Query 002453
Match_columns 920
No_of_seqs 193 out of 1128
Neff 9.5
Searched_HMMs 29240
Date Tue Mar 26 15:49:03 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002453.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1178-1181//hhsearch_pdb/002453hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x1g_F Cadmus; transport prote 1.0 1 1 762.1 64.2 852 1-914 1-906 (971)
2 3ibv_A Exportin-T; karyopherin 1.0 1 1 737.4 71.5 792 3-856 3-874 (980)
3 4hat_C Exportin-1; heat repeat 1.0 1 1 718.2 69.6 835 3-913 13-928 (1023)
4 2x19_B Importin-13; nuclear tr 1.0 1 1 714.2 80.1 839 5-913 22-893 (963)
5 3gjx_A Exportin-1; transport, 1.0 1 1 691.7 67.3 842 6-913 27-952 (1073)
6 3m1i_C Exportin-1; heat repeat 1.0 1 1 615.7 74.2 836 2-914 12-929 (1049)
7 3a6p_A Exportin-5; exportin-5, 1.0 1 1 510.5 60.3 776 6-833 10-928 (1204)
8 1wa5_C Importin alpha RE-expor 1.0 1 1 312.9 63.0 720 3-852 1-791 (960)
9 4fdd_A Transportin-1; heat rep 1.0 1 1 285.8 63.6 763 4-905 10-846 (852)
10 2bpt_A Importin beta-1 subunit 1.0 1 1 267.5 65.3 717 3-854 1-765 (861)
No 1
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=762.15 Aligned_cols=852 Identities=16% Similarity=0.256 Sum_probs=686.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98518999999999960399948799999999996038699999999643598888752469889999999996036677
Q 002453 1 MQMDLQIKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYY 80 (920)
Q Consensus 1 ~~~~~~~~v~~ai~~ly~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~ 80 (920)
|+.-..++++++++++| ++|++.|++|++||++||++|++|.+|.++|... .+.++|||||++|+++|+++|..
T Consensus 1 m~~~d~~~l~~~l~~~~-~~d~~~r~~A~~~L~~~~~~p~~w~~~~~lL~~~-----~~~~vr~~aa~~L~~~i~~~w~~ 74 (971)
T 2x1g_F 1 MEPIDIARLEEAVVSFY-RSNSQNQAITHEWLTDAEASPQAWQFSWQLMQLG-----KSQEVQFFGAITLHSKLMKHWHE 74 (971)
T ss_dssp ----------CTHHHHH-TSTTTC----CHHHHHTTTSTHHHHHHHHHTCTT-----SCHHHHHHHHHHHHHHHHHCGGG
T ss_pred CCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHCCHHH
T ss_conf 97655999999999876-9999999999999999874979899999998359-----94989999999999999715864
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHCCC----CCCHHHHHHHHHHH
Q ss_conf 8936799999999999997068986999999999999994602-678649999999410248----88514899999843
Q 002453 81 LQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAV-EHGKPIEKLFYSLQNLQS----QDNGNMAVLEMLTV 155 (920)
Q Consensus 81 l~~~~~~~Lr~~Ll~~l~~~~~~~~~v~~kL~~aLa~l~~~~~-~W~~~i~~l~~~l~~~~~----~~~~~~~~L~~L~~ 155 (920)
+|++++..+|+.+++++.....+|+.|++|+|.+++.++.+.. .||+++.+++..++++.. ++......+++|+.
T Consensus 75 l~~~~~~~ir~~ll~~l~~~~~~~~~vr~kl~~~la~i~~~~~p~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~~l~iL~~ 154 (971)
T 2x1g_F 75 VPPENREELKQKILESIVRFAGGPKIVLNRLCISLGAYIVHMLGEWPGAIEEVINTFQNQRMPNVSADVQLWIMLEVLTA 154 (971)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTCC------HHHHHHHHTC----CHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999986799878999999999999997062243799999999715334567878899999999998
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 12100013655568997789999999974035999999996610038999763146489999999999970456656710
Q 002453 156 LPEEVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQG 235 (920)
Q Consensus 156 l~eE~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi~~~~~~~i~~~ 235 (920)
++||+...+ +..+|..+++.+....+.|++++.+++....+.+.......+...+++|+.+|+.++ |+|.+
T Consensus 155 l~EEi~~~~------~~~~r~~~~~~l~~~~~~vl~ll~~~l~~~~~~~~~~~~~~~~~~al~~l~~~~~~~---~ip~~ 225 (971)
T 2x1g_F 155 IPEEAQVIH------TSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNI---GYTIE 225 (971)
T ss_dssp HHHHHHHCC------CSSCHHHHHHHHHTTHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHS---CCCGG
T ss_pred HHHHHHCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC---CCCCC
T ss_conf 599882468------578999999999987999999999998554678888642367999999999998257---83865
Q ss_pred HHCCCCHHHHHHHHC------------------CCCCCHHHHHHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHCHH
Q ss_conf 110201499999741------------------799928999999999972357-----936999864132376400110
Q 002453 236 SLAAHPLLNFVFNSL------------------QVQSSFDVAIEVLVELVGRHE-----GLPQALLCRVPFLKELLLLPA 292 (920)
Q Consensus 236 ~~~~~~ll~~~~~~L------------------~~~~~~~~a~~~l~eii~~~~-----~~~~~l~~~l~~l~~~~~~~~ 292 (920)
..+++++.+|. | .+++.++.|++|+.++++..+ +....+++.++++.+.+. .+
T Consensus 226 --~~~~ll~~l~~-L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~ 301 (971)
T 2x1g_F 226 --GCVTITAVLLE-VVHKCYWPCIHAGDGCMTADENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEIT-KT 301 (971)
T ss_dssp --GHHHHHHHHHH-HHHHHHSSSCC---CCCCHHHHHHHHHHHHHHHHHHHCSGGGGCHHHHHHHHHHHHHHHHHHH-HH
T ss_pred --CCCCHHHHHHH-HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH-HH
T ss_conf --66319999986-435530232356655567677479999999999997680113208899999999998689999-99
Q ss_pred HCCCCH---HHHHHHHHHHHHHHHHHHHHHH----H----CCHHHHHHHHHHHHHCCCCC---CCCCHHHCCHHHHHHHH
Q ss_conf 027987---6890599999999786369998----1----79238999999982007888---87302230199999999
Q 002453 293 LTDGDE---KVIGGLACLMSEIGQAAPSLIV----E----ASPEALALADALLSCVAFPS---EDWEIADSTLQFWSTLA 358 (920)
Q Consensus 293 ~~~~d~---d~~~~l~~l~~~~~e~~~~~l~----~----~~~~~~~ll~~ll~~~~~p~---~d~~v~~~~~~FW~~l~ 358 (920)
+.++|. +...++|++++.+++.+...+. + .++.+..+++.++.++.+|| .+++++..+++||+.+.
T Consensus 302 ~~~~d~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~v~~~~l~fw~~l~ 381 (971)
T 2x1g_F 302 EWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQ 381 (971)
T ss_dssp HSSSSCSCSHHHHHHHHHHHHHHHHTHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHCSSCTTTTCTTHHHHHHHHHHHH
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 85656540689999999999999999999998731576535499999999999997588888863124587899999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 87601524554443433351198999999999974056899889988888885199999999999999998608458999
Q 002453 359 SYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGLVQFRMNLVELLVDICQLLRSATFIQ 438 (920)
Q Consensus 359 ~~l~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~k~~~p~~~~~~~~~~d~~d~f~~~R~~~~d~l~~~~~il~~~~~l~ 438 (920)
+.+.+++.+. ..+.....++|+|.+++.+++.|+.||+++..++|+.+|+++|.+||+.++|++.+++.++|. .++.
T Consensus 382 ~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~l~~~~~~p~~~~~~~~d~~e~~~f~~~R~~~~~~l~~~~~~~~~-~~l~ 458 (971)
T 2x1g_F 382 DEVFAMSNDE--QKHKCWEYIKPLYAHLTRILVRKSEQPDEKSLAKWSSDDLECFRCYRQDISDTFMYCYDVLND-YILE 458 (971)
T ss_dssp HHHHC---------CHHHHHHHHHHHHHHHHHHHHTSCCCTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHTTCTT-HHHH
T ss_pred HHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 9997413310--008999999999999999999986199962433567757999999999999999999999709-9999
Q ss_pred HHHHHH----HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf 998543----1599999980365689999984220135578655546899999983168-43655567899998899999
Q 002453 439 KVFFGS----WGSANVPIPWKEVETKLFALNVVSEVVLQEGQAFDFSVIMQLVAVLSAS-RSEELKGFMHIVYRSLADVI 513 (920)
Q Consensus 439 ~~~~~~----~~~~~~~~~W~~~Ea~L~~l~~iae~i~~~~~~~~l~~i~~ll~~l~~~-~~~~~~~~~~l~~~t~~~~i 513 (920)
.++..+ ......+.+|+.+||++|+++++++.+..+.. ..++.+++++..++.. +++ .+|.++ |+++
T Consensus 459 ~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~-~~l~~l~~~l~~l~~~d~~~------~vr~~a-~~~l 530 (971)
T 2x1g_F 459 ILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEK-RQIPRLMRVLAEIPYEKLNV------KLLGTA-LETM 530 (971)
T ss_dssp HHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC-------CHHHHHHHHHHHSCTTTSCH------HHHHHH-HHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHCCCCCCCH------HHHHHH-HHHH
T ss_conf 999999999973468987389999999999999835480334-77999999998567653678------999999-9999
Q ss_pred HHHHHHHHHCHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH-HHHHHCCCCHHHHHHHH
Q ss_conf 94368888563314999999998106571579999999999999310169974089999999-99972799956399999
Q 002453 514 GSYSKWISAFQTNARPLLLFLAAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIG-EALEKRHLPLEDEEEVV 592 (920)
Q Consensus 514 g~y~~wl~~~p~~L~~vl~~l~~~l~~~~v~~~Aa~al~~lc~~c~~~l~~~~~~~~l~~~~-~~l~~~~l~~~~~~~l~ 592 (920)
|+|++|+..||+++++++++++.++. |.++.+|+.||.+||++|+..+. ++++.+++.+ ..+.+..++.+++..++
T Consensus 531 ~~~~~~l~~~~~~l~~vl~~l~~~l~-~~v~~~A~~al~~l~~~~~~~l~--p~~~~ll~~l~~~l~~~~~~~~~~~~~~ 607 (971)
T 2x1g_F 531 GSYCNWLMENPAYIPPAINLLVRGLN-SSMSAQATLGLKELCRDCQLQLK--PYADPLLNACHASLNTGRMKNSDSVRLM 607 (971)
T ss_dssp HHTHHHHC----CHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHHCHHHHH--HHHHHHHHHHHHHHHSTTSCHHHHHHHH
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 98788886088989999999998748-58899999999999999888623--0079999999999727899928999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99999971699257899999998889999999464037999777795246777776677777521001334556788988
Q 002453 593 GAISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYTQILSSATRGLYRMGTVFSHLPVPLPTNPA 672 (920)
Q Consensus 593 eai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~~~~~~l~~~~~~~~~ 672 (920)
+++|.+++++|.++ ...++..++.|+++.++++.+.... ++.. ....+..++.++++++.+....+...+
T Consensus 608 ~ai~~i~~~~~~~~-~~~~~~~ll~~l~~~l~~~~~~~~~-----~~~~----~~~~~~~l~~L~~~~~~l~~~~~~~~~ 677 (971)
T 2x1g_F 608 FSIGKLMSLLRPEE-IPKYLDIIVSPCFEELQAICQADSK-----TPAA----RIRTIFRLNMISTLFSSLNTDVDEQAT 677 (971)
T ss_dssp HHHHHHHHTSCTTH-HHHHHHHHHHHHHHHHHHHHTC--------CHHH----HHHHHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHCCHHH-HHHHHHHHHHHHHHHHHHHHHCCCC-----CHHH----HHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999997299999-9999999998999999999856899-----8225----999999999999998416777685333
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf ---88608999996999999999732105428999999999999996524257639999999998553206753188789
Q 002453 673 ---GDDPIFALLRVFWPMLEKLFRSEHMENGNLSTAACRALSLAIQSSGQHFVTLLPQVLDCLSTNFVSFQNHECYIRTA 749 (920)
Q Consensus 673 ---~~~p~~~~~~~~~~~l~~i~~~~~~~~~~i~e~~c~~~~~~~~~l~~~~~p~l~~i~~~l~~~f~~~~~~~~~L~l~ 749 (920)
..+|+.++.+++||++..++. .+..+.+++|++|++++++++++|.++.|++|++++.+...|... +++|+|+++
T Consensus 678 ~~~~~~~~~~~~~~i~~~l~~~l~-~~~~~~~v~e~~~~~~~~~~~~~~~~~~p~l~~~~~~l~~~~~~~-~~~~~l~l~ 755 (971)
T 2x1g_F 678 DQPIVQPVLLVMQRTMPIFKRIAE-MWVEEIDVLEAACSAMKHAITNLRSSFQPMLQDLCLFIVASFQTR-CCAPTLEIS 755 (971)
T ss_dssp ------CCHHHHHTTHHHHHHHHH-HTTTCHHHHHHHHHHHHHHHHHHHC--CTHHHHHHHHHHHHCC---CCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC-CCHHHHHHH
T ss_conf 456788369999999999999998-643637899999999999998614404252789999999998668-834999999
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHH
Q ss_conf 999998058888742169999997566889985156--87887883699999999999965248887201240-499999
Q 002453 750 SVVIEEFGHKDEYGPLFVTTFERFSQAASVRALNSS--YICDQEPDLVEAYTNFASTFVRTSRKEVLAASGAL-LEVSFQ 826 (920)
Q Consensus 750 ~~li~~f~~~~~~~~~~~~l~~~l~~~~~~~~l~~~--~~~~~~pD~v~~~f~l~~~~l~~~p~~~~~s~~~~-l~~il~ 826 (920)
+.++..||.++.+.+.+..++..+..++ +..+.+. ..++++||++++||+|+.++++++|..++++ +. +..+++
T Consensus 756 ~~~i~~~~~~~~~~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~pd~~~~~f~ll~~~l~~~p~~~~~s--~~~l~~i~~ 832 (971)
T 2x1g_F 756 KTAIVMFFKDEGCKPLMQQLLREFIQHS-FKLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQVLEDK--TLAYDRLVF 832 (971)
T ss_dssp HHHHTTCCC-----HHHHHHHHHHHHHH-HHHHTSCTTTHHHHTHHHHHHHHHHHHHHHHSSGGGGGCT--TSCHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCC--CCCHHHHHH
T ss_conf 9999995889005899999999999999-9998606546776484489999999999998685998188--212899999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 99875136874689999999999996454311588999998307899999998201799999999953678411133369
Q 002453 827 KAAICCTAMHRGAALAAMSYLSCFLEECLASLLGYTTSIPEGSFNAMAIQVISHSGEGLVSNVVYALLGVSAMSRVNTSF 906 (920)
Q Consensus 827 ~~l~~l~~~e~~~~~a~~~Fl~~li~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~Lv~~ll~~~~g~~prs~l~~~~ 906 (920)
+++.+++.+|+++.+++++||+.+++.+.. .+.+++++.++|+.|+..++.+++|+.||+.+++++
T Consensus 833 ~~~~~l~~~~~~~~~s~~~fl~~~i~~~~~--------------~~~~~~~~~~~g~~l~~~l~~~~~~~~~~s~~~~~a 898 (971)
T 2x1g_F 833 YAQRGMTLPESGAIRNSIQFLTHFVMQSRN--------------HAHVTEVVLATGEQTLYTAMMCVGYLTPRSQVDKFA 898 (971)
T ss_dssp HHHHHHTSSCSSHHHHHHHHHHHHHHHHTT--------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGGGGH
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHCCCC--------------HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 999982878778999999999999860785--------------689999999967999999999756469756789999
Q ss_pred HHHHHHHH
Q ss_conf 99999995
Q 002453 907 NLKYAIFF 914 (920)
Q Consensus 907 eil~~l~~ 914 (920)
++|+++..
T Consensus 899 ~~l~~l~~ 906 (971)
T 2x1g_F 899 DILLAMNR 906 (971)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 2
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=1.00 E-value=1 Score=737.38 Aligned_cols=792 Identities=13% Similarity=0.131 Sum_probs=611.5
Q ss_pred CHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 518999999999960-3999487999999999960386999999996435988887524698899999999960366778
Q 002453 3 MDLQIKVAQAVHVLN-HDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYL 81 (920)
Q Consensus 3 ~~~~~~v~~ai~~ly-~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~l 81 (920)
|+. ++|++||+..| .++|++.|++|++||++||++|+||++|..+|.... ..+.++|||||+||++||+ .+
T Consensus 3 m~~-~~v~~Al~~~~~p~sd~~~r~~A~~~L~~~q~sp~aw~~~~~iL~~~~---~~~~~vr~fa~~~L~~~I~----~l 74 (980)
T 3ibv_A 3 MSA-QDVENAVEAALDPSVGPIIKQQATDFIGSLRSSSTGWKICHEIFSEKT---KYKPSTRLICLQTLSEKVR----EW 74 (980)
T ss_dssp CHH-HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCTT---TSCHHHHHHHHHHHHHHHH----HC
T ss_pred CCH-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHHHH----HC
T ss_conf 999-999999999848999999999999999998739459999999983799---9989999999999999987----58
Q ss_pred CHH----HHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCC-CHHHHHHHH
Q ss_conf 936----79999999999999706--8986999999999999994602--67864999999941024888-514899999
Q 002453 82 QSA----AKDALLNALLVAAKRFS--SGPPQLLTQICLALSALILRAV--EHGKPIEKLFYSLQNLQSQD-NGNMAVLEM 152 (920)
Q Consensus 82 ~~~----~~~~Lr~~Ll~~l~~~~--~~~~~v~~kL~~aLa~l~~~~~--~W~~~i~~l~~~l~~~~~~~-~~~~~~L~~ 152 (920)
+++ ++..||+.|++++.+.. .+|+.|+||||.+++.++.+.. .||+++.+++..++++ ++ .....+|++
T Consensus 75 ~~e~~~~~~~~lr~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p~~Wp~~i~~l~~~~~~~--~~~~~~~~~Lri 152 (980)
T 3ibv_A 75 NNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSNWNDFFASLQGVIAAS--SQSEFSNFYLKV 152 (980)
T ss_dssp CTTTSHHHHHHHHHHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHHHH--CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC--CHHHHHHHHHHH
T ss_conf 820108899999999999999705777867999999999999999868544753999999985689--726899999999
Q ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 843121000136555689977899999999740-----359999999966100389997631464899999999999704
Q 002453 153 LTVLPEEVIDSQASDCNISSAHRSQYGQELLSH-----TPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAG 227 (920)
Q Consensus 153 L~~l~eE~~~~~~~~~~l~~~~r~~~~~~l~~~-----~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi~~~ 227 (920)
|..++||+.+.+..+......|++.+++.+... .+.++.+|.++... .+..+...+|+|+.+|+.
