Your job contains 1 sequence.
>002450
MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENVRCKRFKVTKVNGFIVYSRVKR
SRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVENV
IEETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVT
QSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGV
SVVYMGGIKFQASGLRGIIRDGGILCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFE
NGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLC
NSCVKSKKPQGTMTYTTGIRIRASGPKLVSRSSENDSMCISYQNNKRERKKTRKLLEADL
VSKSSSKSVSLRNLLKTRSPWELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKK
TVLISKPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEG
YKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAV
EAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREF
HVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAIKKYAGNS
LETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNL
RGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKL
LSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCSQLVTFKGTSMLQKRVPA
CRIGSSSTDSTECVSGVEVG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002450
(920 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 1157 2.9e-187 3
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 277 2.4e-24 3
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 217 3.8e-23 3
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 220 1.0e-22 4
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 202 1.3e-21 4
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 264 4.7e-19 2
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 155 1.0e-15 4
TAIR|locus:2168088 - symbol:AT5G59830 "AT5G59830" species... 190 1.7e-11 1
TAIR|locus:2173179 - symbol:AT5G13660 "AT5G13660" species... 145 2.2e-06 1
MGI|MGI:109529 - symbol:Dpf2 "D4, zinc and double PHD fin... 123 0.00033 1
UNIPROTKB|H0YCN2 - symbol:RSF1 "Remodeling and spacing fa... 109 0.00034 3
RGD|1311699 - symbol:Dpf2 "D4, zinc and double PHD finger... 120 0.00070 1
ZFIN|ZDB-GENE-041014-190 - symbol:dpf3 "D4, zinc and doub... 120 0.00070 1
MGI|MGI:1352748 - symbol:Dpf1 "D4, zinc and double PHD fi... 120 0.00086 2
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 1157 (412.3 bits), Expect = 2.9e-187, Sum P(3) = 2.9e-187
Identities = 218/380 (57%), Positives = 286/380 (75%)
Query: 531 YACGQKLLEGYKNGLGIICH------CCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQ 584
++ G+K N L +IC C+S P F H EC SL SIP+G+W+CKYC+
Sbjct: 603 FSHGRKYSANDNNDLCVICADGGNLLLCDS--CPRAF--HIECVSLPSIPRGNWHCKYCE 658
Query: 585 NMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSG 644
N F + +++ N+ G++ GVD V+Q+ RCIR+VKN+EAE +GC+LC G DF +SG
Sbjct: 659 NKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGRCIRVVKNMEAETNGCVLCSGSDFCRSG 718
Query: 645 FGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEK 704
FGPRTI++CDQCE+E+H+GCL + DL+ELPKG WFC MDC+RINS LQ LL+ AEK
Sbjct: 719 FGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEK 778
Query: 705 LPEFHLNAIK-KYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDCFDPIVD 763
L + L I+ K N + ++SD+D+RWRL+SGK +PE+R+LLSQA+AIFHDCFDPIVD
Sbjct: 779 LSDSSLGIIQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVD 838
Query: 764 SISGRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKI 823
+SG +LIP MVYG+ ++GQ++GG+ CA+LTVN++VVSAG+LRVFG+EVAELPLVAT
Sbjct: 839 PLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMC 898
Query: 824 NHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELLSIYRKRCS 883
+ KGYFQLLF+CIEKLLS L V+SIV+PAAEEAE +W +KFGF+K+ PE LS Y K C
Sbjct: 899 SREKGYFQLLFSCIEKLLSSLNVESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICY 958
Query: 884 QLVTFKGTSMLQKRVPACRI 903
Q+V FKG SMLQK V + +I
Sbjct: 959 QMVRFKGASMLQKPVDSHQI 978
Score = 415 (151.1 bits), Expect = 2.9e-187, Sum P(3) = 2.9e-187
Identities = 116/318 (36%), Positives = 162/318 (50%)
Query: 80 NSKIHEGRINKVVKNVLNENGILES-VVE-EENQLVQMTVE--NVIEETVKGKKAPICKE 135
N+ + VV L G+ ES VE + + LV + ++ N +E + I E
Sbjct: 113 NTLVESSSGKVVVIERLVTGGLAESPAVETDSSSLVDVVIDDINFVELLHEAIPVEILSE 172
Query: 136 EPIS-KVECFPRKEGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLIE 194
+ +V+ K S +++K K+ + K + + +V + N +E
Sbjct: 173 GSLDFEVKRLGTKVRTMGKSYSVSEK--KKHGSFKRTAQIYKSIVRMKK-VNNLVPENVE 229
Query: 195 VEAIAE-G-SALTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQA 252
