Query 002459
Match_columns 919
No_of_seqs 605 out of 5050
Neff 10.0
Searched_HMMs 29240
Date Tue Mar 26 15:45:42 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002459.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1182-1186//hhsearch_pdb/002459hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3now_A UNC-45 protein, SD10334 1.0 1 1 322.0 30.6 443 383-863 251-737 (810)
2 3now_A UNC-45 protein, SD10334 1.0 1 1 317.9 37.8 441 375-859 286-778 (810)
3 3l6x_A Catenin delta-1; cateni 1.0 1 1 313.5 34.8 371 376-758 45-478 (584)
4 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 306.3 36.4 471 360-865 37-529 (644)
5 1jdh_A Beta-catenin; beta-cate 1.0 1 1 304.4 39.0 363 372-753 51-423 (529)
6 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 302.5 40.9 366 371-755 90-485 (644)
7 2z6g_A B-catenin; FULL-length, 1.0 1 1 302.4 36.3 458 374-863 186-663 (780)
8 3ul1_B Importin subunit alpha- 1.0 1 1 301.6 38.3 411 381-864 59-480 (510)
9 1jdh_A Beta-catenin; beta-cate 1.0 1 1 301.3 38.7 441 376-862 14-488 (529)
10 1xm9_A Plakophilin 1; armadill 1.0 1 1 298.8 34.2 396 380-861 3-447 (457)
No 1
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=321.97 Aligned_cols=443 Identities=19% Similarity=0.186 Sum_probs=351.6
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 99985206999999999999976202578775423046999997097999999970299989999999999940595789
Q 002459 383 LLLSLMQSTQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKSWREGLQSEAAKAIANLSVNAKVA 462 (919)
Q Consensus 383 ~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s~~~~~~~~a~~~L~~l~~~~~~~ 462 (919)
.+-..+...+.+....|++++..+..+..+. ....+...|+++.++.++.++++.++..|++++++++.++++|
T Consensus 251 ~~~~~~~~~~~~~~~~a~~alt~i~~g~~~~------~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~~~~~R 324 (810)
T 3now_A 251 YIKDKLLAPDMESKVRVTVAITALLNGPLDV------GNQVVAREGILQMILAMATTDDELQQRVACECLIAASSKKDKA 324 (810)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHHSSSHHH------HHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH------HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
T ss_conf 9999854687376899999999996598988------8999832026999999867997889999999999981890999
Q ss_pred HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC--CCHHHHHHHCC----HHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 99998094999999993089999999999997621686--63799997167----9999999840078998999999999
Q 002459 463 KAVAEEGGINILAVLARSMNRLVAEEAAGGLWNLSVGE--EHKGAIADAGG----VKALVDLIFKWSSGGDGVLERAAGA 536 (919)
Q Consensus 463 ~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~~--~~~~~i~~~g~----i~~L~~ll~~~~~~~~~~~~~a~~~ 536 (919)
..+.+.|+ +.|+.++++++..++..|+.+|++++... +......+.|+ ++.++++|.+ ...+.++++.++++
T Consensus 325 ~~I~~~gv-~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~-~~~d~~v~~~Avea 402 (810)
T 3now_A 325 KALCEQGV-DILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIK-PGKDKDIRRWAADG 402 (810)
T ss_dssp HTTHHHHH-HHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHC-SSCCSSHHHHHHHH
T ss_pred HHHHHCCC-HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCC-CCCCHHHHHHHHHH
T ss_conf 99998696-79999874897889999999999744144668653532004499999999998657-89987899999999
Q ss_pred HHHHHCCCCCHHHHHH-CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC-------------------------
Q ss_conf 9996149966599996-18099999998129945899999999999742899887-------------------------
Q 002459 537 LANLAADDKCSMEVAL-AGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNS------------------------- 590 (919)
Q Consensus 537 L~~L~~~~~~~~~i~~-~g~i~~Lv~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~------------------------- 590 (919)
|.+|+.+++.+..++. .|+++.|+.++.+++ +.++..++++|.|++...+...
T Consensus 403 LayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~d-~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~ 481 (810)
T 3now_A 403 LAYLTLDAECKEKLIEDKASIHALMDLARGGN-QSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDV 481 (810)
T ss_dssp HHHHTTSHHHHHHHHHCHHHHHHHHHHHHTTC-GGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHH
T ss_pred HHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 99983792789999982064999999967998-18999999999998579602121289999998764247655643317
Q ss_pred -CCC---CHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf -641---0210014499999980799988999999999961189100999997498899999972038999889999999
Q 002459 591 -NNS---AVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAAAGGVEALVVLAQSCSNASPGLQERAAG 666 (919)
Q Consensus 591 -~~~---~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~Ls~~~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~A~~ 666 (919)
.++ ..+.+.|+++.|+.++.++++.+++.|+++|.|++.+++++..+++.|++++|+.++.+ +++..++.|++
T Consensus 482 ~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s---~~~~~k~~Aa~ 558 (810)
T 3now_A 482 DFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALE---GTEKGKRHATQ 558 (810)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHS---SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC---CCHHHHHHHHH
T ss_conf 777999999998859999999985999899999999999985898899999987899999999705---98889999999
Q ss_pred HHHHCCCCCCHHHHHH---HCCCHHHHHHHHCCC-CHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHHCCCCH
Q ss_conf 9997013762146887---208959999987149-999999999999997189-23288999829989999977118989
Q 002459 667 ALWGLSVSEANCIAIG---REGGVAPLIALARSE-AEDVHETAAGALWNLAFN-PGNALRIVEEGGVPALVHLCSSSGSK 741 (919)
Q Consensus 667 ~L~~l~~~~~~~~~i~---~~g~i~~L~~ll~~~-~~~v~~~a~~aL~~l~~~-~~~~~~l~~~~~i~~Lv~ll~~~~~~ 741 (919)
+|.+++.+......+. ..|++++|+.+|.++ +...+..|+.+|.||+.. ++++..+++.|+++.|++++.+++ +
T Consensus 559 AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~-~ 637 (810)
T 3now_A 559 ALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDH-L 637 (810)
T ss_dssp HHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCC-T
T ss_pred HHHHHHCCCCHHHHHCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC-H
T ss_conf 999996589856653100231579999998678982788999999999984699899999998688899999982899-9
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 9999999999996379971157650456666640014579873698899999850--79467898873055046688667
Q 002459 742 MARFMAALALAYMFDGRMDEFALIGTSTESTSKCVSLDGARRMALKHIEAFVLTF--SDPQAFATAAASSAPAALTQVTE 819 (919)
Q Consensus 742 ~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~lv~~~--~~~~~~~~a~~a~a~~~~~~~~~ 819 (919)
.+|..|+++++|+..+.... .. .+.. .+.+..++... .+...+..|+++++.++-++...
T Consensus 638 ~Vq~~A~~~L~NLa~~~~~~-~~----------~v~~-------~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~ 699 (810)
T 3now_A 638 YLTRAAAQCLCNLVMSEDVI-KM----------FEGN-------NDRVKFLALLCEDEDEETATACAGALAIITSVSVKC 699 (810)
T ss_dssp THHHHHHHHHHHHTTSHHHH-HH----------HHSS-------SSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHCCHHHH-HH----------HHHC-------CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999999996795999-99----------9861-------680899999846999899999999999986799899
Q ss_pred HHHHHC-CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf 653201-46433321136799998309805788558778775146
Q 002459 820 RARIQE-AGHLRCSGAEIGRFITMLRNPSSVLKSCAAFALLQFTI 863 (919)
Q Consensus 820 ~~~i~~-~g~~~~~~~~i~~l~~~l~~~~~~~r~~aa~al~~~~~ 863 (919)
.+.+.+ +| ++++|++++++++..+|..|+|++.+++.
