Query         002442
Match_columns 921
No_of_seqs    374 out of 2058
Neff          6.9 
Searched_HMMs 29240
Date          Tue Mar 26 16:10:18 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002442.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1168-1172//hhsearch_pdb/002442hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3l4y_A Maltase-glucoamylase, i   1.0       1       1 1552.7  81.0  800   34-920    23-868 (875)
  2 3lpp_A Sucrase-isomaltase; gly   1.0       1       1 1549.6  79.7  798   34-920    52-898 (898)
  3 3top_A Maltase-glucoamylase, i   1.0       1       1 1527.2  75.4  791   34-913    24-893 (908)
  4 4ba0_A Alpha-glucosidase, puta   1.0       1       1 1352.5  77.5  755   59-920    39-815 (817)
  5 3nsx_A Alpha-glucosidase; stru   1.0       1       1 1316.2  55.0  580  215-833    40-664 (666)
  6 2x2h_A Alpha-1,4-glucan lyase    1.0       1       1 1246.2  62.4  791   85-920    64-1026(1027)
  7 2xvl_A Alpha-xylosidase, putat   1.0       1       1 1237.1  70.5  736   59-871    47-960 (1020)
  8 2g3m_A Maltase, alpha-glucosid   1.0       1       1 1234.9  56.3  602  215-905    51-680 (693)
  9 2f2h_A Putative family 31 gluc   1.0       1       1 1227.9  71.1  710   43-846     7-727 (773)
 10 1zy9_A Alpha-galactosidase; TM   1.0       1       1  224.6  13.1  273  279-599   117-408 (564)

No 1  
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=1.00  E-value=1  Score=1552.66  Aligned_cols=800  Identities=26%  Similarity=0.493  Sum_probs=708.2

Q ss_pred             CCCCCCCCCCCCCCCCCC-------CCCEEEECEEEECCCCCEEEEEECC--CCCCCCCCCEEEEEEEEEECCEEEEEEE
Q ss_conf             434588320012458999-------9852873116884798299998118--8899998640899999997778999992
Q 002442           34 FRNCNQTPFCKRARSRNP-------FSCSLIANQVTISDDGDISAKLVPK--NHDDHHQINPLILSLSIYQDGIVRLKID  104 (921)
Q Consensus        34 fktC~qs~FC~R~R~~~~-------~~y~~~~~sv~~~~~~~~~a~l~~~--~~~~~~~~~~L~l~i~~~~~~~~Rv~I~  104 (921)
                      -..|.++||||.......       ..++|.+.++...++.+++|.|...  ++.||.++..|.|+|++++++++||||.
T Consensus        23 ~~~C~~rgCcw~~~~~~~vP~C~~p~~~gy~~~~~~~~~~~g~~a~l~~~~~~~~~g~di~~l~l~v~~~~~~~l~~~i~  102 (875)
T 3l4y_A           23 KATCDQRGCCWNPQGAVSVPWCYYSKNHSYHVEGNLVNTNAGFTARLKNLPSSPVFGSNVDNVLLTAEYQTSNRFHFKLT  102 (875)
T ss_dssp             HHHHHHHTCEECTTSSTTCCSEECCTTSSEEEEEEEEECSSEEEEEEEECCCCCSSSCBCSEEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEEC
T ss_conf             88996688882168888998334789999688663542788689999767888777666310599999965976887865


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEECCCEEEEEECCC
Q ss_conf             29999999984102655467743332111025554346889871685078779999946849999994699189996458
Q 002442          105 EDPTLNPRKQRFQVPDVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLNSN  184 (921)
Q Consensus       105 e~~~~~~~~~Ry~vp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~i~~~~~g~~v~~~n~~  184 (921)
                      |     ++++||+||..+++++...      .              .....++++++.+||.|+|.|+++|++++.. +.
T Consensus       103 d-----~~~~r~~vp~~~~~~~~~~------~--------------~~~~~~~~~~~~~pf~~~v~r~~~~~vlfdt-~~  156 (875)
T 3l4y_A          103 D-----QTNNRFEVPHEHVQSFSGN------A--------------AASLTYQVEISRQPFSIKVTRRSNNRVLFDS-SI  156 (875)
T ss_dssp             E-----TTBCCCCCCCSSCCCCCSC------C--------------CSSCSEEEEEEETTEEEEEEETTTCCEEEEG-GG
T ss_pred             C-----CCCCEEECCCCCCCCCCCC------C--------------CCCCCEEEEEECCCEEEEEEECCCCEEEEEC-CC
T ss_conf             8-----8888078884357889888------7--------------7787359999579837999987898187860-46


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf             87211134456202110124347899998406999975699835627998898888999899987895115411365665
Q 002442          185 GLFDFEEKNEGEEWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEY  264 (921)
Q Consensus       185 ~l~~~e~~~~~~~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~y  264 (921)
                      +.|.|+         +||.             .+...+| ++++||||||.+.+.++++      ++++++|||+|++. 
T Consensus       157 ~~l~f~---------dq~l-------------~~~t~lp-~~~~yGlGE~~~~~~~~~~------~~~~~~~~n~D~~~-  206 (875)
T 3l4y_A          157 GPLLFA---------DQFL-------------QLSTRLP-STNVYGLGEHVHQQYRHDM------NWKTWPIFNRDTTP-  206 (875)
T ss_dssp             SCCEEE---------TTEE-------------EEEEECS-CSCEEEEESSCCSSSSBCC------SSEEEEECCCCCCC-
T ss_pred             CCEEEE---------CCEE-------------EEEEECC-CCCEECCCCCCCCCCCCCC------CCCEEEEEECCCCC-
T ss_conf             755886---------2489-------------9999879-7643424666675540157------98588878547899-


Q ss_pred             CCCCCCCCCCCEEEEEEECC-CCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCC
Q ss_conf             79999887552218998478-98638999934862499982788776655446776663214997204728999994799
Q 002442          265 LHDSPFGLYGSIPFMISHGK-SGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPG  343 (921)
Q Consensus       265 ~~~~~~~lYg~iPf~~~~~~-~~~~~Gvf~~n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~  343 (921)
                       ....++|||+||||++++. ++.+|||||+|+++++|++..                ...++|+++||.||+|||.||+
T Consensus       207 -~~~~~~lY~~~Pf~~~~~~~~~~~~Gvf~~Ns~~~~v~~~~----------------~~~~~~~~~gg~lD~y~~~Gpt  269 (875)
T 3l4y_A          207 -NGNGTNLYGAQTFFLCLEDASGLSFGVFLMNSNAMEVVLQP----------------APAITYRTIGGILDFYVFLGNT  269 (875)
T ss_dssp             -STTCCCCSCCEEEEEEECSTTCCEEEEEECCCSCEEEEEET----------------TTEEEEEESSSCEEEEEEEESS
T ss_pred             -CCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCC----------------CCEEEEEECCCCEEEEEEECCC
T ss_conf             -87777765511079998658996799999779863897368----------------9629999778848999980898


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHH
Q ss_conf             78999999870299999942122431234688998899999985001899933999521236998311357999999589
Q 002442          344 PKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEE  423 (921)
Q Consensus       344 p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~~Ftwd~~~FPd~~~  423 (921)
                      |++|+++|++|||+|+|||+||||||||||+|.++++|++|+++|++++||||++|+||+||+++++||||+++||||++
T Consensus       270 p~~Vv~~Y~~ltG~p~lpP~WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp~~  349 (875)
T 3l4y_A          270 PEQVVQEYLELIGRPALPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKGFPE  349 (875)
T ss_dssp             HHHHHHHHHHHHCCCCCCCGGGGSEEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSBTTBTTCCCTTTTTTHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHCCCCCEEECHHHCCCHHH
T ss_conf             99999999998588887971012651333578999999999999886299986389766010577740038545889899


Q ss_pred             HHHHHHHCCCEEEEEECCCCCCCC----CHHHHHHHHHCCCEEECCCCCC-EEEEEECCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             999999759928999838888899----8155699887683366699998-02322089631124888668999964101
Q 002442          424 MQRKLATKGRHMVTIVDPHIKRDD----SYWLHNEATEKGYYVKDATKRD-YDGWCWPGSSSYLDMLNPEIRTWWGTKFS  498 (921)
Q Consensus       424 m~~~L~~~g~k~v~iidP~i~~~~----~y~~~~~~~~~~~~vk~~~g~~-~~g~~WpG~~~~~Df~np~a~~Ww~~~~~  498 (921)
                      |+++||++|+|+++|+||+|+.++    +|++|+++.++|+|||+++|.. +.|.||||.++||||+||++++||.++++
T Consensus       350 mv~~Lh~~G~k~v~~idP~I~~~s~~~~~y~~y~eg~~~g~fvk~~dG~~~~~g~~WpG~~~~pDFtnP~a~~WW~~~~k  429 (875)
T 3l4y_A          350 FVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTKEFE  429 (875)
T ss_dssp             HHHHHHHTTCEEEEEECSCEECCCCSSSCCHHHHHHHHHTCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             99999977998999967861457666656688999987992898889983248874589755729999899999999999


Q ss_pred             CCCCCCCCCCCEEEECCCCCCCCCCC-------------------------CCCCCCCCCCCCCCCCHHHCHHHHHHHHH
Q ss_conf             23334876841386058999846899-------------------------63368876557862100000012457898
Q 002442          499 YENYVGSTPSLYIWNDMNEPSVFNGP-------------------------EVTMPRDALHLDRVEHRELHNAYGYYFHM  553 (921)
Q Consensus       499 ~~~~~g~~~~~~~W~DmnEps~f~g~-------------------------e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~  553 (921)
                      .  +....+++|+|+|||||++|+..                         ..|+++|+.|+.| +|+++||+||+++++
T Consensus       430 ~--~~~~~gidg~W~DmnEp~~f~~g~~~~c~~~~l~~ppy~p~~~d~~l~~~t~~~d~~~~~g-~h~~~HNlYg~~~~~  506 (875)
T 3l4y_A          430 L--FHNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNNPPFTPRILDGYLFCKTLCMDAVQHWG-KQYDIHNLYGYSMAV  506 (875)
T ss_dssp             H--HHTTSCCSEEEECSTTTCCSSSBSTTCCCCSTTTSCSCCCSCGGGCTTTTSBCTTCEETTE-EHHHHGGGHHHHHHH
T ss_pred             H--HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC-CCHHHHHHHHHHHHH
T ss_conf             9--8740687689972898532577753457644345888654324442126754565011377-402344474899999


Q ss_pred             HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             74999986108999983886024479876450115887254467776499999871269984135778999999876899
Q 002442          554 ATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLV  633 (921)
Q Consensus       554 at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~l~~~l~Gip~~G~DigGF~g~~~~EL~~  633 (921)
                      |++++++++.+ ++|||+||||+|+|+|||+++|+|||.++|++|+.+|+++|++||+|+||||+|||||+|++++|||+
T Consensus       507 at~e~l~~~~~-~kRpfilsRS~~aGsqry~~~WsGDn~s~W~~L~~sI~~~L~~~lsG~p~~g~DIGGF~g~~~~EL~~  585 (875)
T 3l4y_A          507 ATAEAAKTVFP-NKRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCR  585 (875)
T ss_dssp             HHHHHHHHHST-TBCCCEEESSCCTTGGGTCEEECCSCBSSHHHHHHHHHHHHHHHHTTCCSEECEETCSBSCCCHHHHH
T ss_pred             HHHHHHHHHCC-CCCEEEEECCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHH
T ss_conf             99999998447-98608995553377776564318850048889999899999988619884257747768999789999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             9861253232122248899999874003825--79999999999993369999999999976996324554469999432
Q 002442          634 RWYQLGAYYPFFRAHAHHDTKRREPWLFGER--NTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDEST  711 (921)
Q Consensus       634 RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~--~~~~~r~~i~lRY~LlPY~Ytl~~~a~~~G~Pi~RPL~~~fP~D~~~  711 (921)
                      ||+|+|||+||||+|++.++++||||.|+++  +.+++|++|++||+|||||||++++||.+|.|||||||++||+|+++
T Consensus       586 RW~Q~GaF~P~~R~H~~~~~~~~EPw~fg~~~~v~~~~r~~i~lRY~LlPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~  665 (875)
T 3l4y_A          586 RWMQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSSRHYLNIRYTLLPYLYTLFFRAHSRGDTVARPLLHEFYEDNST  665 (875)
T ss_dssp             HHHHHHTTSSSEEECCCTTSCCCSGGGGCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCCCSEECHHHHHTTCGGG
T ss_pred             HHHHHHHCCCEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHH
T ss_conf             99997405862661479998887970069856899999999999999899999999999974985244531589898667


Q ss_pred             CCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEE-CCEEEEEEEECCCCCEECCCCEEEECCCCCCCC
Q ss_conf             2458525324952596455168638999838984126741024984-896999975348612340699265045787875
Q 002442          712 FTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVK-GGVTHKLEVSEESVPAFQRPGTIIPRRDRFRRS  790 (921)
Q Consensus       712 ~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~tg~~~~-gg~~~~v~apl~~iPvfvR~GsIiP~~~~~~~s  790 (921)
                      +++++|||+|++||||||+++|+++|+|||| +|.|||+|||+.+. +|+++++++||++||||||+|+|||+++ ++++
T Consensus       666 ~~i~dQfm~G~~LLVAPV~~~g~~~~~vYLP-~g~Wyd~~tg~~~~~~g~~~~~~apld~iPvfvR~GsIiP~~~-~~~~  743 (875)
T 3l4y_A          666 WDVHQQFLWGPGLLITPVLDEGAEKVMAYVP-DAVWYDYETGSQVRWRKQKVEMELPGDKIGLHLRGGYIFPTQQ-PNTT  743 (875)
T ss_dssp             TTCCSCEEETTTEEEECCCSTTCSEEEEEEC-SSCEEETTTCCBCSCCSEEEEEECCTTCCEEEEETTEEEEEEC-CCSS
T ss_pred             HCCCCEEEECCCCEEEEECCCCCCEEEEECC-CCCEECCCCCEEEECCCEEEEEECCCCCCEEEEECCEEEECCC-CCCC
T ss_conf             4478608855870894311489715999939-9860578999699639989999636742218965884710367-5542


Q ss_pred             CCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCC-CCCCEEEEEEEEEECCEEEEEEECCCCCCCCCC--CCEEEEEEEE
Q ss_conf             1001479718999807995449999984898932-379809999999998947899713787877778--7406979999
Q 002442          791 STQMVNDPYTLVVALNSSQAAEGQLYVDDGKSFD-FLEGAFIHRRFVFSNGQLKSINMAPAAGKSRFS--SECIIERIIL  867 (921)
Q Consensus       791 t~~~~~~p~~L~v~~~~~~~a~g~ly~DDG~s~~-y~~g~~~~~~f~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~i~i  867 (921)
                      +.+++.+|++|+|+++.++.|+|+||+|||+|++ |++|+|..++|+++++.|++...     .+.|.  ....+++|+|
T Consensus       744 t~~~~~~~~~l~v~~~~~g~a~g~LY~DDG~s~~~~~~g~y~~~~f~~~~~~l~~~~~-----~~~y~~~~~~~~~~i~i  818 (875)
T 3l4y_A          744 TLASRKNPLGLIIALDENKEAKGELFWDDGETKDTVANKVYLLCEFSVTQNRLEVNIS-----QSTYKDPNNLAFNEIKI  818 (875)
T ss_dssp             HHHHTTSCEEEEEECCTTSCEEEEEEECCSSBTTTTTTTCCEEEEEEECSSEEEEEEE-----EECCCCTTCCEEEEEEE
T ss_pred             HHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEEEE-----ECCCCCCCCCEEEEEEE
T ss_conf             2454126237999947997599999985995103004885899999998999999983-----27756788735999999


Q ss_pred             EECCCCCEEEECCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCEEEEE
Q ss_conf             80289760899259840357303305777456009999359602388869995
Q 002442          868 LGHGGSKSAVIEPANQKAEIELGPLQLQGRHGRTVLTVRNPGVRISDDWTIKI  920 (921)
Q Consensus       868 ~G~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~w~i~~  920 (921)
                      +|+..|..|++..++....   ....++|+.++++|+|++++++++++|++++
T Consensus       819 ~g~~~~~~v~v~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~  868 (875)
T 3l4y_A          819 LGTEEPSNVTVKHNGVPSQ---TSPTVTYDSNLKVAIITDIDLLLGEAYTVEW  868 (875)
T ss_dssp             ESCCCCEEEEEEETTEEC----CCCEEEEETTTTEEEEESCCEETTCCEEEEE
T ss_pred             EECCCCCEEEEECCCCCCC---CCCCEEEECCCCEEEEECCCCCCCCCEEECH
T ss_conf             9358981899953882302---4455699388678999088610588616500


No 2  
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=1.00  E-value=1  Score=1549.60  Aligned_cols=798  Identities=28%  Similarity=0.508  Sum_probs=709.2

