Query 002450
Match_columns 920
No_of_seqs 323 out of 938
Neff 4.4
Searched_HMMs 29240
Date Tue Mar 26 17:24:19 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002450.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1173-1177//hhsearch_pdb/002450hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kwj_A Zinc finger protein DPF 1.0 1 1 126.1 3.9 86 543-692 20-110 (114)
2 3v43_A Histone acetyltransfera 1.0 1 1 119.6 3.6 85 542-689 22-111 (112)
3 2ysm_A Myeloid/lymphoid or mix 1.0 1 1 112.9 5.5 82 544-689 20-103 (111)
4 4gne_A Histone-lysine N-methyl 1.0 1 1 92.0 4.7 76 544-685 25-100 (107)
5 3ask_A E3 ubiquitin-protein li 1.0 1 1 90.7 4.6 48 631-689 176-224 (226)
6 2lbm_A Transcriptional regulat 1.0 1 1 88.0 3.7 100 539-688 9-115 (142)
7 3shb_A E3 ubiquitin-protein li 1.0 1 1 85.4 4.1 47 632-689 29-76 (77)
8 3u5n_A E3 ubiquitin-protein li 1.0 1 1 83.6 3.7 50 627-690 5-54 (207)
9 3asl_A E3 ubiquitin-protein li 1.0 1 1 82.6 4.2 47 631-688 20-67 (70)
10 2e6s_A E3 ubiquitin-protein li 1.0 1 1 82.1 6.2 47 631-688 28-75 (77)
No 1
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=1.00 E-value=1 Score=126.06 Aligned_cols=86 Identities=28% Similarity=0.772 Sum_probs=73.2
Q ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCCC-----CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 18982018779866743000001124457-----8899985581100020000001222013230445788806677655
Q 002450 543 NGLGIICHCCNSEVSPSQFEAHAECASLS-----SIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKR 617 (920)
Q Consensus 543 tg~GI~CdCCn~evsPS~FEaHA~CL~Le-----sIPsGdW~Cp~C~~~f~re~~~~~n~Na~aag~i~gvD~~e~i~~R 617 (920)
.++.|.|+.| |+.| |..|+++. .+|++.|+|+.|.
T Consensus 20 ~~~Li~C~~C-----~~~~--H~~Cl~~~~~~~~~~~~~~W~C~~C~--------------------------------- 59 (114)
T 2kwj_A 20 PEELVSCADC-----GRSG--HPTCLQFTLNMTEAVKTYKWQCIECK--------------------------------- 59 (114)
T ss_dssp CCCCEECSSS-----CCEE--CTTTTTCCHHHHHHHHHTTCCCGGGC---------------------------------
T ss_pred CCCCEEECCC-----CCCC--CHHHCCCHHHHHHCCCCCCCCCCCCC---------------------------------
T ss_conf 9998692989-----9832--32138784664311687751756627---------------------------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHH
Q ss_conf 433201343356556126688888889899942534778985464557657677557999963031676353789
Q 002450 618 CIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRINS 692 (920)
Q Consensus 618 C~R~vk~~e~e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~I~~ 692 (920)
.|.+|++.+ +++.||+||+|+++||+.||+| +|.++|+++||| +.|...+.