T Consensus 700 ~~~ii~~~g-------~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~ 737 (810)
T 3now_A 700 CEKILAIAS-------WLDILHTLIANPSPAVQHRGIVIILNMIN 737 (810)
T ss_dssp HHHHHTSTT-------HHHHHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCC-------CHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 999998748-------89899998779988999999999999986
No 2
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=317.94 Aligned_cols=441 Identities=18% Similarity=0.144 Sum_probs=329.9
Q ss_pred HHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99730199999852069999999999999762025787754230469999970979999999702999899999999999
Q 002459 375 FWLKQGAGLLLSLMQSTQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKSWREGLQSEAAKAIAN 454 (919)
Q Consensus 375 ~~~~~gi~~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s~~~~~~~~a~~~L~~ 454 (919)
|..++.++.++.++.++++.+|..|++++...+.. +.++..+.+.|+ +.|+.+++++++.++..|+.+|.+
T Consensus 286 ~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~~--------~~~R~~I~~~gv-~~L~~Ll~s~~~~vr~~Al~~L~k 356 (810)
T 3now_A 286 VAREGILQMILAMATTDDELQQRVACECLIAASSK--------KDKAKALCEQGV-DILKRLYHSKNDGIRVRALVGLCK 356 (810)
T ss_dssp HHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTS--------HHHHHTTHHHHH-HHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC--------CHHHHHHHHCCC-HHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 83202699999986799788999999999998189--------099999998696-799998748978899999999997
Q ss_pred HHCCH--HHHHHHHHHCC----HHHHHHHHHCC--CHHHHHHHHHHHHHHCCCCCCHHHHHH-HCCHHHHHHHHHCCCCC
Q ss_conf 40595--78999998094----99999999308--999999999999762168663799997-16799999998400789
Q 002459 455 LSVNA--KVAKAVAEEGG----INILAVLARSM--NRLVAEEAAGGLWNLSVGEEHKGAIAD-AGGVKALVDLIFKWSSG 525 (919)
Q Consensus 455 l~~~~--~~~~~i~~~g~----i~~Lv~lL~~~--~~~~~~~a~~~L~~Ls~~~~~~~~i~~-~g~i~~L~~ll~~~~~~ 525 (919)
++.+. +......+.|+ ++.++++|.++ +.++++.|+++|.+|+.+++.+..++. .|+++.|+.++.+ .
T Consensus 357 l~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s---~ 433 (810)
T 3now_A 357 LGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARG---G 433 (810)
T ss_dssp HHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHT---T
T ss_pred HCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCC---C
T ss_conf 4414466865353200449999999999865789987899999999999837927899999820649999999679---9
Q ss_pred CHHHHHHHHHHHHHHHCCCC------------------------------CH---HHHHHCCHHHHHHHHHHCCCCHHHH
Q ss_conf 98999999999999614996------------------------------65---9999618099999998129945899
Q 002459 526 GDGVLERAAGALANLAADDK------------------------------CS---MEVALAGGVHALVMLARSCKFEGVQ 572 (919)
Q Consensus 526 ~~~~~~~a~~~L~~L~~~~~------------------------------~~---~~i~~~g~i~~Lv~ll~~~~~~~~~ 572 (919)
+..++..++++|.|++.+.+ .. +.+++.|+++.|+.++.+++ +.++
T Consensus 434 d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s-~~vq 512 (810)
T 3now_A 434 NQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTES-HNSQ 512 (810)
T ss_dssp CGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCC-HHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCC-HHHH
T ss_conf 818999999999998579602121289999998764247655643317777999999998859999999985999-8999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH---HHCCCHHHHHHH
Q ss_conf 99999999974289988764102100144999999807999889999999999611891009999---974988999999
Q 002459 573 EQAARALANLAAHGDSNSNNSAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAI---AAAGGVEALVVL 649 (919)
Q Consensus 573 ~~a~~~L~~L~~~~~~~~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~Ls~~~~~~~~l---~~~g~i~~Li~l 649 (919)
+.++++|.|++. +.+++..+.+.|++++|+.++.++++..++.|+++|.+++........+ ...+++++|+.+
T Consensus 513 e~Aa~aL~NLA~----d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~L 588 (810)
T 3now_A 513 ELIARVLNAVCG----LKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNL 588 (810)
T ss_dssp HHHHHHHHHHHT----SHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHCC----CHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCHHHHHHHH
T ss_conf 999999999858----9889999998789999999970598889999999999996589856653100231579999998
Q ss_pred HHHCCCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH-CCC
Q ss_conf 7203899988999999999970137-62146887208959999987149999999999999997189232889998-299
Q 002459 650 AQSCSNASPGLQERAAGALWGLSVS-EANCIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVE-EGG 727 (919)
Q Consensus 650 L~~~~~~~~~~~~~A~~~L~~l~~~-~~~~~~i~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~-~~~ 727 (919)
|.+ ..+...+..|+++|.||+.. ++++..+.+.|+++.|+.++.++++.++..|+++|+|++.+++.+..+++ .|+
T Consensus 589 L~~--~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~ 666 (810)
T 3now_A 589 LQQ--DCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDR 666 (810)
T ss_dssp TST--TSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSH
T ss_pred HCC--CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 678--982788999999999984699899999998688899999982899999999999999996795999999861680
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHC--CCHHHHHHH
Q ss_conf 899999771189899999999999996379971157650456666640014579873698899999850--794678988
Q 002459 728 VPALVHLCSSSGSKMARFMAALALAYMFDGRMDEFALIGTSTESTSKCVSLDGARRMALKHIEAFVLTF--SDPQAFATA 805 (919)
Q Consensus 728 i~~Lv~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~lv~~~--~~~~~~~~a 805 (919)
++.|+.++.+++ ..+|..|+++|+++..+....... .+... +++++++... .+...+..|
T Consensus 667 l~~Lv~LL~s~d-~~vq~~Aa~ALanLt~~s~~~~~~----------ii~~~-------g~I~~Lv~LL~s~d~~vq~~A 728 (810)
T 3now_A 667 VKFLALLCEDED-EETATACAGALAIITSVSVKCCEK----------ILAIA-------SWLDILHTLIANPSPAVQHRG 728 (810)
T ss_dssp HHHHHHGGGCSS-HHHHHHHHHHHHHHHHHCHHHHHH----------HHTST-------THHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCHHHHHH----------HHHHC-------CCHHHHHHHHCCCCHHHHHHH
T ss_conf 899999846999-899999999999986799899999----------99874-------889899998779988999999
Q ss_pred HHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC---CHHHHHHHHHHHH
Q ss_conf 73055046688667653201464333211367999983098---0578855877877
Q 002459 806 AASSAPAALTQVTERARIQEAGHLRCSGAEIGRFITMLRNP---SSVLKSCAAFALL 859 (919)
Q Consensus 806 ~~a~a~~~~~~~~~~~~i~~~g~~~~~~~~i~~l~~~l~~~---~~~~r~~aa~al~ 859 (919)
+.++..++..+....+.+.++| ++++|+++++.+ +..+...|..+|.