V A + G L ++ L K I + +P TV +LFETGLLDG+SVVYMG +K QA
Sbjct: 230 VLAEPDFGREGLDEQSHSVSLA-DKSILIRSRPETVRDLFETGLLDGLSVVYMGTVKSQA 288
Query: 253 SXXXXXXXXXXXXCSCSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLRAC 312
CSCS C+ VI SKFEIHACKQYRRASQYICFENGKSLL+VL
Sbjct: 289 FPLRGIIRDGGILCSCSSCDWANVISTSKFEIHACKQYRRASQYICFENGKSLLDVLNIS 348
Query: 313 RSVPLPMLKATLQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVKSKKPQGT 372
R+ PL L+AT+ A+ +EK F C RCKG FP + +G G LC SC + + Q +
Sbjct: 349 RNTPLHALEATILDAVDYASKEKRFTCKRCKGPFPFSSLGHRGF--LCKSCSEVETSQAS 406
Query: 373 MTYTTGIRIRASGPKLVS 390
+ T R S P ++
Sbjct: 407 LAAT---RTSTSAPACIT 421
Score = 282 (104.3 bits), Expect = 2.9e-187, Sum P(3) = 2.9e-187
Identities = 62/129 (48%), Positives = 80/129 (62%)
Query: 442 ELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKS 501
++TR + R L+ + S + SSQ + + K K + + K ++ S LS +K
Sbjct: 454 KITRKALRQALVGKAYLSASTNVSSQKKCRSKFKKMLTQHSVTPKALKSVS--LSVSSKK 511
Query: 502 R-WNITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQ 560
R + + KDQ LHKLVFD GLP+GTE+GYYA GQKLL GYK G GI C+CC EVSPS
Sbjct: 512 RSYRLARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMGAGIYCYCCKCEVSPSL 571
Query: 561 FEAHAECAS 569
FEAHA AS
Sbjct: 572 FEAHAGWAS 580
Score = 111 (44.1 bits), Expect = 3.3e-155, Sum P(3) = 3.3e-155
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 1 MKRELDYELAGSLDETSTQSLPQAGIQASDCVKAACEN-VRCKRFKVTKVNGFIVYSRVK 59
MK +L E S+ ++ + L G +C +A + CKR K T+VNGFIVY+R +
Sbjct: 1 MKEDLVPESNSSVWQSPVKRLAVDG----ECGEAGDRSRTSCKRIKTTQVNGFIVYTRTR 56
Query: 60 RSRFSNSDDLLEDDVIDKRINSKIHEGRINKVVKNVLNENGILESVVEEENQLVQMTVEN 119
+++F+ + ED+ + +++ + E + V + + S V E N V+N
Sbjct: 57 KTKFTKLHEQ-EDE--NAGLSNHLEESKPTSGVTSGFGGDMCRSSSVGETNVSGSSCVKN 113
Query: 120 VIEETVKGK 128
+ E+ GK
Sbjct: 114 TLVESSSGK 122
Score = 72 (30.4 bits), Expect = 4.1e-165, Sum P(3) = 4.1e-165
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 454 ANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSR 502
+ ST ++ V SS RKIT+K+ + L+ K + +AS +S K R
Sbjct: 435 SESTSISPVFMSSLGNSTRKITRKALRQALVGKAYLSASTNVSSQKKCR 483
Score = 58 (25.5 bits), Expect = 1.3e-131, Sum P(3) = 1.3e-131
Identities = 36/111 (32%), Positives = 47/111 (42%)
Query: 206 SPK--KNLELKMS-KKIS--LNKKPMTVTEL-FETG-LLDGVSVVYMG-GIKFQASXXXX 257
+PK K++ L +S KK S L +K + +L F+ G L +G + Y G K
Sbjct: 496 TPKALKSVSLSVSSKKRSYRLARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMG 555
Query: 258 XXXXXXXXCSCSLCNGCRVIPPSKFEIHACKQYRRASQ-YICFENGKSLLE 307
C C C + PS FE HA RR YI NG SL E
Sbjct: 556 AGIY----CYCCKCE----VSPSLFEAHAGWASRRKPYFYIYTSNGVSLHE 598
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 277 (102.6 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 84/270 (31%), Positives = 126/270 (46%)
Query: 635 CRGCDFSKSGFGPR----TILLCDQCEREFHVGCL--KKHKMADLRELPKGKWFCCMDCS 688
C+ CD + + G ++L C CER +H CL + HK+ + FC C
Sbjct: 669 CKFCDAAVASGGKDGNFISLLSCGMCERRYHQLCLNDEAHKV---QSFGSASSFCGPKCL 725
Query: 689 RINSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLS 748
+ LQ L + E + + I + ++T SD + + A E L+
Sbjct: 726 ELFEKLQKYLGVKTEIEGGYSWSLIHR-----VDTDSDTNSQM-----SAQRIENNSKLA 775
Query: 749 QAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSSVVSAGILR 806
+AI +CF PIVD SG DLI +++Y G N + G Y AIL ++SA LR
Sbjct: 776 VGLAIMDECFLPIVDRRSGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAASLR 835
Query: 807 VFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFG 866
G ++AE+P + T I +G + LF IE + L+V+ +V+PA + WT FG
Sbjct: 836 FHGMQLAEMPFIGTRHIYRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTGNFG 895
Query: 867 FKKIDPELLSIYRKRCSQLVTFKGTSMLQK 896
F +D + R + LV F G MLQK
Sbjct: 896 FTPLDDSVRKEMRS-LNTLV-FPGIDMLQK 923
Score = 85 (35.0 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 39/129 (30%), Positives = 58/129 (44%)
Query: 441 W-ELTRNSSRPGLIANSTPVTSVHKSSQSQRQRKITKKSKKTVLISKPFENASPPLSFPN 499
W EL + S R N+ P S S RK K + T+L+ + +P ++ N
Sbjct: 455 WDELHKKSKRSLYYNNARP--SCGSDSHYLHGRKTKKIGRCTLLVRSSKDKKNPAINGFN 512
Query: 500 KSRWNITPKDQRLHKLVFDESGLPD-GTEVGYYAC-GQK-LLEGYKNGLGIICHCCNSEV 556
+ K L L+ ESG+ +V Y G K +LEG+ GI C CC+ +
Sbjct: 513 P----YSGKRTLLSWLI--ESGVVQLRQKVQYMRRRGAKVMLEGWITREGIHCDCCSKIL 566
Query: 557 SPSQFEAHA 565
+ S+FE HA
Sbjct: 567 TVSRFEIHA 575
