Query 002447
Match_columns 921
No_of_seqs 374 out of 1861
Neff 7.9
Searched_HMMs 29240
Date Tue Mar 26 16:13:23 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002447.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1173-1177//hhsearch_pdb/002447hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w5f_A Endo-1,4-beta-xylanase 1.0 1 1 702.4 35.0 450 373-872 20-538 (540)
2 1us2_A Xylanase10C, endo-beta- 1.0 1 1 537.4 34.8 400 421-865 43-515 (530)
3 4f8x_A Endo-1,4-beta-xylanase; 1.0 1 1 530.4 25.0 283 576-863 10-327 (335)
4 3ro8_A Endo-1,4-beta-xylanase; 1.0 1 1 526.5 21.3 283 575-864 10-340 (341)
5 3niy_A Endo-1,4-beta-xylanase; 1.0 1 1 524.4 22.9 285 575-864 26-337 (341)
6 3u7b_A Endo-1,4-beta-xylanase; 1.0 1 1 522.6 24.5 279 577-862 11-323 (327)
7 3emz_A Xylanase, endo-1,4-beta 1.0 1 1 520.3 21.8 278 575-860 10-328 (331)
8 1r85_A Endo-1,4-beta-xylanase; 1.0 1 1 512.2 20.2 301 545-861 2-377 (379)
9 1ur1_A Endoxylanase; hydrolase 1.0 1 1 503.4 26.4 283 576-864 31-370 (378)
10 2uwf_A Endoxylanase, alkaline 1.0 1 1 499.8 18.4 279 576-861 15-350 (356)
No 1
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=1.00 E-value=1 Score=702.38 Aligned_cols=450 Identities=19% Similarity=0.282 Sum_probs=382.4
Q ss_pred CCCEEEECCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCCCCCCCCCCCC-CEEEEEECCCCCCCCHHCHHHHHCCC
Q ss_conf 53101217987788889400885-02786059998689765589999878998-49999903557777400156530248
Q 002447 373 FGVNIITNSELSDGTNGWFPLGN-CTLSIGTGSPHILPPMARDSLGPHEPLSG-HYILVTNRTQTWMGPAQMITEKLKLF 450 (921)
Q Consensus 373 ~~~~ii~n~~FE~g~~~W~~~g~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~G-~~l~v~~rt~~w~g~~~~l~~~l~~g 450 (921)
...+++.|++||+|+.||.++|. ++++++.. ..++| ++|++++|+..|+|+++.++..|++|
T Consensus 20 ~~~~lv~n~~FE~g~~gW~~~g~~~~~~~~~~----------------~~~~G~~~l~vt~Rt~~w~g~~~~~~~~l~~G 83 (540)
T 2w5f_A 20 HADYEVVHDTFEVNFDGWCNLGVDTYLTAVEN----------------EGNNGTRGMMVINRSSASDGAYSEKGFYLDGG 83 (540)
T ss_dssp -CCEEEEEECCSSSCTTEEEESTTCEEEEETT----------------SSGGGSCEEEEECCCSTTCEEEEECTTTCCTT
T ss_pred CCCCEEECCCCCCCCCCEEECCCCEEEEEECC----------------CCCCCCEEEEEECCCCCCCCCEEECCCEECCC
T ss_conf 77663826987788777144588438887137----------------77888757999766778888213122015389
Q ss_pred CEEEEEEEEEECCCCCCCEEEEEEEEE-C-----CEEEECCEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEE
Q ss_conf 299999999973799884259999995-7-----7477412699729993999978993149970899995799871099
Q 002447 451 LTYQVAAWVRIGSGATGPQNVNIALGV-D-----NQWVNGGQVEINDDRWHEIGGSFRIEKQPSKVMVYIQGPASGIDVM 524 (921)
Q Consensus 451 ~~Y~vSawvk~~~~~~~~~~v~~~l~~-d-----~~~~~~g~~~v~~~~W~~l~G~~~~~~~~~~~~iy~e~~~~~~~~~ 524 (921)
.+|.||+|||..+. ....++++++. | +.|.++++..++++||++|+|+|++|...+.+.||+|+ +...+||
T Consensus 84 ~~Y~fSawVk~~g~--~~~~v~l~l~~~d~~~~~~~~~~i~~~~~~~g~Wt~L~g~ft~p~~~~~~~lyve~-~~~~~f~ 160 (540)
T 2w5f_A 84 VEYKYSVFVKHNGT--GTETFKLSVSYLDSETEEENKEVIATKDVVAGEWTEISAKYKAPKTAVNITLSITT-DSTVDFI 160 (540)
T ss_dssp CEEEEEEEEECCSS--SEEEEEEEEEEEETTTCCEEEEEEEEEEEETTCCEEEEEEEECCTTEEEEEEEEEE-SSCCCEE
T ss_pred CEEEEEEEEEECCC--CCCEEEEEEEEECCCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEC-CCCCCEE
T ss_conf 88999999991799--87419999997237888713887557898689149998689805887079999980-7988789
Q ss_pred EEEEEECCCCHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCC
Q ss_conf 93234113795767422100001100133699985588986678324686304887711023798889857899998206
Q 002447 525 VAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQTQNSFPIGSCINRSQIDNEDFVKFFTKYF 604 (921)
Q Consensus 525 vDdv~i~~~~~~~~~~~~~~~i~~~rk~~~~~~v~~~~g~~~~ga~v~v~~~~~~F~fG~a~~~~~~~~~~y~~~~~~~f 604 (921)
||||++...... ..+.+++++....++.+++|+||+|+....+.++.|+++++++|
T Consensus 161 vDdvsl~~~~~~------------------------~~~~~~~~~~~l~~~~~~~f~~G~av~~~~l~~~~~~~~~~~~F 216 (540)
T 2w5f_A 161 FDDVTITRKGMA------------------------EANTVYAANAVLKDMYANYFRVGSVLNSGTVNNSSIKALILREF 216 (540)
T ss_dssp EEEEEEEEC---------------------------------CCCSSHHHHTTTTCEEEEEECTTGGGCHHHHHHHHHHC
T ss_pred EEEEEEECCCCC------------------------CCCCCCCCCHHHHHHHHHCCCEEEEECHHHCCCHHHHHHHHHHC
T ss_conf 988999637656------------------------66873455377999986129789993600037989999999767
Q ss_pred CEEECCCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHCCC---------CHHHH
Q ss_conf 5000166556622344588------34610168999999836984687657743544531422179---------98899
Q 002447 605 NWAVFGNELKWYWTESQQG------NFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQSL---------NKNDL 669 (921)
Q Consensus 605 n~~t~eN~~kW~~~ep~~G------~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~~~~~P~W~~~~---------~~~~l 669 (921)
|++|+||+|||+.+||++| +|+|..+|++++||++|||+||||+|+||+ ++|+|+... +++.+
T Consensus 217 n~it~eN~mKw~~~e~~~g~~~~~~~~~f~~aD~~v~~A~~ngi~vrGHtLvWhs--q~P~W~~~~~~~~~g~~~~~~~l 294 (540)
T 2w5f_A 217 NSITCENEMKPDATLVQSGSTNTNIRVSLNRAASILNFCAQNNIAVRGHTLVWHS--QTPQWFFKDNFQDNGNWVSQSVM 294 (540)
T ss_dssp SEEEESSTTSHHHHEEEEEEETTEEEECCTTTHHHHHHHHHTTCEEEEEEEECSS--SCCGGGGBTTSSTTSCBCCHHHH
T ss_pred CEECCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCEEEEEEEECCC--CCCHHHHCCCCCCCCCCCCHHHH
T ss_conf 8612264554113136788766552313128899999998789879888887388--78557763675545676899999
Q ss_pred HHHHHHHHHHHHHHCCCE-----EEEEEEECCCCCCC--------------------CCCCCCCH-HHHHHHHHHHHHCC
Q ss_conf 999999999998770790-----01999531555467--------------------33134794-69999999998419
Q 002447 670 MTAVQNRLTGLLARYKGK-----FRHYDVNNEMLHGS--------------------FYQDKLGK-DIRAYMFKTAHQLD 723 (921)
Q Consensus 670 ~~~~~~~i~~v~~rY~g~-----v~~WDV~NE~~~~~--------------------~~~~~lg~-~~~~~af~~Ar~~d 723 (921)
+++|++||+.|++||+|+ |+.||||||+++.. .|.+.+|+ +|++.||++||++|
T Consensus 295 ~~~l~~~I~~vv~ry~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~~~~i~~aF~~Ar~~d 374 (540)
T 2w5f_A 295 DQRLESYIKNMFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNKFIEKAFTYARKYA 374 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSSTTHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf 99999999999998606378884789877657546875434556542334566667878886295789999999999769