T Consensus 729 ~~aL~NL~~~s~e~~~~l~e~G-------~i~~L~~LL~~~d~~~~~i~e~Al~aL~ 778 (810)
T 3now_A 729 IVIILNMINAGEEIAKKLFETD-------IMELLSGLGQLPDDTRAKAREVATQCLA 778 (810)
T ss_dssp HHHHHHHHTTCHHHHHHHHTST-------HHHHHTTSCCCTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHCC-------CHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 9999999869999999999897-------8899999982766576799999999999
No 3
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=1.00 E-value=1 Score=313.50 Aligned_cols=371 Identities=23% Similarity=0.261 Sum_probs=315.8
Q ss_pred HHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 97301999998520699999999999997620257877542304699999709799999997029998999999999994
Q 002459 376 WLKQGAGLLLSLMQSTQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKSWREGLQSEAAKAIANL 455 (919)
Q Consensus 376 ~~~~gi~~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s~~~~~~~~a~~~L~~l 455 (919)
|...+|+.||++|.++++++|..|+.+|.+++..+++ ++..+.+.|+||.|+++|++++..++..|+++|.+|
T Consensus 45 ~~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~-------~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nL 117 (584)
T 3l6x_A 45 WRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDK-------VKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNI 117 (584)
T ss_dssp CCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHH-------HHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH-------HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 6644399999997799999999999999999808959-------999999859907999987799989999999999998
Q ss_pred HC--CHHHHHHHHHHCCHHHHHHHHHC-CCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCC----------
Q ss_conf 05--95789999980949999999930-899999999999976216866379999716799999998400----------
Q 002459 456 SV--NAKVAKAVAEEGGINILAVLARS-MNRLVAEEAAGGLWNLSVGEEHKGAIADAGGVKALVDLIFKW---------- 522 (919)
Q Consensus 456 ~~--~~~~~~~i~~~g~i~~Lv~lL~~-~~~~~~~~a~~~L~~Ls~~~~~~~~i~~~g~i~~L~~ll~~~---------- 522 (919)
+. +++++..|++.|+|++|+++|++ .+.++++.++.+|++|+..++++..|++ +++++|++++..+
T Consensus 118 a~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~-~alp~Lv~LL~~p~sg~~~~~~~ 196 (584)
T 3l6x_A 118 SFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVD-HALHALTDEVIIPHSGWEREPNE 196 (584)
T ss_dssp TSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHH-HTHHHHHHHTHHHHHCCC-----
T ss_pred HCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 73598899999998589999999976799999999999999998579613689986-30899999983133454334332
Q ss_pred -----CCCCHHHHHHHHHHHHHHHCCCC-CHHHHHHC-CHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHCCCC---
Q ss_conf -----78998999999999999614996-65999961-8099999998129-----945899999999999742899---
Q 002459 523 -----SSGGDGVLERAAGALANLAADDK-CSMEVALA-GGVHALVMLARSC-----KFEGVQEQAARALANLAAHGD--- 587 (919)
Q Consensus 523 -----~~~~~~~~~~a~~~L~~L~~~~~-~~~~i~~~-g~i~~Lv~ll~~~-----~~~~~~~~a~~~L~~L~~~~~--- 587 (919)
...+..+++.|+++|.||+.+.+ ++..+++. |+++.|+.++.+. .+...+++|+++|+||+...+
T Consensus 197 ~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~ 276 (584)
T 3l6x_A 197 DCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREI 276 (584)
T ss_dssp -----CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 11124555499999999999999638878899999848958999999987401367438899999999998642321014
Q ss_pred -------------------CCCCCCCHHHCCCHHHHHHHHHC-CCCHHHHHHHHHHHHHHCCCC-----CCHHHHHHCCC
Q ss_conf -------------------88764102100144999999807-999889999999999611891-----00999997498
Q 002459 588 -------------------SNSNNSAVGQEAGALEALVQLTR-SPHEGVRQEAAGALWNLSFDD-----RNREAIAAAGG 642 (919)
Q Consensus 588 -------------------~~~~~~~~~~~~~~i~~Lv~ll~-~~~~~~~~~a~~~L~~Ls~~~-----~~~~~l~~~g~ 642 (919)
........+...++++.|+.++. +.++.+++.|+++|+||+... ..+..+.+.++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~g 356 (584)
T 3l6x_A 277 PQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKA 356 (584)
T ss_dssp TTCCC--------------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHH
T ss_pred CCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
T ss_conf 52455543024334453114721178881600799999997147878899999999999872886453899999998376
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCC--------CHHHHHHHHHHHHHHCC
Q ss_conf 8999999720389998899999999997013762146887208959999987149--------99999999999999718
Q 002459 643 VEALVVLAQSCSNASPGLQERAAGALWGLSVSEANCIAIGREGGVAPLIALARSE--------AEDVHETAAGALWNLAF 714 (919)
Q Consensus 643 i~~Li~lL~~~~~~~~~~~~~A~~~L~~l~~~~~~~~~i~~~g~i~~L~~ll~~~--------~~~v~~~a~~aL~~l~~ 714 (919)
++.|+.+|.+ ++..++..|+++|+||+....++..| ..|+++.|+++|.++ ..++...|+++|.|++.
T Consensus 357 lp~Lv~LL~s---~~~~v~~~A~~aL~nLs~~~~~~~~I-~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a 432 (584)
T 3l6x_A 357 LSAIADLLTN---EHERVVKAASGALRNLAVDARNKELI-GKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIA 432 (584)
T ss_dssp HHHHHHGGGC---SCHHHHHHHHHHHHHHHTTCSCHHHH-HHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCC---CCHHHHHHHHHHHHHHHCCHHHHHHH-HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9999999848---98799999999999983782379999-8088899999846775554431009999999999999863
Q ss_pred -CCCCHHHHHHCCCHHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCC
Q ss_conf -923288999829989999977118-98999999999999963799
Q 002459 715 -NPGNALRIVEEGGVPALVHLCSSS-GSKMARFMAALALAYMFDGR 758 (919)
Q Consensus 715 -~~~~~~~l~~~~~i~~Lv~ll~~~-~~~~~~~~a~~~L~~l~~~~ 758 (919)
+++++..+.+.|+|+.|++++.++ .++.++..|+++|++|....
T Consensus 433 ~~~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl~~~~ 478 (584)
T 3l6x_A 433 ENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYK 478 (584)
T ss_dssp TCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHTSH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCH
T ss_conf 8989999999789869999997478987689999999999998199
No 4
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=306.27 Aligned_cols=471 Identities=21% Similarity=0.233 Sum_probs=372.0
Q ss_pred HHHHHHHCCCCCHHHHHHH-HCHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
Q ss_conf 8887431398891689973-019999985206-99999999999997620257877542304699999709799999997
Q 002459 360 ILLRTAESNPQGLDDFWLK-QGAGLLLSLMQS-TQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLA 437 (919)
Q Consensus 360 ~l~~~~~~~~~~~~~~~~~-~gi~~Lv~lL~~-~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L 437 (919)
.+..++..+. ....+... ++++.|++.|.+ .+++++..|+.+|.+|+.. +.++..+.+.|+++.|+++|
T Consensus 37 ~L~~La~~~~-~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~--------~~~~~~i~~~g~i~~Lv~lL 107 (644)
T 2z6h_A 37 MVHQLSKKEA-SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH--------REGLLAIFKSGGIPALVKML 107 (644)
T ss_dssp HHHHHHTSTT-HHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTS--------HHHHHHHHTTTHHHHHHHHT
T ss_pred HHHHHHCCCH-HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC--------HHHHHHHHHCCCHHHHHHHH
T ss_conf 9999977875-39999865076999999986489999999999999998469--------16589999859899999998
Q ss_pred CCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHCCHHHH
Q ss_conf 02999899999999999405-95789999980949999999930899999999999976216-86637999971679999
Q 002459 438 KSWREGLQSEAAKAIANLSV-NAKVAKAVAEEGGINILAVLARSMNRLVAEEAAGGLWNLSV-GEEHKGAIADAGGVKAL 515 (919)
Q Consensus 438 ~s~~~~~~~~a~~~L~~l~~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~-~~~~~~~i~~~g~i~~L 515 (919)
+++++.++..|+++|.+++. ++..+..+.+.|+++.|++++++++..++..++.+|.+++. +++++..+.+.|+++.|
T Consensus 108 ~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~L 187 (644)
T 2z6h_A 108 GSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQAL 187 (644)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH
T ss_conf 08989999999999999973761038999977994899998775978999999999999982695899999986984999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 99984007899899999999999961499665999961809999999812994589999999999974289988764102
Q 002459 516 VDLIFKWSSGGDGVLERAAGALANLAADDKCSMEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNSAV 595 (919)
Q Consensus 516 ~~ll~~~~~~~~~~~~~a~~~L~~L~~~~~~~~~i~~~g~i~~Lv~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~ 595 (919)
+.++++ ...+.+++.++.+|++++.+++++..+.+.|+++.|+.++.+.+ ..++..++++|.+++..... .
T Consensus 188 v~lL~~--~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~-~~~~~~a~~~L~nL~~~~~~----~-- 258 (644)
T 2z6h_A 188 VNIMRT--YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS-QRLVQNCLWTLRNLSDAATK----Q-- 258 (644)
T ss_dssp HHHHTT--CCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSC-HHHHHHHHHHHHHHGGGCTT----C--
T ss_pred HHHHHC--CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCC-HHHHHHHHHHHHHHHHCCHH----H--
T ss_conf 999972--88288999999999998069501899998787999999982698-89999999999998625514----3--
Q ss_pred HHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 10014499999980799988999999999961189-10099999749889999997203899988999999999970137
Q 002459 596 GQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFD-DRNREAIAAAGGVEALVVLAQSCSNASPGLQERAAGALWGLSVS 674 (919)
Q Consensus 596 ~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~Ls~~-~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~A~~~L~~l~~~ 674 (919)
....++++.|+.++.++++.++..|+++|.+|+.. ++++..+.+.|+++.|+.++.+. ...+.++..|+++|++++..