Score = 75 (31.5 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 524 DGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYC 583
DG + ACG + G +G +IC C+ PS + H C + +P GDW+C C
Sbjct: 619 DGDDPNDDACG---ICG--DGGDLIC--CDG--CPSTY--HQNCLGMQVLPSGDWHCPNC 667
Query: 584 QNMF 587
F
Sbjct: 668 TCKF 671
Score = 65 (27.9 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLE 307
C+ C +++ S+FEIHA + + Q I E+G SLL+
Sbjct: 559 CDCCSKILTVSRFEIHAGSKSCQPFQNIYLESGASLLQ 596
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 217 (81.4 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 60/206 (29%), Positives = 104/206 (50%)
Query: 711 NAIKKYAGNSLETVSDIDVRWRLL----SGKAATPETRLLLSQAVAIFHDCFDPIVDSIS 766
+A++ G+ + +D D+ W L+ G+ E L AV I H F+P D S
Sbjct: 353 SALENLLGSKIAVGNDGDLVWTLMRAPNEGEHYDDEQISKLESAVEILHQGFEPTNDVFS 412
Query: 767 GRDLIPSMVYGRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAELPLVATSKINHG 826
GRDL+ ++Y ++ G G Y ++ + ++ +RV ++V E+PLVAT
Sbjct: 413 GRDLVEELIYRKDRTGVG-RGFYTVLIERKNEPITVAAVRV-DKDVVEIPLVATLSSYRR 470
Query: 827 KGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDP-ELLSIYRKRCSQL 885
G ++L +EK +S + V +VLPAA+E + WT++FGF ++ E L + + +
Sbjct: 471 SGMCRVLMDELEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHG---M 527
Query: 886 VTFKGTSMLQKRVPACRIGSSSTDST 911
+ F GT M K + R + S + +
Sbjct: 528 LDFVGTIMCHKFLQKERAENDSAEES 553
Score = 123 (48.4 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 618 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRT--ILLCDQCEREFHVGCLKKHKMADLRE 675
C+ + E +L C C CD S P ++ C+QC+R FH+ CLK+ D
Sbjct: 282 CLGLSSLPEEDLWFCPCCC-CDICGSMESPANSKLMACEQCQRRFHLTCLKE----DSCI 336
Query: 676 LPKGKWFCCMDCSRINSVLQNLL 698
+ WFC C+R+ S L+NLL
Sbjct: 337 VSSRGWFCSSQCNRVFSALENLL 359
Score = 83 (34.3 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 650 ILLCDQCEREFHVGCLKKHKMADLRELPKGK-WFC---CMD-CSRINSVLQNLLVQEAEK 704
+LLCD C FH CL L LP+ WFC C D C + S + L+ +
Sbjct: 268 LLLCDGCPSAFHHACL------GLSSLPEEDLWFCPCCCCDICGSMESPANSKLMACEQC 321
Query: 705 LPEFHLNAIKK 715
FHL +K+
Sbjct: 322 QRRFHLTCLKE 332
Score = 66 (28.3 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 547 IICHCCNSEVSPSQFEAHAECASLSSIPQGD-WYCKYC 583
++C C PS F HA C LSS+P+ D W+C C
Sbjct: 269 LLCDGC-----PSAFH-HA-CLGLSSLPEEDLWFCPCC 299
Score = 59 (25.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 666 KKHKMADLRELPKGKWFCCMDCSRINSVLQNLLVQEAEKLPEFHLNAI-KKYAGNSLETV 724
K++K + PKGKWF + + ++ V Q+ Q+ + +P++ L+ + A S V
Sbjct: 60 KRNKKEQRYKSPKGKWFYSLAKACMSCVDQDSQ-QQLQIVPKYDLSCLPSNIASESSSDV 118
Query: 725 SD 726
S+
Sbjct: 119 SN 120
Score = 54 (24.1 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 137 PISKVECFPRK---EGGSEVSNGLNKKCLKRPSAMKPKVEPVEVLVTQSEGFGNESMSLI 193
P + C P E S+VSN KK KR +VE ++V T E + S LI
Sbjct: 99 PKYDLSCLPSNIASESSSDVSNQKQKKSKKRG-----RVEDLDVKSTAPEKDNHPSADLI 153
Query: 194 EV 195
++
Sbjct: 154 KI 155
Score = 53 (23.7 bits), Expect = 5.8e-16, Sum P(3) = 5.8e-16
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 266 CSCSLCNGCRVIP-PSKFEIHACKQYRRASQYICFENGKSLL 306
C C C+ C + P+ ++ AC+Q +R C + ++
Sbjct: 296 CPCCCCDICGSMESPANSKLMACEQCQRRFHLTCLKEDSCIV 337
Score = 46 (21.3 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 327 ALSSLPEEKSFACVRCKGTFPITCV 351
++ S K AC +C+ F +TC+
Sbjct: 306 SMESPANSKLMACEQCQRRFHLTCL 330
Score = 46 (21.3 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 297 ICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSFACVRC 342
+C G LL C P A L LSSLPEE + C C
Sbjct: 261 VCHWGGDLLL-----CDGCPSAFHHACL--GLSSLPEEDLWFCPCC 299
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 220 (82.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 69/233 (29%), Positives = 110/233 (47%)
Query: 682 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 740
FC C + LQ L + LPE F + ++++ S V+D D+ S K A
Sbjct: 753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804
Query: 741 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 798
++ A ++ +CF P+VD SG +L+ ++VY G N +F A+L
Sbjct: 805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861
Query: 799 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAE 858
+++ +R+ G ++AE+P + T + +G + L IE L L+V +V+PA E
Sbjct: 862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESALGSLKVDKLVIPAVPELI 921
Query: 859 SIWTDKFGFKKI-DPELLSIYRKRCSQLVTFKGTSMLQKRVPACRIGSSSTDS 910
WT FGF + D E +I K + LV F G ML K + +I S S
Sbjct: 922 DTWTSGFGFAPVNDSEKKTI--KNLNLLV-FPGVDMLGKSLVKEKITDSVVSS 971
Score = 85 (35.0 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 47/176 (26%), Positives = 72/176 (40%)
Query: 2 KRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENV-RCKRFKVTKVNGFIVYSRVKR 60
++ D + S+++ S + G + V ENV K K ++ RV R
Sbjct: 7 QKGFDLNVCASIEDFSESDIKAEG-ETDSLVDGNVENVIEIKDKKKVIEREILITRRVLR 65
Query: 61 SRFSNSDDLLEDDVIDKRINSK---IHEGRINKVVKNVLNENGILESVVEEENQLVQMTV 117
S S + DL+ D K + K + G VK + + + +S+V EE +
Sbjct: 66 SG-SVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECV-KSLVPEEIRGDDFRS 123
Query: 118 ENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVS--NGLNKKCLKRPSAMKPK 171
E +E K ++ KEE + + PRK G S S NGL C R S K K
Sbjct: 124 EVKVES--KDDRSDDGKEEKVQRKRGRPRKFGMSSQSDDNGLISNCKLRTSLGKKK 177
Score = 82 (33.9 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 20/84 (23%), Positives = 35/84 (41%)
Query: 551 CCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMF-ERKRFLQHDANAVEAGRVSGVD 609
CC+ PS F H C + P G WYC C F E+ +H+ + + + +
Sbjct: 664 CCDG--CPSTF--HQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTLPS-----LS 714
Query: 610 SVEQITKRCIRIVKNLEAELSGCL 633
S ++C + + A+ C+
Sbjct: 715 SCRLCEEKCSKHYPHTLADHQACI 738
Score = 78 (32.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 650 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 688
++ CD C FH CL D+++ P G W+C +CS
Sbjct: 662 LICCDGCPSTFHQSCL------DIKKFPSGAWYC-YNCS 693
Score = 66 (28.3 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 537 LLEGYKNGLGIICHCCNSEVSPSQFEAHA 565
LLEG GI C+CC+ S FE HA
Sbjct: 572 LLEGIITKEGIRCNCCDEVFSVLDFEVHA 600
Score = 55 (24.4 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 549 CHCCNSEVS---PSQFEAHAECASLSSIPQG----DWYC-KYCQNMFE 588
C C + S P H C + G D +C KYCQ +FE
Sbjct: 716 CRLCEEKCSKHYPHTLADHQACINQDGTVPGERSTDSFCGKYCQELFE 763
Score = 55 (24.4 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 30/105 (28%), Positives = 38/105 (36%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLR-ACRSVPLPMLKATLQSAL 328
CN C V FE+HA + + + E G SLL+ L + LK
Sbjct: 584 CNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDF 643
Query: 329 SSLPEEKSFACVRC-KGTFPITCVGKTGPGPLCNSCVKSKK-PQG 371
S + C C G I C G P SC+ KK P G
Sbjct: 644 GS-GDPNDDTCGICGDGGDLICCDGC--PSTFHQSCLDIKKFPSG 685
Score = 47 (21.6 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 670 MADLRELPKGKWFCCMDCSRINSVLQNLLVQE 701
M D +P CMDC + + +L+ ++ +E
Sbjct: 549 MIDSTIVPLNGKVQCMDCKKTDILLEGIITKE 580
Score = 40 (19.1 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHV 662
C+ C+ D G + + C+ C+ F V
Sbjct: 563 CMDCKKTDILLEGIITKEGIRCNCCDEVFSV 593
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 202 (76.2 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 43/134 (32%), Positives = 73/134 (54%)
Query: 739 ATPETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGR--NLRGQEFGGMYCAILTVN 796
A E +LS A+ + H+ F+P+ GRDL +++ R + F G Y +L N
Sbjct: 814 AAAENHCILSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFSGFYTVLLERN 873
Query: 797 SSVVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE 856
+ +VS +R+ G++VAE+P + T + +G ++L +EK+L L V+ +VLPA
Sbjct: 874 NELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGVERLVLPAVPC 933
Query: 857 AESIWTDKFGFKKI 870
+ W + FGF K+
Sbjct: 934 VLNTWINSFGFTKM 947
Score = 90 (36.7 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 653 CDQCEREFHVGCLKKHKMAD-LRELPKGKWFCCMDCSRINSVLQNLLVQEAEKL 705
C QCE ++H CL+ D L ++ KWFC DC S+ N+ +A K+
Sbjct: 761 CKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEE--SLEPNMYGDDASKI 812
Score = 87 (35.7 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 536 KLLEGYKNGLGIICHCCNSEV----SPSQFEAHAECASLSSIPQGDWYCKYC 583
KL +G + +CH + PS F HA C L +P GDW+C+ C
Sbjct: 687 KLRQGENDVFCSVCHYGGKLILCDGCPSAF--HANCLGLEDVPDGDWFCQSC 736
Score = 80 (33.2 bits), Expect = 4.7e-18, Sum P(4) = 4.7e-18
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 650 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDC 687
++LCD C FH CL L ++P G WFC C
Sbjct: 706 LILCDGCPSAFHANCL------GLEDVPDGDWFCQSCC 737
Score = 76 (31.8 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 24/76 (31%), Positives = 31/76 (40%)