Q ss_pred CC-CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC-----CCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99-669970377767999999877999999999977996204795126999-----987799999999863599799963
Q 002447 724 LS-ATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDS-----PVGPIVCSALDNLGILGLPIWFTE 797 (921)
Q Consensus 724 P~-a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~~-----p~~~~~~~~Ld~~~~~g~pi~iTE 797 (921)
|+ ++||+||||+..+ .+...++++++.|+++|+ |||||+|+|+.. |..+.+++.|++|+.+|+||+|||
T Consensus 375 P~~a~L~~NDyn~~~~----~k~~~~~~lv~~l~~~gv-IdgiG~Q~H~~~~~~~~~~~~~~~~~l~~~a~~Gl~i~iTE 449 (540)
T 2w5f_A 375 PANCKLYYNDYNEYWD----HKRDCIASICANLYNKGL-LDGVGMQSHINADMNGFSGIQNYKAALQKYINIGCDVQITE 449 (540)
T ss_dssp CTTCEEEEEESSTTSH----HHHHHHHHHHHHHHHTTC-CCEEEECCEEESCSSSTTCHHHHHHHHHHHHTTTSEEEEEE
T ss_pred CCCCEEEEEECCCCCC----CHHHHHHHHHHHHHHCCC-CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 7546699970666554----178999999999874885-33799846854788788999999999999986599079973
Q ss_pred ECCCCCC----CCCHHHHHHHHHHHHHC------CCCEEEEEEECCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHH-H
Q ss_conf 0257997----42318999999999981------99968999972577888789---722327899855589999999-9
Q 002447 798 LDVSSIN----EYVRGEDLEVMLREAFA------HPAVEGIMLWGFWELFMSRD---SAHLVNAEGDINEAGKKFLNL-K 863 (921)
Q Consensus 798 ~dv~~~~----e~~qa~~~~~~l~~~~s------~p~v~gi~~Wg~~d~~~~~~---~~~L~d~d~~pKpa~~~~~~l-~ 863 (921)
+|+...+ ++.||++|++++++|++ +|.|.||++|||+|+.+|++ .++|||.|++|||||.+++++ .
T Consensus 450 lDi~~~~~~~~~~~QA~~y~~~~~~~~~~~~~~~~~~v~git~WG~~D~~sW~~~~~~plLfd~~~~pKpAy~~l~~~l~ 529 (540)
T 2w5f_A 450 LDISTENGKFSLQQQADKYKAVFQAAVDINRTSSKGKVTAVCVWGPNDANTWLGSQNAPLLFNANNQPKPAYNAVASIIP 529 (540)
T ss_dssp EEEECTTTTSCHHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEESSSSTTSCTTCGGGCCSSBCTTSCBCHHHHHHTTSSC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
T ss_conf 02268888732999999999999999864311247962599998588898544799930028999799989999999863
Q ss_pred HHHCCCCCC
Q ss_conf 983257532
Q 002447 864 QEWLSHAQG 872 (921)
Q Consensus 864 ~~w~t~~~~ 872 (921)
++||++.++
T Consensus 530 ~~~W~~~~~ 538 (540)
T 2w5f_A 530 QSEWGDGNN 538 (540)
T ss_dssp GGGCCCTTS
T ss_pred HCCCCCCCC
T ss_conf 343679989
No 2
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=1.00 E-value=1 Score=537.39 Aligned_cols=400 Identities=20% Similarity=0.328 Sum_probs=315.2
Q ss_pred CCCCCEEEEEECCCCCC--CCHHCHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEEE-----CCEEEEC-CEEEECCC
Q ss_conf 89984999990355777--7400156530248299999999973799884259999995-----7747741-26997299
Q 002447 421 PLSGHYILVTNRTQTWM--GPAQMITEKLKLFLTYQVAAWVRIGSGATGPQNVNIALGV-----DNQWVNG-GQVEINDD 492 (921)
Q Consensus 421 ~~~G~~l~v~~rt~~w~--g~~~~l~~~l~~g~~Y~vSawvk~~~~~~~~~~v~~~l~~-----d~~~~~~-g~~~v~~~ 492 (921)
+.|.+++.|++|+..|+ |++..+ .+++-.++.... .......+. .++|.++ |..+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 109 (530)
T 1us2_A 43 ALGDGVGAVFDIARPTTLEDAVIAM----------VVNVSAEFKASE---ANLQIFAQLKEDWSKGEWDCLAASSELTAD 109 (530)
T ss_dssp CCSTTEEEEEEECSSEECTTCEEEE----------EEEECHHHHHTT---CEEEEEEEETTEEEEEECCCCBCGGGCC--
T ss_pred CCCCEEEEEECCCCCCCCCCCEEEE----------EEEEEEEECCCC---CCCCEEEEEECCCCCCCEEEEEEEEEECCC
T ss_conf 2477069994144666656653554----------467765544787---654348995055457715899887885168
Q ss_pred CEEEEEEEEEEECC-----CCEEEEEE--ECCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEECCCEEEEEECCCCCC
Q ss_conf 93999978993149-----97089999--579987109993234113795767422100001100133699985588986
Q 002447 493 RWHEIGGSFRIEKQ-----PSKVMVYI--QGPASGIDVMVAGLQIFPVDREARFRHLRRQTDKIRKRDVVLKLSGLDCSS 565 (921)
Q Consensus 493 ~W~~l~G~~~~~~~-----~~~~~iy~--e~~~~~~~~~vDdv~i~~~~~~~~~~~~~~~i~~~rk~~~~~~v~~~~g~~ 565 (921)
.|..|+.+++.... ..++.+|+ ++. +..+|+|||+.+...... ...+..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~i~~~~~~~~~~~----------------------~~~~~~~ 166 (530)
T 1us2_A 110 TDLTLTCTIDEDDDKFNQTARDVQVGIQAKGT-PAGTITIKSVTITLAQEA----------------------YSANVDH 166 (530)
T ss_dssp CCEEEEEECCCSSCTTEESSCCEEEEEEEESS-CCSEEEEEEEEEECC-------------------------CCCCCSC
T ss_pred CCEEEEEEEECCCCCCCCCCCCEEEEEECCCC-CCCEEEECCEEEEECCCC----------------------CCCCCCC
T ss_conf 75389999933774224566642799832788-765055135156502421----------------------1356401
Q ss_pred CCCCEEEEEEECCCCCEEECCCCC------CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 678324686304887711023798------88985789999820650001665566223445883461016899999983
Q 002447 566 MLGTFVKVKQTQNSFPIGSCINRS------QIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLN 639 (921)
Q Consensus 566 ~~ga~v~v~~~~~~F~fG~a~~~~------~~~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~ 639 (921)
|.. ..++.|+||+|+... .+.++.|.++++++||++|+||+|||..+||++|+|+|+.+|++++||++
T Consensus 167 L~~------~~~~~f~~G~a~~~~~w~~~~~l~~~~~~~l~~~~FN~vT~eNemKW~~iEP~~G~~~f~~~D~ivd~a~~ 240 (530)
T 1us2_A 167 LRD------LAPSDFPIGVAVSNTDSATYNLLTNSREQAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWATE 240 (530)
T ss_dssp GGG------GCSSSCCEEEEEBCTTCTTTBTTTCHHHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHH
T ss_pred HHH------HHCCCCEEEEEECCCCCCCHHHCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 899------85148879998562115643330889999999822995778885439992687985684278999999997
Q ss_pred CCCEEEEEEEEECCCCCCHHHHCCC--CHHHHHHHHHHHHHHHHHHCC--CEEEEEEEECCCCC----------CCCCCC
Q ss_conf 6984687657743544531422179--988999999999999987707--90019995315554----------673313
Q 002447 640 HNIQTRGHCIFWEVQATVQPWIQSL--NKNDLMTAVQNRLTGLLARYK--GKFRHYDVNNEMLH----------GSFYQD 705 (921)
Q Consensus 640 ~gi~vrGH~L~W~~~~~~P~W~~~~--~~~~l~~~~~~~i~~v~~rY~--g~v~~WDV~NE~~~----------~~~~~~ 705 (921)
|||+||||+|+||++.+.|+|+... +++.+++++++||+.+++||+ |+|..|||+||+++ .++|.+
T Consensus 241 nGi~VrgHtLvWhs~~q~P~Wv~~~~Gs~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~ 320 (530)
T 1us2_A 241 NNMTVHGHALVWHSDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYV 320 (530)
T ss_dssp TTCEEEEEEEECCCGGGSCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHH
T ss_pred CCCEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHH
T ss_conf 89989874021366355825775278997999999999999999971888966899865376568862212356777998
Q ss_pred CCCH--HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--CCCHHHHHH
Q ss_conf 4794--699999999984199966997037776799999987799999999997799620479512699--998779999
Q 002447 706 KLGK--DIRAYMFKTAHQLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHID--SPVGPIVCS 781 (921)
Q Consensus 706 ~lg~--~~~~~af~~Ar~~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~--~p~~~~~~~ 781 (921)
.+|+ +|++.+|++||++||+++||+||||++... .++..++++++.|+++|+||||||+|+|+. .|..+.+++
T Consensus 321 ~lG~~~d~i~~AF~~Ar~aDP~AkL~~NDYn~~~~~---~k~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~ 397 (530)
T 1us2_A 321 KSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNN---AKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISA 397 (530)
T ss_dssp HTTSCSHHHHHHHHHHHHHCTTSEEEEEESSTTSCS---HHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC---CHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHH
T ss_conf 759688899999999998799987996445433565---22689999999999789834079870023788999999999
Q ss_pred HHHHHHHCCCCEEEEEECCCCCC------------------CCCHHHHHHHHHHHHH--C-CCCEEEEEEECCCCCCCCC
Q ss_conf 99998635997999630257997------------------4231899999999998--1-9996899997257788878
Q 002447 782 ALDNLGILGLPIWFTELDVSSIN------------------EYVRGEDLEVMLREAF--A-HPAVEGIMLWGFWELFMSR 840 (921)
Q Consensus 782 ~Ld~~~~~g~pi~iTE~dv~~~~------------------e~~qa~~~~~~l~~~~--s-~p~v~gi~~Wg~~d~~~~~ 840 (921)
.|++|+.+|+||+|||+|+...+ ++.||++|++++++++ + +|.|.||++|||+|+.+|+
T Consensus 398 ~L~~~a~lGlpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y~~~~~~~l~~~~~~~v~GIT~WG~~D~~SW~ 477 (530)
T 1us2_A 398 AMKKVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWL 477 (530)
T ss_dssp HHHHHHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBGGGCHH
T ss_pred HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
T ss_conf 99999854990899957647776555444455556787678999999999999999602258966899998685798667
Q ss_pred C-------------CCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9-------------722327899855589999999998
Q 002447 841 D-------------SAHLVNAEGDINEAGKKFLNLKQE 865 (921)
Q Consensus 841 ~-------------~~~L~d~d~~pKpa~~~~~~l~~~ 865 (921)
+ .++|||.|++|||||.++.++.+.
T Consensus 478 ~~~P~~~~~~g~~~~plLfD~d~~pKPAy~al~~~l~~ 515 (530)
T 1us2_A 478 DGLYREQFEDEKISWPLLFDNNYNDKPALRGFADALIG 515 (530)
T ss_dssp HHHTTTTTTTCCCCCCSSBCTTSCBCHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHC
T ss_conf 78875433456778762088998899899999999843
No 3
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=1.00 E-value=1 Score=530.38 Aligned_cols=283 Identities=20% Similarity=0.357 Sum_probs=260.4
Q ss_pred ECCCCCEEECCCCC---CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEC
Q ss_conf 04887711023798---889857899998206500016655662234458834610168999999836984687657743
Q 002447 576 TQNSFPIGSCINRS---QIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWE 652 (921)
Q Consensus 576 ~~~~F~fG~a~~~~---~~~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W~ 652 (921)
.++.|.||+|+... .+.++.|+++++++||++|+||+|||..+||++|+|+|+.+|++++||++|||+||||+|+||
T Consensus 10 ~~g~~~fG~A~~~~~~~~~~~~~y~~~~~~~Fn~~t~eN~mKW~~~ep~~G~~~f~~aD~~v~~a~~~gi~vrGHtLvWh 89 (335)
T 4f8x_A 10 RRGKHWFGTAADIPGTAETTDAAYLKVLKQNFGEITPANAMKFMYTETEQNVFNFTEGEQFLEVAERFGSKVRCHNLVWA 89 (335)
T ss_dssp HTTCSEEEEEECTTTSGGGGCHHHHHHHHHHCSEEEESSTTSGGGTEEETTEECCHHHHHHHHHHHHTTCEEEEEEEECS
T ss_pred HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf 67997588885476444557889999999768978778766668757879946851368999999978987987650166
Q ss_pred CCCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC------CCCCCCCCHHHHHHHHHHHHHC--
Q ss_conf 5445314221--79988999999999999987707900199953155546------7331347946999999999841--
Q 002447 653 VQATVQPWIQ--SLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHG------SFYQDKLGKDIRAYMFKTAHQL-- 722 (921)
Q Consensus 653 ~~~~~P~W~~--~~~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~~------~~~~~~lg~~~~~~af~~Ar~~-- 722 (921)
+ ++|+|+. .++++++++++++||+++++||+|+|+.||||||+++. ++|.+.+|++|++.||++||++
T Consensus 90 ~--q~P~W~~~~~~~~~~l~~~~~~~I~~v~~rY~g~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~ 167 (335)
T 4f8x_A 90 S--QVSDFVTSKTWTAKELTAVMKNHIFKTVQHFGRRCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALA 167 (335)
T ss_dssp S--SCCHHHHTSCCCHHHHHHHHHHHHHHHHHHHGGGCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHH
T ss_pred C--CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 6--68577755899999999999999999999818976499984476479996335703553597999999999998422
Q ss_pred ---CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC---CCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf ---99966997037776799999987799999999997799620479512699---998779999999986359979996
Q 002447 723 ---DLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHID---SPVGPIVCSALDNLGILGLPIWFT 796 (921)
Q Consensus 723 ---dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~---~p~~~~~~~~Ld~~~~~g~pi~iT 796 (921)
||+++||+||||++.+. .+...++++++.|+++|+||||||+|+|+. .|..+.+++.|++|+++|+||+||
T Consensus 168 ~~~dP~a~L~~NDYn~e~~~---~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~p~~~~~~~~l~~~a~lGl~v~iT 244 (335)
T 4f8x_A 168 QIGANDVKLYYNDYGIENPG---TKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQLATKQAYIKANLDVAVT 244 (335)
T ss_dssp HTTCTTSEEEEEESSCSSSS---HHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCC---HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 15899807997032345870---767999999999997899756066543415788999999999999999759905886
Q ss_pred EECCCCC-----C---CCCHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCC-------CCCCCCCCCCCCHHHHHHH
Q ss_conf 3025799-----7---4231899999999998199-968999972577888789-------7223278998555899999
Q 002447 797 ELDVSSI-----N---EYVRGEDLEVMLREAFAHP-AVEGIMLWGFWELFMSRD-------SAHLVNAEGDINEAGKKFL 860 (921)
Q Consensus 797 E~dv~~~-----~---e~~qa~~~~~~l~~~~s~p-~v~gi~~Wg~~d~~~~~~-------~~~L~d~d~~pKpa~~~~~ 860 (921)
|+|++.. + ++.||+.|++++++|++|| .|.||++||++|+.+|++ +++|||.|++|||||.++.