T Consensus 153 L~~i~EEv~~~~~~~~~~~~~r~~~lkd~m~~~~~~~i~~~~~~iL~~~~~~--------~~~~l~~~~L~~l~s~i~-- 222 (980)
T 3ibv_A 153 LLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNA--------KNYGTVGLCLQVYAQWVS-- 222 (980)
T ss_dssp HHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHHHH--
T ss_conf 9985899972323667887766599999998662889999999999987412--------889999999999999986--
Q ss_pred CCCCCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHCHHHC-CCCHHHHHHH
Q ss_conf 566567101102014999997417999289999999999723579369--9986413237640011002-7987689059
Q 002453 228 CFTEISQGSLAAHPLLNFVFNSLQVQSSFDVAIEVLVELVGRHEGLPQ--ALLCRVPFLKELLLLPALT-DGDEKVIGGL 304 (920)
Q Consensus 228 ~~~~i~~~~~~~~~ll~~~~~~L~~~~~~~~a~~~l~eii~~~~~~~~--~l~~~l~~l~~~~~~~~~~-~~d~d~~~~l 304 (920)
|+|.+.+.++++++.+|+.|.+++.+++|++|++++++++++... .++.. +++.+.+.. ... ++|.|..+++
T Consensus 223 ---wi~~~~i~~~~ll~~l~~~L~~~~~r~~A~ecL~ei~~k~~~~~~k~~li~~-l~L~~~~~~-l~~~~~D~d~~~~l 297 (980)
T 3ibv_A 223 ---WININLIVNEPCMNLLYSFLQIEELRCAACETMTEIVNKKMKPLEKLNLLNI-LNLNLFFSK-SQEQSTDPNFDEHV 297 (980)
T ss_dssp ---TSCHHHHHCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH-HHHHHHHCC------CCHHHHHHH
T ss_pred ---HCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHH-HHCCCCCHHHHHHH
T ss_conf ---5277865030189999998288677999999999999737895668999999-757999998-74455568999999
Q ss_pred HHHHHHHHHHHHHHHHHCC------------HHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 9999999786369998179------------2389999999820078888730223019999999987601524554443
Q 002453 305 ACLMSEIGQAAPSLIVEAS------------PEALALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASIAKNK 372 (920)
Q Consensus 305 ~~l~~~~~e~~~~~l~~~~------------~~~~~ll~~ll~~~~~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~~~~~ 372 (920)
|++++++|+.++.. .+.+ +....+++++|.|++|| +++|+..+++||+.+.+.+...+ .+
T Consensus 298 a~L~~~~ge~l~~~-~~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~~~--~deVs~~t~~Fw~~~l~~~~~~~-----~~ 369 (980)
T 3ibv_A 298 AKLINAQGVELVAI-KSDPSELSPELKENCSFQLYNLFPYLIRYLSDD--YDETSTAVFPFLSDLLVSLRKES-----SS 369 (980)
T ss_dssp HHHHHHHHHHHHHH-HTSCC--CHHHHHHHHHHHHHTHHHHHHHHTCS--SHHHHHTTHHHHHHHHHHHHHHT-----TS
T ss_pred HHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHCC-----CC
T ss_conf 99999999999987-358655552556668999999999999996798--06399999999999999987244-----22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH----HHCC
Q ss_conf 4333511989999999999740568998899-8888888519999999999999999860845899999854----3159
Q 002453 373 KHVEDMFFSVFSALLDALLLRAQVDESSFND-DGMVDLPDGLVQFRMNLVELLVDICQLLRSATFIQKVFFG----SWGS 447 (920)
Q Consensus 373 ~~~~~~~~~~~~~ll~~l~~k~~~p~~~~~~-~~~~d~~d~f~~~R~~~~d~l~~~~~il~~~~~l~~~~~~----~~~~ 447 (920)
....+.++|++.+|++++++||+||++..++ ++|.||+++|.+||++++ ++.|++.++|++.++..+++. +.+.
T Consensus 370 ~~~~~~~~~~l~~Ll~~li~k~~yp~d~~~~~~~d~ed~~~F~e~Rk~l~-~l~d~~~~l~~~~~l~~~~~~i~~~l~~~ 448 (980)
T 3ibv_A 370 KELSASLKEFLKSLLEAIIKKMKYDESQEWDDDPDSEEEAEFQEMRKKLK-IFQDTINSIDSSLFSSYMYSAITSSLSTA 448 (980)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTCCCCCCSSSSTHHHHHHHHHHHH-HHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 34337899999999999998722898656666655547999999999999-99999996484988888999999999987
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----CCCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --99999803656899999842201355786-----555468999999831-----684365556789999889999994
Q 002453 448 --ANVPIPWKEVETKLFALNVVSEVVLQEGQ-----AFDFSVIMQLVAVLS-----ASRSEELKGFMHIVYRSLADVIGS 515 (920)
Q Consensus 448 --~~~~~~W~~~Ea~L~~l~~iae~i~~~~~-----~~~l~~i~~ll~~l~-----~~~~~~~~~~~~l~~~t~~~~ig~ 515 (920)
...+.+|+++||+||+++++||++..... ...+|.+++++..+. +++++ .+|+++ |+++||
T Consensus 449 l~~~~~~~W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll~~ll~s~i~~~~hp------~V~~~~-~~~l~r 521 (980)
T 3ibv_A 449 ATLSPENSWQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQILALVTTSQVCRHPHP------LVQLLY-MEILVR 521 (980)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHHHHHHHSSTTTCCCH------HHHHHH-HHHHHH
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH------HHHHHH-HHHHHH
T ss_conf 1555899879999999999998765343123667552106899999999984788889978------999999-999999
Q ss_pred HHHHHHHCHHCHHHHHHHHHH--HCCCCC--HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-HHHCCC-------
Q ss_conf 368888563314999999998--106571--57999999999999931016997408999999999-972799-------
Q 002453 516 YSKWISAFQTNARPLLLFLAA--GISEAV--SSNACASALRKICEDASALIDEPSNLEILMWIGEA-LEKRHL------- 583 (920)
Q Consensus 516 y~~wl~~~p~~L~~vl~~l~~--~l~~~~--v~~~Aa~al~~lc~~c~~~l~~~~~~~~l~~~~~~-l~~~~l------- 583 (920)
|++|+..||++++++|+++++ |+++++ ++.+|+++|++||++|+.++. | +.+.+++.+.. +.....
T Consensus 522 ys~~~~~~~~~l~~~L~~ll~~~gl~~~~~~V~~~a~~af~~f~~~~~~~L~-~-~~~~il~~l~~lL~~~~~~~~~~~~ 599 (980)
T 3ibv_A 522 YASFFDYESAAIPALIEYFVGPRGIHNTNERVRPRAWYLFYRFVKSIKKQVV-N-YTESSLAMLGDLLNISVSPVTDMDA 599 (980)
T ss_dssp TGGGGGTCCTTHHHHHHHHTSTTTTTCCCTTTHHHHHHHHHHHHHHTTTTCS-S-SHHHHHHHTTGGGCCCCCCCCC--C
T ss_pred HHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 9999851935499999998260026699765999999999999998668744-5-8999999999861686788875322
Q ss_pred ------------CHHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf ------------9563999999999997169--92578999999988899999994640379997777952467777766
Q 002453 584 ------------PLEDEEEVVGAISLILGSV--SNKELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYTQILSSA 649 (920)
Q Consensus 584 ------------~~~~~~~l~eai~~ii~~l--p~~~~~~~~l~~ll~p~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 649 (920)
..+++..++||+|.+++.. |.++ +..+++.++.|++++++++++.....+ + ... .+...
T Consensus 600 ~~~~~~~~~~~~~~~~ql~L~eaig~li~~~~~~~e~-~~~~l~~ll~pl~~~l~~~l~~~~~~~---~-~~~--~i~~~ 672 (980)
T 3ibv_A 600 PVPTLNSSIRNSDFNSQLYLFETVGVLISSGNLTPEE-QALYCDSLINALIGKANAALSSDLSAL---E-NII--SVYCS 672 (980)
T ss_dssp SSCCHHHHHHTTTHHHHHHHHHHHHHHHHHSCCCHHH-HHHHHHHHHHHHHHHHHHHHTTSCC-----C-HHH--HHHHH
T ss_pred CCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCC---C-HHH--HHHHH
T ss_conf 2210454203677147889999999999278998789-999999999999999999886413586---3-888--99999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77777521001334556788988886089999969999999997321054289999999999999965242576399999
Q 002453 650 TRGLYRMGTVFSHLPVPLPTNPAGDDPIFALLRVFWPMLEKLFRSEHMENGNLSTAACRALSLAIQSSGQHFVTLLPQVL 729 (920)
Q Consensus 650 ~~~l~~l~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~i~~~~~~~~~~i~e~~c~~~~~~~~~l~~~~~p~l~~i~ 729 (920)
+..+.++++.|++.. ...+|+..+++++|+++..++. .|+++..|+|++|++++++++++|.++.|++|+++
T Consensus 673 i~al~~lakgf~~~~-------~~~~p~~~~f~~~~~~il~~l~-~~~~~~~irea~~~~~~r~i~~lg~~~~p~lp~~i 744 (980)
T 3ibv_A 673 LMAIGNFAKGFPARG-------SEEVAWLASFNKASDEIFLILD-RMGFNEDIRGAVRFTSGRIINVVGPDMLPKVPQLI 744 (980)
T ss_dssp HHHHHHHHHTSCSCC--------CCCSHHHHHHHHHHHHHHHHH-HSCCSHHHHHHHHHHHHHHTTTTHHHHTTTHHHHH
T ss_pred HHHHHHHHCCCCCCC-------CCCCCHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 999999731678646-------8888189999999999999988-26786789999999999999975576798789999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCHHHHHHHHHHHH
Q ss_conf 999985532067531887899999980588887421699999975668899851568----7887883699999999999
Q 002453 730 DCLSTNFVSFQNHECYIRTASVVIEEFGHKDEYGPLFVTTFERFSQAASVRALNSSY----ICDQEPDLVEAYTNFASTF 805 (920)
Q Consensus 730 ~~l~~~f~~~~~~~~~L~l~~~li~~f~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~----~~~~~pD~v~~~f~l~~~~ 805 (920)
+.++..|... ++++||++++++|+.||.+ +.+.+.+++..+.+++ +..+.+.. .+++..|+.++||.|+..+
T Consensus 745 ~~ll~~~~~~-e~~~fL~l~~qli~~f~~~--~~~~l~~ll~~l~~~i-f~~l~~~~~~td~~r~~~~l~r~~~~fl~~i 820 (980)
T 3ibv_A 745 SILLNSIDMN-ELVDVLSFISQLIHIYKDN--MMEITNRMLPTLLMRI-FSSLSAAPQGTDDAVKQNDLRKSYISFILQL 820 (980)
T ss_dssp HHHHHHCCTT-THHHHHHHHHHHHHHTTTT--SHHHHHHHHHHHHHHH-HHHTTC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHH-HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998369879-9999999999999999888--9999998899999999-9971689899479999999999999999999
Q ss_pred HHH-HHHHHHHCC-HHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 965-248887201-2404999999987-51368746899999999999964543
Q 002453 806 VRT-SRKEVLAAS-GALLEVSFQKAAI-CCTAMHRGAALAAMSYLSCFLEECLA 856 (920)
Q Consensus 806 l~~-~p~~~~~s~-~~~l~~il~~~l~-~l~~~e~~~~~a~~~Fl~~li~~~~~ 856 (920)
+.+ .+.++++.. .+.++.++...+. +...+|..+.|+++.|+++++..+++
T Consensus 821 ~~~~~~~v~~s~~n~~~l~~~l~~l~~~a~~~~d~~~~K~a~~~l~~~v~~~~~ 874 (980)
T 3ibv_A 821 LNKGFGSILFTEENQVYFDPLINSILHFANLVGEPATQKSSIALVSKMVSLWGG 874 (980)
T ss_dssp HHTTCTGGGGSHHHHTTHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHC---
T ss_pred HHCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 837860452177656789999999999826678748998999999999999779
No 3
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=1.00 E-value=1 Score=718.16 Aligned_cols=835 Identities=14% Similarity=0.155 Sum_probs=644.6
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 51899999999996039994879999999999603869999999964359888875246988999999999603667789
Q 002453 3 MDLQIKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYLQ 82 (920)
Q Consensus 3 ~~~~~~v~~ai~~ly~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~l~ 82 (920)
|+. +.+++|+.++|++++ ..|++|++||++||++|++|..|..+|... .+.++|||||++|+++|+++|..++
T Consensus 13 ~dv-~~Le~av~~ly~p~~-~~r~~A~~~L~~~q~sp~aw~~~~~iL~~s-----~~~~vR~faa~~Lk~~I~~~W~~L~ 85 (1023)
T 4hat_C 13 LDI-ALLDQVVSTFYQGSG-VQQKQAQEILTKFQDNPDAWQKADQILQFS-----TNPQSKFIALSILDKLITRKWKLLP 85 (1023)
T ss_dssp CCH-HHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHCTTGGGGHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred CCH-HHHHHHHHHHHCCCH-HHHHHHHHHHHHHHCCCCHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999-999999999849995-999999999999871954888999995389-----9889999999999999976111299
Q ss_pred HHHHHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 367999999999999970689------86999999999999994602--6786499999994102488851489999984
Q 002453 83 SAAKDALLNALLVAAKRFSSG------PPQLLTQICLALSALILRAV--EHGKPIEKLFYSLQNLQSQDNGNMAVLEMLT 154 (920)
Q Consensus 83 ~~~~~~Lr~~Ll~~l~~~~~~------~~~v~~kL~~aLa~l~~~~~--~W~~~i~~l~~~l~~~~~~~~~~~~~L~~L~ 154 (920)
++++..+|+.+++++.++..+ ++.+++|||.+++.++.+.. .||+++.+++..+++ ++.....+|++|+
T Consensus 86 ~e~~~~Ir~~Ll~~l~~~~~~~~~i~~~~~i~nKLa~~la~I~~~~~p~~Wp~~l~dL~~~l~~---~~~~~~~~L~iL~ 162 (1023)
T 4hat_C 86 NDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSSS---SVNVCENNMIVLK 162 (1023)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTTT---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHCC---CHHHHHHHHHHHH
T ss_conf 9999999999999999865785222231999999999999999985733232899999998569---9778999999999
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 31210001365556899778999999997403599999999661003899976314648999999999997045665671
Q 002453 155 VLPEEVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQ 234 (920)
Q Consensus 155 ~l~eE~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi~~~~~~~i~~ 234 (920)
.|+||+.+... ..++..||..+++.+....+.|++++.+++.... ..++...+|+|+.+|+. |+|.
T Consensus 163 ~L~EEV~~~~~--~~l~~~r~~~lk~~l~~~~~~I~~ll~~iL~~~~-------~~~l~~~~L~~l~s~l~-----WI~i 228 (1023)
T 4hat_C 163 LLSEEVFDFSA--EQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGA-------SSSLIVATLESLLRYLH-----WIPY 228 (1023)
T ss_dssp HHHHHHHTSCT--TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-------SCHHHHHHHHHHHHHTT-----TSCT
T ss_pred HHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHH-----HCCH
T ss_conf 99999987100--0015999888999999989999999999982789-------88999999999999998-----4899
Q ss_pred CHHCCCCHHHHHH-HHCCCCCCHHHHHHHHHHHHHCCC--C---HHHH---HHHHH------------HHHHHHHHCHHH
Q ss_conf 0110201499999-741799928999999999972357--9---3699---98641------------323764001100
Q 002453 235 GSLAAHPLLNFVF-NSLQVQSSFDVAIEVLVELVGRHE--G---LPQA---LLCRV------------PFLKELLLLPAL 293 (920)
Q Consensus 235 ~~~~~~~ll~~~~-~~L~~~~~~~~a~~~l~eii~~~~--~---~~~~---l~~~l------------~~l~~~~~~~~~ 293 (920)
+.+.++++++.+| .+|.+++++++|++|+++++++.. + +.+. ++..+ ..+++.+. ..
T Consensus 229 ~~i~~~~ll~~l~~~~L~~~~~r~~A~ecL~eIv~~~~~~~~~~~~~~l~~lf~~~l~~l~~~i~p~~~~l~~~~~--~~ 306 (1023)
T 4hat_C 229 RYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYA--NA 306 (1023)
T ss_dssp HHHHSSSHHHHHHTHHHHSHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHH--HT
T ss_pred HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH--CC
T ss_conf 8751444999999987698788999999999998042578557788999999999999999973797412899986--26
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH--H-HHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHH
Q ss_conf 2798768905999999997863699981792--3-899999998200788887302230199999999876015245544
Q 002453 294 TDGDEKVIGGLACLMSEIGQAAPSLIVEASP--E-ALALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASIAK 370 (920)
Q Consensus 294 ~~~d~d~~~~l~~l~~~~~e~~~~~l~~~~~--~-~~~ll~~ll~~~~~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~~~ 370 (920)
.++|.+.++++|++|+++|++|...+.+++. . ....++.|+.|+.++ |+++.+++++|||.|++++++.