Q ss_pred             CCCCCCCCCCCCCCCCC-------CCCCEEEECEEEECCCCCEEEEEECC--CCCCCCCCCEEEEEEEEEECCEEEEEEE
Q ss_conf             43458832001245899-------99852873116884798299998118--8899998640899999997778999992
Q 002442           34 FRNCNQTPFCKRARSRN-------PFSCSLIANQVTISDDGDISAKLVPK--NHDDHHQINPLILSLSIYQDGIVRLKID  104 (921)
Q Consensus        34 fktC~qs~FC~R~R~~~-------~~~y~~~~~sv~~~~~~~~~a~l~~~--~~~~~~~~~~L~l~i~~~~~~~~Rv~I~  104 (921)
                      -..|.++|||+......       +..|+|.+.+++.+ +.+++|.|...  ++.||.++.+|.|+|++.+++++||||.
T Consensus        52 ~~~C~~rgCcw~~~~~~~vP~Cf~p~~~gy~~~~~~~~-~~g~~~~l~~~~~~~~~g~di~~l~l~v~~~~~~~l~v~i~  130 (898)
T 3lpp_A           52 EGICAQRGCCWRPWNDSLIPWCFFVDNHGYNVQDMTTT-SIGVEAKLNRIPSPTLFGNDINSVLFTTQNQTPNRFRFKIT  130 (898)
T ss_dssp             HHHHHHHTCEECCCSSSSSCSEECTTSSCEEEEEEEEC-SSSEEEEEEECCCCCSSSCBCSEEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEEEECC-CCCEEEEEEECCCCCCCCCCCHHEEEEEEEECCCEEEEEEC
T ss_conf             88996688874268888997336767888588667516-88679999877888778776301499999964987999865


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEECCCEEEEEECCC
Q ss_conf             29999999984102655467743332111025554346889871685078779999946849999994699189996458
Q 002442          105 EDPTLNPRKQRFQVPDVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLNSN  184 (921)
Q Consensus       105 e~~~~~~~~~Ry~vp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~i~~~~~g~~v~~~n~~  184 (921)
                      |     ++++||+||..++.....       ..             ..+.+++++++.+||+|+|+|+++|++++.. +.
T Consensus       131 d-----~~~~r~~vp~~~~~~~~~-------~~-------------~~~~~~~~~~~~~pf~~~v~r~~~g~vlf~t-~~  184 (898)
T 3lpp_A          131 D-----PNNRRYEVPHQYVKEFTG-------PT-------------VSDTLYDVKVAQNPFSIQVIRKSNGKTLFDT-SI  184 (898)
T ss_dssp             C-----TTSCCCCCCCSSSCCCCC-------CC-------------CSSCSEEEEEEETTEEEEEEETTTTEEEEEG-GG
T ss_pred             C-----CCCCCEECCHHCCCCCCC-------CC-------------CCCCCEEEEEECCCEEEEEEECCCCCEEEEC-CC
T ss_conf             8-----888707887102688988-------87-------------6786079999679818999988899487833-67


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCC-CCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             8721113445620211012434789999840699997569983562799889-888899989998789511541136566
Q 002442          185 GLFDFEEKNEGEEWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERAT-SFALKPTRGPNVEESEPYRLFNLDVFE  263 (921)
Q Consensus       185 ~l~~~e~~~~~~~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~yGlgE~~~-~l~l~~~~g~~~~~~~~y~l~n~D~~~  263 (921)
                      +.+.|+         +||.             .+...++ ++++||||||++ +|.|. +      ++++|+|||+|+++
T Consensus       185 ~~l~f~---------dq~~-------------~~~~~lp-~~~~YGlGE~~~~~~~l~-~------~~~~~~l~n~D~~~  234 (898)
T 3lpp_A          185 GPLVYS---------DQYL-------------QISARLP-SDYIYGIGEQVHKRFRHD-L------SWKTWPIFTRDQLP  234 (898)
T ss_dssp             SCCEEE---------TTEE-------------EEEEECS-SSCEEEEESSCCSSSSCC-C------SSEEEEESCCCCCC
T ss_pred             CCEEEE---------EEEE-------------EEEEECC-CCCEECCCCCCCCCCEEC-C------CCCEEEEEECCCCC
T ss_conf             755885---------0189-------------9974368-763770456678764224-7------99789888668888


Q ss_pred             CCCCCCCCCCCCEEEEEEECC-CCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECC
Q ss_conf             579999887552218998478-9863899993486249998278877665544677666321499720472899999479
Q 002442          264 YLHDSPFGLYGSIPFMISHGK-SGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGP  342 (921)
Q Consensus       264 y~~~~~~~lYg~iPf~~~~~~-~~~~~Gvf~~n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~  342 (921)
                        ..+.++|||+||||++++. ++.++||||+|+++++|++..                ...++|+++||.||+|||.||
T Consensus       235 --~~~~~~lY~~iPf~~~~~~~~~~~~Gvf~~Ns~~~~v~~~~----------------~~~~~~~~~gg~lD~y~~~Gp  296 (898)
T 3lpp_A          235 --GDNNNNLYGHQTFFMCIEDTSGKSFGVFLMNSNAMEIFIQP----------------TPIVTYRVTGGILDFYILLGD  296 (898)
T ss_dssp             --CSSCCCCSCCEEEEEEECSTTCCEEEEEECCCSCEEEEEET----------------TTEEEEEESSSCEEEEEEEES
T ss_pred             --CCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEECCC----------------CCEEEEEECCCCEEEEEEECC
T ss_conf             --87777755640279998648995799999679972687148----------------980899987885789999188


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHH
Q ss_conf             97899999987029999994212243123468899889999998500189993399952123699831135799999958
Q 002442          343 GPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPE  422 (921)
Q Consensus       343 ~p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~~Ftwd~~~FPd~~  422 (921)
                      +|++|+++|++|||+|+|||+||||||||||+|.++++|++|+++|++++||||++|+||+||+++++||||+++||||+
T Consensus       297 tp~~Vi~~Y~~LtG~p~lpP~WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp~  376 (898)
T 3lpp_A          297 TPEQVVQQYQQLVGLPAMPAYWNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFNGLP  376 (898)
T ss_dssp             SHHHHHHHHHHHHCCCCCCCGGGGSCEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTTTTHH
T ss_pred             CHHHHHHHHHHHHCCCCCCCCHHCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEECHHHCCCHH
T ss_conf             89999999999858887686100273143144799999999999998719980014764530047785017843587989


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCC-----CHHHHHHHHHCCCEEECCCC-CCEEEEEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf             9999999759928999838888899-----81556998876833666999-98023220896311248886689999641
Q 002442          423 EMQRKLATKGRHMVTIVDPHIKRDD-----SYWLHNEATEKGYYVKDATK-RDYDGWCWPGSSSYLDMLNPEIRTWWGTK  496 (921)
Q Consensus       423 ~m~~~L~~~g~k~v~iidP~i~~~~-----~y~~~~~~~~~~~~vk~~~g-~~~~g~~WpG~~~~~Df~np~a~~Ww~~~  496 (921)
                      +|+++||++|+|+++|++|+|+.++     +|.+|+++.++|+|||+++| +++.|.||||.+++|||+||++++||.++
T Consensus       377 ~mv~~Lh~~G~k~vl~idP~I~~~~~~~~~~Y~~y~eg~~~g~fvk~~~G~~~~~g~~WpG~~~~~Dftnp~a~~ww~~~  456 (898)
T 3lpp_A          377 QFVQDLHDHGQKYVIILDPAISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANE  456 (898)
T ss_dssp             HHHHHHHHTTCEEEEEECSCEECSCCTTSCCCHHHHHHHHHTCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHH
T ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf             99999997799899996786336774444450889999868957988999950477725997036089998999999999


Q ss_pred             CCCCCCCCCCCCCEEEECCCCCCCCCCC-------------------------CCCCCCCCCCCCCCCCHHHCHHHHHHH
Q ss_conf             0123334876841386058999846899-------------------------633688765578621000000124578
Q 002442          497 FSYENYVGSTPSLYIWNDMNEPSVFNGP-------------------------EVTMPRDALHLDRVEHRELHNAYGYYF  551 (921)
Q Consensus       497 ~~~~~~~g~~~~~~~W~DmnEps~f~g~-------------------------e~t~~~d~~h~~g~~~~~~HN~Yg~~~  551 (921)
                      ++.  +....+++|+|+|||||++|+..                         +.|+++|+.|++| +|+++||+||+++
T Consensus       457 ~~~--~~~~~giDg~W~DmnEp~~F~~g~~~~~~~~~l~~p~y~p~~~~~~l~~~t~~~d~~~~~g-~~~~~HNlYg~~~  533 (898)
T 3lpp_A          457 CSI--FHQEVQYDGLWIDMNEVSSFIQGSTKGCNVNKLNYPPFTPDILDKLMYSKTICMDAVQNWG-KQYDVHSLYGYSM  533 (898)
T ss_dssp             HHH--HHHHSCCSEEEECSTTTCCSSSBCTTCCCCSTTTSCSSCCSCGGGCTTTTSBCTTCEETTE-EHHHHGGGHHHHH
T ss_pred             HHH--HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHCCCCHHHHH
T ss_conf             999--8850795389990897433568753457654446888654412232234633455311588-5000023005889


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             98749999861089999838860244798764501158872544677764999998712699841357789999998768
Q 002442          552 HMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTEL  631 (921)
Q Consensus       552 ~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~l~~~l~Gip~~G~DigGF~g~~~~EL  631 (921)
                      ++|++++++++.+ ++|||+||||+|+|+|||+++|+|||.++|++|+.+|+++|++||+|+||||+|||||+|++++||
T Consensus       534 ~~at~e~l~~~~~-~~RpfilsRS~~aGsqRy~~~WsGDn~s~W~~L~~sI~~~L~~~lsG~p~~g~DIGGF~g~~~~EL  612 (898)
T 3lpp_A          534 AIATEQAVQKVFP-NKRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSLFGIPLVGADICGFVAETTEEL  612 (898)
T ss_dssp             HHHHHHHHHHHST-TBCCCEEESCCCTTGGGTCEEECCSCBSSHHHHHHHHHHHHHHHHTTCCSEECEETCSBSCCCHHH
T ss_pred             HHHHHHHHHHHCC-CCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
T ss_conf             9999999997436-888617971333777765301688655789999998999998764099724687767789998899


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             999861253232122248899999874003825--799999999999933699999999999769963245544699994
Q 002442          632 LVRWYQLGAYYPFFRAHAHHDTKRREPWLFGER--NTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDE  709 (921)
Q Consensus       632 ~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~--~~~~~r~~i~lRY~LlPY~Ytl~~~a~~~G~Pi~RPL~~~fP~D~  709 (921)
                      |+||+|+|||+||||+|++.++++||||.|+++  +.+++|++|++||+||||+||++++||.+|.|||||||++||+|+
T Consensus       613 ~~RW~Q~GaF~P~~R~H~~~~~~~~EPw~f~~~~~~~~~~r~~i~lRY~LlPYlYtl~~~a~~~G~Pv~RPL~~efP~D~  692 (898)
T 3lpp_A          613 CRRWMQLGAFYPFSRNHNSDGYEHQDPAFFGQNSLLVKSSRQYLTIRYTLLPFLYTLFYKAHVFGETVARPVLHEFYEDT  692 (898)
T ss_dssp             HHHHHHHHTTSSSCEECCCTTSCCCSGGGGCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCCCSEECTHHHHTTSG
T ss_pred             HHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCH
T ss_conf             99998875278605011699998989846698578999999999999999999999999999729853331003899986


Q ss_pred             CCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEE-CCEEEEEEEECCCCCEECCCCEEEECCCCCC
Q ss_conf             322458525324952596455168638999838984126741024984-8969999753486123406992650457878
Q 002442          710 STFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVK-GGVTHKLEVSEESVPAFQRPGTIIPRRDRFR  788 (921)
Q Consensus       710 ~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~tg~~~~-gg~~~~v~apl~~iPvfvR~GsIiP~~~~~~  788 (921)
                      +++++++|||+|++||||||+++|+++|+|||| +|.|||+|||+.+. ||+++++++|+++||||||+|+|||+++ ++
T Consensus       693 ~~~~i~dQfm~G~~LLVAPV~~~g~~~~~VYLP-~g~Wyd~~tg~~~~~gg~~i~~~apld~iPvfvR~GsIiP~~~-~~  770 (898)
T 3lpp_A          693 NSWIEDTEFLWGPALLITPVLKQGADTVSAYIP-DAIWYDYESGAKRPWRKQRVDMYLPADKIGLHLRGGYIIPIQE-PD  770 (898)
T ss_dssp             GGGGCCSSEEETTTEEEECCCSTTCSEEEEEEC-SSCEEETTTCCBCSCCSEEEEEECCTTCCEEEEETTEEEEEEC-CC
T ss_pred             HHHCCCCEEEECCCCEEEEECCCCCCEEEEECC-CCEEEECCCCCEEEECCEEEEEECCCCCCEEEEECCCEEEECC-CC
T ss_conf             775478728965871893321489707999999-9848978899599509989999778632439975881744047-44


Q ss_pred             CCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCC-CCCCEEEEEEEEEECCEEEEEEECCCCCCCCC--CCCEEEEEE
Q ss_conf             751001479718999807995449999984898932-37980999999999894789971378787777--874069799
Q 002442          789 RSSTQMVNDPYTLVVALNSSQAAEGQLYVDDGKSFD-FLEGAFIHRRFVFSNGQLKSINMAPAAGKSRF--SSECIIERI  865 (921)
Q Consensus       789 ~st~~~~~~p~~L~v~~~~~~~a~g~ly~DDG~s~~-y~~g~~~~~~f~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~i  865 (921)
                      +++.+++.+|++|+|+++.++.|+|+||+|||+|++ |++|+|..++|+++++.|++....     +.|  ....++++|
T Consensus       771 ~~t~~~~~~~~~L~v~~~~~g~a~g~lY~DDG~s~~~y~~g~y~~~~f~~~~~~l~~~~~~-----~~~~~~~~~~~~~i  845 (898)
T 3lpp_A          771 VTTTASRKNPLGLIVALGENNTAKGDFFWDDGETKDTIQNGNYILYTFSVSNNTLDIVCTH-----SSYQEGTTLAFQTV  845 (898)
T ss_dssp             SSHHHHTTSCEEEEEECCTTSEEEEEEEECCSSBTTHHHHTCSEEEEEEEETTEEEEEEEE-----ECCGGGGGCEEEEE
T ss_pred             CCHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCHHHHCCCCEEEEEEEEECCEEEEEEEE-----CCCCCCCCCEEEEE
T ss_conf             4245652162689998379974999999979970201048857999999989999999954-----67666777558899


Q ss_pred             EEEECCC-CCEEEECCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCEEEEE
Q ss_conf             9980289-760899259840357303305777456009999359602388869995
Q 002442          866 ILLGHGG-SKSAVIEPANQKAEIELGPLQLQGRHGRTVLTVRNPGVRISDDWTIKI  920 (921)
Q Consensus       866 ~i~G~~~-~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~w~i~~  920 (921)
                      +|+|+.. |..|++..++.....   ...++|+.++++|+|+++.++++++|+|++
T Consensus       846 ~i~g~~~~p~~v~v~~ng~~~~~---~~~~~y~~~~~~l~i~~~~~~~~~~~~i~w  898 (898)
T 3lpp_A          846 KILGLTDSVTEVRVAENNQPMNA---HSNFTYDASNQVLLIADLKLNLGRNFSVQW  898 (898)
T ss_dssp             EEESCCSCCSCEEEEETTCCCEE---ECCEEEETTTTEEEECSCCEETTSCEEEEC
T ss_pred             EEECCCCCCEEEEEEECCCCCCC---CCEEEECCCCCEEEECCCCCCCCCCEEEEC
T ss_conf             99906899748999769917222---210698078578998388744789859859


No 3  
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=1.00  E-value=1  Score=1527.17  Aligned_cols=791  Identities=27%  Similarity=0.480  Sum_probs=686.2

Q ss_pred             CCCCCCCCCCCCCCCCCCCCC------EEEECEEEECCCCCEEEEEECC-----CCCCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf             434588320012458999985------2873116884798299998118-----88999986408999999977789999
Q 002442           34 FRNCNQTPFCKRARSRNPFSC------SLIANQVTISDDGDISAKLVPK-----NHDDHHQINPLILSLSIYQDGIVRLK  102 (921)
Q Consensus        34 fktC~qs~FC~R~R~~~~~~y------~~~~~sv~~~~~~~~~a~l~~~-----~~~~~~~~~~L~l~i~~~~~~~~Rv~  102 (921)
                      =..|+++||||........+|      +|.+.+++.+ ..+++|.|...     +..++.++..|.|+|++++++++|||
T Consensus        24 ~~~C~~rGCcw~~~~~~~~P~Cffp~~gY~~~~~~~~-~~g~~~~l~~~~~~~~~~~~~~di~~l~l~v~~~~~~~l~v~  102 (908)
T 3top_A           24 AENCTARGCIWEASNSSGVPFCYFVNDLYSVSDVQYN-SHGATADISLKSSVYANAFPSTPVNPLRLDVTYHKNEMLQFK  102 (908)
T ss_dssp             HHHHHTTTEEECCCSSTTCCSEEESSCSEEECCCEEC-SSEEEEEEEESCHHHHTTSSSCBCSSEEEEEEECSSSEEEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEEC-CCCEEEEEECCCCCCCCCCCCCCCHHEEEEEEEECCCEEEEE
T ss_conf             8889668887116889999600526997377666534-775699811166655455789873006999999669879999


Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEECCCEEEEEEC
Q ss_conf             92299999999841026554677433321110255543468898716850787799999468499999946991899964
Q 002442          103 IDEDPTLNPRKQRFQVPDVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLN  182 (921)
Q Consensus       103 I~e~~~~~~~~~Ry~vp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~i~~~~~g~~v~~~n  182 (921)
                      |.|     ++++|||||..+ +.+...     ...             ..+..+++.++.+||+|+|+|+++|++++.. 
T Consensus       103 i~d-----~~~~r~evp~~~-~~~~~~-----~~~-------------~~~~~~~~~~~~~pF~~~v~R~s~g~vlfdt-  157 (908)
T 3top_A          103 IYD-----PNKNRYEVPVPL-NIPSMP-----SST-------------PEGQLYDVLIKKNPFGIEIRRKSTGTIIWDS-  157 (908)
T ss_dssp             EEC-----SSSCCCCCCCCC-CCCSSC-----CCC-------------TTTCCEEEEEETTTTEEEEEETTSCCEEEEC-
T ss_pred             EEC-----CCCCEEECCCCC-CCCCCC-----CCC-------------CCCCCEEEEEECCCCEEEEEECCCCCEEEEC-
T ss_conf             866-----888758888656-778888-----776-------------6786569999678848999988898388866-


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf             58872111344562021101243478999984069999756998356279988988889998999878951154113656
Q 002442          183 SNGLFDFEEKNEGEEWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVF  262 (921)
Q Consensus       183 ~~~l~~~e~~~~~~~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~  262 (921)
                      +.+.|.|+         +||             +.+...++ ++++||||||.+.+.++++      .+.+|+|||+|+.
T Consensus       158 ~~~~l~f~---------dq~-------------l~~st~lp-~~~~YGlGE~~~~~~r~~~------~~~~~~~~~~D~~  208 (908)
T 3top_A          158 QLLGFTFS---------DMF-------------IRISTRLP-SKYLYGFGETEHRSYRRDL------EWHTWGMFSRDQP  208 (908)
T ss_dssp             CSSCCEEE---------TTE-------------EEEEEECS-SSCEECCSSSCCSSSBCCC------SSEEEEESCCCCC
T ss_pred             CCCCEEEC---------CCE-------------EEEEEECC-CCCEECCCCCCCCCCCCCC------CCCEEEEEECCCC
T ss_conf             88880783---------767-------------99999768-4334504676774322446------7724520303789


Q ss_pred             CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECC
Q ss_conf             65799998875522189984789863899993486249998278877665544677666321499720472899999479
Q 002442          263 EYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGP  342 (921)
Q Consensus       263 ~y~~~~~~~lYg~iPf~~~~~~~~~~~Gvf~~n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~  342 (921)
                      .   ....+|||+|||||+++.++.++||||+|+++++|++..                ...++|++++|.||+|||.||
T Consensus       209 ~---~~~~nlYgs~Pfyl~~~~~~~~~Gvf~~Ns~~~dv~~~~----------------~~~~~~~~~gG~lD~y~~~Gp  269 (908)
T 3top_A          209 P---GYKKNSYGVHPYYMGLEEDGSAHGVLLLNSNAMDVTFQP----------------LPALTYRTTGGVLDFYVFLGP  269 (908)
T ss_dssp             S---CTTCCCSCCCCEEEEECSSSCEEEEEECCCSSEEEEEET----------------TTEEEEEESSSCEEEEEECCS
T ss_pred             C---CCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEECC----------------CCEEEEEECCCCEEEEEECCC
T ss_conf             8---777776432326999847980899999769987677348----------------982999986895889996699


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHH
Q ss_conf             97899999987029999994212243123468899889999998500189993399952123699831135799999958
Q 002442          343 GPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPE  422 (921)
Q Consensus       343 ~p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~~Ftwd~~~FPd~~  422 (921)
                      +|++|++||++|||+|+|||+||||||||||+|.++++|++|+++|++++||||+||+||+||+++++||||+ +||||+
T Consensus       270 tp~~Vi~qYt~LtG~p~mpP~WalGy~qsR~~Y~~~~ev~~vv~~~r~~~IPlDvi~~Didym~~~~~FT~d~-~FPdp~  348 (908)
T 3top_A          270 TPELVTQQYTELIGRPVMVPYWSLGFQLCRYGYQNDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSP-KFAGFP  348 (908)
T ss_dssp             SHHHHHHHHHHHHCCCCCCCGGGGSCEECCTTCCSHHHHHHHHHHHHHHTCCCCEEEECGGGSSTTCTTCCCG-GGTTHH
T ss_pred             CHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC-CCCCHH
T ss_conf             9999999999976899889723222030255689999999999988873998215886052005644064587-889989


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCC--CHHHHHHHHHCCCEEECCC-CCCEEEEEECC---------------------C
Q ss_conf             9999999759928999838888899--8155699887683366699-99802322089---------------------6
Q 002442          423 EMQRKLATKGRHMVTIVDPHIKRDD--SYWLHNEATEKGYYVKDAT-KRDYDGWCWPG---------------------S  478 (921)
Q Consensus       423 ~m~~~L~~~g~k~v~iidP~i~~~~--~y~~~~~~~~~~~~vk~~~-g~~~~g~~WpG---------------------~  478 (921)
                      +|+++||++|+|+|+||||+|+.++  .|++|+++.++|+|||+++ |+++.|.||||                     .
T Consensus       349 ~mv~~Lh~~G~k~v~iidP~I~~~~~~~Y~~y~eg~~~g~fvk~~~gg~~~~g~vWpG~~~v~~d~~~~~~~~~~~~~~~  428 (908)
T 3top_A          349 ALINRMKADGMRVILILDPAISGNETQPYPAFTRGVEDDVFIKYPNDGDIVWGKVWPDFPDVVVNGSLDWDSQVELYRAY  428 (908)
T ss_dssp             HHHHHHHHHTCEEEEEECSCEECCCCSCCHHHHHHHHHTCBCBCSSSCCBCEEEEEEECSSCCCCTTSCHHHHHHHTEEE
T ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999997798799996776257877788889988768968973898951267526897554533322222222235576


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCC-----CCCCCCCCEEEECCCCCCCCCCCCC---------------------------
Q ss_conf             31124888668999964101233-----3487684138605899984689963---------------------------
Q 002442          479 SSYLDMLNPEIRTWWGTKFSYEN-----YVGSTPSLYIWNDMNEPSVFNGPEV---------------------------  526 (921)
Q Consensus       479 ~~~~Df~np~a~~Ww~~~~~~~~-----~~g~~~~~~~W~DmnEps~f~g~e~---------------------------  526 (921)
                      ++||||+||+|++||.++++...     ..+..+++|+|+|||||++|+.++.                           
T Consensus       429 ~~fpDftnp~ar~WW~~~~~~~~~~~~~~~~~~gvdg~W~DmnEPs~F~~g~~~~~~~~~~l~~ppy~p~~~~~~~~l~~  508 (908)
T 3top_A          429 VAFPDFFRNSTAKWWKREIEELYNNPQNPERSLKFDGMWIDMNEPSSFVNGAVSPGCRDASLNHPPYMPHLESRDRGLSS  508 (908)
T ss_dssp             EECBCTTSHHHHHHHHHHHHHHHSCSSCGGGCCCCSEEEECSTTTCCSSSSSSSSCCCCTTTSSCSSCCSCTTGGGTTTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             24646899899999999999987522343446786589980688654556532346764334588643333345666433


Q ss_pred             -CCCCCCCCCC----CCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCHHHHHHH
Q ss_conf             -3688765578----62100000012457898749999861089999838860244798764501158872544677764
Q 002442          527 -TMPRDALHLD----RVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVS  601 (921)
Q Consensus       527 -t~~~d~~h~~----g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~s  601 (921)
                       |+++++.|+.    +.+|+++||+||+++++|+++|++++.  ++|||+||||+|+|+|||+++|+|||.++|++|+.+
T Consensus       509 ~t~~~~~~~~~~dG~~~~h~~vHNlYg~~~~~atye~l~~~~--~~RpfilsRS~~aGsqry~~~WtGDn~s~W~~L~~s  586 (908)
T 3top_A          509 KTLCMESQQILPDGSLVQHYNVHNLYGWSQTRPTYEAVQEVT--GQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKS  586 (908)
T ss_dssp             TSCCTTCEEECSSSCEEEHHHHGGGHHHHHHHHHHHHHHHHH--SSCCCEEESSCCTTGGGTCEEECCCCBSSTHHHHHH
T ss_pred             CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHH
T ss_conf             643455415415887420333331258999999999999612--898528984222677775660597524208999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999871269984135778999999876899986125323212224889999987400382579999999999993369
Q 002442          602 VPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLP  681 (921)
Q Consensus       602 i~~~l~~~l~Gip~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRY~LlP  681 (921)
                      |+++|++||+|+||||+|||||+|++++|||+||+|+|||+||||+|++.++++||||.|++++.+++|++|++||+|||
T Consensus       587 i~~~L~~~lsG~p~~g~DIgGF~g~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlP  666 (908)
T 3top_A          587 IIGMMEFSLFGISYTGADICGFFQDAEYEMCVRWMQLGAFYPFSRNHNTIGTRRQDPVSWDVAFVNISRTVLQTRYTLLP  666 (908)
T ss_dssp             HHHHHHHHHHTCCSEECBTTCSBSCCCHHHHHHHHHHHTTSSSCEECCCSSSCCCSGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999886209862357637648999889999998872277003614799987768724798999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEEC-CE
Q ss_conf             99999999997699632455446999943224585253249525964551686389998389841267410249848-96
Q 002442          682 YFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVKG-GV  760 (921)
Q Consensus       682 Y~Ytl~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~tg~~~~g-g~  760 (921)
                      |+||++++||.+|.|||||||++||+|++++++++|||+|++||||||+++|+++|+|||| +|.|||+||++.+.| |+
T Consensus       667 YlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~lLVaPV~~~g~~~~~vYLP-~g~Wyd~~tg~~~~g~g~  745 (908)
T 3top_A          667 YLYTLMHKAHTEGVTVVRPLLHEFVSDQVTWDIDSQFLLGPAFLVSPVLERNARNVTAYFP-RARWYDYYTGVDINARGE  745 (908)
T ss_dssp             HHHHHHHHHHHHCCCSEECGGGTCTTCTTTTTCCSSEEETTTEEEECCCSSSCCEEEEEEC-SSCEEETTTCCBCCCSSE
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEECCCEEEEEECCCCCEEEEEECC-CCEEEECCCCCEEECCCE
T ss_conf             9999999999639873045204688986785478637855871895312489607999869-973476699858965997


Q ss_pred             EEEEEEECCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCC-CCCCCEEEEEEEEEEC
Q ss_conf             999975348612340699265045787875100147971899980799544999998489893-2379809999999998
Q 002442          761 THKLEVSEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSSQAAEGQLYVDDGKSF-DFLEGAFIHRRFVFSN  839 (921)
Q Consensus       761 ~~~v~apl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~~~a~g~ly~DDG~s~-~y~~g~~~~~~f~~~~  839 (921)
                      ++++++||++||||+|+|+|||++++ .+++..++.+|++|+|+++.++.|+|+||+|||+|+ +|++|+|..++|++++
T Consensus       746 ~~~~~apl~~iPvfvR~GsIiP~~~~-~~~t~~~~~~~~~l~v~~~~~g~a~g~lY~DDG~s~~~y~~g~y~~~~f~~~~  824 (908)
T 3top_A          746 WKTLPAPLDHINLHVRGGYILPWQEP-ALNTHLSRQKFMGFKIALDDEGTAGGWLFWDDGQSIDTYGKGLYYLASFSASQ  824 (908)
T ss_dssp             EEEEECCTTCCEEEEETEEEEEEECC-CSSHHHHTTSCEEEEEECBTTBCEEEEEEECCSSSTTTGGGSCCEEEEEEECS
T ss_pred             EEEEECCCCCEEEEEECCEEEEECCC-CCCHHHHCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHCCCCEEEEEEEEEC
T ss_conf             99995586413699989868200474-44313315897799999489986999999979986314228877999999989


Q ss_pred             CEEEEEEECCCCCCCCC---CCCEEEEEEEEEECCCC--CEEEECCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCC
Q ss_conf             94789971378787777---87406979999802897--6089925984035730330577745600999935960238
Q 002442          840 GQLKSINMAPAAGKSRF---SSECIIERIILLGHGGS--KSAVIEPANQKAEIELGPLQLQGRHGRTVLTVRNPGVRIS  913 (921)
Q Consensus       840 ~~l~~~~~~~~~~~~~~---~~~~~~~~i~i~G~~~~--~~v~v~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~  913 (921)
                      +.|++...     .+.|   .....+++|+|+|+..+  ..+.+..++...     ++.++|+.++++|+|+.+++.+.
T Consensus       825 ~~l~~~~~-----~~~y~~~~~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~l~i~~~~~~~~  893 (908)
T 3top_A          825 NTMQSHII-----FNNYITGTNPLKLGYIEIWGVGSVPVTSVSISVSGMVI-----TPSFNNDPTTQVLSIDVTDRNIS  893 (908)
T ss_dssp             SCEEEEEE-----EESSCCSSSCCBEEEEEEECCCSSCCCSCCCEESSSEE-----CCCCEECSSSCCEECCCTTSCCB
T ss_pred             CEEEEEEC-----CCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCEEE-----EEEEEECCCCCEEEEEECCCEEE
T ss_conf             99999973-----07713578884688999997248988428999899370-----01479878776899990784211


No 4  
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=1.00  E-value=1  Score=1352.46  Aligned_cols=755  Identities=21%  Similarity=0.387  Sum_probs=643.8

Q ss_pred             CEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf             11688479829999811888999986408999999977789999922999999998410265546774333211102555
Q 002442           59 NQVTISDDGDISAKLVPKNHDDHHQINPLILSLSIYQDGIVRLKIDEDPTLNPRKQRFQVPDVVLPQFESKKLYLQRYSK  138 (921)
Q Consensus        59 ~sv~~~~~~~~~a~l~~~~~~~~~~~~~L~l~i~~~~~~~~Rv~I~e~~~~~~~~~Ry~vp~~l~~~~~~~~~~~~~~~~  138 (921)
                      .+.+.+ ++++.....           .-.++|+++.++++||++...+.   ..+.|    ++++.+....+.+.+.  
T Consensus        39 ~~~~~~-~~~~~~~~~-----------~~~~~i~~~~~~iiRv~~~~~~~---~~~s~----av~~~~~~~~~~v~~~--   97 (817)
T 4ba0_A           39 KEHKLR-NDGLVITTN-----------QGNIRLQFKSEAAIEVLYRADSK---QLPSF----ALAQPESAIKAQLTET--   97 (817)
T ss_dssp             EEEECC-SSSEEEEET-----------TEEEEEEEEETTEEEEEESTTSC---CCCCS----SCSSTTCCCCCEEEEC--
T ss_pred             EEEEEC-CCEEEEEEC-----------CEEEEEEEECCCEEEEEEECCCC---CCCCE----EEECCCCCCCEEEEEC--
T ss_conf             689992-999999989-----------95899999889989999977998---89990----7757898884599974--


Q ss_pred             CCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEE
Q ss_conf             43468898716850787799999468499999946991899964588721113445620211012434789999840699
Q 002442          139 ETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLNSNGLFDFEEKNEGEEWEERFRGHTDTRPYGPQSISF  218 (921)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~i~~~~~g~~v~~~n~~~l~~~e~~~~~~~~~~~f~~~~d~~p~gp~~v~~  218 (921)
                             +..+.+.+.+++++|+++||+|++++  +|++++.. ..++ .+                      +...+.+
T Consensus        98 -------~~~~~i~t~~l~v~i~~~p~~i~~~~--~g~~l~~~-~~~~-~~----------------------~~~~~~~  144 (817)
T 4ba0_A           98 -------ENHLQFSGGTLTARIQKRPFAISYYR--DSELLLAE-ESGF-QV----------------------NTDKINF  144 (817)
T ss_dssp             -------SSEEEEECSSEEEEEETTTTEEEEEE--TTEEEEEE-EEEE-EC----------------------C--CEEE
T ss_pred             -------CCEEEEEECCEEEEEECCCEEEEEEE--CCEEEEEE-CCCC-EE----------------------ECCCEEE
T ss_conf             -------99999996999999986886999997--99499982-5773-55----------------------0771599