T Consensus 245 ElDi~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~~~~v~git~WG~~D~~sW~~~~~p~~~~plLfd~~~~pKpAy~~v~ 324 (335)
T 4f8x_A 245 ELDVRFSTVPYYTAAAQKQQAEDYYVSVASCMNAGPRCIGVVVWDFDDAYSWVPSAFAGQGGACLFNNTLEAKPAYYAVA 324 (335)
T ss_dssp EEEEEBSSSCCSSHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBGGGCSHHHHSTTCBCCSSBCTTCCBCHHHHHHH
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 32356667888998999999999999999998376874699997686687667777888898756899979998999999
Q ss_pred HHH
Q ss_conf 999
Q 002447 861 NLK 863 (921)
Q Consensus 861 ~l~ 863 (921)
++.
T Consensus 325 ~~l 327 (335)
T 4f8x_A 325 DAL 327 (335)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 998
No 4
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A
Probab=1.00 E-value=1 Score=526.54 Aligned_cols=283 Identities=19% Similarity=0.370 Sum_probs=256.5
Q ss_pred EECCCCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCC
Q ss_conf 30488771102379888985789999820650001665566223445883461016899999983698468765774354
Q 002447 575 QTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQ 654 (921)
Q Consensus 575 ~~~~~F~fG~a~~~~~~~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~~ 654 (921)
..+++|+||+|++...+.++ +.++++++||++|+||+|||+.+||++|+|+|+.+|++++||++|||+||||+|+||+
T Consensus 10 ~~~~~F~~G~Av~~~~l~~~-~~~~~~~~Fn~it~EN~mKw~~~ep~~G~~~f~~aD~~v~~a~~ngi~vrGHtLvWh~- 87 (341)
T 3ro8_A 10 VYKNDFLIGNAISAEDLEGT-RLELLKMHHDVVTAGNAMKPDALQPTKGNFTFTAADAMIDKVLAEGMKMHGHVLVWHQ- 87 (341)
T ss_dssp HTTTTCEEEEEECGGGGSHH-HHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEECSS-
T ss_pred HHCCCCEEEEECCHHHCCCH-HHHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC-
T ss_conf 82779807586273451818-9999998689787776522667258899456278899999998689778730344755-
Q ss_pred CCCHHHHCC----------CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--------------CCCCCCCCHH
Q ss_conf 453142217----------9988999999999999987707900199953155546--------------7331347946
Q 002447 655 ATVQPWIQS----------LNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHG--------------SFYQDKLGKD 710 (921)
Q Consensus 655 ~~~P~W~~~----------~~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~~--------------~~~~~~lg~~ 710 (921)
++|+|+.. +++++++++|++||++|++||+|+|+.|||+||+++. ++|.+.+|++
T Consensus 88 -q~P~W~~~~~d~~g~~~~~s~~~l~~~~~~hI~~vv~rYkg~i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d 166 (341)
T 3ro8_A 88 -QSPAWLNTKKDDNNNTVPLGRDEALDNLRTHIQTVMKHFGNKVISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSD 166 (341)
T ss_dssp -SCCGGGTEEECTTSCEEECCHHHHHHHHHHHHHHHHHHHGGGSSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTT
T ss_pred -CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCHH
T ss_conf -5877775367666666778999999999999999999748964599886134468877643345664578277762989
Q ss_pred HHHHHHHHHHHC-----CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC-------CCCEEEEEEECCCCC-CCHH
Q ss_conf 999999999841-----999669970377767999999877999999999977-------996204795126999-9877
Q 002447 711 IRAYMFKTAHQL-----DLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQ-------GAPVGGIGIQGHIDS-PVGP 777 (921)
Q Consensus 711 ~~~~af~~Ar~~-----dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~-------g~~iDgIG~Q~H~~~-p~~~ 777 (921)
|+..||++||++ ||+++|||||||++.+. ++..++++|+.|+++ |+||||||+|+|+.. +.++
T Consensus 167 ~i~~AF~~Ar~a~~~~pdp~akL~~NDYn~~~~~----k~~~~~~lv~~l~~~~a~~~~~g~~IdGIG~Q~H~~~~~~~~ 242 (341)
T 3ro8_A 167 YVEQAFLAAREVLDENPSWNIKLYYNDYNEDNQN----KATAIYNMVKDINDRYAAAHNGKLLIDGVGMQGHYNINTNPD 242 (341)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCEEEEEESCTTSHH----HHHHHHHHHHHHHHHHHHHTTTCCSCCEEEECCEEETTCCHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC----HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHCCCCCCHH
T ss_conf 9999999999845327897707998647875630----379999999999986520357898612165421105789999
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCC--------CCHHHHHHHHHHHHHCCC-CEEEEEEECCCCCCCCCC--CCCCC
Q ss_conf 9999999986359979996302579974--------231899999999998199-968999972577888789--72232
Q 002447 778 IVCSALDNLGILGLPIWFTELDVSSINE--------YVRGEDLEVMLREAFAHP-AVEGIMLWGFWELFMSRD--SAHLV 846 (921)
Q Consensus 778 ~~~~~Ld~~~~~g~pi~iTE~dv~~~~e--------~~qa~~~~~~l~~~~s~p-~v~gi~~Wg~~d~~~~~~--~~~L~ 846 (921)
.+++.|++|+++|+||+|||+||...+. ..||..|++++++|++|+ .|.||++||++|+.+|++ .++||
T Consensus 243 ~~~~~l~~~a~lGl~v~iTElDi~~~~~~~~~~~~~~~qa~~y~~~~~~~~~~~~~v~giT~WG~~D~~sW~~~~~pllf 322 (341)
T 3ro8_A 243 NVKLSLEKFISLGVEVSVSELDVTAGNNYTLPENLAVGQAYLYAQLFKLYKEHADHIARVTFWGMDDNTSWRAENNPLLF 322 (341)
T ss_dssp HHHHHHHHHHTTTCEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHTGGGEEEEEEC-----------------
T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 99999999997299369870001588888898799999999999999999854577139999699889766789987638
Q ss_pred CCCCCCCHHHHHHHHHHH
Q ss_conf 789985558999999999
Q 002447 847 NAEGDINEAGKKFLNLKQ 864 (921)
Q Consensus 847 d~d~~pKpa~~~~~~l~~ 864 (921)
|.|++|||||.++.+..+
T Consensus 323 d~~~~~KpAy~~v~~~~k 340 (341)
T 3ro8_A 323 DKNLQAKPAYYGVIDPAE 340 (341)
T ss_dssp ------------------
T ss_pred CCCCCCCHHHHHHHCCCC
T ss_conf 999899989999867402
No 5
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=1.00 E-value=1 Score=524.36 Aligned_cols=285 Identities=24% Similarity=0.415 Sum_probs=258.2
Q ss_pred EECCCCCEEECC--CCCC-CCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEE
Q ss_conf 304887711023--7988-8985789999820650001665566223445883461016899999983698468765774
Q 002447 575 QTQNSFPIGSCI--NRSQ-IDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFW 651 (921)
Q Consensus 575 ~~~~~F~fG~a~--~~~~-~~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W 651 (921)
..+++|+||+|+ +... ..++.|+++++++||++|+||+|||..+||++|+|+|+.+|++++||++|||++|||+|+|
T Consensus 26 a~~~~f~~G~Av~~~~~~~~~~~~y~~~~~~~Fn~~t~eN~mKW~~iep~~G~~~f~~~D~~v~~a~~~gi~vrgHtLvW 105 (341)
T 3niy_A 26 AEKLNIYIGFAAINNFWSLSDEEKYMEVARREFNILTPENQMKWDTIHPERDRYNFTPAEKHVEFAEENNMIVHGHTLVW 105 (341)
T ss_dssp HHHTTCEEEEEECTTGGGSTTHHHHHHHHHHHCSEEEESSTTSHHHHCCBTTEEECHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHCCCEEEEEECCCCHHCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 98569869899616713106778999999976897887754216875488994682789999999997897687652304
Q ss_pred CCCCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC------CCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 35445314221--79988999999999999987707900199953155546------73313479469999999998419