Query: 532 ACGQKLLE----GYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYC-KYCQNM 586
ACGQ L+ K I C C + PS C SL I W+C K C+
Sbjct: 740 ACGQFFLKTTSTNAKEEKFISCKQCELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEES 799
Query: 587 FERKRFLQHDANAVEA 602
E + DA+ +EA
Sbjct: 800 LEPNMY-GDDASKIEA 814
Score = 65 (27.9 bits), Expect = 6.6e-18, Sum P(3) = 6.6e-18
Identities = 31/110 (28%), Positives = 45/110 (40%)
Query: 268 CSLCNGCRVIPPSKFEIHACKQYRRASQYICFENGKSLLEVL-----RACRSVPLPMLKA 322
CS C RV + FE+HA + I ++G+SLLE + ++ P MLK
Sbjct: 629 CSCCR--RVFTINGFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKM 686
Query: 323 TLQSALSSL------PEEKSFACVRCKGTFPITCVG-KTGP-GP-LCNSC 363
L+ + + K C C F C+G + P G C SC
Sbjct: 687 KLRQGENDVFCSVCHYGGKLILCDGCPSAFHANCLGLEDVPDGDWFCQSC 736
Score = 62 (26.9 bits), Expect = 4.6e-19, Sum P(4) = 4.6e-19
Identities = 32/106 (30%), Positives = 43/106 (40%)
Query: 471 QRKITKKSKKTVLIS-KPFENASPPLSFPNKSRWNITPKDQRLHKLVFDESGLPDGTEVG 529
+ ++T + K VL S K + P+S + R NI L L+ + LP
Sbjct: 556 KNRVTSRGKTRVLRSRKRAQRVITPISRKHSPR-NI------LSWLMDNNVVLP---REN 605
Query: 530 YYACGQKLLEGYKNGL----GIICHCCNSEVSPSQFEAHAECASLS 571
C QK K G GI C CC + + FE HA AS S
Sbjct: 606 IRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGASCS 651
Score = 58 (25.5 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 272 NGCRVIPPSKFEIHAC--KQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALS 329
+G I P + + +C K ++ ASQ C S+L + RS + KAT S+
Sbjct: 268 SGMLTIAPQEHQF-SCIDKDFKPASQR-C--QSLSVLTSVSGIRSEASDINKATEISSKK 323
Query: 330 SLPEEKSFACVRCKGTF-PITCVGKTGPGPLCNSCVKS 366
S K + G + P C+ K+GP + +S ++S
Sbjct: 324 STAAHKKDILHKKPGIWHPFDCLAKSGPQAV-SSFIRS 360
Score = 42 (19.8 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 324 LQSALSSLPEEKSFACVRCKGTFPITCVGKTGPGPLCNSCVK 365
L++ ++ EEK +C +C+ + +C+ G C+S K
Sbjct: 746 LKTTSTNAKEEKFISCKQCELKYHPSCLRYDGA---CDSLDK 784
Score = 40 (19.1 bits), Expect = 9.0e-20, Sum P(4) = 9.0e-20
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 322 ATLQSALSSLPEEKSFACV 340
A L L+ P+E F+C+
Sbjct: 265 ACLSGMLTIAPQEHQFSCI 283
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 264 (98.0 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 104/381 (27%), Positives = 172/381 (45%)
Query: 546 GIICHCCNSEVSPSQFEAHA------ECASL---SSIPQGD-----WYCKYC--QNMFER 589
G++C CCN VS S+F+ HA C +L S P W +Y +N +
Sbjct: 657 GVVCTCCNKTVSLSEFKNHAGFNQNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGWRL 716
Query: 590 KRFLQHDANAVEAGRVSGVDSVEQIT---------KRCIRIVKNLEAE--LSGCLLCRGC 638
++ D N G V G D E I + C+ + E S C C C
Sbjct: 717 EKASDDDPNDDSCG-VCG-DGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSCT-CWIC 773
Query: 639 DFSKSGFGPRTI-LLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINSVLQNL 697
S R+ C QC ++H CL+ ++ R+L +FC +C ++ + L +
Sbjct: 774 SELVSDNAERSQDFKCSQCAHKYHGTCLQG--ISKRRKLFPETYFCGKNCEKVYNGLSSR 831
Query: 698 LVQEAEKLPEFHLNAIKKYAGNSLETVSDIDVRWRLLSGKAATPETRLLLSQAVAIFHDC 757
+ + +K + + + + R L+ KA E L+ A++I +
Sbjct: 832 VGIINPNADGLSWSILKCFQEDGMVHSA------RRLALKA---ECNSKLAVALSIMEES 882
Query: 758 FDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSSVVSAGILRVFGQEVAEL 815
F +VD +G D+IP ++Y G +F G Y ++ + ++S +RV G +AE+
Sbjct: 883 FLSMVDPRTGIDMIPHVLYNWGSTFARLDFDGFYTVVVEKDDVMISVASIRVHGVTIAEM 942
Query: 816 PLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPELL 875
PLVAT +G ++L A IE++L L+V+ +V+ A WT+ FGFK +D E
Sbjct: 943 PLVATCSKYRRQGMCRILVAAIEEMLMSLKVEKLVVAALPSLVETWTEGFGFKPMDDEER 1002
Query: 876 SIYRKRCSQLVTFKGTSMLQK 896
KR + L+ F GT++L+K
Sbjct: 1003 DAL-KRIN-LMVFPGTTLLKK 1021
Score = 56 (24.8 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 31/147 (21%), Positives = 67/147 (45%)
Query: 56 SRVKRSRFSNSDDLLEDDVIDKRINSKIHEGRI-----NKVVKNVLNENGILESVVEEEN 110
++V+ +R SN D L ++D I + S E + + +V +V + N + S +E +
Sbjct: 367 NKVEVARNSNPDKLKKEDTICLNLISGCPESVLTVSEGSHLVHDV-DANQEIHSDLEVQT 425
Query: 111 QLVQMTVENVIE-ETVKGKKAPICKEEPISKVECFPRKEGGSEVSNGLNKKCLKRPSAMK 169
++ V + +E +++ GK+ E+ SK K ++ + +K L R S
Sbjct: 426 KISSQKVSSRLERQSIIGKEISGTHEQEASK-GIVASKLIAEDMHESVMRKNLHRRSKKI 484
Query: 170 PKVEPVEVLVTQSEGFGNESMSLIEVE 196
++P + Q + + S++ E +
Sbjct: 485 SDIKPASL--DQHDSLDSNSLNSFEFQ 509
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 155 (59.6 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 65/247 (26%), Positives = 110/247 (44%)