T Consensus 307 ~~~D~e~~~~l~~l~~~~~e~~~~li~~~~~~~~~l~~~l~~Ll~~~~~~--d~ei~~~tl~FW~~L~~~l~~e------ 378 (1023)
T 4hat_C 307 NGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIE--ERELFKTTLDYWHNLVADLFYE------ 378 (1023)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHGGGGTSCGGGHHHHHHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHTTS------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHC------
T ss_conf 63119999999999999999999998679103589999999999861899--2889999999999999999856------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 434333511989999999999740568998-----89988------8888851999999999999999986084589999
Q 002453 371 NKKHVEDMFFSVFSALLDALLLRAQVDESS-----FNDDG------MVDLPDGLVQFRMNLVELLVDICQLLRSATFIQK 439 (920)
Q Consensus 371 ~~~~~~~~~~~~~~~ll~~l~~k~~~p~~~-----~~~~~------~~d~~d~f~~~R~~~~d~l~~~~~il~~~~~l~~ 439 (920)
+.....|+|+|.+|+.++++||+||++. +.++| +.|+.+.|+.|| |++.+++.+.+.+ ++..
T Consensus 379 --~~~~~~~~~~~~~L~~vli~km~~P~e~~ive~d~~~~~~e~~~d~d~~~~f~~~R----d~L~~l~~l~~~~-~~~~ 451 (1023)
T 4hat_C 379 --PLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSER----EVLVYLTHLNVID-TEEI 451 (1023)
T ss_dssp --TTTGGGGHHHHHHHHHHHHHSCCCCTTCCEEECTTSCEEECSSCCGGGHHHHHHHH----HHHHHHHHHCHHH-HHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH----HHHHHHHCCCHHH-HHHH
T ss_conf --57888899999999999998657982026677888608887144558899999999----9999986068789-9999
Q ss_pred HHHHHHCC-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98543159-99999803656899999842201355786555468999999831684365556789999889999994368
Q 002453 440 VFFGSWGS-ANVPIPWKEVETKLFALNVVSEVVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLADVIGSYSK 518 (920)
Q Consensus 440 ~~~~~~~~-~~~~~~W~~~Ea~L~~l~~iae~i~~~~~~~~l~~i~~ll~~l~~~~~~~~~~~~~l~~~t~~~~ig~y~~ 518 (920)
+++.+... .+++.+|+.+||++|++|+|++++.++.....++.+++.+..++.+..... ..+.++. |+|+++|+|++
T Consensus 452 ~~~~l~~~l~~~~~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~Ll~l~~~~~~~d-~k~~v~~-t~~~~lGry~~ 529 (1023)
T 4hat_C 452 MISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKRGKD-NKAVVAS-DIMYVVGQYPR 529 (1023)
T ss_dssp HHHHHHHHHSSTTCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCCSHH-HHHHHHH-HHHHHHHTCHH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHH-HHHHHHHHHHH
T ss_conf 999999985488788899989999999997689815578889999999997541034676-2599999-99999999999
Q ss_pred HHHHCHHCHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHCCCCC------CCCHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 8885633149999999981065--715799999999999993101699------74089999999999727999563999
Q 002453 519 WISAFQTNARPLLLFLAAGISE--AVSSNACASALRKICEDASALIDE------PSNLEILMWIGEALEKRHLPLEDEEE 590 (920)
Q Consensus 519 wl~~~p~~L~~vl~~l~~~l~~--~~v~~~Aa~al~~lc~~c~~~l~~------~~~~~~l~~~~~~l~~~~l~~~~~~~ 590 (920)
|+..||++|++++++++.++++ |.++.+|+.||++||++|+.++.. .++++.+...+.... ..++...+..
T Consensus 530 wl~~~~~~L~~vl~~L~~~l~~~~~~v~~~A~~al~~l~~~c~~~l~~~~~~e~~p~~~~il~~l~~~~-~~l~~~~~~~ 608 (1023)
T 4hat_C 530 FLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTT-ADLQPQQVHT 608 (1023)
T ss_dssp HHHHCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHHH-TTSCHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHCCHHHHHH
T ss_conf 986167989999999999861698789999999999999998887613577778606999999999998-8479888999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH--HHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99999999716992578999999988899999994640379997777952467--7777667777752100133455678
Q 002453 591 VVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYT--QILSSATRGLYRMGTVFSHLPVPLP 668 (920)
Q Consensus 591 l~eai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~l~~l~~~~~~l~~~~~ 668 (920)
++||+|.+++++|+++.+..+++.++.|..+.++++..++. .+|..+. ...+.....+.+++.+.++++
T Consensus 609 lyeai~~vi~~~~~~~~~~~~l~~L~~~~~~~~~~l~~~~~-----~~~~~~~d~~~~~~l~~il~~~~~v~~~lg---- 679 (1023)
T 4hat_C 609 FYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQST-----ANPTLLLDSETVKIIANIIKTNVAVCTSMG---- 679 (1023)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHTHHHHHHHHHHHHHHH-----HCTTGGGCHHHHHHHHHHHHHHHHHHHHHG----
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCHHHCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_conf 99999999985887744899999998858999999999872-----272541287889999999999999999826----
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--------CHHH-----HHHHHHHHHHHHHHH-----HH------HHHHH
Q ss_conf 898888608999996999999999732105--------4289-----999999999999965-----24------25763
Q 002453 669 TNPAGDDPIFALLRVFWPMLEKLFRSEHME--------NGNL-----STAACRALSLAIQSS-----GQ------HFVTL 724 (920)
Q Consensus 669 ~~~~~~~p~~~~~~~~~~~l~~i~~~~~~~--------~~~i-----~e~~c~~~~~~~~~l-----~~------~~~p~ 724 (920)
++..+.++.+|+.+..+.. .+.+ ++.. ..+.|+++|+.+-.+ +. -...+
T Consensus 680 ------~~f~~~~~~i~~~~l~~y~-~~s~~i~~~~~~~g~~~~~~~~~r~~r~ik~~il~l~~~~i~~~~~~~~~~~~~ 752 (1023)
T 4hat_C 680 ------ADFYPQLGHIYYNMLQLYR-AVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDVVKVL 752 (1023)
T ss_dssp ------GGGHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCGGGGGSHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf ------8899999999999999999-999999999984794253168888889999999999999996279889999986
Q ss_pred HHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 9999999998553206---7531887899999980588887421699999975668899851568788788369999999
Q 002453 725 LPQVLDCLSTNFVSFQ---NHECYIRTASVVIEEFGHKDEYGPLFVTTFERFSQAASVRALNSSYICDQEPDLVEAYTNF 801 (920)
Q Consensus 725 l~~i~~~l~~~f~~~~---~~~~~L~l~~~li~~f~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~pD~v~~~f~l 801 (920)
+|++++.++..|..+. +.+++|++.+++|..+|. .+.+.+..+++.+..+| +..+. .++.++||.+.+||+|
T Consensus 753 ~~~l~~~vl~dY~~~~~~~r~~~vL~l~s~iv~~~~~--~~~~~~~~il~~vf~~T-l~mi~--~~~~~~Pe~r~~ff~l 827 (1023)
T 4hat_C 753 VEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGH--MIPQGVILILQSVFECT-LDMIN--KDFTEYPEHRVEFYKL 827 (1023)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHHGG--GCHHHHHHHHHHHHHHH-HHHHS--SCSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-HHHHH--CCCCCCHHHHHHHHHH
T ss_conf 7889999998887287201038899999999998877--41015689999999999-99985--5622294989999999
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 99999652488872012404999999987513687468999999999999645431158899999830789999999820
Q 002453 802 ASTFVRTSRKEVLAASGALLEVSFQKAAICCTAMHRGAALAAMSYLSCFLEECLASLLGYTTSIPEGSFNAMAIQVISHS 881 (920)
Q Consensus 802 ~~~~l~~~p~~~~~s~~~~l~~il~~~l~~l~~~e~~~~~a~~~Fl~~li~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 881 (920)
+.+++++||..++..+++.+..+++|++.+++.+||++..++++|+.+++...... .+ .+..+++.+++
T Consensus 828 l~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~~h~~r~~~~~~l~~~~~ll~~~~~~----~~-------~~~~~~f~~~~ 896 (1023)
T 4hat_C 828 LKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERM----GN-------VPFANEFHKNY 896 (1023)
T ss_dssp HHHHHHHCTHHHHTSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH----CS-------SHHHHHHHHHH
T ss_pred HHHHHHHCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC----CC-------HHHHHHHHHHH
T ss_conf 99999977699974999999999999999808995589999999999999987745----78-------48999999999
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 17999999999536784111333699999999
Q 002453 882 GEGLVSNVVYALLGVSAMSRVNTSFNLKYAIF 913 (920)
Q Consensus 882 G~~Lv~~ll~~~~g~~prs~l~~~~eil~~l~ 913 (920)
+..++..++..+....-.+....-+.+|+.++
T Consensus 897 ~~~~~~~~~~v~td~~h~~~f~~~~~~l~~l~ 928 (1023)
T 4hat_C 897 FFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928 (1023)
T ss_dssp HHHHHHHHHHHHHSSSCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999838516531899999999999
No 4
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=1.00 E-value=1 Score=714.21 Aligned_cols=839 Identities=20% Similarity=0.332 Sum_probs=673.0
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 89999999999603999487999999999960386999999996435988887524698899999999960366778936
Q 002453 5 LQIKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYLQSA 84 (920)
Q Consensus 5 ~~~~v~~ai~~ly~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~l~~~ 84 (920)
..+++.++++++|.++|++.|++|++||++||++|++|.+|..+|... .+.++|||||++|+++|+++|..++++
T Consensus 22 ~~~~l~~~l~~l~~~~~~~~r~~A~~~L~~~~~~p~~~~~~~~lL~~~-----~~~~vr~~aa~~L~~~i~~~w~~l~~~ 96 (963)
T 2x19_B 22 TVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPD-----KVPEIQYFGASALHIKISRYWSDIPTD 96 (963)
T ss_dssp CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSTTHHHHHHHHTSTT-----SCHHHHHHHHHHHHHHHHHCGGGSCGG
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHCHHHCCHH
T ss_conf 599999999998359798999999999999846999999999986579-----725889999999999997388749999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHHH
Q ss_conf 799999999999997068986999999999999994602--678649999999410248---885148999998431210
Q 002453 85 AKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAV--EHGKPIEKLFYSLQNLQS---QDNGNMAVLEMLTVLPEE 159 (920)
Q Consensus 85 ~~~~Lr~~Ll~~l~~~~~~~~~v~~kL~~aLa~l~~~~~--~W~~~i~~l~~~l~~~~~---~~~~~~~~L~~L~~l~eE 159 (920)
++..+|+.|++++.....+|+.|++|+|.+++.++.+.. .||+++.+++..+++..+ ++......+++|+.++||
T Consensus 97 ~~~~ir~~ll~~l~~~~~~~~~ir~kl~~~la~i~~~~~p~~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~l~iL~~l~ee 176 (963)
T 2x19_B 97 QYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEE 176 (963)
T ss_dssp GHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCC------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHH
T ss_conf 99999999999999874898899999999999999874831155599999999864335787478899999999868998
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC
Q ss_conf 00136555689977899999999740359999999966100389997631464899999999999704566567101102
Q 002453 160 VIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAA 239 (920)
Q Consensus 160 ~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi~~~~~~~i~~~~~~~ 239 (920)
+.+.+ .+.++|..+++.+....+.|+.++.+++.... .+..+...+++|+.+|++.+ .+. ..+
T Consensus 177 ~~~~~-----~~~~~r~~~~~~l~~~~~~i~~ll~~~l~~~~------~~~~~~~~~l~~l~~wi~~~----~~~--~~~ 239 (963)
T 2x19_B 177 FQTSR-----LPQYRKGLVRTSLAVECGAVFPLLEQLLQQPS------SPSCVRQKVLKCFSSWVQLE----VPL--QDC 239 (963)
T ss_dssp HTTCC-----C---------CCSGGGHHHHHHHHHHHHSCTT------CCHHHHHHHHHHHHHHHTSS----CCG--GGT
T ss_pred HHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHHHHHHHCCC----CCC--CCC
T ss_conf 85065-----86999999999999878899999999982778------80579999999999998289----985--341
Q ss_pred CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 014999997417999289999999999723579-----369998641323764001100279876890599999999786
Q 002453 240 HPLLNFVFNSLQVQSSFDVAIEVLVELVGRHEG-----LPQALLCRVPFLKELLLLPALTDGDEKVIGGLACLMSEIGQA 314 (920)
Q Consensus 240 ~~ll~~~~~~L~~~~~~~~a~~~l~eii~~~~~-----~~~~l~~~l~~l~~~~~~~~~~~~d~d~~~~l~~l~~~~~e~ 314 (920)
+++++.+|+++.+++.++.|++|+.+++.+++. ....+++.++.+.+.+. .+..++|.+..+++|++|+++++.
T Consensus 240 ~~ll~~l~~~l~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~~~~~~~ 318 (963)
T 2x19_B 240 EALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLR-QAVQNGDMETSHGICRIAVALGEN 318 (963)
T ss_dssp HHHHHHHHHHTTSTTTHHHHHHHHHHHHTCTTGGGCHHHHHHHHHHHHTTHHHHH-HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 6899999998679647999999999997531124577999999999974079999-999877989999999999999998
Q ss_pred HHHHHHHC---CHHHHHHHHHHHHHCCCCC---CCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 36999817---9238999999982007888---87302230199999999876015245544434333511989999999
Q 002453 315 APSLIVEA---SPEALALADALLSCVAFPS---EDWEIADSTLQFWSTLASYILGLDASIAKNKKHVEDMFFSVFSALLD 388 (920)
Q Consensus 315 ~~~~l~~~---~~~~~~ll~~ll~~~~~p~---~d~~v~~~~~~FW~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ll~ 388 (920)
+...+.++ ++.+..++++++.++.+|| .|++++..+++||+.+.+.+..+++. .++.....++|++.+++.
T Consensus 319 ~~~~l~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~v~~~~l~fw~~l~~~~~~~~~~---~~~~~~~~~~~~l~~l~~ 395 (963)
T 2x19_B 319 HSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAE---KQAVYQQVYRPVYFQLVD 395 (963)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHTCSSCTTTTCGGGGGGHHHHHHHHHHHTTSCHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_conf 69999737556589999999999997588888720345441299999999999862344---457889999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH---HHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9997405689988998888888519999999999999999860845899999854---3159999998036568999998
Q 002453 389 ALLLRAQVDESSFNDDGMVDLPDGLVQFRMNLVELLVDICQLLRSATFIQKVFFG---SWGSANVPIPWKEVETKLFALN 465 (920)
Q Consensus 389 ~l~~k~~~p~~~~~~~~~~d~~d~f~~~R~~~~d~l~~~~~il~~~~~l~~~~~~---~~~~~~~~~~W~~~Ea~L~~l~ 465 (920)
+++.|+.||+++..++|+.|++++|.+||+.++|++.+++.+.+.+ ++..+++. .......+.+|+.+||++|+++
T Consensus 396 ~ll~~~~~p~~~~~~~~~~de~~~~~~~r~~~~~~L~~~~~~~~~~-~l~~~~~~l~~~l~~~~~~~~w~~~eaal~al~ 474 (963)
T 2x19_B 396 VLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAE-LLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQ 474 (963)
T ss_dssp HHHHHHSCCCHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTHH-HHHHHHHHHHHHHHTCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 9999980998302267776389999999999999999999970689-999999999999972579986679989999999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHCCCCCHHH
Q ss_conf 42201355786555468999999831684365556789999889999994368888563314999999998106571579
Q 002453 466 VVSEVVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLADVIGSYSKWISAFQTNARPLLLFLAAGISEAVSSN 545 (920)
Q Consensus 466 ~iae~i~~~~~~~~l~~i~~ll~~l~~~~~~~~~~~~~l~~~t~~~~ig~y~~wl~~~p~~L~~vl~~l~~~l~~~~v~~ 545 (920)
++++.+..+.+. .++.+++.+..++. ++ +.+|.++ ++++|+|++|+..||+++++++++++.++++|.|+.
T Consensus 475 ~i~~~~~~~~~~-~l~~l~~~l~~l~~-~~------~~vr~~~-~~~l~~~~~~l~~~~~~l~~vl~~l~~~l~~~~V~~ 545 (963)
T 2x19_B 475 SIAETIDVNYSD-VVPGLIGLIPRISI-SN------VQLADTV-MFTIGALSEWLADHPVMINSVLPLVLHALGNPELSV 545 (963)
T ss_dssp HHTTSCCSSCCS-HHHHHHHHGGGSCC-CS------HHHHHHH-HHHHHHTHHHHHHCHHHHTTTHHHHHHHTTCGGGHH
T ss_pred HHHHHCCCHHHH-HHHHHHHHHHHCCC-CC------HHHHHHH-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 997043822467-89999999985799-85------8999999-999998888887588989999999998717846899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999310169974089999999-9997279995639999999999971699257899999998889999999
Q 002453 546 ACASALRKICEDASALIDEPSNLEILMWIG-EALEKRHLPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIG 624 (920)
Q Consensus 546 ~Aa~al~~lc~~c~~~l~~~~~~~~l~~~~-~~l~~~~l~~~~~~~l~eai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~ 624 (920)
+|+.||.++|++|+..+. | +++.+++.. ..+.+..++.+.+..+++++|.+++++|. +....++..++.|+.+.++
T Consensus 546 ~A~~al~~l~~~~~~~l~-p-~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~i~~~~~~-~~~~~~~~~l~~~l~~~l~ 622 (963)
T 2x19_B 546 SSVSTLKKICRECKYDLP-P-YAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQV-EEILKNLHSLISPYIQQLE 622 (963)
T ss_dssp HHHHHHHHHHHHTGGGCT-T-THHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTSCH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999899877-6-699999999998635789848899999999999962999-9999999999989999999
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC------------CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4640379997777952467777766777775210013345567889------------8888608999996999999999
Q 002453 625 KLIDGDNNHSLIHNPATYTQILSSATRGLYRMGTVFSHLPVPLPTN------------PAGDDPIFALLRVFWPMLEKLF 692 (920)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~~~~~~l~~~~~~~------------~~~~~p~~~~~~~~~~~l~~i~ 692 (920)
++.++.. ++... ......+++++.+++.+....... +...+|+..+.+++||++..++
T Consensus 623 ~~~~~~~------~~~~~----~~~~~~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 692 (963)
T 2x19_B 623 KLAEEIP------NPSNK----LAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNPVVVVLQQVFQLIQKVL 692 (963)
T ss_dssp HHHSSCS------CHHHH----HHHHHHHHHHHHHHHHCCSSCCC---------------CCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCC------CHHHH----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9982789------87789----9999999999999977489864332223221247777889946999999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 73210542899999999999999652425763999999999855320675318878999999805888874216999999
Q 002453 693 RSEHMENGNLSTAACRALSLAIQSSGQHFVTLLPQVLDCLSTNFVSFQNHECYIRTASVVIEEFGHKDEYGPLFVTTFER 772 (920)
Q Consensus 693 ~~~~~~~~~i~e~~c~~~~~~~~~l~~~~~p~l~~i~~~l~~~f~~~~~~~~~L~l~~~li~~f~~~~~~~~~~~~l~~~ 772 (920)
. .|..+.++.|.+|+++++++.++|..+.|++|++++.+...|... +.++++++++.++..||.++.+.+.+..++..