Q 002447 652 EVQATVQPWIQ--SLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHG------SFYQDKLGKDIRAYMFKTAHQLD 723 (921)
Q Consensus 652 ~~~~~~P~W~~--~~~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~~------~~~~~~lg~~~~~~af~~Ar~~d 723 (921)
|. ++|+|+. .++++++++++++||+.|++||+|+|++|||||||++. ++|.+.+|++|++.+|++||++|
T Consensus 106 h~--q~P~W~~~~~~~~~~~~~~~~~~i~~v~~rY~g~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~d 183 (341)
T 3niy_A 106 HN--QLPGWITGREWTKEELLNVLEDHIKTVVSHFKGRVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEAD 183 (341)
T ss_dssp SS--SCCHHHHTSCCCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHC
T ss_pred CC--CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHC
T ss_conf 56--5865664489998999999999999999973887608987346555656533450343068999999999999779
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC--CHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 996699703777679999998779999999999779962047951269999--877999999998635997999630257
Q 002447 724 LSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDSP--VGPIVCSALDNLGILGLPIWFTELDVS 801 (921)
Q Consensus 724 P~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~~p--~~~~~~~~Ld~~~~~g~pi~iTE~dv~ 801 (921)
|+++||+||||++... .++..|+++++.|+++|+||||||+|+|+..+ ....+++.|++|+++|+||+|||+|+.
T Consensus 184 P~a~L~~NDyn~e~~~---~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~~~~~~~~l~~~a~lGl~v~iTElDv~ 260 (341)
T 3niy_A 184 PDAILIYNDYSIEEIN---AKSNFVYNMIKELKEKGVPVDGIGFQMHIDYRGLNYDSFRRNLERFAKLGLQIYITEMDVR 260 (341)
T ss_dssp TTSEEEEEESSCSSSS---HHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCCCHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCEEEEECCCCCCCC---HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 9964885020335674---6799999999999978997124863110378999999999999999973992799964246
Q ss_pred CC-------CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC-------CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99-------74231899999999998199968999972577888789-------72232789985558999999999
Q 002447 802 SI-------NEYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRD-------SAHLVNAEGDINEAGKKFLNLKQ 864 (921)
Q Consensus 802 ~~-------~e~~qa~~~~~~l~~~~s~p~v~gi~~Wg~~d~~~~~~-------~~~L~d~d~~pKpa~~~~~~l~~ 864 (921)
.. .++.||++|++++++|++||.|.||++||++|+.+|++ .++|||.|++|||||.++.++..
T Consensus 261 ~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~v~git~Wg~~D~~sW~~~~~~~~~~plLfd~~~~pKpAy~av~~~l~ 337 (341)
T 3niy_A 261 IPLSGSEDYYLKKQAEICAKIFDICLDNPAVKAIQFWGFTDKYSWVPGFFKGYGKALLFDENYNPKPCYYAIKEVLE 337 (341)
T ss_dssp EESSSCHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBTTSCSHHHHSTTEECCSSBCTTSCBCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 78989806899999999999999996179867999978866876577778888987648999699899999999987
No 6
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=1.00 E-value=1 Score=522.65 Aligned_cols=279 Identities=23% Similarity=0.394 Sum_probs=256.0
Q ss_pred CCC-CCEEECCCCCCCCCHHHHHHH--HHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECC
Q ss_conf 488-771102379888985789999--82065000166556622344588346101689999998369846876577435
Q 002447 577 QNS-FPIGSCINRSQIDNEDFVKFF--TKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEV 653 (921)
Q Consensus 577 ~~~-F~fG~a~~~~~~~~~~y~~~~--~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~ 653 (921)
+++ |.||+|++ .+.++.|++++ +++||++|+||+|||..+||++|+|+|+.+|++++||++|||++|||+|+||+
T Consensus 11 ~~g~~~~G~a~~--~~~~~~~~~~~~~~~~Fn~~t~eN~mKW~~iep~~G~~~f~~~D~~v~~a~~~gi~vrGHtLvWh~ 88 (327)
T 3u7b_A 11 AAGKQYFGTALT--VRNDQGEIDIINNKNEIGSITPENAMKWEAIQPNRGQFNWGPADQHAAAATSRGYELRCHTLVWHS 88 (327)
T ss_dssp HTTCCEEEEEEC--CCSCCHHHHHHTCTTTCCEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEEEEEEEST
T ss_pred HCCCCEEEEECC--CCCCHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC
T ss_conf 679977998606--766878999997672078587775311788568799168288999999999789978776665577
Q ss_pred CCCCHHHHCCC--CHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC------CCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 44531422179--988999999999999987707900199953155546------7331347946999999999841999
Q 002447 654 QATVQPWIQSL--NKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHG------SFYQDKLGKDIRAYMFKTAHQLDLS 725 (921)
Q Consensus 654 ~~~~P~W~~~~--~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~~------~~~~~~lg~~~~~~af~~Ar~~dP~ 725 (921)
+.|+|+... +++++++++++||++|++||+|+|+.||||||+++. ++|.+.+|++|++.+|++||++||+
T Consensus 89 --q~P~W~~~~~~~~~~l~~~~~~~I~~v~~rY~g~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~dP~ 166 (327)
T 3u7b_A 89 --QLPSWVANGNWNNQTLQAVMRDHINAVMGRYRGKCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAADPT 166 (327)
T ss_dssp --TCCHHHHTCCCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHHCTT
T ss_pred --CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCC
T ss_conf --684777668999999999999999999998278762898741663789974456145415689999999999827999
Q ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCC----------CCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 669970377767999999877999999999977996204795126999----------9877999999998635997999
Q 002447 726 ATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHIDS----------PVGPIVCSALDNLGILGLPIWF 795 (921)
Q Consensus 726 a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~~----------p~~~~~~~~Ld~~~~~g~pi~i 795 (921)
++||+||||++... .+...++++++.|+++|+||||||+|+|+.. |..+.+++.|++|+.+|+||+|
T Consensus 167 a~L~~Ndyn~e~~~---~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p~~~~~~~~l~~~a~lGl~v~i 243 (327)
T 3u7b_A 167 TKLYYNDYNLEYGN---AKTEGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTPSRAKLASVLQGLADLGVDVAY 243 (327)
T ss_dssp SEEEEEESSCTTCS---HHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CEEEECCCCCCCCC---HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 82883254555770---666999999999997899703697765236555443357999999999999999965992699
Q ss_pred EEECCCCCC------CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC-------CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 630257997------4231899999999998199968999972577888789-------722327899855589999999
Q 002447 796 TELDVSSIN------EYVRGEDLEVMLREAFAHPAVEGIMLWGFWELFMSRD-------SAHLVNAEGDINEAGKKFLNL 862 (921)
Q Consensus 796 TE~dv~~~~------e~~qa~~~~~~l~~~~s~p~v~gi~~Wg~~d~~~~~~-------~~~L~d~d~~pKpa~~~~~~l 862 (921)
||+|++... ++.||++|++++++|++||.|.||++||++|+.+|++ +++|||.|++|||||.++.+.