T Consensus 259 ~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~~Lv~lL~~~-~~~~~v~~~a~~aL~nL~~~ 337 (644)
T 2z6h_A 259 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA-GDREDITEPAICALRHLTSR 337 (644)
T ss_dssp CSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHCC
T ss_conf 43635999999997389889999999999998719989999999758879999999804-98579999999999998558
Q ss_pred -C---CHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf -6---21468872089599999871499-999999999999971892328899982998999997711898999999999
Q 002459 675 -E---ANCIAIGREGGVAPLIALARSEA-EDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCSSSGSKMARFMAAL 749 (919)
Q Consensus 675 -~---~~~~~i~~~g~i~~L~~ll~~~~-~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~Lv~ll~~~~~~~~~~~a~~ 749 (919)
+ ..+..+.+.|+++.|++++.+++ +.++..++++|+|++.++.++..+++.|+++.|++++.+++ ..+|..|++
T Consensus 338 ~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~~~~~i~~~~~i~~Lv~lL~~~~-~~vr~~a~~ 416 (644)
T 2z6h_A 338 HQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAH-QDTQRRTSM 416 (644)
T ss_dssp STTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHH-HHHTTC---
T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCC-HHHHHHHHH
T ss_conf 9447999999997469189999857667457999999999997369877799997687999999985003-246667520
Q ss_pred HHHH--HHCCC-CCHHH-----HHCCCCCCC--CCEECHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHCCCCHHHHHH
Q ss_conf 9999--63799-71157-----650456666--640014579873698899999850--794678988730550466886
Q 002459 750 ALAY--MFDGR-MDEFA-----LIGTSTEST--SKCVSLDGARRMALKHIEAFVLTF--SDPQAFATAAASSAPAALTQV 817 (919)
Q Consensus 750 ~L~~--l~~~~-~~~~~-----~~~~~~~~~--~~~v~~~~~~~~~~~~i~~lv~~~--~~~~~~~~a~~a~a~~~~~~~ 817 (919)
++.+ +..+. .+.+. .+..+..+. ...+. ....+++++..+ .++..+..++.++..++. +.
T Consensus 417 al~n~~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~-------~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~-~~ 488 (644)
T 2z6h_A 417 GGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIR-------GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ-DK 488 (644)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHH-------HTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHT-SH
T ss_pred CCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH-------HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CH
T ss_conf 45530111356599999999999999961999999987-------47867999999718977899999999999972-98
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 676532014643332113679999830980578855877877514688
Q 002459 818 TERARIQEAGHLRCSGAEIGRFITMLRNPSSVLKSCAAFALLQFTIPG 865 (919)
Q Consensus 818 ~~~~~i~~~g~~~~~~~~i~~l~~~l~~~~~~~r~~aa~al~~~~~~~ 865 (919)
.....+.+.| +++.|++++.++++.+|..|+++|..+....
T Consensus 489 ~~~~~i~~~g-------~l~~L~~ll~~~~~~vr~~A~~aL~~l~~~~ 529 (644)
T 2z6h_A 489 EAAEAIEAEG-------ATAPLTELLHSRNEGVATYAAAVLFRMSEDK 529 (644)
T ss_dssp HHHHHHHHTT-------CHHHHHHHTTCSCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHCC-------CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 7789999759-------8668999876998899999999999986468
No 5
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=304.44 Aligned_cols=363 Identities=23% Similarity=0.248 Sum_probs=312.8
Q ss_pred HHHHHHH-HCHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
Q ss_conf 1689973-019999985206-99999999999997620257877542304699999709799999997029998999999
Q 002459 372 LDDFWLK-QGAGLLLSLMQS-TQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKSWREGLQSEAA 449 (919)
Q Consensus 372 ~~~~~~~-~gi~~Lv~lL~~-~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s~~~~~~~~a~ 449 (919)
...+... ++++.|+++|.+ ++++++..++.+|.+++.. +.++..+.+.|+++.|+++|+++++.++..|+
T Consensus 51 ~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~--------~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~ 122 (529)
T 1jdh_A 51 RHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH--------REGLLAIFKSGGIPALVKMLGSPVDSVLFYAI 122 (529)
T ss_dssp HHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS--------HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC--------CHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
T ss_conf 7899867346999999985489999999999999998749--------24279999849999999988399889999999
Q ss_pred HHHHHHHC-CHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHHCCHHHHHHHHHCCCCCCH
Q ss_conf 99999405-957899999809499999999308999999999999762168-6637999971679999999840078998
Q 002459 450 KAIANLSV-NAKVAKAVAEEGGINILAVLARSMNRLVAEEAAGGLWNLSVG-EEHKGAIADAGGVKALVDLIFKWSSGGD 527 (919)
Q Consensus 450 ~~L~~l~~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~-~~~~~~i~~~g~i~~L~~ll~~~~~~~~ 527 (919)
++|.+++. +++.+..+.+.|+++.|++++++++..++..++.+|.+++.. ++++..+.+.|+++.|+.+++. ....
T Consensus 123 ~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~--~~~~ 200 (529)
T 1jdh_A 123 TTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT--YTYE 200 (529)
T ss_dssp HHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH--CCCH
T ss_pred HHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHH--CCHH
T ss_conf 99999705884208999883997999999806988899999999999981897889999987998999999870--8918
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHH
Q ss_conf 99999999999961499665999961809999999812994589999999999974289988764102100144999999
Q 002459 528 GVLERAAGALANLAADDKCSMEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNSAVGQEAGALEALVQ 607 (919)
Q Consensus 528 ~~~~~a~~~L~~L~~~~~~~~~i~~~g~i~~Lv~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~i~~Lv~ 607 (919)
..++.+..+|.+++.+++++..+.+.|+++.|+.++.+++ +.++..++++|.+++..... .. ...++++.|++
T Consensus 201 ~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~~-~~~~~~a~~~L~~l~~~~~~----~~--~~~~~i~~L~~ 273 (529)
T 1jdh_A 201 KLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS-QRLVQNCLWTLRNLSDAATK----QE--GMEGLLGTLVQ 273 (529)
T ss_dssp HHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSC-HHHHHHHHHHHHHHHTTCTT----CS--CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCC-HHHHHHHHHHHHHHHCCCHH----HH--HHHHHHHHHHH
T ss_conf 8999999999998649222799998787999999986798-49999999999987628805----67--88847999999
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC-C---HHHHHH
Q ss_conf 80799988999999999961189-100999997498899999972038999889999999999701376-2---146887
Q 002459 608 LTRSPHEGVRQEAAGALWNLSFD-DRNREAIAAAGGVEALVVLAQSCSNASPGLQERAAGALWGLSVSE-A---NCIAIG 682 (919)
Q Consensus 608 ll~~~~~~~~~~a~~~L~~Ls~~-~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~A~~~L~~l~~~~-~---~~~~i~ 682 (919)
++.+++++++..|+++|++++.+ ++++..+.+.|+++.|++++.+ ...++.+++.|+.+|+|++... + .+..+.
T Consensus 274 ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~-~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~ 352 (529)
T 1jdh_A 274 LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR-AGDREDITEPAICALRHLTSRHQEAEMAQNAVR 352 (529)
T ss_dssp HTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 9839988999999999999966987889999985986999999980-697799999999999998769965899999999
Q ss_pred HCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 2089599999871499-9999999999999718923288999829989999977118989999999999999
Q 002459 683 REGGVAPLIALARSEA-EDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCSSSGSKMARFMAALALAY 753 (919)
Q Consensus 683 ~~g~i~~L~~ll~~~~-~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~Lv~ll~~~~~~~~~~~a~~~L~~ 753 (919)
+.|+++.|++++.+++ +.++..++++|+|++.++.++..+.+.|+++.|++++.+++ +.+|..|+|++.+
T Consensus 353 ~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~~~~~~~~~~~i~~L~~ll~~~~-~~v~~~a~~~l~n 423 (529)
T 1jdh_A 353 LHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAH-QDTQRRTSMGGTQ 423 (529)
T ss_dssp HTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHH-HHHC---------
T ss_pred HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHH-HHHHHHHHCCCCC
T ss_conf 8499369998735435168999999999998138323678887587789999999875-8888887405673
No 6
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=302.48 Aligned_cols=366 Identities=23% Similarity=0.250 Sum_probs=168.7
Q ss_pred CHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 91689973019999985206999999999999976202578775423046999997097999999970299989999999
Q 002459 371 GLDDFWLKQGAGLLLSLMQSTQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKSWREGLQSEAAK 450 (919)
Q Consensus 371 ~~~~~~~~~gi~~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s~~~~~~~~a~~ 450 (919)
....+...++++.|+++|++++++++..|+.+|.+++..+++ .+..+.+.|+++.|+++|++++..++..++.