T Consensus 693 ~-~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~l~~~~~~l~~~~~~~-~~~~~l~l~~~li~~f~~~~~~~~~~~~~l~~ 770 (963)
T 2x19_B 693 S-KWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTI-PQASALDLTRQLVHIFAHEPAHFPPIEALFLL 770 (963)
T ss_dssp H-HHTTCHHHHHHHHHHHHHHHHHSSSTTGGGHHHHHHHHHHHHHHS-CCHHHHHHHHHHHHHHTTCTTTCHHHHHHHHH
T ss_pred H-HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 8-566746899999999999997501034240799999999998757-85089999999999857780137899999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 756688998515687887883699999999999965248887201240-4999999987513687468999999999999
Q 002453 773 FSQAASVRALNSSYICDQEPDLVEAYTNFASTFVRTSRKEVLAASGAL-LEVSFQKAAICCTAMHRGAALAAMSYLSCFL 851 (920)
Q Consensus 773 l~~~~~~~~l~~~~~~~~~pD~v~~~f~l~~~~l~~~p~~~~~s~~~~-l~~il~~~l~~l~~~e~~~~~a~~~Fl~~li 851 (920)
+..++ +..+.. .+.++||++++||.|+.++++++|..++++ +. +..++++++.+++.+|+++.+++++||.+++
T Consensus 771 ~~~~~-l~~~~~--~~~~~pd~~~~~f~ll~~~~~~~~~~~~~~--~~~~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~ 845 (963)
T 2x19_B 771 VTSVT-LTLFQQ--GPRDHPDIVDSFMQLLAQALKRKPDLFLCE--RLDVKAVFQCAVLALKFPEAPTVKASCGFFTELL 845 (963)
T ss_dssp HHHHH-HHHHHH--CTTTCHHHHHHHHHHHHHHHHHCGGGGGCT--TSCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHG
T ss_pred HHHHH-HHHHHH--CCCCCCHHHHHHHHHHHHHHHHCCHHHCCC--CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999-999862--765586389999999999997583987298--5147999999999757897799999999999998
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 64543115889999983078999999982017999999999536784111333699999999
Q 002453 852 EECLASLLGYTTSIPEGSFNAMAIQVISHSGEGLVSNVVYALLGVSAMSRVNTSFNLKYAIF 913 (920)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~Lv~~ll~~~~g~~prs~l~~~~eil~~l~ 913 (920)
+.... .+.+++++.++|+.|+..++.+++|+.||+.++.++++|+.++
T Consensus 846 ~~~~~--------------~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~il~~l~ 893 (963)
T 2x19_B 846 PRCGE--------------VESVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALN 893 (963)
T ss_dssp GGTTS--------------SCHHHHHTTTSHHHHHHHHHHHHTTTSCGGGHHHHHHHHHHHH
T ss_pred HCCCC--------------HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 51897--------------3789999999799999999998533598467788999999999
No 5
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=1.00 E-value=1 Score=691.68 Aligned_cols=842 Identities=13% Similarity=0.172 Sum_probs=644.6
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 99999999996039994879999999999603869999999964359888875246988999999999603667789367
Q 002453 6 QIKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYLQSAA 85 (920)
Q Consensus 6 ~~~v~~ai~~ly~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~l~~~~ 85 (920)
.+.+++++.++|+ ++++.|++|++||++||++|+||+.|..+|... .+.++|||||++|+++|+++|..+|+++
T Consensus 27 v~~Le~lv~~ly~-p~~~~r~qA~~~L~q~q~sp~aw~~~~~iL~~s-----~~~~vR~fAa~~L~~~I~~~W~~L~~e~ 100 (1073)
T 3gjx_A 27 INLLDNVVNCLYH-GEGAQQRMAQEVLTHLKEHPDAWTRVDTILEFS-----QNMNTKYYGLQILENVIKTRWKILPRNQ 100 (1073)
T ss_dssp HHHHHHHHHTTTC-SSHHHHHHHHHHHHTSSCCSCHHHHHTCC---C-----CSHHHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 9999999999829-999999999999999872905899999994689-----9899999999999999976466299999
Q ss_pred HHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999999970689------86999999999999994602--6786499999994102488851489999984312
Q 002453 86 KDALLNALLVAAKRFSSG------PPQLLTQICLALSALILRAV--EHGKPIEKLFYSLQNLQSQDNGNMAVLEMLTVLP 157 (920)
Q Consensus 86 ~~~Lr~~Ll~~l~~~~~~------~~~v~~kL~~aLa~l~~~~~--~W~~~i~~l~~~l~~~~~~~~~~~~~L~~L~~l~ 157 (920)
+..||+.|++++.+...+ ++.+++|||.+++.++.+.. .||+++.+++..+++ ++.....+|++|+.|+
T Consensus 101 ~~~LR~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~~Wp~fi~dLv~~~~~---~~~~~~~~L~IL~~L~ 177 (1073)
T 3gjx_A 101 CEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRT---SESLCQNNMVILKLLS 177 (1073)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHHH---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHCC---CHHHHHHHHHHHHHHH
T ss_conf 9999999999999872685323334689999999999999986833160899999998379---9889999999999999
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 10001365556899778999999997403599999999661003899976314648999999999997045665671011
Q 002453 158 EEVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSL 237 (920)
Q Consensus 158 eE~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi~~~~~~~i~~~~~ 237 (920)
||+.+.++.+ ++..||.++++.+....+.+++++..++... .+.++...+|+|+.+|+. |++.+.+
T Consensus 178 EEV~d~~~~~--l~~~r~~~lk~~L~~~~~~Il~ll~~iL~~~-------~~~~lv~~~L~~L~~~~s-----WI~i~~i 243 (1073)
T 3gjx_A 178 EEVFDFSSGQ--ITQVKAKHLKDSMCNEFSQIFQLCQFVMENS-------QNAPLVHATLETLLRFLN-----WIPLGYI 243 (1073)
T ss_dssp HHHTTSHHHH--BCHHHHHHHHHHHHHTCHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTT-----TSCTHHH
T ss_pred HHHHHCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------CCHHHHHHHHHHHHHHHH-----HCCHHHH
T ss_conf 9998514342--3088999999999999999999999875556-------887999999999999998-----6589876
Q ss_pred CCCCHHHHH-HHHCCCCCCHHHHHHHHHHHHHCCC-CHH---HHHHHHHHH-----------HHHHHHCHHHCCCCHHHH
Q ss_conf 020149999-9741799928999999999972357-936---999864132-----------376400110027987689
Q 002453 238 AAHPLLNFV-FNSLQVQSSFDVAIEVLVELVGRHE-GLP---QALLCRVPF-----------LKELLLLPALTDGDEKVI 301 (920)
Q Consensus 238 ~~~~ll~~~-~~~L~~~~~~~~a~~~l~eii~~~~-~~~---~~l~~~l~~-----------l~~~~~~~~~~~~d~d~~ 301 (920)
.++++++.+ |..|.+++++++|++|+++++++.. ++. ..++..++. +.+.+. ...++|.+.+
T Consensus 244 ~~~~ll~~L~~~~L~~~~~r~aA~dcL~eIv~k~~~~~~~~~~~lf~~~~~~i~~ilp~~~~l~~~y~--~~~~~d~e~~ 321 (1073)
T 3gjx_A 244 FETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFETLFTLTMMQLKQMLPLNTNIRLAYS--NGKDDEQNFI 321 (1073)
T ss_dssp HSSSHHHHHHHHTSSSHHHHHHHHHHHHHHHHSCSGGGHHHHHHHHHHHHHHHHHHSCTTSCHHHHHH--TCCTTHHHHH
T ss_pred CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH--CCCHHHHHHH
T ss_conf 05428999999866986789999999999996415206899999999999999886588202788874--4655149999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHH----------
Q ss_conf 05999999997863699981792---38999999982007888873022301999999998760152455----------
Q 002453 302 GGLACLMSEIGQAAPSLIVEASP---EALALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASI---------- 368 (920)
Q Consensus 302 ~~l~~l~~~~~e~~~~~l~~~~~---~~~~ll~~ll~~~~~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~---------- 368 (920)
+++|++|+++|++|...+.++++ .....+++++.|++++ |+++.++||+||+.|.++++...+..
T Consensus 322 ~~l~~~f~~~~e~~~~lIe~~p~~~~~l~~~l~~ll~~s~~~--d~ei~kitf~fW~~L~~~L~~e~~~~~~~~~~~~~~ 399 (1073)
T 3gjx_A 322 QNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEVE--ETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGS 399 (1073)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHHHHHCCSCCCCSSCTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999999999998358542479999999999983899--199999999999999999986142333445100222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----HHHHHHH---HCCCHHHHHH
Q ss_conf -444343335119899999999997405689988998888888519999999999-----9999998---6084589999
Q 002453 369 -AKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGLVQFRMNLVE-----LLVDICQ---LLRSATFIQK 439 (920)
Q Consensus 369 -~~~~~~~~~~~~~~~~~ll~~l~~k~~~p~~~~~~~~~~d~~d~f~~~R~~~~d-----~l~~~~~---il~~~~~l~~ 439 (920)
.++.+.....|+|+|.+|..+++.||.+|++.... +.|+.|-|++||++.++ .+++++. -++.+.++..
T Consensus 400 ~~~~~~~~~~~y~~i~~~L~~vlI~~m~~P~ev~i~--e~e~ge~~re~~~d~~~~~ly~~mrd~L~~lt~l~~~~~~~i 477 (1073)
T 3gjx_A 400 QHFDIPPRRQLYLTVLSKVRLLMVSRMAKPEEVLVV--ENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEII 477 (1073)
T ss_dssp CCSCSCHHHHTTHHHHHHHHHHHHHTCCCSCCEEEE--ECSSSCEEEEECSSCHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 100103389999999999999999825999423546--765126899988613218999999999998704888999999
Q ss_pred HHHHHHCC-CCCCCCCHHHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98543159-999998036568999998422013557-8655546899999983168436555678999988999999436
Q 002453 440 VFFGSWGS-ANVPIPWKEVETKLFALNVVSEVVLQE-GQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLADVIGSYS 517 (920)
Q Consensus 440 ~~~~~~~~-~~~~~~W~~~Ea~L~~l~~iae~i~~~-~~~~~l~~i~~ll~~l~~~~~~~~~~~~~l~~~t~~~~ig~y~ 517 (920)
+++.+... .+...+|+.+||++|++|+|++.+.++ ++. .++.+++.+..+|.+++... ..+++++++|+++|+|+
T Consensus 478 ~~~~l~~~~~~~~~sW~~lea~~~aigaIag~~~~~~E~~-~Lp~vi~~Ll~L~e~~~~kd--~k~~vas~i~~vlgrY~ 554 (1073)
T 3gjx_A 478 MTKKLQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKR-FLVTVIKDLLGLCEQKRGKD--NKAIIASNIMYIVGQYP 554 (1073)
T ss_dssp HHHHHHHHHTSCCCCHHHHHHHHHHHHHTTTSSCHHHHHH-HHHHHHHHHHHHHHHSCSHH--HHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHHCCCCCCCCCC--HHHHHHHHHHHHHHHHH
T ss_conf 9999999846788887888399999999877278621002-29999999863414444341--26999999999995007
Q ss_pred HHHHHCHHCHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 88885633149999999981065--7157999999999999931016997------408999999999972799956399
Q 002453 518 KWISAFQTNARPLLLFLAAGISE--AVSSNACASALRKICEDASALIDEP------SNLEILMWIGEALEKRHLPLEDEE 589 (920)
Q Consensus 518 ~wl~~~p~~L~~vl~~l~~~l~~--~~v~~~Aa~al~~lc~~c~~~l~~~------~~~~~l~~~~~~l~~~~l~~~~~~ 589 (920)
+|+..||++|.+++++++.++++ +.++.+|+.||.+||++|+.+++.. ++++.+...+... ...++.+...
T Consensus 555 ~wl~~h~~~L~~vl~~L~~~m~~~~~~vq~aA~~af~~i~~~C~~~lv~~~~~e~~p~i~~il~~~~~~-~~~l~~~~~~ 633 (1073)
T 3gjx_A 555 RFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTI-ICDLQPQQVH 633 (1073)
T ss_dssp HHHHHCHHHHHHHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHTGGGGTSCCTTCSSCHHHHHHTSHHHH-HTTCCHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH-HHHCCHHHHH
T ss_conf 999867799999999999998449878999999999999999989875235554535999999999999-9746999999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99999999971699257899999998889999999464037999-77779524677777667777752100133455678
Q 002453 590 EVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNH-SLIHNPATYTQILSSATRGLYRMGTVFSHLPVPLP 668 (920)
Q Consensus 590 ~l~eai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~l~~l~~~~~~l~~~~~ 668 (920)
.+++|+|.+++++|.+.....+++.++.|..++|+++.+++..+ +.-.++. .+.++..+++.... ..