Q ss_pred             EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC
Q ss_conf             99756998356279988988889998999878951154113656657999988755221899847898638999934862
Q 002442          219 DVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAE  298 (921)
Q Consensus       219 ~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~y~~~~~~~lYg~iPf~~~~~~~~~~~Gvf~~n~~~  298 (921)
                      .+.++.+|++||||||+..|+++         |++++|||+|.++|..++. ++|++|||+++++    ++||||+|++.
T Consensus       145 ~~~l~~~e~~yGlGe~~~~l~~~---------G~~~~l~n~d~~~~~~~~~-~~y~~iPf~~s~~----~yGvf~dn~~~  210 (817)
T 4ba0_A          145 RFYLSPGEKILGGGQRILGMDRR---------GQRFPLYNRAHYGYSDHSG-QMYFGLPAIMSSK----QYILVFDNSAS  210 (817)
T ss_dssp             EEECCTTCCEEEEESCBSCSCCT---------TEEEEECCCCCTTCCSCBS-SCSCEEEEEEETT----SEEEEECCCSS
T ss_pred             EEECCCCCEEECCCCCCCCCCCC---------CCEEEEEECCCCCCCCCCC-CCCCCCCEEEECC----CEEEEEECCCC
T ss_conf             99869985288576457873459---------9799877658777677886-5333543899667----48999987886


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             49998278877665544677666321499720472899999479978999999870299999942122431234688998
Q 002442          299 MQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDE  378 (921)
Q Consensus       299 ~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~  378 (921)
                      +++|+..+              ....++|.+++|.+|+|||.||+|++|+++|++|||+|+|||+||||||||||+|.++
T Consensus       211 ~~~d~~~~--------------~~~~~~~~~~gg~ld~y~~~G~~p~~v~~~Y~~ltG~~~lpP~WalG~~~sr~~Y~s~  276 (817)
T 4ba0_A          211 GAMDIGKT--------------ESDILQLEAKSGRSAYILVAGNSYPSLIENFTQVTGRQPLPPRWALGSFASRFGYRSE  276 (817)
T ss_dssp             EEEEESSS--------------STTEEEEEESSSCCEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSBEECCBCCCSH
T ss_pred             EEEEEEEC--------------CCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCH
T ss_conf             69999707--------------9987999982783799995699999999999986099877983113760542558999


Q ss_pred             HHHHHHHHHCCCCCCCCEEEEEECCCC-----CCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
Q ss_conf             899999985001899933999521236-----998311357999999589999999759928999838888899815569
Q 002442          379 EDVEQVDSKFDEHDIPYDVLWLDIEHT-----DGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHN  453 (921)
Q Consensus       379 ~~v~~v~~~~~~~~IP~D~iwlDi~~~-----~~~~~Ftwd~~~FPd~~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~  453 (921)
                      ++|++++++|++++||||++|+|++|+     +.+++||||+++||||++|+++||++|+|+++|++|+|+.++  ..|+
T Consensus       277 ~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPdp~~mv~~Lh~~G~k~vl~i~P~I~~~s--~~y~  354 (817)
T 4ba0_A          277 AETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPTPLDMMADFKQQGVKTVLITEPFVLTSS--KRWD  354 (817)
T ss_dssp             HHHHHHHHHHHHHTCCCCEEEECGGGSCSSSSSCTTCCSCCTTTCSCHHHHHHHHHHTTCEEEEEECSEEETTS--TTHH
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC--HHHH
T ss_conf             99999999988737997489983652377563543762026100889899999999779989999677746886--7789


Q ss_pred             HHHHCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             98876833666999980232208963112488866899996410123334876841386058999846899633688765
Q 002442          454 EATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDAL  533 (921)
Q Consensus       454 ~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Df~np~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~  533 (921)
                      ++.++|+|+|+++|+++.+.||||.+++|||+||+|++||.++++...   ..+++++|+|||||+++       |.|+.
T Consensus       355 e~~~~g~~vk~~~G~~~~~~~w~G~~~~~DftnP~ar~ww~~~~~~l~---~~GvDg~W~DmnEp~~~-------p~d~~  424 (817)
T 4ba0_A          355 DAVKAKALAKDPQGQPKAFELYFGNGGIIDVFSKEGSRWFSSIYKDLS---KQGVAGWWGDLGEPEMH-------PEDTQ  424 (817)
T ss_dssp             HHHHTTCBCBCTTSSBCCEEETTEEEEEBCTTSHHHHHHHHHHHHHHH---HHTCCEEEECCTTTSSC-------CTTCE
T ss_pred             HHHHCCEEEECCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHH---HCCCCEEEECCCCCCCC-------CCCCC
T ss_conf             887599899989998578886589851166899899999999999997---57974899568887768-------85422


Q ss_pred             CCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC-EECCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             5786210000001245789874999986108999983886024479876450-115887254467776499999871269
Q 002442          534 HLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VWTGDNTAEWEQLRVSVPMILTLGLTG  612 (921)
Q Consensus       534 h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~-~WtGDn~s~W~~L~~si~~~l~~~l~G  612 (921)
                      |++| +|+++||+||++++++++++++++. +++|||+||||+|+|+|||++ +|+|||.++|++|+.+|+++|++||+|
T Consensus       425 ~~~g-~~~~~hN~Y~~~~~~a~~e~~~~~~-~~~RpfilsRs~~aGsqry~~~~WsGDn~s~W~~L~~~i~~~L~~~lsG  502 (817)
T 4ba0_A          425 HAIG-DADTVHNAYGHRWAEMLYQQQLDQF-PELRPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLASQVELALQMSLLG  502 (817)
T ss_dssp             ETTE-EHHHHGGGHHHHHHHHHHHHHHHHC-TTSCCCEEESCCCTTGGGGTEEEBCCSCBSSHHHHHTHHHHHHHHHHTT
T ss_pred             CCCC-CHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             1699-7788655889999999999999736-8986489988505754557766748863377789999899998775308


Q ss_pred             CCCCCCCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             98413577899999--9876899986125323212224889999987400382579999999999993369999999999
Q 002442          613 MSFSGADVGGFFGN--PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFREA  690 (921)
Q Consensus       613 ip~~G~DigGF~g~--~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRY~LlPY~Ytl~~~a  690 (921)
                      +||||+|||||+|+  +++|||+||+|+|||+|+||+|++ +..++|||.|++++.+++|+++++||+||||+||++++|
T Consensus       503 ~p~~g~DIGGF~g~~~~~~EL~~RW~Q~gaF~P~~R~H~~-~~~~~epw~~~~~~~~~~r~~i~lRy~LlPYlYtl~~~a  581 (817)
T 4ba0_A          503 FGYIHSDLGGFADGETLDKEMYIRWLQYGVFQPVYRPHGQ-DHIPSEPVFQDEETKAILRPLVKLRYRMLPYIYTAAYQN  581 (817)
T ss_dssp             CTTCBCCBTCCBCCSSCCHHHHHHHHHHHHTSSCBCBCCB-TTSCCSGGGSCHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9723567277789998998999999886417721570378-888999853680799999999999999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEECCEEEE-CCEEEEEEEECC
Q ss_conf             9769963245544699994322458525324952596455168638999838984126741024984-896999975348
Q 002442          691 NTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVK-GGVTHKLEVSEE  769 (921)
Q Consensus       691 ~~~G~Pi~RPL~~~fP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~tg~~~~-gg~~~~v~apl~  769 (921)
                      |.+|.|||||||++||+|++++++++|||+|++||||||+++|+++|+|||| +|.|||+||++.++ ||+++++++|++
T Consensus       582 ~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~lLVaPV~~~g~~~~~vYLP-~g~Wyd~~tg~~~~~Gg~~~~~~apl~  660 (817)
T 4ba0_A          582 TLTGMPLMRPLFFSDEKNPALIDNKTSYFWGDSLLVTPITQAGVESVSIPAP-KGVWFDFWKDTRYQTDGAPLTLPTDLH  660 (817)
T ss_dssp             HHHCCCSEEEGGGGCTTCGGGGGCCSCEEETTTEEECCCCSTTCCEEEECCC-SEEEEETTTCCEEEESSSCEEEECCSS
T ss_pred             HHHCCCCCCCCCCCCCCCHHHHCCCCEEEECCCEEEEECCCCCCCEEEEECC-CCEEEECCCCCEEEECCEEEEEECCCC
T ss_conf             9619875355444699976784449885438857998612589647999908-823898689959964998999973764


Q ss_pred             CCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCC-CCEEEEEEEECCCCCC-CCCCEEEEEEEEEEC--CEEEEE
Q ss_conf             612340699265045787875100147971899980799-5449999984898932-379809999999998--947899
Q 002442          770 SVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSS-QAAEGQLYVDDGKSFD-FLEGAFIHRRFVFSN--GQLKSI  845 (921)
Q Consensus       770 ~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~-~~a~g~ly~DDG~s~~-y~~g~~~~~~f~~~~--~~l~~~  845 (921)
                      +||||+|+|+|||++++. +++.+.+.++++|.|+++.+ +.|+|+||+|||+|++ |++|+|..++|+++.  +.++..
T Consensus       661 ~iPvfvR~GsIiP~~~~~-~~~~~~~~~~l~l~v~~~~~~~~a~~~ly~DDG~s~~~y~~g~y~~~~~~~~~~~~~l~i~  739 (817)
T 4ba0_A          661 TIPVLVKAGAFMPYVPAV-STTEDYRSDSLEIHYYADASVPLAQGEIFEDDGKDPNSIKRNQFDLLTLQATHTDNQLHFQ  739 (817)
T ss_dssp             CCCEEEETTCEEEECCCC-SSGGGCCCSEEEEEEECCTTCSEEEEEEEECCSCCTTTTTTTCSEEEEEEEEECSSEEEEE
T ss_pred             CCEEEEECCEEEEECCCC-CCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCHHHCCCCCEEEEEEEEEECCCEEEEE
T ss_conf             330599678174406766-6654358762599999458897799999978998642304774899999999739999999


Q ss_pred             EECCCCCCC-CCC--CCEEEEEEEEEECCC-CCEEEECCCCCEEE-----EEECCEEEEEECCCCEEEEECCCCCCCCCE
Q ss_conf             713787877-778--740697999980289-76089925984035-----730330577745600999935960238886
Q 002442          846 NMAPAAGKS-RFS--SECIIERIILLGHGG-SKSAVIEPANQKAE-----IELGPLQLQGRHGRTVLTVRNPGVRISDDW  916 (921)
Q Consensus       846 ~~~~~~~~~-~~~--~~~~~~~i~i~G~~~-~~~v~v~~~~~~~~-----~~~~~~~~~~~~~~~~l~i~~~~~~~~~~w  916 (921)
                      ...    .+ .|.  +..+..+|+|+|+.. |..|++  +|+.+.     ++..+..+.|+..+++|+|+-+...  ++.
T Consensus       740 ~~~----~gg~y~~~~~~~~~~v~i~g~~~~p~~v~~--~g~~~~~~~~~~~~~~~~~~yd~~~~~l~i~~~~~~--~~~  811 (817)
T 4ba0_A          740 LAR----TGKGYRGMPERRATTLVIHNASDQYQHLDI--NGKTIAIAQADCASTPALACYDQERRQLQLVFTWGR--EAL  811 (817)
T ss_dssp             EEE----ESCCCTTCCSSEEEEEEEETCCTTCCEEEE--TTEEEECBCSCGGGSCCSEEEETTTTEEEEEEEECS--SCE
T ss_pred             EEE----CCCCCCCCCCCCEEEEEEECCCCCCEEEEE--CCEECCCCCCCHHCCCCCEEEECCCCEEEEEECCCC--CCE
T ss_conf             985----167766777554799999798999669999--999963320100024665599477878999956899--865


Q ss_pred             EEEE
Q ss_conf             9995
Q 002442          917 TIKI  920 (921)
Q Consensus       917 ~i~~  920 (921)
                      +|.+
T Consensus       812 ~~~~  815 (817)
T 4ba0_A          812 NLRL  815 (817)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             8996


No 5  
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=1.00  E-value=1  Score=1316.17  Aligned_cols=580  Identities=27%  Similarity=0.546  Sum_probs=535.1

Q ss_pred             CEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf             06999975699835627998898888999899987895115411365665799998875522189984789863899993
Q 002442          215 SISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWL  294 (921)
Q Consensus       215 ~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~y~~~~~~~lYg~iPf~~~~~~~~~~~Gvf~~  294 (921)
                      .+.++++++.+|++||||||+++|+++         +++|+|||+|++++. .+.++|||+||||++++  +.+|||||+
T Consensus        40 ~~~~~~~l~~~e~~YGlGE~~~~l~~~---------g~~~~l~n~D~~~~~-~~~~~lY~~~Pf~~~~~--~~~~Gvf~~  107 (666)
T 3nsx_A           40 GFAFTYIMDEDDIVYGLGESNRGINKR---------GYCYISNCTDDPIHT-EDKRSLYGAHNFIIVSG--KTTFGLFFD  107 (666)
T ss_dssp             SEEEEEECCTTCEEEECSSCSSCSSCT---------TEEEEECCCCCSSCC-TTCCCCSEECCEEEEES--SSCEEEEEE
T ss_pred             CEEEEEECCCCCEEEECCCCCCCCCCC---------CCEEEECCCCCCCCC-CCCHHHHHCCEEEEEEC--CCCEEEEEE
T ss_conf             637996248666575046455564456---------517864168998765-65021010020799976--733468982


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             48624999827887766554467766632149972047289999947997899999987029999994212243123468
Q 002442          295 NAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWN  374 (921)
Q Consensus       295 n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~  374 (921)
                      |+++++||+..+              ....++|++++|.||+|||.||+|++|+++|++|||+|+|||+||||||||||+
T Consensus       108 n~~~~~~d~~~~--------------~~~~~~~~~~~g~lD~y~~~G~~p~~v~~~Y~~ltG~~~lpP~walG~~qsr~~  173 (666)
T 3nsx_A          108 YPSKLTFDIGYT--------------RMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRSYIPPKFAFGFGQSRWG  173 (666)
T ss_dssp             CCSCEEEEESSS--------------STTEEEEEESSCCEEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSEEEEETT
T ss_pred             CCCCEEEEECCC--------------CCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             687579970355--------------466489998358668999818998999999998607554796010245635346


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf             89988999999850018999339995212369983113579999995899999997599289998388888998155699
Q 002442          375 YRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNE  454 (921)
Q Consensus       375 Y~~~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~~Ftwd~~~FPd~~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~  454 (921)
                      |.++++|++|+++|++++||||++|+||+||+++++||||+++||||++|+++||++|+|+++||||+|+.+.+|++|++
T Consensus       174 Y~~~~~v~~v~~~~~~~~IP~dvi~lD~dy~~~~~~ft~d~~~FPdp~~mv~~Lh~~G~k~v~~idP~i~~~~~~~~y~e  253 (666)
T 3nsx_A          174 YTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEE  253 (666)
T ss_dssp             CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTCTTHHHHHHHHHTTTCEEEEEEESCEECCTTCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCHHHHH
T ss_conf             68989999999878862997316998307777514651072008778999999987691597663155344247117764


Q ss_pred             HHHCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC-------
Q ss_conf             8876833666999980232208963112488866899996410123334876841386058999846899633-------
Q 002442          455 ATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVT-------  527 (921)
Q Consensus       455 ~~~~~~~vk~~~g~~~~g~~WpG~~~~~Df~np~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t-------  527 (921)
                      +.++|+|||+++|+++.|.||||.++||||+||+|++||.++++..  . ..+++|+|+|||||++|++++..       
T Consensus       254 ~~~~g~fvk~~~G~~~~g~~WpG~~~~pDftnp~a~~ww~~~~~~~--~-~~Gidg~W~DmnEp~~f~~~~~~~~~~~~~  330 (666)
T 3nsx_A          254 GVKNNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFL--I-DQGIEGFWNDMNEPAIFYSSEGLAEAKEFA  330 (666)
T ss_dssp             HHHTTCBCBCTTSCBCCEEETTEEEECBCTTSHHHHHHHHHTTHHH--H-TTTCCEEEEESTTTCCSEEHHHHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH--H-HCCCHHHHHCCCCCCEEECHHHHHHHHHHH
T ss_conf             0103821147789822688457756784326978999865554687--8-546233210468862475587899999998


Q ss_pred             --CC--------------------------CCCCCC---CCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf             --68--------------------------876557---86210000001245789874999986108999983886024
Q 002442          528 --MP--------------------------RDALHL---DRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAF  576 (921)
Q Consensus       528 --~~--------------------------~d~~h~---~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~  576 (921)
                        ++                          .+..|.   ++.+|+++||+||+++++|++++++++.+ ++|||+||||+
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~h~~~g~~~~~~~~hNlYg~~~~~at~e~l~~~~~-~~RpfilsRS~  409 (666)
T 3nsx_A          331 GEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAFERIDP-EKRFLMFSRSS  409 (666)
T ss_dssp             HHHHHCCSSCSCHHHHHHHHHHTTTCHHHHTSCEEEETTEEEEGGGGGGGHHHHHHHHHHHHHHHHCT-TCCCEEEESSE
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHCC-CCEEEEEECCC
T ss_conf             76442566611234577887652288578787760158828751131222020001778899986198-74399986100