T Consensus 244 TElDv~~~~p~~~~~~~~Qa~~y~~~~~~~~~~~~v~gIt~WG~~D~~sW~~~~f~~~~~~lLfD~~~~pKpAy~~v~~~ 323 (327)
T 3u7b_A 244 TELDIRMNTPATQQKLQTNADAYARIVGSCMDVKRCVGITVWGISDKYSWVPGTFPGEGSALLWNDNFQKKPSYTSTLNT 323 (327)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBGGGCSHHHHSTTEECCSSBCTTSCBCHHHHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 85645667899989999999999999999983788059999726768756677678889877799998998999999999
No 7
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=1.00 E-value=1 Score=520.26 Aligned_cols=278 Identities=24% Similarity=0.455 Sum_probs=253.0
Q ss_pred EECCCCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCC
Q ss_conf 30488771102379888985789999820650001665566223445883461016899999983698468765774354
Q 002447 575 QTQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQ 654 (921)
Q Consensus 575 ~~~~~F~fG~a~~~~~~~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~~ 654 (921)
..++.|+||+|++...+.++ +++++++||++|+||+|||..+||++|+|+|+.+|++++||++|||++|||+|+||+
T Consensus 10 ~~~~~F~~G~av~~~~l~~~--~~~~~~~Fn~~t~eN~mKW~~iep~~G~~~f~~~D~~v~~a~~~gi~vrgHtLvWh~- 86 (331)
T 3emz_A 10 SYANSFKIGAAVHTRMLQTE--GEFIAKHYNSVTAENQMKFEEVHPREHEYTFEAADEIVDFAVARGIGVRGHTLVWHN- 86 (331)
T ss_dssp GGTTTCEEEEEECHHHHHHH--HHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEECCSBCSS-
T ss_pred HHCCCCEEEEECCHHHCCCH--HHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC-
T ss_conf 83568838787684543759--999997699898776413554147799368368999999999789878665456565-
Q ss_pred CCCHHHHC------CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--------CCCCCCCCHHHHHHHHHHHH
Q ss_conf 45314221------79988999999999999987707900199953155546--------73313479469999999998
Q 002447 655 ATVQPWIQ------SLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHG--------SFYQDKLGKDIRAYMFKTAH 720 (921)
Q Consensus 655 ~~~P~W~~------~~~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~~--------~~~~~~lg~~~~~~af~~Ar 720 (921)
+.|+|+. .++++++++++++||++|++||+|+|+.||||||+++. ++|.+.+|++|++.||++||
T Consensus 87 -q~P~W~~~~~~g~~~~~~~l~~~~~~~I~~v~~rYkg~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~~Ar 165 (331)
T 3emz_A 87 -QTPAWMFEDASGGTASREMMLSRLKQHIDTVVGRYKDQIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFNMAH 165 (331)
T ss_dssp -SCCGGGGBCTTSSBCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHHHHH
T ss_pred -CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH
T ss_conf -5847675166678789999999999999999998089763999743654788874335770566658899999999998
Q ss_pred HCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--CCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 4199966997037776799999987799999999997799620479512699--99877999999998635997999630
Q 002447 721 QLDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHID--SPVGPIVCSALDNLGILGLPIWFTEL 798 (921)
Q Consensus 721 ~~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~--~p~~~~~~~~Ld~~~~~g~pi~iTE~ 798 (921)
++||+++||+||||++.+ .++..++++++.|+++|+||||||+|+|+. .|..+.+++.|++|+++|+||+|||+
T Consensus 166 ~adP~a~L~~NDyn~~~~----~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lGl~v~iTEl 241 (331)
T 3emz_A 166 EADPNALLFYNDYNETDP----VKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLDVQLHVTEL 241 (331)
T ss_dssp HHCTTSEEEEEESSCSSH----HHHHHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred HHCCCCEEEECCCCCCCH----HHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 359986588524345670----7799999999999978995066977716168999999999999999975992799506
Q ss_pred CCCCCC---------------CCCHHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCC---------CCCCCCCCCCCC
Q ss_conf 257997---------------423189999999999819-9968999972577888789---------722327899855
Q 002447 799 DVSSIN---------------EYVRGEDLEVMLREAFAH-PAVEGIMLWGFWELFMSRD---------SAHLVNAEGDIN 853 (921)
Q Consensus 799 dv~~~~---------------e~~qa~~~~~~l~~~~s~-p~v~gi~~Wg~~d~~~~~~---------~~~L~d~d~~pK 853 (921)
|++..+ ++.||+.|++++++|++| |.|.||++||++|+.+|++ .++|||.|++||
T Consensus 242 Di~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~~~~v~giT~WG~~D~~sW~~~~p~~g~~~~pllfd~~~~pK 321 (331)
T 3emz_A 242 DLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREYRSNITSVTFWGVADNYTWLDNFPVRGRKNWPFVFDTELQPK 321 (331)
T ss_dssp EEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESSSSTTCCGGGSSSSTTCCCCCSSBCTTSCBC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 55776666554445789989999999999999999996579736999989988976677888888878877768996998
Q ss_pred HHHHHHH
Q ss_conf 5899999
Q 002447 854 EAGKKFL 860 (921)
Q Consensus 854 pa~~~~~ 860 (921)
|||.++.