T Consensus 60 -------------~C~~C~~~~------~~~~ll~Cd~C~~~yH~~Cl~p----pl~~~P~g~W~C-~~C~~~~~ 110 (114)
T 2kwj_A 60 -------------SCILCGTSE------NDDQLLFCDDCDRGYHMYCLNP----PVAEPPEGSWSC-HLCWELLK 110 (114)
T ss_dssp -------------CCTTTTCCT------TTTTEEECSSSCCEEETTTSSS----CCSSCCSSCCCC-HHHHHHHH
T ss_pred -------------CCCCCCCCC------CCCCEEECCCCCCCCCCCCCCC----CCCCCCCCCEEC-CCCCCHHH
T ss_conf -------------337563468------8874577489894102504598----746788978199-24103442
No 2
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=1.00 E-value=1 Score=119.62 Aligned_cols=85 Identities=32% Similarity=0.770 Sum_probs=71.0
Q ss_pred ECCCCCCCCCCCCCCCCCHHCCCCCCCCC-----CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHH
Q ss_conf 21898201877986674300000112445-----7889998558110002000000122201323044578880667765
Q 002450 542 KNGLGIICHCCNSEVSPSQFEAHAECASL-----SSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITK 616 (920)
Q Consensus 542 itg~GI~CdCCn~evsPS~FEaHA~CL~L-----esIPsGdW~Cp~C~~~f~re~~~~~n~Na~aag~i~gvD~~e~i~~ 616 (920)
..++.|.|+.| ++.| |..|+++ ..+|.++|+|+.|+
T Consensus 22 ~~~~Ll~C~~C-----~~~~--H~~Cl~~~~~~~~~~~~~~W~C~~C~-------------------------------- 62 (112)
T 3v43_A 22 KPEELISCADC-----GNSG--HPSCLKFSPELTVRVKALRWQCIECK-------------------------------- 62 (112)
T ss_dssp CCCCCEECTTT-----CCEE--CHHHHTCCHHHHHHHHTSCCCCTTTC--------------------------------
T ss_pred CCHHCEEHHHC-----CCCC--CCCHHCCCHHHHHHHHCCCCCCCCCC--------------------------------
T ss_conf 91116375344-----9988--97035388899987542465301177--------------------------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf 5433201343356556126688888889899942534778985464557657677557999963031676353
Q 002450 617 RCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 689 (920)
Q Consensus 617 RC~R~vk~~e~e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~ 689 (920)
.|.+|++.+ .+++.+|+||+|+++||+.||+| +|.++|+++||| +.|+.
T Consensus 63 --------------~C~vC~~~~-----~~~~~ll~Cd~C~~~yH~~Cl~p----~l~~~P~~~W~C-~~C~~ 111 (112)
T 3v43_A 63 --------------TCSSCRDQG-----KNADNMLFCDSCDRGFHMECCDP----PLTRMPKGMWIC-QICRP 111 (112)
T ss_dssp --------------CBTTTCCCC-----CTTCCCEECTTTCCEECGGGCSS----CCSSCCSSCCCC-TTTSC
T ss_pred --------------CCCCCCCCC-----CCCCCEEECCCCCCEEECCCCCC----CCCCCCCCCEEC-CCCCC
T ss_conf --------------544666868-----88565687489989156635899----989899988579-78789
No 3
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=112.91 Aligned_cols=82 Identities=24% Similarity=0.804 Sum_probs=67.7
Q ss_pred CCCCCCCCCCCCCCCCHHCCCCCCCCCCC--CCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89820187798667430000011244578--8999855811000200000012220132304457888066776554332
Q 002450 544 GLGIICHCCNSEVSPSQFEAHAECASLSS--IPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRI 621 (920)
Q Consensus 544 g~GI~CdCCn~evsPS~FEaHA~CL~Les--IPsGdW~Cp~C~~~f~re~~~~~n~Na~aag~i~gvD~~e~i~~RC~R~ 621 (920)
.+.|.|+.| |+.| |..|+++.. +|++.|+|+.|.
T Consensus 20 ~~ll~C~~C-----~~~~--H~~Cl~~~~~~~~~~~W~C~~C~------------------------------------- 55 (111)
T 2ysm_A 20 LDQFFCTTC-----GQHY--HGMCLDIAVTPLKRAGWQCPECK------------------------------------- 55 (111)
T ss_dssp TTSEECSSS-----CCEE--CTTTTTCCCCTTTSTTCCCTTTC-------------------------------------
T ss_pred CCCEECCCC-----CCCC--CHHHHCCCCCCCCCCCCCCCCCC-------------------------------------
T ss_conf 588599999-----9773--96770886554456686587678-------------------------------------
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHH
Q ss_conf 01343356556126688888889899942534778985464557657677557999963031676353
Q 002450 622 VKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSR 689 (920)
Q Consensus 622 vk~~e~e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~ 689 (920)
.|.+|++.+ ++..+|.||+|+++||+.||+| +++++|+++||| +.|..