Q ss_pred             CCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             47987645011588725446777649999987126998413577899999987689998612532321222488999998
Q 002442          577 FAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRR  656 (921)
Q Consensus       577 f~Gsqry~~~WtGDn~s~W~~L~~si~~~l~~~l~Gip~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~  656 (921)
                      |+|+|||+++|+|||.|+|++|+.||+++|++||+|+||||+|||||.|++++|||+||+|+|||+||||+|++.++++|
T Consensus       410 ~aGsqry~~~W~GDn~s~W~~L~~sI~~~L~~~l~G~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~  489 (666)
T 3nsx_A          410 YIGMHRYGGIWMGANKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQ  489 (666)
T ss_dssp             ETTGGGTCEEEECCSSCCTHHHHHHHHHHHHHHHTTCCSEEECCCCCBTCSCHHHHHHHHHHHTTSSSEEEEECSSBCCC
T ss_pred             EECEEECCCEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
T ss_conf             11100037563178713899998764425644300046655655767877348999999987337665504544574301


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEE
Q ss_conf             74003825799999999999933699999999999769963245544699994322458525324952596455168638
Q 002442          657 EPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKH  736 (921)
Q Consensus       657 ePw~~~~~~~~~~r~~i~lRY~LlPY~Ytl~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~  736 (921)
                      |||.|+  +.+++|++|++||+||||+||++++||.+|.|||||||++||+|++++++++|||+|++||||||+++|+++
T Consensus       490 ePw~~~--~~~~~r~~i~lRy~LlPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~dQfm~G~~LLVaPV~~~g~~~  567 (666)
T 3nsx_A          490 ECYQFE--NIEDFRSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIAPVYEQNARG  567 (666)
T ss_dssp             CGGGST--TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEECHHHHCTTCTTGGGCCSCEEETTTEEECCCCSTTCSE
T ss_pred             CCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCCEEEEEEEEECCCC
T ss_conf             131147--889987776555456788899999987348805511103578737877644552126624772133205661


Q ss_pred             EEEECCCCCEEEEE------ECCEEEECCEEEEEEEECCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             99983898412674------102498489699997534861234069926504578787510014797189998079954
Q 002442          737 ISVYLPGKESWYDI------RTGARVKGGVTHKLEVSEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSSQA  810 (921)
Q Consensus       737 ~~vylP~~g~Wyd~------~tg~~~~gg~~~~v~apl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~~~  810 (921)
                      |+|||| +|.|||+      +|++.+.||+ +.+++||++||||||+|+|||++++ .+++.+++.+|++|+|+    +.
T Consensus       568 ~~vYLP-~g~W~d~~~~~~~~t~~~~~gG~-~~v~apl~~iPvfvR~GsIiP~~~~-~~~t~~~~~~~~~l~v~----~~  640 (666)
T 3nsx_A          568 RYVYLP-EEMKFIKFMPDGSISEEVLEKGV-HYVDVALNEVPLFIRSGKCIPVAEA-AECVKDIDTENMQLIGY----EG  640 (666)
T ss_dssp             EEEEES-SCEEEEEECTTSCEEEEEECSEE-EEEECCTTCEEEEEETTCEEEECCC-CSSGGGCCCSSCEEEEC----TT
T ss_pred             EEEECC-HHEEEEEEECCCCEEEEEECCCC-EEEEEECCEEEEEEECCCEEEECCC-HHHHHHCCHHHEEEEEC----CC
T ss_conf             389763-05079997048831478705873-1588532104699875836664550-22032258737079840----89


Q ss_pred             EEEEEEEECCCCCCCCCCE-EEEE
Q ss_conf             4999998489893237980-9999
Q 002442          811 AEGQLYVDDGKSFDFLEGA-FIHR  833 (921)
Q Consensus       811 a~g~ly~DDG~s~~y~~g~-~~~~  833 (921)
                      |+|+||+|||+|++|++|+ |..+
T Consensus       641 a~~~LY~DDG~s~~y~~G~~y~~i  664 (666)
T 3nsx_A          641 SSYTLYEDDGIHKDYDKKENYRVL  664 (666)
T ss_dssp             CEEEEECCCSSSCCCCCGGGEEEE
T ss_pred             CCEEEECCCCCCCCCCCCCCEEEE
T ss_conf             723677479824587776434861


No 6  
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*
Probab=1.00  E-value=1  Score=1246.25  Aligned_cols=791  Identities=20%  Similarity=0.360  Sum_probs=608.8

Q ss_pred             CEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCC--------CCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCE
Q ss_conf             408999999977789999922999999998410265--------546774333211102555434688987168507877
Q 002442           85 NPLILSLSIYQDGIVRLKIDEDPTLNPRKQRFQVPD--------VVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGY  156 (921)
Q Consensus        85 ~~L~l~i~~~~~~~~Rv~I~e~~~~~~~~~Ry~vp~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (921)
                      ..+.++|+++.++++||++.+.+.+.  ...+. |.        +.++........+..        +.+..+.+.+.++
T Consensus        64 ~~~~~~i~~~~~~i~Rv~~~~~g~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~t~~l  132 (1027)
T 2x2h_A           64 HPVQVQVTSYNNNSYRVRFNPDGPIR--DVTRG-PILKQQLDWIRTQELSEGCDPGMTF--------TSEGFLTFETKDL  132 (1027)
T ss_dssp             EEEEEEEEETTTTEEEEEECTTSSCC--CCSSS-SSCHHHHHHHHHHHHHTTCCCCCEE--------CTTSCEEEECSSE
T ss_pred             CCEEEEEEEECCCEEEEEEECCCCCC--CCCCC-CCCCCCCCCEEEECCCCCCCCEEEE--------CCCCEEEEEECCE
T ss_conf             97189999965996999984698756--64335-3334565511330455567731674--------3798699992879


Q ss_pred             EEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCC-CCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCC
Q ss_conf             99999468499999946991899964588721113-44562021101243478999984069999756998356279988
Q 002442          157 EAVLRHDPFEVYVRYKGGNSRVLSLNSNGLFDFEE-KNEGEEWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERA  235 (921)
Q Consensus       157 ~v~i~~~PF~i~i~~~~~g~~v~~~n~~~l~~~e~-~~~~~~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~yGlgE~~  235 (921)
                      +|+|. +||+|+|+++.+|++++. +....+..+. +..+..+.+++.+....    ...+.+.+.+...|++|||||+.
T Consensus       133 ~v~i~-~~~~i~v~~~~~g~~l~~-d~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~~~~~~~E~~yGlGE~~  206 (1027)
T 2x2h_A          133 SVIIY-GNFKTRVTRKSDGKVIME-NDEVGTASSGNKCRGLMFVDRLYGNAIA----SVNKNFRNDAVKQEGFYGAGEVN  206 (1027)
T ss_dssp             EEEEC-TTCCEEEEETTTCCEEEE-BCEECCSSSCCEEEEEEEECTTTCCCEE----EEEECCTTCTTTCCEEEECTTCC
T ss_pred             EEEEE-CCCEEEEEECCCCEEEEE-ECCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCEEEEEECCCCCCEECCCCCC
T ss_conf             99994-683899998899859876-0555545344445542113322343223----22136998348998378776546


Q ss_pred             CC------CCCCCCCCCCCCCCCCEEEEECCCCCCCC--------CC---C---CCCCCCEEEEEEECC----CCCEEEE
Q ss_conf             98------88899989998789511541136566579--------99---9---887552218998478----9863899
Q 002442          236 TS------FALKPTRGPNVEESEPYRLFNLDVFEYLH--------DS---P---FGLYGSIPFMISHGK----SGRTSGF  291 (921)
Q Consensus       236 ~~------l~l~~~~g~~~~~~~~y~l~n~D~~~y~~--------~~---~---~~lYg~iPf~~~~~~----~~~~~Gv  291 (921)
                      +.      |+++         |+.+.+||+|.+.|..        ++   +   .+||++||||++++.    ++.++||
T Consensus       207 g~f~~~~~L~~r---------G~~~~~wN~D~~~y~~~~~~~~g~~s~~dp~~~~~lY~siPf~is~~~~g~~~~~~yGv  277 (1027)
T 2x2h_A          207 CKYQDTYILERT---------GIAMTNYNYDNLNYNQWDLRPPHHDGALNPDYYIPMYYAAPWLIVNGCAGTSEQYSYGW  277 (1027)
T ss_dssp             EEETTEEESCCC---------SCEEEECCCCCGGGCCGGGCCTTCCSCCCCCTTSCCSEECCEEEEEESTTSTTCEEEEE
T ss_pred             CCCCCCCCCCCC---------CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEE
T ss_conf             766666541457---------86721146056544554445667765457433434345306699843566777856999


Q ss_pred             EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEE--CCCHHHHHHHHHHCCCC----------CC
Q ss_conf             9934862499982788776655446776663214997204728999994--79978999999870299----------99
Q 002442          292 FWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFV--GPGPKDVVRQYTSVTGM----------PS  359 (921)
Q Consensus       292 f~~n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~--G~~p~~vi~~Y~~ltG~----------p~  359 (921)
                      |++|++.+.+|++.+.++..         ......+.+++|.+|+|||.  ||+|++|+++|++|||+          |+
T Consensus       278 f~dn~~~~~fD~g~~~~~~~---------~~~~~~~~~~~g~lD~y~~~g~G~tp~~Vv~~Yt~LTGkp~~~~~ltGrp~  348 (1027)
T 2x2h_A          278 FMDNVSQSYMNTGDTTWNSG---------QEDLAYMGAQYGPFDQHFVYGAGGGMECVVTAFSLLQGKEFENQVLNKRSV  348 (1027)
T ss_dssp             EECCCSSEEEESSCCGGGCC---------CTTEEEEEESSCCEEEEEECCSSSSHHHHHHHHHHHTCCGGGTCSSCSSSC
T ss_pred             EEECCCCEEEECCCCCCCCC---------CCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             99179733897655544567---------552599997268756899993799999999999997388652232346778


Q ss_pred             CCCCCCCCCCCCCCCCCC-----------HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCC----------
Q ss_conf             994212243123468899-----------88999999850018999339995212369983113579999----------
Q 002442          360 MPPLFSIAYHQCRWNYRD-----------EEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSF----------  418 (921)
Q Consensus       360 lpP~walG~~q~rw~Y~~-----------~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~~Ftwd~~~F----------  418 (921)
                      |||+||||||||||+|.+           +++|++|+++|++++||||+||+||+||+++++||||+++|          
T Consensus       349 lpP~WalGy~qsR~gY~s~~~~~y~~~~~~~~v~~vv~~~r~~~IPlDvi~lDidymd~~r~FT~D~~~~~~~~~~~~~f  428 (1027)
T 2x2h_A          349 MPPKYVFGFFQGVFGTSSLLRAHMPAGENNISVEEIVEGYQNNNFPFEGLAVDVDMQDNLRVFTTKGEFWTANRVGTGGD  428 (1027)
T ss_dssp             CCCGGGGSCEEEEECCCBSSGGGCCCCTTCCBHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCGGGBTTSSCCCSCC
T ss_pred             CCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCC
T ss_conf             79777741012432445443323344421899999999898729997525973334468776314534375000244568


Q ss_pred             CCHHHHHHHHHHCCCEEEEEECCCCCCC---CCHHHHHHHHHCCCEEECCC-----------C--CCEEEEEECC-----
Q ss_conf             9958999999975992899983888889---98155699887683366699-----------9--9802322089-----
Q 002442          419 PHPEEMQRKLATKGRHMVTIVDPHIKRD---DSYWLHNEATEKGYYVKDAT-----------K--RDYDGWCWPG-----  477 (921)
Q Consensus       419 Pd~~~m~~~L~~~g~k~v~iidP~i~~~---~~y~~~~~~~~~~~~vk~~~-----------g--~~~~g~~WpG-----  477 (921)
                      |||++|+++||++|+|+++|++|+|+.+   ..|.+|+++.++|+|||+.+           |  ++|.|.||||     
T Consensus       429 Pdp~~mv~~Lh~~G~k~v~iidP~i~~~~~~~~y~~~~e~~~~g~fvk~~~~~~~~~~~~~dG~~~~y~g~vWpg~~~~g  508 (1027)
T 2x2h_A          429 PNNRSVFEWAHDKGLVCQTNITCFLRNDNEGQDYEVNQTLRERQLYTKNDSLTGTDFGMTDDGPSDAYIGHLDYGGGVEC  508 (1027)
T ss_dssp             TTSCBHHHHHHHTTCEEEEEECSCEECCCTTCCCHHHHHHHHTTCBCBSCCSSCCCCCCCTTCCTTBCCEEEECSTTCEE
T ss_pred             CCHHHHHHHHHHCCEEEEEEECCEECCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf             99999999998688089997364452487655667788787688488647567655222578987502554325888647


Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCC---C------CCCC------------------
Q ss_conf             631124888668999964101233348768413860589998468996---3------3688------------------
Q 002442          478 SSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPE---V------TMPR------------------  530 (921)
Q Consensus       478 ~~~~~Df~np~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e---~------t~~~------------------  530 (921)
                      .++||||+||++++||.++++.  +. ..+++|+|+|||||++|+...   .      ..+.                  
T Consensus       509 ~~~~pDFtnp~a~~WW~~~~k~--l~-~~GvDg~W~DmnEPs~f~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~y~p~~  585 (1027)
T 2x2h_A          509 DALFPDWGRPDVAEWWGNNYKK--LF-SIGLDFVWQDMTVPAMMPHKIGDDINVKPDGNWPNADDPSNGQYNWKTYHPQV  585 (1027)
T ss_dssp             EEECBCTTSTTHHHHHHHTTHH--HH-TTTCCEEEECSTTTCCCCCBTTSCTTCCCCTTCSBTTBCCTTCBCTTSSCTTC
T ss_pred             CEECCCCCCHHHHHHHHHHHHH--HH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             4246588987899999999999--85-27987899708997534444565445555556545556655543443334443


Q ss_pred             ---CCC--CCCCCCCHHHCHHHHHHHHHHH-HHHHHHHC---CCCCCCEEEECCCCCCCCCCCCEECCCCCCCHHHHHHH
Q ss_conf             ---765--5786210000001245789874-99998610---89999838860244798764501158872544677764
Q 002442          531 ---DAL--HLDRVEHRELHNAYGYYFHMAT-SDGLLKRE---NGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVS  601 (921)
Q Consensus       531 ---d~~--h~~g~~~~~~HN~Yg~~~~~at-~~~l~~~~---~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~s  601 (921)
                         +..  +++...+...||+|++.+.+++ ++|+.++.   .+.+||||||||+|+|+|||+++|+|||.++|++|+.+
T Consensus       586 ~~~~~~~~~~g~~~~~~~~n~~~~~~~~at~~eg~~~~~~~l~~~kRpfilsRs~~aGsqRy~~~WsGDn~s~W~~L~~s  665 (1027)
T 2x2h_A          586 LVTDMRYENHGREPMVTQRNIHAYTLCESTRKEGIVENADTLTKFRRSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMM  665 (1027)
T ss_dssp             EEECSSSTTSCEEEGGGTGGGHHHHHHHHHHHHTTTTTGGGCCSCSCCCEEESCEETTGGGTCEEECCSCCSSHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             34553112467642022667789999999998876643431266763179962324766776654488645645568999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCC--------CCCHHHHHHHHHCCCCCCCCCCCCC-------CCCCCCCCCCCCHHHH
Q ss_conf             999998712699841357789999--------9987689998612532321222488-------9999987400382579
Q 002442          602 VPMILTLGLTGMSFSGADVGGFFG--------NPDTELLVRWYQLGAYYPFFRAHAH-------HDTKRREPWLFGERNT  666 (921)
Q Consensus       602 i~~~l~~~l~Gip~~G~DigGF~g--------~~~~EL~~RW~Q~gaf~P~~R~H~~-------~~~~~~ePw~~~~~~~  666 (921)
                      |+++|++||+|+||||+|||||+|        ++++|||+||+|+|||+|+||+|++       .++.+||||.|+++ .
T Consensus       666 i~~~L~~~lsG~p~~g~DIgGF~g~~~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~~~~~~ePw~~~~~-~  744 (1027)
T 2x2h_A          666 IANNINMNMSCLPLVGSDIGGFTSYDNENQRTPCTGDLMVRYVQAGCLLPWFRNHYDRWIESKDHGKDYQELYMYPNE-M  744 (1027)
T ss_dssp             HHHHHHHHHTTCCSEECCTTCSSCCCSSCTTCCCCHHHHHHHHHHHTTSSSCEEEEEBCBTTBCCSBSCCCGGGCTTT-H
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCH-H
T ss_conf             999998875098702577476677776545689998999999886357710572367655455678876665025738-9


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCEEEECC----CEEEEEEECCCCEEEEEEC
Q ss_conf             99999999999336999999999997699632455446999943224-585253249----5259645516863899983
Q 002442          667 QLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFT-NDEAFMVGN----ALLVQGVYEERAKHISVYL  741 (921)
Q Consensus       667 ~~~r~~i~lRY~LlPY~Ytl~~~a~~~G~Pi~RPL~~~fP~D~~~~~-~~~qfm~G~----~lLVaPV~~~g~~~~~vyl  741 (921)
                      +++|++|++||+||||+||++++||.+|.|||||||+ ||+|++++. +++|||||+    +||||||+++|+++|+|||
T Consensus       745 ~~~r~~i~lRy~LlPYlYtl~~~a~~~G~Pi~RPl~~-fp~D~~~~~~~~~qfm~G~~~G~~lLVaPV~~~g~~~~~vYL  823 (1027)
T 2x2h_A          745 DTLRKFVEFRYRWQEVLYTAMYQNAAFGKPIIKAASM-YNNDSNVRRAQNDHFLLGGHDGYRILCAPVVWENSTERELYL  823 (1027)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHCCCSSEEGGG-SSSCSSHHHHTTTCEEECTTTSCSEEECCCCSTTCCEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC-CCCCHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEE
T ss_conf             9999999999987999999999998649962533234-789877852158569974777788799954037980689997