T Consensus 634 ~lyeav~~vi~~~p~~~~~~~~i~~Lm~~~~~~w~~l~~~~~~~~~~~~d~~-----------~i~~l~~il~~n~~-v~ 701 (1073)
T 3gjx_A 634 TFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPE-----------TVKQLGSILKTNVR-AC 701 (1073)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHCGGGGGCHH-----------HHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHH-----------HHHHHHHHHHHHHH-HH
T ss_conf 9999999999859972029999999988999999999998621714205838-----------99999999965399-88
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--------CH-----HHHHHHHHHHHHHHHHH-----HHH------HHHH
Q ss_conf 898888608999996999999999732105--------42-----89999999999999965-----242------5763
Q 002453 669 TNPAGDDPIFALLRVFWPMLEKLFRSEHME--------NG-----NLSTAACRALSLAIQSS-----GQH------FVTL 724 (920)
Q Consensus 669 ~~~~~~~p~~~~~~~~~~~l~~i~~~~~~~--------~~-----~i~e~~c~~~~~~~~~l-----~~~------~~p~ 724 (920)
....++..+.+..+|+-+..+.. .+.+ ++ ....+.||++|+.+..+ +.. ...+
T Consensus 702 --~~~g~~f~~~~~~i~~~~l~~y~-~~s~~i~~~v~~~g~~~~~~~~~~~~r~ik~eil~l~~~~i~~~~~~~~v~~~~ 778 (1073)
T 3gjx_A 702 --KAVGHPFVIQLGRIYLDMLNVYK-CLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENF 778 (1073)
T ss_dssp --HHHCGGGHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCGGGGSSHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHT
T ss_pred --HHCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf --45652579999999999999999-999999999982784112259999989999999999999981479789999986
Q ss_pred HHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 999999999855320---67531887899999980588887421699999975668899851568788788369999999
Q 002453 725 LPQVLDCLSTNFVSF---QNHECYIRTASVVIEEFGHKDEYGPLFVTTFERFSQAASVRALNSSYICDQEPDLVEAYTNF 801 (920)
Q Consensus 725 l~~i~~~l~~~f~~~---~~~~~~L~l~~~li~~f~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~pD~v~~~f~l 801 (920)
+|++++.++..|... .+++++|++.+++|..+|. .+.+.+..+++.+..+| +..+.. ++.++||...+||+|
T Consensus 779 i~pl~~~vl~dY~~~~p~~r~~evL~l~s~iv~k~~~--~~~~~~~~il~~vf~~T-l~mi~~--~f~~~Pe~r~~ff~l 853 (1073)
T 3gjx_A 779 VPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGG--HITAEIPQIFDAVFECT-LNMINK--DFEEYPEHRTNFFLL 853 (1073)
T ss_dssp SHHHHHHTHHHHHHSCGGGCCTHHHHHHHHHHHHHGG--GTGGGHHHHHHHHHHHH-HHHHSS--CSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHH-HHHHHC--CCCCCCHHHHHHHHH
T ss_conf 7899999999885388531369999999999999886--54044899999999999-999867--731296889999999
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 99999652488872012404999999987513687468999999999999645431158899999830789999999820
Q 002453 802 ASTFVRTSRKEVLAASGALLEVSFQKAAICCTAMHRGAALAAMSYLSCFLEECLASLLGYTTSIPEGSFNAMAIQVISHS 881 (920)
Q Consensus 802 ~~~~l~~~p~~~~~s~~~~l~~il~~~l~~l~~~e~~~~~a~~~Fl~~li~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 881 (920)
+.++..+|+..++..+++.+..++++++.+++..+|++..++++++.+++...... .+..+++.+++
T Consensus 854 l~~~~~~~f~~l~~l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll~~~~~~-------------~~~~~~F~~~~ 920 (1073)
T 3gjx_A 854 LQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQE-------------EAAAQSFYQTY 920 (1073)
T ss_dssp HHHHHHHCGGGTTTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHTTC-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-------------HHHHHHHHHHH
T ss_conf 99999977699983999999999999999918997169999999999999976248-------------49999999999
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 17999999999536784111333699999999
Q 002453 882 GEGLVSNVVYALLGVSAMSRVNTSFNLKYAIF 913 (920)
Q Consensus 882 G~~Lv~~ll~~~~g~~prs~l~~~~eil~~l~ 913 (920)
+..++..++..+....-.|....-+.+|+.++
T Consensus 921 ~~~~~~~i~~v~td~~h~~~f~~q~~il~~l~ 952 (1073)
T 3gjx_A 921 FCDILQHIFSVVTDTSHTAGLTMHASILAYMF 952 (1073)
T ss_dssp HHHHHHHHHHHHTCTTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999718267631047999999999
No 6
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=1.00 E-value=1 Score=615.70 Aligned_cols=836 Identities=14% Similarity=0.153 Sum_probs=614.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 85189999999999603999487999999999960386999999996435988887524698899999999960366778
Q 002453 2 QMDLQIKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYL 81 (920)
Q Consensus 2 ~~~~~~~v~~ai~~ly~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~l 81 (920)
+|+ .+++.+++..+|+ |+++.|++|++||++||++|++|..|..+|... .+.++|||||++|+++|+++|..+
T Consensus 12 ~~~-~~~l~~~l~~~~~-p~~~~r~~Ae~~L~~~~~~p~~~~~l~~iL~~s-----~~~~vr~~aa~~Lk~~i~~~W~~l 84 (1049)
T 3m1i_C 12 DLD-IALLDQVVSTFYQ-GSGVQQKQAQEILTKFQDNPDAWQKADQILQFS-----TNPQSKFIALSILDKLITRKWKLL 84 (1049)
T ss_dssp CCC-HHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHSTTGGGGHHHHHHHC-----SCHHHHHHHHHHHHHHHHHTGGGS
T ss_pred CCC-HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 465-9999999999868-993899999999999883956999999998629-----988999999999999997607049
Q ss_pred CHHHHHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHH-C-CCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 9367999999999999970689------8699999999999999460-2-678649999999410248885148999998
Q 002453 82 QSAAKDALLNALLVAAKRFSSG------PPQLLTQICLALSALILRA-V-EHGKPIEKLFYSLQNLQSQDNGNMAVLEML 153 (920)
Q Consensus 82 ~~~~~~~Lr~~Ll~~l~~~~~~------~~~v~~kL~~aLa~l~~~~-~-~W~~~i~~l~~~l~~~~~~~~~~~~~L~~L 153 (920)
+++++..+|+.+++++.....+ ++.|++|+|.+++.++.+. + .||++++++++.+++ ++......+.+|
T Consensus 85 ~~~~~~~ir~~ll~~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~~Wp~ll~~L~~~~~~---~~~~~~~~l~~L 161 (1049)
T 3m1i_C 85 PNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSSS---SVNVCENNMIVL 161 (1049)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHTT---CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC---CHHHHHHHHHHH
T ss_conf 99999999999999998627762000002899999999999999976811154799999998715---858899999999
Q ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 43121000136555689977899999999740359999999966100389997631464899999999999704566567
Q 002453 154 TVLPEEVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEIS 233 (920)
Q Consensus 154 ~~l~eE~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi~~~~~~~i~ 233 (920)
+.++||+.+.+. ..++..+|..++..+....+.++.++.+++... ++..++..+++|+.+|+. |++
T Consensus 162 ~~l~eev~~~~~--~~~~~~r~~~lk~~l~~~~~~i~~~~~~~l~~~-------~~~~~~~~aL~~l~~~l~-----wi~ 227 (1049)
T 3m1i_C 162 KLLSEEVFDFSA--EQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQG-------SSSSLIVATLESLLRYLH-----WIP 227 (1049)
T ss_dssp HHHHHHHHTSCT--TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTT-----TSC
T ss_pred HHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHH-----HCC
T ss_conf 999999987260--013268999999999999999999999999866-------888999999999999986-----088
Q ss_pred CCHHCCCCHHHHHH-HHCCCCCCHHHHHHHHHHHHHCCCC-----HHH---HHHHHHHH------------HHHHHHCHH
Q ss_conf 10110201499999-7417999289999999999723579-----369---99864132------------376400110
Q 002453 234 QGSLAAHPLLNFVF-NSLQVQSSFDVAIEVLVELVGRHEG-----LPQ---ALLCRVPF------------LKELLLLPA 292 (920)
Q Consensus 234 ~~~~~~~~ll~~~~-~~L~~~~~~~~a~~~l~eii~~~~~-----~~~---~l~~~l~~------------l~~~~~~~~ 292 (920)
.+.+..+++++.++ ..+.+++.++.|++|+.+++++..+ +.. .+++.++. +...+. .
T Consensus 228 ~~~~~~~~ll~~l~~~~l~~~~~~~~a~~~L~~i~~~~~~~~~~~~~~~~~~l~~~~l~~l~~si~p~~~~l~~~~~--~ 305 (1049)
T 3m1i_C 228 YRYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYA--N 305 (1049)
T ss_dssp THHHHSSSHHHHHHTHHHHSHHHHHHHHHHHHHHHHCCCCTTCHHHHHHHHHHHHHHHHHHHHHTCCTTSCHHHHHH--H
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC--C
T ss_conf 99886055999999986898767999999999999488995034688999999999999998862798541787744--5
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHH
Q ss_conf 0279876890599999999786369998179---2389999999820078888730223019999999987601524554
Q 002453 293 LTDGDEKVIGGLACLMSEIGQAAPSLIVEAS---PEALALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASIA 369 (920)
Q Consensus 293 ~~~~d~d~~~~l~~l~~~~~e~~~~~l~~~~---~~~~~ll~~ll~~~~~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~~ 369 (920)
..++|.+...++|++|+++++.+...+...+ +....++++++.++.++ |.+++..+++||+.+.++++. .
T Consensus 306 ~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ll~~~~~~--d~~v~~~~lefw~~l~~~l~~-~---- 378 (1049)
T 3m1i_C 306 ANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIE--ERELFKTTLDYWHNLVADLFY-E---- 378 (1049)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHTSS--CHHHHHHHHHHHHHHHHHHHH-S----
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHH-C----
T ss_conf 771028999999999999999999998288214799999999999988689--089999999999999999974-6----
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CCC----CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 443433351198999999999974056899889---988----8888851999999999999999986084589999985
Q 002453 370 KNKKHVEDMFFSVFSALLDALLLRAQVDESSFN---DDG----MVDLPDGLVQFRMNLVELLVDICQLLRSATFIQKVFF 442 (920)
Q Consensus 370 ~~~~~~~~~~~~~~~~ll~~l~~k~~~p~~~~~---~~~----~~d~~d~f~~~R~~~~d~l~~~~~il~~~~~l~~~~~ 442 (920)
+.....+++++.+++.+++.||+||++..+ +++ +.++++|-..+|+.++|++..++.+.+. .++..++.
T Consensus 379 ---~~~~~~~~~~l~~Lv~~ll~~m~~~ed~~~~~dd~~e~~r~~~~d~d~~~~~~~~~~~L~~l~~~~~~-~~l~~v~~ 454 (1049)
T 3m1i_C 379 ---PLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVI-DTEEIMIS 454 (1049)
T ss_dssp ---TTCGGGGHHHHHHHHHHHHHTCCCCTTCCEEECTTSCEEECSSCCHHHHHHHHHHHHHHHHHHHHCHH-HHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHH
T ss_conf ---35899999999999999998658996200005799850486531222799999999999998836989-99999999
Q ss_pred HHHCC-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43159-99999803656899999842201355786555468999999831684365556789999889999994368888
Q 002453 443 GSWGS-ANVPIPWKEVETKLFALNVVSEVVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLADVIGSYSKWIS 521 (920)
Q Consensus 443 ~~~~~-~~~~~~W~~~Ea~L~~l~~iae~i~~~~~~~~l~~i~~ll~~l~~~~~~~~~~~~~l~~~t~~~~ig~y~~wl~ 521 (920)
.+... .+.+.+|+.+||++|+++++++.+........++.+++.+..++.+..... ..+ ++..++|+++|+|++|+.
T Consensus 455 ~l~~~l~~~~~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~l~~~~~~~~-~~~-~v~~~~~~~lgry~~~~~ 532 (1049)
T 3m1i_C 455 KLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKD-NKA-VVASDIMYVVGQYPRFLK 532 (1049)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHTTSSCSHH-HHH-HHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CHH-HHHHHHHHHHHHHHHHHH
T ss_conf 999872778789899999999999986023762557999999999998776543566-549-999889999997799998
Q ss_pred HCHHCHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHCCCCC------CCCHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 56331499999999810657--15799999999999993101699------74089999999999727999563999999
Q 002453 522 AFQTNARPLLLFLAAGISEA--VSSNACASALRKICEDASALIDE------PSNLEILMWIGEALEKRHLPLEDEEEVVG 593 (920)
Q Consensus 522 ~~p~~L~~vl~~l~~~l~~~--~v~~~Aa~al~~lc~~c~~~l~~------~~~~~~l~~~~~~l~~~~l~~~~~~~l~e 593 (920)
.||++++++++.++.+++++ .|+.+|++||.+||++|+..+.. .++++.+++.+..+.. .++.++...++|
T Consensus 533 ~~~~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~~~~l~~~~~~~~~p~~~~il~~l~~~~~-~~~~~~~~~~~e 611 (1049)
T 3m1i_C 533 AHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTA-DLQPQQVHTFYK 611 (1049)
T ss_dssp HCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHHHT-TSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH-HCCHHHHHHHHH
T ss_conf 6789999999999998618987899999999999999988986115677877579999998999998-589999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC----
Q ss_conf 9999971699257899999998889999999464037999-77779524677777667777752100133455678----
Q 002453 594 AISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNH-SLIHNPATYTQILSSATRGLYRMGTVFSHLPVPLP---- 668 (920)
Q Consensus 594 ai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~l~~l~~~~~~l~~~~~---- 668 (920)
|+|.++++.|+.+....++..++.|+++++.+++.+...+ +...++... . .....+.+++.+.+.+.....
T Consensus 612 ai~~ii~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~---~l~~~l~~~~~~~~~l~~~f~p~~~ 687 (1049)
T 3m1i_C 612 ACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETV-K---IIANIIKTNVAVCTSMGADFYPQLG 687 (1049)
T ss_dssp HHHHHHHTCCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCGGGGGSHHHH-H---HHHHHHHHHHHHHHHHGGGGHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999975997899999999999889999999999873164640487999-9---9999999999999985678899999
Q ss_pred -----------------------C-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----------------------8-9888860899999699999999973210542899999999999999652425763
Q 002453 669 -----------------------T-NPAGDDPIFALLRVFWPMLEKLFRSEHMENGNLSTAACRALSLAIQSSGQHFVTL 724 (920)
Q Consensus 669 -----------------------~-~~~~~~p~~~~~~~~~~~l~~i~~~~~~~~~~i~e~~c~~~~~~~~~l~~~~~p~ 724 (920)
. .....+|....++.+||.+..++. .|..+.++ ++..+.|+
T Consensus 688 ~i~~~~l~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~l~~ll~-~~~~~~~~--------------l~~~~~~~ 752 (1049)
T 3m1i_C 688 HIYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVE-TYISKARN--------------LDDVVKVL 752 (1049)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCGGGGGSHHHHHHHHHHHHHHHHHH-HHHHHCSC--------------HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCC--------------HHHHHHHH
T ss_conf 9999999999999998999997058502210889999999999999999-99984797--------------79999987
Q ss_pred HHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 99999999985532067531-----8878999999805888874216999999756688998515687887883699999
Q 002453 725 LPQVLDCLSTNFVSFQNHEC-----YIRTASVVIEEFGHKDEYGPLFVTTFERFSQAASVRALNSSYICDQEPDLVEAYT 799 (920)
Q Consensus 725 l~~i~~~l~~~f~~~~~~~~-----~L~l~~~li~~f~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~pD~v~~~f 799 (920)
+|++++.+...|.. ++++ ++++++.++..+|+ .+.+.+..++..+.+++ +..+. .+++++||+.++||
T Consensus 753 ~~~~l~~ll~~~~~--~~~~~~~~~~l~l~~~ii~~~~~--~~~~~l~~i~~~l~~~~-~~~i~--~~~~~~pd~~~~~f 825 (1049)
T 3m1i_C 753 VEPLLNAVLEDYMN--NVPDARDAEVLNCMTTVVEKVGH--MIPQGVILILQSVFECT-LDMIN--KDFTEYPEHRVEFY 825 (1049)
T ss_dssp HHHHHHHHHHHHHH--SCGGGCCTHHHHHHHHHHHHHGG--GCHHHHHHHHHHHHHHH-HHHHS--SCSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH-HHHHH--CCHHHCHHHHHHHH
T ss_conf 89999999998871--89632368799999999999887--60666899999999999-99985--24210899999999
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999996524888720124049999999875136874689999999999996454311588999998307899999998
Q 002453 800 NFASTFVRTSRKEVLAASGALLEVSFQKAAICCTAMHRGAALAAMSYLSCFLEECLASLLGYTTSIPEGSFNAMAIQVIS 879 (920)
Q Consensus 800 ~l~~~~l~~~p~~~~~s~~~~l~~il~~~l~~l~~~e~~~~~a~~~Fl~~li~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 879 (920)
.|+.+++++||..+++.++..+..++++++.+++.+|+++.+++++||.++++..+.. .+ .+..+++..
T Consensus 826 ~ll~~i~~~~~~~l~~~~~~~~~~v~~~~~~al~~~~~~~~~~~l~~l~~l~~~~~~~----~~-------~~~~~~f~~ 894 (1049)
T 3m1i_C 826 KLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERM----GN-------VPFANEFHK 894 (1049)
T ss_dssp HHHHHHHHHCTHHHHHSCHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHS----CS-------CHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC----CC-------HHHHHHHHH
T ss_conf 9999999867899975999999999999999947998169999999999999998762----88-------688999999
Q ss_pred HCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 20179999999995367841113336999999995
Q 002453 880 HSGEGLVSNVVYALLGVSAMSRVNTSFNLKYAIFF 914 (920)
Q Consensus 880 ~~G~~Lv~~ll~~~~g~~prs~l~~~~eil~~l~~ 914 (920)
++|..++..++..+.|...||.+++++++|+.++.
T Consensus 895 ~~~~~l~~~~~~~l~~~~h~s~~~~~~~~l~~l~~ 929 (1049)
T 3m1i_C 895 NYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLIS 929 (1049)
T ss_dssp HHHHHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998564275218999999999999
No 7
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=1.00 E-value=1 Score=510.55 Aligned_cols=776 Identities=15% Similarity=0.127 Sum_probs=524.5
Q ss_pred HHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 99999999996039-99487999999999960386999999996435988887524698899999999960366778936
Q 002453 6 QIKVAQAVHVLNHD-TESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYLQSA 84 (920)
Q Consensus 6 ~~~v~~ai~~ly~~-~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~l~~~ 84 (920)
.+++++++..+|++ +|++.|++|+++|++||++|++|..+...|... +.+.++||||+++|+++|+++|..++++
T Consensus 10 ~~~l~~~l~~~~~p~~~~~~r~~Ae~~L~~~~~~p~~~~~~~~~L~~~----s~~~~vR~~A~~~Lk~~I~~~W~~l~~e 85 (1204)
T 3a6p_A 10 CEQLVKAVTVMMDPNSTQRYRLEALKFCEEFKEKCPICVPCGLRLAEK----TQVAIVRHFGLQILEHVVKFRWNGMSRL 85 (1204)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTST----TSCHHHHHHHHHHHHHHHHHSGGGSCHH
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC----CCCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 999999999985899986999999999999883952799999999713----8998999999999999998715669999
Q ss_pred HHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 799999999999997068----986999999999999994602--67864999999941024888514899999843121
Q 002453 85 AKDALLNALLVAAKRFSS----GPPQLLTQICLALSALILRAV--EHGKPIEKLFYSLQNLQSQDNGNMAVLEMLTVLPE 158 (920)
Q Consensus 85 ~~~~Lr~~Ll~~l~~~~~----~~~~v~~kL~~aLa~l~~~~~--~W~~~i~~l~~~l~~~~~~~~~~~~~L~~L~~l~e 158 (920)
++..||+.+++++..... .++.|++|++.+++.++.+.. .||+++.++++.+++ ++......|.+|..++|
T Consensus 86 ~k~~Ir~~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~d~p~~Wp~ll~~L~~~~~~---~~~~~e~~L~iL~~L~E 162 (1204)
T 3a6p_A 86 EKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQ---GETQTELVMFILLRLAE 162 (1204)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHHHHHT---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHH
T ss_conf 999999999999873034555565799999999999999986813125899999998648---98899999999999999
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCC--CCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 00013655568997789999999974035999999996610038---------999--7631464899999999999704
Q 002453 159 EVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFD---------GGV--PVQLHDRNRKILRCLLSWVRAG 227 (920)
Q Consensus 159 E~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~---------~~~--~~~~~~~~~~~l~c~~sWi~~~ 227 (920)
|+.+.+. +...+|+.+++.+..+.+.|+..+.+++....+ .+. ..+...+...+|+|+.+|+.