Query: 682 FCCMDCSRINSVLQNLLVQEAEKLPE-FHLNAIKKYAGNSLETVSDIDVRWRLLSGKAAT 740
FC C + LQ L + LPE F + ++++ S V+D D+ S K A
Sbjct: 753 FCGKYCQELFEELQ-LFIGVKHPLPEGFSWSFLRRFELPS--EVADCDI-----SEKIAY 804
Query: 741 PETRLLLSQAVAIFHDCFDPIVDSISGRDLIPSMVY--GRNLRGQEFGGMYCAILTVNSS 798
++ A ++ +CF P+VD SG +L+ ++VY G N +F A+L
Sbjct: 805 ---NAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDE 861
Query: 799 VVSAGILRVFGQEVAELPLVATSKINHGKGYFQLLFACIEKLLS-----FLRVKSIVL-- 851
+++ +R+ G ++AE+P + T + +G + L IE ++ FL + ++L
Sbjct: 862 IIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESFVAYFSQMFLAISEVLLDV 921
Query: 852 ------PAA-EEAESIWTDKFGFKKI-DPELLSIYRKRCSQLVTFKGTSMLQKRVPACRI 903
PA + + FGF + D E +I K + LV F G ML K + +I
Sbjct: 922 WQFCCYPACFGDGPFCFFSGFGFAPVNDSEKKTI--KNLNLLV-FPGVDMLGKSLVKEKI 978
Query: 904 GSSSTDS 910
S S
Sbjct: 979 TDSVVSS 985
Score = 85 (35.0 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 47/176 (26%), Positives = 72/176 (40%)
Query: 2 KRELDYELAGSLDETSTQSLPQAGIQASDCVKAACENV-RCKRFKVTKVNGFIVYSRVKR 60
++ D + S+++ S + G + V ENV K K ++ RV R
Sbjct: 7 QKGFDLNVCASIEDFSESDIKAEG-ETDSLVDGNVENVIEIKDKKKVIEREILITRRVLR 65
Query: 61 SRFSNSDDLLEDDVIDKRINSK---IHEGRINKVVKNVLNENGILESVVEEENQLVQMTV 117
S S + DL+ D K + K + G VK + + + +S+V EE +
Sbjct: 66 SG-SVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECV-KSLVPEEIRGDDFRS 123
Query: 118 ENVIEETVKGKKAPICKEEPISKVECFPRKEGGSEVS--NGLNKKCLKRPSAMKPK 171
E +E K ++ KEE + + PRK G S S NGL C R S K K
Sbjct: 124 EVKVES--KDDRSDDGKEEKVQRKRGRPRKFGMSSQSDDNGLISNCKLRTSLGKKK 177
Score = 82 (33.9 bits), Expect = 6.2e-14, Sum P(3) = 6.2e-14
Identities = 20/84 (23%), Positives = 35/84 (41%)
Query: 551 CCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMF-ERKRFLQHDANAVEAGRVSGVD 609
CC+ PS F H C + P G WYC C F E+ +H+ + + + +
Sbjct: 664 CCDG--CPSTF--HQSCLDIKKFPSGAWYCYNCSCKFCEKDEAAKHETSTLPS-----LS 714
Query: 610 SVEQITKRCIRIVKNLEAELSGCL 633
S ++C + + A+ C+
Sbjct: 715 SCRLCEEKCSKHYPHTLADHQACI 738
Score = 78 (32.5 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 650 ILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCS 688
++ CD C FH CL D+++ P G W+C +CS
Sbjct: 662 LICCDGCPSTFHQSCL------DIKKFPSGAWYC-YNCS 693
Score = 66 (28.3 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 537 LLEGYKNGLGIICHCCNSEVSPSQFEAHA 565
LLEG GI C+CC+ S FE HA
Sbjct: 572 LLEGIITKEGIRCNCCDEVFSVLDFEVHA 600
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 549 CHCCNSEVS---PSQFEAHAECASLSSIPQG----DWYC-KYCQNMFE 588
C C + S P H C + G D +C KYCQ +FE
Sbjct: 716 CRLCEEKCSKHYPHTLADHQACINQDGTVPGERSTDSFCGKYCQELFE 763
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 30/105 (28%), Positives = 38/105 (36%)
Query: 271 CNGC-RVIPPSKFEIHACKQYRRASQYICFENGKSLLEVLR-ACRSVPLPMLKATLQSAL 328
CN C V FE+HA + + + E G SLL+ L + LK
Sbjct: 584 CNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESMNKQSESQLKGYHFVDF 643
Query: 329 SSLPEEKSFACVRC-KGTFPITCVGKTGPGPLCNSCVKSKK-PQG 371
S + C C G I C G P SC+ KK P G
Sbjct: 644 GS-GDPNDDTCGICGDGGDLICCDGC--PSTFHQSCLDIKKFPSG 685
Score = 47 (21.6 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 670 MADLRELPKGKWFCCMDCSRINSVLQNLLVQE 701
M D +P CMDC + + +L+ ++ +E
Sbjct: 549 MIDSTIVPLNGKVQCMDCKKTDILLEGIITKE 580
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHV 662
C+ C+ D G + + C+ C+ F V
Sbjct: 563 CMDCKKTDILLEGIITKEGIRCNCCDEVFSV 593
>TAIR|locus:2168088 [details] [associations]
symbol:AT5G59830 "AT5G59830" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
EMBL:CP002688 IPI:IPI00541231 RefSeq:NP_200791.2 RefSeq:NP_974964.1
UniGene:At.29202 UniGene:At.29203 EnsemblPlants:AT5G59830.1
EnsemblPlants:AT5G59830.2 GeneID:836104 KEGG:ath:AT5G59830
OMA:FQAATRE Uniprot:F4JXC7
Length = 425
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/173 (27%), Positives = 81/173 (46%)
Query: 166 SAMKPKVEPVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSPKKNLELKMSKKISLNKKP 225
S ++ + ++++ Q G S ++ + +A+ S + PK E K SKK + P
Sbjct: 232 SYVQDPIGTLDIVYDQETGSSQTSSGVVSEQQVAKPSLGSLPKTKAEAKSSKKEASTSFP 291
Query: 226 MTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXXXXCSCSLCNGCRVIPPSKFEIH 285
V L TG+LDGV V Y + C C C+ +V+ FE H
Sbjct: 292 SNVRSLISTGMLDGVPVKY---VSVSREELRGVIKGSGYLCGCQTCDFTKVLNAYAFERH 348