T Consensus 322 pAy~~v~ 328 (331)
T 3emz_A 322 DSFWRII 328 (331)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
T ss_conf 8999875
No 8
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=1.00 E-value=1 Score=512.16 Aligned_cols=301 Identities=24% Similarity=0.396 Sum_probs=265.9
Q ss_pred CCCCEECCCEEEEEECCCCCCCCCCEEEEEE-ECCCCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCC
Q ss_conf 0011001336999855889866783246863-048877110237988898578999982065000166556622344588
Q 002447 545 QTDKIRKRDVVLKLSGLDCSSMLGTFVKVKQ-TQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQG 623 (921)
Q Consensus 545 ~i~~~rk~~~~~~v~~~~g~~~~ga~v~v~~-~~~~F~fG~a~~~~~~~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G 623 (921)
.|+++||....+... .. .++. .+..|.||+|++...+.++.|.+++.++||.+|+||+|||..+||++|
T Consensus 2 ~~~~~~~~~~~~~~~---~~-------~L~~~~~~~f~~G~a~~~~~~~~~~~~~l~~~~fn~vt~eNe~kW~~~ep~~G 71 (379)
T 1r85_A 2 NADSYAKKPHISALN---AP-------QLDQRYKNEFTIGAAVEPYQLQNEKDVQMLKRHFNSIVAENVMKPISIQPEEG 71 (379)
T ss_dssp -------CCCCBGGG---SC-------CHHHHHTTTCEEEEEECGGGGGCHHHHHHHHHHCSEEEESSTTSHHHHCSBTT
T ss_pred CHHHCCCCCCCCCCC---CC-------CHHHHHHHCCEEEEECCHHHCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCC
T ss_conf 644327899753557---63-------69999865688999817334488899999984099687888665888158799
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHC-----------------CCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 346101689999998369846876577435445314221-----------------799889999999999999877079
Q 002447 624 NFNYKDADDMLDLCLNHNIQTRGHCIFWEVQATVQPWIQ-----------------SLNKNDLMTAVQNRLTGLLARYKG 686 (921)
Q Consensus 624 ~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~~~~~P~W~~-----------------~~~~~~l~~~~~~~i~~v~~rY~g 686 (921)
+|+|+.+|++++||++|||+||||+|+||. +.|+|+. .++++.+++++++||+.|++||+|
T Consensus 72 ~~~f~~~D~~v~~a~~~gi~vrghtlvW~~--q~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g 149 (379)
T 1r85_A 72 KFNFEQADRIVKFAKANGMDIRFHTLVWHS--QVPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD 149 (379)
T ss_dssp BCCCHHHHHHHHHHHHTTCEEEEECSCCST--TCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 668445789999999788989872331366--671665247677624566543356799899999999999999997078
Q ss_pred EEEEEEEECCCCCC------CCCCCCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 00199953155546------733134794699999999984-19996699703777679999998779999999999779
Q 002447 687 KFRHYDVNNEMLHG------SFYQDKLGKDIRAYMFKTAHQ-LDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQG 759 (921)
Q Consensus 687 ~v~~WDV~NE~~~~------~~~~~~lg~~~~~~af~~Ar~-~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g 759 (921)
+|+.|||+||+++. ++|.+.+|++|++.+|++||+ +||+++||+||||++.+. +...++++++.|+++|
T Consensus 150 ~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~adP~a~L~~NDyn~~~~~----k~~~~~~~v~~l~~~g 225 (379)
T 1r85_A 150 DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNTEVEP----KRTALYNLVKQLKEEG 225 (379)
T ss_dssp TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEEESCTTSTT----HHHHHHHHHHHHHHTT
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCH----HHHHHHHHHHHHHHCC
T ss_conf 754998533662689975676177761199999999999863799878996456654522----4799999999999789
Q ss_pred CCEEEEEEECCCC--CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC----------------CCCHHHHHHHHHHHHHC
Q ss_conf 9620479512699--99877999999998635997999630257997----------------42318999999999981
Q 002447 760 APVGGIGIQGHID--SPVGPIVCSALDNLGILGLPIWFTELDVSSIN----------------EYVRGEDLEVMLREAFA 821 (921)
Q Consensus 760 ~~iDgIG~Q~H~~--~p~~~~~~~~Ld~~~~~g~pi~iTE~dv~~~~----------------e~~qa~~~~~~l~~~~s 821 (921)
+||||||+|+|+. .|..+.+++.|++|+.+|+||||||+|++..+ ++.||++|+++++++++
T Consensus 226 ~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~lGlpI~iTElDi~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~ 305 (379)
T 1r85_A 226 VPIDGIGHQSHIQIGWPSEAEIEKTINMFAALGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEK 305 (379)
T ss_dssp CCCCEEEECCEECSSSSCHHHHHHHHHHHHHTTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 96128988677258999999999999999855990899626426877655455566778878999999999999999983
Q ss_pred CCC-EEEEEEECCCCCCCCCC-------------------------------CCCCCCCCCCCCHHHHHHHH
Q ss_conf 999-68999972577888789-------------------------------72232789985558999999
Q 002447 822 HPA-VEGIMLWGFWELFMSRD-------------------------------SAHLVNAEGDINEAGKKFLN 861 (921)
Q Consensus 822 ~p~-v~gi~~Wg~~d~~~~~~-------------------------------~~~L~d~d~~pKpa~~~~~~ 861 (921)
||. |.||++|||+|+.+|++ .++|||.|++|||||.++.+
T Consensus 306 ~~~~V~git~WG~~D~~sW~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~pllfd~~~~pKpAy~~v~~ 377 (379)
T 1r85_A 306 LSDKISNVTFWGIADNHTWLDSRADVYYDANGNVVVDPNAPYAKVEKGKGKDAPFVFGPDYKVKPAYWAIID 377 (379)
T ss_dssp TGGGEEEEEESSSSTTSCGGGGGCCEEECTTSCEECCTTSCCSEEETTCSCCCCSSBCTTSBBCHHHHHHHS
T ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHC
T ss_conf 768445999967847987666545567777775332333321110134467876337899889889999861
No 9
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=1.00 E-value=1 Score=503.39 Aligned_cols=283 Identities=28% Similarity=0.465 Sum_probs=258.6
Q ss_pred ECCCCCEEECCCCCCC--CCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECC
Q ss_conf 0488771102379888--98578999982065000166556622344588346101689999998369846876577435
Q 002447 576 TQNSFPIGSCINRSQI--DNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEV 653 (921)
Q Consensus 576 ~~~~F~fG~a~~~~~~--~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~ 653 (921)
.++.|.||+|+....+ .++.|.+++.++||.+|+||+|||..+||++|+|+|+.+|++++||++|||+||||+|+||.