T Consensus 163 ev~~~~~----~~~~r~~~l~~~l~~~~~~I~~~~~~iL~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aL~~l~~~l~-- 236 (1204)
T 3a6p_A 163 DVVTFQT----LPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYID-- 236 (1204)
T ss_dssp HHHTSCC----SCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHHHHHTTTT--
T ss_pred HHCCCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 8706220----6899999999999999999999999999998787730452000011224459999999999999984--
Q ss_pred CCCCCCCCHHCCC--CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHH--HHHHHHHH--HHHHHHCHH-------HC
Q ss_conf 5665671011020--14999997417999289999999999723579369--99864132--376400110-------02
Q 002453 228 CFTEISQGSLAAH--PLLNFVFNSLQVQSSFDVAIEVLVELVGRHEGLPQ--ALLCRVPF--LKELLLLPA-------LT 294 (920)
Q Consensus 228 ~~~~i~~~~~~~~--~ll~~~~~~L~~~~~~~~a~~~l~eii~~~~~~~~--~l~~~l~~--l~~~~~~~~-------~~ 294 (920)
|++.+.+... .+++.++..+.+++++..|++|++++++++++... .++..+.. +...+. .+ +.
T Consensus 237 ---Wi~~~~i~~~~~~ll~~l~~~l~~~~lr~~A~ecL~~i~s~~~~~~~~~~li~~l~~~~l~~l~~-~~~~~~~~~~~ 312 (1204)
T 3a6p_A 237 ---WVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILS-AAQTADGGGLV 312 (1204)
T ss_dssp ---TSCHHHHHTTTSHHHHHHHHGGGCTTTHHHHHHHHHHHHTCCSCHHHHGGGGGGGSHHHHHHHHH-HHHTCCCCSCC
T ss_pred ---CCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCC
T ss_conf ---26889998555529999999759888899999999999948898256789999971689999999-86337878876
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHH
Q ss_conf 798768905999999997863699981-----792389999999820078888730223019999999987601524554
Q 002453 295 DGDEKVIGGLACLMSEIGQAAPSLIVE-----ASPEALALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASIA 369 (920)
Q Consensus 295 ~~d~d~~~~l~~l~~~~~e~~~~~l~~-----~~~~~~~ll~~ll~~~~~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~~ 369 (920)
++|.+..+++|++++++|+.+...+.+ .++.+..++++++.++.|| +.+++..+++||+.+.+... .
T Consensus 313 e~d~e~~k~l~~ll~~lg~~l~~l~~~~~~~~~~~~l~~~l~~lL~~t~~~--~~~vs~~~l~fW~~ll~~~~-~----- 384 (1204)
T 3a6p_A 313 EKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHP--SQFLRSSTQMTWGALFRHEI-L----- 384 (1204)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCTTHHHHHHHHHHHHTSS--CHHHHHHHHHHHHHHHSCTT-T-----
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHCCC-C-----
T ss_conf 078999999999999999999999812323467167999999999998182--07868999999999970644-4-----
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCC-------C--CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH---
Q ss_conf 443433351198999999999---974056899889-------9--8888888519999999999999999860845---
Q 002453 370 KNKKHVEDMFFSVFSALLDAL---LLRAQVDESSFN-------D--DGMVDLPDGLVQFRMNLVELLVDICQLLRSA--- 434 (920)
Q Consensus 370 ~~~~~~~~~~~~~~~~ll~~l---~~k~~~p~~~~~-------~--~~~~d~~d~f~~~R~~~~d~l~~~~~il~~~--- 434 (920)
...+.+.+++.+|++++ +.|++||+++.. + +++.|.+++|.+||++++|++++++.+.+..
T Consensus 385 ----~~~~~~~~~l~~Ll~vl~~~l~k~~yp~~~~~~~~~~~~~D~d~~~E~~~~f~~~Rk~~~d~l~~i~~v~p~~~l~ 460 (1204)
T 3a6p_A 385 ----SRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQ 460 (1204)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHSCCCCSSCCSSTHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf ----6547899989999999999989715864468841134322558708999999999999999999998528899999
Q ss_pred HHHHHHHHHHHC---C-----------------CCCCCCCHHHHHHHHHHHHHHHCCCC-C-CCCCC---HHHHHHHHHH
Q ss_conf 899999854315---9-----------------99999803656899999842201355-7-86555---4689999998
Q 002453 435 TFIQKVFFGSWG---S-----------------ANVPIPWKEVETKLFALNVVSEVVLQ-E-GQAFD---FSVIMQLVAV 489 (920)
Q Consensus 435 ~~l~~~~~~~~~---~-----------------~~~~~~W~~~Ea~L~~l~~iae~i~~-~-~~~~~---l~~i~~ll~~ 489 (920)
.++..+.+.+.. + ...+..|...||..+.++++.+++.. . .+... .+.+++.+..
T Consensus 461 ~v~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ea~~~~leav~~~~~~~~e~~~l~~~~~~~Ll~~ll~ 540 (1204)
T 3a6p_A 461 MAGEWLKYQLSTFLDAGSVNSCSAVGTGEGSLCSVFSPSFVQWEAMTLFLESVITQMFRTLNREEIPVNDGIELLQMVLN 540 (1204)
T ss_dssp HHHHHHHHHHTCC-----------------CCSCSSSHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999975340044566532212355654576888999999999999999999840124453338999999999983
Q ss_pred H-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCHHHHHHHHHHHCCC--------------CCHHHHHHHHHHHH
Q ss_conf 3-16843655567899998899999943688885633149999999981065--------------71579999999999
Q 002453 490 L-SASRSEELKGFMHIVYRSLADVIGSYSKWISAFQTNARPLLLFLAAGISE--------------AVSSNACASALRKI 554 (920)
Q Consensus 490 l-~~~~~~~~~~~~~l~~~t~~~~ig~y~~wl~~~p~~L~~vl~~l~~~l~~--------------~~v~~~Aa~al~~l 554 (920)
+ +.+|. ++++. +.++|+|+.|+..||++++++|++++.++.+ .+++.+|+.+|+++
T Consensus 541 ~~~~~p~--------l~~~~-i~~l~~l~~~~~~~p~~L~~vL~~ll~~l~~~~~~~~~~~~~~~~k~vr~~a~~al~~L 611 (1204)
T 3a6p_A 541 FDTKDPL--------ILSCV-LTNVSALFPFVTYRPEFLPQVFSKLFSSVTFETVEESKAPRTRAVRNVRRHACSSIIKM 611 (1204)
T ss_dssp CCCSCHH--------HHHHH-HHHHHHHGGGGGTCGGGHHHHHHHHHHHHHCCTTCSTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHH--------HHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7887757--------99999-99999878788629257999999999861568843124663189999999999999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHH-HHHCC-CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH-----HH
Q ss_conf 99931016997408999999999-97279-9956399999999999716992578999999988899999994-----64
Q 002453 555 CEDASALIDEPSNLEILMWIGEA-LEKRH-LPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGK-----LI 627 (920)
Q Consensus 555 c~~c~~~l~~~~~~~~l~~~~~~-l~~~~-l~~~~~~~l~eai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~~-----~~ 627 (920)
|++|+..+. ++++.+.+.+.. +..+. ++..++..+++|++.+...+++++....+++.++.|+++++.. .+
T Consensus 612 ~~~~~~~L~--p~~~~i~~~~~~~l~~~~~l~~~e~~~L~eal~~ia~~~~~~~~~~~~l~~ll~P~~~~w~~~~~~~~~ 689 (1204)
T 3a6p_A 612 CRDYPQLVL--PNFDMLYNHVKQLLSNELLLTQMEKCALMEALVLISNQFKNYERQKVFLEELMAPVASIWLSQDMHRVL 689 (1204)
T ss_dssp HHHCHHHHG--GGHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 997468787--899999999999984765146888999999999996367979999999999999999987469898760
Q ss_pred CCCC---------CC---CCCCCCHHH-----HHHHHHHHHHHHHHH---------CC-CCCCCCCCCCCCCCCCHHHHH
Q ss_conf 0379---------99---777795246-----777776677777521---------00-133455678898888608999
Q 002453 628 DGDN---------NH---SLIHNPATY-----TQILSSATRGLYRMG---------TV-FSHLPVPLPTNPAGDDPIFAL 680 (920)
Q Consensus 628 ~~~~---------~~---~~~~~~~~~-----~~~l~~~~~~l~~l~---------~~-~~~l~~~~~~~~~~~~p~~~~ 680 (920)
.... .. ....++... ...+......+.++. +. |-....+ ...+...+|+.+.
T Consensus 690 s~~~~f~~~~G~~~~~~~~~~~d~~~~~r~~l~~~~~~l~~~l~r~~~~~~~~~~~~~gf~~~~~~-~~~p~~~~p~~~~ 768 (1204)
T 3a6p_A 690 SDVDAFIAYVGTDQKSCDPGLEDPCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAGGFVVGYTS-SGNPIFRNPCTEQ 768 (1204)
T ss_dssp HCHHHHHHHHTSSCC--CTTCCTHHHHHHHHHHHHHHHHHHHHHHCCCCSSHHHHHHTTCEEEECS-SCCEEECCTTHHH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEECCCC-CCCCCCCCCHHHH
T ss_conf 599999999677987656664461120489999999999999999628887666513786111478-9870013835889
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHH-------------HHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99699999999973210--5428999999-------------9999999965-24257-639999999998553206753
Q 002453 681 LRVFWPMLEKLFRSEHM--ENGNLSTAAC-------------RALSLAIQSS-GQHFV-TLLPQVLDCLSTNFVSFQNHE 743 (920)
Q Consensus 681 ~~~~~~~l~~i~~~~~~--~~~~i~e~~c-------------~~~~~~~~~l-~~~~~-p~l~~i~~~l~~~f~~~~~~~ 743 (920)
++.+||.+.+++.. +. .++++.+++| +++..|+..- ..... +..+...+.+-..+... +.+
T Consensus 769 i~~ilP~ll~Ll~~-~~~l~~p~~~~~l~~~~~~~~~~~~~er~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-re~ 846 (1204)
T 3a6p_A 769 ILKLLDNLLALIRT-HNTLYAPEMLAKMAEPFTKALDMLDAEKSAILGLPQPLLELNDSPVFKTVLERMQRFFSTL-YEN 846 (1204)
T ss_dssp HHHHHHHHHHHHHH-HHHTTSHHHHTTSCGGGTTTTSCCHHHHHHHTCCCCCCCCTTCCCSCCCHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHH-HHHHCCCHHHHHCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHH
T ss_conf 99983789999999-9874590756545888899973469999986379766565323577767489999999889-999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CHHHHH
Q ss_conf 1887899999980588887421699999975668899851568788788369999999999996524888720-124049
Q 002453 744 CYIRTASVVIEEFGHKDEYGPLFVTTFERFSQAASVRALNSSYICDQEPDLVEAYTNFASTFVRTSRKEVLAA-SGALLE 822 (920)
Q Consensus 744 ~~L~l~~~li~~f~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~pD~v~~~f~l~~~~l~~~p~~~~~s-~~~~l~ 822 (920)
||+++.+.. ..+|..-.-.+.+...+ .+.. |..+... ....-+++++.+| ..++++||..+..+ -.+++.
T Consensus 847 ~y~~lg~~~-~~l~~~fy~~~~l~~~l---~~~~-f~~l~~~-~~~~l~~li~~~~---~p~i~~CP~~~~~~~l~plL~ 917 (1204)
T 3a6p_A 847 CFHILGKAG-PSMQQDFYTVEDLATQL---LSSA-FVNLNNI-PDYRLRPMLRVFV---KPLVLFCPPEHYEALVSPILG 917 (1204)
T ss_dssp HHHHHHHHH-HHHCTTTTTSTTHHHHH---HHHT-TSSTTTS-CHHHHHHHHHHTH---HHHHHTCCGGGTTTTHHHHHH
T ss_pred HHHHHHHHH-HCCCCCCCCCCCHHHHH---HHHH-HHCCHHC-CHHHHHHHHHHHH---HHHHHCCCHHHHHHHHHHHHH
T ss_conf 999999775-11661002884157899---9999-7250103-1789999999999---998860989999988987889
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999987513
Q 002453 823 VSFQKAAICCT 833 (920)
Q Consensus 823 ~il~~~l~~l~ 833 (920)
.+|......|+
T Consensus 918 ~lf~~~~~~L~ 928 (1204)
T 3a6p_A 918 PLFTYLHMRLS 928 (1204)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 8
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=1.00 E-value=1 Score=312.85 Aligned_cols=720 Identities=12% Similarity=0.079 Sum_probs=437.4
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC---
Q ss_conf 51899999999996039994879999999999603869999999964359888875246988999999999603667---
Q 002453 3 MDLQIKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGY--- 79 (920)
Q Consensus 3 ~~~~~~v~~ai~~ly~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~--- 79 (920)
|+..+++.+++.... ++|++.| |+++|++++++|+.|..+.+++.... .+.++|+|||++||++|+++|.
T Consensus 1 M~d~~~l~~~L~~~~-spd~~~r--Ae~~L~~~~~~p~~~~~L~~il~~~~----~~~~vR~~A~i~lkn~i~~~w~~~~ 73 (960)
T 1wa5_C 1 MSDLETVAKFLAESV-IASTAKT--SERNLRQLETQDGFGLTLLHVIASTN----LPLSTRLAGALFFKNFIKRKWVDEN 73 (960)
T ss_dssp CCHHHHHHHHHHHTT-SGGGHHH--HHHHHHHHHTSTTHHHHHHHHHHCTT----SCHHHHHHHHHHHHHHHHHHSBCSS
T ss_pred CCCHHHHHHHHHHHC-CCCHHHH--HHHHHHHHHCCCCHHHHHHHHHHCCC----CCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 975999999999765-9987899--99999985559988999999986579----8888999999999999985488765
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-C-CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf ---7893679999999999999706898699999999999999460-2-6786499999994102488851489999984
Q 002453 80 ---YLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRA-V-EHGKPIEKLFYSLQNLQSQDNGNMAVLEMLT 154 (920)
Q Consensus 80 ---~l~~~~~~~Lr~~Ll~~l~~~~~~~~~v~~kL~~aLa~l~~~~-~-~W~~~i~~l~~~l~~~~~~~~~~~~~L~~L~ 154 (920)
.++++.+..+|+.+++.+.. .++.|++|+|.+++.++.+. + .||++++++++.++++ ++......|.++.
T Consensus 74 ~~~~l~~~~k~~ik~~ll~~l~~---~~~~ir~~l~~~ia~ia~~d~p~~Wp~ll~~L~~~l~s~--~~~~~~~aL~~l~ 148 (960)
T 1wa5_C 74 GNHLLPANNVELIKKEIVPLMIS---LPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSND--DMVTNKGVLTVAH 148 (960)
T ss_dssp SCBSSCHHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHTTCCSS--CTTHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC--CHHHHHHHHHHHH
T ss_conf 67889989999999999999980---879999999999999998617130157999999984789--8899999999999
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 312100013655568997789999999974035999999996610038999763----1464899999999999704566
Q 002453 155 VLPEEVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQ----LHDRNRKILRCLLSWVRAGCFT 230 (920)
Q Consensus 155 ~l~eE~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~----~~~~~~~~l~c~~sWi~~~~~~ 230 (920)
.+.++.. .. . ..++.+..+...+....+.+++++....+...+...+.. .......+++|+.+-+.+
T Consensus 149 ~i~~~~~---~~-~-~~~~~~~~l~~~l~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~---- 219 (960)
T 1wa5_C 149 SIFKRWR---PL-F-RSDELFLEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQ---- 219 (960)
T ss_dssp HHHGGGT---TS-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHHHHHHHSS----
T ss_pred HHHHHHH---HH-H-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_conf 9999988---76-1-4847789999999998999999999999998735798799999999999999999998625----
Q ss_pred CCCCCHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCC-CC----HHHHHHHH
Q ss_conf 56710110201499999741799928999999999972357936999864132376400110027-98----76890599
Q 002453 231 EISQGSLAAHPLLNFVFNSLQVQSSFDVAIEVLVELVGRHEGLPQALLCRVPFLKELLLLPALTD-GD----EKVIGGLA 305 (920)
Q Consensus 231 ~i~~~~~~~~~ll~~~~~~L~~~~~~~~a~~~l~eii~~~~~~~~~l~~~l~~l~~~~~~~~~~~-~d----~d~~~~l~ 305 (920)
.+|... . +.+..++..+..++.... +... ...+ ++ ....+.++
T Consensus 220 ~~~~~~--~--------------~~~~~~~~~~~~~l~~~~--------------p~~~--~d~d~~~~~~~~~vk~~~~ 267 (960)
T 1wa5_C 220 DIPEFF--E--------------DNIQVGMGIFHKYLSYSN--------------PLLE--DPDETEHASVLIKVKSSIQ 267 (960)
T ss_dssp CCCHHH--H--------------HTHHHHHHHHHHHHSCCS--------------CCCC--------CCCHHHHHHHHHH
T ss_pred CCHHHH--H--------------HHHHHHHHHHHHHHCCCC--------------CCCC--CCCCCCCCCHHHHHHHHHH
T ss_conf 655999--9--------------989999999999976899--------------8555--7855331327999999999
Q ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC---CCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--
Q ss_conf 999999786369998179238999999982007---888873022301999999998760152455444343335119--
Q 002453 306 CLMSEIGQAAPSLIVEASPEALALADALLSCVA---FPSEDWEIADSTLQFWSTLASYILGLDASIAKNKKHVEDMFF-- 380 (920)
Q Consensus 306 ~l~~~~~e~~~~~l~~~~~~~~~ll~~ll~~~~---~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~~~~~~~~~~~~~-- 380 (920)
+.++.+.+.+...+.... ..+++.++.... ....++++...+++||..+.+. + ..+..++
T Consensus 268 ~~l~~l~~~~~~~f~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~al~fl~~~~~~----~--------~~~~~~~~~ 332 (960)
T 1wa5_C 268 ELVQLYTTRYEDVFGPMI---NEFIQITWNLLTSISNQPKYDILVSKSLSFLTAVTRI----P--------KYFEIFNNE 332 (960)
T ss_dssp HHHHHHHHHCHHHHHHHH---HHHHHHHHHHHHHCCSCTTSHHHHHHHHHHHHHHHTS----H--------HHHGGGCSH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC----H--------HHHHHHCCC
T ss_conf 999999999899999999---9999999999984377767289999999999999686----7--------689987685
Q ss_pred HHHHHHH-HHHHHHCCCCCCCCCCCCCCC---------CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH----HHC
Q ss_conf 8999999-999974056899889988888---------88519999999999999999860845899999854----315
Q 002453 381 SVFSALL-DALLLRAQVDESSFNDDGMVD---------LPDGLVQFRMNLVELLVDICQLLRSATFIQKVFFG----SWG 446 (920)
Q Consensus 381 ~~~~~ll-~~l~~k~~~p~~~~~~~~~~d---------~~d~f~~~R~~~~d~l~~~~~il~~~~~l~~~~~~----~~~ 446 (920)
+++.+++ .+++..++|++++. +.|+.| +.+++...|+..++++..++...+ +.++..++.. +..