Q ss_pred             CCCCEEEEEE---CC----EEEECCEEE-EEEEECCCCCEECCCCEEEECCCCCCCC----CCCCCCCCEEEEEEECCCC
Q ss_conf             8984126741---02----498489699-9975348612340699265045787875----1001479718999807995
Q 002442          742 PGKESWYDIR---TG----ARVKGGVTH-KLEVSEESVPAFQRPGTIIPRRDRFRRS----STQMVNDPYTLVVALNSSQ  809 (921)
Q Consensus       742 P~~g~Wyd~~---tg----~~~~gg~~~-~v~apl~~iPvfvR~GsIiP~~~~~~~s----t~~~~~~p~~L~v~~~~~~  809 (921)
                      |+++.|||+|   ++    +.+.||+++ ++++||++||||+|+|+|||++...+.+    +..++.+|++|+|+++.++
T Consensus       824 P~~g~W~d~~~~~~~~~~~~~~~gG~~i~~~~apl~~iPvfvR~GsIiP~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~g  903 (1027)
T 2x2h_A          824 PVLTQWYKFGPDFDTKPLEGAMNGGDRIYNYPVPQSESPIFVREGAILPTRYTLNGENKSLNTYTDEDPLVFEVFPLGNN  903 (1027)
T ss_dssp             CSSSEEEECSGGGGGSCCCCCEETTCEEEEEECCTTCCCEEEETTBEEEEECCTTSCCCCGGGCCTTSCEEEEECSCBTT
T ss_pred             CCCCCEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf             98985686144566872025974983999996576566459867817542354455554433223577459999978999


Q ss_pred             CEEEEEEEECCC-CCC-CCCCEEEEEEEEEEC--CEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEE
Q ss_conf             449999984898-932-379809999999998--9478997137878777787406979999802897608992598403
Q 002442          810 AAEGQLYVDDGK-SFD-FLEGAFIHRRFVFSN--GQLKSINMAPAAGKSRFSSECIIERIILLGHGGSKSAVIEPANQKA  885 (921)
Q Consensus       810 ~a~g~ly~DDG~-s~~-y~~g~~~~~~f~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~i~i~G~~~~~~v~v~~~~~~~  885 (921)
                      .|+|+||+|||+ +++ +++|+|..++|++..  +.+++....   ..+.+. ..+-.+|.|.|...|..|.+.+.....
T Consensus       904 ~a~g~ly~DDG~~~~~~~~~G~y~~~~~~~~~~~~~l~i~~~~---~~~~~~-~~~~~~~~~~~~~~p~~v~v~g~~~~~  979 (1027)
T 2x2h_A          904 RADGMCYLDDGGVTTNAEDNGKFSVVKVAAEQDGGTETITFTN---DCYEYV-FGGPFYVRVRGAQSPSNIHVSSGAGSQ  979 (1027)
T ss_dssp             EEEEEEEECCTTSSSHHHHHCCCEEEEEEEEEETTEEEEEEEE---EEECSC-CCSCEEEEEETCCCCSCEEEECSSCCE
T ss_pred             CEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECC---CCCCCC-CCCCEEEEEECCCCCCEEEECCEECCC
T ss_conf             3778999909984113015886899999999679989999804---667656-776679999457997389988820233


Q ss_pred             E------------E-EECCEEEEEECCCCEEEEECCCCCCCCCEEEEE
Q ss_conf             5------------7-303305777456009999359602388869995
Q 002442          886 E------------I-ELGPLQLQGRHGRTVLTVRNPGVRISDDWTIKI  920 (921)
Q Consensus       886 ~------------~-~~~~~~~~~~~~~~~l~i~~~~~~~~~~w~i~~  920 (921)
                      .            + +.....+.|+.++.++.|+-|... .+|..|.+
T Consensus       980 ~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~vk~~~~~-~~~~~i~~ 1026 (1027)
T 2x2h_A          980 DMKVSSATSRAALFNDGENGDFWVDQETDSLWLKLPNVV-LPDAVITI 1026 (1027)
T ss_dssp             ECEECSCCSHHHHHHTCCTTEEEEETTTTEEEEEECGGG-TTSEEEEE
T ss_pred             CCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCC-CCCEEEEE
T ss_conf             323541023344531477744798389988999848987-77558996


No 7  
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=1.00  E-value=1  Score=1237.09  Aligned_cols=736  Identities=22%  Similarity=0.367  Sum_probs=591.0

Q ss_pred             CEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCEECCCC
Q ss_conf             116884798299998118889999864089999999777899999229999999984102655467743-3321110255
Q 002442           59 NQVTISDDGDISAKLVPKNHDDHHQINPLILSLSIYQDGIVRLKIDEDPTLNPRKQRFQVPDVVLPQFE-SKKLYLQRYS  137 (921)
Q Consensus        59 ~sv~~~~~~~~~a~l~~~~~~~~~~~~~L~l~i~~~~~~~~Rv~I~e~~~~~~~~~Ry~vp~~l~~~~~-~~~~~~~~~~  137 (921)
                      .+.+.+ ++++...+..        .....++|+++.++++||+....+......+.+    ++++.+. ...+.+++. 
T Consensus        47 ~~~~~~-~~~~~~~~~~--------~~~~~~~i~~~~~~~iRv~~~~~~~~~~~~~sl----~~~~~~~~~~~~~v~~~-  112 (1020)
T 2xvl_A           47 AQVERT-AEGVVLTLPE--------GTVKKLRLQVMGERIIRVTALPGTDFGIVPESI----QVVAKPATNVPFSVDQA-  112 (1020)
T ss_dssp             CEEEEC-SSEEEEECSS--------SSCCEEEEEEEETTEEEEEEESSSCGGGSCCCS----SCCCCCCSSCCCEEEEE-
T ss_pred             EEEEEE-CCEEEEEECC--------CCCEEEEEEEECCCEEEEEEECCCCCCCCCCCE----EEECCCCCCCCEEEEEC-
T ss_conf             689990-9999999678--------786399999978997999984688677788650----56347667885089974-


Q ss_pred             CCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC--CC
Q ss_conf             5434688987168507877999994684999999469918999645887211134456202110124347899998--40
Q 002442          138 KETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLNSNGLFDFEEKNEGEEWEERFRGHTDTRPYGP--QS  215 (921)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~i~~~~~g~~v~~~n~~~l~~~e~~~~~~~~~~~f~~~~d~~p~gp--~~  215 (921)
                              +..+.+.+..++++|++++++|.|++. +|++++.-...+  .|..            ...+.+|.|.  -+
T Consensus       113 --------~~~~~~~t~~l~~~v~~~~~~i~f~d~-~g~~ll~e~~~~--~~~~------------~~~~~r~~~~~~~~  169 (1020)
T 2xvl_A          113 --------GEKLVLKTSQVSAEVSLLDGTVSFRDA-KGNVLLQEENRG--TFSP------------VIHDPDPVDADSYA  169 (1020)
T ss_dssp             --------TTEEEEECSSEEEEEETTTCCEEEEET-TSCEEEEBSSSC--EEEC------------CCSCSSCCCTTCEE
T ss_pred             --------CCEEEEEECCEEEEEECCCCEEEEEEC-CCCEEEEECCCC--CCCC------------CCCCCCCCCCCCEE
T ss_conf             --------998999949899999888867999908-998966504567--6552------------21223236887349


Q ss_pred             EEEEEEECCCCCEEECCCC-CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf             6999975699835627998-898888999899987895115411365665799998875522189984789863899993
Q 002442          216 ISFDVSFYDSDYVYGIPER-ATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWL  294 (921)
Q Consensus       216 v~~~~~~~~~~~~yGlgE~-~~~l~l~~~~g~~~~~~~~y~l~n~D~~~y~~~~~~~lYg~iPf~~~~~~~~~~~Gvf~~  294 (921)
                      +...|..+.+|++|||||| .+.|++|         |+.+.|||.|           +|.+|||++|.+    +|||||+
T Consensus       170 ~~~~f~~~~dE~~yGlGq~q~g~ln~r---------G~~~~l~~~n-----------~~~siPf~~s~~----~YGilwd  225 (1020)
T 2xvl_A          170 LRQEFNRGSDEGFFGLGQHQNGQVNYA---------GENVELTTYN-----------LVISIPFLVSSR----NYGLLWD  225 (1020)
T ss_dssp             EEEEECTTCCCCEEEEEECSSCCSSCT---------TSCEEECCBT-----------TBEEEEEEEESS----SEEEEEC
T ss_pred             EEEEEECCCCCCEECCCCCCCCCCCCC---------CCEEEEEECC-----------CCCCEEEEECCC----CEEEEEE
T ss_conf             999980799981687876877756558---------9888868668-----------775161899278----5899995


Q ss_pred             CCCCEEEEE--CCC------------CC---------------------------------------CCCCCC-------
Q ss_conf             486249998--278------------87---------------------------------------766554-------
Q 002442          295 NAAEMQIDV--LGD------------GW---------------------------------------NAESGI-------  314 (921)
Q Consensus       295 n~~~~~vd~--~~~------------~~---------------------------------------~~~~~~-------  314 (921)
                      |++.+.|..  ...            |-                                       .+..++       
T Consensus       226 n~~~~~f~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~  305 (1020)
T 2xvl_A          226 NNSITRFGDPREAQPLNQSLKLYDAEGKEGGLTVRYFVGDELKLTRVEADFNHQFYKQGNELENPFPEEVAGAYKNNTLR  305 (1020)
T ss_dssp             CCSCEEESCCSCCEETTSSEEEECTTSCBTSEEEEEEETTEEEEEEEESSCEECCEEETTEESSCCCTTTHHHHHTTCEE
T ss_pred             CCCCEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf             89745983574310222100101457874623678851786047850112333343203222576444456666565404


Q ss_pred             ----------------------------------------------------------------------------CCCC
Q ss_conf             ----------------------------------------------------------------------------4677
Q 002442          315 ----------------------------------------------------------------------------LLPS  318 (921)
Q Consensus       315 ----------------------------------------------------------------------------~~~~  318 (921)
                                                                                                  ..|.
T Consensus       306 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~p~  385 (1020)
T 2xvl_A          306 IELEGSIEAQATGKHQFKMYNSGYAQLSLDGEVVLDRWRMNWNPWYHNFYRELNAGDKHKLKVSWKPDGGFFHLRHLDPL  385 (1020)
T ss_dssp             EEEEEEEEESSCEEEEEEEEESEEEEEEETTEEEEEEEECTTSCEEEEEEEEECTTCEEEEEEEEECTTCCEEEEEECCC
T ss_pred             EEEEEEEECCCCCEEEEEEECCCEEEEEECCEEHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCC
T ss_conf             89999973278860899971366049988887612334312799863021101137537899997158753555315766


Q ss_pred             -CCCCCCEEEEEE-CCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCE
Q ss_conf             -666321499720-472899999479978999999870299999942122431234688998899999985001899933
Q 002442          319 -KQKRIDTFWMSE-AGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYD  396 (921)
Q Consensus       319 -~~~~~~~~~~s~-~G~lD~y~f~G~~p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~IP~D  396 (921)
                       ......++|.++ +|.||+|||.||+|++|+++|++|||+|+|||+||||||||||+|.++++|++++++|++++||||
T Consensus       386 ~~~~~~~~~~~s~~gg~lDyy~~~G~tp~~Vv~~Yt~LTGrp~mpP~WalG~wqsr~~Y~sq~ev~~va~~~re~gIPlD  465 (1020)
T 2xvl_A          386 PANEQHELSLASETGKAIDYYFVAGDTKDDIISGYRQLTGKSVMLPKWAYGFWQSRERYKSSDEIIQNLKEYRDRKIPID  465 (1020)
T ss_dssp             CGGGSSSEEEEEEEESSEEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSEEECCTTCCSHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEECEEEECCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             66678618999916997799999699999999999998688889986441415531778999999999999998099844


Q ss_pred             EEEEECCCCC--CCCCEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEE
Q ss_conf             9995212369--98311357999999589999999759928999838888899815569988768336669999802322
Q 002442          397 VLWLDIEHTD--GKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWC  474 (921)
Q Consensus       397 ~iwlDi~~~~--~~~~Ftwd~~~FPd~~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~  474 (921)
                      ++|+|++||+  ++++||||+++||||++|+++||++|+|+++|++|+|..+  ++.|+++.++|+++++..+..+.+||
T Consensus       466 vi~lD~~y~~~~~~~dFtwD~~rFPdp~~mv~~Lh~~G~k~vl~V~P~I~~~--s~~Y~e~~~~G~~v~~~~~~~~~~w~  543 (1020)
T 2xvl_A          466 NIVLDWSYWPEDAWGSHDFDKQFFPDPKALVDKVHAMNAQIMISVWPKFYPT--TDNYKELNAKGFMFNRNLDEKNLDWI  543 (1020)
T ss_dssp             EEEECSCCSCTTCTTSCCCCTTTCSCHHHHHHHHHHTTCEEEEEECSEECTT--SHHHHHHHHTTCEETHHHHTTCCCSS
T ss_pred             EEEEECCCCCCCCCCCEEECHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCC--CHHHHHHHHCCCEEECCCCCCCCCCC
T ss_conf             6999552026576664487855678989999999988998999979854899--66689998689799747787445443


Q ss_pred             ECCC--CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHCHHHHHH
Q ss_conf             0896--31124888668999964101233348768413860589998468996336--8876557862100000012457
Q 002442          475 WPGS--SSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTM--PRDALHLDRVEHRELHNAYGYY  550 (921)
Q Consensus       475 WpG~--~~~~Df~np~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~--~~d~~h~~g~~~~~~HN~Yg~~  550 (921)
                      |||.  +++ ||+||++++||.+.+... +. ..+++++|+|||||++|.+.+...  +.+...+.| .|+++||+||++
T Consensus       544 wpG~~~~v~-DftNPear~~ww~~l~~~-l~-~~GiDg~W~DmnEps~~~~~d~~~~~~l~~~~~~G-~~~~vhNlY~~~  619 (1020)
T 2xvl_A          544 GKGYLNAFY-DPFSPEATAIFWKQIRDK-IN-VHGFDAWWLDAVEPDIHSNLTFEKRKWLMTPNARG-NGAEIFNAYAVP  619 (1020)
T ss_dssp             TTCCCCEEE-CTTSHHHHHHHHHHHHHH-TG-GGTCCEEEECCTTTCSSTTBCHHHHHHTTCSBTTB-CGGGGTTCTHHH
T ss_pred             CCCCCCEEE-CCCCHHHHHHHHHHHHHH-HH-HCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHCCHHHHH
T ss_conf             799874150-899949999999999887-63-26885899558886556777854442456755678-566633235678


Q ss_pred             HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC-EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-----
Q ss_conf             89874999986108999983886024479876450-115887254467776499999871269984135778999-----
Q 002442          551 FHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFF-----  624 (921)
Q Consensus       551 ~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~-~WtGDn~s~W~~L~~si~~~l~~~l~Gip~~G~DigGF~-----  624 (921)
                      +++|++++++++. +++|||+||||+|+|+|||++ +|+|||.++|++|+.+|+++|++||+|+||||+|||||+     
T Consensus       620 ~~~atye~l~~~~-~~kRpfilsRS~~aGsQRy~~~~WsGDn~ssW~~L~~sI~~~L~~glsGip~~g~DIGGF~~~~~y  698 (1020)
T 2xvl_A          620 HAEGVYQGELATD-GDKRSFILTRSGFGGIQRTGSAIWSGDIVSRWSDMKDQIAAGIGTNLAGVTNWTFDIGGFTPEDRF  698 (1020)
T ss_dssp             HHHHHHHHHHHHC-TTSCCCEEESCCCTTGGGGTEEEECCSCBSSHHHHHHHHHHHHHHHHTTCCCEECCBTCSBCCHHH
T ss_pred             HHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
T ss_conf             8999999999745-798538999166687776760165786675299999999999987530886230465877543344