T Consensus 31 ~~~~f~~G~a~~~~~~~~~~~~~~~l~~~~fn~vt~eN~~kW~~~ep~~G~~~f~~~D~~v~~a~~~gi~vrgHtlvW~~ 110 (378)
T 1ur1_A 31 YKDNFLIGAALNATIASGADERLNTLIAKEFNSITPENCMKWGVLRDAQGQWNWKDADAFVAFGTKHNLHMVGHTLVWHS 110 (378)
T ss_dssp TTTTCEEEEEECHHHHTTCCHHHHHHHHHHCSEEEESSTTSHHHHBCTTCCBCCHHHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred HHHCCEEEEEECHHHHCCCCHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 86588899994778837678899999982499587877565999268799568347999999999888978763232366
Q ss_pred CCCCHHHHC------CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC------CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 445314221------79988999999999999987707900199953155546------733134794699999999984
Q 002447 654 QATVQPWIQ------SLNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHG------SFYQDKLGKDIRAYMFKTAHQ 721 (921)
Q Consensus 654 ~~~~P~W~~------~~~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~~------~~~~~~lg~~~~~~af~~Ar~ 721 (921)
+.|+|+. .++++++++++++||+.|++||+|+|..|||+||+++. ++|.+.+|++|++.+|++||+
T Consensus 111 --q~P~W~~~d~~g~~~~~~~~~~~~~~~I~~v~~rY~g~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~~Ar~ 188 (378)
T 1ur1_A 111 --QIHDEVFKNADGSYISKAALQKKMEEHITTLAGRYKGKLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANE 188 (378)
T ss_dssp --SSCGGGTBCTTSCBCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred --CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH
T ss_conf --672544137778979989999999999999999717861299842465367897567726654369999999999997
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--CCCHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 199966997037776799999987799999999997799620479512699--998779999999986359979996302
Q 002447 722 LDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHID--SPVGPIVCSALDNLGILGLPIWFTELD 799 (921)
Q Consensus 722 ~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~--~p~~~~~~~~Ld~~~~~g~pi~iTE~d 799 (921)
+||+++|++||||++.+. +...++++++.|+++|+||||||+|+|+. .|..+.+++.|++|+++|+||+|||+|
T Consensus 189 ~dP~a~L~~Ndyn~~~~~----k~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~~Gl~i~iTElD 264 (378)
T 1ur1_A 189 VDPKAHLMYNDYNIERTG----KREATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLGLRVHFTSLD 264 (378)
T ss_dssp HCTTSEEEEEESSTTSTT----HHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred HCCCCEEEECCCCCCCCC----HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 699987996445655651----0589999999999789971569755757889999999999999998469907997144
Q ss_pred CCCCC-------------------------------CCCHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCCCCC-----
Q ss_conf 57997-------------------------------42318999999999981999-689999725778887897-----
Q 002447 800 VSSIN-------------------------------EYVRGEDLEVMLREAFAHPA-VEGIMLWGFWELFMSRDS----- 842 (921)
Q Consensus 800 v~~~~-------------------------------e~~qa~~~~~~l~~~~s~p~-v~gi~~Wg~~d~~~~~~~----- 842 (921)
++..+ ++.||++|+++++++++||. |.||++|||+|+.+|+++
T Consensus 265 i~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~V~git~WG~~D~~sW~~~~p~~g 344 (378)
T 1ur1_A 265 VDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRATFWGVSDDASWLNGFPIPG 344 (378)
T ss_dssp EECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBGGGCGGGTSSSTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 37887654333432222101233356555789879999999999999999984627520799988846887677888778
Q ss_pred ----CCCCCCCCCCCHHHHHHHHHHH
Q ss_conf ----2232789985558999999999
Q 002447 843 ----AHLVNAEGDINEAGKKFLNLKQ 864 (921)
Q Consensus 843 ----~~L~d~d~~pKpa~~~~~~l~~ 864 (921)
++|||.|++|||||.++.++.+
T Consensus 345 ~~~~plLfd~~~~pKpAy~a~~~~~~ 370 (378)
T 1ur1_A 345 RTNYPLLFDRKLQPKDAYFRLLDLKR 370 (378)
T ss_dssp CCCCCSSBCTTSCBCHHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHH
T ss_conf 77855007899889989999999855
No 10
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=1.00 E-value=1 Score=499.78 Aligned_cols=279 Identities=24% Similarity=0.404 Sum_probs=254.0
Q ss_pred ECCCCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCC
Q ss_conf 04887711023798889857899998206500016655662234458834610168999999836984687657743544
Q 002447 576 TQNSFPIGSCINRSQIDNEDFVKFFTKYFNWAVFGNELKWYWTESQQGNFNYKDADDMLDLCLNHNIQTRGHCIFWEVQA 655 (921)
Q Consensus 576 ~~~~F~fG~a~~~~~~~~~~y~~~~~~~fn~~t~eN~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~vrGH~L~W~~~~ 655 (921)
.++.|.||+|++...+.+ .|.+++.++||.+|+||+|||..+||++|+|+|+.+|++++||++|||+||||+|+||.
T Consensus 15 ~~~~f~~G~a~~~~~~~~-~~~~l~~~~fn~vt~en~~kW~~~ep~~G~~~f~~~D~~v~~a~~~gi~v~ghtlvW~~-- 91 (356)
T 2uwf_A 15 YQEQFDIGAAVEPYQLEG-RQAQILKHHYNSLVAENAMKPVSLQPREGEWNWEGADKIVEFARKHNMELRFHTLVWHS-- 91 (356)
T ss_dssp TTTTCEEEEEECGGGSSH-HHHHHHHHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEECCSEESS--
T ss_pred HHHCCEEEEEECHHHCCH-HHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC--
T ss_conf 621586999826365298-99999994199799898536888468799568258999999999788979876323656--
Q ss_pred CCHHHHCC-----------------CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC------CCCCCCCCHHHH
Q ss_conf 53142217-----------------9988999999999999987707900199953155546------733134794699
Q 002447 656 TVQPWIQS-----------------LNKNDLMTAVQNRLTGLLARYKGKFRHYDVNNEMLHG------SFYQDKLGKDIR 712 (921)
Q Consensus 656 ~~P~W~~~-----------------~~~~~l~~~~~~~i~~v~~rY~g~v~~WDV~NE~~~~------~~~~~~lg~~~~ 712 (921)
+.|+|+.. ++++.+++++++||+.|++||+|+|..|||+||+++. ++|.+.+|++|+
T Consensus 92 q~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~~i 171 (356)
T 2uwf_A 92 QVPEWFFIDENGNRMVDETDPEKRKANKQLLLERMENHIKTVVERYKDDVTSWDVVNEVIDDDGGLRESEWYQITGTDYI 171 (356)
T ss_dssp SCCGGGGBCTTSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEESCBCTTSSBCCCHHHHHHTTHHH
T ss_pred CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCHHHH
T ss_conf 58566733777762456653345789999999999999999999728852499743365368997456617765228999
Q ss_pred HHHHHHHHH-CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCC--CCCHHHHHHHHHHHHHC
Q ss_conf 999999984-199966997037776799999987799999999997799620479512699--99877999999998635
Q 002447 713 AYMFKTAHQ-LDLSATLFVNDYHVEDGCDPRSSPEKYIEHILNLQEQGAPVGGIGIQGHID--SPVGPIVCSALDNLGIL 789 (921)
Q Consensus 713 ~~af~~Ar~-~dP~a~L~~Ndy~~~~~~~~~~~~~~~~~~i~~l~~~g~~iDgIG~Q~H~~--~p~~~~~~~~Ld~~~~~ 789 (921)
+.+|++||+ +||+++|++||||++.+. ++..++++++.|+++|+||||||+|+|+. .|..+.+++.|++|+.+
T Consensus 172 ~~af~~Ar~~~dP~a~L~~Ndyn~~~~~----k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~ 247 (356)
T 2uwf_A 172 KVAFETARKYGGEEAKLYINDYNTEVPS----KRDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSL 247 (356)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCTTSHH----HHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCC----HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC
T ss_conf 9999999862799887996656655641----068999999999978996027988776078999999999999999856
Q ss_pred CCCEEEEEECCCCCC-----------------CCCHHHHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCC----------
Q ss_conf 997999630257997-----------------423189999999999819-9968999972577888789----------
Q 002447 790 GLPIWFTELDVSSIN-----------------EYVRGEDLEVMLREAFAH-PAVEGIMLWGFWELFMSRD---------- 841 (921)
Q Consensus 790 g~pi~iTE~dv~~~~-----------------e~~qa~~~~~~l~~~~s~-p~v~gi~~Wg~~d~~~~~~---------- 841 (921)
|+||+|||+|++..+ ++.||++|+++++++++| |.|.||++|||+|+.+|++
T Consensus 248 Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~git~WG~~D~~sW~~~~~~~~p~~g 327 (356)
T 2uwf_A 248 GLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEELSATISSVTFWGIADNHTWLDDRAREYNNGV 327 (356)
T ss_dssp TCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTTSCHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99189971310688876544455556798689999999999999999840697779999899778766667665677777
Q ss_pred ---CCCCCCCCCCCCHHHHHHHH
Q ss_conf ---72232789985558999999
Q 002447 842 ---SAHLVNAEGDINEAGKKFLN 861 (921)
Q Consensus 842 ---~~~L~d~d~~pKpa~~~~~~ 861 (921)
.++|||.|++|||||.++.+
T Consensus 328 ~~~~plLfd~~~~pKpAy~~~~~ 350 (356)
T 2uwf_A 328 GVDAPFVFDHNYRVKPAYWRIID 350 (356)
T ss_dssp CCCCCSSBCTTSBBCHHHHHHHS
T ss_pred CCCCCEEECCCCCCCHHHHHHHH
T ss_conf 88977207899889889999997
Done!