~~~~vk~~~g-----~---------~~~g~~WpG----------~----~~~~Dftnp~a~~Ww~~~~~~~~~~g~~~~ 508 (921)
-.+++.-...+ + .+.+..||. . ..=+|+.||++++-+.+.++. +.-..++
T Consensus 130 y~d~~~~~~~~~~~~g~~~~p~nw~~~~~~s~~~~~e~~~~~~l~~~~~~~pDln~~n~~V~~~~~~~l~~--~~~~~gv 207 (545)
T KOG0471|consen 130 YEDWYPWHDGSSLDVGKRIPPLNWLSVFGGSAWPFDEGRQKYYLGQFAVLQPDLNYENPDVRKAIKEWLRD--FWLEKGV 207 (545)
T ss_pred ceeeeeccCcccccccCCCCccchHhhhccccCcccccccceeccchhhcCCCCCCCCHHHHHHHHHHHHH--HHhhcCC
Confidence 22233332211 1 123444552 1 234788999999998887751 1112346
Q ss_pred ceEeecCC
Q 002442 509 LYIWNDMN 516 (921)
Q Consensus 509 ~~~W~Dmn 516 (921)
+|+=+|+-
T Consensus 208 dGfRiD~v 215 (545)
T KOG0471|consen 208 DGFRIDAV 215 (545)
T ss_pred CeEEEEcc
Confidence 66666765
No 79
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=21.35 E-value=1.3e+02 Score=32.86 Aligned_cols=92 Identities=12% Similarity=0.217 Sum_probs=61.6
Q ss_pred HHHHHHHHHHccCCCCCCccccccccccccCCCCHHHHHHHHHhcccC-------CCCceEEEeeccccCCCcceeeCCC
Q 002442 344 PKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEH-------DIPYDVLWLDIEHTDGKKYFTWDRL 416 (921)
Q Consensus 344 p~~v~~~Y~~ltG~p~lpP~walG~~qsrw~Y~~~~~v~~v~~~~~~~-------~IP~D~iwlDid~~~~~~~Ftwd~~ 416 (921)
..+.+++..+.-| .=.|||=.+.++-++.++|++-++++..- ++.+|.|++|-=-. + ..
T Consensus 55 Y~~~i~~L~~~~n------v~vlGYV~T~Yg~R~~~~V~~dI~~Y~~W~~~~~~~~~~vdGIFfDE~p~-~-------~~ 120 (253)
T PF12138_consen 55 YAAAIPRLNSYAN------VRVLGYVHTSYGSRPLSEVKADIDTYASWYGQSEDYGYRVDGIFFDEAPN-D-------YA 120 (253)
T ss_pred HHHHHHHHHhcCC------CcEEEEEEccccCCCHHHHHHHHHHHhhccccccCCCcccceEEEecCCC-c-------HH
Confidence 4455555544334 44689999999999999999988888776 69999999993111 1 12
Q ss_pred CCCChHHHHHHHHH---cCCeEEEEEcCCCCC-CCCh
Q 002442 417 SFPHPEEMQRKLAT---KGRHMVTIVDPHIKR-DDSY 449 (921)
Q Consensus 417 ~FPdp~~m~~~L~~---~G~k~v~iidP~i~~-~~~y 449 (921)
..+-.+.+.+.+++ .+..-.++.+|+... +..|
T Consensus 121 ~~~y~~~l~~~vk~~~~~~~~~~VV~NPGt~~p~~~y 157 (253)
T PF12138_consen 121 NLPYYQNLYNYVKSAFGLGGDGLVVLNPGTAVPDPGY 157 (253)
T ss_pred HHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCcchh
Confidence 23334555666666 556667778999854 3544
No 80
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=20.93 E-value=1.4e+02 Score=30.07 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=33.0
Q ss_pred CCceEEEeeccccCCCcceeeCC-CCCCChHHHHHHHHHcCCeEEEEEc
Q 002442 393 IPYDVLWLDIEHTDGKKYFTWDR-LSFPHPEEMQRKLATKGRHMVTIVD 440 (921)
Q Consensus 393 IP~D~iwlDid~~~~~~~Ftwd~-~~FPdp~~m~~~L~~~G~k~v~iid 440 (921)
..++.+.+|.|.+- ..++. .-||+..++++.|+++|++++++.+
T Consensus 23 ~~v~~vv~D~Dgtl----~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn 67 (170)
T TIGR01668 23 VGIKGVVLDKDNTL----VYPDHNEAYPALRDWIEELKAAGRKLLIVSN 67 (170)
T ss_pred CCCCEEEEecCCcc----ccCCCCCcChhHHHHHHHHHHcCCEEEEEeC
Confidence 35688999987541 22233 5689999999999999999888765
No 81
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=20.32 E-value=1e+02 Score=37.54 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=46.2
Q ss_pred ChHHHHHHHHHcCCeEEEEEcC-CCCCCCChh-hhHHHHHcCceeecCCCCCeeeeeeCCccccccCCCh---hHHHHHh
Q 002442 420 HPEEMQRKLATKGRHMVTIVDP-HIKRDDSYW-LHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNP---EIRTWWG 494 (921)
Q Consensus 420 dp~~m~~~L~~~G~k~v~iidP-~i~~~~~y~-~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp---~a~~Ww~ 494 (921)
+.++|++.+|++|+++|+=+-+ |...+..|. .| ..||-.+. ...| |. -+|+.+| +++++..
T Consensus 161 e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~-----~~y~~~~~------~~~w-g~--~~n~~~~~~~~vr~~i~ 226 (542)
T TIGR02402 161 DLKALVDAAHGLGLGVILDVVYNHFGPEGNYLPRY-----APYFTDRY------STPW-GA--AINFDGPGSDEVRRYIL 226 (542)
T ss_pred HHHHHHHHHHHCCCEEEEEEccCCCCCcccccccc-----CccccCCC------CCCC-CC--ccccCCCcHHHHHHHHH
Confidence 3578999999999998875443 443333221 11 11332111 1223 33 3799999 9988877
Q ss_pred hhcccccccCCcCcceEeecC
Q 002442 495 TKFSYENYVGSTPSLYIWNDM 515 (921)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~Dm 515 (921)
+.+.+ +....++|||=+|.
T Consensus 227 ~~~~~--W~~e~~iDGfR~D~ 245 (542)
T TIGR02402 227 DNALY--WLREYHFDGLRLDA 245 (542)
T ss_pred HHHHH--HHHHhCCcEEEEeC
Confidence 76542 22224577776764
Done!