T Consensus 90 ~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~-------~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~ 162 (644)
T 2z6h_A 90 GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEG-------AKMAVRLAGGLQKMVALLNKTNVKFLAITTD 162 (644)
T ss_dssp HHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTT-------HHHHHHHTTHHHHHHHGGGCCCHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH-------HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 589999859899999998089899999999999999737610-------3899997799489999877597899999999
Q ss_pred HHHHHHC-CHHHHHHHHHHCCHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCHH
Q ss_conf 9999405-957899999809499999999308-99999999999976216866379999716799999998400789989
Q 002459 451 AIANLSV-NAKVAKAVAEEGGINILAVLARSM-NRLVAEEAAGGLWNLSVGEEHKGAIADAGGVKALVDLIFKWSSGGDG 528 (919)
Q Consensus 451 ~L~~l~~-~~~~~~~i~~~g~i~~Lv~lL~~~-~~~~~~~a~~~L~~Ls~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~ 528 (919)
+|.+++. +++++..+.+.|+++.|++++++. ...+++.++.+|++++..++++..+.+.|+++.|+.++.. .+..
T Consensus 163 ~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~---~~~~ 239 (644)
T 2z6h_A 163 CLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTD---PSQR 239 (644)
T ss_dssp HHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTC---SCHH
T ss_pred HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHC---CCHH
T ss_conf 9999982695899999986984999999972882889999999999980695018999987879999999826---9889
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHH
Q ss_conf 99999999999614996659999618099999998129945899999999999742899887641021001449999998
Q 002459 529 VLERAAGALANLAADDKCSMEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNSAVGQEAGALEALVQL 608 (919)
Q Consensus 529 ~~~~a~~~L~~L~~~~~~~~~i~~~g~i~~Lv~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~i~~Lv~l 608 (919)
++..++++|.+++....... ...++++.|+.++.+.+ ++++..++++|.+|+.. +..++..+.+.|+++.|+.+
T Consensus 240 ~~~~a~~~L~nL~~~~~~~~--~~~~~i~~Lv~lL~~~d-~~v~~~a~~aL~~L~~~---~~~~~~~v~~~g~v~~Lv~l 313 (644)
T 2z6h_A 240 LVQNCLWTLRNLSDAATKQE--GMEGLLGTLVQLLGSDD-INVVTCAAGILSNLTCN---NYKNKMMVCQVGGIEALVRT 313 (644)
T ss_dssp HHHHHHHHHHHHGGGCTTCC--SCHHHHHHHHHHTTCSC-HHHHHHHHHHHHHHHTT---CHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHCC---CHHHHHHHHHCCCHHHHHHH
T ss_conf 99999999999862551434--36359999999973898-89999999999998719---98999999975887999999
Q ss_pred HCCC--CHHHHHHHHHHHHHHCCCC----CCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 0799--9889999999999611891----009999974988999999720389998899999999997013762146887
Q 002459 609 TRSP--HEGVRQEAAGALWNLSFDD----RNREAIAAAGGVEALVVLAQSCSNASPGLQERAAGALWGLSVSEANCIAIG 682 (919)
Q Consensus 609 l~~~--~~~~~~~a~~~L~~Ls~~~----~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~A~~~L~~l~~~~~~~~~i~ 682 (919)
+.+. .+.++..|+++|.+++... ..+..+.+.++++.|+++|.+ ..++.++..|+++|+|++..++++..+.
T Consensus 314 L~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~--~~~~~v~~~a~~~L~nLa~~~~~~~~i~ 391 (644)
T 2z6h_A 314 VLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHP--PSHWPLIKATVGLIRNLALCPANHAPLR 391 (644)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTST--TCCHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCC--CCCHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 98049857999999999999855894479999999974691899998576--6745799999999999736987779999
Q ss_pred HCCCHHHHHHHHCCC----------------------CHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 208959999987149----------------------9999999999999971892328899982998999997711898
Q 002459 683 REGGVAPLIALARSE----------------------AEDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCSSSGS 740 (919)
Q Consensus 683 ~~g~i~~L~~ll~~~----------------------~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~Lv~ll~~~~~ 740 (919)
+.|+++.|++++.++ +++++..++.+|++|+.++.++..+.+.|+++.|++++.+++
T Consensus 392 ~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~- 470 (644)
T 2z6h_A 392 EQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPI- 470 (644)
T ss_dssp HTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSC-
T ss_pred HCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCC-
T ss_conf 7687999999985003246667520455301113565999999999999999619999999874786799999971897-
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999963
Q 002459 741 KMARFMAALALAYMF 755 (919)
Q Consensus 741 ~~~~~~a~~~L~~l~ 755 (919)
+.++..|+++|+++.
T Consensus 471 ~~v~~~a~~aL~~l~ 485 (644)
T 2z6h_A 471 ENIQRVAAGVLCELA 485 (644)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 789999999999997
No 7
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=1.00 E-value=1 Score=302.42 Aligned_cols=458 Identities=22% Similarity=0.234 Sum_probs=364.2
Q ss_pred HHHHH-HCHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 89973-019999985206-9999999999999762025787754230469999970979999999702999899999999
Q 002459 374 DFWLK-QGAGLLLSLMQS-TQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKSWREGLQSEAAKA 451 (919)
Q Consensus 374 ~~~~~-~gi~~Lv~lL~~-~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s~~~~~~~~a~~~ 451 (919)
.+... ++++.|+++|.+ .+++++..|+.+|.+|+.. ..++..+.+.|+++.|+++|+++++.++..|+++
T Consensus 186 ~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~--------~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~a 257 (780)
T 2z6g_A 186 AIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHH--------REGLLAIFKSGGIPALVNMLGSPVDSVLFHAITT 257 (780)
T ss_dssp HHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS--------HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC--------CHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 98755083999999975799999999999999999679--------6368999875889999999759988999999999
Q ss_pred HHHHHC-CHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHHCCHHHHHHHHHCCCCCCHHH
Q ss_conf 999405-957899999809499999999308999999999999762168-663799997167999999984007899899
Q 002459 452 IANLSV-NAKVAKAVAEEGGINILAVLARSMNRLVAEEAAGGLWNLSVG-EEHKGAIADAGGVKALVDLIFKWSSGGDGV 529 (919)
Q Consensus 452 L~~l~~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~-~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~ 529 (919)
|.+++. +++.+..+.+.|+++.|++++++++..++..++.+|.+++.. ++++..+.+.|+++.|+.+++. ......
T Consensus 258 L~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~--~~~~~~ 335 (780)
T 2z6g_A 258 LHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRT--YTYEKL 335 (780)
T ss_dssp HHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTT--CCCHHH
T ss_pred HHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHC--CCHHHH
T ss_conf 999967983549999976988899999802878899999999999844792889999975988999999846--888999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf 99999999996149966599996180999999981299458999999999997428998876410210014499999980
Q 002459 530 LERAAGALANLAADDKCSMEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNSAVGQEAGALEALVQLT 609 (919)
Q Consensus 530 ~~~a~~~L~~L~~~~~~~~~i~~~g~i~~Lv~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~i~~Lv~ll 609 (919)
++.++.+|.+++.+..++..+++.|+++.|+.++.+.+ ..++..++++|.+++..... .....++++.|+.++
T Consensus 336 ~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~-~~~~~~a~~~L~~L~~~~~~------~~~~~~~i~~Lv~lL 408 (780)
T 2z6g_A 336 LWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS-QRLVQNCLWTLRNLSDAATK------QEGMEGLLGTLVQLL 408 (780)
T ss_dssp HHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSC-HHHHHHHHHHHHHHHTTCTT------CSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCHH------HHHHHHHHHHHHHHH
T ss_conf 99999999984317378999998065999999871776-49999999999998523443------445644999999997
Q ss_pred CCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC-CC---HHHHHHHC
Q ss_conf 799988999999999961189-10099999749889999997203899988999999999970137-62---14688720
Q 002459 610 RSPHEGVRQEAAGALWNLSFD-DRNREAIAAAGGVEALVVLAQSCSNASPGLQERAAGALWGLSVS-EA---NCIAIGRE 684 (919)
Q Consensus 610 ~~~~~~~~~~a~~~L~~Ls~~-~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~A~~~L~~l~~~-~~---~~~~i~~~ 684 (919)
.+.++.++..|+++|.+|+.. ++++..+.+.|+++.|++++... .....++..|+++|++++.. .+ .+..+...