T Consensus 56 ---------~C~~C~~~~------~~~~ll~Cd~C~~~yH~~Cl~p----pl~~~P~g~W~C-~~C~~ 103 (111)
T 2ysm_A 56 ---------VCQNCKQSG------EDSKMLVCDTCDKGYHTFCLQP----VMKSVPTNGWKC-KNCRI 103 (111)
T ss_dssp ---------CCTTTCCCS------CCTTEEECSSSCCEEEGGGSSS----CCSSCCSSCCCC-HHHHC
T ss_pred ---------CCCCCCCCC------CCCCEEECCCCCCHHHHHHCCC----CCCCCCCCCCCC-CCCCC
T ss_conf ---------262347658------9877658999980886986587----656688988299-28827
No 4
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=1.00 E-value=1 Score=91.97 Aligned_cols=76 Identities=26% Similarity=0.639 Sum_probs=61.4
Q ss_pred CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 89820187798667430000011244578899985581100020000001222013230445788806677655433201
Q 002450 544 GLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRCIRIVK 623 (920)
Q Consensus 544 g~GI~CdCCn~evsPS~FEaHA~CL~LesIPsGdW~Cp~C~~~f~re~~~~~n~Na~aag~i~gvD~~e~i~~RC~R~vk 623 (920)
|+.|+|+. ..||+.| |..|++|..+|+|+||||.|.
T Consensus 25 G~ll~CD~---~~Cp~~f--H~~Cl~L~~~P~g~W~Cp~c~--------------------------------------- 60 (107)
T 4gne_A 25 GELVMCDK---KDCPKAY--HLLCLNLTQPPYGKWECPWHQ--------------------------------------- 60 (107)
T ss_dssp SEEEECCS---TTCCCEE--CTGGGTCSSCCSSCCCCGGGB---------------------------------------
T ss_pred CCEEEECC---CCCCCCC--CCCCCCCCCCCCCCEECCCCC---------------------------------------
T ss_conf 84757799---9999265--225186875799888898999---------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 34335655612668888888989994253477898546455765767755799996303167
Q 002450 624 NLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCM 685 (920)
Q Consensus 624 ~~e~e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~ 685 (920)
|.+|++. ..+.|..|+++||..|+.+ .|...+...|+|+.
T Consensus 61 --------C~~C~k~----------~~~~C~~Cp~sfC~~c~~g----~l~~~~~~~~~c~~ 100 (107)
T 4gne_A 61 --------CDECSSA----------AVSFCEFCPHSFCKDHEKG----ALVPSALEGRLCCS 100 (107)
T ss_dssp --------CTTTCSB----------CCEECSSSSCEECTTTCTT----SCEECTTTTCEECT
T ss_pred --------CCCCCCC----------CCCCCCCCCCCHHHHCCCC----CCEECCCCCCEECC
T ss_conf --------8817798----------9867477871011211587----31102788966667
No 5
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=90.68 Aligned_cols=48 Identities=38% Similarity=1.083 Sum_probs=41.9
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEECCCCHH
Q ss_conf 5612668888888989994253477898546455765767755799996-3031676353
Q 002450 631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG-KWFCCMDCSR 689 (920)
Q Consensus 631 ~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g-~WFC~~~C~~ 689 (920)
.|.+|++.+ +++.+|+||.|+++||+.||+| ||+.+|+| +||| +.|..