T Consensus 333 ~~l~~li~~~i~~~m~~~~~d~-e~w~~dp~e~i~~d~e~~d~~s~R~aa~~~L~~l~~~~~-~~v~~~~l~~i~~~l~~ 410 (960)
T 1wa5_C 333 SAMNNITEQIILPNVTLREEDV-ELFEDDPIEYIRRDLEGSDTDTRRRACTDFLKELKEKNE-VLVTNIFLAHMKGFVDQ 410 (960)
T ss_dssp HHHHHHHHHTHHHHHSCCGGGT-TTTTTCHHHHHHHHHHC----CHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHH-HHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH
T ss_conf 1899999999687348888789-988449999998635755123718899999999999701-32789999999999987
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHCCC--CCCCC-----CCHHH-HHH-HHHHHCCC-C-HHHHHHHHHHHHHHHHHHHH
Q ss_conf -99999980365689999984220135--57865-----55468-999-99983168-4-36555678999988999999
Q 002453 447 -SANVPIPWKEVETKLFALNVVSEVVL--QEGQA-----FDFSV-IMQ-LVAVLSAS-R-SEELKGFMHIVYRSLADVIG 514 (920)
Q Consensus 447 -~~~~~~~W~~~Ea~L~~l~~iae~i~--~~~~~-----~~l~~-i~~-ll~~l~~~-~-~~~~~~~~~l~~~t~~~~ig 514 (920)
..+.+.+|+..||++++++++++... ..... ..+.. +.+ ++..+.+. + + +.+|+++ |+++|
T Consensus 411 ~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~------p~vr~~a-~~~lg 483 (960)
T 1wa5_C 411 YMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPH------IILRVDA-IKYIY 483 (960)
T ss_dssp HHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSSCSC------HHHHHHH-HHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC------CEEHHHH-HHHHH
T ss_conf 3669612179999999999999987412567741234435699999997378744998888------3303989-99999
Q ss_pred HHHHHHHHCHHCHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHHH-----------HHCCCCCCCCHHHHHHH-HHHHHH
Q ss_conf 4368888563314999999998106571--579999999999999-----------31016997408999999-999972
Q 002453 515 SYSKWISAFQTNARPLLLFLAAGISEAV--SSNACASALRKICED-----------ASALIDEPSNLEILMWI-GEALEK 580 (920)
Q Consensus 515 ~y~~wl~~~p~~L~~vl~~l~~~l~~~~--v~~~Aa~al~~lc~~-----------c~~~l~~~~~~~~l~~~-~~~l~~ 580 (920)
+|++|+ +|+++.++++.+++++.+++ |+.+|+.||.+||+. ++..+. | +++.+++. ...+..
T Consensus 484 ~~~~~~--~~~~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~~~~~~~~~~~~~~l~-p-~l~~ll~~L~~ll~~ 559 (960)
T 1wa5_C 484 TFRNQL--TKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDIS-N-STEILLKNLIALILK 559 (960)
T ss_dssp HTGGGS--CHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTT-T-THHHHHHHHHHHHHT
T ss_pred HHHHHC--CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH-H-HHHHHHHHHHHHHHH
T ss_conf 988658--999999999999998489972199999999999984436444665443598756-4-699999999999971
Q ss_pred CC---CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 79---995639999999999971699257899999998889999999464037999777795246777776677777521
Q 002453 581 RH---LPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYTQILSSATRGLYRMG 657 (920)
Q Consensus 581 ~~---l~~~~~~~l~eai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~ 657 (920)
.. .+..+...++++++.++...+. + ...+...++..++..+....+.. .++... ...+++++
T Consensus 560 ~~~~~~~~~~~e~l~~al~~vv~~~~~-~-~~p~~~~l~~~L~~~l~~~~~~~------~~~~~~-------~~~~e~l~ 624 (960)
T 1wa5_C 560 HGSSPEKLAENEFLMRSIFRVLQTSED-S-IQPLFPQLLAQFIEIVTIMAKNP------SNPRFT-------HYTFESIG 624 (960)
T ss_dssp TCCCHHHHTSCHHHHHHHHHHHHHHTT-T-TGGGHHHHHHHHHHHHHHHTTSC------CCHHHH-------HHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHCC------CCCHHH-------HHHHHHHH
T ss_conf 467877643227999999999998888-6-12479999999999999997398------972788-------99999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Q ss_conf 0013345567889888860899999699999999973210542899999999999999652425763999999999--85
Q 002453 658 TVFSHLPVPLPTNPAGDDPIFALLRVFWPMLEKLFRSEHMENGNLSTAACRALSLAIQSSGQHFVTLLPQVLDCLS--TN 735 (920)
Q Consensus 658 ~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~i~~~~~~~~~~i~e~~c~~~~~~~~~l~~~~~p~l~~i~~~l~--~~ 735 (920)
.+.+... +++...+.+.+||++..++.. .. .+..+.+..++...+... ..+.+.+..+++.+. ..
T Consensus 625 ~l~~~~~---------~~~~~~~~~~~~p~~~~iL~~-~~--~~~~~~~~~i~~~l~~~~-~~~~~~~~~~~~~l~~~~~ 691 (960)
T 1wa5_C 625 AILNYTQ---------RQNLPLLVDSMMPTFLTVFSE-DI--QEFIPYVFQIIAFVVEQS-ATIPESIKPLAQPLLAPNV 691 (960)
T ss_dssp HHHHTSC---------GGGHHHHHHHHHHHHHHHHHT-TC--TTTHHHHHHHHHHHHHHC-SSCCTTTGGGHHHHTSGGG
T ss_pred HHHHCCC---------CCHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHCCHHH
T ss_conf 9996389---------536999999999999999986-05--766999999999999735-4788999999999809998
Q ss_pred HHHHCCCCHHHHHHHHHHHHC---CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 532067531887899999980---58888742169999997566889985156878878836999999999999652488
Q 002453 736 FVSFQNHECYIRTASVVIEEF---GHKDEYGPLFVTTFERFSQAASVRALNSSYICDQEPDLVEAYTNFASTFVRTSRKE 812 (920)
Q Consensus 736 f~~~~~~~~~L~l~~~li~~f---~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~pD~v~~~f~l~~~~l~~~p~~ 812 (920)
+... .++..+.-++..| +.+ .+.. +..++..+ ..+.+. ..+| ...|.++..++..+|..
T Consensus 692 ~~~~----~~~~~~~~~L~~~~~~~~~-~~~~-~~~~l~~~------~~~~~~----~~~~--~~a~~ll~~i~~~~~~~ 753 (960)
T 1wa5_C 692 WELK----GNIPAVTRLLKSFIKTDSS-IFPD-LVPVLGIF------QRLIAS----KAYE--VHGFDLLEHIMLLIDMN 753 (960)
T ss_dssp GCCT----TTHHHHHHHHHHHHHHHGG-GCSC-SHHHHHHH------HHHHTC----TTTH--HHHHHHHHHHHHHSCHH
T ss_pred HCCC----CCCHHHHHHHHHHHHHCHH-HHHH-HHHHHHHH------HHHHCC----CCCC--CHHHHHHHHHHHHCCHH
T ss_conf 5577----8735589999999976849-9999-99999999------999679----9420--35999999999979877
Q ss_pred HHHCCHHHHHHHHHHHHHHHCCCCHHHHH-HHHHHHHHHHH
Q ss_conf 87201240499999998751368746899-99999999996
Q 002453 813 VLAASGALLEVSFQKAAICCTAMHRGAAL-AAMSYLSCFLE 852 (920)
Q Consensus 813 ~~~s~~~~l~~il~~~l~~l~~~e~~~~~-a~~~Fl~~li~ 852 (920)
.+. +.++.++...+..+.....+..+ +.+.|+..+.-
T Consensus 754 ~~~---~yl~~i~~~l~~~l~~~~~~~~~~~~l~~~~~~~~ 791 (960)
T 1wa5_C 754 RLR---PYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISN 791 (960)
T ss_dssp HHG---GGHHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHH
T ss_pred HHH---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 789---88999999999998317747499999999999998
No 9
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=1.00 E-value=1 Score=285.80 Aligned_cols=763 Identities=13% Similarity=0.113 Sum_probs=465.8
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 18999999999960399948799999999996038699999999643598888752469889999999996036677893
Q 002453 4 DLQIKVAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYLQS 83 (920)
Q Consensus 4 ~~~~~v~~ai~~ly~~~d~~~~~~A~~~L~~~q~s~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~~~~l~~ 83 (920)
+..+++.+++...+ ++|++.|++|+++|++++++|+.|..+..++.... +.+.++|++|+..|++.|.++|..+++
T Consensus 10 ~~~~~l~~~l~~~~-s~d~~~r~~Ae~~L~~~~~~p~~~~~l~~il~~~~---~~~~~vR~~a~~~Lkn~i~~~w~~~~~ 85 (852)
T 4fdd_A 10 QGLQQILQLLKESQ-SPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLK---SEDEPTRSLSGLILKNNVKAHFQNFPN 85 (852)
T ss_dssp HHHHHHHHHHHHHT-CSCHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTCT---TSCHHHHHHHHHHHHHHTTTSGGGCCH
T ss_pred HHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 23999999999873-94989999999999998709988999999985668---898679999999999989874477999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 6799999999999997068986999999999999994602--67864999999941024888514899999843121000
Q 002453 84 AAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAV--EHGKPIEKLFYSLQNLQSQDNGNMAVLEMLTVLPEEVI 161 (920)
Q Consensus 84 ~~~~~Lr~~Ll~~l~~~~~~~~~v~~kL~~aLa~l~~~~~--~W~~~i~~l~~~l~~~~~~~~~~~~~L~~L~~l~eE~~ 161 (920)
+.+..+|+.+++.+. ..++.|+++++.+++.++.... .||+.++.++..+.+. ++......+..|..+.++..
T Consensus 86 ~~~~~ik~~ll~~l~---~~~~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l~~~--~~~~r~~al~~L~~i~~~~~ 160 (852)
T 4fdd_A 86 GVTDFIKSECLNNIG---DSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSE--DYNTCEGAFGALQKICEDSA 160 (852)
T ss_dssp HHHHHHHHHHHTTTT---CSSHHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHHSCS--SHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999874---9989999999999999998648135689999999987099--98999999999999999857
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCC
Q ss_conf 13655568997789999999974035999999996610038999763146489999999999970456656710110201
Q 002453 162 DSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHP 241 (920)
Q Consensus 162 ~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi~~~~~~~i~~~~~~~~~ 241 (920)
.. ..+. .+......++..+.+.+.. ++..++..+++|+..++... +....
T Consensus 161 ~~---------~~~~----~~~~~~~~il~~l~~~l~~--------~~~~vR~~A~~aL~~~~~~~-----~~~~~---- 210 (852)
T 4fdd_A 161 EI---------LDSD----VLDRPLNIMIPKFLQFFKH--------SSPKIRSHAVACVNQFIISR-----TQALM---- 210 (852)
T ss_dssp TH---------HHHC----SSSSCHHHHHHHHTTTTTC--------SSHHHHHHHHHHHHTTTTTT-----CHHHH----
T ss_pred HH---------HCHH----HHCCHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHHHHCC-----CHHHH----
T ss_conf 87---------5634----3133299999999998567--------97899999999999998646-----38799----
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49999974179992899999999997235793699986413237640011002798768905999999997863699981
Q 002453 242 LLNFVFNSLQVQSSFDVAIEVLVELVGRHEGLPQALLCRVPFLKELLLLPALTDGDEKVIGGLACLMSEIGQAAPSLIVE 321 (920)
Q Consensus 242 ll~~~~~~L~~~~~~~~a~~~l~eii~~~~~~~~~l~~~l~~l~~~~~~~~~~~~d~d~~~~l~~l~~~~~e~~~~~l~~ 321 (920)
+....+++.+. ....++|.+.....++.+..+++.+...+..
T Consensus 211 ------------------------------~~~~~~l~~l~--------~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~ 252 (852)
T 4fdd_A 211 ------------------------------LHIDSFIENLF--------ALAGDEEPEVRKNVCRALVMLLEVRMDRLLP 252 (852)
T ss_dssp ------------------------------TSHHHHHHHHH--------HHHTCCCHHHHHHHHHHHHHHHHHCHHHHGG
T ss_pred ------------------------------HHHHHHHHHHH--------HHCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf ------------------------------88999999999--------8717997789999999999999857798998
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 79238999999982007888873022301999999998760152455444343335119899999999997405689988
Q 002453 322 ASPEALALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSF 401 (920)
Q Consensus 322 ~~~~~~~ll~~ll~~~~~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~k~~~p~~~~ 401 (920)
....+++.++.+...+ +.++...+++||..+.+.. ......+|++.+++..++.++.|++++.
T Consensus 253 ---~l~~l~~~l~~~~~~~--~~~vr~~a~e~l~~l~~~~------------~~~~~~~~~~~~l~p~ll~~l~~~e~d~ 315 (852)
T 4fdd_A 253 ---HMHNIVEYMLQRTQDQ--DENVALEACEFWLTLAEQP------------ICKDVLVRHLPKLIPVLVNGMKYSDIDI 315 (852)
T ss_dssp ---GHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHTTST------------THHHHHTTTHHHHHHHHHHHTSCCHHHH
T ss_pred ---HHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHCCH------------HHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf ---8999999999870699--6899999999999986036------------5798878889889999998757867679
Q ss_pred ----CC-CCCCCCCCH--HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf ----99-888888851--99999999999999998608458999998543159999998036568999998422013557
Q 002453 402 ----ND-DGMVDLPDG--LVQFRMNLVELLVDICQLLRSATFIQKVFFGSWGSANVPIPWKEVETKLFALNVVSEVVLQE 474 (920)
Q Consensus 402 ----~~-~~~~d~~d~--f~~~R~~~~d~l~~~~~il~~~~~l~~~~~~~~~~~~~~~~W~~~Ea~L~~l~~iae~i~~~ 474 (920)
.| +.|.+++|+ -...|+.....+.......|.. ++..++..+.... .+.+|+..++++++++++++...+.
T Consensus 316 ~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~-~~~~l~~~l~~~l-~~~~~~~R~aa~~alg~i~~~~~~~ 393 (852)
T 4fdd_A 316 ILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDE-LLPHILPLLKELL-FHHEWVVKESGILVLGAIAEGCMQG 393 (852)
T ss_dssp HHHHC------------CCCCHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHH-TCSSHHHHHHHHHHHHHTTTTTHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHCCHHH
T ss_conf 9866984432224564011169999999999998746187-8999999999985-5998899999999999998635688
Q ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CHHCHHHHHHHHHHHCCC--CCHHHHHHHH
Q ss_conf 865554689999998316843655567899998899999943688885--633149999999981065--7157999999
Q 002453 475 GQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLADVIGSYSKWISA--FQTNARPLLLFLAAGISE--AVSSNACASA 550 (920)
Q Consensus 475 ~~~~~l~~i~~ll~~l~~~~~~~~~~~~~l~~~t~~~~ig~y~~wl~~--~p~~L~~vl~~l~~~l~~--~~v~~~Aa~a 550 (920)
-.. .++.+++.+.....++... +|.++ ++++|++++|+.. +..++.++++.++.++.+ +.++..|+.+
T Consensus 394 ~~~-~l~~~l~~l~~~l~d~~~~------Vr~~a-~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~a 465 (852)
T 4fdd_A 394 MIP-YLPELIPHLIQCLSDKKAL------VRSIT-CWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSA 465 (852)
T ss_dssp HGG-GHHHHHHHHHHHTTCSSHH------HHHHH-HHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHCCCCCHH------HHHHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 998-7999999999871799889------99999-999999998861104789999999999999858988899999999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHH-HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999310169974089999999-999727999563999999999997169925789999999888999999946403
Q 002453 551 LRKICEDASALIDEPSNLEILMWIG-EALEKRHLPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDG 629 (920)
Q Consensus 551 l~~lc~~c~~~l~~~~~~~~l~~~~-~~l~~~~l~~~~~~~l~eai~~ii~~lp~~~~~~~~l~~ll~p~~~~l~~~~~~ 629 (920)
+..+|+.|+..+. | +++.++... ..+... +......++++++.++..++..-....++..++.++++.+..+...
T Consensus 466 L~~l~~~~~~~l~-~-~l~~ll~~L~~~l~~~--~~~~~~~~~~ai~~l~~~~~~~~~~~~~~~~l~p~l~~~~~~l~d~ 541 (852)
T 4fdd_A 466 FATLEEEACTELV-P-YLAYILDTLVFAFSKY--QHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDE 541 (852)
T ss_dssp HHHHHHHHGGGGG-G-GHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHGGGGCCHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999997367667-6-7999999999999883--7479999999999999974243136789999889999998733304
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHC-------------------CCCC-CC-------CCCCCCCCCCCHH---HH
Q ss_conf 79997777952467777766777775210-------------------0133-45-------5678898888608---99
Q 002453 630 DNNHSLIHNPATYTQILSSATRGLYRMGT-------------------VFSH-LP-------VPLPTNPAGDDPI---FA 679 (920)
Q Consensus 630 ~~~~~~~~~~~~~~~~l~~~~~~l~~l~~-------------------~~~~-l~-------~~~~~~~~~~~p~---~~ 679 (920)
.. ... .++.++..++. +++. +. .+........+-. +.