Q ss_pred             --------------CCCC----HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH---HHHHHHHHHHHHHHHHHHH
Q ss_conf             --------------9998----768999861253232122248899999874003825---7999999999999336999
Q 002442          625 --------------GNPD----TELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGER---NTQLIREAIHVRYMFLPYF  683 (921)
Q Consensus       625 --------------g~~~----~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~---~~~~~r~~i~lRY~LlPY~  683 (921)
                                    |+++    +|||+||+|+|||+|+||+|++.  .+||||.|+++   +.+++|+++++||+||||+
T Consensus       699 ~~~~~~~~~~~~g~g~~d~~~~~EL~~RW~Q~GaF~P~~R~H~~~--~~~EPW~f~~eg~~~~~~~r~~i~lRY~LlPYl  776 (1020)
T 2xvl_A          699 RHGKKGFVGSWTALDAEQVDEWQELNTRWYQFGAFVPLYRSHGQN--PYREIFNIADEGTEVYNAMVWYTKLRYYLMPYI  776 (1020)
T ss_dssp             HEETTEECSSGGGSCGGGHHHHHHHHHHHHHHHTTSSSEEECCSS--SCCSHHHHSCTTSHHHHHHHHHHHHHHHTHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCC--CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             433333333334567777888989999998874278877542588--875313306765789999999999999889999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCE-EEEEECCEEEECCEEE
Q ss_conf             999999997699632455446999943224585253249525964551686389998389841-2674102498489699
Q 002442          684 YTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKES-WYDIRTGARVKGGVTH  762 (921)
Q Consensus       684 Ytl~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~-Wyd~~tg~~~~gg~~~  762 (921)
                      ||++++||.+|.|||||||++||+|++++++++|||+|++||||||+++|+++|+|||| +|. |||+||++.++||+++
T Consensus       777 Ytl~~~a~~~G~Pi~RPL~~efP~D~~~~~i~dQfm~G~~LLVAPV~e~g~~~r~VYLP-~G~~WyD~~Tg~~~~GG~~i  855 (1020)
T 2xvl_A          777 YTLGGDTYHKDGTIMRGLVMDFPNDRKAWDINTQYMFGPAFLVNPVYEYKARSRDVYLP-AGSDWYNFYTGEKLAGGQTI  855 (1020)
T ss_dssp             HHHHHHHHHTCCCSEECHHHHCTTCHHHHHCCSCEEETTTEEECCCCSTTCSEEEEEEC-TTSCEEETTTCCEECSSEEE
T ss_pred             HHHHHHHHHHCCCCEEHHHCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECC-CCCCEEECCCCCEEECCEEE
T ss_conf             99999999759972102111378986784458720058986999882379856999907-99850776899498799899


Q ss_pred             EEEEECCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCEE
Q ss_conf             99753486123406992650457878751001479718999807995449999984898932379809999999998947
Q 002442          763 KLEVSEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSSQAAEGQLYVDDGKSFDFLEGAFIHRRFVFSNGQL  842 (921)
Q Consensus       763 ~v~apl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~~~a~g~ly~DDG~s~~y~~g~~~~~~f~~~~~~l  842 (921)
                      ++++||++||||+|+|+|||+++.. +++.+++.+|++|+|+++.  .++|+||+|||+|++|++|+|..++|+++++..
T Consensus       856 ~v~apLd~iPvfvR~GsIIP~~~~~-~~t~~~~~~~l~l~V~~~~--~~~~~LYeDDG~s~~ye~g~y~~~~~~~~~~~~  932 (1020)
T 2xvl_A          856 TADAPLARVPLFVKAGAIVPTGPLI-QHVDEGLNSPLLITVYTGA--NGSFDIYEDDGRSLKYQQGEWSRIPLSYDDVTG  932 (1020)
T ss_dssp             EEECCTTCCCEEEETTCEEEECCCC-SSGGGGTTCCEEEEEECSS--CEEEEEEECCSSSSGGGGTBEEEEEEEEETTTT
T ss_pred             EEECCCCCCCEEEECCCEEEECCCC-CCCCCCCCCCEEEEEECCC--CCEEEEEECCCCCCCCCCCCEEEEEEEEECCCC
T ss_conf             9977855474486578474316876-6553357875499997079--836999977997234458858999999989845


Q ss_pred             EEEEECCCCCCCCCC--CCEEEEEEEEEECC
Q ss_conf             899713787877778--74069799998028
Q 002442          843 KSINMAPAAGKSRFS--SECIIERIILLGHG  871 (921)
Q Consensus       843 ~~~~~~~~~~~~~~~--~~~~~~~i~i~G~~  871 (921)
                      +.+.. .  ..|.|.  ...+..+|+++|-.
T Consensus       933 ~lti~-~--~~G~y~g~~~~r~~~v~~~~~~  960 (1020)
T 2xvl_A          933 TLIIG-D--RVGSFTGMADERNIRVRFIAGP  960 (1020)
T ss_dssp             EEEEC-C--CEEECTTCCSCEEEEEEEECSC
T ss_pred             EEEEE-E--CCCCCCCCCCCCEEEEEEECCC
T ss_conf             89996-3--5777667765517999997898


No 8  
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=1.00  E-value=1  Score=1234.92  Aligned_cols=602  Identities=29%  Similarity=0.558  Sum_probs=536.8

Q ss_pred             CEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
Q ss_conf             06999975699835627998898888999899987895115411365665799998875522189984789863899993
Q 002442          215 SISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWL  294 (921)
Q Consensus       215 ~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~y~~~~~~~lYg~iPf~~~~~~~~~~~Gvf~~  294 (921)
                      .+.+.+.++.++++||||||++.|+++         +++++|||+|+++|..+ .+++|++|||+++++ ++.++||||+
T Consensus        51 ~~~~~~~~~~~e~~yGlGE~~~~l~~~---------g~~~~l~n~D~~~~~~~-~~~lY~~iPf~~~~~-~~~~~Gvf~~  119 (693)
T 2g3m_A           51 KVIVEKSLDLKEHIIGLGEKAFELDRK---------RKRYVMYNVDAGAYKKY-QDPLYVSIPLFISVK-DGVATGYFFN  119 (693)
T ss_dssp             EEEEEEECCTTCEEEECSSCSSCSSCC---------SEEEEECCCCCCSCCTT-CCCCSEECCEEEEEE-TTEEEEEEEC
T ss_pred             EEEEEEECCCCCCEEECCCCCCCCCCC---------CCEEEEEECCCCCCCCC-CCCCCCCEEEEEEEC-CCCEEEEEEE
T ss_conf             799999848998589378879886879---------97888686477766878-766545142799971-6998999995


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             48624999827887766554467766632149972047289999947997899999987029999994212243123468
Q 002442          295 NAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWN  374 (921)
Q Consensus       295 n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~  374 (921)
                      |++.++||+..+              ....++|.+++|.||+|||.||+|++|+++|++|||+|+|||+||||||||||+
T Consensus       120 n~~~~~~d~~~~--------------~~~~~~~~~~~g~lD~y~~~G~~~~~v~~~Y~~ltG~p~~pP~WalG~~qsr~~  185 (693)
T 2g3m_A          120 SASKVIFDVGLE--------------EYDKVIVTIPEDSVEFYVIEGPRIEDVLEKYTELTGKPFLPPMWAFGYMISRYS  185 (693)
T ss_dssp             CCSCEEEEESSS--------------STTEEEEEESSSCEEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSEEEEETT
T ss_pred             CCCCEEEEEECC--------------CCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             798439997023--------------586699998799779999968999999999999769998996020375435876


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf             89988999999850018999339995212369983113579999995899999997599289998388888998155699
Q 002442          375 YRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNE  454 (921)
Q Consensus       375 Y~~~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~~Ftwd~~~FPd~~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~  454 (921)
                      |.++++|++++++|++++||||++|+|++||+++++||||+++||||++|+++||++|+|+++|++|+|+.+++|.+|++
T Consensus       186 y~~~~ev~~v~~~~~~~~IP~dvi~lD~~y~~~~~dft~d~~~FPdp~~mv~~Lh~~G~k~~l~i~P~I~~~~~y~~y~e  265 (693)
T 2g3m_A          186 YYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPEPKKLIDELHKRNVKLITIVDHGIRVDQNYSPFLS  265 (693)
T ss_dssp             CCSHHHHHHHHHHHHHTTCCEEEEEECGGGSBTTBTTCCCTTTCSCHHHHHHHHHHTTCEEEEEECSCEECCTTCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCEEEEECCEECCCCCCEECHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHH
T ss_conf             88999999999999972998546998466006886303774458998999999997898899995676467887399999


Q ss_pred             HHHCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCC--C-------
Q ss_conf             8876833666999980232208963112488866899996410123334876841386058999846899--6-------
Q 002442          455 ATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGP--E-------  525 (921)
Q Consensus       455 ~~~~~~~vk~~~g~~~~g~~WpG~~~~~Df~np~a~~Ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~--e-------  525 (921)
                      +.+  +|||+++|+++.|.||||.+++|||+||+|++||.++++.  +. ..+++|+|+|||||++|+.+  +       
T Consensus       266 ~~~--~fvk~~~G~~~~g~~W~g~~~~~Dftnp~a~~ww~~~~~~--l~-~~GiDg~w~DmnEp~~f~~~~~~~~~~~~~  340 (693)
T 2g3m_A          266 GMG--KFCEIESGELFVGKMWPGTTVYPDFFREDTREWWAGLISE--WL-SQGVDGIWLDMNEPTDFSRAIEIRDVLSSL  340 (693)
T ss_dssp             HTT--SBCEETTSSBCEEEETTEEEECBCTTSHHHHHHHHHHHHH--HH-TTTCCEEEECSTTTCCCHHHHHHHHHHTTS
T ss_pred             HHH--HEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHH--HH-HCCCCEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf             875--5189899998787747997450289998999999999999--87-369748997168754346654433333577


Q ss_pred             ----------CCCCCCCCCCC-C--CCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECCCCC
Q ss_conf             ----------33688765578-6--2100000012457898749999861089999838860244798764501158872
Q 002442          526 ----------VTMPRDALHLD-R--VEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNT  592 (921)
Q Consensus       526 ----------~t~~~d~~h~~-g--~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~  592 (921)
                                .++|.|++|+. |  ..|+++||+||+++++|++++++++. + +|||+||||+|+|+|||+++|+|||.
T Consensus       341 p~~~~~~~~~~t~p~d~~~~~~g~~~~~~~~hN~Y~~~~~~a~~e~l~~~~-~-~RpfilsRS~~aGsqry~~~W~GD~~  418 (693)
T 2g3m_A          341 PVQFRDDRLVTTFPDNVVHYLRGKRVKHEKVRNAYPLYEAMATFKGFRTSH-R-NEIFILSRAGYAGIQRYAFIWTGDNT  418 (693)
T ss_dssp             CSCBCCCGGGGSCCTTEEEEETTEEEEHHHHGGGHHHHHHHHHHHHHHHTT-C-CSCCEEESCEETTGGGTCEEECCSCC
T ss_pred             CCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-C-CCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf             533356533355675304636787465888621356899999999999617-8-87479982545888887423599853


Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC------CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             5446777649999987126998413577899999------9876899986125323212224889999987400382579
Q 002442          593 AEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN------PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNT  666 (921)
Q Consensus       593 s~W~~L~~si~~~l~~~l~Gip~~G~DigGF~g~------~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~  666 (921)
                      ++|++|+.+|+++|++||+|+||||+|||||.|+      +++|||+||+|+|||+|+||+|++.++.+||||.|++++.
T Consensus       419 s~W~~L~~~i~~~L~~~l~G~p~~g~DIGGF~g~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~ePw~~~~~~~  498 (693)
T 2g3m_A          419 PSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSHKATDGIDTEPVFLPDYYK  498 (693)
T ss_dssp             CSHHHHHHHHHHHHHHHTTTCCSEECEETCSCCSSSSCCCCCHHHHHHHHHHTTTCSCEEECCCTTSCCCCGGGSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCEECCHHHH
T ss_conf             57999999999999998629983567778887877667899989999999873465221503599998876745285899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCE
Q ss_conf             99999999999336999999999997699632455446999943224585253249525964551686389998389841
Q 002442          667 QLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKES  746 (921)
Q Consensus       667 ~~~r~~i~lRY~LlPY~Ytl~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~  746 (921)
                      +++|+++++||+||||+||++++||.+|.|||||||++||+|++++++++|||+|++||||||+++| ++|+|||| +|.
T Consensus       499 ~~~r~~i~lRy~LlPYlYtl~~~a~~~G~Pi~RPL~~~fP~D~~~~~i~~Qfm~G~~lLVaPV~~~g-~~r~vYLP-~g~  576 (693)
T 2g3m_A          499 EKVKEIVELRYKFLPYIYSLALEASEKGHPVIRPLFYEFQDDDDMYRIEDEYMVGKYLLYAPIVSKE-ESRLVTLP-RGK  576 (693)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSEECHHHHCTTCGGGGGCCSCEEETTTEEECCCCSSS-SSCEEEEC-SSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCHHHHCCCCEEECCCCEEEEEEECCC-CEEEEECC-CCE
T ss_conf             9999999999987999999999998769963201103479986784569717607974998640179-67999979-972


Q ss_pred             EEEEECCEEEECCEEEEEEEECCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC
Q ss_conf             26741024984896999975348612340699265045787875100147971899980799544999998489893237
Q 002442          747 WYDIRTGARVKGGVTHKLEVSEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALNSSQAAEGQLYVDDGKSFDFL  826 (921)
Q Consensus       747 Wyd~~tg~~~~gg~~~~v~apl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~~~~~a~g~ly~DDG~s~~y~  826 (921)
                      |||+|||+.++||+++++++   +||||+|+|+|||+++.             +|+|+++    |+|+||+||       
T Consensus       577 W~d~~tg~~~~Gg~~i~~~a---~iPvfvR~GsIiP~~~~-------------~l~v~~~----~~~~ly~Dd-------  629 (693)
T 2g3m_A          577 WYNYWNGEIINGKSVVKSTH---ELPIYLREGSIIPLEGD-------------ELIVYGE----TSFKRYDNA-------  629 (693)
T ss_dssp             EEETTTCCEEESSEEEECCS---SSCEEEESSEEEEEGGG-------------EEEEESS----EEEECTTSC-------
T ss_pred             EEECCCCCEEECCEEEEEEE---EEEEEEECCEEEECCCC-------------EEEEEEC----CEEEEEECC-------
T ss_conf             89888998997999999986---88799989979453789-------------8999908----789999578-------


Q ss_pred             CCEEEEEEEEEECCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEEEECCEEEEEECCCCEEEE
Q ss_conf             9809999999998947899713787877778740697999980289760899259840357303305777456009999
Q 002442          827 EGAFIHRRFVFSNGQLKSINMAPAAGKSRFSSECIIERIILLGHGGSKSAVIEPANQKAEIELGPLQLQGRHGRTVLTV  905 (921)
Q Consensus       827 ~g~~~~~~f~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~i~G~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~l~i  905 (921)
                             .++.+++.+++.        +.    ....+|++++...|.+|++  ||+++       .+.++.....|+|
T Consensus       630 -------~~~~~~~~~~i~--------~~----~~~~~~~~~~~~~p~~v~v--ng~~~-------~~~~~~~~~~~~~  680 (693)
T 2g3m_A          630 -------EITSSSNEIKFS--------RE----IYVSKLTITSEKPVSKIIV--DDSKE-------IQVEKTMQNTYVA  680 (693)
T ss_dssp             -------EEEECSSEEEES--------SC----EEEEEEEEECSSCCCEEEE--TTSCE-------EECEEEETTEEEE
T ss_pred             -------EEEECCCEEEEE--------EE----EEEEEEEECCCCCCEEEEE--CCEEE-------EEEECCCCCEEEE
T ss_conf             -------268229989998--------61----1168999858899469999--99890-------2266167867999


No 9  
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=1.00  E-value=1  Score=1227.91  Aligned_cols=710  Identities=21%  Similarity=0.364  Sum_probs=596.4

Q ss_pred             CCCCCCCCCCCCEEEECEEEECCCCCEEEEEE-CCCCC--CCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf             01245899998528731168847982999981-18889--9998640899999997778999992299999999841026
Q 002442           43 CKRARSRNPFSCSLIANQVTISDDGDISAKLV-PKNHD--DHHQINPLILSLSIYQDGIVRLKIDEDPTLNPRKQRFQVP  119 (921)
Q Consensus        43 C~R~R~~~~~~y~~~~~sv~~~~~~~~~a~l~-~~~~~--~~~~~~~L~l~i~~~~~~~~Rv~I~e~~~~~~~~~Ry~vp  119 (921)
                      ||..|.--...|...+.++++. ++.+++.+. +....  ...+...+.++|+.+.++++||++++........++|+++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~iiRv~~~~~~~~~~~~~~~~~~   85 (773)
T 2f2h_A            7 NWLIQPGLNLIHPLQVFEVEQQ-DNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLN   85 (773)
T ss_dssp             TTEECTTEEEECCCEEEEEEEE-TTEEEEEEESSCCSSGGGSSSSCCEEEEEECSSTTEEEEEEESCTTSCCCCCCCCCC
T ss_pred             EEECCCCEEECCCCEEEEEEEE-CCEEEEEEEEEEEECCCEECCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEC
T ss_conf             0004788201475205899995-999999996467305731314674899999966997999997588877778963524