Query: 286 A-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKATLQSALSSLPEEKSF 337
A CK + + +I FENGK++ ++++ R+ P +L +Q+ S +K+F
Sbjct: 349 AGCKT-KHPNNHIYFENGKTIYQIVQELRNTPESILFDVIQTVFGSPINQKAF 400
>TAIR|locus:2173179 [details] [associations]
symbol:AT5G13660 "AT5G13660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB006704 eggNOG:NOG12793
UniGene:At.32033 UniGene:At.66715 IPI:IPI00892118
RefSeq:NP_001119218.1 EnsemblPlants:AT5G13660.2 GeneID:831211
KEGG:ath:AT5G13660 TAIR:At5g13660 HOGENOM:HOG000064604 OMA:EQHANCK
PhylomeDB:B3H544 ProtClustDB:CLSN2702252 Genevestigator:B3H544
Uniprot:B3H544
Length = 537
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/135 (31%), Positives = 63/135 (46%)
Query: 204 LTSPKKNLELKMSKKISLNKKPMTVTELFETGLLDGVSVVYMGGIKFQASXXXXXXXXXX 263
L PK + K +KK S N P V L TG+ DGV+V Y + Q +
Sbjct: 379 LLVPKIK-DTKTAKKGSTNTFPSNVKSLLSTGIFDGVTVKYYSWSREQRNLKGMIKGTGY 437
Query: 264 XXCSCSLCNGCRVIPPSKFEIHA-CKQYRRASQYICFENGKSLLEVLRACRSVPLPMLKA 322
C C C +V+ +FE HA CK + + +I FENGK++ V++ ++ P L
Sbjct: 438 L-CGCGNCKLNKVLNAYEFEQHANCKT-KHPNNHIYFENGKTIYGVVQELKNTPQEKLFD 495
Query: 323 TLQSALSSLPEEKSF 337
+Q+ S K+F
Sbjct: 496 AIQNVTGSDINHKNF 510
>MGI|MGI:109529 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 MGI:MGI:109529
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006915
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
GeneTree:ENSGT00530000063194 CTD:5977 KO:K13196 ChiTaRS:DPF2
EMBL:U43921 EMBL:AF108134 EMBL:AK004812 EMBL:AK138047 EMBL:AK144106
EMBL:AK144848 EMBL:AK144954 EMBL:BC007188 EMBL:BC012709 EMBL:U10435
IPI:IPI00117727 RefSeq:NP_035392.1 UniGene:Mm.2651
ProteinModelPortal:Q61103 SMR:Q61103 DIP:DIP-59247N IntAct:Q61103
STRING:Q61103 PhosphoSite:Q61103 PaxDb:Q61103 PRIDE:Q61103
Ensembl:ENSMUST00000136983 GeneID:19708 KEGG:mmu:19708
UCSC:uc008gfw.2 NextBio:297086 Bgee:Q61103 CleanEx:MM_DPF2
Genevestigator:Q61103 GermOnline:ENSMUSG00000024826 Uniprot:Q61103
Length = 391
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 57/255 (22%), Positives = 102/255 (40%)
Query: 465 SSQSQRQRKITKKSKKTVLISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLP 523
S+ R+R I L + +E +P KS+ ++ ++L + ++ P
Sbjct: 149 SNSRARKRIIEPDDFLDDLDDEDYEEDTPKRRGKGKSKSKGVSSARKKLDASILEDRDKP 208
Query: 524 DGTEVGYYACGQKLLEGYKNGLGIICHCCNSEVS------------PSQFEAHAECASLS 571
++ CG++ YKN G+ H +S ++ P+ +E
Sbjct: 209 YACDI----CGKR----YKNRPGLSYHYAHSHLAEEEGEDKEDSRPPTPVSQRSEEQKSK 260
Query: 572 SIPQG----DWYCKYC--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKN 624
P G + YC +C + +K + + + GR SG S Q T + VK
Sbjct: 261 KGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKT 319
Query: 625 LEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC- 683
+ C+ C+ C+ + +L CD C+R +H+ CL + E P+G W C
Sbjct: 320 YRWQ---CIECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCH 372
Query: 684 -CMDCSRIN-SVLQN 696
C+D + S+ QN
Sbjct: 373 LCLDLLKEKASIYQN 387
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 109 (43.4 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 29/95 (30%), Positives = 41/95 (43%)
Query: 635 CRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMD---CSR 689
C+ C P ILLCD C+ +H CL+ M +P G+WFC C C +
Sbjct: 695 CKKCGLPNH---PELILLCDSCDSGYHTACLRPPLMI----IPDGEWFCPPCQHKLLCEK 747
Query: 690 INSVLQNLLVQEAEKLPEFHLNAIKKYAGNSLETV 724
+ LQ+L V +K Y G S+E +
Sbjct: 748 LEEQLQDLDVALKKKERAERRKERLVYVGISIENI 782
Score = 74 (31.1 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 41/147 (27%), Positives = 65/147 (44%)
Query: 89 NKVVKNVLNENGILESVVEEENQLVQMTVENVIEETVKGKKAPICKEEPISKVECFPRKE 148
N+ NVL E + + E+E +LV++ V +E K P +E+ I K E KE
Sbjct: 65 NRSTANVLEETTVKKEK-EDEKELVKLPVIVKLE-----KPLPENEEKKIIKEESDSFKE 118
Query: 149 GGSEVSNGLNKKCLKRPSAMKPKVE-PVEVLVTQSEGFGNESMSLIEVEAIAEGSALTSP 207
+ + K+C P K +E PV + E FG S E I E S T
Sbjct: 119 NVKPIKVEV-KECRADPKDTKSSMEKPVAQEPERIE-FGGNIKSSHE---ITEKS--TEE 171
Query: 208 KKNLELKMSKKISLNKKPMTVTELFET 234
+ L+ KI L K+ + +++ F++
Sbjct: 172 TEKLKNDQQAKIPLKKREIKLSDDFDS 198
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 361 NSCVKSKKPQGTMTYTTGIRIR 382
NS V KP+G + +T G R R
Sbjct: 632 NSKVSKVKPKGKVRWT-GSRTR 652
>RGD|1311699 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 RGD:1311699 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:CH473953 CTD:5977 KO:K13196