T Consensus 542 ~~--------~~~-----~~~~~l~~i~~~~g~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~d~~~~~~~l~ 608 (852)
T 4fdd_A 542 DK--------DLF-----PLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALD 608 (852)
T ss_dssp CT--------THH-----HHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHH
T ss_pred CH--------HHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 69--------999-----99999999999974867988999999999999999999987533886668876119999999
Q ss_pred HH-----------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
Q ss_conf 99-----------------969999999997321054289999999999999965242576399999999985532067-
Q 002453 680 LL-----------------RVFWPMLEKLFRSEHMENGNLSTAACRALSLAIQSSGQHFVTLLPQVLDCLSTNFVSFQN- 741 (920)
Q Consensus 680 ~~-----------------~~~~~~l~~i~~~~~~~~~~i~e~~c~~~~~~~~~l~~~~~p~l~~i~~~l~~~f~~~~~- 741 (920)
.+ ..+.+.+...+. ..+..+++.+..+++.+.+.++..+.|+++.++..+...+....+
T Consensus 609 ~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~---~~~~~vr~~a~~~l~~l~~~~~~~~~~~l~~~lp~l~~~l~~~~~~ 685 (852)
T 4fdd_A 609 LLSGLAEGLGGNIEQLVARSNILTLMYQCMQ---DKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFIS 685 (852)
T ss_dssp HHHHHHHHHGGGGHHHHHTCCHHHHHHHHTT---CSSHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTCCTTSHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 9978999874769988367718999999838---9984499999999999999816888987999999999876942068
Q ss_pred -CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf -5318878999999805888874216999999756688998515687887883699999999999965248887201240
Q 002453 742 -HECYIRTASVVIEEFGHKDEYGPLFVTTFERFSQAASVRALNSSYICDQEPDLVEAYTNFASTFVRTSRKEVLAASGAL 820 (920)
Q Consensus 742 -~~~~L~l~~~li~~f~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~pD~v~~~f~l~~~~l~~~p~~~~~s~~~~ 820 (920)
.....|..+.++..+|. ++.+.+..++..+.. .+.+ ...+..+.+.....++|+.+++|..+-+ .
T Consensus 686 v~~~a~~alg~i~~~~~~--~~~p~~~~il~~L~~-----~l~~---~~~~~~~~~~a~~~igrl~~~~~~~~~~----~ 751 (852)
T 4fdd_A 686 VCNNATWAIGEISIQMGI--EMQPYIPMVLHQLVE-----IINR---PNTPKTLLENTAITIGRLGYVCPQEVAP----M 751 (852)
T ss_dssp HHHHHHHHHHHHHHHHGG--GGGGGTHHHHHHHHH-----HHTC---SSCCHHHHHHHHHHHHHHHHHCHHHHGG----G
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH-----HHCC---CCCCCHHHHHHHHHHHHHHHHCHHHHCC----C
T ss_conf 999999999999997117--678789999999999-----8579---9887207788999999999868897675----5
Q ss_pred HHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHCC----------CCCCCCCCCHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 4999999987513-68746899999999999964543115----------889999983078999999982017999999
Q 002453 821 LEVSFQKAAICCT-AMHRGAALAAMSYLSCFLEECLASLL----------GYTTSIPEGSFNAMAIQVISHSGEGLVSNV 889 (920)
Q Consensus 821 l~~il~~~l~~l~-~~e~~~~~a~~~Fl~~li~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~G~~Lv~~l 889 (920)
+..+++..+.+|. ..+.+-..++.+-+..++...-.... .++..|+ .+.++.+.++++.+...+-...
T Consensus 752 l~~~~~~~~~~l~~~~d~~e~~~a~~~l~~li~~~p~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~l~~~~~~~~~~~ 830 (852)
T 4fdd_A 752 LQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDEN 830 (852)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHTCSSCC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHCCCHH
T ss_conf 899999999986536660799999999999998691868888999999987068997-8999999999999987677201
Q ss_pred HHHHCCCCCCCCHHHH
Q ss_conf 9995367841113336
Q 002453 890 VYALLGVSAMSRVNTS 905 (920)
Q Consensus 890 l~~~~g~~prs~l~~~ 905 (920)
...+.+..|......+
T Consensus 831 ~~~~~~~~~~~~~~~l 846 (852)
T 4fdd_A 831 WRRFSDQFPLPLKERL 846 (852)
T ss_dssp HHHHGGGCCHHHHHHH
T ss_pred HHHHHHHCCHHHHHHH
T ss_conf 9999872999999999
No 10
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=1.00 E-value=1 Score=267.51 Aligned_cols=717 Identities=12% Similarity=0.109 Sum_probs=451.6
Q ss_pred CHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHCC--HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC--
Q ss_conf 51899999999996-0399948799999999996038--699999999643598888752469889999999996036--
Q 002453 3 MDLQIKVAQAVHVL-NHDTESCNRVAANQWLVQFQQT--DAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNE-- 77 (920)
Q Consensus 3 ~~~~~~v~~ai~~l-y~~~d~~~~~~A~~~L~~~q~s--~~aw~~~~~lL~~~~~~~~~~~~v~ffaA~tL~~ki~~~-- 77 (920)
|+.+ ++.+++..+ + ++|++.|++|+++|++++++ |+.|..+.+++...+ .+.++|+||+++|+++|.++
T Consensus 1 Md~~-~l~~~L~~~~~-s~d~~~r~~Ae~~L~~~~~~~~~~~~~~l~~il~~~~----~~~~vR~~A~~~lk~~i~~~w~ 74 (861)
T 2bpt_A 1 MSTA-EFAQLLENSIL-SPDQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDEN----TKLEGRILAALTLKNELVSKDS 74 (861)
T ss_dssp CCHH-HHHHHHHHHHH-CSSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCTT----SCHHHHHHHHHHHHTTTCCSSH
T ss_pred CCHH-HHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHHHHCCCCCH
T ss_conf 9877-99999997426-9397999999999999985199999999999983789----9867999999998702257574
Q ss_pred ---------CCC-CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-C--CCCCHHHHHHHHHHHCCCCCC
Q ss_conf ---------677-893679999999999999706898699999999999999460-2--678649999999410248885
Q 002453 78 ---------GYY-LQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRA-V--EHGKPIEKLFYSLQNLQSQDN 144 (920)
Q Consensus 78 ---------~~~-l~~~~~~~Lr~~Ll~~l~~~~~~~~~v~~kL~~aLa~l~~~~-~--~W~~~i~~l~~~l~~~~~~~~ 144 (920)
|.. ++++.+..+|+.|++.+. ..++.++++++.+++.++... + .||+.++.++..+.+.. ++.
T Consensus 75 ~~~~~~~~~~~~~l~~~~~~~ik~~ll~~l~---~~~~~vr~~~~~~l~~i~~~~~p~~~w~~ll~~L~~~l~~~~-~~~ 150 (861)
T 2bpt_A 75 VKTQQFAQRWITQVSPEAKNQIKTNALTALV---SIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQ-PEN 150 (861)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHT---CSSHHHHHHHHHHHHHHHHHHGGGTCCHHHHHHHHHHTSTTS-CHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC-CHH
T ss_conf 8789999767662999999999999999877---996379999999999999846764554999999999872689-789
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 14899999843121000136555689977899999999740359999999966100389997631464899999999999
Q 002453 145 GNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWV 224 (920)
Q Consensus 145 ~~~~~L~~L~~l~eE~~~~~~~~~~l~~~~r~~~~~~l~~~~~~v~~~l~~~l~~~~~~~~~~~~~~~~~~~l~c~~sWi 224 (920)
.....+.++..+.+++... . | .+....+.++..+.+.+.... ++..++..+++|+.+|+
T Consensus 151 ~r~~al~~l~~l~~~~~~~------~----~-----~~~~~~~~ll~~l~~~l~~~~------~~~~vr~~al~~l~~~~ 209 (861)
T 2bpt_A 151 VKRASLLALGYMCESADPQ------S----Q-----ALVSSSNNILIAIVQGAQSTE------TSKAVRLAALNALADSL 209 (861)
T ss_dssp HHHHHHHHHHHHHHTSSTT------S----S-----TTGGGHHHHHHHHHHHHSTTC------CCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHCCCHH------H----H-----HHHHHHHHHHHHHHHHHCCCC------CCHHHHHHHHHHHHHHH
T ss_conf 9999999999999727843------5----6-----789889999999998415799------98789999999999999
Q ss_pred HCCCCCCCCCCHHC---CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHH
Q ss_conf 70456656710110---201499999741799928999999999972357936999864132376400110027987689
Q 002453 225 RAGCFTEISQGSLA---AHPLLNFVFNSLQVQSSFDVAIEVLVELVGRHEGLPQALLCRVPFLKELLLLPALTDGDEKVI 301 (920)
Q Consensus 225 ~~~~~~~i~~~~~~---~~~ll~~~~~~L~~~~~~~~a~~~l~eii~~~~~~~~~l~~~l~~l~~~~~~~~~~~~d~d~~ 301 (920)
.+. ....-. ...+++.++. ...+++.+..
T Consensus 210 ~~~-----~~~~~~~~~~~~ll~~l~~-------------------------------------------~~~~~~~~~r 241 (861)
T 2bpt_A 210 IFI-----KNNMEREGERNYLMQVVCE-------------------------------------------ATQAEDIEVQ 241 (861)
T ss_dssp GGC-----HHHHTSHHHHHHHHHHHHH-------------------------------------------HHTCSCHHHH
T ss_pred HHH-----HHHCCCHHHHHHHHHHHHH-------------------------------------------HHCCCCHHHH
T ss_conf 999-----9870676689999999999-------------------------------------------8659988999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHH--HHHH-HHH
Q ss_conf 05999999997863699981792389-9999998200788887302230199999999876015245544--4343-335
Q 002453 302 GGLACLMSEIGQAAPSLIVEASPEAL-ALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASIAK--NKKH-VED 377 (920)
Q Consensus 302 ~~l~~l~~~~~e~~~~~l~~~~~~~~-~ll~~ll~~~~~p~~d~~v~~~~~~FW~~l~~~l~~~~~~~~~--~~~~-~~~ 377 (920)
...++.+..+++.+...+.. ... .+++.++.....+ +.++...+++||..+.+........... ..+. ...
T Consensus 242 ~~a~~~l~~l~~~~~~~~~~---~l~~~l~~~~~~~~~~~--~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (861)
T 2bpt_A 242 AAAFGCLCKIMSKYYTFMKP---YMEQALYALTIATMKSP--NDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYN 316 (861)
T ss_dssp HHHHHHHHHHHHHHGGGCHH---HHHHTHHHHHHHHTTCS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99999999999998899999---88999999999987377--27899999999999998788643332103577325699
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 11989999999999740568998899888888851999999999999999986084589999985431599999980365
Q 002453 378 MFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGLVQFRMNLVELLVDICQLLRSATFIQKVFFGSWGSANVPIPWKEV 457 (920)
Q Consensus 378 ~~~~~~~~ll~~l~~k~~~p~~~~~~~~~~d~~d~f~~~R~~~~d~l~~~~~il~~~~~l~~~~~~~~~~~~~~~~W~~~ 457 (920)
..++++..++..++.+++.++++. +++++ ..|+...+.+......+|.. .+..++..+.... .+.+|+..
T Consensus 317 ~~~~~~~~il~~ll~~l~~~~~d~-------~d~~~-~~r~~a~~~L~~l~~~~~~~-~~~~l~~~l~~~l-~~~~~~~r 386 (861)
T 2bpt_A 317 FALSSIKDVVPNLLNLLTRQNEDP-------EDDDW-NVSMSAGACLQLFAQNCGNH-ILEPVLEFVEQNI-TADNWRNR 386 (861)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCC--------CCCCC-HHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHT-TCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCC-------CCCCC-CHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHC-CCCCHHHH
T ss_conf 999999889999999987066530-------12468-68999999999999874086-8999999999875-79972699
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---HHCHHHHHHHH
Q ss_conf 689999984220135578655546899999983168436555678999988999999436888856---33149999999
Q 002453 458 ETKLFALNVVSEVVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLADVIGSYSKWISAF---QTNARPLLLFL 534 (920)
Q Consensus 458 Ea~L~~l~~iae~i~~~~~~~~l~~i~~ll~~l~~~~~~~~~~~~~l~~~t~~~~ig~y~~wl~~~---p~~L~~vl~~l 534 (920)
|+++++++++++...++.-...++.+++.+.....++... +|.++ ++++|+++.++..+ +.+++.+++.+
T Consensus 387 ~~a~~~l~~i~~~~~~~~~~~~l~~il~~l~~~l~d~~~~------vr~~a-~~~l~~l~~~~~~~~~~~~~~~~~l~~l 459 (861)
T 2bpt_A 387 EAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQ------VKETT-AWCIGRIADSVAESIDPQQHLPGVVQAC 459 (861)
T ss_dssp HHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHH------HHHHH-HHHHHHHHHHHGGGSCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH------HHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 9999999999859987888998999999999882899599------99999-9999999987354048788899999999
Q ss_pred HHHCCC-CCHHHHHHHHHHHHHHHHH----CCCCCCCCHHHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 981065-7157999999999999931----016997408999999-9999727999563999999999997169925789
Q 002453 535 AAGISE-AVSSNACASALRKICEDAS----ALIDEPSNLEILMWI-GEALEKRHLPLEDEEEVVGAISLILGSVSNKELK 608 (920)
Q Consensus 535 ~~~l~~-~~v~~~Aa~al~~lc~~c~----~~l~~~~~~~~l~~~-~~~l~~~~l~~~~~~~l~eai~~ii~~lp~~~~~ 608 (920)
+.++.+ +.++..|+.++..+|+.|. ..+. ++++.++.. ...+.....+...+...+++++.++...+.. .
T Consensus 460 ~~~l~~~~~v~~~a~~al~~l~~~~~~~~~~~l~--~~~~~il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~~~~--~ 535 (861)
T 2bpt_A 460 LIGLQDHPKVATNCSWTIINLVEQLAEATPSPIY--NFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDT--V 535 (861)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHSSSSSCGGG--GGHHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCCGG--G
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH--HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHH--H
T ss_conf 9976447289999999999999862313542468--99999999999998575861589999999999999976265--6
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999988899999994640379997777952467777766777775210013345567889888860899999699999
Q 002453 609 NNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYTQILSSATRGLYRMGTVFSHLPVPLPTNPAGDDPIFALLRVFWPML 688 (920)
Q Consensus 609 ~~~l~~ll~p~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l 688 (920)
..++..++.+++..+...+..........+........ ...+..++.+.+.+... +.+....+++.+
T Consensus 536 ~~~~~~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~l~~l~~~~~~~----------~~~~~~~l~~~l 602 (861)
T 2bpt_A 536 AETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQ---SNILTVLAAVIRKSPSS----------VEPVADMLMGLF 602 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHH---HHHHHHHHHHHHHCGGG----------TGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHH
T ss_conf 99999999999999998875320138855677799999---99999999999985563----------478999999999
Q ss_pred HHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 999973210542-89999999999999965242576399999999985532067--531887899999980588887421
Q 002453 689 EKLFRSEHMENG-NLSTAACRALSLAIQSSGQHFVTLLPQVLDCLSTNFVSFQN--HECYIRTASVVIEEFGHKDEYGPL 765 (920)
Q Consensus 689 ~~i~~~~~~~~~-~i~e~~c~~~~~~~~~l~~~~~p~l~~i~~~l~~~f~~~~~--~~~~L~l~~~li~~f~~~~~~~~~ 765 (920)
..++.. . +. .+.+.++.++.......|..+.|+++.+++.+...+....+ ....+.+.+.++...|. .+.+.
T Consensus 603 ~~~l~~-~--~~~~v~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~--~~~~~ 677 (861)
T 2bpt_A 603 FRLLEK-K--DSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEE--DFRRY 677 (861)
T ss_dssp HHHHHS-T--TGGGTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGG--GGHHH
T ss_pred HHHHCC-C--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCH--HCCCH
T ss_conf 999746-7--887579999999999999976609999999999999886556678999999999999987454--03111
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC---------
Q ss_conf 69999997566889985156878878836999999999999652488872012404999999987513687---------
Q 002453 766 FVTTFERFSQAASVRALNSSYICDQEPDLVEAYTNFASTFVRTSRKEVLAASGALLEVSFQKAAICCTAMH--------- 836 (920)
Q Consensus 766 ~~~l~~~l~~~~~~~~l~~~~~~~~~pD~v~~~f~l~~~~l~~~p~~~~~s~~~~l~~il~~~l~~l~~~e--------- 836 (920)
+..++..+ +..+.. ...++++....+..+..+..+.+..|.+ .++.++...+..+....
T Consensus 678 ~~~l~~~l-----~~~l~~---~~~~~~vr~~~~~~l~~l~~~~~~~~~~----~l~~~l~~l~~~~~~~~~~~d~d~~~ 745 (861)
T 2bpt_A 678 SDAMMNVL-----AQMISN---PNARRELKPAVLSVFGDIASNIGADFIP----YLNDIMALCVAAQNTKPENGTLEALD 745 (861)
T ss_dssp HHHHHHHH-----HHHHHC---TTCCTTHHHHHHHHHHHHHHHHGGGGHH----HHHHHHHHHHHHHTCCCSSSSHHHHH
T ss_pred HHHHHHHH-----HHHHCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 99999999-----997278---6556766599999999999984050899----99999999999973678999758899
Q ss_pred --HHHHHHHHHHHHHHHHHH
Q ss_conf --468999999999999645
Q 002453 837 --RGAALAAMSYLSCFLEEC 854 (920)
Q Consensus 837 --~~~~~a~~~Fl~~li~~~ 854 (920)
...-.++++.+..++...
T Consensus 746 ~~~~vr~~~l~~~~~i~~~l 765 (861)
T 2bpt_A 746 YQIKVLEAVLDAYVGIVAGL 765 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998
Done!