T Consensus 176 ~C~vC~~~~------~~~~lL~CD~C~~~yH~~CL~P----PL~~vP~G~~W~C-p~C~~ 224 (226)
T 3ask_A 176 ACHLCGGRQ------DPDKQLMCDECDMAFHIYCLDP----PLSSVPSEDEWYC-PECRN 224 (226)
T ss_dssp SCSSSCCCC------C--CCEECSSSCCEECSCC--C----CCCSCCSSSCCCC-GGGC-
T ss_pred CCCCCCCCC------CCCCEEECCCCCCCEECCCCCC----CCCCCCCCCCCCC-CCCCC
T ss_conf 886889979------9987688389994100756788----7456989988789-38749
No 6
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=1.00 E-value=1 Score=88.03 Aligned_cols=100 Identities=19% Similarity=0.490 Sum_probs=69.3
Q ss_pred CCEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 24121898201877986674300000112445788999855811000200000012220132304457888066776554
Q 002450 539 EGYKNGLGIICHCCNSEVSPSQFEAHAECASLSSIPQGDWYCKYCQNMFERKRFLQHDANAVEAGRVSGVDSVEQITKRC 618 (920)
Q Consensus 539 ~G~itg~GI~CdCCn~evsPS~FEaHA~CL~LesIPsGdW~Cp~C~~~f~re~~~~~n~Na~aag~i~gvD~~e~i~~RC 618 (920)
+|+. ++|.|.+|+..++|+++ +.. ..-.--+-|.|+.|.+.|....+.
T Consensus 9 ~~~~--~~i~Ct~Cg~~~~~~q~--~~~---~~HPll~v~~C~~C~~~y~~~~~~------------------------- 56 (142)
T 2lbm_A 9 DGLH--GIVSCTACGQQVNHFQK--DSI---YRHPSLQVLICKNCFKYYMSDDIS------------------------- 56 (142)
T ss_dssp SSCC--CCCBCTTTCSBSTTTCS--SSE---EEETTTTEEEEHHHHHHHHHSCCC-------------------------
T ss_pred CCCC--CCCEECCCCCCCCCCCC--CCH---HCCCCCCCCCCHHHHHHHHCCCCE-------------------------
T ss_conf 6775--79885489986565456--632---129875664247789887237813-------------------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-----C--CCCCCEEECCCCH
Q ss_conf 33201343356556126688888889899942534778985464557657677557-----9--9996303167635
Q 002450 619 IRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLR-----E--LPKGKWFCCMDCS 688 (920)
Q Consensus 619 ~R~vk~~e~e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~-----e--iP~g~WFC~~~C~ 688 (920)
.+.+...+.|.+|++ ++.++.||.|++.||..|+.+ ++. + .|.++|+| ..|.
T Consensus 57 ----~d~Dg~~d~C~vC~~---------GG~LlcCD~Cpr~Fh~~Cl~p----~l~~~~l~~i~~p~~~W~C-~~C~ 115 (142)
T 2lbm_A 57 ----RDSDGMDEQCRWCAE---------GGNLICCDFCHNAFCKKCILR----NLGRKELSTIMDENNQWYC-YICH 115 (142)
T ss_dssp ----BCTTSCBCSCSSSCC---------CSSEEECSSSCCEEEHHHHHH----HTCHHHHHHHHTSTTCCCC-TTTC
T ss_pred ----ECCCCCCCEECCCCC---------CCCEEECCCCCCEEEHHHCCC----CCCHHHHHHCCCCCCCCEE-ECCC
T ss_conf ----168888780000399---------984786899897312745488----8873666542468999882-1266
No 7
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=85.41 Aligned_cols=47 Identities=38% Similarity=1.097 Sum_probs=40.3
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEECCCCHH
Q ss_conf 6126688888889899942534778985464557657677557999963-031676353
Q 002450 632 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGK-WFCCMDCSR 689 (920)
Q Consensus 632 C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~-WFC~~~C~~ 689 (920)
|.+|++.+ +++.+|+||.|+++||+.||.| +|.++|+++ ||| +.|..