Q ss_pred             CCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCEEEEEEE-CCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHH
Q ss_conf             5546774333211102555434688987168507877999994-684999999469918999645887211134456202
Q 002442          120 DVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRH-DPFEVYVRYKGGNSRVLSLNSNGLFDFEEKNEGEEW  198 (921)
Q Consensus       120 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~-~PF~i~i~~~~~g~~v~~~n~~~l~~~e~~~~~~~~  198 (921)
                      ..  +.   ....+...         +..+.+.+.+++++|++ +||+|+|++  +|++++..+.+.+..++..      
T Consensus        86 ~~--~~---~~~~~~~~---------~~~~~i~t~~l~v~i~~~~p~~i~~~~--~g~~l~~~~~~~~~~~~~~------  143 (773)
T 2f2h_A           86 IL--QD---VKVTIENT---------ERYAEFKSGNLSARVSKGEFWSLDFLR--NGERITGSQVKNNGYVQDT------  143 (773)
T ss_dssp             CC--SC---CCEEEEEC---------SSEEEEEETTEEEEEECSSSCEEEEEE--TTEEEEEEETTSEEEEEET------
T ss_pred             CC--CC---CCEEEEEC---------CCEEEEEECCEEEEEECCCCEEEEEEE--CCEEEEEECCCCCCEEECC------
T ss_conf             77--78---86189964---------998999979999999848982899998--9979997158663215716------


Q ss_pred             HHHHCCCCCCCCCCC-CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEE
Q ss_conf             110124347899998-4069999756998356279988988889998999878951154113656657999988755221
Q 002442          199 EERFRGHTDTRPYGP-QSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIP  277 (921)
Q Consensus       199 ~~~f~~~~d~~p~gp-~~v~~~~~~~~~~~~yGlgE~~~~l~l~~~~g~~~~~~~~y~l~n~D~~~y~~~~~~~lYg~iP  277 (921)
                                  .|. ..+...+++..+|++||||||+++|+++         |++++|||+|..    .+..++|++||
T Consensus       144 ------------~~~~~~~~~~~~l~~~e~~YGlGE~~~~~~~~---------g~~~~l~n~d~~----~~~~~lY~~iP  198 (773)
T 2f2h_A          144 ------------NNQRNYMFERLDLGVGETVYGLGERFTALVRN---------GQTVETWNRDGG----TSTEQAYKNIP  198 (773)
T ss_dssp             ------------TTTEEEEEEEEECCTTCCEEEEEECCSCSSCT---------TEEEECCCCCCT----TSBSCCSEEEE
T ss_pred             ------------CCCEEEEEEEEECCCCCEEEECCCCCCCCCCC---------CCEEEEEECCCC----CCCCCCCCEEE
T ss_conf             ------------88705999999738997289788777860339---------968887866888----88766732389


Q ss_pred             EEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCHHHHHHHHHHCCCC
Q ss_conf             89984789863899993486249998278877665544677666321499720472899999479978999999870299
Q 002442          278 FMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGM  357 (921)
Q Consensus       278 f~~~~~~~~~~~Gvf~~n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~~p~~vi~~Y~~ltG~  357 (921)
                      ||++++    ++||||+|++.+.|++..+              ....++|.+++|.||+|||.||+|++|+++|++|||+
T Consensus       199 f~~s~~----g~Gvf~~n~~~~~~d~~~~--------------~~~~~~~~~~~~~ldyy~~~G~~p~~v~~~Y~~LtG~  260 (773)
T 2f2h_A          199 FYMTNR----GYGVLVNHPQCVSFEVGSE--------------KVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGR  260 (773)
T ss_dssp             EEEETT----SEEEEECCSSCCEEEESSS--------------BTTEEEEEEESSEEEEEEEECSSHHHHHHHHHHHHCC
T ss_pred             EEEECC----EEEEEEECCCCEEEEEEEC--------------CCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHCC
T ss_conf             999797----8999995798549998412--------------5754999982686899999599999999999987324


Q ss_pred             CCCCCCCCCCCCCCCC---CCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC--CEEECCCCCCCHHHHHHHHHHCC
Q ss_conf             9999421224312346---889988999999850018999339995212369983--11357999999589999999759
Q 002442          358 PSMPPLFSIAYHQCRW---NYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKK--YFTWDRLSFPHPEEMQRKLATKG  432 (921)
Q Consensus       358 p~lpP~walG~~q~rw---~Y~~~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~--~Ftwd~~~FPd~~~m~~~L~~~g  432 (921)
                      |+|||+|||||||||+   +| ++++|++++++|++++||+|++|+|++||++++  +||||+++||||++|+++||++|
T Consensus       261 p~lpP~walG~w~s~~y~~~y-~e~~v~~v~~~~r~~~IP~dvi~lD~~w~~~~~w~dft~d~~~FPdp~~mv~~Lh~~G  339 (773)
T 2f2h_A          261 PALPPAWSFGLWLTTSFTTNY-DEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKG  339 (773)
T ss_dssp             CCCCCGGGGSEEEECCSSSCC-CHHHHHHHHHHHHHTTCCCCEEEECGGGBCTTCCSSCCBCTTTCSCHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCEEECCCCCCC-CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHCC
T ss_conf             456873335868730234789-9999999999998739984699977653466666641477322899899999999789


Q ss_pred             CEEEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
Q ss_conf             92899983888889981556998876833666999980232208963112488866899996410123334876841386
Q 002442          433 RHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIW  512 (921)
Q Consensus       433 ~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Df~np~a~~Ww~~~~~~~~~~g~~~~~~~W  512 (921)
                      +|+++|++|+|+.++  ++|+++.++|+|||+++|+++.+.||||.++++||+||+|++||.++++...   ..+++++|
T Consensus       340 ~k~~l~i~P~I~~~s--~~y~e~~~~g~~vk~~~G~~~~~~~w~g~~~~~DftnP~a~~ww~~~~~~l~---d~Gvd~~w  414 (773)
T 2f2h_A          340 LKICVWINPYIGQKS--PVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLV---AMGVDCFK  414 (773)
T ss_dssp             CEEEEEECSEECTTS--TTHHHHHHHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHH---HTTCCEEE
T ss_pred             CEEEEEECCCCCCCC--HHHHHHHHCCCEEECCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHH---HCCCCEEE
T ss_conf             989998468707887--8999998789266889998304111079845668989899999999999998---65998897


Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEECCCCC
Q ss_conf             05899984689963368876557862100000012457898749999861089999838860244798764501158872
Q 002442          513 NDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNT  592 (921)
Q Consensus       513 ~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~  592 (921)
                      +||||+         +|.|..+++|..|+++||+|+++++++++++++++. +++|||+||||+|+|+|||+++|+|||.
T Consensus       415 ~D~~e~---------~p~d~~~~~g~~~~~~hN~y~~~~~~a~~e~l~~~~-~~~rp~ilsRS~~aGsqRy~~~WsGDn~  484 (773)
T 2f2h_A          415 TDFGER---------IPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTV-GEEEAVLFARSASVGAQKFPVHWGGDCY  484 (773)
T ss_dssp             ECCCCC---------CCSSSBCTTCCCHHHHHHHHHHHHHHHHHHHHHTTT-CGGGCCEEESCBCTTGGGSCCEECCCCC
T ss_pred             CCCCCC---------CCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCCCCCCEEECCCCC
T ss_conf             567898---------875514448998788423667999999999999962-8988358861446766788607599775


Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             54467776499999871269984135778999999876899986125323212224889999987400382579999999
Q 002442          593 AEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREA  672 (921)
Q Consensus       593 s~W~~L~~si~~~l~~~l~Gip~~G~DigGF~g~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~  672 (921)
                      ++|++|+.+|+++|++|++|+||||+|||||.|++++|||+||+|+|||+|+||+|++.  ..||||.|++++.+++|++
T Consensus       485 s~W~~L~~si~~~L~~~lsG~p~~g~DIGGF~g~~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~ePw~~~~~~~~~~r~~  562 (773)
T 2f2h_A          485 ANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDDESCDVVRFF  562 (773)
T ss_dssp             SSHHHHHHHHHHHHHHHTTTCCCEEEETTCSSSCCCHHHHHHHHHHHHTSSEEEECCSS--SCCCGGGTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCC--CCCCCCCCCHHHHHHHHHH
T ss_conf             45999999999998633138862468768868989989999888764077756335698--8858704158999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEEEC
Q ss_conf             99999336999999999997699632455446999943224585253249525964551686389998389841267410
Q 002442          673 IHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRT  752 (921)
Q Consensus       673 i~lRY~LlPY~Ytl~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~qfm~G~~lLVaPV~~~g~~~~~vylP~~g~Wyd~~t  752 (921)
                      +++||+||||+||++++||.+|.|||||||++||+|++++++++|||+|++||||||++++. +++|||| +|.|||+||
T Consensus       563 i~lRy~LlPYlYtl~~~a~~~G~Pi~RPL~~~fP~D~~~~~i~~Qfm~G~~lLVaPV~~~~~-~~~vYLP-~g~W~d~~t  640 (773)
T 2f2h_A          563 TQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAG-DVQFYLP-EGRWTHLWH  640 (773)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCSEECHHHHSTTCGGGTTCCSCEEETTTEEECCCCSSSC-EEEEEEC-SSEEEETTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEECHHHCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCC-EEEEECC-CCEEEECCC
T ss_conf             99999999999999999986599503131035789867845498430077669941014685-5999989-984898899


Q ss_pred             CEEEECCEEEEEEEECCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEC-CCCCEEEEEEEECCCCCCCCCCEEE
Q ss_conf             249848969999753486123406992650457878751001479718999807-9954499999848989323798099
Q 002442          753 GARVKGGVTHKLEVSEESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVVALN-SSQAAEGQLYVDDGKSFDFLEGAFI  831 (921)
Q Consensus       753 g~~~~gg~~~~v~apl~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~v~~~-~~~~a~g~ly~DDG~s~~y~~g~~~  831 (921)
                      |+.++||+++++++||++||||+|+|+|||++++.+ .+.....++++|.|++. .++.|+++||+|||+|.       .
T Consensus       641 g~~~~Gg~~i~~~~pl~~iPvfvR~GsIiP~~~~~~-~~~~~~~~~l~l~vy~~~~~~~~~~~ly~DdG~~~-------~  712 (773)
T 2f2h_A          641 NDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQ-RPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVI-------F  712 (773)
T ss_dssp             CCEEECSEEEEEECCTTCCCEEECSSEEEEECSCSS-CSCSCTTBSCEEEEECCCTTCEEEEEEECTTSCEE-------E
T ss_pred             CCEEECCEEEEEECCCCCCCEEEECCCEEEECCCCC-CCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCEE-------E
T ss_conf             979979989999788533767998892876356123-66656888669999976899879999990899689-------9


Q ss_pred             EEEEEEECCEEEEEE
Q ss_conf             999999989478997
Q 002442          832 HRRFVFSNGQLKSIN  846 (921)
Q Consensus       832 ~~~f~~~~~~l~~~~  846 (921)
                      ..+...+++.++...
T Consensus       713 ~~~~~~~~~~~~v~~  727 (773)
T 2f2h_A          713 TLKAARTGNTITVTG  727 (773)
T ss_dssp             EEEEEEETTEEEEEE
T ss_pred             EEEEEEECCEEEEEE
T ss_conf             999999799999998


No 10 
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=1.00  E-value=1  Score=224.63  Aligned_cols=273  Identities=16%  Similarity=0.187  Sum_probs=194.7

Q ss_pred             EEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEC---------CEEEEEEEECCCHHHHHH
Q ss_conf             99847898638999934862499982788776655446776663214997204---------728999994799789999
Q 002442          279 MISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEA---------GIVDTFFFVGPGPKDVVR  349 (921)
Q Consensus       279 ~~~~~~~~~~~Gvf~~n~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---------G~lD~y~f~G~~p~~vi~  349 (921)
                      +++.+  +..+|++.++.....|++...               .......+.+         +.+.+  +.|++|.++++
T Consensus       117 ~~~~~--~~~~G~~~~~~~~~~f~~~~~---------------~~~~~~~~~g~~~~~~~~~~~~~~--~~g~~~~~v~~  177 (564)
T 1zy9_A          117 FVAEE--GKVYGFLSSKIAHPFFAVEDG---------------ELVAYLEYFDVEFDDFVPLEPLVV--LEDPNTPLLLE  177 (564)
T ss_dssp             EEEET--TEEEEESCCSSSEEEEEEETT---------------EEEEEEECTTCCEEEEEECCCEEE--EECSCHHHHHH
T ss_pred             EECCC--CEEEEEEECCCCCCEEEEECC---------------CEEEEEECCCCCCCCEEECCEEEE--EECCCHHHHHH
T ss_conf             33478--627999863776635897358---------------379999627965354143130999--95899999999


Q ss_pred             HHHHCCCCCCCCCCCCCC--CCCCCCCC----CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHH
Q ss_conf             998702999999421224--31234688----998899999985001899933999521236998311357999999589
Q 002442          350 QYTSVTGMPSMPPLFSIA--YHQCRWNY----RDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEE  423 (921)
Q Consensus       350 ~Y~~ltG~p~lpP~walG--~~q~rw~Y----~~~~~v~~v~~~~~~~~IP~D~iwlDi~~~~~~~~Ftwd~~~FPd~~~  423 (921)
                      +|+++||+++ ||.|+.+  ++.|.|++    .++++|+++++.++  ++|++.+++|..|+.+.++|++|+++||+++.
T Consensus       178 ~y~~l~g~~~-~p~w~~~~P~gwnsW~~~~~~~te~~v~~~ad~~~--~~G~~~~~IDdgW~~~~Gdw~~d~~kFP~lk~  254 (564)
T 1zy9_A          178 KYAELVGMEN-NARVPKHTPTGWCSWYHYFLDLTWEETLKNLKLAK--NFPFEVFQIDDAYEKDIGDWLVTRGDFPSVEE  254 (564)
T ss_dssp             HHHHHHHHHT-TCCCCSSCCEEEESHHHHGGGCCHHHHHHHHHHGG--GTTCSEEEECTTSEEETTEEEEECTTCCCHHH
T ss_pred             HHHHHHCCCC-CCCCCCCCCEEECCHHCCCCCCCHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             9999866268-98545688357715204275799999999999998--45982999886512225885538545899899


Q ss_pred             HHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCC-EEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf             9999997599289998388888998155699887683366699998-023220896311248886689999641012333
Q 002442          424 MQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRD-YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENY  502 (921)
Q Consensus       424 m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~-~~g~~WpG~~~~~Df~np~a~~Ww~~~~~~~~~  502 (921)
                      |++++|++|+|+.+|++|.+... +..+|++  ..++++++ +|.. ..+..|+|...++||+||++++||.+.++.  +
T Consensus       255 lvd~lh~~Glk~Giw~~P~~v~~-~S~ly~~--~pdw~v~~-~G~~~~~~~~W~~~~~~lD~t~P~a~~~~~~~~~~--~  328 (564)
T 1zy9_A          255 MAKVIAENGFIPGIWTAPFSVSE-TSDVFNE--HPDWVVKE-NGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSS--L  328 (564)
T ss_dssp             HHHHHHHTTCEEEEEECTTEEET-TCHHHHH--CGGGBCEE-TTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHH--H
T ss_pred             HHHHHHHCCCEEEEEECCCCCCC-CCHHHHH--CCCEEEEC-CCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHH--H
T ss_conf             99999987998999967775688-9866886--88869965-99522200125786341289987799999999999--9


Q ss_pred             CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCC
Q ss_conf             4876841386058999846899633688765578621000000124578987499998610899998388602-447987
Q 002442          503 VGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARA-FFAGSQ  581 (921)
Q Consensus       503 ~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS-~f~Gsq  581 (921)
                       ...+++++|.|||++....+       +  .++.  +...+..+-      ..+.+.++. + +..++.+-+ ...-++
T Consensus       329 -~~~GVD~iK~D~~~~~~~~g-------~--~~~~--~~~~~~y~~------~l~~l~~~~-p-r~i~i~~C~~g~~~s~  388 (564)
T 1zy9_A          329 -RKMGYRYFKIDFLFAGAVPG-------E--RKKN--ITPIQAFRK------GIETIRKAV-G-EDSFILGCGSPLLPAV  388 (564)
T ss_dssp             -HHTTCCEEEECCGGGGGCSS-------B--CSSS--CCHHHHHHH------HHHHHHHHH-C-TTSEEEECSCBSGGGT
T ss_pred             -HHCCCCEEEECCCCCCCCCC-------C--CCCC--CHHHHHHHH------HHHHHHHHC-C-CCEEEEECCCCCCCCC
T ss_conf             -86499889984788766665-------4--3463--549999999------999999657-9-9729980488664421


Q ss_pred             CCCCEE--CCCCCCCHHHHH
Q ss_conf             645011--588725446777
Q 002442          582 RYGAVW--TGDNTAEWEQLR  599 (921)
Q Consensus       582 ry~~~W--tGDn~s~W~~L~  599 (921)
                      +++..|  ++|....|+...
T Consensus       389 ~~~n~~Ris~Di~~~W~s~~  408 (564)
T 1zy9_A          389 GCVDGMRIGPDTAPFWGEHI  408 (564)
T ss_dssp             TTCSEEECSSCCCSSCCTTS
T ss_pred             CCCCEEEECCCCCCCCCCCC
T ss_conf             50346898488466666633


Done!