T Consensus 409 ~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~-~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~ 487 (780)
T 2z6g_A 409 GSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA-GDREDITEPAICALRHLTSRHQDAEMAQNAVRLH 487 (780)
T ss_dssp TCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 499989999999999999858888899999878999999999713-9878999999999999874585279999999975
Q ss_pred CCHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH--HHCCC-CC
Q ss_conf 89599999871499-9999999999999718923288999829989999977118989999999999999--63799-71
Q 002459 685 GGVAPLIALARSEA-EDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCSSSGSKMARFMAALALAY--MFDGR-MD 760 (919)
Q Consensus 685 g~i~~L~~ll~~~~-~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~Lv~ll~~~~~~~~~~~a~~~L~~--l~~~~-~~ 760 (919)
|+++.|+.++.+++ +.++..++++|+|++.++.++..+.+.|+++.|++++.+++ ..++..|++++.+ +..+. .+
T Consensus 488 ~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~~~~~~~i~~~g~i~~Lv~lL~~~~-~~~~~~aa~al~nq~~~~~~~~~ 566 (780)
T 2z6g_A 488 YGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAH-QDTQRRTSMGGTQQQFVEGVRME 566 (780)
T ss_dssp TCHHHHHHTTSTTCCHHHHHHHHHHHHHHHSSHHHHHHHHHTTHHHHHHHHHHHHH-HHHHHTTC------CCSTTCCHH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCC-HHHHHHHHHCCCCCHHHCCCCHH
T ss_conf 88899999856887678999999999998539887999997888999999987201-56777875224541123046769
Q ss_pred HHH-----HHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 157-----650456666640014579873698899999850--7946789887305504668866765320146433321
Q 002459 761 EFA-----LIGTSTESTSKCVSLDGARRMALKHIEAFVLTF--SDPQAFATAAASSAPAALTQVTERARIQEAGHLRCSG 833 (919)
Q Consensus 761 ~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~i~~lv~~~--~~~~~~~~a~~a~a~~~~~~~~~~~~i~~~g~~~~~~ 833 (919)
.+. +++.+..+. .. .......+.|++|+..+ .++.++..++.++..++. +......+.+.|
T Consensus 567 ~v~~~a~~aL~~La~~~----~~-~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~-~~~~~~~i~~~g------ 634 (780)
T 2z6g_A 567 EIVEACTGALHILARDI----HN-RIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ-DKEAAEAIEAEG------ 634 (780)
T ss_dssp HHHHHHHHHHHHHTTSH----HH-HHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHT-SHHHHHHHHHTT------
T ss_pred HHHHHHHHHHHHHHCCH----HH-HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHCC------
T ss_conf 99999999999983584----66-9999877868999999769988999999999999955-988889999778------
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
Q ss_conf 136799998309805788558778775146
Q 002459 834 AEIGRFITMLRNPSSVLKSCAAFALLQFTI 863 (919)
Q Consensus 834 ~~i~~l~~~l~~~~~~~r~~aa~al~~~~~ 863 (919)
+++.|+++++++++.+|..|++||..+..
T Consensus 635 -~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~ 663 (780)
T 2z6g_A 635 -ATAPLTELLHSRNEGVATYAAAVLFRMSE 663 (780)
T ss_dssp -CHHHHHHGGGCSCHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf -79999998758998999999999999971
No 8
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=1.00 E-value=1 Score=301.62 Aligned_cols=411 Identities=17% Similarity=0.191 Sum_probs=344.1
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCC-CCHHHHHHHHHHHHHHHC-C
Q ss_conf 99999852069999999999999762025787754230469999970979999999702-999899999999999405-9
Q 002459 381 AGLLLSLMQSTQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKS-WREGLQSEAAKAIANLSV-N 458 (919)
Q Consensus 381 i~~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s-~~~~~~~~a~~~L~~l~~-~ 458 (919)
|+.+|+.+++++++.|..|+..++++...+.. ...+.+++.|++|.|+++|++ +++.+|..|+++|.|++. +
T Consensus 59 i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~------ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~ 132 (510)
T 3ul1_B 59 VEDIVKGINSNNLESQLQATQAARKLLSREKQ------PPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGT 132 (510)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSC------CCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC------CHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999984599999999999999998657889------629999988888999998778998999999999999996499
Q ss_pred HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHHCCHHHHHHHHHCCC--CCCHHHHHHHHH
Q ss_conf 57899999809499999999308999999999999762168-663799997167999999984007--899899999999
Q 002459 459 AKVAKAVAEEGGINILAVLARSMNRLVAEEAAGGLWNLSVG-EEHKGAIADAGGVKALVDLIFKWS--SGGDGVLERAAG 535 (919)
Q Consensus 459 ~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~-~~~~~~i~~~g~i~~L~~ll~~~~--~~~~~~~~~a~~ 535 (919)
++.+..+++.|+||.|+++|++++..+++.|+++|+||+.+ ++.+..+.+.|++++|+.++.... .......+.+++
T Consensus 133 ~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~ 212 (510)
T 3ul1_B 133 SEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTW 212 (510)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999788799999988699989999999999999718899999999869817999999734610445999999999
Q ss_pred HHHHHHCCCCCHH-HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCH
Q ss_conf 9999614996659-999618099999998129945899999999999742899887641021001449999998079998
Q 002459 536 ALANLAADDKCSM-EVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNSAVGQEAGALEALVQLTRSPHE 614 (919)
Q Consensus 536 ~L~~L~~~~~~~~-~i~~~g~i~~Lv~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~i~~Lv~ll~~~~~ 614 (919)
++.+++....... .....++++.|+.++.+.+ ++++..++++|.+|+.. ..+....+...|+++.|+.++.+.+.
T Consensus 213 ~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~-~~v~~~A~~aL~~L~~~---~~~~~~~i~~~g~i~~Lv~lL~~~~~ 288 (510)
T 3ul1_B 213 TLSNLCRNKNPAPPLDAVEQILPTLVRLLHHND-PEVLADSCWAISYLTDG---PNERIEMVVKKGVVPQLVKLLGATEL 288 (510)
T ss_dssp HHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSC-HHHHHHHHHHHHHHTSS---CHHHHHHHHTTTCHHHHHHHHTCSCH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHC---HHHHHHHHHHCCCCHHHHHHHCCCCH
T ss_conf 999875311102579999769999999981687-99999999999998602---15667899863651255566138871
Q ss_pred HHHHHHHHHHHHHCCC-CCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHCCCHHHHHH
Q ss_conf 8999999999961189-10099999749889999997203899988999999999970137-621468872089599999
Q 002459 615 GVRQEAAGALWNLSFD-DRNREAIAAAGGVEALVVLAQSCSNASPGLQERAAGALWGLSVS-EANCIAIGREGGVAPLIA 692 (919)
Q Consensus 615 ~~~~~a~~~L~~Ls~~-~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~A~~~L~~l~~~-~~~~~~i~~~g~i~~L~~ 692 (919)
.++..++++|+|++.. +..+..+.+.|+++.|+.++.+ .+..++..|+++|+|++.. +..+..+.+.|+++.|+.