T Consensus 29 C~vC~~~~------d~~~ll~CD~C~~~yH~~Cl~P----pL~~~P~g~~W~C-~~C~~ 76 (77)
T 3shb_A 29 CHLCGGRQ------DPDKQLMCDECDMAFHIYCLDP----PLSSVPSEDEWYC-PECRN 76 (77)
T ss_dssp BTTTCCCS------CGGGEEECTTTCCEEETTTSSS----CCSSCCSSSCCCC-TTTC-
T ss_pred CCCCCCCC------CCCCEEEECCCCCCCCCCCCCC----CCCCCCCCCCEEC-CCCCC
T ss_conf 78169978------9861068078998017514797----5247889994199-47165
No 8
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=1.00 E-value=1 Score=83.60 Aligned_cols=50 Identities=30% Similarity=0.846 Sum_probs=43.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHH
Q ss_conf 3565561266888888898999425347789854645576576775579999630316763537
Q 002450 627 AELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCCMDCSRI 690 (920)
Q Consensus 627 ~e~~~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g~WFC~~~C~~I 690 (920)
.+.+.|.+|++ ++.+++||.|+++||..|+.| ++..+|.|+||| +.|...
T Consensus 5 ~~~~~C~~C~~---------~g~ll~Cd~C~~~~H~~Cl~p----~l~~~p~~~W~C-~~C~~~ 54 (207)
T 3u5n_A 5 PNEDWCAVCQN---------GGDLLCCEKCPKVFHLTCHVP----TLLSFPSGDWIC-TFCRDI 54 (207)
T ss_dssp SSCSSBTTTCC---------CEEEEECSSSSCEECTTTSSS----CCSSCCSSCCCC-TTTSCS
T ss_pred CCCCCCCCCCC---------CCCEEECCCCCCCCCCCCCCC----CCCCCCCCCEEE-CCEECC
T ss_conf 88898988899---------993677699998438715899----988889988786-842686
No 9
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=1.00 E-value=1 Score=82.61 Aligned_cols=47 Identities=38% Similarity=1.104 Sum_probs=40.5
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEECCCCH
Q ss_conf 5612668888888989994253477898546455765767755799996-303167635
Q 002450 631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG-KWFCCMDCS 688 (920)
Q Consensus 631 ~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g-~WFC~~~C~ 688 (920)
.|.+|++.+ +++.||+||.|+++||+.||+| +|+++|+| +||| +.|.
T Consensus 20 ~C~~C~~~~------~~~~ll~CD~C~~~yH~~Cl~P----pl~~~P~g~~W~C-~~C~ 67 (70)
T 3asl_A 20 ACHLCGGRQ------DPDKQLMCDECDMAFHIYCLDP----PLSSVPSEDEWYC-PECR 67 (70)
T ss_dssp SBTTTCCCS------CGGGEEECTTTCCEEEGGGSSS----CCSSCCSSSCCCC-TTTS
T ss_pred CCCCCCCCC------CCCCEEECCCCCCCEECCCCCC----CCCCCCCCCCCCC-CCCC
T ss_conf 985779959------9987788589997461545798----7577877988579-2863
No 10
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=82.13 Aligned_cols=47 Identities=36% Similarity=1.030 Sum_probs=41.3
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEECCCCH
Q ss_conf 5612668888888989994253477898546455765767755799996-303167635
Q 002450 631 GCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG-KWFCCMDCS 688 (920)
Q Consensus 631 ~C~VC~~~d~~~Sgf~~~~ILlCDQCer~YHv~CL~p~~~~~L~eiP~g-~WFC~~~C~ 688 (920)
.|.+|+..+ +++.||+||.|+++||+.||+| +|+.+|+| +||| +.|.
T Consensus 28 ~C~vC~~~~------~~~~ll~CD~C~~~yH~~Cl~P----pl~~~P~g~~W~C-~~C~ 75 (77)
T 2e6s_A 28 SCRVCGGKH------EPNMQLLCDECNVAYHIYCLNP----PLDKVPEEEYWYC-PSCK 75 (77)
T ss_dssp SCSSSCCCC------CSTTEEECSSSCCEEETTSSSS----CCSSCCCSSCCCC-TTTC
T ss_pred CCCCCCCCC------CCCCEEECCCCCCCCCCCCCCC----CCCCCCCCCCCCC-CCCC
T ss_conf 882769969------9998788489996000635688----7467887987389-1821
Done!