RefSeq:NP_001101986.1 UniGene:Rn.17281 PRIDE:G3V8U3
Ensembl:ENSRNOT00000028363 GeneID:361711 KEGG:rno:361711
NextBio:677357 Uniprot:G3V8U3
Length = 391
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 53/237 (22%), Positives = 96/237 (40%)
Query: 483 LISKPFENASPPLSFPNKSRWN-ITPKDQRLHKLVFDESGLPDGTEVGYYACGQKLLEGY 541
L + +E +P KS+ ++ ++L + ++ P ++ CG++ Y
Sbjct: 167 LDDEDYEEDTPKRRGKGKSKSKGVSSARKKLDASILEDRDKPYACDI----CGKR----Y 218
Query: 542 KNGLGIICHCCNSEVS------------PSQFEAHAECASLSSIPQG----DWYCKYC-- 583
KN G+ H +S ++ P+ +E P G + YC +C
Sbjct: 219 KNRPGLSYHYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLG 278
Query: 584 QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSK 642
+ +K + + + GR SG S Q T + VK + C+ C+ C+
Sbjct: 279 DSKINKKTGQPEELVSCSDCGR-SGHPSCLQFTPVMMAAVKTYRWQ---CIECKCCNLCG 334
Query: 643 SGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFC--CMDCSRIN-SVLQN 696
+ +L CD C+R +H+ CL + E P+G W C C+D + S+ QN
Sbjct: 335 TSENDDQLLFCDDCDRGYHMYCLTP----SMSEPPEGSWSCHLCLDLLKEKASIYQN 387
>ZFIN|ZDB-GENE-041014-190 [details] [associations]
symbol:dpf3 "D4, zinc and double PHD fingers,
family 3" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IMP] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA;ISS] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
ZFIN:ZDB-GENE-041014-190 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016514
GO:GO:0055008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0042393
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:8110
EMBL:EU245032 EMBL:BX255881 IPI:IPI00488271 RefSeq:NP_001104639.1
UniGene:Dr.81131 ProteinModelPortal:A9LMC0 STRING:A9LMC0
Ensembl:ENSDART00000123387 GeneID:562738 KEGG:dre:562738
InParanoid:Q5RIJ2 OMA:AEVEPRS OrthoDB:EOG49KFR1 NextBio:20884558
Bgee:A9LMC0 Uniprot:A9LMC0
Length = 391
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 37/137 (27%), Positives = 60/137 (43%)
Query: 558 PSQFEAHA-ECASLSSIPQGDWYCKYC--QNMFERKRFLQHD-ANAVEAGRVSGVDSVEQ 613
P E H + A SI D YC +C + RK + + + GR SG S Q
Sbjct: 254 PVHHENHKPQKAPDGSIIPND-YCDFCLGDSGSNRKTGQAEELVSCSDCGR-SGHPSCLQ 311
Query: 614 ITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADL 673
T ++ V+ + + C+ C+ C + +L CD C+R +H+ CLK +
Sbjct: 312 FTDNMMQAVRTYQWQ---CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKP----PM 364
Query: 674 RELPKGKWFCCMDCSRI 690
+ P+G W C + C +
Sbjct: 365 TQPPEGSWSCHL-CQNL 380
>MGI|MGI:1352748 [details] [associations]
symbol:Dpf1 "D4, zinc and double PHD fingers family 1"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
MGI:MGI:1352748 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 CTD:8193 HOVERGEN:HBG004475 InterPro:IPR025750
Pfam:PF14051 eggNOG:NOG271547 HOGENOM:HOG000217918
OrthoDB:EOG4T4CX1 EMBL:U48238 EMBL:U48239 EMBL:AF108133
IPI:IPI00134511 IPI:IPI00227453 IPI:IPI00227454 RefSeq:NP_038902.1
UniGene:Mm.101885 UniGene:Mm.453136 UniGene:Mm.453137
ProteinModelPortal:Q9QX66 SMR:Q9QX66 STRING:Q9QX66
PhosphoSite:Q9QX66 PRIDE:Q9QX66 Ensembl:ENSMUST00000049977
Ensembl:ENSMUST00000065181 GeneID:29861 KEGG:mmu:29861
GeneTree:ENSGT00530000063194 NextBio:307066 Bgee:Q9QX66
CleanEx:MM_DPF1 Genevestigator:Q9QX66 GermOnline:ENSMUSG00000030584
Uniprot:Q9QX66
Length = 387
Score = 120 (47.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 573 IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGC 632
IP G YC +C ++ + + + GR SG S Q T V+ + C
Sbjct: 269 IPNG--YCDFCLGGSKKTGCPEDLISCADCGR-SGHPSCLQFTVNMTAAVRTYRWQ---C 322
Query: 633 LLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 689
+ C+ C + +L CD C+R +H+ CL MA E P+G W C + C R
Sbjct: 323 IECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSP-PMA---EPPEGSWSCHL-CLR 374
Score = 44 (20.5 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 533 CGQKLLEGYKNGLGIICHCCNSEVSPSQFEAHAE 566
CG++ YKN G+ H ++ ++ + E H E
Sbjct: 200 CGKR----YKNRPGLSYHYTHTHLAEEEGEEHTE 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 920 884 0.00086 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 622 (66 KB)
Total size of DFA: 425 KB (2202 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.01u 0.76s 77.77t Elapsed: 00:00:05
Total cpu time: 77.02u 0.76s 77.78t Elapsed: 00:00:05
Start: Tue May 21 02:18:36 2013 End: Tue May 21 02:18:41 2013