T Consensus 289 ~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~---~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~ 365 (510)
T 3ul1_B 289 PIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTN---PKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVG 365 (510)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTC---SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC---CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
T ss_conf 342688999988623778888887612412788887249---98899999999999997084989999885387889999
Q ss_pred HHCCCCHHHHHHHHHHHHHHCC--CCCCHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCC
Q ss_conf 8714999999999999999718--92328899982998999997711898999999999999963799711576504566
Q 002459 693 LARSEAEDVHETAAGALWNLAF--NPGNALRIVEEGGVPALVHLCSSSGSKMARFMAALALAYMFDGRMDEFALIGTSTE 770 (919)
Q Consensus 693 ll~~~~~~v~~~a~~aL~~l~~--~~~~~~~l~~~~~i~~Lv~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~ 770 (919)
++.+++.+++..|+++|.|++. +++....+++.|+++.|++++.+.+ +.++..+..+|.++..-..
T Consensus 366 lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d-~~i~~~~L~aL~nil~~~~----------- 433 (510)
T 3ul1_B 366 VLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKD-TKIIQVILDAISNIFQAAE----------- 433 (510)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSC-HHHHHHHHHHHHHHHHHHH-----------
T ss_pred HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHH-----------
T ss_conf 9738988999999999999870699999999997978999999866999-9999999999999999857-----------
Q ss_pred CCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHH
Q ss_conf 66640014579873698899999850794678988730550466886676532014643332113679999830980578
Q 002459 771 STSKCVSLDGARRMALKHIEAFVLTFSDPQAFATAAASSAPAALTQVTERARIQEAGHLRCSGAEIGRFITMLRNPSSVL 850 (919)
Q Consensus 771 ~~~~~v~~~~~~~~~~~~i~~lv~~~~~~~~~~~a~~a~a~~~~~~~~~~~~i~~~g~~~~~~~~i~~l~~~l~~~~~~~ 850 (919)
...+.. .. ...+.++| ++..|..+..+++..+
T Consensus 434 ------------------------~~~~~~---~~--------------~~~iee~g-------gl~~ie~Lq~~~n~~i 465 (510)
T 3ul1_B 434 ------------------------KLGETE---KL--------------SIMIEECG-------GLDKIEALQRHENESV 465 (510)
T ss_dssp ------------------------TTTCHH---HH--------------HHHHHHTT-------HHHHHHHGGGCSSHHH
T ss_pred ------------------------HCCCHH---HH--------------HHHHHHCC-------CHHHHHHHHCCCCHHH
T ss_conf ------------------------426658---99--------------99999868-------5999999875998999
Q ss_pred HHHHHHHH-HHHCCC
Q ss_conf 85587787-751468
Q 002459 851 KSCAAFAL-LQFTIP 864 (919)
Q Consensus 851 r~~aa~al-~~~~~~ 864 (919)
+.+|...+ .-|...
T Consensus 466 ~~~A~~iie~yf~~~ 480 (510)
T 3ul1_B 466 YKASLNLIEKYFSVE 480 (510)
T ss_dssp HHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999977985
No 9
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=301.27 Aligned_cols=441 Identities=22% Similarity=0.209 Sum_probs=360.1
Q ss_pred HHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-CCCHHHHHHHHCCC-CHHHHHHHHHHHH
Q ss_conf 973019999985206999999999999976202578775423046999997-09799999997029-9989999999999
Q 002459 376 WLKQGAGLLLSLMQSTQEDVQERAATGLATFVVINDENASIDCGRAEAVMK-DGGIRLLLDLAKSW-REGLQSEAAKAIA 453 (919)
Q Consensus 376 ~~~~gi~~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~-~g~i~~Li~~L~s~-~~~~~~~a~~~L~ 453 (919)
...++++.|+++|+++++.++..|+.+|.+++..++ ++..+.. .|+++.|+++|.++ ++.++..++.+|.
T Consensus 14 ~~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~--------~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~ 85 (529)
T 1jdh_A 14 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA--------SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLH 85 (529)
T ss_dssp ---CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHH--------HHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC--------CHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 567349999998678998999999999999874781--------178998673469999999854899999999999999
Q ss_pred HHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 9405957899999809499999999308999999999999762168-663799997167999999984007899899999
Q 002459 454 NLSVNAKVAKAVAEEGGINILAVLARSMNRLVAEEAAGGLWNLSVG-EEHKGAIADAGGVKALVDLIFKWSSGGDGVLER 532 (919)
Q Consensus 454 ~l~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~Ls~~-~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~ 532 (919)
+++.+++++..+.+.|+++.|+++++++++.++..++++|++++.+ ++.+..+.+.|+++.|+.++.+ .+..++..
T Consensus 86 ~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~---~~~~~~~~ 162 (529)
T 1jdh_A 86 NLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK---TNVKFLAI 162 (529)
T ss_dssp HHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGC---CCHHHHHH
T ss_pred HHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHC---CCHHHHHH
T ss_conf 987492427999984999999998839988999999999999705884208999883997999999806---98889999
Q ss_pred HHHHHHHHHCC-CCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHCC
Q ss_conf 99999996149-96659999618099999998129945899999999999742899887641021001449999998079
Q 002459 533 AAGALANLAAD-DKCSMEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNSAVGQEAGALEALVQLTRS 611 (919)
Q Consensus 533 a~~~L~~L~~~-~~~~~~i~~~g~i~~Lv~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~i~~Lv~ll~~ 611 (919)
++.+|.+++.. ++++..+.+.|+++.|+.++++++....+..++.+|.+++. ++.++..+.+.|+++.|+.++.+
T Consensus 163 ~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~----~~~~~~~~~~~g~~~~L~~ll~~ 238 (529)
T 1jdh_A 163 TTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV----CSSNKPAIVEAGGMQALGLHLTD 238 (529)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT----STTHHHHHHHTTHHHHHHTTTTS
T ss_pred HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHC----CCCCHHHHHHCCCHHHHHHHHHC
T ss_conf 99999999818978899999879989999998708918899999999999864----92227999987879999999867
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC-CCHHHHHHHCCCHHHH
Q ss_conf 998899999999996118910099999749889999997203899988999999999970137-6214688720895999
Q 002459 612 PHEGVRQEAAGALWNLSFDDRNREAIAAAGGVEALVVLAQSCSNASPGLQERAAGALWGLSVS-EANCIAIGREGGVAPL 690 (919)
Q Consensus 612 ~~~~~~~~a~~~L~~Ls~~~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~A~~~L~~l~~~-~~~~~~i~~~g~i~~L 690 (919)
+++.++..++++|.+++.+..... ...++++.|++++.+ .+++++..|+++|++++.. ++++..+.+.|+++.|
T Consensus 239 ~~~~~~~~a~~~L~~l~~~~~~~~--~~~~~i~~L~~ll~~---~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L 313 (529)
T 1jdh_A 239 PSQRLVQNCLWTLRNLSDAATKQE--GMEGLLGTLVQLLGS---DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEAL 313 (529)
T ss_dssp SCHHHHHHHHHHHHHHHTTCTTCS--CCHHHHHHHHHHTTC---SCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCHHHH--HHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
T ss_conf 984999999999998762880567--888479999999839---988999999999999966987889999985986999
Q ss_pred HHHHCC--CCHHHHHHHHHHHHHHCCC-CC---CHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 998714--9999999999999997189-23---28899982998999997711898999999999999963799711576
Q 002459 691 IALARS--EAEDVHETAAGALWNLAFN-PG---NALRIVEEGGVPALVHLCSSSGSKMARFMAALALAYMFDGRMDEFAL 764 (919)
Q Consensus 691 ~~ll~~--~~~~v~~~a~~aL~~l~~~-~~---~~~~l~~~~~i~~Lv~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 764 (919)
++++.+ .++.++..++.+|+|++.. +. .+..+.+.|+++.|++++.++.++.++..++++++++..+.....
T Consensus 314 ~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~~~~-- 391 (529)
T 1jdh_A 314 VRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHA-- 391 (529)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHH--
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHH--
T ss_conf 999980697799999999999998769965899999999849936999873543516899999999999813832367--
Q ss_pred HCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHCCC-----------------CHHHHHH----HHHH
Q ss_conf 504566666400145798736988999998507--9467898873055-----------------0466886----6765
Q 002459 765 IGTSTESTSKCVSLDGARRMALKHIEAFVLTFS--DPQAFATAAASSA-----------------PAALTQV----TERA 821 (919)
Q Consensus 765 ~~~~~~~~~~~v~~~~~~~~~~~~i~~lv~~~~--~~~~~~~a~~a~a-----------------~~~~~~~----~~~~ 821 (919)
.+. ..+.++.++..+. ++..+..++.++. ..++.++ ....
T Consensus 392 ----------~~~-------~~~~i~~L~~ll~~~~~~v~~~a~~~l~n~~~~~~~~~~~i~~~~~~al~~L~~~~~~~~ 454 (529)
T 1jdh_A 392 ----------PLR-------EQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRI 454 (529)
T ss_dssp ----------HHH-------HTTHHHHHHHHHHHHHHHHC-----------CBTTBCHHHHHHHHHHHHHHHTTSHHHHH
T ss_pred ----------HHH-------HCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf ----------888-------758778999999987588888874056735665046489999999999999960922789
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
Q ss_conf 32014643332113679999830980578855877877514
Q 002459 822 RIQEAGHLRCSGAEIGRFITMLRNPSSVLKSCAAFALLQFT 862 (919)
Q Consensus 822 ~i~~~g~~~~~~~~i~~l~~~l~~~~~~~r~~aa~al~~~~ 862 (919)
.+.+.| ++++|++++.++++.++..|++++.++.
T Consensus 455 ~l~~~~-------~v~~l~~ll~~~~~~v~~~a~~~l~~l~ 488 (529)
T 1jdh_A 455 VIRGLN-------TIPLFVQLLYSPIENIQRVAAGVLCELA 488 (529)
T ss_dssp HHHHTT-------CHHHHHHGGGCSCHHHHHHHHHHHHHHT
T ss_pred HHHCCC-------CCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 976068-------7508999981882699999999999984
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=1.00 E-value=1 Score=298.83 Aligned_cols=396 Identities=20% Similarity=0.210 Sum_probs=284.4
Q ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-C
Q ss_conf 199999852069999999999999762025787754230469999970979999999702999899999999999405-9
Q 002459 380 GAGLLLSLMQSTQEDVQERAATGLATFVVINDENASIDCGRAEAVMKDGGIRLLLDLAKSWREGLQSEAAKAIANLSV-N 458 (919)
Q Consensus 380 gi~~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~i~~~g~i~~Li~~L~s~~~~~~~~a~~~L~~l~~-~ 458 (919)
.++.|+++|+++++++|..|+.+|.+++..++. .+..+.+.|++|.|+++|+++++.++..|+++|.+++. +
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~-------~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~ 75 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-------AKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 75 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSS-------HHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH-------HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 889999987799989999999999999769857-------8999998689899999876999999999999999984498
Q ss_pred HHHHHHHHHHCCHHHHHHHHH-CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCC------CC-------
Q ss_conf 578999998094999999993-0899999999999976216866379999716799999998400------78-------
Q 002459 459 AKVAKAVAEEGGINILAVLAR-SMNRLVAEEAAGGLWNLSVGEEHKGAIADAGGVKALVDLIFKW------SS------- 524 (919)
Q Consensus 459 ~~~~~~i~~~g~i~~Lv~lL~-~~~~~~~~~a~~~L~~Ls~~~~~~~~i~~~g~i~~L~~ll~~~------~~------- 524 (919)
++++..+++.|++++|+++|+ +++.++++.++++|+||+.+++++..+.+ |++++|+.++..+ ..
T Consensus 76 ~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~ 154 (457)
T 1xm9_A 76 TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREV 154 (457)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------C
T ss_pred HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH-CCHHHHHHHHHCCCCCCCCCCCCHHCCC
T ss_conf 777999997698999999986199889999999999998558776899995-5399999998243344455763010122
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCHHHHHHC-CHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
Q ss_conf 99899999999999961499665999961-8099999998129-----94589999999999974289988764102100
Q 002459 525 GGDGVLERAAGALANLAADDKCSMEVALA-GGVHALVMLARSC-----KFEGVQEQAARALANLAAHGDSNSNNSAVGQE 598 (919)
Q Consensus 525 ~~~~~~~~a~~~L~~L~~~~~~~~~i~~~-g~i~~Lv~ll~~~-----~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~ 598 (919)
.+..+.+.|+++|.||+.+++++..+.+. |+++.|+.++.++ .+..+.++++.+|++++...+ .. .
T Consensus 155 ~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~------~~--~ 226 (457)
T 1xm9_A 155 VDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLD------AE--V 226 (457)
T ss_dssp CCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHH------HH--S
T ss_pred CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHH------CC--C
T ss_conf 548999999999999826999999999868979999999996231357754889999999996603221------03--7
Q ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHH----------------CCCCCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHH
Q ss_conf 14499999980799988999999999961----------------18910099999749889999997203899988999
Q 002459 599 AGALEALVQLTRSPHEGVRQEAAGALWNL----------------SFDDRNREAIAAAGGVEALVVLAQSCSNASPGLQE 662 (919)
Q Consensus 599 ~~~i~~Lv~ll~~~~~~~~~~a~~~L~~L----------------s~~~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~ 662 (919)
..+...+...+..... ......++.+. ...++..+.+.+.++++.|+.+|.+ ..++.+++
T Consensus 227 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~--~~~~~~~e 302 (457)
T 1xm9_A 227 PTRYRQLEYNARNAYT--EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK--SKKDATLE 302 (457)
T ss_dssp CCHHHHHHHTC------------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHH--CCCHHHHH
T ss_pred CCHHHHCCCCCCCCCC--CCCCCCHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH--CCCHHHHH
T ss_conf 5212111134321235--6666541202225666244457751125570478999670259999999860--58799999
Q ss_pred HHHHHHHHCCCCC-C----H-HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHH
Q ss_conf 9999999701376-2----1-46887208959999987149999999999999997189232889998299899999771
Q 002459 663 RAAGALWGLSVSE-A----N-CIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVPALVHLCS 736 (919)
Q Consensus 663 ~A~~~L~~l~~~~-~----~-~~~i~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~l~~~~~i~~Lv~ll~ 736 (919)
.|+++|+|++... . . +..+.+.|+++.|++++.+++.+++..|+++|.|++.+++++..+. .++++.|+++|.
T Consensus 303 ~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~~~~~~~i~-~~~i~~Lv~lL~ 381 (457)
T 1xm9_A 303 ACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMG-NQVFPEVTRLLT 381 (457)
T ss_dssp HHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGGHHHHH-HHTHHHHHHTTT
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHCC
T ss_conf 9999988860576763288999999873994699998717977699999999999814977899999-751699998665
Q ss_pred CCCC-----HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf 1898-----99999999999996379971157650456666640014579873698899999850794678988730550
Q 002459 737 SSGS-----KMARFMAALALAYMFDGRMDEFALIGTSTESTSKCVSLDGARRMALKHIEAFVLTFSDPQAFATAAASSAP 811 (919)
Q Consensus 737 ~~~~-----~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~lv~~~~~~~~~~~a~~a~a~ 811 (919)
++++ +.+...++.+++++..+..
T Consensus 382 ~~~~~~~~~~~v~~~~l~~l~ni~~~~~---------------------------------------------------- 409 (457)
T 1xm9_A 382 SHTGNTSNSEDILSSACYTVRNLMASQP---------------------------------------------------- 409 (457)
T ss_dssp SCCSCSTTHHHHHHHHHHHHHHHHTTCT----------------------------------------------------
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCH----------------------------------------------------
T ss_conf 8788888858899999999999986398----------------------------------------------------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC-CHHHHHHHHHHHHHH
Q ss_conf 46688667653201464333211367999983098-057885587787751
Q 002459 812 AALTQVTERARIQEAGHLRCSGAEIGRFITMLRNP-SSVLKSCAAFALLQF 861 (919)
Q Consensus 812 ~~~~~~~~~~~i~~~g~~~~~~~~i~~l~~~l~~~-~~~~r~~aa~al~~~ 861 (919)
.....+.++| ++++|+++++++ ++.++..|.+.|..+
T Consensus 410 ------~~~~~i~~~g-------~l~~L~~L~~~~~~~~i~~~A~~~L~~~ 447 (457)
T 1xm9_A 410 ------QLAKQYFSSS-------MLNNIINLCRSSASPKAAEAARLLLSDM 447 (457)
T ss_dssp ------HHHHHHCCHH-------HHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred ------HHHHHHHHCC-------CHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf ------9899999769-------8899999973799679999999999999
Done!